BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020928
(319 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 290 bits (742), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 149/316 (47%), Positives = 209/316 (66%), Gaps = 4/316 (1%)
Query: 4 AVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGIS 63
A C +V Y + R A+FIVK PMVIGHE +G + +VG VK L+ GDRVA+EPG+
Sbjct: 36 AYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVP 95
Query: 64 CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS 123
C C CK G YNLCP++ F +PP +G+LA VH A C+KLPDNVSLEEGA+ EPLS
Sbjct: 96 CRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLS 155
Query: 124 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 183
VGVHACRRA V T V+++G+GPIGLV++LAA+A+GA ++ T +RL +A+N GAD
Sbjct: 156 VGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGAD 214
Query: 184 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 243
T V E+ + + +I++A+G +V+ DC G +K ++ +N TR GG + L+G+
Sbjct: 215 VTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS 274
Query: 244 TEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 303
+TV L A ARE+D+ +FRY + +P+ +E + SG+ +VK L+TH F Q DAF
Sbjct: 275 QMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVKQLVTHSFKLEQ--TVDAF 332
Query: 304 EIS-AQGGNAIKVMFN 318
E + + N IKVM +
Sbjct: 333 EAARKKADNTIKVMIS 348
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/310 (46%), Positives = 198/310 (63%), Gaps = 5/310 (1%)
Query: 9 CMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCS 68
C +V Y + R NFIVKKPMV+GHE +G +E+VGS VK L+ GDRVA+EPG +
Sbjct: 44 CGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDE 103
Query: 69 LCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA 128
CK G YNL P + F +PP +G+L H A CYKLPDNV+ EEGA+ EPLSVG+HA
Sbjct: 104 FCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHA 163
Query: 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 188
CRR V V++ G+GPIG+VTLL A+A GA ++++TD+ RLS A+ +GAD ++
Sbjct: 164 CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI 223
Query: 189 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV 248
S E K++ +G +V+ +C G + ++ + ATR GG + L+GL TV
Sbjct: 224 SK--ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTV 281
Query: 249 ALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ 308
L AA REVD+ G+FRY +TWP+ I L S ++VKPL+THRF +K +E AFE + +
Sbjct: 282 PLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLVTHRFPL-EKALE-AFE-TFK 338
Query: 309 GGNAIKVMFN 318
G +K+M
Sbjct: 339 KGLGLKIMLK 348
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 274 bits (700), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 142/310 (45%), Positives = 198/310 (63%), Gaps = 5/310 (1%)
Query: 9 CMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCS 68
C +V Y Q R +F+VKKPMV+GHE +G + +VGS V+ L+ GDRVA++PG
Sbjct: 43 CGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDE 102
Query: 69 LCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA 128
CK G YNL P + F +PP +G+L H A CYKLPDNV+ EEGA+ EPLSVG+HA
Sbjct: 103 FCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHA 162
Query: 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 188
CRRA V V++ G+GPIGLV LLAA+A GA ++++TD+ RLS A+ +GAD ++
Sbjct: 163 CRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEI 222
Query: 189 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV 248
S E + K++ +GS +V+ +C G + ++ + AT GG + L+GL +V
Sbjct: 223 SN--ESPEEIAKKVEGLLGSKPEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSV 280
Query: 249 ALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ 308
L AA REVD+ G+FRY +TWP+ I L S ++VKPL+THRF +K +E AFE S +
Sbjct: 281 PLVHAATREVDIKGVFRYCNTWPMAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKK 338
Query: 309 GGNAIKVMFN 318
G +KVM
Sbjct: 339 -GLGLKVMIK 347
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 270 bits (691), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/301 (46%), Positives = 191/301 (63%), Gaps = 4/301 (1%)
Query: 9 CMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCS 68
C +V Y + R NFIVKKP V+GHE +G +E+VGS VK L+ GDRVA+EPG +
Sbjct: 44 CGSDVHYWEYGRIGNFIVKKPXVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDE 103
Query: 69 LCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA 128
CK G YNL P + F +PP +G+L H A CYKLPDNV+ EEGA+ EPLSVG+HA
Sbjct: 104 FCKXGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHA 163
Query: 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 188
CRR V V++ G+GPIG VTLL A+A GA ++++TD+ RLS A+ +GAD ++
Sbjct: 164 CRRGGVTLGHKVLVCGAGPIGXVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQI 223
Query: 189 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV 248
S E K++ +G +V+ +C G + ++ + ATR GG + L+GL TV
Sbjct: 224 SK--ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTV 281
Query: 249 ALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ 308
L AA REVD+ G+FRY +TWP+ I L S ++VKPL+THRF +K +E AFE +
Sbjct: 282 PLLHAAIREVDIKGVFRYCNTWPVAISXLASKSVNVKPLVTHRFPL-EKALE-AFETFKK 339
Query: 309 G 309
G
Sbjct: 340 G 340
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/316 (37%), Positives = 176/316 (55%), Gaps = 8/316 (2%)
Query: 6 TAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCG 65
T C +V + + IV+ V+GHE AG + V VKS++VGDRVA+EP + C
Sbjct: 50 TGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICN 109
Query: 66 HCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG 125
C C G YN C + F +PP G L V HPA C+K+ N+S E GAM EPLSV
Sbjct: 110 ACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GNMSYENGAMLEPLSVA 168
Query: 126 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 185
+ +RA V V+I G+GPIGL+T+L A+A GA ++ITD+D RL A+ + E
Sbjct: 169 LAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEV 227
Query: 186 AKVSTDIEDVDTDVGKIQNAMGSGID--VSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 243
+ + KI + G GI+ V+ +C G + +++ A+ A + GGKV +IG+ K
Sbjct: 228 VTHKVERLSAEESAKKIVESFG-GIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGK 286
Query: 244 TEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 303
E+ + A+ REVD+ +RY +TWP I + +G +D+ L+THRF ++ AF
Sbjct: 287 NEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPL--EDALKAF 344
Query: 304 EISAQ-GGNAIKVMFN 318
E ++ AIKV
Sbjct: 345 ETASDPKTGAIKVQIQ 360
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 168/318 (52%), Gaps = 13/318 (4%)
Query: 6 TAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCG 65
T+ C ++ + A +K P + GHE AG + E+G V+ +EVGD V++E I CG
Sbjct: 38 TSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCG 97
Query: 66 HCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG 125
C C+ G Y++C + FG T+G A V PA+ +K P ++ E + EPL
Sbjct: 98 KCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNA 156
Query: 126 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 185
V + ++ V+I G+GP+GL+ + A+A GA +I+++ R +A+ +GAD
Sbjct: 157 VDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV 215
Query: 186 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE 245
++ EDV +V I + G+G+DV + G K + L A P G+V L+GL +
Sbjct: 216 --INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGK 271
Query: 246 MTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIED 301
+T+ + + + GI TW L+SGK+++ P+ITH++ GF + E+
Sbjct: 272 VTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDK--YEE 329
Query: 302 AFEISAQGGNAIKVMFNL 319
AFE+ + G KV+F L
Sbjct: 330 AFELX-RAGKTGKVVFXL 346
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 154 bits (388), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 168/318 (52%), Gaps = 13/318 (4%)
Query: 6 TAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCG 65
T+ C ++ + A +K P + GHE AG + E+G V+ +EVGD V++E I CG
Sbjct: 39 TSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCG 98
Query: 66 HCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG 125
C C+ G Y++C + FG T+G A V PA+ +K P ++ E + EPL
Sbjct: 99 KCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNA 157
Query: 126 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 185
V + ++ V+I G+GP+GL+ + A+A GA +I+++ R +A+ +GAD
Sbjct: 158 VDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV 216
Query: 186 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE 245
++ EDV +V I + G+G+DV + G K + L A P G+V L+GL +
Sbjct: 217 --INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGK 272
Query: 246 MTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIED 301
+T+ + + + GI TW L+SGK+++ P+ITH++ GF + E+
Sbjct: 273 VTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFDK--YEE 330
Query: 302 AFEISAQGGNAIKVMFNL 319
AFE+ + G KV+F L
Sbjct: 331 AFELX-RAGKTGKVVFXL 347
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 162/316 (51%), Gaps = 12/316 (3%)
Query: 6 TAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCG 65
T+ C ++ + A +K P ++GHE AG + EVG V+ L+VGD +++E I CG
Sbjct: 39 TSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGDYISVETHIVCG 98
Query: 66 HCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG 125
C CK Y++C + FG +G AH + PAK +K P ++ E A+ EPL
Sbjct: 99 KCYACKHNRYHVCQNTKIFGV-DMDGVFAHYAIVPAKNAWKNPKDMPPEYAALQEPLGNA 157
Query: 126 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 185
V + + +I G+GP+GL+ + A+A GA +I+++ R +A+ +GAD
Sbjct: 158 VDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGAYPVIVSEPSEFRRKLAKKVGADYV 216
Query: 186 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE 245
V+ ED V I + G+G++V + G K + L A PGG+V L+GL E
Sbjct: 217 --VNPFEEDPVKFVMDITD--GAGVEVFLEFSGAPKALEQGLKAVTPGGRVSLLGLFPRE 272
Query: 246 MTV---ALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIED 301
+T+ L A EV I TW ++SGK+++ P+ITH++ GF + E+
Sbjct: 273 VTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQSGKLNLDPIITHKYKGFDK--FEE 330
Query: 302 AFEISAQGGNAIKVMF 317
AFE+ G V F
Sbjct: 331 AFELMRAGKTGKVVFF 346
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 149/296 (50%), Gaps = 13/296 (4%)
Query: 26 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 85
++ P+V GHE +G++E VG V+ +VGD V+LE I C C C+ G+Y++C + G
Sbjct: 55 IRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILG 114
Query: 86 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS 145
+G A VV PA+ + P ++ E A+ EP VH + +V+I G+
Sbjct: 115 V-DRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGA 173
Query: 146 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 205
GPIGL+ + RA GA I+++D + RL+ AR + D+ +V ++
Sbjct: 174 GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEV------VRRV 227
Query: 206 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIF 264
GSG++V + G + + L A PGG+ ++G+ + L R + GI
Sbjct: 228 TGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIA 287
Query: 265 --RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 318
R TW + SG++D+ PL+THR ++ +AF + A G A+KV+ +
Sbjct: 288 GRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSR--YREAFGLLAS-GQAVKVILD 340
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 5/283 (1%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D+ + F P+ +GHE GI+ E GS V+ + G R+ +P ISCG C C+AG
Sbjct: 63 DRHLLHGEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRV 122
Query: 76 NLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVG 135
NLC +R G +G A V+ P K +++P + GA CEPL+ +H + +
Sbjct: 123 NLCRNLRAIGI-HRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIK 181
Query: 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV 195
+ V I+G G IGL+T+ AR GA +I++ + +A +GA TA V DV
Sbjct: 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA--TATVDPSAGDV 239
Query: 196 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP--A 253
+ + G+DV +C G +T+ + + GG V ++G+ V + P
Sbjct: 240 VEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDI 299
Query: 254 AAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQ 296
RE+ V+G F + + +G I++ I+ R +
Sbjct: 300 LFRELRVLGSFINPFVHRRAADLVATGAIEIDRXISRRISLDE 342
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 132/290 (45%), Gaps = 10/290 (3%)
Query: 17 QTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN 76
R N K P VIGHE G+I+ VG V+S VG+RVA++P +SCGHC C G N
Sbjct: 62 HIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPN 121
Query: 77 LCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP 136
+C + G +G + V PAK +K+P+ V+ + M EP ++ +
Sbjct: 122 VCTTLAVLGV-HADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTE 180
Query: 137 ETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV 195
V++ G+GPIGL + + + +I+ D +RL A+ GAD I +
Sbjct: 181 NDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWA------INNS 234
Query: 196 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAA 255
T +G+ G + D + A+ P ++ L+G + V
Sbjct: 235 QTPLGESFAEKGIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITG 294
Query: 256 REVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 305
+E+ + + +P+ I++L G I + LITH F F + + DA +
Sbjct: 295 KELSIFSSRLNANKFPVVIDWLSKGLIKPEKLITHTFDF--QHVADAISL 342
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 136/277 (49%), Gaps = 18/277 (6%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 88
P+ +GHE +G I+ VGS V L GD VA P + C C C G Y+ C + F GS
Sbjct: 54 PITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSR- 112
Query: 89 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPI 148
+G A +V K + LP ++ +E+GA EP++VG+HA A NV+I+G+G I
Sbjct: 113 RDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTI 172
Query: 149 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 208
GL+ + A A GA + D+ ++L++A++ GA +T S + ++Q+ +
Sbjct: 173 GLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSS------EMSAPQMQSVLRE 226
Query: 209 --GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM---TVALTPAAAREVDVIGI 263
+ + G +T+ A+ P ++ L+G ++ + +E+ VIG
Sbjct: 227 LRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGS 286
Query: 264 F-RYRSTWP-----LCIEFLRSGKIDVKPLITHRFGF 294
+ Y S WP L K+ ++PLI HR F
Sbjct: 287 WMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSF 323
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 122/270 (45%), Gaps = 19/270 (7%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFF 84
K P++ GHE GI+EEVG V L+VGDRV + P + +CGHC C +G LC +
Sbjct: 54 KLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNA 112
Query: 85 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMI 142
G +G A A K+PDN+S EE A C ++ A + P V I
Sbjct: 113 GY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAI 170
Query: 143 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 202
G G +G V + A+A G ++ D+ ++L +A+ LGAD + + D K
Sbjct: 171 YGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLV------VNPLKEDAAKF 223
Query: 203 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 262
G+ + +A N+ R GG L+GL EM + + + +IG
Sbjct: 224 MKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIG 283
Query: 263 -IFRYRSTWPLCIEFLRSGK----IDVKPL 287
I R ++F GK I+V+PL
Sbjct: 284 SIVGTRKDLQEALQFAAEGKVKTIIEVQPL 313
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 139/279 (49%), Gaps = 10/279 (3%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGIS-CGHCSLCKAGS 74
D + +F K V+GHE GI++E+G++V SL+VGDRV++ CGHC C +G+
Sbjct: 42 DLHVAAGDFGNKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGN 101
Query: 75 YNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-ACRRAN 133
C E++ G +G +A + + A K+PD + E + V + A + +
Sbjct: 102 ETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSG 160
Query: 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 193
V P +I G+G +G + + A+ ++I D++ +L++A+ +GAD T S D+
Sbjct: 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTIN-SGDVN 219
Query: 194 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA 253
VD ++ KI G G+ + C A+ + +P GK+ + + TEMT+++
Sbjct: 220 PVD-EIKKITG--GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTV 276
Query: 254 AAREVDVIG-IFRYRSTWPLCIEFLRSGKIDVKPLITHR 291
V+V G + R +F GK VKP++ R
Sbjct: 277 VFDGVEVAGSLVGTRLDLAEAFQFGAEGK--VKPIVATR 313
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 121/270 (44%), Gaps = 19/270 (7%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFF 84
K P++ GHE GI+EEVG V L+VGDRV + P + +CGHC C +G LC +
Sbjct: 54 KLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNA 112
Query: 85 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMI 142
G +G A A K+PDN+S EE A C ++ A + P V I
Sbjct: 113 GY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAI 170
Query: 143 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 202
G G G V + A+A G ++ D+ ++L +A+ LGAD + + D K
Sbjct: 171 YGIGGFGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLV------VNPLKEDAAKF 223
Query: 203 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 262
G+ + +A N+ R GG L+GL EM + + + +IG
Sbjct: 224 MKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIG 283
Query: 263 -IFRYRSTWPLCIEFLRSGK----IDVKPL 287
I R ++F GK I+V+PL
Sbjct: 284 SIVGTRKDLQEALQFAAEGKVKTIIEVQPL 313
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 138/279 (49%), Gaps = 10/279 (3%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGIS-CGHCSLCKAGS 74
D + ++ K V+GHE GI++E+G++V SL+VGDRV++ CGHC C +G+
Sbjct: 42 DLHVAAGDYGNKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGN 101
Query: 75 YNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-ACRRAN 133
C E++ G +G +A + + A K+PD + E + V + A + +
Sbjct: 102 ETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSG 160
Query: 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 193
V P +I G+G +G + + A+ ++I D++ +L++A+ +GAD S D+
Sbjct: 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVIIN-SGDVN 219
Query: 194 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA 253
VD ++ KI G G+ + C A+ + +P GK+ + L TEMT+++
Sbjct: 220 PVD-EIKKITG--GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVALPNTEMTLSVPTV 276
Query: 254 AAREVDVIG-IFRYRSTWPLCIEFLRSGKIDVKPLITHR 291
V+V G + R +F GK VKP++ R
Sbjct: 277 VFDGVEVAGSLVGTRLDLAEAFQFGAEGK--VKPIVATR 313
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 133/314 (42%), Gaps = 42/314 (13%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR------ 82
P ++GHE AGI+E VG V ++ GD V C C CK+G NLC ++R
Sbjct: 63 PCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVG 122
Query: 83 -----------FFGSP-----PTNGSLAHKVVHPAKLCYKLP----DNVSLEEGAMCEPL 122
G P T+ + VVH + P D V L + P
Sbjct: 123 IMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGV--PT 180
Query: 123 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA 182
+G A V P +NV I G G +GL A+ GA RII D+D ++ A+ G
Sbjct: 181 GLGA-VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV 239
Query: 183 DETAKVSTDIEDVDTDVGK-IQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIG 240
+E + +D D + + I + G+D SF+C+G M AL G G ++G
Sbjct: 240 NEF----VNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 295
Query: 241 LAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFT 295
+A + ++ P + G F+ R+ P +E + +I V ITH T
Sbjct: 296 VAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHN--LT 353
Query: 296 QKEIEDAFEISAQG 309
EI AF++ +G
Sbjct: 354 LGEINKAFDLLHEG 367
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 140/315 (44%), Gaps = 43/315 (13%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 88
P+V+GHECAGI+E VG V + + GD+V C C LC + NLC ++R F P
Sbjct: 62 PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121
Query: 89 TNGSL-------------------------AHKVVHPAKLCYKLPDNVSLEEGAM--CEP 121
+ L + VV A L ++ D +LE + C
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL-ARVDDEANLERVCLIGCGF 180
Query: 122 LSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG 181
S A A V P + + G G +GL ++ + GA RII D++ ++ A+ LG
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240
Query: 182 ADETA---KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC- 237
A + ++ ++DV T++ G+D S DC G +T+ A++ T G C
Sbjct: 241 ATDCLNPRELDKPVQDVITEL------TAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCT 294
Query: 238 LIGLAKTEMTVALTPA-AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGF 294
++G EMT+ R ++ G ++ + P + ++ K D+ L+TH F
Sbjct: 295 VVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354
Query: 295 TQKEIEDAFEISAQG 309
+ I DA ++ +G
Sbjct: 355 --ESINDAIDLMKEG 367
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 140/315 (44%), Gaps = 43/315 (13%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 88
P+V+GHECAGI+E VG V + + GD+V C C LC + NLC ++R F P
Sbjct: 62 PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121
Query: 89 TNGSL-------------------------AHKVVHPAKLCYKLPDNVSLEEGAM--CEP 121
+ L + VV A L ++ D +LE + C
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL-ARVDDEANLERVCLIGCGF 180
Query: 122 LSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG 181
S A A V P + + G G +GL ++ + GA RII D++ ++ A+ LG
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240
Query: 182 ADETA---KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC- 237
A + ++ ++DV T++ G+D S DC G +T+ A++ T G C
Sbjct: 241 ATDCLNPRELDKPVQDVITEL------TAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCT 294
Query: 238 LIGLAKTEMTVALTPA-AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGF 294
++G EMT+ R ++ G ++ + P + ++ K D+ L+TH F
Sbjct: 295 VVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354
Query: 295 TQKEIEDAFEISAQG 309
+ I DA ++ +G
Sbjct: 355 --ESINDAIDLMKEG 367
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 10/267 (3%)
Query: 26 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 85
VK P+ +GHE AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G
Sbjct: 60 VKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLG 119
Query: 86 SPPTNGSLAHKVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 144
+G+ A V+ P K YKL ++E + A R+A++ P ++++G
Sbjct: 120 I-NYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIG 178
Query: 145 S-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 203
+ G +G + + A+A II DV + L A+ GAD S+ +D +++ +I
Sbjct: 179 AGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRIT 236
Query: 204 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG- 262
G G D D +KT+S GK ++GL ++ EV IG
Sbjct: 237 Q--GKGADAVIDLNNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGS 294
Query: 263 IFRYRSTWPLCIEFLRSGKIDVKPLIT 289
+ +S + + +GK VKP++T
Sbjct: 295 LVGNQSDFLGIMSLAEAGK--VKPMVT 319
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 137/322 (42%), Gaps = 39/322 (12%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR------ 82
P V+GHE AGI+E VG V ++ GD V C C CK+G NLC ++R
Sbjct: 81 PCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVG 140
Query: 83 -----------FFGSP-----PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE---PLS 123
G P T+ + VVH + K+ LE+ + P
Sbjct: 141 VMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA-KIDPVAPLEKVCLLGCGVPTG 199
Query: 124 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 183
+G A V P + V + G G +GL A+A GA RII D+D ++ A+N G
Sbjct: 200 LGA-VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVT 258
Query: 184 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLA 242
E + + + + + G+D SF+C+G M +AL G G ++G+A
Sbjct: 259 EFINPKEHEQPIQQVIVDLTDG---GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVA 315
Query: 243 KTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQK 297
+ ++ P + G F+ RS P ++ +I V ITH T
Sbjct: 316 ASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIKVDEYITHN--MTLA 373
Query: 298 EIEDAFEISAQGGNAIKVMFNL 319
+I AF++ G+ ++V+ ++
Sbjct: 374 DINKAFDL-MHDGDCLRVVLDM 394
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 14/265 (5%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 88
P V+G + +G+++ VG V+ GD V + PG+SCG C C AG NLCP + G
Sbjct: 58 PHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-H 116
Query: 89 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEP--LSVGVHACRRANVGPETNVMIMGSG 146
+G+ A VV P P N+S EE A L+ + V P +V++M +G
Sbjct: 117 RHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAG 176
Query: 147 P-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 205
+ + + A+ FGA R+I T +L A+ LGADET V+ D +V ++
Sbjct: 177 SGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADET--VNYTHPDWPKEVRRLTG- 232
Query: 206 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIG-I 263
G G D D G + AT GG++ + G + E T+ R++ ++G
Sbjct: 233 -GKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGST 290
Query: 264 FRYRSTWPLCIEFLRSGKIDVKPLI 288
+S + F+ GK+ KP++
Sbjct: 291 MASKSRLFPILRFVEEGKL--KPVV 313
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 131/312 (41%), Gaps = 22/312 (7%)
Query: 3 KAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI 62
K A + ++ M A + P+ +GHE G + E+G V VGD VA+
Sbjct: 31 KVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPW 90
Query: 63 SCGHCSLCKAGSYNLCPEMRFFG-SPP---TNGSLA-HKVVHPAKLCYKLPDNVSLEEGA 117
CG C C G N C G +PP + GS+A + +V A+ + D +
Sbjct: 91 GCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAP 150
Query: 118 MCEPLSVGVHACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS 175
+ + HA R +GP + +++G G +G V + RA A R+I D+D RL+
Sbjct: 151 LTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLA 210
Query: 176 IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK 235
+AR +GAD K D ++ G G FD VG T+ TA G
Sbjct: 211 LAREVGADAAVKSGAGAADAIREL-----TGGQGATAVFDFVGAQSTIDTAQQVVAVDGH 265
Query: 236 VCLIGL---AKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF 292
+ ++G+ A ++ + P A V + RS + R+G++D+ H
Sbjct: 266 ISVVGIHAGAHAKVGFFMIPFGASVVTP--YWGTRSELMEVVALARAGRLDI-----HTE 318
Query: 293 GFTQKEIEDAFE 304
FT E A+
Sbjct: 319 TFTLDEGPAAYR 330
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 45/317 (14%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 88
P+++GHE AGI+E +G V +++ GD+V C C C + NLC ++ SP
Sbjct: 65 PVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPA 124
Query: 89 TNGSL-------------------------AHKVVHPAKLCYKLPDNVSLEEGAMCE-PL 122
++ L + VV L K+ D+ +LE +
Sbjct: 125 SDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLA-KIDDDANLERVCLLGCGF 183
Query: 123 SVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG 181
S G A A V P + + G G +GL ++ +A GA RII D++ ++ A+ LG
Sbjct: 184 STGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALG 243
Query: 182 ADETAK---VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC- 237
A + + I++V ++ K G+D + DC G +TM AL+ T G C
Sbjct: 244 ATDCLNPRDLHKPIQEVIIELTK------GGVDFALDCAGGSETMKAALDCTTAGWGSCT 297
Query: 238 LIGLAKTEMTVALTPAA---AREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF 292
IG+A + + P R ++ G ++ + P + ++ K ++ L+TH
Sbjct: 298 FIGVAAGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTL 357
Query: 293 GFTQKEIEDAFEISAQG 309
F + I +AF++ QG
Sbjct: 358 PFDK--ISEAFDLMNQG 372
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 115/252 (45%), Gaps = 36/252 (14%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D +R + V P V+GHE +GIIE +G V L+VGD V L G CG C+ C G+
Sbjct: 47 DLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGY-CGKCTQCNTGNP 105
Query: 76 NLCPEM--RFFGSPPTNGSLA-----------HKVVHPAKLCY---------KLPDNVSL 113
C E R F + G+ A H + Y K+ +V +
Sbjct: 106 AYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPI 165
Query: 114 EEGAMCEPLSVGVH----ACRRA-NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD 168
E + PL G+ AC A V P ++ + G+G +GL LLAA+ GA II D
Sbjct: 166 E---LLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 222
Query: 169 VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 228
+ RL +A+ LGA T +++ +D V I+ G++ + + G + + ++
Sbjct: 223 IVESRLELAKQLGA--THVINSKTQD---PVAAIKEITDGGVNFALESTGSPEILKQGVD 277
Query: 229 ATRPGGKVCLIG 240
A GK+ ++G
Sbjct: 278 ALGILGKIAVVG 289
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 36/333 (10%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG C +CK
Sbjct: 49 DDQVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEG 108
Query: 76 NLCPEMRFFGSPPT----------NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL-- 122
N C + T G H + + Y + D +S+ + PL
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 123 --------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 173
S G A + A V + + G G +GL ++ +A GA RII D++ R
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDR 228
Query: 174 LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRP 232
+ A+ +GA E + +D + ++ M + G+D SF+ +G TM TAL+ +
Sbjct: 229 FAKAKEVGATE----CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 284
Query: 233 G-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 286
G ++G+ +++ P + + G F+ + + P + + K + P
Sbjct: 285 AYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDP 344
Query: 287 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ + G +I+ +
Sbjct: 345 LITHVLPF--EKINEGFDL-LRSGESIRTILTF 374
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 145/334 (43%), Gaps = 38/334 (11%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D+ + N + P+++GHE AGI+E VG V +++ GD+V CG C +CK
Sbjct: 49 DEHVVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPES 108
Query: 76 NLCPEMRFFGSP-----------PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL- 122
N C + G+P +G H V + Y + D ++ + PL
Sbjct: 109 NYCLKNDL-GNPRGTLQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLE 167
Query: 123 ---------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 172
S G A + A V P + + G G +GL ++ +A GA RII D++
Sbjct: 168 KVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKD 227
Query: 173 RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALNAT 230
+ + A+ LGA E + +D + ++ M G+D SF+ +G D M++ L
Sbjct: 228 KFAKAKELGATE----CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCH 283
Query: 231 RPGGKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVK 285
G ++G+ +++ P + + G F+ + + P + + K +
Sbjct: 284 EACGTSVIVGVPPDSQNLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLD 343
Query: 286 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LIT+ F ++I + F++ + G +I+ +
Sbjct: 344 ALITNVLPF--EKINEGFDL-LRSGKSIRTVLTF 374
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 144/334 (43%), Gaps = 39/334 (11%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG CS+CK
Sbjct: 49 DDHVVSGTLVAPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEG 108
Query: 76 NLCPEMRFFGSP-----------PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL- 122
NLC ++ P G H + + Y + D +S+ + PL
Sbjct: 109 NLC--LKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLE 166
Query: 123 ---------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 172
S G A + A V + + G G +GL ++ +A GA RII D++
Sbjct: 167 KVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKD 226
Query: 173 RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATR 231
+ + A+ +GA E + +D + ++ M + G+D SF+ +G TM AL+ +
Sbjct: 227 KFAKAKEVGATEC----VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQ 282
Query: 232 PG-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVK 285
G ++G+ +++ P + + G F+ + + P + + K +
Sbjct: 283 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALD 342
Query: 286 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
PLITH F ++I + F++ + G +I+ +
Sbjct: 343 PLITHVLPF--EKINEGFDL-LRSGKSIRTILTF 373
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 144/334 (43%), Gaps = 39/334 (11%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG CS+CK
Sbjct: 49 DDHVVSGTLVAPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEG 108
Query: 76 NLCPEMRFFGSP-----------PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL- 122
NLC ++ P G H + + Y + D +S+ + PL
Sbjct: 109 NLC--LKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLE 166
Query: 123 ---------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 172
S G A + A V + + G G +GL ++ +A GA RII D++
Sbjct: 167 KVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKD 226
Query: 173 RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATR 231
+ + A+ +GA E + +D + ++ M + G+D SF+ +G TM AL+ +
Sbjct: 227 KFAKAKEVGATEC----VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQ 282
Query: 232 PG-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVK 285
G ++G+ +++ P + + G F+ + + P + + K +
Sbjct: 283 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALD 342
Query: 286 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
PLITH F ++I + F++ + G +I+ +
Sbjct: 343 PLITHVLPF--EKINEGFDL-LRSGKSIRTILTF 373
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 142/333 (42%), Gaps = 36/333 (10%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG C +CK
Sbjct: 49 DDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEG 108
Query: 76 NLCPEMRFFGSPPT----------NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL-- 122
N C + T G H + + Y + D +S+ + PL
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 123 --------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 173
S G A + A V + + G G +GL ++ +A GA RII D++ +
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 174 LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRP 232
+ A+ +GA E + +D + ++ M + G+D SF+ +G TM TAL+ +
Sbjct: 229 FAKAKEVGATE----CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 284
Query: 233 G-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 286
G ++G+ +++ P + + G F+ + + P + + K + P
Sbjct: 285 AYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDP 344
Query: 287 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ + G +I+ +
Sbjct: 345 LITHVLPF--EKINEGFDL-LRSGESIRTILTF 374
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 139/331 (41%), Gaps = 37/331 (11%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + N + P+++GHE AGI+E VG V +++ GD+V CG C +CK
Sbjct: 49 DDHVVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPES 108
Query: 76 NLCPEMRFFGSP-----------PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL- 122
N C + G+P G H + + Y + D ++ + PL
Sbjct: 109 NYCLKNDL-GNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLE 167
Query: 123 ---------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 172
S G A A V P + + G G +GL ++ +A GA RII D++
Sbjct: 168 KVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKD 227
Query: 173 RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALNAT 230
+ + A+ LGA E + +D + ++ M G+D SF+ +G D M++ L
Sbjct: 228 KFAKAKELGATE----CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCH 283
Query: 231 RPGGKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVK 285
G ++G+ +++ P + V G F+ + P + + K +
Sbjct: 284 EACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLD 343
Query: 286 PLITHRFGFTQKEIEDAFEISAQGGNAIKVM 316
LITH F ++I + F++ G + V+
Sbjct: 344 ALITHVLPF--EKINEGFDLLHSGKSICTVL 372
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 140/334 (41%), Gaps = 38/334 (11%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + N + P+++GHE AGI+E VG V +++ GD+V CG C +CK
Sbjct: 49 DDHVVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPES 108
Query: 76 NLCPEMRFFGSP-----------PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL- 122
N C + G+P G H + + Y + D ++ + PL
Sbjct: 109 NYCLKNDL-GNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLE 167
Query: 123 ---------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 172
S G A A V P + + G G +GL ++ +A GA RII D++
Sbjct: 168 KVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKD 227
Query: 173 RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALNAT 230
+ + A+ LGA E + +D + ++ M G+D SF+ +G D M++ L
Sbjct: 228 KFAKAKELGATE----CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCH 283
Query: 231 RPGGKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVK 285
G ++G+ +++ P + V G F+ + P + + K +
Sbjct: 284 EACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLD 343
Query: 286 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ G +I+ +
Sbjct: 344 ALITHVLPF--EKINEGFDL-LHSGKSIRTVLTF 374
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 140/334 (41%), Gaps = 38/334 (11%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + N + P+++GHE AGI+E VG V +++ GD+V CG C +CK
Sbjct: 49 DDHVVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPES 108
Query: 76 NLCPEMRFFGSP-----------PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL- 122
N C + G+P G H + + Y + D ++ + PL
Sbjct: 109 NYCLKNDL-GNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLE 167
Query: 123 ---------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 172
S G A A V P + + G G +GL ++ +A GA RII D++
Sbjct: 168 KVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKD 227
Query: 173 RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALNAT 230
+ + A+ LGA E + +D + ++ M G+D SF+ +G D M++ L
Sbjct: 228 KFAKAKELGATE----CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCH 283
Query: 231 RPGGKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVK 285
G ++G+ +++ P + V G F+ + P + + K +
Sbjct: 284 EACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLD 343
Query: 286 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ G +I+ +
Sbjct: 344 ALITHVLPF--EKINEGFDL-LHSGKSIRTVLTF 374
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 140/334 (41%), Gaps = 38/334 (11%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + N + P+++GHE AGI+E VG V +++ GD+V CG C +CK
Sbjct: 49 DDHVVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPES 108
Query: 76 NLCPEMRFFGSP-----------PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL- 122
N C + G+P G H + + Y + D ++ + PL
Sbjct: 109 NYCLKNDL-GNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLE 167
Query: 123 ---------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 172
S G A A V P + + G G +GL ++ +A GA RII D++
Sbjct: 168 KVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKD 227
Query: 173 RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALNAT 230
+ + A+ LGA E + +D + ++ M G+D SF+ +G D M++ L
Sbjct: 228 KFAKAKELGATE----CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCH 283
Query: 231 RPGGKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVK 285
G ++G+ +++ P + V G F+ + P + + K +
Sbjct: 284 EACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLD 343
Query: 286 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ G +I+ +
Sbjct: 344 ALITHVLPF--EKINEGFDL-LHSGKSIRTVLTF 374
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 142/333 (42%), Gaps = 36/333 (10%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG C +CK
Sbjct: 49 DDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEG 108
Query: 76 NLCPEMRFFGSPPT----------NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL-- 122
N C + T G H + + Y + D +S+ + PL
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 123 --------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 173
S G A + A V + + G G +GL ++ +A GA RII D++ +
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 174 LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRP 232
+ A+ +GA E + +D + ++ M + G+D SF+ +G TM TAL+ +
Sbjct: 229 FAKAKEVGATE----CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 284
Query: 233 G-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 286
G ++G+ +++ P + + G F+ + + P + + K + P
Sbjct: 285 AYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDP 344
Query: 287 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ + G +I+ +
Sbjct: 345 LITHVLPF--EKINEGFDL-LRSGESIRTILTF 374
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 142/333 (42%), Gaps = 36/333 (10%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG C +CK
Sbjct: 49 DDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEG 108
Query: 76 NLCPEMRFFGSPPT----------NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL-- 122
N C + T G H + + Y + D +S+ + PL
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 123 --------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 173
S G A + A V + + G G +GL ++ +A GA RII D++ +
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 174 LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRP 232
+ A+ +GA E + +D + ++ M + G+D SF+ +G TM TAL+ +
Sbjct: 229 FAKAKEVGATE----CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 284
Query: 233 G-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 286
G ++G+ +++ P + + G F+ + + P + + K + P
Sbjct: 285 AYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDP 344
Query: 287 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ + G +I+ +
Sbjct: 345 LITHVLPF--EKINEGFDL-LRSGESIRTILTF 374
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 143/333 (42%), Gaps = 36/333 (10%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG C +CK
Sbjct: 49 DDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEG 108
Query: 76 NLCPEMRFFGSPPT----------NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL-- 122
N C + T G H + + Y + D +S+ + PL
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 123 --------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 173
S G A + A V + + G G +GL ++ +A GA RII D++ +
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 174 LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRP 232
+ A+ +GA E + +D + ++ M + G+D SF+ +G TM TAL+ +
Sbjct: 229 FAKAKEVGATE----CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 284
Query: 233 G-GKVCLIGLAKTEMTVALTPA---AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKP 286
G ++G+ +++ P + R + G F+ + + P + + K + P
Sbjct: 285 AYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDP 344
Query: 287 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ + G +I+ +
Sbjct: 345 LITHVLPF--EKINEGFDL-LRSGESIRTILTF 374
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 36/333 (10%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG C +CK
Sbjct: 49 DDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEG 108
Query: 76 NLCPEMRFFGSPPT----------NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL-- 122
N C + T G H + + Y + D +S+ + PL
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 123 --------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 173
S G A + A V + + G G +GL ++ +A GA RII D++ +
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 174 LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRP 232
+ A+ +GA E + +D + ++ M + G+D SF+ +G TM TAL+ +
Sbjct: 229 FAKAKEVGATE----CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 284
Query: 233 GGKVCLI-GLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 286
V +I G+ +++ P + + G F+ + + P + + K + P
Sbjct: 285 AYGVSVISGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDP 344
Query: 287 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ + G +I+ +
Sbjct: 345 LITHVLPF--EKINEGFDL-LRSGESIRTILTF 374
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 36/333 (10%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG C +CK
Sbjct: 49 DDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEG 108
Query: 76 NLCPEMRFFGSPPT----------NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL-- 122
N C + T G H + + Y + D +S+ + PL
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 123 --------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 173
S G A + A V + + G G +GL ++ +A GA RII D++ +
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 174 LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRP 232
+ A+ +GA E + +D + ++ M + G+D SF+ +G TM TAL+ +
Sbjct: 229 FAKAKEVGATE----CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 284
Query: 233 GGKVCLI-GLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 286
V +I G+ +++ P + + G F+ + + P + + K + P
Sbjct: 285 AYGVSVITGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDP 344
Query: 287 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ + G +I+ +
Sbjct: 345 LITHVLPF--EKINEGFDL-LRSGESIRTILTF 374
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 12/268 (4%)
Query: 26 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 85
VK P+ +GHE AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G
Sbjct: 60 VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG 119
Query: 86 SPPTNGSLAHKVVHP-AKLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGP-ETNVMI 142
+G+ A V+ P K YKL ++E + C ++ A R+A++ P +T +++
Sbjct: 120 I-NFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITT-YRAVRKASLDPTKTLLVV 177
Query: 143 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 202
G +G + + A+A II DV + + A+ GAD ++ ++D ++ +I
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRI 235
Query: 203 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 262
+ G+D D +KT+S A GK ++GL ++ E+ +G
Sbjct: 236 TES--KGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVG 293
Query: 263 -IFRYRSTWPLCIEFLRSGKIDVKPLIT 289
+ +S + + +GK VKP+IT
Sbjct: 294 SLVGNQSDFLGIMRLAEAGK--VKPMIT 319
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 29 PMVIGHECAGIIEEVGSEV------KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR 82
P+ +GHE +G++ E G E K E+G+ V E + CGHC C G N C +
Sbjct: 92 PVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLN 151
Query: 83 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG-------AMCEPLSVGVHAC--RRAN 133
G +G+ A V AK + L + + EG ++ EP SV +A R
Sbjct: 152 ELGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGG 210
Query: 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 183
+ P NV+I+G GPIGL + + GA ++I+++ R ++A+ LGAD
Sbjct: 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGAD 260
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 141/333 (42%), Gaps = 36/333 (10%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG C +CK
Sbjct: 49 DDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEG 108
Query: 76 NLCPEMRFFGSPPT----------NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL-- 122
N C + T G H + + Y + D +S+ + PL
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 123 --------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 173
S G A + A V + + G G GL ++ +A GA RII D++ +
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 174 LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRP 232
+ A+ +GA E + +D + ++ M + G+D SF+ +G TM TAL+ +
Sbjct: 229 FAKAKEVGATE----CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 284
Query: 233 G-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 286
G ++G+ +++ P + + G F+ + + P + + K + P
Sbjct: 285 AYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDP 344
Query: 287 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ + G +I+ +
Sbjct: 345 LITHVLPF--EKINEGFDL-LRSGESIRTILTF 374
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 141/333 (42%), Gaps = 36/333 (10%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG C +CK
Sbjct: 49 DDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEG 108
Query: 76 NLCPEMRFFGSPPT----------NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL-- 122
N C + T G H + + Y + D +S+ + PL
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 123 --------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 173
S G A + A V + + G G GL ++ +A GA RII D++ +
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 174 LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRP 232
+ A+ +GA E + +D + ++ M + G+D SF+ +G TM TAL+ +
Sbjct: 229 FAKAKEVGATE----CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 284
Query: 233 G-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 286
G ++G+ +++ P + + G F+ + + P + + K + P
Sbjct: 285 AYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDP 344
Query: 287 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ + G +I+ +
Sbjct: 345 LITHVLPF--EKINEGFDL-LRSGESIRTILTF 374
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 136/315 (43%), Gaps = 36/315 (11%)
Query: 29 PMVIGHECAGIIEEVGSEVKSL-----EVGDRVALEPGISCGHCSLCKAGSY-NLCPEMR 82
P+++GHE AG + EV E + L + GD + GI+CG C CK LCP +
Sbjct: 72 PIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRK 131
Query: 83 FFG-------SPPTNGSLA-HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANV 134
+G P G + H V+ P K+ + L+ AM + G A +
Sbjct: 132 VYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDE 189
Query: 135 GPET----NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA-KVS 189
PE+ V+I G+GP+GL ++ AR+ GA +I+ RL +A +GAD T +
Sbjct: 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE 249
Query: 190 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVA 249
T +E+ + I + G G D + G + + R GG + G+A + V
Sbjct: 250 TSVEERRKAIMDITH--GRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPV- 306
Query: 250 LTPAAAREVDVIGIFRYRSTW-PLCIEFLRSGKID------VKPLITHRFGFTQKEIEDA 302
P E V+ ++ W F+++ I + LITHR KE A
Sbjct: 307 --PFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPL--KEANKA 362
Query: 303 FEISAQGGNAIKVMF 317
E+ + A+KV+
Sbjct: 363 LEL-MESREALKVIL 376
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 12/268 (4%)
Query: 26 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 85
VK P+ +GHE AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G
Sbjct: 60 VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG 119
Query: 86 SPPTNGSLAHKVVHP-AKLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGP-ETNVMI 142
+G+ A V+ P K YKL ++E + C ++ A R+A++ P +T +++
Sbjct: 120 I-NFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITT-YRAVRKASLDPTKTLLVV 177
Query: 143 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 202
G +G + + A+A II DV + + A+ GAD ++ ++D ++ +I
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRI 235
Query: 203 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 262
+ G+D D +KT+S A GK ++GL ++ E+ +G
Sbjct: 236 TES--KGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVG 293
Query: 263 -IFRYRSTWPLCIEFLRSGKIDVKPLIT 289
+ +S + + +GK VKP+IT
Sbjct: 294 SLVGNQSDFLGIMRLAEAGK--VKPMIT 319
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 141/333 (42%), Gaps = 36/333 (10%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P++ GHE AGI+E +G V ++ GD+V CG C +CK
Sbjct: 49 DDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEG 108
Query: 76 NLCPEMRFFGSPPT----------NGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL-- 122
N C + T G H + + Y + D +S+ + PL
Sbjct: 109 NFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEK 168
Query: 123 --------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR 173
S G A + A V + + G G +GL ++ +A GA RII D++ +
Sbjct: 169 VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 228
Query: 174 LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRP 232
+ A+ +GA E + +D + ++ M + G+D SF+ +G TM TAL+ +
Sbjct: 229 FAKAKEVGATE----CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 284
Query: 233 G-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 286
G ++ + +++ P + + G F+ + + P + + K + P
Sbjct: 285 AYGVSVIVAVTPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDP 344
Query: 287 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319
LITH F ++I + F++ + G +I+ +
Sbjct: 345 LITHVLPF--EKINEGFDL-LRSGESIRTILTF 374
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 12/268 (4%)
Query: 26 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 85
VK P+ +GHE AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G
Sbjct: 60 VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLG 119
Query: 86 SPPTNGSLAHKVVHP-AKLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGP-ETNVMI 142
+G+ A V+ P K YKL ++E + C ++ A R+A++ P +T +++
Sbjct: 120 I-NFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITT-YRAVRKASLDPTKTLLVV 177
Query: 143 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 202
G +G + + A+A II DV + + A+ GAD ++ ++D ++ +I
Sbjct: 178 GAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRI 235
Query: 203 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 262
+ G+D D +KT+S A GK ++GL ++ E+ +G
Sbjct: 236 TES--KGVDAVIDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVG 293
Query: 263 -IFRYRSTWPLCIEFLRSGKIDVKPLIT 289
+ +S + + +GK VKP+IT
Sbjct: 294 SLVGNQSDFLGIMRLAEAGK--VKPMIT 319
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGS 86
P + GHE G + VGS VK ++ GDRV + P + +CGHC C G LC E G
Sbjct: 81 PFIPGHEGVGFVSAVGSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEEQLNTGY 139
Query: 87 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG 144
NG A VV LP N+ E A +C ++V + + P V+I G
Sbjct: 140 -SVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISG 197
Query: 145 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 204
G +G + + ARA G + D+D ++L +AR LGA T T + D + K +
Sbjct: 198 IGGLGHMAVQYARAMGL-NVAAVDIDDRKLDLARRLGATVTVNAKT-VADPAAYIRKETD 255
Query: 205 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-I 263
G+ V+ K AL GG V L GL + +++ V V G I
Sbjct: 256 GGAQGVLVTAVS---PKAFEQALGMVARGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSI 312
Query: 264 FRYRSTWPLCIEFLRSGKI 282
R ++F GK+
Sbjct: 313 VGTRLDLQESLDFAADGKV 331
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 105/239 (43%), Gaps = 14/239 (5%)
Query: 9 CMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCS 68
C ++ Q M K P +GHE G IEEV V+ LE GD V L P ++ G C
Sbjct: 54 CHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCL 113
Query: 69 LCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS-VGVH 127
C+AG C + F G +G A + + KLP ++S E+ PL+ G+
Sbjct: 114 ACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGIT 172
Query: 128 ACRRAN-----VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA 182
A R + P V I+G G +G + + + +I DV ++L +A LGA
Sbjct: 173 AYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGA 232
Query: 183 DETAKVSTD-IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240
D D ++ V ++ G G++V+ D VG T+ G++ ++G
Sbjct: 233 DHVVDARRDPVKQV------MELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVG 285
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 42/334 (12%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
D + + P+++GHE AGI+E VG V +++ GD+V CG C +CK
Sbjct: 49 DDHVVSGTMVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPES 108
Query: 76 NLCPEMRFFGSPPTNGSLA---------HKVVHPAKLCYKLPDNVSLEEGAMCE-----P 121
N C ++ S P G+L K +H ++E A+ + P
Sbjct: 109 NYC--LKNDVSNP-QGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASP 165
Query: 122 L----------SVGV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170
L S G A A V P + + G G +GL ++ +A GA RII D++
Sbjct: 166 LEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDIN 225
Query: 171 VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALN 228
+ + A+ LGA E + +D + ++ M G+D SF+ +G D M++ L
Sbjct: 226 KDKFAKAKELGATE----CINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLC 281
Query: 229 ATRPGGKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKID 283
G ++G+ +++ P + ++G F+ + P + + K
Sbjct: 282 CHEACGTSVIVGVPPDSQNLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFS 341
Query: 284 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 317
+ LITH F ++I + F++ G +I+ +
Sbjct: 342 LDALITHVLPF--EKINEGFDL-LHSGKSIRTIL 372
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 118/266 (44%), Gaps = 17/266 (6%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGS 86
P + GHE G + VGS V ++ GDRV + P + +CG+C C G LC + + G
Sbjct: 58 PFIPGHEGVGYVSAVGSGVSRVKEGDRVGV-PWLYSACGYCEHCLQGWETLCEKQQNTGY 116
Query: 87 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG 144
NG VV LPD V E A +C ++V + + P V+I G
Sbjct: 117 -SVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISG 174
Query: 145 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 204
G +G V + ARA G R+ D+D +L++AR LGA+ V+ + D D +Q
Sbjct: 175 IGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARDTDP-AAWLQK 228
Query: 205 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-I 263
+G V V K S A+ R GG + L GL + + + + + G I
Sbjct: 229 EIGGAHGVLVTAVS-PKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSI 287
Query: 264 FRYRSTWPLCIEFLRSGKIDVKPLIT 289
RS ++F G DVK ++
Sbjct: 288 VGTRSDLQESLDFAAHG--DVKATVS 311
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 125/314 (39%), Gaps = 43/314 (13%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---G 85
P+++GHE AGI+E VG V L+ GD V CG C C NLC ++R G
Sbjct: 61 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 86 SPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SVGVH 127
P S + H + Y + ++S+ + PL S G
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 180
Query: 128 AC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA 186
A A + P + + G G +GL ++ + GA RII D++ + + A+ GA E
Sbjct: 181 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE-- 238
Query: 187 KVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE 245
+ +D + ++ M G+D SF+C+G K M AL A G
Sbjct: 239 --CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVG 292
Query: 246 MTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPLITHRFGFT 295
+ + A R ++ ++ T W P + S KI V +TH F
Sbjct: 293 VAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF- 351
Query: 296 QKEIEDAFEISAQG 309
EI AFE+ G
Sbjct: 352 -DEINKAFELMHSG 364
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 12/268 (4%)
Query: 26 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 85
VK P+ +GHE AG IEEVG EV GD VA+ P G+C C+ G +LC R+ G
Sbjct: 60 VKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG 119
Query: 86 SPPTNGSLAHKVVHP-AKLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGP-ETNVMI 142
+G+ A V+ P K YKL ++E + C ++ A R+A++ P +T +++
Sbjct: 120 I-NFDGAYAEYVIVPHYKYXYKLRRLNAVEAAPLTCSGITT-YRAVRKASLDPTKTLLVV 177
Query: 143 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 202
G +G + A+A II DV + + A+ GAD ++ ++D ++ +I
Sbjct: 178 GAGGGLGTXAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRI 235
Query: 203 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 262
+ G+D D +KT+S A GK +GL ++ E+ +G
Sbjct: 236 TES--KGVDAVIDLNNSEKTLSVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVG 293
Query: 263 IFRYRSTWPLCIEFL-RSGKIDVKPLIT 289
+ L I L +GK VKP IT
Sbjct: 294 SLVGNQSDFLGIXRLAEAGK--VKPXIT 319
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 125/314 (39%), Gaps = 43/314 (13%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---G 85
P+++GHE AGI+E VG V L+ GD V CG C C NLC ++R G
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 86 SPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SVGVH 127
P S + H + Y + ++S+ + PL S G
Sbjct: 122 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 181
Query: 128 AC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA 186
A A + P + + G G +GL ++ + GA RII D++ + + A+ GA E
Sbjct: 182 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE-- 239
Query: 187 KVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE 245
+ +D + ++ M G+D SF+C+G K M AL A G
Sbjct: 240 --CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVG 293
Query: 246 MTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPLITHRFGFT 295
+ + A R ++ ++ T W P + S KI V +TH F
Sbjct: 294 VAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF- 352
Query: 296 QKEIEDAFEISAQG 309
EI AFE+ G
Sbjct: 353 -DEINKAFELMHSG 365
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 125/314 (39%), Gaps = 43/314 (13%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---G 85
P+++GHE AGI+E VG V L+ GD V CG C C NLC ++R G
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 86 SPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SVGVH 127
P S + H + Y + ++S+ + PL S G
Sbjct: 122 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 181
Query: 128 AC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA 186
A A + P + + G G +GL ++ + GA RII D++ + + A+ GA E
Sbjct: 182 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE-- 239
Query: 187 KVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE 245
+ +D + ++ M G+D SF+C+G K M AL A G
Sbjct: 240 --CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVG 293
Query: 246 MTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPLITHRFGFT 295
+ + A R ++ ++ T W P + S KI V +TH F
Sbjct: 294 VAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF- 352
Query: 296 QKEIEDAFEISAQG 309
EI AFE+ G
Sbjct: 353 -DEINKAFELMHSG 365
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 97/219 (44%), Gaps = 18/219 (8%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGS 86
P + GHE G + VGS V ++ GDRV + P + +CG C C G LC + G
Sbjct: 62 PFIPGHEGVGYVAAVGSGVTRVKEGDRVGI-PWLYTACGCCEHCLTGWETLCESQQNTGY 120
Query: 87 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG 144
NG A V+ LP NV E A +C ++V ++ N P V I G
Sbjct: 121 -SVNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISG 178
Query: 145 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVSTDIEDVDTDVGKI 202
G +G V + ARA G + D+D +L +AR LGA T A+ +E + D+G
Sbjct: 179 IGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGA 237
Query: 203 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 241
+ + + + A+ R GG + L+GL
Sbjct: 238 HGVLVTAVS--------NSAFGQAIGMARRGGTIALVGL 268
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 124/314 (39%), Gaps = 43/314 (13%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---G 85
P+++GH AGI+E VG V L+ GD V CG C C NLC ++R G
Sbjct: 61 PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 86 SPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SVGVH 127
P S + H + Y + ++S+ + PL S G
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 180
Query: 128 AC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA 186
A A + P + + G G +GL ++ + GA RII D++ + + A+ GA E
Sbjct: 181 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE-- 238
Query: 187 KVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE 245
+ +D + ++ M G+D SF+C+G K M AL A G
Sbjct: 239 --CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVG 292
Query: 246 MTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPLITHRFGFT 295
+ + A R ++ ++ T W P + S KI V +TH F
Sbjct: 293 VAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF- 351
Query: 296 QKEIEDAFEISAQG 309
EI AFE+ G
Sbjct: 352 -DEINKAFELMHSG 364
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 122/311 (39%), Gaps = 38/311 (12%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE-------- 80
P+V+GHE AGI+E VG V + G++V CG C C++ N C +
Sbjct: 63 PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122
Query: 81 ----------------MRFFGSPPTNGSLAHKVVHPAKLCYKLP-DNVSLEEGAMCEPLS 123
++F G+ + + AK+ P D V L +
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFG 182
Query: 124 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 183
V+ A V P + + G G +GL ++ + GA RII D++ + A+ GA
Sbjct: 183 AAVNT---AKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT 239
Query: 184 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLA 242
+ + E + + K+ N G+D S +CVG M AL + G G L+G
Sbjct: 240 DFVNPNDHSEPISQVLSKMTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWT 296
Query: 243 KTE----MTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKE 298
+ L + + G F+ + P ++ K+ + ITHR +
Sbjct: 297 DLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ES 354
Query: 299 IEDAFEISAQG 309
+ DA ++ G
Sbjct: 355 VNDAIDLMKHG 365
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 130/319 (40%), Gaps = 35/319 (10%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 86
K P+++GHE G++E +G+ V ++ GD+V CG C CK+ + N C +
Sbjct: 61 KFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK 120
Query: 87 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG-------VHAC---------- 129
+ + K Y L + E + ++V + +C
Sbjct: 121 TGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGY 180
Query: 130 ----RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 185
A V P + + G G +G ++ +A GA RII + A LGA E
Sbjct: 181 GAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE- 239
Query: 186 AKVSTDIEDVDTDVGK-IQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAK 243
+ +D D + + I G+D + +C G +TM AL +T G G ++GLA
Sbjct: 240 ---CLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLAS 296
Query: 244 -----TEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKE 298
+ L + + V G F+ L ++++ KI+V L++ + T +
Sbjct: 297 PNERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKK-KINVNFLVSTK--LTLDQ 353
Query: 299 IEDAFEISAQGGNAIKVMF 317
I AFE+ + G +M
Sbjct: 354 INKAFELLSSGQGVRSIMI 372
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 39/259 (15%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
DQ + FIV K V+GHE G + E GS+V+ +++GD V++ ++CG C CK
Sbjct: 48 DQHIYRGRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARS 107
Query: 76 NLC------PEMRF----FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEG-----AM 118
++C P+ F +G A V+ P + K D E +
Sbjct: 108 DVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLI 167
Query: 119 CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 178
+ L G H C A V P ++V I G+GP+G AR GA +I+ D + +RL +
Sbjct: 168 SDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227
Query: 179 NLGADE-TAKVSTDIED-VDTDVGKIQNAMGSGIDVSFDCVGFD----------KTMSTA 226
+ G + + S + D +D +GK + +D D VGF+ +T + A
Sbjct: 228 DAGFETIDLRNSAPLRDQIDQILGKPE------VDCGVDAVGFEAHGLGDEANTETPNGA 281
Query: 227 LNA----TRPGGKVCLIGL 241
LN+ R GG + + G+
Sbjct: 282 LNSLFDVVRAGGAIGIPGI 300
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 41/273 (15%)
Query: 16 DQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75
DQ M + +V+GHE G + E G +V++L++GD V++ ++CG C CK
Sbjct: 49 DQHMVRGRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHT 108
Query: 76 NLCPEM---RFFGS-------PPTNGSLAHKVVHPAKL-CYKLPDNVSLEEGA-----MC 119
+C + R G+ T G + +V A KLPD E +
Sbjct: 109 GVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLS 168
Query: 120 EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN 179
+ L G H A VGP + V + G+GP+GL +AR GA +I+ D++ RL+ A+
Sbjct: 169 DILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228
Query: 180 LGADETAKVSTDI---EDVDTDVGKIQNAMGSGIDVSFDCVGFD-----------KTMST 225
G E A +S D E + +G+ + +D + D VGF+ + +T
Sbjct: 229 QGF-EIADLSLDTPLHEQIAALLGEPE------VDCAVDAVGFEARGHGHEGAKHEAPAT 281
Query: 226 ALNA----TRPGGKVCLIGLAKTEMTVALTPAA 254
LN+ TR GK+ + GL TE A+ AA
Sbjct: 282 VLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAA 314
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 37/327 (11%)
Query: 22 ANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM 81
+ K P+++GHE GI+E +G V +++ GD+V C C+ C+ NLC
Sbjct: 55 GTMVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRS 114
Query: 82 RFFGSP---------PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEP---------- 121
G G H ++ + Y + D S+ + P
Sbjct: 115 DITGRGVLADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCG 174
Query: 122 LSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL 180
S G A + V P + ++ G G +GL ++ ++ GA RII D++ + A +
Sbjct: 175 FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 234
Query: 181 GADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPG-GKVCL 238
GA E +D + ++ + M G+ + +F+ +G +TM AL + G +
Sbjct: 235 GATE----CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVV 290
Query: 239 IGLAKTEMTVALTPA---AAREVD--VIGIFRYRSTWP-LCIEFLRSGKIDVKPLITHRF 292
+G+ + + P R V G + R P L EFL + K D+ LITH
Sbjct: 291 VGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFL-AKKFDLDQLITHVL 349
Query: 293 GFTQKEIEDAFEISAQGGNAIKVMFNL 319
F K+I + FE+ G +I+ +
Sbjct: 350 PF--KKISEGFEL-LNSGQSIRTVLTF 373
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 37/327 (11%)
Query: 22 ANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM 81
+ K P+++GHE GI+E +G V +++ GD+V C C+ C+ NLC
Sbjct: 55 GTMVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRS 114
Query: 82 RFFGSP---------PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEP---------- 121
G G H ++ + Y + D S+ + P
Sbjct: 115 DITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCG 174
Query: 122 LSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL 180
S G A + V P + ++ G G +GL ++ ++ GA RII D++ + A +
Sbjct: 175 FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 234
Query: 181 GADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPG-GKVCL 238
GA E +D + ++ + M G+ + +F+ +G +TM AL + G +
Sbjct: 235 GATE----CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVV 290
Query: 239 IGLAKTEMTVALTPA---AAREVD--VIGIFRYRSTWP-LCIEFLRSGKIDVKPLITHRF 292
+G+ + + P R V G + R P L EFL + K D+ LITH
Sbjct: 291 VGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFL-AKKFDLDQLITHVL 349
Query: 293 GFTQKEIEDAFEISAQGGNAIKVMFNL 319
F K+I + FE+ G +I+ +
Sbjct: 350 PF--KKISEGFEL-LNSGQSIRTVLTF 373
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 123/314 (39%), Gaps = 74/314 (23%)
Query: 30 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM-------- 81
M++GHE G + EVGSEVK + GDRV + S + G + M
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 82 -------RFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRAN 133
FF + +LAH LP + LE M + ++ G H A+
Sbjct: 115 VKDGVFGEFFHVNDADMNLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELAD 163
Query: 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 193
+ V ++G GP+GL+ + A+ GA RII + A+ GA TDI
Sbjct: 164 IELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI- 215
Query: 194 DVDTDVGKIQNAM-----GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI--------- 239
V+ G I++ + G G+D + G M+TA+ +PGG + +
Sbjct: 216 -VNYKDGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVL 274
Query: 240 ---------GLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITH 290
G+A + L P R R + + F + ++D L+TH
Sbjct: 275 DVPRLEWGCGMAHKTIKGGLCPGG----------RLRMERLIDLVFYK--RVDPSKLVTH 322
Query: 291 RF-GFTQKEIEDAF 303
F GF IE AF
Sbjct: 323 VFRGFDN--IEKAF 334
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 123/314 (39%), Gaps = 74/314 (23%)
Query: 30 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM-------- 81
M++GHE G + EVGSEVK + GDRV + S + G + M
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 82 -------RFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRAN 133
FF + +LAH LP + LE M + ++ G H A+
Sbjct: 115 VKDGVFGEFFHVNDADMNLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELAD 163
Query: 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 193
+ V ++G GP+GL+ + A+ GA RII + A+ GA TDI
Sbjct: 164 IELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI- 215
Query: 194 DVDTDVGKIQNAM-----GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI--------- 239
V+ G I++ + G G+D + G M+TA+ +PGG + +
Sbjct: 216 -VNYKDGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVL 274
Query: 240 ---------GLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITH 290
G+A + L P R R + + F + ++D L+TH
Sbjct: 275 PVPRLEWGCGMAHKTIKGGLCPGG----------RLRMERLIDLVFYK--RVDPSKLVTH 322
Query: 291 RF-GFTQKEIEDAF 303
F GF IE AF
Sbjct: 323 VFRGFDN--IEKAF 334
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 25/224 (11%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 86
+K M++GHE G + EVGSEVK + GDRV + P + SL + G
Sbjct: 52 RKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGW 110
Query: 87 PPTN------GSLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPET 138
+N G H V+ A + LP ++ LE M + ++ G H A++
Sbjct: 111 KFSNFKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGA 168
Query: 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 198
V ++G GP+GL+ + A+ GA RII + A+ GA TDI V+
Sbjct: 169 TVAVLGIGPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI--VNYK 219
Query: 199 VGKIQNAM-----GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237
G I++ + G G+D + G M+TA+ +PGG +
Sbjct: 220 DGPIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIA 263
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 121/302 (40%), Gaps = 44/302 (14%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 86
+ M++GHE G I +VGS VK L+VGD+V + P I+ Y + G
Sbjct: 52 RHDMILGHEAVGQIVKVGSLVKRLKVGDKVIV-PAITPDWGEEESQRGYPMHSGGMLGGW 110
Query: 87 PPTN--GSLAHKVVH----PAKLCYKLPDNVSLEEGAMCEPL-SVGVHACRRANVGPETN 139
+N + +V H A L LP ++ E+ M + + G H AN+
Sbjct: 111 KFSNFKDGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDT 169
Query: 140 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 199
V ++G GP+GL+++ A GA RI IA GA T ++ D+ +
Sbjct: 170 VCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNGDIVEQI 227
Query: 200 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV------------------CLIGL 241
K + G G+D G T + A+ +PG + +G+
Sbjct: 228 LKATD--GKGVDKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGM 285
Query: 242 AKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIED 301
+ LTP ++ + + +GK+D LITHRF +K +ED
Sbjct: 286 GHKHIHGGLTPGGRVRMEKLA------------SLISTGKLDTSKLITHRFEGLEK-VED 332
Query: 302 AF 303
A
Sbjct: 333 AL 334
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 121/302 (40%), Gaps = 44/302 (14%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 86
+ M++GHE G I +VGS VK L+VGD+V + P I+ Y + G
Sbjct: 52 RHDMILGHEAVGQIVKVGSLVKRLKVGDKVIV-PAITPDWGEEESQRGYPMHSGGMLGGW 110
Query: 87 PPTN--GSLAHKVVH----PAKLCYKLPDNVSLEEGAMCEPL-SVGVHACRRANVGPETN 139
+N + +V H A L LP ++ E+ M + + G H AN+
Sbjct: 111 KFSNFKDGVFSEVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDT 169
Query: 140 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 199
V ++G GP+GL+++ A GA RI IA GA T ++ D+ +
Sbjct: 170 VCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNGDIVEQI 227
Query: 200 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV------------------CLIGL 241
K + G G+D G T + A+ +PG + +G+
Sbjct: 228 LKATD--GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGM 285
Query: 242 AKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIED 301
+ LTP ++ + + +GK+D LITHRF +K +ED
Sbjct: 286 GHKHIHGGLTPGGRVRMEKLA------------SLISTGKLDTSKLITHRFEGLEK-VED 332
Query: 302 AF 303
A
Sbjct: 333 AL 334
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 122/309 (39%), Gaps = 64/309 (20%)
Query: 30 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM-------- 81
M++GHE G + EVGSEVK + GDRV + S + G + M
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 82 -------RFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRAN 133
FF + +LAH LP + LE M + ++ G H A+
Sbjct: 115 VKDGVFGEFFHVNDADMNLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELAD 163
Query: 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 193
+ ++V+++G G +GL+ + A+ GA RII + A+ GA +
Sbjct: 164 IQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG-- 221
Query: 194 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI-------------- 239
+ V K+ N G G+D G +T+S A++ +PGG + I
Sbjct: 222 HIVDQVMKLTN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRV 279
Query: 240 ----GLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GF 294
G+A + L P R R + + F + ++D L+TH F GF
Sbjct: 280 EWGCGMAHKTIKGGLCPGG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGF 327
Query: 295 TQKEIEDAF 303
IE AF
Sbjct: 328 DN--IEKAF 334
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 86
+K M++GHE G + EVGSEVK + GDRV + P + SL + G
Sbjct: 52 RKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGW 110
Query: 87 PPTN------GSLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPET 138
+N G H V+ A + LP ++ LE M + ++ G H A++ +
Sbjct: 111 KFSNFKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGS 168
Query: 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST-DIEDVDT 197
+V+++G G +GL+ + A+ GA RII + A+ GA + IED
Sbjct: 169 SVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIED--- 225
Query: 198 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239
V K+ N G G+D G +T+S A+ +PGG + I
Sbjct: 226 QVMKLTN--GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNI 265
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 15/266 (5%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 88
P+++GHE AG I EVG E+ ++ GD V + C C+ G +N+C G
Sbjct: 60 PIILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTT 118
Query: 89 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA----NVGPETNVMIMG 144
G + +V ++ KL +E + + + + A R+A + E V++ G
Sbjct: 119 NGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNG 178
Query: 145 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 204
G + + T+ +A IT V + R R+ + A ++++D ++ + K+ +
Sbjct: 179 IGGLAVYTIQILKALMKN---ITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTD 235
Query: 205 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 264
+G+ I + D VG ++T G + L+G+ +++ A ++G
Sbjct: 236 GLGASI--AIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLG-S 292
Query: 265 RYRSTWPL--CIEFLRSGKIDVKPLI 288
Y S L + SGKI KP I
Sbjct: 293 NYGSLNDLEDVVRLSESGKI--KPYI 316
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 121/309 (39%), Gaps = 64/309 (20%)
Query: 30 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM-------- 81
M++GHE G + EVGSEVK + GDRV + S + G + M
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 82 -------RFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRAN 133
FF + +LAH LP + LE M + ++ G H A+
Sbjct: 115 VKDGVFGEFFHVNDADMNLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELAD 163
Query: 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 193
+ ++V+++G G +GL+ + A+ GA RII + A+ GA +
Sbjct: 164 IEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG-- 221
Query: 194 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI-------------- 239
+ V K+ N G G+D G +T+S A+ +PGG + I
Sbjct: 222 HIVDQVMKLTN--GKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRV 279
Query: 240 ----GLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GF 294
G+A + L P R R + + F + ++D L+TH F GF
Sbjct: 280 EWGCGMAHKTIKGGLCPGG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGF 327
Query: 295 TQKEIEDAF 303
IE AF
Sbjct: 328 DN--IEKAF 334
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 15/221 (6%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 86
+K M++GHE G + EVGSEVK + GDRV + P + SL + G
Sbjct: 52 RKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGW 110
Query: 87 PPTN------GSLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPET 138
+N G H V+ A + LP ++ LE M + ++ G H A++ +
Sbjct: 111 KFSNFKDGVFGEYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGS 168
Query: 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 198
+V+++G G +GL+ + A+ GA RII + A+ GA + +
Sbjct: 169 SVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQ 226
Query: 199 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239
V K+ N G G+D G +T+S A++ +PGG + I
Sbjct: 227 VMKLTN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNI 265
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 19/240 (7%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEM------ 81
P+V GHE G + EVGS+VK + VGD+V + + +C C C N CP+M
Sbjct: 71 PLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYAS 130
Query: 82 RFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETN 139
+ T G ++ +V + + PDN+ L+ GA +C ++V P +
Sbjct: 131 IYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKH 190
Query: 140 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 199
+ I+G G +G V + A+AFG+ +I+ ++ +N GAD + VS D E
Sbjct: 191 IGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD-SFLVSRDQE------ 243
Query: 200 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV-ALTPAAAREV 258
++Q A G+ +D D V + + GK+ L+G + + + A + A R++
Sbjct: 244 -QMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKI 301
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 31/229 (13%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRV----------ALE-----PGISCGHCSLCK 71
+K M++GHE G + EVGSEVK + GDRV +LE P S G + K
Sbjct: 52 RKNMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWK 111
Query: 72 AGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM-CEPLSVGVHACR 130
++ +F + +LA LP ++ LE M + ++ G H
Sbjct: 112 FSNFKDGVFGEYFHVNDADMNLA-----------ILPKDMPLENAVMITDMMTTGFHGAE 160
Query: 131 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 190
A++ ++V+++G G +GL+ + A+ GA RII + A+ GA +
Sbjct: 161 LADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKN 220
Query: 191 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239
+ V K+ N G G+D G +T+S A++ +PGG + I
Sbjct: 221 G--HIVDQVMKLTN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNI 265
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 117/300 (39%), Gaps = 46/300 (15%)
Query: 30 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM-------- 81
M++GHE G + EVGSEVK + GDRV + S + G + M
Sbjct: 55 MILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSN 114
Query: 82 -------RFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRAN 133
FF + +LAH LP + LE M + ++ G H AN
Sbjct: 115 VKDGVFGEFFHVNDADMNLAH-----------LPKEIPLEAAVMIPDMMTTGFHGAELAN 163
Query: 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 193
+ V ++G GP+GL+++ A GA RI IA GA T ++
Sbjct: 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNG 221
Query: 194 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG---GKVCLIG------LAKT 244
D+ + K + G G+D G T + A+ +PG G V +G + ++
Sbjct: 222 DIVEQILKATD--GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRS 279
Query: 245 EMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 303
E V + G R I+ + ++D L+TH F GF IE AF
Sbjct: 280 EWGVGMGHKHIHGGLCPG---GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 88
P+V+G E A ++EEVG V VG+RV C+ P
Sbjct: 61 PIVVGFEAAAVVEEVGPGVTDFTVGERV----------CTCL-----------------P 93
Query: 89 TNGSLAHKVVHPAKLCYKLPDNVSLEE----GAMCEPLSVGVHACRRANVGPETNVMIM- 143
G+ + + ++PA+ K+P ++ L++ G M + ++ + V P V+I
Sbjct: 94 PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHA 153
Query: 144 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 203
+G +G + + AR GA +I T ++ AR LG T ST +D V +I
Sbjct: 154 AAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREIT 210
Query: 204 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 242
G G+DV +D +G D T+ +L+ RP G G A
Sbjct: 211 G--GKGVDVVYDSIGKD-TLQKSLDCLRPRGMCAAYGHA 246
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 104/234 (44%), Gaps = 39/234 (16%)
Query: 12 NVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCK 71
+ Y + A F+ P +G E AG++E VG EV +VGDRVA
Sbjct: 44 DTYYRSGLYPAPFL---PSGLGAEGAGVVEAVGDEVTRFKVGDRVA-------------- 86
Query: 72 AGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHAC 129
+G+ P G+ + V P KL D+VS E+ A M + L+V
Sbjct: 87 ------------YGTGPL-GAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLR 133
Query: 130 RRANVGP-ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 188
+ V P E + +G +G + A+A GA ++I T ++ + A+ LGA ET
Sbjct: 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDY 192
Query: 189 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 242
S EDV V ++ + G V +D VG D T T+L++ P G V G A
Sbjct: 193 SH--EDVAKRVLELTD--GKKCPVVYDGVGQD-TWLTSLDSVAPRGLVVSFGNA 241
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 39/170 (22%)
Query: 25 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 84
+ K P V+G + G++E VG+EV GD V +
Sbjct: 56 VSKAPRVLGFDAIGVVESVGNEVTMFNQGDIV-------------------------YYS 90
Query: 85 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS-----------VGVHACRRAN 133
GSP NGS A + +L K P N+S E+ A+ PL+ G+ R N
Sbjct: 91 GSPDQNGSNAEYQLINERLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNEN 149
Query: 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 183
G +T ++I G+G +G + A+A+G R+I T + + + +GAD
Sbjct: 150 EG-KTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGAD 197
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 11/220 (5%)
Query: 26 VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFF 84
VK P+V GHE AG++ +G VK ++GD ++ SC C C+ G+ + CP
Sbjct: 58 VKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS 117
Query: 85 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMI 142
G +GS A +P L + A +C ++V A + AN+ V I
Sbjct: 118 GY-THDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAI 175
Query: 143 MG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 201
G +G +G + + A+A G R++ D + + R++G + V D VG
Sbjct: 176 SGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGE----VFIDFTKEKDIVGA 230
Query: 202 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 241
+ A G + + + + R G L+G+
Sbjct: 231 VLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM 270
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 33/237 (13%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEM------ 81
PM+ GHE AGII+EVG VK ++GD V + + SC C CK C ++
Sbjct: 59 PMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDC 118
Query: 82 --RFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPE 137
F + P G ++ +V + N LE+ A +C ++ + + V
Sbjct: 119 LDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKG 177
Query: 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 197
T V + G G +G + + A A GA +V V ARN + A +S ++ T
Sbjct: 178 TKVGVAGFGGLGSMAVKYAVAMGA------EVSV----FARNEHKKQDA-LSMGVKHFYT 226
Query: 198 DVGKIQNAMG---SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT 251
D + + + S I +D + K ++ G + L+GL E+ L+
Sbjct: 227 DPKQCKEELDFIISTIPTHYDLKDYLKLLTY-------NGDLALVGLPPVEVAPVLS 276
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 86/217 (39%), Gaps = 40/217 (18%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 86
K P+V G EC+GI+E +G VK E+GDRV +YN E+
Sbjct: 59 KTPLVPGFECSGIVEALGDSVKGYEIGDRV-------------MAFVNYNAWAEV----- 100
Query: 87 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNVMIMG 144
V P + YK+PD++S E A ++ V AN+ +V++
Sbjct: 101 ----------VCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHS 150
Query: 145 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD-VGKIQ 203
+G G+ +A P + + A + T + D + D V +++
Sbjct: 151 AGG-GVGQAVAQLCSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVK 202
Query: 204 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240
G+D+ DC+ D T L+ +P G L G
Sbjct: 203 RISAEGVDIVLDCLCGDNT-GKGLSLLKPLGTYILYG 238
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 43/247 (17%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 88
P G + AG+IE VG + + GDRV IS G+ A + +
Sbjct: 88 PYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTV----------- 136
Query: 89 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-S 145
YKLP+ + ++GA P A A V +V++ G S
Sbjct: 137 ----------------YKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGAS 180
Query: 146 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 205
G +GL ARA+G +I+ T + I GA E ++ +D KI+
Sbjct: 181 GGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN-HREVNYID----KIKKY 234
Query: 206 MG-SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP--AAAREVDVIG 262
+G GID+ + + + +S L+ GG+V ++G + T+ + P A+E +IG
Sbjct: 235 VGEKGIDIIIEMLA-NVNLSKDLSLLSHGGRVIVVG---SRGTIEINPRDTMAKESSIIG 290
Query: 263 IFRYRST 269
+ + ST
Sbjct: 291 VTLFSST 297
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 26/277 (9%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRV--ALEPGISCGHCSLCKAGSYNLCPEMRFFGS 86
P V + +G++E VG V GDRV PG G + G+ G+
Sbjct: 84 PFVPASDXSGVVEAVGKSVTRFRPGDRVISTFAPGWLDG----LRPGTGRTPAYETLGGA 139
Query: 87 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNVMIMG 144
P G L+ VV P P ++ E + C L+ + ++ V++ G
Sbjct: 140 HP--GVLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQG 197
Query: 145 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD-VGKIQ 203
+G + L L A+A GA +I+T ++L A LGAD I ++ D V ++
Sbjct: 198 TGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADH------GINRLEEDWVERVY 250
Query: 204 NAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAARE--VD 259
G G D + G + +L A P G++ +IG L E++ + P + V
Sbjct: 251 ALTGDRGADHILEIAG-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQ 309
Query: 260 VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQ 296
I + R+ L R G +KP+I R+ FT+
Sbjct: 310 GISVGHRRALEDLVGAVDRLG---LKPVIDXRYKFTE 343
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 86/222 (38%), Gaps = 40/222 (18%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 86
+KP V+G E +G + G V + EVGD+VA + S + P M
Sbjct: 62 EKPYVLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQG----PVM----- 112
Query: 87 PPTNGSLAHKVVHPAKLCYKLPDNVSLEE-----GAMCEPLSVGVHACRRANVGPETNVM 141
KLP S EE + + L+ +V V+
Sbjct: 113 -------------------KLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVL 153
Query: 142 IMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 200
+ + G +GL+ + GA I + D ++L IA+ GA+ S ED+ V
Sbjct: 154 LFAAAGGVGLILNQLLKMKGAHTIAVASTD-EKLKIAKEYGAEYLINASK--EDILRQVL 210
Query: 201 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 242
K N G G+D SFD VG D T +L A + G G A
Sbjct: 211 KFTN--GKGVDASFDSVGKD-TFEISLAALKRKGVFVSFGNA 249
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 92/230 (40%), Gaps = 31/230 (13%)
Query: 31 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN---LCPEMRFFGSP 87
VIG + AG++ G V + + GD V C L + +N L PE R +G
Sbjct: 120 VIGSDLAGVVLRTGPGVNAWQAGDEVVAH----CLSVELESSDGHNDTMLDPEQRIWGFE 175
Query: 88 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR------ANVGPETNVM 141
G LA + + PD++S EE A P V A R+ A + NV+
Sbjct: 176 TNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRNGAGMKQGDNVL 233
Query: 142 IMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA----DETAKVSTDIEDVD 196
I G SG +G A A GA I + Q+ I R +GA D A+ +D +
Sbjct: 234 IWGASGGLGSYATQFALAGGANPICVVS-SPQKAEICRAMGAEAIIDRNAEGYRFWKDEN 292
Query: 197 TDVGKIQNAM---------GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237
T K G ID+ F+ G +T ++ TR GG +
Sbjct: 293 TQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGTIT 341
>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From Haloferax
Mediterranei
pdb|2VWG|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Gluconolactone.
pdb|2VWH|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Glucose.
pdb|2VWP|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadph And Zn.
pdb|2VWQ|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp And Zn
Length = 357
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 44/236 (18%)
Query: 30 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI----SCGHCSLCKAGSYNLCPEMRFF- 84
+V+GHE G++ V LE GD V P + + G + ++ P+ +F
Sbjct: 59 LVLGHEAVGVV--VDPNDTELEEGDIVV--PTVRRPPASGTNEYFERDQPDMAPDGMYFE 114
Query: 85 -GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV------GVHACRRANVGPE 137
G +G ++ P K ++P + + E G + EP+S+ +A R A
Sbjct: 115 RGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDP 173
Query: 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVD 196
++ ++G+G +GL+TL + + D + L + R D T + IE++D
Sbjct: 174 SSAFVLGNGSLGLLTLAMLK--------VDDKGYENLYCLGRRDRPDPTIDI---IEELD 222
Query: 197 T-----------DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 241
DV + M D ++ GF K ++ A P G L+G+
Sbjct: 223 ATYVDSRQTPVEDVPDVYEQM----DFIYEATGFPKHAIQSVQALAPNGVGALLGV 274
>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CD9|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CDA|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
pdb|2CDA|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
Length = 366
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 22/151 (14%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--F 84
K +V+GHE G++EE GD V CG C C G + C F
Sbjct: 59 KDFLVLGHEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEA 115
Query: 85 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS---------------VGVHAC 129
G +G + K K+P ++ + G + +PL+ V V C
Sbjct: 116 GIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTC 174
Query: 130 RRANVGPETNVMIMGSGPIGLVTLLAARAFG 160
+ V+++G+GPIG++ L R +G
Sbjct: 175 DDGTLNCR-KVLVVGTGPIGVLFTLLFRTYG 204
>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant
From Haloferax Mediterranei
Length = 357
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 30 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI----SCGHCSLCKAGSYNLCPEMRFF- 84
+V+GHE G++ V LE GD V P + + G + ++ P+ +F
Sbjct: 59 LVLGHEAVGVV--VDPNDTELEEGDIVV--PTVRRPPASGTNEYFERDQPDMAPDGMYFE 114
Query: 85 -GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV------GVHACRRANVGPE 137
G +G ++ P K ++P + + E G + EP+S+ +A R A
Sbjct: 115 RGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDP 173
Query: 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKV-----STD 191
++ ++G+G +GL+TL + + D + L + R D T + +T
Sbjct: 174 SSAFVLGNGSLGLLTLAMLK--------VDDKGYENLYCLGRRDRPDPTIDIIEELDATY 225
Query: 192 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 241
++ T V + + +D ++ GF K ++ A P G L+G+
Sbjct: 226 VDSRQTPVEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPNGVGALLGV 274
>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDC|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
Length = 366
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 22/151 (14%)
Query: 27 KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--F 84
K +V+GHE G++EE GD V CG C C G + C F
Sbjct: 59 KDFLVLGHEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEA 115
Query: 85 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS---------------VGVHAC 129
G +G + K K+P ++ + G + +PL+ V V C
Sbjct: 116 GIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTC 174
Query: 130 RRANVGPETNVMIMGSGPIGLVTLLAARAFG 160
+ V+++G+GPIG++ L R +G
Sbjct: 175 DDGTLNCR-KVLVVGTGPIGVLFTLLFRTYG 204
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 69/169 (40%), Gaps = 17/169 (10%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSP 87
P V GHE G + VG +V+ GD V + + SC HC C+ G N C M +
Sbjct: 77 PCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNS 136
Query: 88 PTNGSLAHK--------VVHPAKLCYKLPDNVSLEEGAMCEPLSVG----VHACRRANVG 135
PT H VVH Y L E+ A PL R G
Sbjct: 137 PTPDEPGHTLGGYSQQIVVHER---YVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAG 193
Query: 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 184
P V ++G G +G + + A A GA + T + +R A+ LGADE
Sbjct: 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADE 241
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 30/251 (11%)
Query: 26 VKKPMVIGHECAGIIEEVGSEVKS-LEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRF 83
+K P+V+GHE G + ++G + S L+VG RV + + SC C CK + C +
Sbjct: 60 MKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVT 119
Query: 84 FGSPP------TNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVG 135
S P + G A+ V +P+N+ A +C L+V R G
Sbjct: 120 TYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTV-YSPLVRNGCG 178
Query: 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV 195
P V I+G G IG + L ++A GA +I+ +R A +GAD ++T +E+
Sbjct: 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRED-AMKMGADHY--IAT-LEEG 234
Query: 196 DTDVGKIQNAMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLAKTEMTVA 249
D G +FD + D + A + GG++ I + + ++
Sbjct: 235 D---------WGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLS 285
Query: 250 LTPAAAREVDV 260
L P + V +
Sbjct: 286 LKPYGLKAVSI 296
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 35/195 (17%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 88
P +G E AGI+ +VGS VK ++ GDRV + G+Y
Sbjct: 58 PSGLGTEAAGIVSKVGSGVKHIKAGDRVVY---------AQSALGAY------------- 95
Query: 89 TNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMI-MGS 145
S H ++ A LP +S E+ A + L+V + + P+ + +
Sbjct: 96 ---SSVHNII--ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAA 150
Query: 146 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 205
G +GL+ A+A GA ++I T Q+ A GA + ++ ED+ + +I
Sbjct: 151 GGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQV--INYREEDLVERLKEITG- 206
Query: 206 MGSGIDVSFDCVGFD 220
G + V +D VG D
Sbjct: 207 -GKKVRVVYDSVGRD 220
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 90/233 (38%), Gaps = 37/233 (15%)
Query: 31 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN------LCPEMRFF 84
+IG + AG++ G V + + GD V HC + S + L PE R +
Sbjct: 138 IIGSDLAGVVLRTGPGVNAWQPGDEV-------VAHCLSVELESPDGHDDTMLDPEQRIW 190
Query: 85 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR------ANVGPET 138
G G LA + P +++ EE A P V A R+ A +
Sbjct: 191 GFETNFGGLAEIALVKTNQLMPKPKHLTWEEAAA--PGLVNSTAYRQLVSRNGAAMKQGD 248
Query: 139 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA----DETAKVSTDIE 193
NV+I G SG +G A A GA I + Q+ I R++GA D A+ +
Sbjct: 249 NVLIWGASGGLGSYATQFALAGGANPICVVS-SPQKAEICRSMGAEAIIDRNAEGYKFWK 307
Query: 194 DVDTDVGKIQNAM---------GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237
D T K G ID+ F+ G +T ++ TR GG +
Sbjct: 308 DEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVYVTRKGGTIT 359
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 26/119 (21%)
Query: 31 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN 90
V G + AG+I +VG++V S +G RVA H SL + GS+
Sbjct: 61 VPGVDGAGVIVKVGAKVDSKXLGRRVAY-------HTSLKRHGSF--------------- 98
Query: 91 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPI 148
A V LPDN+S E A PL A + + + V+I+G G +
Sbjct: 99 ---AEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAV 154
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 22/87 (25%)
Query: 32 IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN-LCPEMRFFGSPPTN 90
+G + AG + VGS+V ++VGDRV G+ N +CP P
Sbjct: 66 LGTDYAGTVVAVGSDVTHIQVGDRV---------------YGAQNEMCPRT------PDQ 104
Query: 91 GSLAHKVVHPAKLCYKLPDNVSLEEGA 117
G+ + V ++ K+P +S E+ A
Sbjct: 105 GAFSQYTVTRGRVWAKIPKGLSFEQAA 131
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 22/87 (25%)
Query: 32 IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN-LCPEMRFFGSPPTN 90
+G + AG + VGS+V ++VGDRV G+ N +CP P
Sbjct: 66 LGTDYAGTVVAVGSDVTHIQVGDRV---------------YGAQNEMCPRT------PDQ 104
Query: 91 GSLAHKVVHPAKLCYKLPDNVSLEEGA 117
G+ + V ++ K+P +S E+ A
Sbjct: 105 GAFSQYTVTRGRVWAKIPKGLSFEQAA 131
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 112/309 (36%), Gaps = 63/309 (20%)
Query: 31 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN---LCPEMRFFGSP 87
++G E +G I VG V VGD+V C L G+Y L P + P
Sbjct: 88 ILGLELSGEIVGVGPGVSGYAVGDKV----------CGLANGGAYAEYCLLPAGQIL--P 135
Query: 88 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGP 147
G A K + + + N+ + + E SV +H G+
Sbjct: 136 FPKGYDAVKAAALPETFFTVWANL-FQXAGLTEGESVLIHG---------------GTSG 179
Query: 148 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV-STDIEDVDTDVGKIQNAM 206
IG + ARAFGA + T + LGA S D V I+
Sbjct: 180 IGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRSEDFAAV------IKAET 232
Query: 207 GSGIDVSFDCVG---FDKTMST----------ALNATRPGGKVCLIGLAKTEMTVALT-- 251
G G+D+ D +G F++ +++ A KV L + +TV +
Sbjct: 233 GQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIXVKRLTVTGSTX 292
Query: 252 -PAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 310
P A E I WPL L +G V P+I F F +++ DA + +G
Sbjct: 293 RPRTAEEKRAIRDDLLSEVWPL----LEAGT--VAPVIHKVFAF--EDVADAHRLLEEGS 344
Query: 311 NAIKVMFNL 319
+ KV +
Sbjct: 345 HVGKVXLTV 353
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 13/161 (8%)
Query: 31 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN 90
V+G +C+G++ G V+ + GD V + P G L E R +G
Sbjct: 112 VLGSDCSGVVVRTGIGVRRWKPGDHVIVHPA-HVDEQEPATHGDGMLGTEQRAWGFETNF 170
Query: 91 GSLA-HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNVMIMG 144
G LA + VV ++L K P +++ EE A+ PL G + R A + V+I G
Sbjct: 171 GGLAEYGVVRASQLLPK-PAHLTWEEAAVS-PLCAGTAYRMLVSDRGAQMKQGDIVLIWG 228
Query: 145 -SGPIGLVTL-LAARAFGAPRIIITDVDVQRLSIARNLGAD 183
SG +G + G P +++ Q+ + R LG D
Sbjct: 229 ASGGLGSYAIQFVKNGGGIPVAVVS--SAQKEAAVRALGCD 267
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 19/233 (8%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGD-RVALEPGISCGHCSLCKAGSYNLCPEM------ 81
PMV GHE G + EVGS+V VGD CG CS C+ CP+
Sbjct: 64 PMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYND 123
Query: 82 RFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETN 139
+ PT G A V K K+P+ +++E+ A +C ++V P
Sbjct: 124 VYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLR 183
Query: 140 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 199
I+G G +G + + A+A G +I+ + +R ++LGAD+ + +D
Sbjct: 184 GGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYV--------IGSDQ 235
Query: 200 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP 252
K+ + + +D D V + L+ + GK+ L+G+ + LTP
Sbjct: 236 AKM-SELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQF-LTP 286
>pdb|3GU9|A Chain A, R228a Mutation In Organophosphorus Hydrolase From
Deinococcu Radiodurans
Length = 331
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 172 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 193 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDAIGLQGMVGTPTDAER 251
Query: 232 PGGKVCLIG 240
L+G
Sbjct: 252 LSVLTTLLG 260
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 29 PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 88
P ++G + AG + VG EV S VGD V G++ G L + + R S P
Sbjct: 64 PAILGXDLAGTVVAVGPEVDSFRVGDAVF---GLTGGVGGLQGTHAQFAAVDARLLASKP 120
>pdb|3GTF|A Chain A, D71gE101GV235L MUTANT IN ORGANOPHOSPHORUS HYDROLASE FROM D
Radiodurans
Length = 337
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 172 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 199 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMLGTPTDAER 257
Query: 232 PGGKVCLIG 240
L+G
Sbjct: 258 LSVLTTLLG 266
>pdb|3GU2|A Chain A, Y97lG100-E101- Mutant In Organophosphorus Hydrolase
Length = 336
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 172 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 198 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 256
Query: 232 PGGKVCLIG 240
L+G
Sbjct: 257 LSVLTTLLG 265
>pdb|3FDK|A Chain A, Crystal Structure Of Hydrolase Dr0930 With Promiscuous
Catalytic Activity
Length = 323
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 172 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 185 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 243
Query: 232 PGGKVCLIG 240
L+G
Sbjct: 244 LSVLTTLLG 252
>pdb|3HTW|A Chain A, Organophosphorus Hydrolase From Deinococcus Radiodurans
With Cacodylate Bound
Length = 328
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 172 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 190 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 248
Query: 232 PGGKVCLIG 240
L+G
Sbjct: 249 LSVLTTLLG 257
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 12 NVVYDQTMRCANFIVKK-----PMVIGHECAGIIEEVGSEVKSLEVGDRV 56
N + +T + F+ KK P +G++ +G + E+GS+V ++ +GD+V
Sbjct: 46 NPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNNVNIGDKV 95
>pdb|3GTX|A Chain A, D71gE101G MUTANT IN ORGANOPHOSPHORUS HYDROLASE FROM
DEINOCO Radiodurans
Length = 339
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 172 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 201 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 259
Query: 232 PGGKVCLIG 240
L+G
Sbjct: 260 LSVLTTLLG 268
>pdb|2ZC1|A Chain A, Organophosphorus Hydrolase From Deinococcus Radiodurans
Length = 333
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 172 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 195 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 253
Query: 232 PGGKVCLIG 240
L+G
Sbjct: 254 LSVLTTLLG 262
>pdb|3GTI|A Chain A, D71gE101GM234L MUTANT IN ORGANOPHOSPHORUS HYDROLASE FROM D
Radiodurans
Length = 337
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 172 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 199 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGLVGTPTDAER 257
Query: 232 PGGKVCLIG 240
L+G
Sbjct: 258 LSVLTTLLG 266
>pdb|3GU1|A Chain A, Y97w Mutant In Organophosphorus Hydrolase From Deinococcus
Radiodurans
Length = 337
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 172 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 199 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAER 257
Query: 232 PGGKVCLIG 240
L+G
Sbjct: 258 LSVLTTLLG 266
>pdb|3GTH|A Chain A, D71gE101GM234I MUTANT IN ORGANOPHOSPHORUS HYDROLASE FROM D
Radiodurans
Length = 337
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 172 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231
Q+ + +LGAD A++ D +TD + + G+ ++FD +G + T +A R
Sbjct: 199 QQAELLTSLGADP-ARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGIVGTPTDAER 257
Query: 232 PGGKVCLIG 240
L+G
Sbjct: 258 LSVLTTLLG 266
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,252,144
Number of Sequences: 62578
Number of extensions: 383813
Number of successful extensions: 1389
Number of sequences better than 100.0: 121
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1091
Number of HSP's gapped (non-prelim): 155
length of query: 319
length of database: 14,973,337
effective HSP length: 99
effective length of query: 220
effective length of database: 8,778,115
effective search space: 1931185300
effective search space used: 1931185300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)