Query 020928
Match_columns 319
No_of_seqs 142 out of 1531
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 06:16:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020928.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020928hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0024 Sorbitol dehydrogenase 100.0 7.4E-60 1.6E-64 390.5 27.8 314 1-318 34-351 (354)
2 COG1064 AdhP Zn-dependent alco 100.0 1.2E-56 2.5E-61 383.1 26.8 300 1-319 33-337 (339)
3 PRK09880 L-idonate 5-dehydroge 100.0 2.2E-51 4.7E-56 365.6 32.7 308 1-319 32-343 (343)
4 COG1062 AdhC Zn-dependent alco 100.0 7.3E-50 1.6E-54 334.1 25.3 308 1-319 32-366 (366)
5 COG1063 Tdh Threonine dehydrog 100.0 1.7E-48 3.7E-53 345.4 31.7 309 1-319 30-350 (350)
6 KOG0023 Alcohol dehydrogenase, 100.0 1.6E-48 3.6E-53 322.3 24.6 304 1-319 41-354 (360)
7 cd08239 THR_DH_like L-threonin 100.0 1.9E-47 4.2E-52 340.0 32.4 308 1-319 29-339 (339)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 7.3E-47 1.6E-51 339.9 32.1 306 1-317 38-371 (371)
9 PLN02740 Alcohol dehydrogenase 100.0 2.6E-46 5.6E-51 337.2 31.0 311 1-319 40-381 (381)
10 PLN02827 Alcohol dehydrogenase 100.0 8.3E-46 1.8E-50 333.1 31.3 307 1-319 42-376 (378)
11 PRK10309 galactitol-1-phosphat 100.0 1.5E-45 3.2E-50 328.8 32.6 307 1-319 30-346 (347)
12 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.2E-45 2.6E-50 331.4 31.5 309 1-319 31-368 (368)
13 TIGR02819 fdhA_non_GSH formald 100.0 1E-45 2.3E-50 333.0 29.6 308 1-319 38-390 (393)
14 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.3E-45 5E-50 328.7 31.1 307 1-318 31-357 (358)
15 KOG0022 Alcohol dehydrogenase, 100.0 1.7E-45 3.6E-50 303.0 26.3 310 1-319 37-375 (375)
16 PLN02586 probable cinnamyl alc 100.0 3.9E-45 8.4E-50 326.8 29.9 301 1-319 42-353 (360)
17 cd08301 alcohol_DH_plants Plan 100.0 7.4E-45 1.6E-49 326.8 31.6 308 1-317 32-368 (369)
18 PLN02178 cinnamyl-alcohol dehy 100.0 4.6E-45 9.9E-50 327.3 29.5 301 1-319 36-348 (375)
19 cd08300 alcohol_DH_class_III c 100.0 1.1E-44 2.5E-49 325.3 31.7 308 1-318 32-368 (368)
20 TIGR03201 dearomat_had 6-hydro 100.0 1.2E-44 2.5E-49 323.1 31.5 309 1-319 28-349 (349)
21 COG0604 Qor NADPH:quinone redu 100.0 6.8E-45 1.5E-49 318.3 28.3 282 1-319 32-326 (326)
22 cd08277 liver_alcohol_DH_like 100.0 4.9E-44 1.1E-48 320.8 31.5 307 1-318 32-365 (365)
23 TIGR02822 adh_fam_2 zinc-bindi 100.0 4.6E-44 9.9E-49 316.3 29.7 293 1-317 32-328 (329)
24 PLN02702 L-idonate 5-dehydroge 100.0 1.9E-43 4E-48 317.3 33.4 318 1-318 46-363 (364)
25 cd08233 butanediol_DH_like (2R 100.0 2.3E-43 5E-48 315.2 33.2 312 1-318 29-351 (351)
26 cd08230 glucose_DH Glucose deh 100.0 9.7E-44 2.1E-48 318.0 30.0 303 1-319 30-355 (355)
27 cd08237 ribitol-5-phosphate_DH 100.0 4.5E-43 9.8E-48 311.5 25.8 297 1-319 30-339 (341)
28 PLN02514 cinnamyl-alcohol dehy 100.0 7.8E-42 1.7E-46 305.5 30.1 301 1-319 39-350 (357)
29 KOG1197 Predicted quinone oxid 100.0 1.2E-42 2.6E-47 277.9 19.4 277 1-318 40-329 (336)
30 cd08231 MDR_TM0436_like Hypoth 100.0 5.9E-41 1.3E-45 300.8 32.6 310 1-318 30-360 (361)
31 cd05285 sorbitol_DH Sorbitol d 100.0 9.4E-41 2E-45 297.5 32.2 312 1-318 27-342 (343)
32 PRK10083 putative oxidoreducta 100.0 2.4E-40 5.1E-45 294.5 31.8 307 1-319 29-337 (339)
33 TIGR01202 bchC 2-desacetyl-2-h 100.0 4.1E-41 8.9E-46 294.9 26.4 277 1-318 30-308 (308)
34 TIGR03366 HpnZ_proposed putati 100.0 3.8E-41 8.3E-46 291.4 25.4 260 31-298 1-279 (280)
35 cd08285 NADP_ADH NADP(H)-depen 100.0 5.5E-40 1.2E-44 293.5 32.1 310 1-319 29-351 (351)
36 cd08299 alcohol_DH_class_I_II_ 100.0 6E-40 1.3E-44 294.9 32.2 309 1-319 37-373 (373)
37 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.2E-39 2.6E-44 291.1 32.8 311 1-317 29-350 (350)
38 cd08238 sorbose_phosphate_red 100.0 7.2E-40 1.6E-44 297.8 30.4 301 1-319 31-368 (410)
39 cd08232 idonate-5-DH L-idonate 100.0 2.6E-39 5.6E-44 287.9 32.0 310 1-319 26-339 (339)
40 cd05279 Zn_ADH1 Liver alcohol 100.0 7.3E-39 1.6E-43 287.4 31.4 306 1-317 30-364 (365)
41 cd08296 CAD_like Cinnamyl alco 100.0 6.8E-39 1.5E-43 284.4 30.5 301 1-318 30-333 (333)
42 cd05284 arabinose_DH_like D-ar 100.0 1E-38 2.3E-43 284.1 31.1 306 1-319 30-340 (340)
43 PRK05396 tdh L-threonine 3-deh 100.0 1.3E-38 2.8E-43 283.5 31.7 309 1-319 30-340 (341)
44 cd08283 FDH_like_1 Glutathione 100.0 2.4E-38 5.1E-43 285.9 32.0 310 1-318 30-385 (386)
45 cd08246 crotonyl_coA_red croto 100.0 1.9E-38 4.1E-43 287.6 30.9 309 1-317 47-391 (393)
46 cd08265 Zn_ADH3 Alcohol dehydr 100.0 2.7E-38 5.9E-43 285.4 31.3 311 1-317 56-383 (384)
47 cd08262 Zn_ADH8 Alcohol dehydr 100.0 5.2E-38 1.1E-42 279.7 31.4 302 1-318 28-341 (341)
48 cd08278 benzyl_alcohol_DH Benz 100.0 4.8E-38 1E-42 282.1 31.1 304 1-318 32-365 (365)
49 cd08286 FDH_like_ADH2 formalde 100.0 8.4E-38 1.8E-42 278.8 32.0 310 1-319 30-345 (345)
50 cd05278 FDH_like Formaldehyde 100.0 5.7E-38 1.2E-42 280.1 30.2 309 1-318 30-346 (347)
51 cd08235 iditol_2_DH_like L-idi 100.0 1.4E-37 3.1E-42 277.1 32.2 307 1-318 29-343 (343)
52 cd08242 MDR_like Medium chain 100.0 1.1E-37 2.4E-42 275.1 30.5 290 1-318 29-318 (319)
53 cd08284 FDH_like_2 Glutathione 100.0 1.3E-37 2.7E-42 277.6 31.1 306 1-318 30-343 (344)
54 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.2E-37 2.6E-42 280.0 30.9 308 1-318 30-367 (367)
55 cd08287 FDH_like_ADH3 formalde 100.0 2.5E-37 5.5E-42 275.7 31.3 306 1-318 30-344 (345)
56 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.4E-37 5.2E-42 276.4 30.7 309 1-319 30-350 (350)
57 cd05283 CAD1 Cinnamyl alcohol 100.0 1.9E-37 4.1E-42 275.5 28.9 300 1-318 29-337 (337)
58 TIGR00692 tdh L-threonine 3-de 100.0 5.1E-37 1.1E-41 273.1 31.4 310 1-319 28-340 (340)
59 cd05281 TDH Threonine dehydrog 100.0 5.9E-37 1.3E-41 272.9 31.5 308 1-318 30-340 (341)
60 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1E-36 2.3E-41 270.9 32.8 307 1-319 29-337 (337)
61 cd08260 Zn_ADH6 Alcohol dehydr 100.0 7.3E-37 1.6E-41 272.7 31.1 307 1-318 30-344 (345)
62 cd08236 sugar_DH NAD(P)-depend 100.0 9.9E-37 2.1E-41 271.7 31.7 305 1-317 29-343 (343)
63 cd08279 Zn_ADH_class_III Class 100.0 7.1E-37 1.5E-41 274.4 30.9 306 1-316 30-362 (363)
64 cd08282 PFDH_like Pseudomonas 100.0 7.3E-37 1.6E-41 275.4 31.1 306 1-319 30-375 (375)
65 TIGR01751 crot-CoA-red crotony 100.0 5.8E-37 1.2E-41 278.1 30.0 311 1-319 42-387 (398)
66 PLN03154 putative allyl alcoho 100.0 4E-37 8.7E-42 273.9 27.4 275 1-319 48-345 (348)
67 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 4.8E-36 1E-40 266.6 31.2 305 1-319 31-338 (338)
68 cd08234 threonine_DH_like L-th 100.0 5.9E-36 1.3E-40 265.7 31.2 303 1-317 29-333 (334)
69 cd08291 ETR_like_1 2-enoyl thi 100.0 1.1E-36 2.4E-41 269.2 26.1 277 1-318 35-324 (324)
70 PRK09422 ethanol-active dehydr 100.0 6E-36 1.3E-40 266.1 30.2 303 1-319 30-336 (338)
71 KOG0025 Zn2+-binding dehydroge 100.0 1.4E-36 3.1E-41 247.3 23.6 280 1-318 52-351 (354)
72 cd08293 PTGR2 Prostaglandin re 100.0 7.1E-36 1.5E-40 266.4 27.3 279 1-319 41-345 (345)
73 cd08297 CAD3 Cinnamyl alcohol 100.0 3.9E-35 8.5E-40 261.2 31.3 306 1-319 31-341 (341)
74 PRK13771 putative alcohol dehy 100.0 1.5E-35 3.2E-40 263.2 28.0 298 1-318 30-332 (334)
75 cd08259 Zn_ADH5 Alcohol dehydr 100.0 4.4E-35 9.5E-40 259.8 29.9 299 1-318 30-332 (332)
76 cd08295 double_bond_reductase_ 100.0 1.9E-35 4.1E-40 262.9 26.9 276 1-319 42-338 (338)
77 cd08274 MDR9 Medium chain dehy 100.0 3.1E-35 6.7E-40 262.8 27.7 297 1-319 33-350 (350)
78 cd08298 CAD2 Cinnamyl alcohol 100.0 6.6E-35 1.4E-39 258.5 28.6 292 1-317 34-329 (329)
79 cd08266 Zn_ADH_like1 Alcohol d 100.0 2.1E-34 4.5E-39 256.2 29.8 306 1-319 32-342 (342)
80 cd08264 Zn_ADH_like2 Alcohol d 100.0 8.4E-35 1.8E-39 257.4 27.0 291 1-316 31-325 (325)
81 cd08292 ETR_like_2 2-enoyl thi 100.0 1.1E-34 2.3E-39 256.6 27.2 278 1-318 33-324 (324)
82 TIGR02825 B4_12hDH leukotriene 100.0 1.1E-34 2.3E-39 256.7 26.6 268 1-318 36-325 (325)
83 cd08294 leukotriene_B4_DH_like 100.0 4.4E-34 9.5E-39 253.2 27.0 268 1-319 38-329 (329)
84 cd08245 CAD Cinnamyl alcohol d 100.0 1.2E-33 2.6E-38 250.5 28.1 298 1-317 29-330 (330)
85 cd08269 Zn_ADH9 Alcohol dehydr 100.0 5.9E-33 1.3E-37 244.1 30.0 279 1-317 24-311 (312)
86 cd08244 MDR_enoyl_red Possible 100.0 4.4E-33 9.6E-38 246.2 28.2 283 1-319 32-324 (324)
87 cd08258 Zn_ADH4 Alcohol dehydr 100.0 7E-33 1.5E-37 242.8 27.2 270 1-280 31-306 (306)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 9.9E-33 2.1E-37 245.3 27.6 278 1-318 34-334 (336)
89 cd05188 MDR Medium chain reduc 100.0 5.2E-32 1.1E-36 233.0 26.4 263 1-276 4-270 (271)
90 KOG1198 Zinc-binding oxidoredu 100.0 9.5E-33 2.1E-37 241.7 20.8 279 1-319 37-345 (347)
91 cd08290 ETR 2-enoyl thioester 100.0 4.9E-32 1.1E-36 241.3 25.8 283 1-319 34-341 (341)
92 cd08276 MDR7 Medium chain dehy 100.0 2E-31 4.3E-36 236.7 29.6 301 1-319 32-336 (336)
93 cd05282 ETR_like 2-enoyl thioe 100.0 1.7E-31 3.6E-36 236.0 27.1 278 1-318 31-323 (323)
94 PTZ00354 alcohol dehydrogenase 100.0 2.3E-31 5.1E-36 236.1 27.5 280 1-319 33-328 (334)
95 cd08270 MDR4 Medium chain dehy 100.0 2E-31 4.3E-36 233.7 26.6 265 1-319 31-305 (305)
96 PRK10754 quinone oxidoreductas 100.0 1.9E-31 4.1E-36 236.2 26.4 280 1-318 33-326 (327)
97 cd08250 Mgc45594_like Mgc45594 100.0 4.5E-31 9.7E-36 233.9 26.5 277 1-318 35-329 (329)
98 COG2130 Putative NADP-dependen 100.0 2.8E-31 6.1E-36 218.6 22.6 273 1-319 44-338 (340)
99 cd08243 quinone_oxidoreductase 100.0 5.9E-31 1.3E-35 232.0 26.4 277 1-317 32-319 (320)
100 cd08249 enoyl_reductase_like e 100.0 1.5E-30 3.3E-35 231.4 25.4 285 1-319 31-339 (339)
101 cd08251 polyketide_synthase po 100.0 3.3E-30 7.2E-35 225.4 26.8 279 1-317 12-303 (303)
102 cd08289 MDR_yhfp_like Yhfp put 100.0 2.9E-30 6.2E-35 228.5 26.6 282 1-319 32-326 (326)
103 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 7.1E-30 1.5E-34 225.8 28.2 280 1-319 32-325 (325)
104 TIGR02823 oxido_YhdH putative 100.0 4.6E-30 1E-34 226.9 26.7 279 1-319 31-323 (323)
105 cd08253 zeta_crystallin Zeta-c 100.0 1.3E-29 2.8E-34 223.7 28.1 284 1-319 32-325 (325)
106 cd08255 2-desacetyl-2-hydroxye 100.0 1E-29 2.2E-34 219.9 26.8 247 24-317 16-277 (277)
107 cd05286 QOR2 Quinone oxidoredu 100.0 1.4E-29 3E-34 222.8 27.3 276 1-318 31-319 (320)
108 cd08252 AL_MDR Arginate lyase 100.0 1.2E-29 2.6E-34 225.4 27.0 279 1-318 35-336 (336)
109 cd08247 AST1_like AST1 is a cy 100.0 2.7E-29 6E-34 224.5 27.5 288 1-319 33-352 (352)
110 cd05276 p53_inducible_oxidored 100.0 3.7E-29 8.1E-34 220.4 27.4 277 1-317 32-323 (323)
111 smart00829 PKS_ER Enoylreducta 100.0 2.4E-29 5.2E-34 218.1 25.5 271 1-317 2-288 (288)
112 cd05288 PGDH Prostaglandin deh 100.0 1.9E-29 4.2E-34 223.4 25.3 273 1-317 37-329 (329)
113 cd08248 RTN4I1 Human Reticulon 100.0 4.5E-29 9.8E-34 223.0 26.0 279 1-318 34-350 (350)
114 cd08272 MDR6 Medium chain dehy 100.0 9.1E-29 2E-33 218.5 26.5 279 1-319 32-326 (326)
115 cd08273 MDR8 Medium chain dehy 100.0 7E-29 1.5E-33 220.0 25.7 272 1-317 32-330 (331)
116 TIGR02824 quinone_pig3 putativ 100.0 1.7E-28 3.6E-33 216.6 27.5 279 1-319 32-325 (325)
117 cd05195 enoyl_red enoyl reduct 100.0 1E-28 2.2E-33 214.4 24.9 272 1-317 5-293 (293)
118 cd08288 MDR_yhdh Yhdh putative 100.0 3.6E-28 7.8E-33 214.9 27.4 279 1-319 32-324 (324)
119 cd08268 MDR2 Medium chain dehy 100.0 1.7E-27 3.7E-32 210.4 29.4 283 1-318 32-327 (328)
120 cd08241 QOR1 Quinone oxidoredu 100.0 5.9E-28 1.3E-32 212.8 26.4 278 1-318 32-323 (323)
121 cd08267 MDR1 Medium chain dehy 100.0 3.9E-28 8.6E-33 213.9 24.1 279 1-317 31-319 (319)
122 cd08271 MDR5 Medium chain dehy 100.0 5.4E-28 1.2E-32 213.6 25.0 280 1-319 32-325 (325)
123 cd08275 MDR3 Medium chain dehy 100.0 2.7E-27 5.9E-32 210.2 27.7 277 1-319 31-337 (337)
124 cd05289 MDR_like_2 alcohol deh 100.0 9.4E-28 2E-32 210.3 23.4 273 1-317 32-309 (309)
125 KOG1202 Animal-type fatty acid 100.0 1.1E-27 2.3E-32 224.8 14.1 273 3-319 1451-1741(2376)
126 KOG1196 Predicted NAD-dependen 99.9 1.3E-24 2.9E-29 178.7 20.7 249 28-319 67-340 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 1.1E-22 2.3E-27 150.4 5.1 104 1-107 6-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 9.7E-17 2.1E-21 122.5 13.1 128 147-279 1-130 (130)
129 PRK09424 pntA NAD(P) transhydr 99.5 1.9E-12 4E-17 118.6 15.4 155 134-289 162-339 (509)
130 cd00401 AdoHcyase S-adenosyl-L 99.4 4.3E-12 9.3E-17 113.5 16.1 172 125-317 188-374 (413)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 4.1E-13 8.9E-18 102.0 2.8 119 180-317 1-127 (127)
132 TIGR00561 pntA NAD(P) transhyd 98.6 3.9E-07 8.4E-12 83.8 12.3 105 135-241 162-285 (511)
133 PRK11873 arsM arsenite S-adeno 98.6 5.5E-07 1.2E-11 77.6 12.7 172 131-316 72-258 (272)
134 PRK00517 prmA ribosomal protei 98.5 8.8E-06 1.9E-10 69.1 15.5 135 92-242 78-215 (250)
135 PRK05476 S-adenosyl-L-homocyst 98.4 8.8E-06 1.9E-10 73.5 13.4 103 125-244 198-303 (425)
136 PRK08306 dipicolinate synthase 98.3 4.8E-05 1E-09 66.1 16.2 113 136-264 151-263 (296)
137 cd05213 NAD_bind_Glutamyl_tRNA 98.3 6.2E-06 1.4E-10 72.3 10.1 108 102-222 139-251 (311)
138 COG2518 Pcm Protein-L-isoaspar 98.2 1.8E-05 3.8E-10 63.9 10.3 105 126-241 62-170 (209)
139 TIGR01035 hemA glutamyl-tRNA r 98.2 1.3E-07 2.9E-12 86.1 -2.1 159 31-221 89-252 (417)
140 PF11017 DUF2855: Protein of u 98.1 0.00024 5.3E-09 61.2 16.3 237 38-310 39-311 (314)
141 TIGR00936 ahcY adenosylhomocys 98.1 6.6E-05 1.4E-09 67.5 13.4 102 125-243 181-285 (406)
142 PLN02494 adenosylhomocysteinas 98.0 0.00013 2.9E-09 66.3 12.7 101 126-243 241-344 (477)
143 PRK00045 hemA glutamyl-tRNA re 97.8 6.2E-05 1.3E-09 68.9 8.2 160 30-221 90-254 (423)
144 TIGR00518 alaDH alanine dehydr 97.8 0.00019 4E-09 64.5 11.1 96 136-241 166-268 (370)
145 TIGR02853 spore_dpaA dipicolin 97.8 0.00083 1.8E-08 58.1 14.3 111 136-262 150-260 (287)
146 PRK12771 putative glutamate sy 97.8 1.7E-05 3.8E-10 75.5 4.3 80 133-220 133-233 (564)
147 PRK08324 short chain dehydroge 97.8 0.00023 4.9E-09 69.4 11.7 140 91-241 385-558 (681)
148 COG2242 CobL Precorrin-6B meth 97.7 0.00072 1.6E-08 53.6 11.1 102 129-239 27-134 (187)
149 PRK00377 cbiT cobalt-precorrin 97.7 0.00091 2E-08 54.7 12.0 102 129-238 33-143 (198)
150 TIGR00406 prmA ribosomal prote 97.7 0.0008 1.7E-08 58.4 12.1 96 134-241 157-260 (288)
151 COG4221 Short-chain alcohol de 97.6 0.0016 3.5E-08 53.8 12.3 81 136-219 5-91 (246)
152 COG2264 PrmA Ribosomal protein 97.6 0.0011 2.4E-08 56.9 11.5 130 101-242 129-265 (300)
153 COG2230 Cfa Cyclopropane fatty 97.6 0.0028 6.1E-08 54.0 13.2 102 129-243 65-179 (283)
154 PTZ00075 Adenosylhomocysteinas 97.5 0.00079 1.7E-08 61.5 10.1 93 134-243 251-344 (476)
155 PRK13943 protein-L-isoaspartat 97.5 0.0018 3.9E-08 56.8 11.7 103 128-239 72-179 (322)
156 PF06325 PrmA: Ribosomal prote 97.5 0.00058 1.3E-08 59.0 8.4 127 102-243 129-262 (295)
157 KOG1209 1-Acyl dihydroxyaceton 97.5 0.0026 5.7E-08 51.3 11.3 83 136-220 6-92 (289)
158 PF01488 Shikimate_DH: Shikima 97.5 0.0011 2.3E-08 50.6 9.0 73 136-220 11-86 (135)
159 PF01135 PCMT: Protein-L-isoas 97.5 0.00073 1.6E-08 55.5 8.5 105 126-239 62-171 (209)
160 PRK13942 protein-L-isoaspartat 97.5 0.0043 9.3E-08 51.3 13.0 103 128-239 68-175 (212)
161 PRK05786 fabG 3-ketoacyl-(acyl 97.4 0.0063 1.4E-07 51.0 13.2 105 136-242 4-137 (238)
162 TIGR02469 CbiT precorrin-6Y C5 97.3 0.0083 1.8E-07 44.6 12.0 102 130-239 13-121 (124)
163 PRK14967 putative methyltransf 97.3 0.0068 1.5E-07 50.5 12.6 100 129-240 29-159 (223)
164 PRK05993 short chain dehydroge 97.3 0.0027 5.9E-08 54.7 10.4 82 136-219 3-86 (277)
165 TIGR00080 pimt protein-L-isoas 97.3 0.0064 1.4E-07 50.4 12.0 103 128-239 69-176 (215)
166 PF12847 Methyltransf_18: Meth 97.2 0.0011 2.3E-08 48.6 5.9 93 136-238 1-109 (112)
167 PRK13944 protein-L-isoaspartat 97.2 0.013 2.9E-07 48.1 12.7 103 128-239 64-172 (205)
168 COG0300 DltE Short-chain dehyd 97.1 0.0043 9.2E-08 52.6 9.7 85 135-220 4-95 (265)
169 PRK06182 short chain dehydroge 97.1 0.0086 1.9E-07 51.4 11.7 81 136-219 2-84 (273)
170 PF02826 2-Hacid_dh_C: D-isome 97.1 0.0071 1.5E-07 48.5 10.4 108 135-282 34-146 (178)
171 COG1748 LYS9 Saccharopine dehy 97.0 0.0079 1.7E-07 53.8 10.8 97 138-241 2-100 (389)
172 PF02353 CMAS: Mycolic acid cy 97.0 0.004 8.6E-08 53.5 8.5 99 129-239 55-165 (273)
173 KOG1205 Predicted dehydrogenas 96.9 0.022 4.8E-07 48.7 12.2 107 136-244 11-153 (282)
174 PRK11705 cyclopropane fatty ac 96.9 0.011 2.3E-07 53.5 11.0 99 130-240 161-267 (383)
175 TIGR00438 rrmJ cell division p 96.9 0.018 3.9E-07 46.6 11.1 101 132-240 28-146 (188)
176 PRK00107 gidB 16S rRNA methylt 96.9 0.018 3.9E-07 46.5 10.6 98 133-240 42-145 (187)
177 PRK12742 oxidoreductase; Provi 96.8 0.035 7.5E-07 46.4 12.6 100 136-241 5-132 (237)
178 PRK08017 oxidoreductase; Provi 96.8 0.012 2.5E-07 50.0 9.8 80 138-219 3-84 (256)
179 COG3967 DltE Short-chain dehyd 96.8 0.012 2.7E-07 47.3 8.8 82 136-220 4-89 (245)
180 PRK08261 fabG 3-ketoacyl-(acyl 96.8 0.034 7.4E-07 51.6 13.4 81 136-219 209-294 (450)
181 PRK07402 precorrin-6B methylas 96.8 0.056 1.2E-06 44.0 13.1 104 129-240 33-142 (196)
182 PRK12828 short chain dehydroge 96.7 0.043 9.2E-07 45.8 12.7 81 136-219 6-92 (239)
183 PRK00811 spermidine synthase; 96.7 0.013 2.8E-07 50.7 9.3 98 135-239 75-190 (283)
184 PRK05693 short chain dehydroge 96.7 0.015 3.3E-07 49.9 9.8 79 138-219 2-82 (274)
185 PRK04457 spermidine synthase; 96.7 0.029 6.2E-07 48.0 11.2 97 135-238 65-175 (262)
186 PRK08265 short chain dehydroge 96.6 0.057 1.2E-06 46.0 12.8 104 136-241 5-137 (261)
187 COG3288 PntA NAD/NADP transhyd 96.6 0.017 3.6E-07 49.3 9.0 131 135-266 162-310 (356)
188 COG0031 CysK Cysteine synthase 96.6 0.11 2.3E-06 44.9 13.7 60 128-187 53-114 (300)
189 COG2519 GCD14 tRNA(1-methylade 96.6 0.033 7.1E-07 46.5 10.2 107 126-241 84-196 (256)
190 PRK12939 short chain dehydroge 96.6 0.059 1.3E-06 45.4 12.4 82 136-219 6-94 (250)
191 PRK06057 short chain dehydroge 96.6 0.025 5.3E-07 48.0 10.1 81 136-219 6-89 (255)
192 PRK07326 short chain dehydroge 96.6 0.065 1.4E-06 44.7 12.5 82 136-219 5-92 (237)
193 PRK08415 enoyl-(acyl carrier p 96.5 0.064 1.4E-06 46.2 12.6 104 136-241 4-144 (274)
194 PF13460 NAD_binding_10: NADH( 96.5 0.04 8.6E-07 44.1 10.7 91 140-241 1-98 (183)
195 PRK06139 short chain dehydroge 96.5 0.026 5.6E-07 50.1 10.3 82 136-219 6-94 (330)
196 PRK00312 pcm protein-L-isoaspa 96.5 0.079 1.7E-06 43.7 12.4 101 128-239 70-174 (212)
197 COG2226 UbiE Methylase involve 96.5 0.057 1.2E-06 45.1 11.3 107 131-246 46-162 (238)
198 COG0686 Ald Alanine dehydrogen 96.5 0.014 3E-07 50.0 7.6 97 136-241 167-269 (371)
199 PRK06949 short chain dehydroge 96.5 0.031 6.8E-07 47.4 10.2 83 135-219 7-96 (258)
200 PF00670 AdoHcyase_NAD: S-aden 96.5 0.099 2.2E-06 40.8 11.8 104 125-245 9-115 (162)
201 PRK08267 short chain dehydroge 96.5 0.064 1.4E-06 45.6 12.0 81 138-219 2-87 (260)
202 PRK04148 hypothetical protein; 96.5 0.1 2.2E-06 39.4 11.4 94 134-239 14-108 (134)
203 PLN03209 translocon at the inn 96.5 0.054 1.2E-06 51.1 12.1 46 130-176 73-119 (576)
204 PRK07806 short chain dehydroge 96.4 0.1 2.2E-06 43.9 13.1 104 136-241 5-135 (248)
205 PRK07109 short chain dehydroge 96.4 0.078 1.7E-06 47.1 12.7 82 136-219 7-95 (334)
206 PRK08339 short chain dehydroge 96.4 0.083 1.8E-06 45.1 12.4 81 136-219 7-95 (263)
207 TIGR01470 cysG_Nterm siroheme 96.3 0.12 2.6E-06 42.4 12.4 93 136-241 8-101 (205)
208 TIGR03840 TMPT_Se_Te thiopurin 96.3 0.072 1.6E-06 44.0 11.1 105 134-241 32-153 (213)
209 PRK00536 speE spermidine synth 96.3 0.026 5.6E-07 48.0 8.6 101 134-240 70-171 (262)
210 COG0169 AroE Shikimate 5-dehyd 96.3 0.017 3.8E-07 49.6 7.6 45 135-179 124-168 (283)
211 PLN02366 spermidine synthase 96.3 0.046 9.9E-07 47.8 10.3 102 134-239 89-205 (308)
212 PRK07231 fabG 3-ketoacyl-(acyl 96.3 0.11 2.4E-06 43.7 12.7 82 136-219 4-91 (251)
213 TIGR00417 speE spermidine synt 96.3 0.046 9.9E-07 47.0 10.2 102 134-240 70-186 (270)
214 PLN02823 spermine synthase 96.3 0.065 1.4E-06 47.4 11.2 99 135-238 102-218 (336)
215 TIGR02356 adenyl_thiF thiazole 96.3 0.085 1.8E-06 43.2 11.3 35 136-170 20-54 (202)
216 PRK07814 short chain dehydroge 96.3 0.047 1E-06 46.6 10.1 82 136-219 9-97 (263)
217 PRK07060 short chain dehydroge 96.2 0.047 1E-06 45.9 9.9 78 136-219 8-87 (245)
218 COG0421 SpeE Spermidine syntha 96.2 0.066 1.4E-06 46.1 10.7 97 138-239 78-189 (282)
219 cd01065 NAD_bind_Shikimate_DH 96.2 0.066 1.4E-06 41.6 10.0 104 128-242 9-118 (155)
220 PRK01581 speE spermidine synth 96.2 0.074 1.6E-06 47.2 11.1 102 134-240 148-268 (374)
221 PRK12823 benD 1,6-dihydroxycyc 96.2 0.12 2.6E-06 43.9 12.4 82 136-219 7-94 (260)
222 PRK07825 short chain dehydroge 96.2 0.055 1.2E-06 46.4 10.4 81 137-219 5-88 (273)
223 PRK13940 glutamyl-tRNA reducta 96.2 0.073 1.6E-06 48.6 11.4 74 136-221 180-254 (414)
224 PRK06505 enoyl-(acyl carrier p 96.2 0.049 1.1E-06 46.8 9.9 82 136-219 6-95 (271)
225 PF03435 Saccharop_dh: Sacchar 96.2 0.037 8E-07 50.3 9.6 93 140-239 1-97 (386)
226 PF01262 AlaDh_PNT_C: Alanine 96.2 0.02 4.2E-07 45.5 6.8 100 136-240 19-139 (168)
227 PRK05866 short chain dehydroge 96.2 0.06 1.3E-06 46.8 10.5 81 137-219 40-127 (293)
228 PRK07502 cyclohexadienyl dehyd 96.2 0.056 1.2E-06 47.4 10.2 91 138-241 7-101 (307)
229 PRK07533 enoyl-(acyl carrier p 96.2 0.054 1.2E-06 46.1 9.9 104 136-241 9-149 (258)
230 PRK08177 short chain dehydroge 96.2 0.044 9.6E-07 45.5 9.2 78 138-219 2-81 (225)
231 PRK03369 murD UDP-N-acetylmura 96.2 0.045 9.7E-07 51.3 10.1 74 133-220 8-81 (488)
232 PRK06484 short chain dehydroge 96.1 0.14 3.1E-06 48.4 13.7 104 136-241 268-401 (520)
233 PRK06200 2,3-dihydroxy-2,3-dih 96.1 0.062 1.3E-06 45.8 10.3 82 136-219 5-90 (263)
234 PRK07574 formate dehydrogenase 96.1 0.13 2.8E-06 46.5 12.5 92 136-243 191-287 (385)
235 PRK11207 tellurite resistance 96.1 0.056 1.2E-06 44.1 9.4 97 131-239 25-133 (197)
236 PRK08217 fabG 3-ketoacyl-(acyl 96.1 0.074 1.6E-06 44.8 10.6 82 136-219 4-92 (253)
237 PF08704 GCD14: tRNA methyltra 96.1 0.032 6.9E-07 47.0 8.0 110 127-241 31-147 (247)
238 PRK08618 ornithine cyclodeamin 96.1 0.15 3.3E-06 45.1 12.8 101 128-243 118-224 (325)
239 PRK05872 short chain dehydroge 96.1 0.065 1.4E-06 46.7 10.3 81 136-219 8-95 (296)
240 PRK08594 enoyl-(acyl carrier p 96.1 0.13 2.7E-06 43.9 11.7 104 136-241 6-148 (257)
241 PRK06463 fabG 3-ketoacyl-(acyl 96.1 0.061 1.3E-06 45.6 9.8 81 136-219 6-89 (255)
242 TIGR03325 BphB_TodD cis-2,3-di 96.1 0.061 1.3E-06 45.8 9.8 81 136-218 4-88 (262)
243 PRK08317 hypothetical protein; 96.0 0.099 2.1E-06 43.7 10.9 104 129-240 12-124 (241)
244 PRK07677 short chain dehydroge 96.0 0.062 1.3E-06 45.5 9.7 81 137-219 1-88 (252)
245 PLN02244 tocopherol O-methyltr 96.0 0.15 3.2E-06 45.5 12.3 97 135-240 117-223 (340)
246 PRK06719 precorrin-2 dehydroge 96.0 0.16 3.4E-06 39.8 11.1 88 136-239 12-99 (157)
247 TIGR01832 kduD 2-deoxy-D-gluco 96.0 0.092 2E-06 44.2 10.7 82 136-219 4-90 (248)
248 PRK08287 cobalt-precorrin-6Y C 96.0 0.16 3.5E-06 40.9 11.6 99 130-239 25-130 (187)
249 PRK07832 short chain dehydroge 96.0 0.21 4.6E-06 42.8 13.0 78 139-219 2-88 (272)
250 PRK07831 short chain dehydroge 96.0 0.075 1.6E-06 45.2 10.2 84 134-219 14-107 (262)
251 PRK09186 flagellin modificatio 96.0 0.23 4.9E-06 42.0 13.1 81 136-218 3-92 (256)
252 PF13241 NAD_binding_7: Putati 96.0 0.078 1.7E-06 38.2 8.7 89 136-243 6-94 (103)
253 cd05311 NAD_bind_2_malic_enz N 96.0 0.19 4E-06 42.0 12.0 99 128-240 15-128 (226)
254 PRK06128 oxidoreductase; Provi 96.0 0.19 4.1E-06 43.9 12.7 104 136-241 54-192 (300)
255 PRK08862 short chain dehydroge 96.0 0.079 1.7E-06 44.2 9.9 82 136-218 4-92 (227)
256 PRK06180 short chain dehydroge 96.0 0.081 1.8E-06 45.5 10.2 82 136-219 3-88 (277)
257 TIGR01809 Shik-DH-AROM shikima 96.0 0.039 8.5E-07 47.7 8.1 76 136-220 124-201 (282)
258 PRK06718 precorrin-2 dehydroge 96.0 0.23 4.9E-06 40.7 12.2 91 136-241 9-101 (202)
259 KOG1201 Hydroxysteroid 17-beta 96.0 0.053 1.2E-06 46.3 8.6 81 136-219 37-124 (300)
260 PLN03139 formate dehydrogenase 96.0 0.13 2.8E-06 46.5 11.6 92 136-243 198-294 (386)
261 PRK05867 short chain dehydroge 96.0 0.076 1.7E-06 44.9 9.9 82 136-219 8-96 (253)
262 PRK06841 short chain dehydroge 95.9 0.086 1.9E-06 44.6 10.0 82 136-219 14-99 (255)
263 PLN02233 ubiquinone biosynthes 95.9 0.14 3.1E-06 43.7 11.3 104 131-243 68-185 (261)
264 COG2227 UbiG 2-polyprenyl-3-me 95.9 0.081 1.7E-06 43.8 9.1 95 135-239 58-160 (243)
265 PRK12829 short chain dehydroge 95.9 0.067 1.4E-06 45.5 9.2 85 134-220 8-97 (264)
266 PRK06398 aldose dehydrogenase; 95.9 0.15 3.2E-06 43.4 11.3 76 136-219 5-82 (258)
267 PF02254 TrkA_N: TrkA-N domain 95.9 0.38 8.3E-06 35.2 12.2 92 140-239 1-95 (116)
268 PRK13255 thiopurine S-methyltr 95.8 0.069 1.5E-06 44.3 8.8 105 132-239 33-154 (218)
269 PRK12429 3-hydroxybutyrate deh 95.8 0.22 4.7E-06 42.1 12.2 82 136-219 3-91 (258)
270 TIGR00138 gidB 16S rRNA methyl 95.8 0.09 1.9E-06 42.2 9.2 94 136-239 42-141 (181)
271 PRK14103 trans-aconitate 2-met 95.8 0.2 4.4E-06 42.6 11.9 97 129-239 22-125 (255)
272 PRK07062 short chain dehydroge 95.8 0.088 1.9E-06 44.9 9.8 82 136-219 7-97 (265)
273 PRK06603 enoyl-(acyl carrier p 95.8 0.093 2E-06 44.7 9.8 82 136-219 7-96 (260)
274 TIGR03215 ac_ald_DH_ac acetald 95.8 0.14 3.1E-06 44.1 10.8 88 139-238 3-93 (285)
275 PRK08628 short chain dehydroge 95.8 0.074 1.6E-06 45.1 9.2 82 136-219 6-93 (258)
276 PRK08690 enoyl-(acyl carrier p 95.8 0.1 2.2E-06 44.6 9.9 82 136-219 5-94 (261)
277 PRK06500 short chain dehydroge 95.8 0.11 2.4E-06 43.7 10.2 82 136-219 5-90 (249)
278 COG4122 Predicted O-methyltran 95.8 0.19 4.2E-06 41.4 10.9 104 132-240 55-166 (219)
279 PTZ00098 phosphoethanolamine N 95.8 0.21 4.5E-06 42.8 11.7 105 128-241 44-157 (263)
280 PLN03075 nicotianamine synthas 95.7 0.14 3E-06 44.3 10.4 99 135-240 122-233 (296)
281 PF00106 adh_short: short chai 95.7 0.059 1.3E-06 42.3 7.8 81 138-220 1-91 (167)
282 PRK01683 trans-aconitate 2-met 95.7 0.29 6.3E-06 41.7 12.5 99 129-239 24-129 (258)
283 PRK08703 short chain dehydroge 95.7 0.092 2E-06 44.0 9.4 83 136-219 5-97 (239)
284 PRK06196 oxidoreductase; Provi 95.7 0.093 2E-06 46.2 9.7 82 136-219 25-109 (315)
285 TIGR00477 tehB tellurite resis 95.7 0.078 1.7E-06 43.1 8.5 95 132-239 26-132 (195)
286 KOG0725 Reductases with broad 95.7 0.082 1.8E-06 45.4 9.0 85 135-220 6-100 (270)
287 PRK07774 short chain dehydroge 95.7 0.13 2.7E-06 43.4 10.1 82 136-219 5-93 (250)
288 PRK06079 enoyl-(acyl carrier p 95.7 0.11 2.4E-06 44.0 9.8 104 136-241 6-144 (252)
289 PRK09072 short chain dehydroge 95.7 0.13 2.9E-06 43.7 10.3 81 136-219 4-90 (263)
290 KOG1252 Cystathionine beta-syn 95.6 0.1 2.3E-06 45.2 9.2 57 130-186 96-155 (362)
291 PRK08261 fabG 3-ketoacyl-(acyl 95.6 0.039 8.5E-07 51.2 7.4 92 131-242 28-125 (450)
292 PRK08643 acetoin reductase; Va 95.6 0.13 2.7E-06 43.6 10.0 81 137-219 2-89 (256)
293 PRK08589 short chain dehydroge 95.6 0.12 2.7E-06 44.2 10.0 82 136-219 5-92 (272)
294 PRK08300 acetaldehyde dehydrog 95.6 0.16 3.5E-06 44.0 10.5 92 138-239 5-100 (302)
295 PRK08159 enoyl-(acyl carrier p 95.6 0.13 2.8E-06 44.2 10.1 105 135-241 8-149 (272)
296 PRK12937 short chain dehydroge 95.6 0.37 8E-06 40.4 12.7 104 136-241 4-140 (245)
297 TIGR02752 MenG_heptapren 2-hep 95.6 0.21 4.6E-06 41.6 11.1 103 130-241 39-152 (231)
298 PRK06198 short chain dehydroge 95.6 0.14 3.1E-06 43.4 10.1 83 136-219 5-94 (260)
299 PF01209 Ubie_methyltran: ubiE 95.6 0.052 1.1E-06 45.5 7.2 106 130-244 41-157 (233)
300 PRK07024 short chain dehydroge 95.6 0.13 2.7E-06 43.7 9.7 81 137-219 2-88 (257)
301 PRK04266 fibrillarin; Provisio 95.6 0.36 7.8E-06 40.3 12.1 104 130-239 66-175 (226)
302 cd01075 NAD_bind_Leu_Phe_Val_D 95.6 0.79 1.7E-05 37.4 13.9 81 135-231 26-107 (200)
303 PRK12550 shikimate 5-dehydroge 95.6 0.074 1.6E-06 45.7 8.2 52 128-179 113-164 (272)
304 PRK07478 short chain dehydroge 95.6 0.15 3.3E-06 43.1 10.2 82 136-219 5-93 (254)
305 PRK07453 protochlorophyllide o 95.6 0.14 3.1E-06 45.1 10.3 81 136-218 5-92 (322)
306 PRK07454 short chain dehydroge 95.6 0.19 4E-06 42.2 10.6 83 135-219 4-93 (241)
307 PRK07523 gluconate 5-dehydroge 95.5 0.15 3.3E-06 43.1 10.1 82 136-219 9-97 (255)
308 PRK06483 dihydromonapterin red 95.5 0.15 3.2E-06 42.6 10.0 80 137-219 2-84 (236)
309 PRK06194 hypothetical protein; 95.5 0.16 3.4E-06 43.9 10.3 81 137-219 6-93 (287)
310 PRK11036 putative S-adenosyl-L 95.5 0.1 2.3E-06 44.4 9.0 97 135-240 43-149 (255)
311 KOG3201 Uncharacterized conser 95.5 0.093 2E-06 40.5 7.5 117 123-240 16-140 (201)
312 PRK07984 enoyl-(acyl carrier p 95.5 0.15 3.2E-06 43.6 9.9 81 136-218 5-93 (262)
313 TIGR00446 nop2p NOL1/NOP2/sun 95.5 0.58 1.2E-05 40.1 13.5 101 131-240 66-199 (264)
314 PRK05717 oxidoreductase; Valid 95.5 0.17 3.6E-06 42.9 10.2 82 136-219 9-94 (255)
315 PLN02780 ketoreductase/ oxidor 95.5 0.11 2.4E-06 45.8 9.3 80 136-219 52-142 (320)
316 PRK13243 glyoxylate reductase; 95.5 0.28 6.1E-06 43.5 11.8 90 136-243 149-243 (333)
317 PRK07576 short chain dehydroge 95.5 0.18 3.8E-06 43.1 10.3 82 136-219 8-96 (264)
318 PF02558 ApbA: Ketopantoate re 95.5 0.033 7.2E-07 43.1 5.3 100 140-242 1-103 (151)
319 PRK08642 fabG 3-ketoacyl-(acyl 95.5 0.14 2.9E-06 43.3 9.5 81 137-218 5-90 (253)
320 PRK08340 glucose-1-dehydrogena 95.5 0.17 3.7E-06 42.9 10.2 79 139-219 2-86 (259)
321 COG0373 HemA Glutamyl-tRNA red 95.5 0.12 2.5E-06 46.8 9.2 72 136-220 177-249 (414)
322 TIGR01318 gltD_gamma_fam gluta 95.5 0.1 2.2E-06 48.7 9.3 77 136-220 140-237 (467)
323 PRK06953 short chain dehydroge 95.4 0.13 2.7E-06 42.7 9.1 77 138-219 2-80 (222)
324 PRK06179 short chain dehydroge 95.4 0.064 1.4E-06 45.9 7.4 78 137-219 4-83 (270)
325 CHL00194 ycf39 Ycf39; Provisio 95.4 0.26 5.7E-06 43.3 11.5 94 139-241 2-110 (317)
326 PRK12747 short chain dehydroge 95.4 0.39 8.4E-06 40.5 12.2 105 136-241 3-145 (252)
327 PRK06172 short chain dehydroge 95.4 0.18 3.9E-06 42.6 10.1 82 136-219 6-94 (253)
328 PLN02781 Probable caffeoyl-CoA 95.4 0.24 5.3E-06 41.5 10.6 105 132-239 64-177 (234)
329 PRK05854 short chain dehydroge 95.4 0.19 4.2E-06 44.1 10.5 82 136-219 13-103 (313)
330 PRK07985 oxidoreductase; Provi 95.4 0.44 9.6E-06 41.4 12.6 104 136-241 48-186 (294)
331 TIGR02632 RhaD_aldol-ADH rhamn 95.3 0.18 4E-06 49.3 11.1 114 92-219 378-503 (676)
332 COG2910 Putative NADH-flavin r 95.3 0.11 2.5E-06 41.1 7.7 93 139-242 2-106 (211)
333 PRK00121 trmB tRNA (guanine-N( 95.3 0.16 3.4E-06 41.6 9.1 99 136-240 40-156 (202)
334 PRK07063 short chain dehydroge 95.3 0.18 4E-06 42.8 9.9 82 136-219 6-96 (260)
335 PRK07035 short chain dehydroge 95.3 0.2 4.3E-06 42.3 10.1 82 136-219 7-95 (252)
336 PRK15469 ghrA bifunctional gly 95.3 0.21 4.6E-06 43.9 10.4 90 136-243 135-229 (312)
337 PRK05562 precorrin-2 dehydroge 95.3 0.69 1.5E-05 38.3 12.7 91 136-240 24-116 (223)
338 PRK06935 2-deoxy-D-gluconate 3 95.3 0.19 4.2E-06 42.6 10.1 82 136-219 14-101 (258)
339 PRK06138 short chain dehydroge 95.3 0.2 4.3E-06 42.2 10.0 82 136-219 4-91 (252)
340 PRK12809 putative oxidoreducta 95.3 0.11 2.5E-06 50.4 9.5 77 136-220 309-406 (639)
341 PLN03013 cysteine synthase 95.3 0.45 9.7E-06 43.5 12.6 110 130-240 167-314 (429)
342 PRK06701 short chain dehydroge 95.3 0.58 1.3E-05 40.6 13.1 105 135-241 44-182 (290)
343 PRK03612 spermidine synthase; 95.3 0.21 4.5E-06 47.3 10.9 102 134-240 295-415 (521)
344 PRK12481 2-deoxy-D-gluconate 3 95.3 0.2 4.4E-06 42.4 10.0 82 136-219 7-93 (251)
345 PRK13394 3-hydroxybutyrate deh 95.3 0.23 4.9E-06 42.1 10.4 82 136-219 6-94 (262)
346 PRK07340 ornithine cyclodeamin 95.3 0.16 3.5E-06 44.4 9.6 108 123-243 111-220 (304)
347 PRK12384 sorbitol-6-phosphate 95.3 0.19 4.2E-06 42.6 9.9 81 137-219 2-91 (259)
348 cd05211 NAD_bind_Glu_Leu_Phe_V 95.3 0.78 1.7E-05 38.0 13.0 96 135-240 21-126 (217)
349 PRK08277 D-mannonate oxidoredu 95.3 0.2 4.4E-06 43.0 10.1 81 136-218 9-96 (278)
350 PRK06940 short chain dehydroge 95.3 0.47 1E-05 40.8 12.3 100 137-240 2-125 (275)
351 TIGR00507 aroE shikimate 5-deh 95.2 0.31 6.7E-06 41.9 11.1 114 134-261 114-234 (270)
352 PRK08213 gluconate 5-dehydroge 95.2 0.23 4.9E-06 42.2 10.2 82 136-219 11-99 (259)
353 PRK07890 short chain dehydroge 95.2 0.22 4.7E-06 42.2 10.1 82 136-219 4-92 (258)
354 PRK05875 short chain dehydroge 95.2 0.22 4.8E-06 42.7 10.2 82 136-219 6-96 (276)
355 PRK08085 gluconate 5-dehydroge 95.2 0.23 5.1E-06 41.9 10.2 82 136-219 8-96 (254)
356 COG1052 LdhA Lactate dehydroge 95.2 0.38 8.3E-06 42.4 11.5 90 136-243 145-239 (324)
357 TIGR00563 rsmB ribosomal RNA s 95.2 0.42 9E-06 44.1 12.4 103 130-239 232-367 (426)
358 PRK08226 short chain dehydroge 95.2 0.25 5.3E-06 42.0 10.3 82 136-219 5-92 (263)
359 PRK15116 sulfur acceptor prote 95.2 0.77 1.7E-05 39.3 12.9 35 136-170 29-63 (268)
360 PF00899 ThiF: ThiF family; I 95.2 0.2 4.4E-06 38.0 8.7 33 137-169 2-34 (135)
361 TIGR03206 benzo_BadH 2-hydroxy 95.1 0.25 5.5E-06 41.5 10.2 82 136-219 2-90 (250)
362 PRK12475 thiamine/molybdopteri 95.1 0.34 7.4E-06 43.1 11.2 34 137-170 24-57 (338)
363 PLN02253 xanthoxin dehydrogena 95.1 0.22 4.8E-06 42.8 9.9 82 136-219 17-104 (280)
364 PRK08644 thiamine biosynthesis 95.1 0.36 7.8E-06 39.8 10.6 35 136-170 27-61 (212)
365 PRK11761 cysM cysteine synthas 95.1 1.2 2.5E-05 38.9 14.3 58 129-186 55-114 (296)
366 PRK09291 short chain dehydroge 95.1 0.08 1.7E-06 44.8 7.0 76 137-219 2-83 (257)
367 PRK12746 short chain dehydroge 95.1 0.51 1.1E-05 39.8 12.0 82 137-219 6-100 (254)
368 PRK07688 thiamine/molybdopteri 95.1 0.34 7.3E-06 43.1 11.0 34 137-170 24-57 (339)
369 PRK09242 tropinone reductase; 95.1 0.28 6E-06 41.6 10.3 82 136-219 8-98 (257)
370 PRK08993 2-deoxy-D-gluconate 3 95.1 0.26 5.6E-06 41.7 10.1 82 136-219 9-95 (253)
371 PLN02476 O-methyltransferase 95.1 0.35 7.5E-06 41.6 10.6 105 132-239 114-227 (278)
372 PF01596 Methyltransf_3: O-met 95.0 0.16 3.5E-06 41.6 8.3 106 132-240 41-155 (205)
373 PRK14903 16S rRNA methyltransf 95.0 0.54 1.2E-05 43.3 12.6 102 131-240 232-366 (431)
374 cd01487 E1_ThiF_like E1_ThiF_l 95.0 0.3 6.6E-06 38.9 9.7 33 139-171 1-33 (174)
375 PLN02928 oxidoreductase family 95.0 0.54 1.2E-05 42.0 12.2 101 136-243 158-265 (347)
376 TIGR02355 moeB molybdopterin s 95.0 0.32 7E-06 41.0 10.2 32 138-169 25-56 (240)
377 PRK06197 short chain dehydroge 95.0 0.25 5.4E-06 43.2 10.0 82 136-219 15-105 (306)
378 PRK07067 sorbitol dehydrogenas 95.0 0.31 6.8E-06 41.2 10.4 81 137-219 6-90 (257)
379 PRK05876 short chain dehydroge 95.0 0.28 6E-06 42.3 10.1 82 136-219 5-93 (275)
380 PRK14901 16S rRNA methyltransf 95.0 0.41 8.8E-06 44.2 11.7 104 131-239 247-383 (434)
381 PRK07856 short chain dehydroge 95.0 0.22 4.8E-06 42.1 9.4 78 136-219 5-85 (252)
382 PRK06720 hypothetical protein; 95.0 0.47 1E-05 37.6 10.5 82 136-219 15-103 (169)
383 PRK08220 2,3-dihydroxybenzoate 95.0 0.62 1.3E-05 39.2 12.1 77 136-219 7-86 (252)
384 COG1179 Dinucleotide-utilizing 94.9 0.29 6.3E-06 40.6 9.3 34 136-169 29-62 (263)
385 PRK06114 short chain dehydroge 94.9 0.31 6.7E-06 41.3 10.1 82 136-219 7-96 (254)
386 PRK06181 short chain dehydroge 94.9 0.34 7.5E-06 41.1 10.4 80 138-219 2-88 (263)
387 TIGR01138 cysM cysteine syntha 94.9 1.4 3E-05 38.3 14.1 58 129-186 51-110 (290)
388 cd01483 E1_enzyme_family Super 94.9 0.53 1.2E-05 36.0 10.4 32 139-170 1-32 (143)
389 PRK07904 short chain dehydroge 94.8 0.25 5.5E-06 41.9 9.4 83 134-219 5-97 (253)
390 PRK06914 short chain dehydroge 94.8 0.31 6.6E-06 41.9 10.1 80 137-219 3-91 (280)
391 PRK06482 short chain dehydroge 94.8 0.33 7.1E-06 41.6 10.2 80 138-219 3-86 (276)
392 PRK08328 hypothetical protein; 94.8 0.53 1.2E-05 39.4 11.1 33 137-169 27-59 (231)
393 PRK14175 bifunctional 5,10-met 94.8 0.22 4.8E-06 42.9 8.8 83 129-243 149-233 (286)
394 PRK08251 short chain dehydroge 94.8 0.37 7.9E-06 40.5 10.3 81 137-219 2-91 (248)
395 PRK12549 shikimate 5-dehydroge 94.8 0.1 2.2E-06 45.2 6.9 44 135-178 125-168 (284)
396 TIGR00872 gnd_rel 6-phosphoglu 94.8 0.87 1.9E-05 39.7 12.8 43 139-182 2-44 (298)
397 PRK06997 enoyl-(acyl carrier p 94.8 0.3 6.6E-06 41.6 9.8 82 136-219 5-94 (260)
398 cd00755 YgdL_like Family of ac 94.8 0.65 1.4E-05 38.8 11.3 34 137-170 11-44 (231)
399 PRK05557 fabG 3-ketoacyl-(acyl 94.7 0.94 2E-05 37.8 12.7 82 136-219 4-93 (248)
400 PRK06113 7-alpha-hydroxysteroi 94.7 0.37 8E-06 40.8 10.2 82 136-219 10-98 (255)
401 PF08241 Methyltransf_11: Meth 94.7 0.21 4.5E-06 34.7 7.4 86 142-237 2-94 (95)
402 PRK12769 putative oxidoreducta 94.7 0.18 3.9E-06 49.2 9.1 34 136-170 326-359 (654)
403 PF02670 DXP_reductoisom: 1-de 94.7 0.4 8.6E-06 36.0 8.9 92 140-237 1-118 (129)
404 PF01408 GFO_IDH_MocA: Oxidore 94.7 0.71 1.5E-05 33.9 10.5 85 139-236 2-89 (120)
405 PRK08263 short chain dehydroge 94.7 0.39 8.5E-06 41.2 10.3 81 137-219 3-87 (275)
406 cd00757 ThiF_MoeB_HesA_family 94.7 0.29 6.2E-06 40.9 9.2 33 137-169 21-53 (228)
407 PRK06077 fabG 3-ketoacyl-(acyl 94.7 1.1 2.4E-05 37.6 12.9 104 137-241 6-141 (252)
408 PRK12743 oxidoreductase; Provi 94.7 0.36 7.7E-06 40.9 9.9 81 137-219 2-90 (256)
409 TIGR01532 E4PD_g-proteo D-eryt 94.7 0.4 8.7E-06 42.3 10.2 102 139-242 1-122 (325)
410 PRK12938 acetyacetyl-CoA reduc 94.7 0.33 7.1E-06 40.8 9.6 82 136-219 2-91 (246)
411 PRK08063 enoyl-(acyl carrier p 94.7 0.34 7.4E-06 40.7 9.7 83 136-219 3-92 (250)
412 PRK06101 short chain dehydroge 94.6 0.34 7.3E-06 40.7 9.6 41 138-179 2-43 (240)
413 PRK06125 short chain dehydroge 94.6 0.39 8.5E-06 40.7 10.1 79 136-219 6-91 (259)
414 PRK14192 bifunctional 5,10-met 94.6 0.21 4.5E-06 43.2 8.2 82 129-242 150-233 (283)
415 PF03446 NAD_binding_2: NAD bi 94.6 0.66 1.4E-05 36.5 10.6 89 139-243 3-97 (163)
416 PRK14027 quinate/shikimate deh 94.6 0.19 4.2E-06 43.4 8.1 44 135-178 125-168 (283)
417 PRK05597 molybdopterin biosynt 94.6 0.47 1E-05 42.5 10.8 34 137-170 28-61 (355)
418 TIGR02354 thiF_fam2 thiamine b 94.6 0.73 1.6E-05 37.6 11.0 34 137-170 21-54 (200)
419 PRK07074 short chain dehydroge 94.6 0.43 9.4E-06 40.3 10.2 81 137-219 2-87 (257)
420 PRK08416 7-alpha-hydroxysteroi 94.5 0.39 8.5E-06 40.8 9.9 81 136-218 7-96 (260)
421 cd01080 NAD_bind_m-THF_DH_Cycl 94.5 0.3 6.5E-06 38.6 8.4 78 134-243 41-119 (168)
422 PRK06523 short chain dehydroge 94.5 0.28 6.1E-06 41.6 9.0 76 136-218 8-86 (260)
423 PRK12480 D-lactate dehydrogena 94.5 0.93 2E-05 40.2 12.3 88 136-243 145-237 (330)
424 PF10727 Rossmann-like: Rossma 94.5 0.11 2.5E-06 38.9 5.6 79 138-233 11-91 (127)
425 PRK08264 short chain dehydroge 94.5 0.32 7E-06 40.6 9.1 77 136-219 5-83 (238)
426 PRK06124 gluconate 5-dehydroge 94.5 0.54 1.2E-05 39.7 10.5 82 136-219 10-98 (256)
427 PRK08945 putative oxoacyl-(acy 94.5 0.51 1.1E-05 39.6 10.4 85 133-219 8-102 (247)
428 PRK12936 3-ketoacyl-(acyl-carr 94.5 0.51 1.1E-05 39.4 10.3 82 136-219 5-90 (245)
429 PRK10258 biotin biosynthesis p 94.4 0.86 1.9E-05 38.6 11.6 96 132-240 38-140 (251)
430 PRK10669 putative cation:proto 94.4 0.6 1.3E-05 44.7 11.7 93 138-238 418-513 (558)
431 PRK00258 aroE shikimate 5-dehy 94.4 0.14 3.1E-06 44.1 6.9 115 135-261 121-241 (278)
432 PRK10538 malonic semialdehyde 94.4 0.48 1E-05 39.9 10.0 79 139-219 2-84 (248)
433 PLN02336 phosphoethanolamine N 94.4 0.28 6E-06 45.9 9.2 101 131-240 261-369 (475)
434 PRK05690 molybdopterin biosynt 94.4 0.61 1.3E-05 39.4 10.5 33 137-169 32-64 (245)
435 COG0569 TrkA K+ transport syst 94.4 0.42 9.2E-06 39.8 9.4 74 139-220 2-77 (225)
436 PRK13656 trans-2-enoyl-CoA red 94.4 0.5 1.1E-05 42.5 10.2 83 135-220 39-142 (398)
437 PRK05884 short chain dehydroge 94.4 0.36 7.8E-06 40.1 9.0 75 139-218 2-78 (223)
438 PRK06484 short chain dehydroge 94.3 0.34 7.3E-06 45.9 9.9 82 136-219 4-89 (520)
439 PRK03562 glutathione-regulated 94.3 0.36 7.8E-06 46.7 10.1 93 137-237 400-495 (621)
440 PRK12367 short chain dehydroge 94.3 0.35 7.5E-06 40.9 8.9 34 137-171 14-48 (245)
441 PRK12335 tellurite resistance 94.3 0.17 3.7E-06 43.9 7.1 91 136-239 120-222 (287)
442 PRK07069 short chain dehydroge 94.3 0.78 1.7E-05 38.5 11.2 78 139-219 1-89 (251)
443 PRK07097 gluconate 5-dehydroge 94.3 0.55 1.2E-05 40.0 10.3 82 136-219 9-97 (265)
444 PRK09730 putative NAD(P)-bindi 94.3 0.45 9.8E-06 39.8 9.6 81 138-219 2-89 (247)
445 PRK12749 quinate/shikimate deh 94.2 0.23 5E-06 43.1 7.8 36 136-171 123-158 (288)
446 PF05724 TPMT: Thiopurine S-me 94.2 0.14 2.9E-06 42.5 6.1 101 132-239 33-154 (218)
447 KOG4022 Dihydropteridine reduc 94.2 0.72 1.6E-05 35.8 9.4 95 138-241 4-130 (236)
448 PRK06436 glycerate dehydrogena 94.2 0.61 1.3E-05 40.7 10.4 87 136-243 121-212 (303)
449 PRK07666 fabG 3-ketoacyl-(acyl 94.2 0.57 1.2E-05 39.1 10.1 82 136-219 6-94 (239)
450 PRK11188 rrmJ 23S rRNA methylt 94.2 0.96 2.1E-05 37.2 11.1 97 134-239 49-164 (209)
451 PRK07775 short chain dehydroge 94.2 0.57 1.2E-05 40.2 10.2 81 137-219 10-97 (274)
452 PRK12826 3-ketoacyl-(acyl-carr 94.2 0.54 1.2E-05 39.4 10.0 82 136-219 5-93 (251)
453 PRK08303 short chain dehydroge 94.2 0.58 1.3E-05 41.0 10.4 34 136-170 7-41 (305)
454 PRK00216 ubiE ubiquinone/menaq 94.2 1.4 3E-05 36.7 12.4 104 130-241 45-159 (239)
455 PRK05653 fabG 3-ketoacyl-(acyl 94.2 0.61 1.3E-05 38.9 10.2 82 136-219 4-92 (246)
456 PF08003 Methyltransf_9: Prote 94.2 0.8 1.7E-05 39.6 10.6 91 136-238 115-217 (315)
457 PRK07370 enoyl-(acyl carrier p 94.1 0.47 1E-05 40.4 9.4 104 136-241 5-148 (258)
458 TIGR01963 PHB_DH 3-hydroxybuty 94.1 0.56 1.2E-05 39.5 9.9 80 138-219 2-88 (255)
459 PRK06522 2-dehydropantoate 2-r 94.1 0.53 1.1E-05 41.0 10.0 96 139-240 2-100 (304)
460 PRK14904 16S rRNA methyltransf 94.1 1.2 2.5E-05 41.4 12.6 102 129-240 243-377 (445)
461 PF01564 Spermine_synth: Sperm 94.1 0.076 1.6E-06 44.9 4.4 101 135-240 75-191 (246)
462 cd05191 NAD_bind_amino_acid_DH 94.1 0.57 1.2E-05 32.4 8.1 35 135-169 21-55 (86)
463 PRK10901 16S rRNA methyltransf 94.1 1.2 2.6E-05 41.1 12.5 103 129-239 237-371 (427)
464 PRK07791 short chain dehydroge 94.1 0.57 1.2E-05 40.5 10.0 83 135-219 4-102 (286)
465 PLN00203 glutamyl-tRNA reducta 94.0 0.39 8.4E-06 45.2 9.3 74 137-220 266-340 (519)
466 PRK07424 bifunctional sterol d 94.0 0.47 1E-05 43.3 9.6 38 136-174 177-215 (406)
467 PRK07889 enoyl-(acyl carrier p 94.0 0.62 1.3E-05 39.5 10.0 82 136-219 6-95 (256)
468 PRK09134 short chain dehydroge 94.0 0.65 1.4E-05 39.3 10.1 83 136-219 8-97 (258)
469 PRK07417 arogenate dehydrogena 94.0 0.6 1.3E-05 40.3 9.9 87 139-240 2-91 (279)
470 PLN02730 enoyl-[acyl-carrier-p 94.0 1.7 3.6E-05 38.1 12.7 30 136-166 8-40 (303)
471 PF01113 DapB_N: Dihydrodipico 93.9 0.81 1.8E-05 34.1 9.3 94 139-243 2-100 (124)
472 PRK14968 putative methyltransf 93.9 0.39 8.5E-06 38.5 8.2 43 134-179 21-63 (188)
473 PRK05650 short chain dehydroge 93.9 0.62 1.4E-05 39.8 9.9 79 139-219 2-87 (270)
474 PRK08762 molybdopterin biosynt 93.9 0.84 1.8E-05 41.3 11.0 35 136-170 134-168 (376)
475 PRK14902 16S rRNA methyltransf 93.9 1.5 3.3E-05 40.6 12.9 101 131-239 245-378 (444)
476 PRK07577 short chain dehydroge 93.9 0.36 7.9E-06 40.1 8.2 74 137-219 3-78 (234)
477 TIGR00537 hemK_rel_arch HemK-r 93.9 0.83 1.8E-05 36.4 9.9 44 133-179 16-59 (179)
478 PRK13256 thiopurine S-methyltr 93.8 0.74 1.6E-05 38.3 9.6 104 131-241 38-164 (226)
479 PRK06932 glycerate dehydrogena 93.8 0.35 7.6E-06 42.5 8.2 86 136-243 146-236 (314)
480 PLN02490 MPBQ/MSBQ methyltrans 93.8 0.5 1.1E-05 41.9 9.1 104 129-240 105-215 (340)
481 COG0623 FabI Enoyl-[acyl-carri 93.8 2.1 4.5E-05 35.5 11.7 104 135-240 4-144 (259)
482 PRK03659 glutathione-regulated 93.8 0.55 1.2E-05 45.3 10.1 93 138-238 401-496 (601)
483 PRK06141 ornithine cyclodeamin 93.8 2.7 5.8E-05 37.0 13.7 101 129-242 117-221 (314)
484 cd01492 Aos1_SUMO Ubiquitin ac 93.7 0.97 2.1E-05 36.8 10.1 34 137-170 21-54 (197)
485 TIGR00091 tRNA (guanine-N(7)-) 93.7 0.63 1.4E-05 37.8 9.0 99 136-240 16-132 (194)
486 KOG0069 Glyoxylate/hydroxypyru 93.7 0.7 1.5E-05 40.6 9.6 91 135-242 160-255 (336)
487 cd01078 NAD_bind_H4MPT_DH NADP 93.7 1.3 2.9E-05 35.8 10.9 41 136-177 27-68 (194)
488 PLN02657 3,8-divinyl protochlo 93.6 0.65 1.4E-05 42.3 9.9 41 132-173 55-96 (390)
489 PRK08936 glucose-1-dehydrogena 93.6 0.77 1.7E-05 39.0 9.9 82 136-219 6-95 (261)
490 PF13847 Methyltransf_31: Meth 93.6 0.57 1.2E-05 36.2 8.3 98 135-241 2-111 (152)
491 PLN02556 cysteine synthase/L-3 93.6 2.5 5.5E-05 38.1 13.4 110 130-240 103-250 (368)
492 cd01562 Thr-dehyd Threonine de 93.6 2.4 5.3E-05 37.0 13.2 49 137-185 65-115 (304)
493 PTZ00146 fibrillarin; Provisio 93.6 1.2 2.6E-05 38.5 10.8 105 128-238 124-235 (293)
494 TIGR02992 ectoine_eutC ectoine 93.6 1.8 3.9E-05 38.3 12.3 95 134-242 126-226 (326)
495 PRK05855 short chain dehydroge 93.6 0.61 1.3E-05 44.6 10.2 82 136-219 314-402 (582)
496 PRK05134 bifunctional 3-demeth 93.6 0.57 1.2E-05 39.1 8.8 98 132-240 44-151 (233)
497 TIGR01289 LPOR light-dependent 93.6 0.89 1.9E-05 39.9 10.4 81 137-219 3-91 (314)
498 PLN02589 caffeoyl-CoA O-methyl 93.5 1.6 3.4E-05 37.0 11.2 104 132-238 75-188 (247)
499 KOG1200 Mitochondrial/plastidi 93.5 0.83 1.8E-05 36.7 8.8 81 138-220 15-101 (256)
500 PRK07819 3-hydroxybutyryl-CoA 93.5 1.2 2.5E-05 38.7 10.8 38 138-176 6-43 (286)
No 1
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.4e-60 Score=390.54 Aligned_cols=314 Identities=49% Similarity=0.897 Sum_probs=286.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|+++++|||+||+|++.+++.+.+..+.|.++|||.+|+|.++|++|+++++||||+..|..+|+.|..|++|+|++|++
T Consensus 34 v~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~ 113 (354)
T KOG0024|consen 34 VAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPH 113 (354)
T ss_pred EEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCc
Confidence 57899999999999999988888888999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 160 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g 160 (319)
+.|...++.+|++++|+..+++.++++|+++|+|++|++.|++++|||.+++++++|.+|||+|+|++|+.++..||.+|
T Consensus 114 m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLsV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~G 193 (354)
T KOG0024|consen 114 MVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLSVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMG 193 (354)
T ss_pred cccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchhhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhh-hcC-CCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 161 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-AMG-SGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 161 ~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~-~~~-~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
+++|++++..++|+++++++|++.+....... . ...+.++.+ ..+ ..+|+.|||.|..-.++.++..++.+|+++.
T Consensus 194 A~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~-~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vl 271 (354)
T KOG0024|consen 194 ASDVVITDLVANRLELAKKFGATVTDPSSHKS-S-PQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVL 271 (354)
T ss_pred CCcEEEeecCHHHHHHHHHhCCeEEeeccccc-c-HHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEE
Confidence 99999999999999999999999887643322 1 222222222 222 4599999999998889999999999999999
Q ss_pred ecccCCcccccchHHHhcCcEEEEeeccCC-CHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCC-CceEEE
Q 020928 239 IGLAKTEMTVALTPAAAREVDVIGIFRYRS-TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVM 316 (319)
Q Consensus 239 ~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvv 316 (319)
.++.....+++......+++++.|++.+.. .+..+++++.+|+++++++++++|++ +++.+||+.+..++ ..-|++
T Consensus 272 vg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~~k~lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~ 349 (354)
T KOG0024|consen 272 VGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKIDVKPLITHRYKF--DDADEAFETLQHGEEGVIKVI 349 (354)
T ss_pred eccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcCchhheeccccc--chHHHHHHHHHhCcCCceEEE
Confidence 999888889999999999999999999955 99999999999999999999999999 99999999988774 355887
Q ss_pred Ee
Q 020928 317 FN 318 (319)
Q Consensus 317 i~ 318 (319)
+.
T Consensus 350 i~ 351 (354)
T KOG0024|consen 350 IT 351 (354)
T ss_pred Ee
Confidence 74
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.2e-56 Score=383.07 Aligned_cols=300 Identities=31% Similarity=0.494 Sum_probs=266.8
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEE-ccCccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVAL-EPGISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~ 79 (319)
|||+|||+|++|+|..+|.-.. ..+|+|+|||.+|+|+++|++|++|++||||.. ....+|++|.||.+|..++|+
T Consensus 33 I~v~~~GVChsDlH~~~G~~~~---~~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~ 109 (339)
T COG1064 33 IKVEACGVCHTDLHVAKGDWPV---PKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCP 109 (339)
T ss_pred EEEEEEeecchhhhhhcCCCCC---CCCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCC
Confidence 6899999999999999985422 348999999999999999999999999999987 788899999999999999999
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 158 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~ 158 (319)
...+.+. +.+|+|+||+++++.+++++|+++++++||.+. ...|+|++|++.+++||++|+|.|.|++|++++|+|+.
T Consensus 110 ~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka 188 (339)
T COG1064 110 NQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKA 188 (339)
T ss_pred Cccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhhcCCCCCCEEEEECCcHHHHHHHHHHHH
Confidence 8666655 489999999999999999999999999999886 56789999999999999999999999999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
+|+ +|++++++++++++++++|++++++.. ++++.+.+++ .+|+++|+++ +..+...++.|+++|+++.
T Consensus 189 ~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~-------~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~ 257 (339)
T COG1064 189 MGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKE-------IADAIIDTVG-PATLEPSLKALRRGGTLVL 257 (339)
T ss_pred cCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhHh-------hCcEEEECCC-hhhHHHHHHHHhcCCEEEE
Confidence 997 899999999999999999999998743 4454444332 2999999999 7799999999999999999
Q ss_pred ecccC-Cc-ccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEE
Q 020928 239 IGLAK-TE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 315 (319)
Q Consensus 239 ~g~~~-~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 315 (319)
+|... .+ ..++...++.+++++.|+... ..++++++++..+|++ +|.+.+.+++ +++++|++.|++++..|+.
T Consensus 258 vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~I--kp~i~e~~~l--~~in~A~~~m~~g~v~gR~ 333 (339)
T COG1064 258 VGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKI--KPEILETIPL--DEINEAYERMEKGKVRGRA 333 (339)
T ss_pred ECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCc--eeeEEeeECH--HHHHHHHHHHHcCCeeeEE
Confidence 99874 33 346677788999999999987 7789999999999999 5555467888 9999999999999999999
Q ss_pred EEeC
Q 020928 316 MFNL 319 (319)
Q Consensus 316 vi~~ 319 (319)
|+++
T Consensus 334 Vi~~ 337 (339)
T COG1064 334 VIDM 337 (339)
T ss_pred EecC
Confidence 9863
No 3
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-51 Score=365.57 Aligned_cols=308 Identities=30% Similarity=0.564 Sum_probs=266.0
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|||++|++++++...+.+..++|.++|||++|+|+++ ++++|++||||+..+..+|++|.+|..|.+++|+.
T Consensus 32 Vkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~ 109 (343)
T PRK09880 32 VQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTT 109 (343)
T ss_pred EEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCC
Confidence 6899999999999988643333333467999999999999999 78899999999999999999999999999999998
Q ss_pred cccccCC----CCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHH
Q 020928 81 MRFFGSP----PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAA 156 (319)
Q Consensus 81 ~~~~~~~----~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la 156 (319)
..+++.. ..+|+|+||++++++.++++|+++++++++...++++||+++++....++++|+|+|+|++|++++|+|
T Consensus 110 ~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqla 189 (343)
T PRK09880 110 MRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAV 189 (343)
T ss_pred cceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 7765531 247999999999999999999999998888778889999999887777899999999999999999999
Q ss_pred HHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEE
Q 020928 157 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV 236 (319)
Q Consensus 157 ~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~ 236 (319)
+.+|+++|++++++++++++++++|++.++++.. +++.+ +... .+++|++||++|++..+..++++++++|++
T Consensus 190 k~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~----~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~i 262 (343)
T PRK09880 190 KTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH----YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVM 262 (343)
T ss_pred HHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH----Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEE
Confidence 9999977889999999999999999999887643 23322 2221 236999999999877889999999999999
Q ss_pred EEecccCCcccccchHHHhcCcEEEEeeccCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEE
Q 020928 237 CLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 316 (319)
Q Consensus 237 v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 316 (319)
+.+|......+++...+..+++++.++..+.+.++++++++++|++++.+.++++|++ +++++|++.+.++...||++
T Consensus 263 v~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvv 340 (343)
T PRK09880 263 VQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPLLSAEYPF--TDLEEALIFAGDKTQAAKVQ 340 (343)
T ss_pred EEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchhheEEEEEH--HHHHHHHHHHhcCCCceEEE
Confidence 9999765445566667788999999988777789999999999999887888899999 99999999999888889999
Q ss_pred EeC
Q 020928 317 FNL 319 (319)
Q Consensus 317 i~~ 319 (319)
+.+
T Consensus 341 l~~ 343 (343)
T PRK09880 341 LVF 343 (343)
T ss_pred EeC
Confidence 874
No 4
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=7.3e-50 Score=334.05 Aligned_cols=308 Identities=28% Similarity=0.462 Sum_probs=263.0
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++|+|++|...++|.+ +..+|.++|||++|+|+++|++|+++++||.|+...+.+|++|..|++|++++|..
T Consensus 32 Vri~AtGVCHTD~~~~~G~~----p~~~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~ 107 (366)
T COG1062 32 VRITATGVCHTDAHTLSGDD----PEGFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEA 107 (366)
T ss_pred EEEEEeeccccchhhhcCCC----CCCCceecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccc
Confidence 68999999999999999865 44589999999999999999999999999999999888999999999999999985
Q ss_pred cccccC--C----------------C--CCCcceeEEeecCCceEeCCCCCChhhhhccch-hHHHHHHH-HhcCCCCCC
Q 020928 81 MRFFGS--P----------------P--TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEP-LSVGVHAC-RRANVGPET 138 (319)
Q Consensus 81 ~~~~~~--~----------------~--~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~-~~~a~~~l-~~~~~~~~~ 138 (319)
...... . . ..++|+||..+++..+++++++.+++.++++.+ ..|.+-+. +.+++++|+
T Consensus 108 ~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~ 187 (366)
T COG1062 108 IRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGD 187 (366)
T ss_pred hhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCC
Confidence 332110 0 0 134899999999999999999999999999974 45667665 669999999
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
+|.|+|.|++|+++||-|+..|+.+|++++..++|++++++||++++++-... .+..+.++.++ ++++|++|||+|
T Consensus 188 tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~-~~vv~~i~~~T---~gG~d~~~e~~G 263 (366)
T COG1062 188 TVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEV-DDVVEAIVELT---DGGADYAFECVG 263 (366)
T ss_pred eEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhh-hhHHHHHHHhc---CCCCCEEEEccC
Confidence 99999999999999999999999999999999999999999999999873221 15666666664 569999999999
Q ss_pred ChHHHHHHHHhhcCCCEEEEecccCCcccccchHHH-hcCcEEEEeecc----CCCHHHHHHHHHcCCCCCCCceeeeec
Q 020928 219 FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFG 293 (319)
Q Consensus 219 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~ 293 (319)
+.+.+++++.+..++|+.+.+|........+++++. ..+..++|+... ..++..+++++.+|++.+.++++++++
T Consensus 264 ~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~ 343 (366)
T COG1062 264 NVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIP 343 (366)
T ss_pred CHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhcccc
Confidence 999999999999999999999987655555454432 234778887765 668999999999999999999999999
Q ss_pred CChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 294 FTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 294 ~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
+ +|+++||+.|.+++.. |.|+++
T Consensus 344 L--e~INeaf~~m~~G~~I-R~Vi~~ 366 (366)
T COG1062 344 L--EDINEAFDLMHEGKSI-RSVIRF 366 (366)
T ss_pred H--HHHHHHHHHHhCCcee-eEEecC
Confidence 9 9999999999999664 666653
No 5
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.7e-48 Score=345.36 Aligned_cols=309 Identities=35% Similarity=0.623 Sum_probs=256.3
Q ss_pred CCcceEeeccCCccccccccccccccCCCc-ccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPM-VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~-i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 79 (319)
|||.++|||+||++.+++... ..+.|. ++|||++|+|+++| .++.|++||||+..+..+|++|++|+.|.+++|+
T Consensus 30 Vkv~~~gICGSDlh~~~g~~~---~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~ 105 (350)
T COG1063 30 IRVTATGICGSDLHIYRGGEP---FVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCE 105 (350)
T ss_pred EEEEEEeEchhhhhhccCCCC---CCCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCC
Confidence 689999999999999998541 123344 99999999999999 7788999999999999999999999999999999
Q ss_pred CcccccCC----CCCCcceeEEeecCCceEe-CCCCCChhhhhccchhHHHHHHH-HhcCCCCCCeEEEECCCHHHHHHH
Q 020928 80 EMRFFGSP----PTNGSLAHKVVHPAKLCYK-LPDNVSLEEGAMCEPLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTL 153 (319)
Q Consensus 80 ~~~~~~~~----~~~g~~~e~~~~~~~~~~~-iP~~~~~~~aa~~~~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai 153 (319)
+..+++.. ..+|+|+||+.+|.+.+++ +|+++++++|++..++++++++. .....+++.+|+|+|+|++|++++
T Consensus 106 ~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~ 185 (350)
T COG1063 106 NPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAI 185 (350)
T ss_pred CccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHH
Confidence 76555432 2679999999999766555 47777888888889999997774 445555666999999999999999
Q ss_pred HHHHHcCCCeEEEecCChhHHHHHHH-cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcC
Q 020928 154 LAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP 232 (319)
Q Consensus 154 ~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~ 232 (319)
++|+.+|+.+|++++.+++|++++++ .+++.+++. .. ++....+.+++ .+.++|++|||+|.+..+..+++.+++
T Consensus 186 ~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~-~~-~~~~~~~~~~t--~g~g~D~vie~~G~~~~~~~ai~~~r~ 261 (350)
T COG1063 186 ALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP-SE-DDAGAEILELT--GGRGADVVIEAVGSPPALDQALEALRP 261 (350)
T ss_pred HHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC-cc-ccHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhcC
Confidence 99999999999999999999999999 555555442 22 13333333333 456899999999998889999999999
Q ss_pred CCEEEEecccCCcc-cccchHHHhcCcEEEEeec-c-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcC
Q 020928 233 GGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFR-Y-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 309 (319)
Q Consensus 233 ~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 309 (319)
+|+++.+|...... .++...+..+++++.|++. . ...++.+++++.+|++++.+++++++++ +++++|++.+.+.
T Consensus 262 gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~--~~~~~a~~~~~~~ 339 (350)
T COG1063 262 GGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLPL--DDAAEAYELFADR 339 (350)
T ss_pred CCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeeccH--HHHHHHHHHHHhc
Confidence 99999999876655 5667788899999999965 3 5679999999999999999888888888 9999999999886
Q ss_pred CC-ceEEEEeC
Q 020928 310 GN-AIKVMFNL 319 (319)
Q Consensus 310 ~~-~gkvvi~~ 319 (319)
.. ..|+++++
T Consensus 340 ~~~~~Kv~i~~ 350 (350)
T COG1063 340 KEEAIKVVLKP 350 (350)
T ss_pred CCCeEEEEecC
Confidence 44 66998863
No 6
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-48 Score=322.30 Aligned_cols=304 Identities=24% Similarity=0.402 Sum_probs=257.4
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEE-EccCccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVA-LEPGISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~-~~~~~~~~~~~~~~~~~~~~~~ 79 (319)
|||+|||||++|++..+|.- + ..++|.++|||.+|+|+++|++|++|++||||- .....+|..|.||.+|..++|+
T Consensus 41 vkI~~cGIChsDlH~~~gdw-g--~s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCp 117 (360)
T KOG0023|consen 41 VKIEYCGVCHSDLHAWKGDW-G--LSKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCP 117 (360)
T ss_pred EEEEEEeccchhHHHhhccC-C--cccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCC
Confidence 68999999999999998743 2 268999999999999999999999999999995 4556799999999999999999
Q ss_pred --Cccccc----CCCCCCcceeEEeecCCceEeCCCCCChhhhhccch-hHHHHHHHHhcCCCCCCeEEEECCCHHHHHH
Q 020928 80 --EMRFFG----SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEP-LSVGVHACRRANVGPETNVMIMGSGPIGLVT 152 (319)
Q Consensus 80 --~~~~~~----~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~-~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~a 152 (319)
+..+.+ +..+.|+||+|+++++..+++||+++++++||.+.+ ..|.|.+|.+.++.||+++.|.|+|++|.++
T Consensus 118 k~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~a 197 (360)
T KOG0023|consen 118 KMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMA 197 (360)
T ss_pred ceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehhHHcCCCCCcEEEEecCcccchHH
Confidence 433332 233466799999999999999999999999998875 4567889999999999999999987799999
Q ss_pred HHHHHHcCCCeEEEecCCh-hHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhc
Q 020928 153 LLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231 (319)
Q Consensus 153 i~la~~~g~~~vv~v~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~ 231 (319)
+|+||++|. +|++++++. +|++.++.||++..++. ..++++ ++.+.++.+.++|-|.+. ....+..++.+|+
T Consensus 198 Vq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~-~~d~d~---~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk 270 (360)
T KOG0023|consen 198 VQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDS-TEDPDI---MKAIMKTTDGGIDTVSNL--AEHALEPLLGLLK 270 (360)
T ss_pred HHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEe-cCCHHH---HHHHHHhhcCcceeeeec--cccchHHHHHHhh
Confidence 999999999 788888887 78888888999988764 334454 444444445666666655 3447888999999
Q ss_pred CCCEEEEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCC
Q 020928 232 PGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 310 (319)
Q Consensus 232 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 310 (319)
.+|+++++|.+.....+++.++.++.+.|.|+... .++.++++++..++.+ ++.+ +..++ +++++|++.|++++
T Consensus 271 ~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgd 345 (360)
T KOG0023|consen 271 VNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLI--KSPI-ELVKL--SEVNEAYERMEKGD 345 (360)
T ss_pred cCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcC
Confidence 99999999998888888999999999999999876 7789999999999999 4444 55678 99999999999999
Q ss_pred CceEEEEeC
Q 020928 311 NAIKVMFNL 319 (319)
Q Consensus 311 ~~gkvvi~~ 319 (319)
...|.|+.+
T Consensus 346 V~yRfVvD~ 354 (360)
T KOG0023|consen 346 VRYRFVVDV 354 (360)
T ss_pred eeEEEEEEc
Confidence 999998864
No 7
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.9e-47 Score=340.02 Aligned_cols=308 Identities=31% Similarity=0.546 Sum_probs=261.4
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|++.+.+.... +..+|.++|||++|+|+++|++|++|++||||+..+..+|++|+.|+.|++++|..
T Consensus 29 V~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~ 106 (339)
T cd08239 29 LRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTS 106 (339)
T ss_pred EEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcC
Confidence 6899999999999988764322 22358999999999999999999999999999999889999999999999999987
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHc
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAF 159 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~ 159 (319)
..+..+....|+|+||+.++...++++|+++++++|++++ ++.+||++++..+++++++|||+|+|++|++++|+|+.+
T Consensus 107 ~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~ 186 (339)
T cd08239 107 KRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGLGALMLARAL 186 (339)
T ss_pred cccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHc
Confidence 6541122457999999999999999999999999999875 788999999888899999999999999999999999999
Q ss_pred CCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEe
Q 020928 160 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 160 g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
|++.|+++++++++.++++++|++.++++.. ++ .+.+.++. .+.++|++||++|++......+++++++|+++.+
T Consensus 187 G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 261 (339)
T cd08239 187 GAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT--SGAGADVAIECSGNTAARRLALEAVRPWGRLVLV 261 (339)
T ss_pred CCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEE
Confidence 9965888999999999999999998887533 23 33444433 3458999999999886678889999999999999
Q ss_pred cccCCcccccc-hHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEE
Q 020928 240 GLAKTEMTVAL-TPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 317 (319)
Q Consensus 240 g~~~~~~~~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 317 (319)
|..... .+.. ..+..+++++.+++.. .++++++++++.+|++++.+.++++|++ +++++|++.++++. .||+|+
T Consensus 262 g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--~~~~~a~~~~~~~~-~gKvvi 337 (339)
T cd08239 262 GEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVTHRFGL--DQAPEAYALFAQGE-SGKVVF 337 (339)
T ss_pred cCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEEEEecH--HHHHHHHHHHHcCC-ceEEEE
Confidence 864432 2332 3467789999998876 4679999999999999888888999999 99999999998875 799999
Q ss_pred eC
Q 020928 318 NL 319 (319)
Q Consensus 318 ~~ 319 (319)
++
T Consensus 338 ~~ 339 (339)
T cd08239 338 VF 339 (339)
T ss_pred eC
Confidence 75
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=7.3e-47 Score=339.86 Aligned_cols=306 Identities=31% Similarity=0.490 Sum_probs=260.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|||++|+++++|.. +..+|.++|||++|+|+++|+++++|++||||++.+..+|+.|..|..|.+++|..
T Consensus 38 V~v~~~gi~~~D~~~~~g~~----~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~ 113 (371)
T cd08281 38 VKIAAAGLCHSDLSVINGDR----PRPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEP 113 (371)
T ss_pred EEEEEEeeCccchHhhcCCC----CCCCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccC
Confidence 68999999999999998753 33579999999999999999999999999999987777899999999999999987
Q ss_pred cccccC--------------------CCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCC
Q 020928 81 MRFFGS--------------------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPET 138 (319)
Q Consensus 81 ~~~~~~--------------------~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~ 138 (319)
....+. ....|+|+||+.+++..++++|+++++++|+.++ ...+||+++ +.+++++++
T Consensus 114 ~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~ 193 (371)
T cd08281 114 GAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQ 193 (371)
T ss_pred ccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCC
Confidence 532110 0013799999999999999999999999999885 678899987 558899999
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
+|||.|+|++|++++|+|+..|++.|++++++++++++++++|++.++++. .+++.+.+.++. +.++|++|||+|
T Consensus 194 ~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~--~~~~~~~i~~~~---~~g~d~vid~~G 268 (371)
T cd08281 194 SVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAG--DPNAVEQVRELT---GGGVDYAFEMAG 268 (371)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCC--chhHHHHHHHHh---CCCCCEEEECCC
Confidence 999999999999999999999996688999999999999999999887753 345555665553 338999999999
Q ss_pred ChHHHHHHHHhhcCCCEEEEecccCC--cccccchHHHhcCcEEEEeecc----CCCHHHHHHHHHcCCCCCCCceeeee
Q 020928 219 FDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRF 292 (319)
Q Consensus 219 ~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (319)
++..+..++++++++|+++.+|.... ...++...+..+++++.+++.. .+++.++++++.+|++++.++++++|
T Consensus 269 ~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~ 348 (371)
T cd08281 269 SVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRL 348 (371)
T ss_pred ChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeee
Confidence 87788999999999999999996532 2345556678899999998754 45688899999999998888889999
Q ss_pred cCChhhHHHHHHHHhcCCCceEEEE
Q 020928 293 GFTQKEIEDAFEISAQGGNAIKVMF 317 (319)
Q Consensus 293 ~~~~~~~~~a~~~~~~~~~~gkvvi 317 (319)
++ +++++|++.+.+++..+|+|+
T Consensus 349 ~l--~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 349 PL--DEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred cH--HHHHHHHHHHhCCCceeeeeC
Confidence 99 999999999999988888764
No 9
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.6e-46 Score=337.18 Aligned_cols=311 Identities=26% Similarity=0.432 Sum_probs=258.1
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++|||++|++.+.|... ....+|.++|||++|+|+++|+++++|++||||++.+..+|+.|.+|..|.+++|+.
T Consensus 40 V~v~~~gic~sD~~~~~g~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~ 117 (381)
T PLN02740 40 IKILYTSICHTDLSAWKGENE--AQRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCET 117 (381)
T ss_pred EEEEEEecChhhHHHhCCCCc--ccCCCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccC
Confidence 689999999999999987531 123579999999999999999999999999999999999999999999999999987
Q ss_pred cccccC-----------------------CCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCC
Q 020928 81 MRFFGS-----------------------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVG 135 (319)
Q Consensus 81 ~~~~~~-----------------------~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~ 135 (319)
....+. ....|+|+||+.++.+.++++|+++++++++.+. .+.+||+++ +.++++
T Consensus 118 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~ 197 (381)
T PLN02740 118 YRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQ 197 (381)
T ss_pred ccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCC
Confidence 543211 0126999999999999999999999999998875 678899886 558999
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
++++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++.++++...++++.+.+.++. ++++|++||
T Consensus 198 ~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid 274 (381)
T PLN02740 198 AGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMT---GGGVDYSFE 274 (381)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHh---CCCCCEEEE
Confidence 99999999999999999999999999668899999999999999999988875433334555565554 238999999
Q ss_pred ccCChHHHHHHHHhhcCC-CEEEEecccCCcccccchHH-HhcCcEEEEeecc----CCCHHHHHHHHHcCCCCCCCcee
Q 020928 216 CVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA-AAREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLIT 289 (319)
Q Consensus 216 ~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~ 289 (319)
++|++..+...+.+++++ |+++.+|.......+..... .++++++.|+... ...+.++++++.+|++++.+.++
T Consensus 275 ~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it 354 (381)
T PLN02740 275 CAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFIT 354 (381)
T ss_pred CCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHhee
Confidence 999877889999999996 99999997543322333222 3468888887653 24578899999999998878889
Q ss_pred eeecCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 290 HRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 290 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
++|++ +|+++|++.+.+++. .|++|++
T Consensus 355 ~~~~l--~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 355 HELPF--EKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred EEecH--HHHHHHHHHHHCCCc-eeEEEeC
Confidence 99999 999999999988855 5999874
No 10
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=8.3e-46 Score=333.07 Aligned_cols=307 Identities=25% Similarity=0.421 Sum_probs=255.7
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|||++|++.+.+. ..+|.++|||++|+|+++|+++++|++||||++.+..+|+.|.+|.+|.+++|+.
T Consensus 42 Vkv~~~gic~sD~~~~~g~------~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~ 115 (378)
T PLN02827 42 IKVVSTSLCRSDLSAWESQ------ALFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQV 115 (378)
T ss_pred EEEEEEecChhHHHHhcCC------CCCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccC
Confidence 6899999999999988763 1468999999999999999999999999999998888999999999999999987
Q ss_pred cccc----------------cCC----CCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCC
Q 020928 81 MRFF----------------GSP----PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPET 138 (319)
Q Consensus 81 ~~~~----------------~~~----~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~ 138 (319)
.... +.. ...|+|+||+.+++..++++|+++++++++.+. .+.++|+++ +.+++++++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~ 195 (378)
T PLN02827 116 LGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGS 195 (378)
T ss_pred ccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCC
Confidence 5321 000 024899999999999999999999999988775 567788766 458899999
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
+|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++....+++.+.+.++. ++++|++||++|
T Consensus 196 ~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G 272 (378)
T PLN02827 196 SVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMT---GGGADYSFECVG 272 (378)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHh---CCCCCEEEECCC
Confidence 99999999999999999999999778888889999999999999988875432235555555544 338999999999
Q ss_pred ChHHHHHHHHhhcCC-CEEEEecccCCcccccc-hHHHhcCcEEEEeecc----CCCHHHHHHHHHcCCCCCCCceeeee
Q 020928 219 FDKTMSTALNATRPG-GKVCLIGLAKTEMTVAL-TPAAAREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRF 292 (319)
Q Consensus 219 ~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (319)
.+..+...++.++++ |+++.+|.......+.. ..++.+++++.|+... ..++.++++++++|++++.+.++++|
T Consensus 273 ~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~ 352 (378)
T PLN02827 273 DTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNL 352 (378)
T ss_pred ChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEe
Confidence 876788999999998 99999997543333322 3467789999987653 34688899999999997766888999
Q ss_pred cCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 293 GFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 293 ~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
++ +++++|++.+.+++. .|+||.+
T Consensus 353 ~l--e~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 353 SF--DEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred cH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence 99 999999999998865 6999864
No 11
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-45 Score=328.85 Aligned_cols=307 Identities=28% Similarity=0.499 Sum_probs=258.7
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|++.+.+.. ...+|.++|||++|+|+++|+++++|++||||++.+..+|+.|.+|..|.+++|..
T Consensus 30 V~v~~~gi~~~D~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~ 105 (347)
T PRK10309 30 VKVASSGLCGSDIPRIFKNG----AHYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAK 105 (347)
T ss_pred EEEEEEEEchhcHHHHhCCC----CCCCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCC
Confidence 68999999999997543211 11358899999999999999999999999999999999999999999999999987
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 160 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g 160 (319)
..+++. ...|+|+||+.++++.++++|+++++++|++++++++++++++..+++++++|+|+|+|++|++++|+|+.+|
T Consensus 106 ~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G 184 (347)
T PRK10309 106 YDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALG 184 (347)
T ss_pred cceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 665543 3589999999999999999999999999998877777888887788999999999999999999999999999
Q ss_pred CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCcc-EEEEccCChHHHHHHHHhhcCCCEEEEe
Q 020928 161 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID-VSFDCVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 161 ~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d-~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
++.|++++++++++++++++|++.++++.. .+ ...+.++. .+.++| ++|||+|++..+..++++++++|+++.+
T Consensus 185 ~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~~~~--~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~ 259 (347)
T PRK10309 185 AKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQSVL--RELRFDQLILETAGVPQTVELAIEIAGPRAQLALV 259 (347)
T ss_pred CCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHHHHh--cCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEE
Confidence 976888889999999999999998877543 22 23344333 245788 9999999877889999999999999999
Q ss_pred cccCCccccc---chHHHhcCcEEEEeecc------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCC
Q 020928 240 GLAKTEMTVA---LTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 310 (319)
Q Consensus 240 g~~~~~~~~~---~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 310 (319)
|......+++ ...+..+++++.+++.. .++++++++++++|.+.+.+.++++|++ +++++|++.+.++.
T Consensus 260 G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~ 337 (347)
T PRK10309 260 GTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSF--ESFAQAVRDLAGNP 337 (347)
T ss_pred ccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeH--HHHHHHHHHHhcCC
Confidence 9654332222 23467789999987653 2568899999999999888889999999 99999999999998
Q ss_pred CceEEEEeC
Q 020928 311 NAIKVMFNL 319 (319)
Q Consensus 311 ~~gkvvi~~ 319 (319)
..||+++++
T Consensus 338 ~~gKvvv~~ 346 (347)
T PRK10309 338 MPGKVLLQI 346 (347)
T ss_pred cceEEEEeC
Confidence 889999874
No 12
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.2e-45 Score=331.40 Aligned_cols=309 Identities=27% Similarity=0.432 Sum_probs=252.7
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|||++|++..+|... ...+|.++|||++|+|+++|+++++|++||||++.+..+|+.|.+|..|.+++|++
T Consensus 31 I~v~a~gi~~sD~~~~~g~~~---~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~ 107 (368)
T TIGR02818 31 VRIVATGVCHTDAFTLSGADP---EGVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVA 107 (368)
T ss_pred EEEEEecccHHHHHHhcCCCC---CCCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccC
Confidence 689999999999999887531 13579999999999999999999999999999998888999999999999999987
Q ss_pred cccc---cC-----------------CCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCC
Q 020928 81 MRFF---GS-----------------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPET 138 (319)
Q Consensus 81 ~~~~---~~-----------------~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~ 138 (319)
.... +. ....|+|+||+.++.+.++++|+++++++|++++ ++.+||+++ +++++++++
T Consensus 108 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~ 187 (368)
T TIGR02818 108 VRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGD 187 (368)
T ss_pred cccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCC
Confidence 4310 00 0024799999999999999999999999999886 778999998 558999999
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
+|||+|+|++|++++|+|+.+|+++|++++.+++++++++++|++.++++.....++.+.+.+++ ++++|++||++|
T Consensus 188 ~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G 264 (368)
T TIGR02818 188 TVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEIT---DGGVDYSFECIG 264 (368)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHh---CCCCCEEEECCC
Confidence 99999999999999999999999778999999999999999999998875432334445555554 238999999999
Q ss_pred ChHHHHHHHHhhcCC-CEEEEecccCC--cccccchHHHhcCcEEEEeecc----CCCHHHHHHHHHcCCCCCCCceeee
Q 020928 219 FDKTMSTALNATRPG-GKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHR 291 (319)
Q Consensus 219 ~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~ 291 (319)
++..+..++++++++ |+++.+|.... ...+....+. ++..+.++... ..++.++++++.+|++++.++++++
T Consensus 265 ~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~ 343 (368)
T TIGR02818 265 NVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHT 343 (368)
T ss_pred CHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEE
Confidence 877888999999886 99999997532 2222222232 33445665432 3468899999999999888889999
Q ss_pred ecCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 292 FGFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 292 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
|+| +++++|++.+++++ ..|+++++
T Consensus 344 ~~l--~~~~~A~~~~~~~~-~~k~~v~~ 368 (368)
T TIGR02818 344 MPL--EDINEAFDLMHEGK-SIRTVIHY 368 (368)
T ss_pred ecH--HHHHHHHHHHhCCC-ceeEEeeC
Confidence 999 99999999998775 47999875
No 13
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1e-45 Score=333.00 Aligned_cols=308 Identities=22% Similarity=0.405 Sum_probs=243.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++|||++|+++++|.. ...+|.++|||++|+|+++|++|++|++||||++.+..+|++|.+|.+|++++|+.
T Consensus 38 Vkv~a~gIcgsD~~~~~g~~----~~~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~ 113 (393)
T TIGR02819 38 LKVVTTNICGSDQHMVRGRT----TAPTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLN 113 (393)
T ss_pred EEEEEeeecHHHHHHHCCCC----CCCCCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcC
Confidence 68999999999999988642 23579999999999999999999999999999998888999999999999999997
Q ss_pred cc------cccCC---CCCCcceeEEeecCC--ceEeCCCCCCh----hhhhcc-chhHHHHHHHHhcCCCCCCeEEEEC
Q 020928 81 MR------FFGSP---PTNGSLAHKVVHPAK--LCYKLPDNVSL----EEGAMC-EPLSVGVHACRRANVGPETNVMIMG 144 (319)
Q Consensus 81 ~~------~~~~~---~~~g~~~e~~~~~~~--~~~~iP~~~~~----~~aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G 144 (319)
.. +++.. ..+|+|+||+.+++. .++++|++++. ++++.+ .++.++|+++++.+++++++|||.|
T Consensus 114 ~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G 193 (393)
T TIGR02819 114 VNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAG 193 (393)
T ss_pred CCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEEC
Confidence 43 12211 246999999999964 79999998753 233444 5788999999888999999999999
Q ss_pred CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCCh----
Q 020928 145 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---- 220 (319)
Q Consensus 145 ~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~---- 220 (319)
+|++|++++|+|+.+|++.+++++.++++.++++++|++. +++ ....++.+.+.++. .+.++|++||++|.+
T Consensus 194 ~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~-~~~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~ 269 (393)
T TIGR02819 194 AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDL-SKDATLPEQIEQIL--GEPEVDCAVDCVGFEARGH 269 (393)
T ss_pred CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-Eec-CCcccHHHHHHHHc--CCCCCcEEEECCCCccccc
Confidence 9999999999999999976777778889999999999974 433 22234555555543 346799999999985
Q ss_pred ----------HHHHHHHHhhcCCCEEEEecccC-Ccc-c-----------ccchHHHhcCcEEEEeeccC-CCHHHHHHH
Q 020928 221 ----------KTMSTALNATRPGGKVCLIGLAK-TEM-T-----------VALTPAAAREVDVIGIFRYR-STWPLCIEF 276 (319)
Q Consensus 221 ----------~~~~~~~~~l~~~G~~v~~g~~~-~~~-~-----------~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 276 (319)
..++.+++.++++|+++.+|... .+. . +.....+.+++++.+..... +.+.+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 349 (393)
T TIGR02819 270 GHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQA 349 (393)
T ss_pred cccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHhhccCceEEeccCChhhhHHHHHHH
Confidence 37899999999999999999753 111 1 11223345556666543322 334689999
Q ss_pred HHcCCCCCCCcee-eeecCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 277 LRSGKIDVKPLIT-HRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 277 ~~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
+.+|++++.++++ ++|++ +++++|++.+.++. .+|+++++
T Consensus 350 ~~~g~i~~~~~i~~~~~~l--~~~~~a~~~~~~~~-~~Kvvi~~ 390 (393)
T TIGR02819 350 ILHDRVQIAKAVNVTVISL--DDAPEGYAEFDAGA-AKKFVIDP 390 (393)
T ss_pred HHcCCCCHHHceecceecH--HHHHHHHHHHhhCC-ceEEEEeC
Confidence 9999998777666 67999 99999999998874 58999863
No 14
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2.3e-45 Score=328.69 Aligned_cols=307 Identities=25% Similarity=0.431 Sum_probs=257.3
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|+++.+|.. ...+|.++|||++|+|+++|+++++|++||||++.+..+|+.|.+|..|++++|..
T Consensus 31 V~v~~~gi~~~D~~~~~g~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~ 106 (358)
T TIGR03451 31 VDIQACGVCHTDLHYREGGI----NDEFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFD 106 (358)
T ss_pred EEEEEEeecHHHHHHhcCCc----cccCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcC
Confidence 68999999999999988743 23579999999999999999999999999999998889999999999999999975
Q ss_pred cccc--------cC----CCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCCeEEEECCC
Q 020928 81 MRFF--------GS----PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSG 146 (319)
Q Consensus 81 ~~~~--------~~----~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g 146 (319)
.... +. .-..|+|+||+.+++..++++|+++++++|+.+. .+.++|+++ +.++++++++|||+|+|
T Consensus 107 ~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g 186 (358)
T TIGR03451 107 THNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCG 186 (358)
T ss_pred ccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCC
Confidence 3211 10 0135999999999999999999999999998875 567788876 45789999999999999
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHH
Q 020928 147 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 226 (319)
Q Consensus 147 ~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~ 226 (319)
++|++++|+|+..|+++|++++++++++++++++|++.++++. .+++.+.+.++. .+.++|++|||+|++..+..+
T Consensus 187 ~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~--~~~~~~~i~~~~--~~~g~d~vid~~g~~~~~~~~ 262 (358)
T TIGR03451 187 GVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS--GTDPVEAIRALT--GGFGADVVIDAVGRPETYKQA 262 (358)
T ss_pred HHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCC--CcCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHH
Confidence 9999999999999997789999999999999999999888753 345555555543 346799999999987788999
Q ss_pred HHhhcCCCEEEEecccCCc--ccccchHHHhcCcEEEEeecc----CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHH
Q 020928 227 LNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIE 300 (319)
Q Consensus 227 ~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 300 (319)
+++++++|+++.+|..... ..++...+..+++++.+++.. .+.++++++++++|++++.+.++++|++ ++++
T Consensus 263 ~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~ 340 (358)
T TIGR03451 263 FYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGL--DDVE 340 (358)
T ss_pred HHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecH--HHHH
Confidence 9999999999999975432 234445677788998887542 4568889999999999887888899999 9999
Q ss_pred HHHHHHhcCCCceEEEEe
Q 020928 301 DAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 301 ~a~~~~~~~~~~gkvvi~ 318 (319)
+|++.+++++.. |+++.
T Consensus 341 ~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 341 EAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHHhCCCcc-eeEEe
Confidence 999999988665 77775
No 15
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-45 Score=303.05 Aligned_cols=310 Identities=26% Similarity=0.417 Sum_probs=263.8
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++++|++|.....|.+ ....+|.|+|||++|+|+.+|++|+++++||+|+......|++|.+|+++..++|..
T Consensus 37 IKI~~t~vCHTD~~~~~g~~---~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~ 113 (375)
T KOG0022|consen 37 IKILATGVCHTDAYVWSGKD---PEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEK 113 (375)
T ss_pred EEEEEEeeccccceeecCCC---ccccCceEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhh
Confidence 68999999999999999875 234789999999999999999999999999999999999999999999999999977
Q ss_pred cccccC---C------------------CCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCC
Q 020928 81 MRFFGS---P------------------PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPE 137 (319)
Q Consensus 81 ~~~~~~---~------------------~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~ 137 (319)
...... . ....+|+||.+++...+++|++..+++.++++. ...|+|-|. +.+++++|
T Consensus 114 ~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~G 193 (375)
T KOG0022|consen 114 FRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPG 193 (375)
T ss_pred hcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCC
Confidence 554321 0 013489999999999999999999999999997 456777764 77999999
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEcc
Q 020928 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 217 (319)
Q Consensus 138 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~ 217 (319)
+++.|+|-|++|+++++-||+.|+++|+.+|-++++.+.++++|+++.++-........+.+.+++ ++|+|+.|||+
T Consensus 194 stvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmT---dgGvDysfEc~ 270 (375)
T KOG0022|consen 194 STVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMT---DGGVDYSFECI 270 (375)
T ss_pred CEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHh---cCCceEEEEec
Confidence 999999999999999999999999999999999999999999999999875422223445555554 68999999999
Q ss_pred CChHHHHHHHHhhcCC-CEEEEecccCCcccccchHH-HhcCcEEEEeec----cCCCHHHHHHHHHcCCCCCCCceeee
Q 020928 218 GFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA-AAREVDVIGIFR----YRSTWPLCIEFLRSGKIDVKPLITHR 291 (319)
Q Consensus 218 g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~ 291 (319)
|....+++++.+...+ |.-+.+|.......+..+++ .+++..+.|+.- ...++..+++.+.++++++...++++
T Consensus 271 G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~ 350 (375)
T KOG0022|consen 271 GNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHE 350 (375)
T ss_pred CCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcc
Confidence 9999999999999888 99999998766555555553 344566655432 27789999999999999999999999
Q ss_pred ecCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 292 FGFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 292 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
++| +++++||+.|.+++.. |.|+.+
T Consensus 351 l~f--~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 351 LPF--EEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred cCH--HHHHHHHHHHhCCceE-EEEEeC
Confidence 999 9999999999999776 777753
No 16
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=3.9e-45 Score=326.81 Aligned_cols=301 Identities=21% Similarity=0.317 Sum_probs=244.7
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcc-CccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~ 79 (319)
|||.++|||++|++++.|... ...+|.++|||++|+|+++|++|++|++||||+..+ ..+|+.|.+|..|.+++|+
T Consensus 42 V~v~~~gic~sD~~~~~g~~~---~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~ 118 (360)
T PLN02586 42 VKILYCGVCHSDLHTIKNEWG---FTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCP 118 (360)
T ss_pred EEEEEecCChhhHhhhcCCcC---CCCCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCC
Confidence 689999999999999876431 125699999999999999999999999999998544 3579999999999999998
Q ss_pred Cccccc------CCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEECCCHHHHH
Q 020928 80 EMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGSGPIGLV 151 (319)
Q Consensus 80 ~~~~~~------~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ 151 (319)
+..+.. +...+|+|+||+.++++.++++|+++++++|+.+. ...++|+++.+ ..++++++|||.|+|++|++
T Consensus 119 ~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~ 198 (360)
T PLN02586 119 KMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHV 198 (360)
T ss_pred CccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHH
Confidence 764321 12247999999999999999999999999999775 56788988865 56789999999999999999
Q ss_pred HHHHHHHcCCCeEEEecCChh-HHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhh
Q 020928 152 TLLAARAFGAPRIIITDVDVQ-RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 230 (319)
Q Consensus 152 ai~la~~~g~~~vv~v~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l 230 (319)
++|+|+.+|+ .+++++.+++ +.++++++|++.++++.. . +.+.++. + ++|++||++|++..+..+++++
T Consensus 199 avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~--~---~~~~~~~---~-~~D~vid~~g~~~~~~~~~~~l 268 (360)
T PLN02586 199 AVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTD--P---EKMKAAI---G-TMDYIIDTVSAVHALGPLLGLL 268 (360)
T ss_pred HHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCC--H---HHHHhhc---C-CCCEEEECCCCHHHHHHHHHHh
Confidence 9999999999 4665555544 456778899998876432 1 2333332 2 6999999999876788999999
Q ss_pred cCCCEEEEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcC
Q 020928 231 RPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 309 (319)
Q Consensus 231 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 309 (319)
+++|+++.+|.......++...++.++..+.++... ...++++++++.+|++++ .+ ++|++ +|+++|++.+.++
T Consensus 269 ~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~--~~-~~~~l--~~~~~A~~~~~~~ 343 (360)
T PLN02586 269 KVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITA--DI-ELIRM--DEINTAMERLAKS 343 (360)
T ss_pred cCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCC--cE-EEEeH--HHHHHHHHHHHcC
Confidence 999999999965444455666677788888777654 456889999999999953 34 57888 9999999999999
Q ss_pred CCceEEEEeC
Q 020928 310 GNAIKVMFNL 319 (319)
Q Consensus 310 ~~~gkvvi~~ 319 (319)
+..||+|+++
T Consensus 344 ~~~gkvvi~~ 353 (360)
T PLN02586 344 DVRYRFVIDV 353 (360)
T ss_pred CCcEEEEEEc
Confidence 8889999874
No 17
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=7.4e-45 Score=326.82 Aligned_cols=308 Identities=25% Similarity=0.428 Sum_probs=254.3
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|||++|++.++|... ...+|.++|||++|+|+++|+++++|++||||+..+..+|++|.+|..|.+++|..
T Consensus 32 Ikv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~ 108 (369)
T cd08301 32 IKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDL 108 (369)
T ss_pred EEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcC
Confidence 689999999999999887532 23579999999999999999999999999999998889999999999999999987
Q ss_pred cccc---cC------------------CCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCC
Q 020928 81 MRFF---GS------------------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPE 137 (319)
Q Consensus 81 ~~~~---~~------------------~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~ 137 (319)
..+. +. ....|+|+||+.+++..++++|+++++++|++++ .+.++|+++ +..+++++
T Consensus 109 ~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g 188 (369)
T cd08301 109 LRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKG 188 (369)
T ss_pred cccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCC
Confidence 5432 00 0034899999999999999999999999998875 677889876 45889999
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEcc
Q 020928 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 217 (319)
Q Consensus 138 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~ 217 (319)
++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++....+++...++++. ++++|++||++
T Consensus 189 ~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~---~~~~d~vid~~ 265 (369)
T cd08301 189 STVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMT---GGGVDYSFECT 265 (369)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHh---CCCCCEEEECC
Confidence 999999999999999999999998678999999999999999999888875432234445555544 34899999999
Q ss_pred CChHHHHHHHHhhcCC-CEEEEecccCCcccccchH-HHhcCcEEEEeecc----CCCHHHHHHHHHcCCCCCCCceeee
Q 020928 218 GFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-AAAREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHR 291 (319)
Q Consensus 218 g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~ 291 (319)
|+...+...+.+++++ |+++.+|.......+.... ...+++++.+++.. ...++++++++.+|.+++.+.++++
T Consensus 266 G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~ 345 (369)
T cd08301 266 GNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHE 345 (369)
T ss_pred CChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeee
Confidence 9877788899999996 9999999754322222222 23478899887543 3467889999999999887788899
Q ss_pred ecCChhhHHHHHHHHhcCCCceEEEE
Q 020928 292 FGFTQKEIEDAFEISAQGGNAIKVMF 317 (319)
Q Consensus 292 ~~~~~~~~~~a~~~~~~~~~~gkvvi 317 (319)
|++ +++++|++.+++++. .|+++
T Consensus 346 ~~l--~~~~~A~~~~~~~~~-~k~~~ 368 (369)
T cd08301 346 LPF--SEINKAFDLLLKGEC-LRCIL 368 (369)
T ss_pred ecH--HHHHHHHHHHHCCCc-eeEEe
Confidence 999 999999999999876 48886
No 18
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=4.6e-45 Score=327.32 Aligned_cols=301 Identities=20% Similarity=0.314 Sum_probs=246.8
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCc-cCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~ 79 (319)
|||.++|||++|++++.|... ...+|.++|||++|+|+++|+++++|++||||+..+.. +|++|.+|++|.+++|+
T Consensus 36 VkV~a~gic~sD~~~~~G~~~---~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~ 112 (375)
T PLN02178 36 VKILFCGVCHSDLHTIKNHWG---FSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCP 112 (375)
T ss_pred EEEEEEcCchHHHHHhcCCCC---CCCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCC
Confidence 689999999999999886431 12468999999999999999999999999999865544 69999999999999999
Q ss_pred Cccccc------CCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcC--CCCCCeEEEECCCHHHH
Q 020928 80 EMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRAN--VGPETNVMIMGSGPIGL 150 (319)
Q Consensus 80 ~~~~~~------~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~--~~~~~~vlI~G~g~vG~ 150 (319)
+..+.. +...+|+|+||+.++++.++++|+++++++|+.+. ...++|+++.... .+++++|+|.|+|++|+
T Consensus 113 ~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~ 192 (375)
T PLN02178 113 KVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGH 192 (375)
T ss_pred CccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHH
Confidence 865321 11236999999999999999999999999998775 5678888886643 46899999999999999
Q ss_pred HHHHHHHHcCCCeEEEecCCh-hHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHh
Q 020928 151 VTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 229 (319)
Q Consensus 151 ~ai~la~~~g~~~vv~v~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~ 229 (319)
+++|+|+.+|+ ++++++.++ ++.++++++|++.++++.. . ..+.+. .+ ++|++||++|++..+..++++
T Consensus 193 ~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~--~---~~v~~~---~~-~~D~vid~~G~~~~~~~~~~~ 262 (375)
T PLN02178 193 IAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD--S---QKMKEA---VG-TMDFIIDTVSAEHALLPLFSL 262 (375)
T ss_pred HHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC--H---HHHHHh---hC-CCcEEEECCCcHHHHHHHHHh
Confidence 99999999999 566666554 4578889999998876432 1 233332 22 699999999987678899999
Q ss_pred hcCCCEEEEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhc
Q 020928 230 TRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ 308 (319)
Q Consensus 230 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 308 (319)
++++|+++.+|.......++...+..+++++.|+... .+++.++++++++|+++ +.+ ++|+| +++++|++.+.+
T Consensus 263 l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~--~~i-~~~~l--~~~~~A~~~~~~ 337 (375)
T PLN02178 263 LKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIV--SDI-ELIKM--SDINSAMDRLAK 337 (375)
T ss_pred hcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCc--ccE-EEEeH--HHHHHHHHHHHc
Confidence 9999999999975544455666777899999998765 45788999999999995 334 56888 999999999999
Q ss_pred CCCceEEEEeC
Q 020928 309 GGNAIKVMFNL 319 (319)
Q Consensus 309 ~~~~gkvvi~~ 319 (319)
++..||+|+++
T Consensus 338 ~~~~gkvvi~~ 348 (375)
T PLN02178 338 SDVRYRFVIDV 348 (375)
T ss_pred CCCceEEEEEe
Confidence 98889999874
No 19
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.1e-44 Score=325.26 Aligned_cols=308 Identities=28% Similarity=0.449 Sum_probs=251.6
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++|||++|++.+.|... ...+|.++|||++|+|+++|+++++|++||||++.+..+|++|.+|.+|++++|.+
T Consensus 32 Irv~a~gi~~~D~~~~~g~~~---~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~ 108 (368)
T cd08300 32 IKILATGVCHTDAYTLSGADP---EGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQK 108 (368)
T ss_pred EEEEEEEechhhHHHhcCCCc---cCCCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCC
Confidence 689999999999999887532 12579999999999999999999999999999998888999999999999999986
Q ss_pred cccc---cC-----------------CCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCC
Q 020928 81 MRFF---GS-----------------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPET 138 (319)
Q Consensus 81 ~~~~---~~-----------------~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~ 138 (319)
.... +. ....|+|+||+.+++..++++|+++++++|+.++ ++.+||+++ +.+++++++
T Consensus 109 ~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~ 188 (368)
T cd08300 109 IRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGS 188 (368)
T ss_pred ccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCC
Confidence 4311 00 0124799999999999999999999999999886 778999987 558899999
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
+|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++.++++...++++.+.+.+++ ++++|++||++|
T Consensus 189 ~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~g 265 (368)
T cd08300 189 TVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMT---DGGVDYTFECIG 265 (368)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHh---CCCCcEEEECCC
Confidence 99999999999999999999999678999999999999999999998876443234666665554 348999999999
Q ss_pred ChHHHHHHHHhhcCC-CEEEEecccCC--cccccchHHHhcCcEEEEeecc----CCCHHHHHHHHHcCCCCCCCceeee
Q 020928 219 FDKTMSTALNATRPG-GKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHR 291 (319)
Q Consensus 219 ~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~ 291 (319)
++..+..++++++++ |+++.+|.... ........+. +...+.++... ..++.++++++.+|++++.+.++++
T Consensus 266 ~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~ 344 (368)
T cd08300 266 NVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHT 344 (368)
T ss_pred ChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeee
Confidence 877889999999886 99999986532 1222222222 33455554322 4568889999999999877888999
Q ss_pred ecCChhhHHHHHHHHhcCCCceEEEEe
Q 020928 292 FGFTQKEIEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 292 ~~~~~~~~~~a~~~~~~~~~~gkvvi~ 318 (319)
|+| +++++|++.+.+++. .|++++
T Consensus 345 ~~l--e~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 345 MPL--DEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred EcH--HHHHHHHHHHhCCCC-ceeeeC
Confidence 999 999999999988754 699875
No 20
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.2e-44 Score=323.09 Aligned_cols=309 Identities=22% Similarity=0.424 Sum_probs=258.0
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|++...+... ...++|.++|||++|+|+++|+++..+ +||||+..+..+|++|.+|+.|++++|..
T Consensus 28 Vrv~~~gic~sD~~~~~~~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~ 104 (349)
T TIGR03201 28 VKVAGCGVCHTDLSYYYMGVR--TNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRA 104 (349)
T ss_pred EEEEEEeecccchHHHcCCCC--ccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCC
Confidence 689999999999998744321 123568999999999999999999887 99999999999999999999999999987
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCC------CCChhhhhcc-chhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPD------NVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTL 153 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~------~~~~~~aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai 153 (319)
..+.+. ..+|+|+||+.++.+.++++|+ ++++++++.+ .++.++|+++++.+++++++|+|+|+|++|++++
T Consensus 105 ~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~~~~~~g~~VlV~G~G~vG~~a~ 183 (349)
T TIGR03201 105 QKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMV 183 (349)
T ss_pred CCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHH
Confidence 655443 3479999999999999999999 8999888876 4788999999888899999999999999999999
Q ss_pred HHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCC-cchhHHHHHhhhhcCCCcc----EEEEccCChHHHHHHHH
Q 020928 154 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI-EDVDTDVGKIQNAMGSGID----VSFDCVGFDKTMSTALN 228 (319)
Q Consensus 154 ~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~i~~~~~~~~~~~d----~v~d~~g~~~~~~~~~~ 228 (319)
|+|+..|+ .|++++++++++++++++|++.++++.... +++.+.+++++ .+.++| ++|||+|+....+.+++
T Consensus 184 ~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t--~~~g~d~~~d~v~d~~g~~~~~~~~~~ 260 (349)
T TIGR03201 184 QTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA--KARGLRSTGWKIFECSGSKPGQESALS 260 (349)
T ss_pred HHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc--ccCCCCCCcCEEEECCCChHHHHHHHH
Confidence 99999999 688889999999999999998887753321 23444444443 245675 89999998877888999
Q ss_pred hhcCCCEEEEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHh
Q 020928 229 ATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 307 (319)
Q Consensus 229 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~ 307 (319)
+++++|+++.+|.......+....++.++.++.+.+.. ..+++++++++++|++++.+.+ ++|++ +++++|++.+.
T Consensus 261 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~~~~~i-~~~~l--~~~~~A~~~~~ 337 (349)
T TIGR03201 261 LLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQLGPFV-ERRPL--DQIEHVFAAAH 337 (349)
T ss_pred HHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCCcccce-EEecH--HHHHHHHHHHH
Confidence 99999999999976544455555667778888888754 5578999999999999877666 46888 99999999999
Q ss_pred cCCCceEEEEeC
Q 020928 308 QGGNAIKVMFNL 319 (319)
Q Consensus 308 ~~~~~gkvvi~~ 319 (319)
+++..+|++++.
T Consensus 338 ~~~~~~k~~~~~ 349 (349)
T TIGR03201 338 HHKLKRRAILTP 349 (349)
T ss_pred cCCccceEEecC
Confidence 998899999863
No 21
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=6.8e-45 Score=318.27 Aligned_cols=282 Identities=29% Similarity=0.415 Sum_probs=235.2
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++|||+.|+..++|. .....++|+|+|.|++|+|+++|++|++|++||||+... .
T Consensus 32 VrV~a~gvN~~D~~~r~G~--~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~-~------------------ 90 (326)
T COG0604 32 VRVKAAGVNPIDVLVRQGL--APPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALG-G------------------ 90 (326)
T ss_pred EEEEEeecChHHHHhccCC--CCCCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEcc-C------------------
Confidence 6899999999999999986 222356899999999999999999999999999999742 0
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
...+|+|+||+.+|++.++++|+++|+++||+++ .+.|||+++.. .++++|++|||+| +|++|++++||||
T Consensus 91 ------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk 164 (326)
T COG0604 91 ------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAK 164 (326)
T ss_pred ------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHH
Confidence 0047999999999999999999999999999996 78899999965 8899999999997 7999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
.+|+ .++++.+++++.++++++|++++++|.. +++.+.+++++. +.++|+|||++|++ .+..++++|+++|+++
T Consensus 165 ~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~~t~--g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv 238 (326)
T COG0604 165 ALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRELTG--GKGVDVVLDTVGGD-TFAASLAALAPGGRLV 238 (326)
T ss_pred HcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHcC--CCCceEEEECCCHH-HHHHHHHHhccCCEEE
Confidence 9998 4555556677777999999999999754 458888877763 56899999999987 8888999999999999
Q ss_pred EecccC--CcccccchHHHhcCcEEEEeecc-C------CCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhc
Q 020928 238 LIGLAK--TEMTVALTPAAAREVDVIGIFRY-R------STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ 308 (319)
Q Consensus 238 ~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~-~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 308 (319)
.+|... ....++...+..+.+...+.... . +.+.++++++.+|.+ ++.+..+|++ ++..++..+...
T Consensus 239 ~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l--~~~i~~~~~l--~e~~~a~a~~~~ 314 (326)
T COG0604 239 SIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKL--KPVIDRVYPL--AEAPAAAAHLLL 314 (326)
T ss_pred EEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCC--cceeccEech--hhhHHHHHHHHc
Confidence 999654 33345566677788888877665 2 356779999999999 6777788999 886565555444
Q ss_pred -CCCceEEEEeC
Q 020928 309 -GGNAIKVMFNL 319 (319)
Q Consensus 309 -~~~~gkvvi~~ 319 (319)
++..||+|+++
T Consensus 315 ~~~~~GKvvl~~ 326 (326)
T COG0604 315 ERRTTGKVVLKV 326 (326)
T ss_pred ccCCcceEEEeC
Confidence 48999999974
No 22
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=4.9e-44 Score=320.82 Aligned_cols=307 Identities=28% Similarity=0.467 Sum_probs=254.6
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++|+|++|++.+.|.. +..+|.++|||++|+|+++|+++++|++||||++.+..+|++|.+|..|.+++|+.
T Consensus 32 Vkv~~~gi~~sD~~~~~g~~----~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~ 107 (365)
T cd08277 32 IKMLATSVCHTDILAIEGFK----ATLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQK 107 (365)
T ss_pred EEEEEEeechhhHHHhcCCC----CCCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcC
Confidence 68999999999999988753 24578999999999999999999999999999998888999999999999999987
Q ss_pred cccccC-------------------CCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCCe
Q 020928 81 MRFFGS-------------------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETN 139 (319)
Q Consensus 81 ~~~~~~-------------------~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~ 139 (319)
..+... ....|+|+||+.++.+.++++|+++++++|+.++ ++.+||+++ +.++++++++
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~ 187 (365)
T cd08277 108 YRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGST 187 (365)
T ss_pred ccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCE
Confidence 543211 0125899999999999999999999999999886 788999987 5588999999
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCC
Q 020928 140 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 219 (319)
Q Consensus 140 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~ 219 (319)
|+|+|+|++|++++|+|+.+|+++|++++++++++++++++|++.+++......++.+.+.++. +.++|++||++|+
T Consensus 188 vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~---~~g~d~vid~~g~ 264 (365)
T cd08277 188 VAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMT---GGGVDYSFECTGN 264 (365)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHh---CCCCCEEEECCCC
Confidence 9999999999999999999999778899999999999999999888775432233445555443 3579999999998
Q ss_pred hHHHHHHHHhhcCC-CEEEEecccCC-cccccchHHHhcCcEEEEeecc----CCCHHHHHHHHHcCCCCCCCceeeeec
Q 020928 220 DKTMSTALNATRPG-GKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFG 293 (319)
Q Consensus 220 ~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~ 293 (319)
...+...+++++++ |+++.+|.... ..++....+.. ++++.+++.. ...+++++++++++++++.+.++++|+
T Consensus 265 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (365)
T cd08277 265 ADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLP 343 (365)
T ss_pred hHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEc
Confidence 76888999999875 99999986542 22333334443 7888877654 346889999999999988888999999
Q ss_pred CChhhHHHHHHHHhcCCCceEEEEe
Q 020928 294 FTQKEIEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 294 ~~~~~~~~a~~~~~~~~~~gkvvi~ 318 (319)
+ +|+++|++.+++++ ..|++++
T Consensus 344 l--~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 344 F--EEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred h--hhHHHHHHHHHCCC-CceEeeC
Confidence 9 99999999998886 4688874
No 23
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=4.6e-44 Score=316.26 Aligned_cols=293 Identities=22% Similarity=0.290 Sum_probs=248.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccC-ccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~ 79 (319)
|||.++|||++|++.++|.... ..+|.++|||++|+|+++|+++++|++||||+..+. .+|+.|.+|..|.+++|+
T Consensus 32 Vkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~ 108 (329)
T TIGR02822 32 VRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCP 108 (329)
T ss_pred EEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCC
Confidence 6899999999999999875311 234799999999999999999999999999987554 379999999999999999
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 158 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~ 158 (319)
+..+++. ..+|+|+||+.+++..++++|+++++++++.+. ++.+||+++++++++++++|||+|+|++|++++|+|+.
T Consensus 109 ~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~VlV~G~g~iG~~a~~~a~~ 187 (329)
T TIGR02822 109 ASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGGRLGLYGFGGSAHLTAQVALA 187 (329)
T ss_pred CcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 8776543 357999999999999999999999999998664 77899999988899999999999999999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ +|++++++++++++++++|+++++++... ...++|+++++.+....+...+++++++|+++.
T Consensus 188 ~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~--------------~~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~ 252 (329)
T TIGR02822 188 QGA-TVHVMTRGAAARRLALALGAASAGGAYDT--------------PPEPLDAAILFAPAGGLVPPALEALDRGGVLAV 252 (329)
T ss_pred CCC-eEEEEeCChHHHHHHHHhCCceecccccc--------------CcccceEEEECCCcHHHHHHHHHhhCCCcEEEE
Confidence 999 68888899999999999999998763211 023689999988877789999999999999999
Q ss_pred ecccCC-cccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEE
Q 020928 239 IGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 316 (319)
Q Consensus 239 ~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 316 (319)
+|.... ...+....+..+++++.+++.. ...+.++++++++|+++ .++++|+| +|+++|++.+.+++..||+|
T Consensus 253 ~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~---~i~~~~~l--~~~~~A~~~~~~~~~~Gkvv 327 (329)
T TIGR02822 253 AGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVR---VTTHTYPL--SEADRALRDLKAGRFDGAAV 327 (329)
T ss_pred EeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCe---eEEEEEeH--HHHHHHHHHHHcCCCceEEE
Confidence 997432 2244555567788999887664 44678899999999984 35688988 99999999999999999998
Q ss_pred E
Q 020928 317 F 317 (319)
Q Consensus 317 i 317 (319)
+
T Consensus 328 l 328 (329)
T TIGR02822 328 L 328 (329)
T ss_pred e
Confidence 7
No 24
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.9e-43 Score=317.25 Aligned_cols=318 Identities=76% Similarity=1.292 Sum_probs=268.0
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|++++.+...+.+....|.++|||++|+|+++|+++.+|++||+|++.+..+|+.|..|..|.+.+|+.
T Consensus 46 Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~ 125 (364)
T PLN02702 46 VRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPE 125 (364)
T ss_pred EEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCC
Confidence 68999999999999987643333333468899999999999999999999999999999889999999999999999987
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 160 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g 160 (319)
..+++.....|+|+||+.++...++++|+++++++|++..++.+++++++..+++++++++|+|+|++|++++|+|+..|
T Consensus 126 ~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G 205 (364)
T PLN02702 126 MKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFG 205 (364)
T ss_pred ccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 65554444579999999999999999999999999987666777888887788999999999999999999999999999
Q ss_pred CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 161 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 161 ~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
++.++++++++++.++++++|++.++++.....++...+.++.+..+.++|++||++|+...+...+++++++|+++.+|
T Consensus 206 ~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 285 (364)
T PLN02702 206 APRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVG 285 (364)
T ss_pred CCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEc
Confidence 97788888899999999999999887765444566666655543345689999999997668899999999999999998
Q ss_pred ccCCcccccchHHHhcCcEEEEeeccCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEEe
Q 020928 241 LAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 318 (319)
.......+......++++++.+++.....++.++++++++.+.+.+.+.++|+++++++++|++.+.+++..+|+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 286 MGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred cCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 643333345556778899999887666678899999999998665667788777668999999999988888999985
No 25
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2.3e-43 Score=315.23 Aligned_cols=312 Identities=38% Similarity=0.632 Sum_probs=264.4
Q ss_pred CCcceEeeccCCccccccccc-cc-------cccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRC-AN-------FIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKA 72 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~-~~-------~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 72 (319)
|||.++++|++|++.+.+... .. ....+|.++|||++|+|+++|+++++|++||+|++.+..+|+.|.+|..
T Consensus 29 V~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 108 (351)
T cd08233 29 IKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKR 108 (351)
T ss_pred EEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhC
Confidence 689999999999987653211 00 0123689999999999999999999999999999988889999999999
Q ss_pred CCCCCCCCcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHH
Q 020928 73 GSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVT 152 (319)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~a 152 (319)
|.+.+|+...+.+.....|+|+||+.++...++++|+++++++|+++.++.+||+++..++++++++|+|+|+|++|+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~~~~~g~~vlI~g~g~vG~~a 188 (351)
T cd08233 109 GLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWHAVRRSGFKPGDTALVLGAGPIGLLT 188 (351)
T ss_pred cCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHH
Confidence 99999987765544334799999999999999999999999999877788899999977899999999999999999999
Q ss_pred HHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcC
Q 020928 153 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP 232 (319)
Q Consensus 153 i~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~ 232 (319)
+|+|+.+|++.|+++++++++.++++++|++.++++. ..++.+.+.++. .+.++|++||++|+...+..+++++++
T Consensus 189 ~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~--~~~~~~~l~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~ 264 (351)
T cd08233 189 ILALKAAGASKIIVSEPSEARRELAEELGATIVLDPT--EVDVVAEVRKLT--GGGGVDVSFDCAGVQATLDTAIDALRP 264 (351)
T ss_pred HHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCC--ccCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHhccC
Confidence 9999999997788888999999999999999888753 345666655543 345799999999976688999999999
Q ss_pred CCEEEEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhH-HHHHHHHhcCC
Q 020928 233 GGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEI-EDAFEISAQGG 310 (319)
Q Consensus 233 ~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~ 310 (319)
+|+++.+|.......+....+..+++++.+.+.+ .+.++++++++++|++++.+.++++|++ +++ ++|++.+.+++
T Consensus 265 ~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--~e~~~~a~~~~~~~~ 342 (351)
T cd08233 265 RGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKIDAEPLITSRIPL--EDIVEKGFEELINDK 342 (351)
T ss_pred CCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHHhCC
Confidence 9999999975544455666677899999998766 5789999999999999877778888998 996 78999999887
Q ss_pred C-ceEEEEe
Q 020928 311 N-AIKVMFN 318 (319)
Q Consensus 311 ~-~gkvvi~ 318 (319)
. .+|+|+.
T Consensus 343 ~~~~k~v~~ 351 (351)
T cd08233 343 EQHVKILVS 351 (351)
T ss_pred CCceEEEeC
Confidence 6 4999974
No 26
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=9.7e-44 Score=317.95 Aligned_cols=303 Identities=24% Similarity=0.349 Sum_probs=242.2
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++|||++|++.++|.........+|.++|||++|+|+++|++ ++|++||||+..+..+|+.|.+|..|++++|+.
T Consensus 30 Vkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~ 108 (355)
T cd08230 30 VRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCET 108 (355)
T ss_pred EEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCC
Confidence 6899999999999999875321111246899999999999999999 999999999998888999999999999999987
Q ss_pred cccc--cCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHh-------cCCCCCCeEEEECCCHHHHH
Q 020928 81 MRFF--GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR-------ANVGPETNVMIMGSGPIGLV 151 (319)
Q Consensus 81 ~~~~--~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~-------~~~~~~~~vlI~G~g~vG~~ 151 (319)
..++ +....+|+|+||+.++++.++++|++++ +++++..++++++.++.. .+++++++|+|+|+|++|++
T Consensus 109 ~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~ 187 (355)
T cd08230 109 GEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLL 187 (355)
T ss_pred cceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHH
Confidence 6543 2223579999999999999999999999 666655666665554422 33678999999999999999
Q ss_pred HHHHHHHcCCCeEEEecC---ChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHH
Q 020928 152 TLLAARAFGAPRIIITDV---DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 228 (319)
Q Consensus 152 ai~la~~~g~~~vv~v~~---~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~ 228 (319)
++|+|+..|+ +|+++++ +++++++++++|++.+ ++.. +++.+ . . ...++|+|||++|++..+...++
T Consensus 188 a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~v-~~~~--~~~~~-~---~--~~~~~d~vid~~g~~~~~~~~~~ 257 (355)
T cd08230 188 AALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATYV-NSSK--TPVAE-V---K--LVGEFDLIIEATGVPPLAFEALP 257 (355)
T ss_pred HHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEe-cCCc--cchhh-h---h--hcCCCCEEEECcCCHHHHHHHHH
Confidence 9999999999 6887876 6889999999999864 4322 23322 1 1 13579999999998767899999
Q ss_pred hhcCCCEEEEecccCC--ccccc----chHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCC----CCCCceeeeecCChh
Q 020928 229 ATRPGGKVCLIGLAKT--EMTVA----LTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI----DVKPLITHRFGFTQK 297 (319)
Q Consensus 229 ~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~ 297 (319)
+++++|+++.+|.... ..++. ...+.++++++.|+... .++++++++++.++.+ .+.+.++++|++ +
T Consensus 258 ~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l--~ 335 (355)
T cd08230 258 ALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPL--E 335 (355)
T ss_pred HccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHHHHHHhcccccccchHHheeeeecH--H
Confidence 9999999999997543 22333 34577899999998765 5678899999998873 246778899999 9
Q ss_pred hHHHHHHHHhcCCCceEEEEeC
Q 020928 298 EIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 298 ~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
++.+|++.++++. +|+++++
T Consensus 336 ~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 336 EFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHHHHHhcccCC--eEEEeeC
Confidence 9999999887553 5999875
No 27
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=4.5e-43 Score=311.55 Aligned_cols=297 Identities=23% Similarity=0.356 Sum_probs=233.0
Q ss_pred CCcceEeeccCCcccccccccccc-ccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANF-IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~-~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 79 (319)
|||+++|||++|+++++|...... ...+|.++|||++|+|+++|.+ +|++||||+..+..+|+. ..| +..++|+
T Consensus 30 Vkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~~-~~~--~~~~~c~ 104 (341)
T cd08237 30 VRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVEK-DEI--IPENYLP 104 (341)
T ss_pred EEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCchh-ccc--chhccCC
Confidence 689999999999999988542211 2357999999999999998864 799999999987777763 344 3456676
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHh---cCCCCCCeEEEECCCHHHHHHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR---ANVGPETNVMIMGSGPIGLVTLLAA 156 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~---~~~~~~~~vlI~G~g~vG~~ai~la 156 (319)
...+.+. ..+|+|+||+.++++.++++|+++++++|+++.+++++|+++.. ..++++++|||+|+|++|++++|+|
T Consensus 105 ~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a 183 (341)
T cd08237 105 SSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLL 183 (341)
T ss_pred CcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 6554432 24799999999999999999999999999988899999999853 4578999999999999999999999
Q ss_pred HH-cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCC---hHHHHHHHHhhcC
Q 020928 157 RA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF---DKTMSTALNATRP 232 (319)
Q Consensus 157 ~~-~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~---~~~~~~~~~~l~~ 232 (319)
+. .|..+|++++++++|++++++++++..++ + +.+ ..++|+|||++|+ +..+..+++++++
T Consensus 184 ~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~------~-------~~~--~~g~d~viD~~G~~~~~~~~~~~~~~l~~ 248 (341)
T cd08237 184 KQIYPESKLVVFGKHQEKLDLFSFADETYLID------D-------IPE--DLAVDHAFECVGGRGSQSAINQIIDYIRP 248 (341)
T ss_pred HHhcCCCcEEEEeCcHhHHHHHhhcCceeehh------h-------hhh--ccCCcEEEECCCCCccHHHHHHHHHhCcC
Confidence 86 66657888999999999998866543221 1 111 2369999999994 4578899999999
Q ss_pred CCEEEEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcC---CCCCCCceeeeecCC-hhhHHHHHHHHh
Q 020928 233 GGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG---KIDVKPLITHRFGFT-QKEIEDAFEISA 307 (319)
Q Consensus 233 ~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~-~~~~~~a~~~~~ 307 (319)
+|+++.+|....+.++....+..+++++.++... .++++++++++.++ ...+.+.++++|+++ ++++.++++.+.
T Consensus 249 ~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~ 328 (341)
T cd08237 249 QGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDL 328 (341)
T ss_pred CcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHh
Confidence 9999999975544455666678899999998765 45688999999999 334678888888872 245666666655
Q ss_pred cCCCceEEEEeC
Q 020928 308 QGGNAIKVMFNL 319 (319)
Q Consensus 308 ~~~~~gkvvi~~ 319 (319)
++ ..||+|+++
T Consensus 329 ~~-~~gKvvi~~ 339 (341)
T cd08237 329 TN-SWGKTVMEW 339 (341)
T ss_pred hc-CcceEEEEe
Confidence 54 679999864
No 28
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=7.8e-42 Score=305.46 Aligned_cols=301 Identities=21% Similarity=0.299 Sum_probs=243.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccC-ccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~ 79 (319)
|||.++|||++|++.+.|... ...+|.++|||++|+|+++|+++++|++||+|+..+. .+|++|.+|..|.+++|.
T Consensus 39 Vrv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~ 115 (357)
T PLN02514 39 IKVIYCGICHTDLHQIKNDLG---MSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCN 115 (357)
T ss_pred EEEEEeccChHHHHhhcCCcC---cCCCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCC
Confidence 689999999999999876431 1246899999999999999999999999999986443 379999999999999998
Q ss_pred Ccccc------cCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEECCCHHHHH
Q 020928 80 EMRFF------GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGSGPIGLV 151 (319)
Q Consensus 80 ~~~~~------~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ 151 (319)
...+. .+....|+|+||+.++...++++|+++++++|+.++ .+.+||+++.. ...+++++++|+|+|++|++
T Consensus 116 ~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~ 195 (357)
T PLN02514 116 KRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHM 195 (357)
T ss_pred CccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHH
Confidence 75321 111246999999999999999999999999998775 66889999865 55689999999999999999
Q ss_pred HHHHHHHcCCCeEEEecCChhHH-HHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhh
Q 020928 152 TLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 230 (319)
Q Consensus 152 ai~la~~~g~~~vv~v~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l 230 (319)
++|+|+..|+ .+++++++++++ +.++++|++.+++... . ..+.++. .++|++||++|....+..+++++
T Consensus 196 av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~--~---~~~~~~~----~~~D~vid~~g~~~~~~~~~~~l 265 (357)
T PLN02514 196 GVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSD--A---AEMQEAA----DSLDYIIDTVPVFHPLEPYLSLL 265 (357)
T ss_pred HHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCC--h---HHHHHhc----CCCcEEEECCCchHHHHHHHHHh
Confidence 9999999999 466666666555 4556799987765322 1 2233322 36999999999766888999999
Q ss_pred cCCCEEEEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcC
Q 020928 231 RPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 309 (319)
Q Consensus 231 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 309 (319)
+++|+++.+|.......+....+..+++++.+++.. ..+++++++++++|++ .+.+ ++|++ +++.+|++.+.++
T Consensus 266 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~ 340 (357)
T PLN02514 266 KLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGL--TSMI-EVVKM--DYVNTAFERLEKN 340 (357)
T ss_pred ccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCC--cCcE-EEEcH--HHHHHHHHHHHcC
Confidence 999999999976544455566677899999998765 3468899999999987 4555 57888 9999999999999
Q ss_pred CCceEEEEeC
Q 020928 310 GNAIKVMFNL 319 (319)
Q Consensus 310 ~~~gkvvi~~ 319 (319)
...||+++++
T Consensus 341 ~~~gk~v~~~ 350 (357)
T PLN02514 341 DVRYRFVVDV 350 (357)
T ss_pred CCceeEEEEc
Confidence 8889999864
No 29
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.2e-42 Score=277.87 Aligned_cols=277 Identities=26% Similarity=0.355 Sum_probs=236.6
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||..|+|+|..|.-+++|... +.+.|+++|.|++|+|+.+|++|++|++||||+..
T Consensus 40 iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl--------------------- 95 (336)
T KOG1197|consen 40 IKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYL--------------------- 95 (336)
T ss_pred EeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEecCCccccccccEEEEe---------------------
Confidence 578899999999988887541 56889999999999999999999999999999863
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
++.|.|+|+..+|...++++|+.+++++||++. -+.|||.-+++ .++++|++||++. +|++|+++.|+++
T Consensus 96 -------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~r 168 (336)
T KOG1197|consen 96 -------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLR 168 (336)
T ss_pred -------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHH
Confidence 368999999999999999999999999999775 77888887766 8999999999996 7999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .+|.+.++.++++.+++.|+.+.|+|. .+|+.+.+.+++ ++.|+|+++|.+|.+ .+...+.+|++.|.++
T Consensus 169 a~~a-~tI~~asTaeK~~~akenG~~h~I~y~--~eD~v~~V~kiT--ngKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mV 242 (336)
T KOG1197|consen 169 AVGA-HTIATASTAEKHEIAKENGAEHPIDYS--TEDYVDEVKKIT--NGKGVDAVYDSVGKD-TFAKSLAALKPMGKMV 242 (336)
T ss_pred hcCc-EEEEEeccHHHHHHHHhcCCcceeecc--chhHHHHHHhcc--CCCCceeeeccccch-hhHHHHHHhccCceEE
Confidence 9999 788888999999999999999999874 468888888886 488999999999976 8999999999999999
Q ss_pred EecccC-CcccccchHHHhcCcEEEEeecc-----CC----CHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHh
Q 020928 238 LIGLAK-TEMTVALTPAAAREVDVIGIFRY-----RS----TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 307 (319)
Q Consensus 238 ~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-----~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~ 307 (319)
.+|+.. ...+++...+..+.+++...... .. -..+++.++.+|.+ ++.+.++|++ +++.+|+..++
T Consensus 243 SfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~l--k~~I~~~ypl--s~vadA~~die 318 (336)
T KOG1197|consen 243 SFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHL--KIHIDHVYPL--SKVADAHADIE 318 (336)
T ss_pred EeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCcc--ceeeeeecch--HHHHHHHHHHH
Confidence 999643 34455555565565555432221 22 23467888888988 7778999999 99999999999
Q ss_pred cCCCceEEEEe
Q 020928 308 QGGNAIKVMFN 318 (319)
Q Consensus 308 ~~~~~gkvvi~ 318 (319)
+.+..||+++-
T Consensus 319 srktvGkvlLl 329 (336)
T KOG1197|consen 319 SRKTVGKVLLL 329 (336)
T ss_pred hhhccceEEEe
Confidence 99999999974
No 30
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=5.9e-41 Score=300.83 Aligned_cols=310 Identities=29% Similarity=0.512 Sum_probs=255.8
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCC------CCCCCEEEEccCccCCCCccccCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS------LEVGDRVALEPGISCGHCSLCKAGS 74 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~------~~~Gd~V~~~~~~~~~~~~~~~~~~ 74 (319)
|||.++++|++|+....|.... ..+|.++|||++|+|+++|+++++ |++||+|++.+..+|+.|..|+.|.
T Consensus 30 V~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~ 106 (361)
T cd08231 30 VRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGD 106 (361)
T ss_pred EEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcC
Confidence 6899999999999998875311 457899999999999999999986 9999999999888999999999999
Q ss_pred CCCCCCcccccCC------CCCCcceeEEeecCC-ceEeCCCCCChhhhhcc-chhHHHHHHHHh-cCCCCCCeEEEECC
Q 020928 75 YNLCPEMRFFGSP------PTNGSLAHKVVHPAK-LCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGS 145 (319)
Q Consensus 75 ~~~~~~~~~~~~~------~~~g~~~e~~~~~~~-~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G~ 145 (319)
.++|....+++.. ...|+|+||+.++++ .++++|+++++++|+++ .++.|||+++.+ ...+++++|||+|+
T Consensus 107 ~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~ 186 (361)
T cd08231 107 PTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGA 186 (361)
T ss_pred ccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECC
Confidence 9999876655432 236999999999986 79999999999988887 588999999976 45569999999999
Q ss_pred CHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCc-chhHHHHHhhhhcCCCccEEEEccCChHHHH
Q 020928 146 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE-DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS 224 (319)
Q Consensus 146 g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~ 224 (319)
|++|++++|+|+.+|++.|+++++++++.++++++|++.++++..... ++...+.++. .+.++|++||++|+...+.
T Consensus 187 g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~ 264 (361)
T cd08231 187 GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDIT--GGRGADVVIEASGHPAAVP 264 (361)
T ss_pred CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHh--CCCCCcEEEECCCChHHHH
Confidence 999999999999999966888888999999999999988877543211 1112333332 3568999999999866788
Q ss_pred HHHHhhcCCCEEEEecccCC--cccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcC--CCCCCCceeeeecCChhhH
Q 020928 225 TALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG--KIDVKPLITHRFGFTQKEI 299 (319)
Q Consensus 225 ~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~ 299 (319)
..+++++++|+++.+|.... ...+....+..+++.+.+++.. .+.+.++++++.++ .+.+.+.++++|++ +++
T Consensus 265 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~ 342 (361)
T cd08231 265 EGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFPFAELVTHRYPL--EDI 342 (361)
T ss_pred HHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHHHHhccCcCCchhheeeeeeH--HHH
Confidence 99999999999999986432 2234444568889999888765 56789999999998 55567777888999 999
Q ss_pred HHHHHHHhcCCCceEEEEe
Q 020928 300 EDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 300 ~~a~~~~~~~~~~gkvvi~ 318 (319)
++|++.++++. .+|++|+
T Consensus 343 ~~a~~~~~~~~-~~k~vi~ 360 (361)
T cd08231 343 NEALELAESGT-ALKVVID 360 (361)
T ss_pred HHHHHHHHcCC-ceEEEeC
Confidence 99999998876 4899986
No 31
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=9.4e-41 Score=297.49 Aligned_cols=312 Identities=51% Similarity=0.936 Sum_probs=258.7
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|+.|++.+.+...+.+....|.++|+|++|+|+++|+++++|++||+|++.+..+|+.|.+|+.|.+++|++
T Consensus 27 V~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 106 (343)
T cd05285 27 VRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPD 106 (343)
T ss_pred EEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcC
Confidence 58999999999998765332222233467889999999999999999999999999998888999999999999999998
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 160 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g 160 (319)
..+.+.....|+|+||+.++++.++++|+++++++|+.+.++.+|+++++.++++++++++|.|+|++|++++|+|+.+|
T Consensus 107 ~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G 186 (343)
T cd05285 107 MRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFG 186 (343)
T ss_pred ccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 75544334579999999999999999999999999988778888999887799999999999988999999999999999
Q ss_pred CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcch---hHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 161 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDV---DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 161 ~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~---~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
+++|+++.+++++.++++++|++.++++.. .++ ...+.+.. .+.++|++|||.|+...++..+++++++|+++
T Consensus 187 ~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~~~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v 262 (343)
T cd05285 187 ATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELL--GGKGPDVVIECTGAESCIQTAIYATRPGGTVV 262 (343)
T ss_pred CcEEEEECCCHHHHHHHHHcCCcEEecccc--ccchhHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEE
Confidence 965888888899999999999998887543 232 44444433 35679999999998657889999999999999
Q ss_pred EecccCCcccccchHHHhcCcEEEEeeccCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCC-CceEEE
Q 020928 238 LIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVM 316 (319)
Q Consensus 238 ~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvv 316 (319)
.+|.......++.....++++++.++....+.+++++++++++.+.+.+...+++++ +++.+|++.+.+++ ..+|++
T Consensus 263 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~ 340 (343)
T cd05285 263 LVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITHRFPL--EDAVEAFETAAKGKKGVIKVV 340 (343)
T ss_pred EEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEEEEeH--HHHHHHHHHHHcCCCCeeEEE
Confidence 998654333444456778888888877666778899999999987554556778888 99999999998884 568998
Q ss_pred Ee
Q 020928 317 FN 318 (319)
Q Consensus 317 i~ 318 (319)
|.
T Consensus 341 ~~ 342 (343)
T cd05285 341 IE 342 (343)
T ss_pred Ee
Confidence 74
No 32
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.4e-40 Score=294.53 Aligned_cols=307 Identities=26% Similarity=0.504 Sum_probs=253.1
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|++...|... ..++|.++|||++|+|+++|++++.|++||+|+..+..+|+.|.+|.+|++++|.+
T Consensus 29 V~v~~~gi~~~d~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 105 (339)
T PRK10083 29 VKVKLAGICGSDSHIYRGHNP---FAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTS 105 (339)
T ss_pred EEEEEEEEcccchHHHcCCCC---cCCCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCC
Confidence 689999999999998876431 12468999999999999999999999999999999989999999999999999988
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH-c
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA-F 159 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~-~ 159 (319)
+.+++. ..+|+|+||+.++...++++|+++++++++.+.++.+++++++..+++++++|+|+|+|++|++++|+|+. +
T Consensus 106 ~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~ 184 (339)
T PRK10083 106 LVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVY 184 (339)
T ss_pred CceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhC
Confidence 765433 34699999999999999999999999888766678888876677899999999999999999999999996 6
Q ss_pred CCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEe
Q 020928 160 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 160 g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
|++.++++++++++.++++++|++.++++.. .++...+. . .+.++|++||++|++..+...+++++++|+++.+
T Consensus 185 G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~---~-~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 258 (339)
T PRK10083 185 NVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALE---E-KGIKPTLIIDAACHPSILEEAVTLASPAARIVLM 258 (339)
T ss_pred CCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHh---c-CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEE
Confidence 9977888999999999999999998877532 34433332 1 2345679999999776889999999999999999
Q ss_pred cccCCcccccchHHHhcCcEEEEeeccCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcC-CCceEEEEe
Q 020928 240 GLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFN 318 (319)
Q Consensus 240 g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi~ 318 (319)
|.......+....+..+++++.+.....+.+++++++++++++++.+.+.++|++ +++++|++.++++ ...+|+++.
T Consensus 259 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~kvvv~ 336 (339)
T PRK10083 259 GFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFDF--QHVADAIELFEKDQRHCCKVLLT 336 (339)
T ss_pred ccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeeecH--HHHHHHHHHHhcCCCceEEEEEe
Confidence 8654322333334445777777765556678999999999999655456788888 9999999999865 467899986
Q ss_pred C
Q 020928 319 L 319 (319)
Q Consensus 319 ~ 319 (319)
+
T Consensus 337 ~ 337 (339)
T PRK10083 337 F 337 (339)
T ss_pred c
Confidence 4
No 33
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=4.1e-41 Score=294.88 Aligned_cols=277 Identities=18% Similarity=0.239 Sum_probs=221.4
Q ss_pred CCcceEeec-cCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYC-MQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~-~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 79 (319)
|||+++||| ++|+++++|.........+|.++|||++|+|+++|+++ +|++||||+.. |..|..|..
T Consensus 30 Vkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~~------- 97 (308)
T TIGR01202 30 VEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDVR------- 97 (308)
T ss_pred EEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEEEEe----Ccccccccc-------
Confidence 689999996 79999887753211113579999999999999999998 69999999863 222333211
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHc
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAF 159 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~ 159 (319)
...|+|+||+.++++.++++|++++++. +.+.+..+||+++++.. .++++++|+|+|++|++++|+|+++
T Consensus 98 --------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a~~~~~~~~-~~~~~vlV~G~G~vG~~a~q~ak~~ 167 (308)
T TIGR01202 98 --------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATARHAVAGAE-VKVLPDLIVGHGTLGRLLARLTKAA 167 (308)
T ss_pred --------ccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHHHHHHHhcc-cCCCcEEEECCCHHHHHHHHHHHHc
Confidence 1259999999999999999999999864 55666789999997653 3688999999999999999999999
Q ss_pred CCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEe
Q 020928 160 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 160 g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
|++.|++++..+++++.++++ .++++.. + .+.++|++|||+|++..++.++++++++|+++.+
T Consensus 168 G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~-----------~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~ 230 (308)
T TIGR01202 168 GGSPPAVWETNPRRRDGATGY---EVLDPEK---D-----------PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLA 230 (308)
T ss_pred CCceEEEeCCCHHHHHhhhhc---cccChhh---c-----------cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEE
Confidence 997777777777777665543 3333211 0 1457999999999976789999999999999999
Q ss_pred cccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEEe
Q 020928 240 GLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 240 g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 318 (319)
|......+++...++.+++++.++..+ .++++++++++++|++++.+.++++|++ +++++|++.+.++...+|++++
T Consensus 231 G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 231 GFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPA--SDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred eecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecH--HHHHHHHHHHhcCcCceEEEeC
Confidence 976544556666777888999887766 5679999999999999888888999999 9999999988877778999974
No 34
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=3.8e-41 Score=291.35 Aligned_cols=260 Identities=24% Similarity=0.427 Sum_probs=219.1
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEEEccCccCCCCccccCCCCCCCCCcccccCC------CCCCcceeEEe
Q 020928 31 VIGHECAGIIEEVGSEVK------SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP------PTNGSLAHKVV 98 (319)
Q Consensus 31 i~G~e~~G~V~~~G~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~e~~~ 98 (319)
++|||++|+|+++|++|+ +|++||||+..+..+|+.|.+|..|++++|++..+++.. ..+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999999 899999999988889999999999999999987655432 24799999999
Q ss_pred ecCC-ceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHH
Q 020928 99 HPAK-LCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 176 (319)
Q Consensus 99 ~~~~-~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~ 176 (319)
+++. .++++|+++++++|+.+. .+.++|+++++....++++|||+|+|++|++++|+|+.+|+++|++++++++|+++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~ 160 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL 160 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 9997 699999999999998775 56889999988777799999999999999999999999999768888889999999
Q ss_pred HHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEecccC--CcccccchHHH
Q 020928 177 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPAA 254 (319)
Q Consensus 177 ~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~ 254 (319)
++++|++.++++.. ....+.+++ .+.++|++||++|++..++.++++++++|+++.+|... ...+++...+.
T Consensus 161 a~~~Ga~~~i~~~~----~~~~~~~~~--~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~ 234 (280)
T TIGR03366 161 ALSFGATALAEPEV----LAERQGGLQ--NGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVV 234 (280)
T ss_pred HHHcCCcEecCchh----hHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHH
Confidence 99999988876421 223333332 35689999999998878899999999999999999642 23355666788
Q ss_pred hcCcEEEEeecc-CCCHHHHHHHHHcC--CCCCCCceeeeecCChhh
Q 020928 255 AREVDVIGIFRY-RSTWPLCIEFLRSG--KIDVKPLITHRFGFTQKE 298 (319)
Q Consensus 255 ~~~~~i~~~~~~-~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~ 298 (319)
.+++++.++... .++++++++++.++ ++++.++++++|++ ++
T Consensus 235 ~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~ 279 (280)
T TIGR03366 235 RRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD 279 (280)
T ss_pred hCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence 899999998876 45789999999985 56666778888888 65
No 35
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.5e-40 Score=293.49 Aligned_cols=310 Identities=25% Similarity=0.341 Sum_probs=251.1
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++|+|++|++...+.... .+.|.++|||++|+|+++|+++++|++||+|++.+..+|+.|..|..|++++|..
T Consensus 29 Ikv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~ 105 (351)
T cd08285 29 VRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGG 105 (351)
T ss_pred EEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcC
Confidence 6899999999999988764321 3568999999999999999999999999999998778999999999999999986
Q ss_pred ccc--ccCCCCCCcceeEEeecCC--ceEeCCCCCChhhhhcc-chhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHH
Q 020928 81 MRF--FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 155 (319)
Q Consensus 81 ~~~--~~~~~~~g~~~e~~~~~~~--~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~l 155 (319)
... .......|+|+||+.++.+ .++++|+++++++++.+ .++.+||++++.++++++++|||+|+|++|++++|+
T Consensus 106 ~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~iG~~~~~l 185 (351)
T cd08285 106 MLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAVFGIGPVGLMAVAG 185 (351)
T ss_pred CCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHHHHccCCCCCCEEEEECCCHHHHHHHHH
Confidence 421 1112347999999999974 89999999999999887 478899999877899999999999999999999999
Q ss_pred HHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCE
Q 020928 156 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK 235 (319)
Q Consensus 156 a~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~ 235 (319)
|+..|+..++++++++++.++++++|++.++++.. .++...+.++. .+.++|++||++|++..+..++++++++|+
T Consensus 186 ak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~ 261 (351)
T cd08285 186 ARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLT--GGKGVDAVIIAGGGQDTFEQALKVLKPGGT 261 (351)
T ss_pred HHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHHh--CCCCCcEEEECCCCHHHHHHHHHHhhcCCE
Confidence 99999977889999999999999999988877532 35555555543 356799999999987788999999999999
Q ss_pred EEEecccCCcc--cccchH--HHhcCcEEEEeecc--CCCHHHHHHHHHcCCCCCC-CceeeeecCChhhHHHHHHHHhc
Q 020928 236 VCLIGLAKTEM--TVALTP--AAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVK-PLITHRFGFTQKEIEDAFEISAQ 308 (319)
Q Consensus 236 ~v~~g~~~~~~--~~~~~~--~~~~~~~i~~~~~~--~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~a~~~~~~ 308 (319)
++.+|...... .++... ...+..++.+.... .+.++++++++++|++.+. ....+++++ +++++|++.+++
T Consensus 262 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l--~~~~~a~~~~~~ 339 (351)
T cd08285 262 ISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGF--DDIEEALMLMKD 339 (351)
T ss_pred EEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCCCChhhceeccccCH--HHHHHHHHHHhc
Confidence 99998644322 222111 23455566655432 5678999999999999663 234455788 999999999998
Q ss_pred CC-CceEEEEeC
Q 020928 309 GG-NAIKVMFNL 319 (319)
Q Consensus 309 ~~-~~gkvvi~~ 319 (319)
++ ...|+++++
T Consensus 340 ~~~~~~k~~~~~ 351 (351)
T cd08285 340 KPDDLIKPVIIF 351 (351)
T ss_pred ccCCeEEEEEeC
Confidence 86 578999875
No 36
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=6e-40 Score=294.86 Aligned_cols=309 Identities=24% Similarity=0.409 Sum_probs=248.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|++.+.|.. ...+|.++|||++|+|+++|+++++|++||+|++.+..+|++|.+|..|++++|+.
T Consensus 37 vkv~~~gi~~~D~~~~~g~~----~~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~ 112 (373)
T cd08299 37 IKIVATGICRSDDHVVSGKL----VTPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLK 112 (373)
T ss_pred EEEEEEEcCcccHHHhcCCC----CCCCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcC
Confidence 68999999999999998753 23578999999999999999999999999999998888999999999999999987
Q ss_pred cccccC--------------------CCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCC
Q 020928 81 MRFFGS--------------------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPET 138 (319)
Q Consensus 81 ~~~~~~--------------------~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~ 138 (319)
....+. ....|+|+||+.++.+.++++|+++++++++++. ++.+||+++ ..+++++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~ 192 (373)
T cd08299 113 NDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGS 192 (373)
T ss_pred cccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCC
Confidence 654210 0035899999999999999999999999999886 788999886 558899999
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
+|+|+|+|++|++++++|+.+|++.|+++++++++.++++++|++.++++.....++...+.++. ++++|++||++|
T Consensus 193 ~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~---~~~~d~vld~~g 269 (373)
T cd08299 193 TCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMT---DGGVDFSFEVIG 269 (373)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHh---CCCCeEEEECCC
Confidence 99999999999999999999998678888999999999999999888875432233455555543 357999999999
Q ss_pred ChHHHHHHHHh-hcCCCEEEEecccCCcccccchH-HHhcCcEEEEeecc----CCCHHHHHHHHHcCCCCCCCceeeee
Q 020928 219 FDKTMSTALNA-TRPGGKVCLIGLAKTEMTVALTP-AAAREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRF 292 (319)
Q Consensus 219 ~~~~~~~~~~~-l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (319)
++..+..++.. ++++|+++.+|.......+.... ...++..+.+++.. ...+.++++.+.++.+++.+.+.++|
T Consensus 270 ~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (373)
T cd08299 270 RLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTL 349 (373)
T ss_pred CcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeee
Confidence 76667775665 46899999999653322222222 23467777776543 24566788888888777777778889
Q ss_pred cCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 293 GFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 293 ~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
++ +++++|++.+++++. .|+++++
T Consensus 350 ~l--~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 350 PF--EKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred cH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence 98 999999999887754 5888764
No 37
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.2e-39 Score=291.12 Aligned_cols=311 Identities=29% Similarity=0.539 Sum_probs=255.5
Q ss_pred CCcceEeeccCCcccccccccc------ccccCCCcccccceeEEEEEeCCCCC--CCCCCCEEEEccCccCCCCccccC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCA------NFIVKKPMVIGHECAGIIEEVGSEVK--SLEVGDRVALEPGISCGHCSLCKA 72 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~------~~~~~~p~i~G~e~~G~V~~~G~~v~--~~~~Gd~V~~~~~~~~~~~~~~~~ 72 (319)
||+.++|+|++|+....|.... +...++|.++|||++|+|+++|++++ +|++||+|++.+..+|+.|.+|..
T Consensus 29 V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~ 108 (350)
T cd08256 29 VKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNR 108 (350)
T ss_pred EEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhC
Confidence 6899999999999988774210 00124688999999999999999999 999999999999999999999999
Q ss_pred CCCCCCCCcccccC-CCCCCcceeEEeecCC-ceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHH
Q 020928 73 GSYNLCPEMRFFGS-PPTNGSLAHKVVHPAK-LCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 150 (319)
Q Consensus 73 ~~~~~~~~~~~~~~-~~~~g~~~e~~~~~~~-~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~ 150 (319)
|...+|....+++. ....|+|+||+.++++ .++++|+++++++|+.+.++.++|++++.++++++++|+|.|+|++|+
T Consensus 109 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vG~ 188 (350)
T cd08256 109 GQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPLACALHAVDRANIKFDDVVVLAGAGPLGL 188 (350)
T ss_pred cCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHH
Confidence 99999987655433 1246999999999988 678999999999998777888999998778999999999988999999
Q ss_pred HHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhh
Q 020928 151 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 230 (319)
Q Consensus 151 ~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l 230 (319)
+++++|+.+|+++++++++++++.++++++|++.++++. ..++...+.++. .+.++|++||++|+...+..+++++
T Consensus 189 ~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~~~--~~~~vdvvld~~g~~~~~~~~~~~l 264 (350)
T cd08256 189 GMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEKIKELT--GGYGCDIYIEATGHPSAVEQGLNMI 264 (350)
T ss_pred HHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHh
Confidence 999999999997888899999999999999998876643 345555555543 3567999999999765788899999
Q ss_pred cCCCEEEEecccCCcccccchHH-HhcCcEEEEeeccCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcC
Q 020928 231 RPGGKVCLIGLAKTEMTVALTPA-AAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 309 (319)
Q Consensus 231 ~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 309 (319)
+++|+++.+|.......+....+ ..+++.+.++......+.++++++++|.+++.+.+.++|++ +++++|++.++++
T Consensus 265 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~ 342 (350)
T cd08256 265 RKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASGRLPTDGIVTHQFPL--EDFEEAFELMARG 342 (350)
T ss_pred hcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcCCCChhHheEEEeEH--HHHHHHHHHHHhC
Confidence 99999999986443333333322 35667777776656678899999999999665456788888 9999999999999
Q ss_pred CCceEEEE
Q 020928 310 GNAIKVMF 317 (319)
Q Consensus 310 ~~~gkvvi 317 (319)
...+|+++
T Consensus 343 ~~~~kvv~ 350 (350)
T cd08256 343 DDSIKVVL 350 (350)
T ss_pred CCceEEeC
Confidence 88899875
No 38
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=7.2e-40 Score=297.79 Aligned_cols=301 Identities=22% Similarity=0.329 Sum_probs=236.9
Q ss_pred CCcceEeeccCCccccc-ccccccc---ccCCCcccccceeEEEEEeCCCCC-CCCCCCEEEEccCccCCCCccccCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQ-TMRCANF---IVKKPMVIGHECAGIIEEVGSEVK-SLEVGDRVALEPGISCGHCSLCKAGSY 75 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~-~~~~~~~---~~~~p~i~G~e~~G~V~~~G~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~ 75 (319)
|||.++|||++|++.+. |...... ..++|.++|||++|+|+++|++|+ +|++||||++.+..+|+.|.+|. +.
T Consensus 31 VkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~-~~- 108 (410)
T cd08238 31 VRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCP-GY- 108 (410)
T ss_pred EEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCC-Cc-
Confidence 68999999999999763 4311110 124789999999999999999998 69999999998877888887762 11
Q ss_pred CCCCCcccccCCCCCCcceeEEeecCC----ceEeCCCCCChhhhhccchhHHH---HHHH---------HhcCCCCCCe
Q 020928 76 NLCPEMRFFGSPPTNGSLAHKVVHPAK----LCYKLPDNVSLEEGAMCEPLSVG---VHAC---------RRANVGPETN 139 (319)
Q Consensus 76 ~~~~~~~~~~~~~~~g~~~e~~~~~~~----~~~~iP~~~~~~~aa~~~~~~~a---~~~l---------~~~~~~~~~~ 139 (319)
+ ...+|+|+||+.++++ .++++|+++++++|+++.+++++ +.++ ++++++++++
T Consensus 109 ---------g-~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~ 178 (410)
T cd08238 109 ---------S-YTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGN 178 (410)
T ss_pred ---------c-ccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCE
Confidence 1 1247999999999987 58999999999999877554433 3332 3478899999
Q ss_pred EEEEC-CCHHHHHHHHHHHHcC--CCeEEEecCChhHHHHHHHc--------CCC-EeeccCCCCcchhHHHHHhhhhcC
Q 020928 140 VMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQRLSIARNL--------GAD-ETAKVSTDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 140 vlI~G-~g~vG~~ai~la~~~g--~~~vv~v~~~~~~~~~~~~~--------g~~-~v~~~~~~~~~~~~~i~~~~~~~~ 207 (319)
|+|+| +|++|++++|+|+.+| +.+|++++++++++++++++ |++ .++++.. ..++.+.+.+++ .+
T Consensus 179 VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t--~g 255 (410)
T cd08238 179 TAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELT--GG 255 (410)
T ss_pred EEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHh--CC
Confidence 99997 6999999999999975 45789999999999999997 655 3454321 135555555554 35
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEeccc-CC--cccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCC
Q 020928 208 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA-KT--EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID 283 (319)
Q Consensus 208 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~ 283 (319)
.++|++||++|++..+...+++++++|+++.++.. .. ..+++...+..+++++.|+... ..+++++++++++|+++
T Consensus 256 ~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~ 335 (410)
T cd08238 256 QGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLN 335 (410)
T ss_pred CCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCc
Confidence 68999999999877899999999999988876532 21 2345566788899999998765 45789999999999998
Q ss_pred CCCceeeeecCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 284 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
+.++++++|++ +++++|++.+. ++..||+|+.+
T Consensus 336 ~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl~~ 368 (410)
T cd08238 336 PARMVTHIGGL--NAAAETTLNLP-GIPGGKKLIYT 368 (410)
T ss_pred hhhcEEEEecH--HHHHHHHHHhh-ccCCceEEEEC
Confidence 88889999999 99999999999 77889999863
No 39
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=2.6e-39 Score=287.89 Aligned_cols=310 Identities=36% Similarity=0.661 Sum_probs=252.7
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+..++....+.+...+|.++|+|++|+|+++|+++++|++||+|++.+..+|++|.+|..|..++|+.
T Consensus 26 I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~ 105 (339)
T cd08232 26 VRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLN 105 (339)
T ss_pred EEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCcc
Confidence 68999999999998764221122223568899999999999999999999999999999888999999999999999998
Q ss_pred cccccC----CCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHH
Q 020928 81 MRFFGS----PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAA 156 (319)
Q Consensus 81 ~~~~~~----~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la 156 (319)
..+++. ....|+|+||+.++.+.++++|+++++++|+.+.++.++|+++......++++|||.|+|.+|++++|+|
T Consensus 106 ~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~VLI~g~g~vG~~~~~la 185 (339)
T cd08232 106 MRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAAA 185 (339)
T ss_pred ccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 665542 1247999999999999999999999999998767888999998664434999999998999999999999
Q ss_pred HHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEE
Q 020928 157 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV 236 (319)
Q Consensus 157 ~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~ 236 (319)
+.+|+++++++++++++.++++++|++.++++... + +..+.. ...++|++||+.|+....+..+++|+++|++
T Consensus 186 k~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~--~----~~~~~~-~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~ 258 (339)
T cd08232 186 RRAGAAEIVATDLADAPLAVARAMGADETVNLARD--P----LAAYAA-DKGDFDVVFEASGAPAALASALRVVRPGGTV 258 (339)
T ss_pred HHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCch--h----hhhhhc-cCCCccEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 99998668888888998899999999888765321 2 222221 2346999999999765788999999999999
Q ss_pred EEecccCCcccccchHHHhcCcEEEEeeccCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEE
Q 020928 237 CLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 316 (319)
Q Consensus 237 v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 316 (319)
+.++............+..+++++.+.....+.+++++++++++.+.+.+.+.+++++ ++++++++.+.++...||+|
T Consensus 259 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv 336 (339)
T cd08232 259 VQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVFPL--EEAAEAFALAADRTRSVKVQ 336 (339)
T ss_pred EEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEecH--HHHHHHHHHHHhCCCceeEE
Confidence 9998543222333344566888888877666678899999999998766667788888 99999999999888899999
Q ss_pred EeC
Q 020928 317 FNL 319 (319)
Q Consensus 317 i~~ 319 (319)
+++
T Consensus 337 v~~ 339 (339)
T cd08232 337 LSF 339 (339)
T ss_pred EeC
Confidence 874
No 40
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=7.3e-39 Score=287.35 Aligned_cols=306 Identities=27% Similarity=0.458 Sum_probs=250.8
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|++.+++.. ...+|.++|||++|+|+++|++++++++||+|++.+..+|+.|.+|..|.+.+|..
T Consensus 30 v~v~~~~i~~~d~~~~~g~~----~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~ 105 (365)
T cd05279 30 IKVVATGVCHTDLHVIDGKL----PTPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSK 105 (365)
T ss_pred EEEEEeeecchhHHHhcCCC----CCCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCC
Confidence 57899999999999987743 34568899999999999999999999999999998888999999999999999987
Q ss_pred cccccCCC--------------------CCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCC
Q 020928 81 MRFFGSPP--------------------TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPET 138 (319)
Q Consensus 81 ~~~~~~~~--------------------~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~ 138 (319)
..+++... ..|+|+||+.++++.++++|+++++++|+.+. .+.+||+++ +.+++++++
T Consensus 106 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~ 185 (365)
T cd05279 106 SRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGS 185 (365)
T ss_pred cccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCC
Confidence 66542110 24799999999999999999999999999886 788999887 458899999
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
+|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++++++....+.++...+.++. +.++|++||++|
T Consensus 186 ~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~---~~~~d~vid~~g 262 (365)
T cd05279 186 TCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMT---DGGVDYAFEVIG 262 (365)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHh---CCCCcEEEECCC
Confidence 99999999999999999999999778888889999999999999888765332224545555443 467999999998
Q ss_pred ChHHHHHHHHhhc-CCCEEEEecccC--CcccccchHHHhcCcEEEEeec----cCCCHHHHHHHHHcCCCCCCCceeee
Q 020928 219 FDKTMSTALNATR-PGGKVCLIGLAK--TEMTVALTPAAAREVDVIGIFR----YRSTWPLCIEFLRSGKIDVKPLITHR 291 (319)
Q Consensus 219 ~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~ 291 (319)
....+...+++++ ++|+++.+|... ....+....+ .++.++.+.+. ..+.+.+++++++++.+++.+...++
T Consensus 263 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~ 341 (365)
T cd05279 263 SADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHV 341 (365)
T ss_pred CHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeee
Confidence 7668889999999 999999998643 2233444444 66777777643 25678889999999999766567788
Q ss_pred ecCChhhHHHHHHHHhcCCCceEEEE
Q 020928 292 FGFTQKEIEDAFEISAQGGNAIKVMF 317 (319)
Q Consensus 292 ~~~~~~~~~~a~~~~~~~~~~gkvvi 317 (319)
+++ +++++|++.+++++. .|+++
T Consensus 342 ~~l--~~~~~a~~~~~~~~~-~~~~~ 364 (365)
T cd05279 342 LPF--EEINDGFDLMRSGES-IRTIL 364 (365)
T ss_pred ecH--HHHHHHHHHHhCCCc-eeeee
Confidence 888 999999999887754 46665
No 41
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=6.8e-39 Score=284.36 Aligned_cols=301 Identities=22% Similarity=0.379 Sum_probs=251.4
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcc-CccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~ 79 (319)
|||.++|+|++|++.+.|.... ..+|.++|||++|+|+++|+++++|++||+|++.+ ...|+.|.+|..|+++.|.
T Consensus 30 v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~ 106 (333)
T cd08296 30 IKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCE 106 (333)
T ss_pred EEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCC
Confidence 5889999999999988774311 25688999999999999999999999999998754 3579999999999999999
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 158 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~ 158 (319)
...+.+. ...|+++||+.++...++++|+++++++++.++ .+.++|++++..+++++++|||+|+|++|++++++|+.
T Consensus 107 ~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~~~vlV~g~g~iG~~~~~~a~~ 185 (333)
T cd08296 107 NGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAK 185 (333)
T ss_pred CCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHH
Confidence 8765433 346999999999999999999999999988774 67889999877789999999999999999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
+|+ .++++++++++.++++++|+++++++.. .++...+..+ .++|++||+.|....+...+++++++|+++.
T Consensus 186 ~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~-----~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~ 257 (333)
T cd08296 186 MGF-RTVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL-----GGAKLILATAPNAKAISALVGGLAPRGKLLI 257 (333)
T ss_pred CCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc-----CCCCEEEECCCchHHHHHHHHHcccCCEEEE
Confidence 999 6888888999999999999988876532 3444444332 3699999999766688999999999999999
Q ss_pred ecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEE
Q 020928 239 IGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 317 (319)
Q Consensus 239 ~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 317 (319)
+|......+++...++.+++++.+.... ...+..++++++++.++ +.+ .+|++ +++.+|++.+.+++.+||+|+
T Consensus 258 ~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~--~~v-~~~~~--~~~~~a~~~~~~~~~~gk~v~ 332 (333)
T cd08296 258 LGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVR--PMV-ETFPL--EKANEAYDRMMSGKARFRVVL 332 (333)
T ss_pred EecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCC--ceE-EEEEH--HHHHHHHHHHHCCCCceeEEe
Confidence 9875544445555567889999988654 45678888999888874 444 57888 999999999999999999998
Q ss_pred e
Q 020928 318 N 318 (319)
Q Consensus 318 ~ 318 (319)
+
T Consensus 333 ~ 333 (333)
T cd08296 333 T 333 (333)
T ss_pred C
Confidence 5
No 42
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1e-38 Score=284.09 Aligned_cols=306 Identities=27% Similarity=0.455 Sum_probs=255.0
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+....|......+..+|.++|+|++|+|+++|+++.+|++||+|++.+..+|+.|..|..|..++|+.
T Consensus 30 v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 109 (340)
T cd05284 30 VRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCEN 109 (340)
T ss_pred EEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCC
Confidence 58899999999999887754332345668999999999999999999999999999999888999999999999999998
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh--cCCCCCCeEEEECCCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR--ANVGPETNVMIMGSGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~--~~~~~~~~vlI~G~g~vG~~ai~la~ 157 (319)
..+.+. +..|+|++|+.++.+.++++|+++++++++.++ .+.+||+++.. .+++++++|||+|+|.+|++++|+|+
T Consensus 110 ~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~ 188 (340)
T cd05284 110 ARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILR 188 (340)
T ss_pred CcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHH
Confidence 877765 568999999999999999999999999999885 67899999865 46889999999998889999999999
Q ss_pred HcC-CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEE
Q 020928 158 AFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV 236 (319)
Q Consensus 158 ~~g-~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~ 236 (319)
..| . .|+++++++++.+.++++|+++++++.. . +...+.++. .+.++|+++|++|+.......+++|+++|++
T Consensus 189 ~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i~~~~--~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~ 262 (340)
T cd05284 189 ALTPA-TVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEVRELT--GGRGADAVIDFVGSDETLALAAKLLAKGGRY 262 (340)
T ss_pred HhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhhcCCEE
Confidence 999 6 6777888899999999999988877532 2 555555443 2457999999999866889999999999999
Q ss_pred EEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEE
Q 020928 237 CLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 315 (319)
Q Consensus 237 v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 315 (319)
+.+|.... ..+.......+++.+.+.... .+.+++++++++++.+.+ ..++|++ +++++|++.+++++..||+
T Consensus 263 i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~---~~~~~~~--~~~~~a~~~~~~~~~~gkv 336 (340)
T cd05284 263 VIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKV---EITKFPL--EDANEALDRLREGRVTGRA 336 (340)
T ss_pred EEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCc---ceEEEeH--HHHHHHHHHHHcCCccceE
Confidence 99986543 233333445678888876543 557888999999998853 3356888 9999999999999899999
Q ss_pred EEeC
Q 020928 316 MFNL 319 (319)
Q Consensus 316 vi~~ 319 (319)
++.+
T Consensus 337 v~~~ 340 (340)
T cd05284 337 VLVP 340 (340)
T ss_pred EecC
Confidence 9863
No 43
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=1.3e-38 Score=283.52 Aligned_cols=309 Identities=32% Similarity=0.570 Sum_probs=251.1
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||++++++|++|++++.+.........+|.++|||++|+|+++|+++++|++||+|++.+..+|+.|++|..+.+++|+.
T Consensus 30 V~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 109 (341)
T PRK05396 30 IKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRN 109 (341)
T ss_pred EEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCC
Confidence 68999999999999876532111122467899999999999999999999999999999888999999999999999987
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 160 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g 160 (319)
..+.+ .+.+|+|+||+.++.+.++++|+++++++++.+.++.++++++.. ...++++|+|.|+|++|++++|+|+.+|
T Consensus 110 ~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~vlV~~~g~vg~~~~~la~~~G 187 (341)
T PRK05396 110 TKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALS-FDLVGEDVLITGAGPIGIMAAAVAKHVG 187 (341)
T ss_pred cceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHHHHHHc-CCCCCCeEEEECCCHHHHHHHHHHHHcC
Confidence 54433 345799999999999999999999999998877777777766533 3468999999989999999999999999
Q ss_pred CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 161 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 161 ~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
+++|+++++++++.++++++|++.++++.. .++...+.++. .+.++|++|||.|+...++.++++++++|+++.+|
T Consensus 188 ~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~~~--~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 263 (341)
T PRK05396 188 ARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAELG--MTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLG 263 (341)
T ss_pred CCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEe
Confidence 966788888999999999999998877543 34555555443 35689999999998778899999999999999998
Q ss_pred ccCCcccccchHHHhcCcEEEEeecc--CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEEe
Q 020928 241 LAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 318 (319)
.......+....+.++++++.++... .+.+..+++++.++ +.+.+.+.+++++ +++++|++.+.++. .||++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l--~~~~~a~~~~~~~~-~gk~vv~ 339 (341)
T PRK05396 264 IPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPIITHRFPI--DDFQKGFEAMRSGQ-SGKVILD 339 (341)
T ss_pred cCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHheEEEEeH--HHHHHHHHHHhcCC-CceEEEe
Confidence 65444444456677888888876532 34566788899888 4345556788888 99999999998876 7999986
Q ss_pred C
Q 020928 319 L 319 (319)
Q Consensus 319 ~ 319 (319)
+
T Consensus 340 ~ 340 (341)
T PRK05396 340 W 340 (341)
T ss_pred c
Confidence 4
No 44
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.4e-38 Score=285.92 Aligned_cols=310 Identities=31% Similarity=0.495 Sum_probs=251.1
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++++|++|+....|.... .++|.++|||++|+|+++|+++++|++||+|++.+..+|++|.+|..+.+.+|+.
T Consensus 30 i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~ 106 (386)
T cd08283 30 VRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDN 106 (386)
T ss_pred EEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCC
Confidence 6899999999999999875422 2468999999999999999999999999999998888899999999999999986
Q ss_pred cccc---------------cC----CCCCCcceeEEeecCC--ceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCC
Q 020928 81 MRFF---------------GS----PPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPET 138 (319)
Q Consensus 81 ~~~~---------------~~----~~~~g~~~e~~~~~~~--~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~ 138 (319)
.... +. ....|+|+||+.++.+ .++++|+++++++|+.++ .+.+||++++.+++++++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~ 186 (386)
T cd08283 107 TNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGD 186 (386)
T ss_pred cccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHHhhccCCCCC
Confidence 4321 10 1236999999999988 899999999999999875 788999999778899999
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
+|||+|+|++|++++++|+..|+.+++++++++++.+++++++...++++... .++...+..+. .+.++|++||++|
T Consensus 187 ~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~-~~~~~~l~~~~--~~~~~D~vld~vg 263 (386)
T cd08283 187 TVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEV-DDVVEALRELT--GGRGPDVCIDAVG 263 (386)
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcc-hHHHHHHHHHc--CCCCCCEEEECCC
Confidence 99999999999999999999998668999999999999999854455554321 13555555443 3457999999997
Q ss_pred Ch---------------------HHHHHHHHhhcCCCEEEEecccCCc-ccccchHHHhcCcEEEEeecc-CCCHHHHHH
Q 020928 219 FD---------------------KTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIE 275 (319)
Q Consensus 219 ~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 275 (319)
+. ..+..++++++++|+++.+|..... ..+.......+++.+.+.... .+.++++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 343 (386)
T cd08283 264 MEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLE 343 (386)
T ss_pred CcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccCHHHHHhCCcEEEeccCCchHHHHHHHH
Confidence 53 3678899999999999999864432 223333456778888876544 556888999
Q ss_pred HHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCC-CceEEEEe
Q 020928 276 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVMFN 318 (319)
Q Consensus 276 ~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvi~ 318 (319)
+++++++...++..+.+++ +++++|++.+.++. ..+|++++
T Consensus 344 ~l~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 344 LIESGELDPSFIITHRLPL--EDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred HHHcCCCChhHceEEEecH--HHHHHHHHHHHhCCCCeEEEEec
Confidence 9999999765556677888 99999999998875 56899986
No 45
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.9e-38 Score=287.59 Aligned_cols=309 Identities=21% Similarity=0.236 Sum_probs=251.2
Q ss_pred CCcceEeeccCCcccccccccccc------c-cCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANF------I-VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAG 73 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~------~-~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~ 73 (319)
|||.++|+|++|++...+.....+ . ...+.++|||++|+|+++|++++.|++||+|++.+..+|+.|..|..|
T Consensus 47 I~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~ 126 (393)
T cd08246 47 VAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGG 126 (393)
T ss_pred EEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccc
Confidence 588999999999988766421111 0 112358999999999999999999999999999988899999999999
Q ss_pred CCCCCCCcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHHh---cCCCCCCeEEEECC-CHH
Q 020928 74 SYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR---ANVGPETNVMIMGS-GPI 148 (319)
Q Consensus 74 ~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~---~~~~~~~~vlI~G~-g~v 148 (319)
.+++|+...+++.....|+|+||+.++...++++|+++++++++.+ .++.+||+++.. ++++++++|+|+|+ |++
T Consensus 127 ~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~i 206 (393)
T cd08246 127 DPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGL 206 (393)
T ss_pred ccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHH
Confidence 9999998777776667899999999999999999999999998876 478899999843 68999999999985 999
Q ss_pred HHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCC--------------------cchhHHHHHhhhhcCC
Q 020928 149 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI--------------------EDVDTDVGKIQNAMGS 208 (319)
Q Consensus 149 G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~--------------------~~~~~~i~~~~~~~~~ 208 (319)
|++++++|+.+|+ .++++++++++.++++++|++.++++...+ ..+...+.++. .+.
T Consensus 207 G~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~ 283 (393)
T cd08246 207 GSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGR 283 (393)
T ss_pred HHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHh--CCC
Confidence 9999999999999 566778899999999999999888753211 01333344333 344
Q ss_pred -CccEEEEccCChHHHHHHHHhhcCCCEEEEecccCC-cccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCC
Q 020928 209 -GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK 285 (319)
Q Consensus 209 -~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~ 285 (319)
++|++||++|+. .+...+++++++|+++.+|.... ...+....+..++.++.+.+.. .+.+.+++++++++.+.
T Consensus 284 ~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~-- 360 (393)
T cd08246 284 EDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRID-- 360 (393)
T ss_pred CCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCce--
Confidence 799999999974 78889999999999999985432 2234455566778888887654 34688899999999884
Q ss_pred CceeeeecCChhhHHHHHHHHhcC-CCceEEEE
Q 020928 286 PLITHRFGFTQKEIEDAFEISAQG-GNAIKVMF 317 (319)
Q Consensus 286 ~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi 317 (319)
+...++|++ +++++|++.+.++ ...||+++
T Consensus 361 ~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 361 PCLSKVFSL--DETPDAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred eeeeEEEeH--HHHHHHHHHHHhCccccceEEE
Confidence 446788888 9999999999988 78899986
No 46
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=2.7e-38 Score=285.45 Aligned_cols=311 Identities=27% Similarity=0.480 Sum_probs=250.7
Q ss_pred CCcceEeeccCCcccccccccc----ccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCA----NFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN 76 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~----~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~ 76 (319)
|||.++|+|++|++.+.+...+ ....++|.++|||++|+|+++|+++.+|++||+|++.+..+|+.|+.|..|.+.
T Consensus 56 V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~ 135 (384)
T cd08265 56 IRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPN 135 (384)
T ss_pred EEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcc
Confidence 6899999999999887642111 112356899999999999999999999999999999988999999999999999
Q ss_pred CCCCcccccCCCCCCcceeEEeecCCceEeCCCC-------CChhhhhccchhHHHHHHHH-h-cCCCCCCeEEEECCCH
Q 020928 77 LCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN-------VSLEEGAMCEPLSVGVHACR-R-ANVGPETNVMIMGSGP 147 (319)
Q Consensus 77 ~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~-------~~~~~aa~~~~~~~a~~~l~-~-~~~~~~~~vlI~G~g~ 147 (319)
+|+.+...+. ...|+|++|+.+++..++++|++ ++++.|+...++++||+++. . ++++++++|+|+|+|+
T Consensus 136 ~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~ 214 (384)
T cd08265 136 HCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGP 214 (384)
T ss_pred cCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCH
Confidence 9987665543 24799999999999999999986 45665666678899999983 4 6899999999999999
Q ss_pred HHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCC-CcchhHHHHHhhhhcCCCccEEEEccCCh-HHHHH
Q 020928 148 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-IEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMST 225 (319)
Q Consensus 148 vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~i~~~~~~~~~~~d~v~d~~g~~-~~~~~ 225 (319)
+|++++|+|+..|++.|+++++++++.++++++|++.++++... ..++...+.++. .+.++|+|+|+.|++ .....
T Consensus 215 vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~--~g~gvDvvld~~g~~~~~~~~ 292 (384)
T cd08265 215 IGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVT--KGWGADIQVEAAGAPPATIPQ 292 (384)
T ss_pred HHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhc--CCCCCCEEEECCCCcHHHHHH
Confidence 99999999999998778888888889999999999888765432 224555555554 356899999999963 46788
Q ss_pred HHHhhcCCCEEEEecccCCcccccchHHHhcCcEEEEeecc--CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHH
Q 020928 226 ALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 303 (319)
Q Consensus 226 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~ 303 (319)
.+++|+++|+++.+|.......+....+..+..++.+.... ...+.+++++++++.+.+.....++|++ +++++|+
T Consensus 293 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~--~~~~~a~ 370 (384)
T cd08265 293 MEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPL--EGIMEAI 370 (384)
T ss_pred HHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeH--HHHHHHH
Confidence 99999999999999864333333445566677788777543 4568999999999999654456678888 9999999
Q ss_pred HHHhcCCCceEEEE
Q 020928 304 EISAQGGNAIKVMF 317 (319)
Q Consensus 304 ~~~~~~~~~gkvvi 317 (319)
+.+.+. ..+|+++
T Consensus 371 ~~~~~~-~~~kvvv 383 (384)
T cd08265 371 KAASER-TDGKITI 383 (384)
T ss_pred HHHhcC-CCceEEe
Confidence 997665 6788885
No 47
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.2e-38 Score=279.72 Aligned_cols=302 Identities=27% Similarity=0.476 Sum_probs=242.7
Q ss_pred CCcceEeeccCCccccccccc--------cccccCCCcccccceeEEEEEeCCCCCC-CCCCCEEEEccCccCCCCcccc
Q 020928 1 MPKAVTAYCMQNVVYDQTMRC--------ANFIVKKPMVIGHECAGIIEEVGSEVKS-LEVGDRVALEPGISCGHCSLCK 71 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~--------~~~~~~~p~i~G~e~~G~V~~~G~~v~~-~~~Gd~V~~~~~~~~~~~~~~~ 71 (319)
|||.++++|+.|+....|... ......+|.++|+|++|+|+++|+++++ |++||+|++.+..+|+.|+.|.
T Consensus 28 V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~ 107 (341)
T cd08262 28 VKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCG 107 (341)
T ss_pred EEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhh
Confidence 689999999999999887321 0112346889999999999999999997 9999999999999999999995
Q ss_pred CCCCCCCCCcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHH
Q 020928 72 AGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLV 151 (319)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ 151 (319)
.|.. ....|+|+||+.++.+.++++|+++++++++...++.+||+++..++++++++|||+|+|++|.+
T Consensus 108 ~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~~a~~~~~~~~~~~g~~VlI~g~g~vg~~ 176 (341)
T cd08262 108 IGLS-----------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAVGLHAVRRARLTPGEVALVIGCGPIGLA 176 (341)
T ss_pred CCCC-----------cCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHH
Confidence 4321 12469999999999999999999999998886568889999887799999999999999999999
Q ss_pred HHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCc--chhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHh
Q 020928 152 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE--DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 229 (319)
Q Consensus 152 ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~--~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~ 229 (319)
++|+|+.+|++.++++++++++.++++++|++.++++..... .+. .+... ..+.++|++||++|+.......+++
T Consensus 177 ~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~~--~~~~~~d~vid~~g~~~~~~~~~~~ 253 (341)
T cd08262 177 VIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELAR--AGGPKPAVIFECVGAPGLIQQIIEG 253 (341)
T ss_pred HHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHHH--hCCCCCCEEEECCCCHHHHHHHHHH
Confidence 999999999977888888999999999999988877543211 111 12222 2356799999999985577889999
Q ss_pred hcCCCEEEEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhc
Q 020928 230 TRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ 308 (319)
Q Consensus 230 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 308 (319)
++++|+++.+|.......+.......+++++.++... .+.+.++++++++|.+.+.+.+.+++++ ++++++++.+++
T Consensus 254 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~a~~~~~~ 331 (341)
T cd08262 254 APPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAPMVTGTVGL--DGVPDAFEALRD 331 (341)
T ss_pred hccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHHheEEEeeH--HHHHHHHHHHhc
Confidence 9999999999865332222222334577777765544 4468889999999999766666788888 999999999999
Q ss_pred CCCceEEEEe
Q 020928 309 GGNAIKVMFN 318 (319)
Q Consensus 309 ~~~~gkvvi~ 318 (319)
+...+|+|++
T Consensus 332 ~~~~~kvvv~ 341 (341)
T cd08262 332 PEHHCKILVD 341 (341)
T ss_pred CCCceEEEeC
Confidence 9999999974
No 48
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=4.8e-38 Score=282.05 Aligned_cols=304 Identities=28% Similarity=0.449 Sum_probs=247.2
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|++...+.. +...|.++|||++|+|+++|+++.+|++||+|++.+. +|++|.+|..+++++|..
T Consensus 32 Vkv~a~gi~~~d~~~~~g~~----~~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~ 106 (365)
T cd08278 32 VRIVATGICHTDLVVRDGGL----PTPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCEN 106 (365)
T ss_pred EEEEEeecCcccHHHhcCCC----CCCCCcccccceeEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccC
Confidence 68999999999999988743 2356889999999999999999999999999998764 899999999999999976
Q ss_pred cccccC----------------------CCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCC
Q 020928 81 MRFFGS----------------------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGP 136 (319)
Q Consensus 81 ~~~~~~----------------------~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~ 136 (319)
...... ....|+|+||+.+++..++++|+++++++++.+. .+.+|++++ +.+++++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~ 186 (365)
T cd08278 107 FFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRP 186 (365)
T ss_pred cccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCC
Confidence 432210 1125899999999999999999999999988775 678888887 4588999
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEc
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 216 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~ 216 (319)
+++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.++++. ..++.+.+.++. +.++|+++||
T Consensus 187 g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~--~~~~~~~v~~~~---~~~~d~vld~ 261 (365)
T cd08278 187 GSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPK--EEDLVAAIREIT---GGGVDYALDT 261 (365)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHHHh---CCCCcEEEEC
Confidence 99999999999999999999999997799999999999999999998887653 335555555443 5679999999
Q ss_pred cCChHHHHHHHHhhcCCCEEEEecccC--CcccccchHHHhcCcEEEEeecc----CCCHHHHHHHHHcCCCCCCCceee
Q 020928 217 VGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPAAAREVDVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITH 290 (319)
Q Consensus 217 ~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~ 290 (319)
+|++..+..++++++++|+++.+|... ....+....+..+++.+.++... .+.++++++++.++++.+.+.. .
T Consensus 262 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~ 340 (365)
T cd08278 262 TGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-T 340 (365)
T ss_pred CCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-E
Confidence 997668899999999999999998642 22344455555778888776532 3457889999999998433333 5
Q ss_pred eecCChhhHHHHHHHHhcCCCceEEEEe
Q 020928 291 RFGFTQKEIEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 291 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 318 (319)
.+++ +++++|++.++++.. .|++++
T Consensus 341 ~~~l--~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 341 FYPF--EDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred EecH--HHHHHHHHHHHCCCc-eEEEEC
Confidence 6788 999999999988754 588874
No 49
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=8.4e-38 Score=278.79 Aligned_cols=310 Identities=30% Similarity=0.524 Sum_probs=254.1
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+..+.|.... .++|.++|||++|+|+++|++++++++||+|++.+...|+.|++|..+.+..|..
T Consensus 30 v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 106 (345)
T cd08286 30 VKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCES 106 (345)
T ss_pred EEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCC
Confidence 5899999999999998875422 2458899999999999999999999999999998888999999999999998887
Q ss_pred cccccCCCCCCcceeEEeecCC--ceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCCeEEEECCCHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAA 156 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~--~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la 156 (319)
..++.+....|+|+||+.++.+ .++++|++++.++++.+. .+.+||+++ ...++++++++||.|+|++|++++|+|
T Consensus 107 ~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a 186 (345)
T cd08286 107 GGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTA 186 (345)
T ss_pred cccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 6554333356999999999987 899999999999998774 678899875 458899999999999999999999999
Q ss_pred HHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEE
Q 020928 157 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV 236 (319)
Q Consensus 157 ~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~ 236 (319)
+.+|...++++++++++.++++++|++.++++.. .++...+.++. .+.++|++||++|+...+..++++|+++|++
T Consensus 187 ~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~ 262 (345)
T cd08286 187 QLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELT--DGRGVDVVIEAVGIPATFELCQELVAPGGHI 262 (345)
T ss_pred HHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHhccCCcEE
Confidence 9999447888888999999999999988877542 34555555443 3567999999999876888999999999999
Q ss_pred EEecccCCcccccchHHHhcCcEEEEeeccCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCC--CceE
Q 020928 237 CLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG--NAIK 314 (319)
Q Consensus 237 v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~gk 314 (319)
+.+|.......+....+..+++.+.+.....+.+.+++++++++.+.+.+...+++++ ++++++++.+++.. ...|
T Consensus 263 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~~k 340 (345)
T cd08286 263 ANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKLVTHRFKL--SEIEKAYDTFSAAAKHKALK 340 (345)
T ss_pred EEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHcEEeEeeH--HHHHHHHHHHhccCCCCeeE
Confidence 9998654434444455566788887754433568889999999998665556788888 99999999998763 4569
Q ss_pred EEEeC
Q 020928 315 VMFNL 319 (319)
Q Consensus 315 vvi~~ 319 (319)
++|++
T Consensus 341 ~~~~~ 345 (345)
T cd08286 341 VIIDF 345 (345)
T ss_pred EEEeC
Confidence 99874
No 50
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=5.7e-38 Score=280.11 Aligned_cols=309 Identities=29% Similarity=0.493 Sum_probs=250.1
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|++.+.|.... .++|.++|+|++|+|+++|+++++|++||+|++.+..+|+.|.+|.+|...+|+.
T Consensus 30 i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 106 (347)
T cd05278 30 VRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCEN 106 (347)
T ss_pred EEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcC
Confidence 6899999999999988775422 3568999999999999999999999999999998888999999999999999987
Q ss_pred cccc--cCCCCCCcceeEEeecCC--ceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHH
Q 020928 81 MRFF--GSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 155 (319)
Q Consensus 81 ~~~~--~~~~~~g~~~e~~~~~~~--~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~l 155 (319)
..+. ......|+|+||+.++.+ .++++|+++++++|+.++ .+.+||+++...+++++++|||.|+|++|++++|+
T Consensus 107 ~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~~~VlI~g~g~vg~~~iql 186 (347)
T cd05278 107 GLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAG 186 (347)
T ss_pred CCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehhhhcCCCCCCEEEEECCCHHHHHHHHH
Confidence 5532 122347999999999987 899999999999999875 78999999877889999999998889999999999
Q ss_pred HHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCE
Q 020928 156 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK 235 (319)
Q Consensus 156 a~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~ 235 (319)
|+..|...++++++++++.++++++|++.++++.. .++...+.++. .+.++|++||++++...+...+++|+++|+
T Consensus 187 ak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~ 262 (347)
T cd05278 187 ARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQILELT--GGRGVDCVIEAVGFEETFEQAVKVVRPGGT 262 (347)
T ss_pred HHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHHHHHHc--CCCCCcEEEEccCCHHHHHHHHHHhhcCCE
Confidence 99999756788888888999999999888877543 34555555443 346799999999985588999999999999
Q ss_pred EEEecccCCcccc-cchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCC-c
Q 020928 236 VCLIGLAKTEMTV-ALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-A 312 (319)
Q Consensus 236 ~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~ 312 (319)
++.+|........ .......+++.+.+.... .+.++++++++.++.+.+.+.....+++ ++++++++.+.+++. .
T Consensus 263 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~ 340 (347)
T cd05278 263 IANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITHRFPL--DDILKAYRLFDNKPDGC 340 (347)
T ss_pred EEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChhHcEEEEecH--HHHHHHHHHHhcCCCCc
Confidence 9999854322111 111223456666654332 4578889999999998654445677888 999999999988766 7
Q ss_pred eEEEEe
Q 020928 313 IKVMFN 318 (319)
Q Consensus 313 gkvvi~ 318 (319)
+|++++
T Consensus 341 ~~~vv~ 346 (347)
T cd05278 341 IKVVIR 346 (347)
T ss_pred eEEEec
Confidence 899886
No 51
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.4e-37 Score=277.08 Aligned_cols=307 Identities=36% Similarity=0.633 Sum_probs=255.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++++|+.|+.+..+... +...|.++|+|++|+|+.+|+++++|++||+|++.+..+|+.|++|..|+.++|+.
T Consensus 29 i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 105 (343)
T cd08235 29 VKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPN 105 (343)
T ss_pred EEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCC
Confidence 689999999999998876431 23457899999999999999999999999999999888999999999999999988
Q ss_pred cccccCCCCCCcceeEEeecCCc-----eEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKL-----CYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 155 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~-----~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~l 155 (319)
..+++. ...|+|++|+.++.+. ++++|+++++++|+.+.++.+||+++...+++++++|+|+|+|.+|++++|+
T Consensus 106 ~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~VlV~g~g~vg~~~~~l 184 (343)
T cd08235 106 YKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQRKAGIKPGDTVLVIGAGPIGLLHAML 184 (343)
T ss_pred cceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHH
Confidence 665543 3579999999999998 9999999999999877778899999977789999999999989999999999
Q ss_pred HHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCE
Q 020928 156 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK 235 (319)
Q Consensus 156 a~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~ 235 (319)
|+..|++.++++++++++.+.++++|.+.++++. ..++...+.++. .+.++|++||++++.......+++++++|+
T Consensus 185 a~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~g~ 260 (343)
T cd08235 185 AKASGARKVIVSDLNEFRLEFAKKLGADYTIDAA--EEDLVEKVRELT--DGRGADVVIVATGSPEAQAQALELVRKGGR 260 (343)
T ss_pred HHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCC--ccCHHHHHHHHh--CCcCCCEEEECCCChHHHHHHHHHhhcCCE
Confidence 9999995488888889998998899988877653 345555555443 356799999999976688899999999999
Q ss_pred EEEecccCCc--ccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCc
Q 020928 236 VCLIGLAKTE--MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 312 (319)
Q Consensus 236 ~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 312 (319)
++.++..... ..+......++++++.++... .+.++.++++++++.+.+.+.+..++++ +++.++++.+.+++ .
T Consensus 261 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~-~ 337 (343)
T cd08235 261 ILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDVKDLITHRFPL--EDIEEAFELAADGK-S 337 (343)
T ss_pred EEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCChHHheeeEeeH--HHHHHHHHHHhCCC-c
Confidence 9998853221 233345567788888776554 5568889999999998654456677888 99999999999998 8
Q ss_pred eEEEEe
Q 020928 313 IKVMFN 318 (319)
Q Consensus 313 gkvvi~ 318 (319)
+|+|++
T Consensus 338 ~k~vi~ 343 (343)
T cd08235 338 LKIVIT 343 (343)
T ss_pred EEEEeC
Confidence 999874
No 52
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.1e-37 Score=275.13 Aligned_cols=290 Identities=28% Similarity=0.490 Sum_probs=243.2
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+....|.. ..|.++|||++|+|+++|++ +++||||...+..+|++|.+|..|.+.+|..
T Consensus 29 V~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~ 99 (319)
T cd08242 29 VRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPN 99 (319)
T ss_pred EEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCC
Confidence 68999999999999987643 36889999999999999998 7899999998888999999999999999887
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 160 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g 160 (319)
....+....+|+|++|+.++.+.++++|+++++++++.+.++.++|..++..+++++++|||+|+|.+|++++|+|+.+|
T Consensus 100 ~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G 179 (319)
T cd08242 100 RTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTG 179 (319)
T ss_pred CcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 65544323579999999999999999999999998886556667777777789999999999999999999999999999
Q ss_pred CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 161 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 161 ~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
+ .+++++.++++.++++++|++.++++... ..+.++|++||++|+...+...+++++++|+++..+
T Consensus 180 ~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~ 245 (319)
T cd08242 180 P-DVVLVGRHSEKLALARRLGVETVLPDEAE-------------SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKS 245 (319)
T ss_pred C-eEEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEc
Confidence 9 48888888999999999999887664211 135679999999998667889999999999999876
Q ss_pred ccCCcccccchHHHhcCcEEEEeeccCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEEe
Q 020928 241 LAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 318 (319)
.......+....+.+++.++.+.... .+++++++++++++++.+.+.++|++ +++++|++.+.++. .+|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 246 TYAGPASFDLTKAVVNEITLVGSRCG--PFAPALRLLRKGLVDVDPLITAVYPL--EEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred ccCCCCccCHHHheecceEEEEEecc--cHHHHHHHHHcCCCChhhceEEEEeH--HHHHHHHHHHhcCC-ceEEEeC
Confidence 54433444455566788888876543 38889999999999766667888999 99999999998775 5899986
No 53
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.3e-37 Score=277.55 Aligned_cols=306 Identities=30% Similarity=0.504 Sum_probs=249.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|+.|+....|.. +..+|.++|+|++|+|+++|++++++++||+|++.+..+|+.|.+|.++...+|+.
T Consensus 30 i~v~~~~i~~~d~~~~~g~~----~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 105 (344)
T cd08284 30 VKVTAAAICGSDLHIYRGHI----PSTPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAK 105 (344)
T ss_pred EEEEEeeccccchhhhcCCC----CCCCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCC
Confidence 58899999999998887643 23557899999999999999999999999999998888999999999999999987
Q ss_pred cccc---cCCCCCCcceeEEeecCC--ceEeCCCCCChhhhhcc-chhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHH
Q 020928 81 MRFF---GSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLL 154 (319)
Q Consensus 81 ~~~~---~~~~~~g~~~e~~~~~~~--~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~ 154 (319)
...+ +.....|+|++|+.++.+ .++++|+++++++|+.+ ..+.+||+++...+++++++|||+|+|++|++++|
T Consensus 106 ~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~ 185 (344)
T cd08284 106 GGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVL 185 (344)
T ss_pred CccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhHhcCCccCCEEEEECCcHHHHHHHH
Confidence 6655 223346999999999965 99999999999999877 47899999997788999999999999999999999
Q ss_pred HHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCC
Q 020928 155 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG 234 (319)
Q Consensus 155 la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G 234 (319)
+|+.+|+.+++++++++++.++++++|+.. ++. ...++...+.++. .+.++|++||++|+.......+++++++|
T Consensus 186 ~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~-~~~--~~~~~~~~l~~~~--~~~~~dvvid~~~~~~~~~~~~~~l~~~g 260 (344)
T cd08284 186 SAQVLGAARVFAVDPVPERLERAAALGAEP-INF--EDAEPVERVREAT--EGRGADVVLEAVGGAAALDLAFDLVRPGG 260 (344)
T ss_pred HHHHcCCceEEEEcCCHHHHHHHHHhCCeE-Eec--CCcCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHhcccCC
Confidence 999999756788888889999999999753 332 3345555555543 35689999999998768899999999999
Q ss_pred EEEEecccCC-cccccchHHHhcCcEEEEeec-cCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCc
Q 020928 235 KVCLIGLAKT-EMTVALTPAAAREVDVIGIFR-YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 312 (319)
Q Consensus 235 ~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 312 (319)
+++.+|.... ...........+++.+.+... ..+.++++++++.++.+.+.+.+.+++++ ++++++++.+.++..
T Consensus 261 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~- 337 (344)
T cd08284 261 VISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPL--EEAPEAYRLFDKRKV- 337 (344)
T ss_pred EEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChHHhEeeeecH--HHHHHHHHHHhcCCc-
Confidence 9999986542 222333344567777765432 26678999999999998654456677888 999999999998877
Q ss_pred eEEEEe
Q 020928 313 IKVMFN 318 (319)
Q Consensus 313 gkvvi~ 318 (319)
+|+|++
T Consensus 338 ~k~Vi~ 343 (344)
T cd08284 338 LKVVLD 343 (344)
T ss_pred eEEEec
Confidence 999985
No 54
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.2e-37 Score=279.98 Aligned_cols=308 Identities=31% Similarity=0.507 Sum_probs=254.3
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCC---CCCCCEEEEccCccCCCCccccCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS---LEVGDRVALEPGISCGHCSLCKAGSYNL 77 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 77 (319)
|||.++++|++|+.+..+.. +..+|.++|||++|+|+.+|+++.+ |++||+|++.+..+|+.|.+|..++.++
T Consensus 30 v~v~~~~l~~~d~~~~~~~~----~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 105 (367)
T cd08263 30 IRVAACGVCHSDLHVLKGEL----PFPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENL 105 (367)
T ss_pred EEEEEeeeCcchHHHhcCCC----CCCCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCccc
Confidence 57899999999999887643 3366889999999999999999988 9999999998888999999999999999
Q ss_pred CCCcccccCC---------------------CCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCC
Q 020928 78 CPEMRFFGSP---------------------PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANV 134 (319)
Q Consensus 78 ~~~~~~~~~~---------------------~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~ 134 (319)
|++..++... ...|+|++|+.++...++++|+++++++++.++ .+.+||+++.. ..+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~ 185 (367)
T cd08263 106 CEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADV 185 (367)
T ss_pred CcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccC
Confidence 9976532110 136999999999999999999999999999875 68899999855 778
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEE
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 214 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~ 214 (319)
+++++|||+|+|++|++++++|+..|++.++++++++++.++++++|++.++++. ..++...+.++. .+.++|++|
T Consensus 186 ~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~--~~~~~~~l~~~~--~~~~~d~vl 261 (367)
T cd08263 186 RPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAA--KEDAVAAIREIT--GGRGVDVVV 261 (367)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCC--cccHHHHHHHHh--CCCCCCEEE
Confidence 9999999999999999999999999996688888889999999999998887753 335555555443 356799999
Q ss_pred EccCChHHHHHHHHhhcCCCEEEEecccCC--cccccchHHHhcCcEEEEeecc--CCCHHHHHHHHHcCCCCCCCceee
Q 020928 215 DCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITH 290 (319)
Q Consensus 215 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~ 290 (319)
|++++......++++++++|+++.++.... ...+....+..+++.+.++... .+.+++++++++++.+.+.+...+
T Consensus 262 d~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~ 341 (367)
T cd08263 262 EALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTH 341 (367)
T ss_pred EeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeE
Confidence 999986578889999999999999985432 2233444555678888776433 356888999999999865555667
Q ss_pred eecCChhhHHHHHHHHhcCCCceEEEEe
Q 020928 291 RFGFTQKEIEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 291 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 318 (319)
.+++ +++.++++.++++...||+|++
T Consensus 342 ~~~~--~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 342 KYKL--EEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred EecH--HHHHHHHHHHhcCCccceeeeC
Confidence 7888 9999999999999888999974
No 55
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.5e-37 Score=275.71 Aligned_cols=306 Identities=28% Similarity=0.479 Sum_probs=249.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++++|++|+....|.. +...|.++|||++|+|+++|+++.++++||+|++....+|+.|.+|..|...+|..
T Consensus 30 V~v~~~~i~~~d~~~~~g~~----~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 105 (345)
T cd08287 30 IRVVATCVCGSDLWPYRGVS----PTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVH 105 (345)
T ss_pred EEEeeeeecccchhhhcCCC----CCCCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCC
Confidence 58899999999999887643 23458899999999999999999999999999986667899999999999999987
Q ss_pred cccccCCCCCCcceeEEeecCC--ceEeCCCCCChhhhhcc------chhHHHHHHHHhcCCCCCCeEEEECCCHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC------EPLSVGVHACRRANVGPETNVMIMGSGPIGLVT 152 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~--~~~~iP~~~~~~~aa~~------~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~a 152 (319)
..+++ ...+|+|+||+.++.+ .++++|++++++.+... ..+.+|+++++.++++++++|+|.|+|++|+++
T Consensus 106 ~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~ 184 (345)
T cd08287 106 GGFWG-AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCA 184 (345)
T ss_pred CCccc-CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHH
Confidence 66554 3567999999999975 99999999988322211 457788998877899999999999999999999
Q ss_pred HHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcC
Q 020928 153 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP 232 (319)
Q Consensus 153 i~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~ 232 (319)
+|+|+..|+++++++++++++.++++++|++.++++.. .++.+.+.++. .+.++|++||++|++..+..+++++++
T Consensus 185 ~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~~~~i~~~~--~~~~~d~il~~~g~~~~~~~~~~~l~~ 260 (345)
T cd08287 185 VLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEAVARVRELT--GGVGADAVLECVGTQESMEQAIAIARP 260 (345)
T ss_pred HHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccHHHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHhhcc
Confidence 99999999977888888888999999999988887543 34445555443 356799999999987788999999999
Q ss_pred CCEEEEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCC
Q 020928 233 GGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 311 (319)
Q Consensus 233 ~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 311 (319)
+|+++.++.......+.......+++.+.+.... .+.++++++++.++.+++.+.+.+++++ +++++|++.+.+...
T Consensus 261 ~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~ 338 (345)
T cd08287 261 GGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGRINPGRVFDLTLPL--DEVAEGYRAMDERRA 338 (345)
T ss_pred CCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCCCCHHHhEEeeecH--HHHHHHHHHHhCCCc
Confidence 9999998865433334443456788888776543 5678899999999998655556677888 999999999887654
Q ss_pred ceEEEEe
Q 020928 312 AIKVMFN 318 (319)
Q Consensus 312 ~gkvvi~ 318 (319)
.|++|+
T Consensus 339 -~k~~~~ 344 (345)
T cd08287 339 -IKVLLR 344 (345)
T ss_pred -eEEEeC
Confidence 499986
No 56
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.4e-37 Score=276.39 Aligned_cols=309 Identities=26% Similarity=0.397 Sum_probs=253.3
Q ss_pred CCcceEeeccCCcccccccccc---------ccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCcccc
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCA---------NFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCK 71 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~---------~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~ 71 (319)
|||.++|+|++|++...+.... ....++|.++|+|++|+|+++|++++++++||+|++.+...|+.|..|.
T Consensus 30 V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~ 109 (350)
T cd08240 30 VKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCL 109 (350)
T ss_pred EEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHH
Confidence 6899999999999988763210 0022457899999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEECCCHHH
Q 020928 72 AGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGSGPIG 149 (319)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG 149 (319)
++.+++|....+.+. ...|++++|+.++.+.++++|+++++++++.+. .+.+||++++. ..++++++|+|+|+|++|
T Consensus 110 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg 188 (350)
T cd08240 110 AGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLG 188 (350)
T ss_pred CcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHH
Confidence 999999987655443 257999999999999999999999999998774 77899999866 455689999999999999
Q ss_pred HHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHh
Q 020928 150 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 229 (319)
Q Consensus 150 ~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~ 229 (319)
++++|+|+..|++.|+++++++++.+.++++|++.+++. ...++...+.+.. ++++|++||++|.......++++
T Consensus 189 ~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~---~~~~d~vid~~g~~~~~~~~~~~ 263 (350)
T cd08240 189 LMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG--SDPDAAKRIIKAA---GGGVDAVIDFVNNSATASLAFDI 263 (350)
T ss_pred HHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC--CCccHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHH
Confidence 999999999999778888889999999999998877653 3334444444433 23799999999976688999999
Q ss_pred hcCCCEEEEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhc
Q 020928 230 TRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ 308 (319)
Q Consensus 230 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 308 (319)
|+++|+++.+|..............++++.+.+.... .+++.+++++++++.+.. .....+++ ++++++++.+.+
T Consensus 264 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~~i~~--~~~~~~~~--~~~~~a~~~~~~ 339 (350)
T cd08240 264 LAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAGKLKP--IPLTERPL--SDVNDALDDLKA 339 (350)
T ss_pred hhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHcCCCcc--ceeeEEcH--HHHHHHHHHHHc
Confidence 9999999999865443333444456688888887655 457888999999999853 34567888 999999999999
Q ss_pred CCCceEEEEeC
Q 020928 309 GGNAIKVMFNL 319 (319)
Q Consensus 309 ~~~~gkvvi~~ 319 (319)
++..||+++++
T Consensus 340 ~~~~gkvvv~~ 350 (350)
T cd08240 340 GKVVGRAVLKP 350 (350)
T ss_pred CCccceEEecC
Confidence 98899999863
No 57
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.9e-37 Score=275.52 Aligned_cols=300 Identities=25% Similarity=0.380 Sum_probs=248.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEE-EccCccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVA-LEPGISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~-~~~~~~~~~~~~~~~~~~~~~~ 79 (319)
|||.++++|++|++.+.+... ..++|.++|||++|+|+++|+++++|++||+|+ .....+|++|.+|..|.+++|+
T Consensus 29 irv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 105 (337)
T cd05283 29 IKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCP 105 (337)
T ss_pred EEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCc
Confidence 689999999999999887541 235689999999999999999999999999997 4445589999999999999998
Q ss_pred Cccccc------CCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHH
Q 020928 80 EMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVT 152 (319)
Q Consensus 80 ~~~~~~------~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~a 152 (319)
+..+.. .....|+|+||+.++.+.++++|+++++++++.+. ...+||++++...++++++++|.|+|++|+++
T Consensus 106 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~ 185 (337)
T cd05283 106 KGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVGPGKRVGVVGIGGLGHLA 185 (337)
T ss_pred chhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEECCcHHHHHH
Confidence 865432 12347999999999999999999999999998775 67889999887779999999999899999999
Q ss_pred HHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcC
Q 020928 153 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP 232 (319)
Q Consensus 153 i~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~ 232 (319)
+++|+..|+ +++++++++++.++++++|++.+++... .++. .. .+.++|++||++|+......+++++++
T Consensus 186 ~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~---~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~ 255 (337)
T cd05283 186 VKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEAM---KK----AAGSLDLIIDTVSASHDLDPYLSLLKP 255 (337)
T ss_pred HHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhhh---hh----ccCCceEEEECCCCcchHHHHHHHhcC
Confidence 999999999 7888888889999999999888776422 1211 11 246799999999987458889999999
Q ss_pred CCEEEEecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCC
Q 020928 233 GGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 311 (319)
Q Consensus 233 ~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 311 (319)
+|+++.+|.......++...+..+++.+.+.... .+.++.+++++++++++ +.. +++++ +++++|++.+++++.
T Consensus 256 ~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~--~~~-~~~~~--~~~~~a~~~~~~~~~ 330 (337)
T cd05283 256 GGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIK--PWV-EVIPM--DGINEALERLEKGDV 330 (337)
T ss_pred CCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCc--cce-EEEEH--HHHHHHHHHHHcCCC
Confidence 9999999865443344555566789999887664 45688899999999984 333 67888 999999999999999
Q ss_pred ceEEEEe
Q 020928 312 AIKVMFN 318 (319)
Q Consensus 312 ~gkvvi~ 318 (319)
.||+|++
T Consensus 331 ~~k~v~~ 337 (337)
T cd05283 331 RYRFVLD 337 (337)
T ss_pred cceEeeC
Confidence 9999874
No 58
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=5.1e-37 Score=273.14 Aligned_cols=310 Identities=34% Similarity=0.597 Sum_probs=250.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|+.|+.++++........++|.++|+|++|+|+++|+++++|++||+|++.+...|+.|..|..+.+++|+.
T Consensus 28 V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 107 (340)
T TIGR00692 28 IKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQN 107 (340)
T ss_pred EEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcC
Confidence 58899999999999876532111123457789999999999999999999999999999888999999999999999988
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 160 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g 160 (319)
..+++ .+..|+|++|+.++++.++++|+++++++|+...++.+|++++ ....+++++++|.|+|++|++++|+|+.+|
T Consensus 108 ~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vlI~~~g~vg~~a~~la~~~G 185 (340)
T TIGR00692 108 TKIFG-VDTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPISGKSVLVTGAGPIGLMAIAVAKASG 185 (340)
T ss_pred cceEe-ecCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 65543 2357999999999999999999999998777667888888876 445789999999888999999999999999
Q ss_pred CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 161 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 161 ~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
.+.|+++++++++.++++++|++.++++. ..++.+.+.++. .+.++|++||++|+.......+++|+++|+++.+|
T Consensus 186 ~~~v~~~~~~~~~~~~~~~~g~~~~v~~~--~~~~~~~l~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g 261 (340)
T TIGR00692 186 AYPVIVSDPNEYRLELAKKMGATYVVNPF--KEDVVKEVADLT--DGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLG 261 (340)
T ss_pred CcEEEEECCCHHHHHHHHHhCCcEEEccc--ccCHHHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEc
Confidence 86577888889999999999998877653 245555555543 35679999999997768889999999999999998
Q ss_pred ccCCcccccch-HHHhcCcEEEEeecc--CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEE
Q 020928 241 LAKTEMTVALT-PAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 317 (319)
Q Consensus 241 ~~~~~~~~~~~-~~~~~~~~i~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 317 (319)
.......+... .+.++++.+.+.... .+.+.+++++++++++++.+.+.+.+++ ++++++++.++++. .||+|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~gkvvv 338 (340)
T TIGR00692 262 LPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKF--DKFEKGFELMRSGQ-TGKVIL 338 (340)
T ss_pred cCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeH--HHHHHHHHHHhcCC-CceEEE
Confidence 65332233333 466777777765422 3457889999999999655556777888 99999999998886 499998
Q ss_pred eC
Q 020928 318 NL 319 (319)
Q Consensus 318 ~~ 319 (319)
++
T Consensus 339 ~~ 340 (340)
T TIGR00692 339 SL 340 (340)
T ss_pred eC
Confidence 75
No 59
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=5.9e-37 Score=272.87 Aligned_cols=308 Identities=33% Similarity=0.574 Sum_probs=248.7
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|+.|+.++.+..........|.++|+|++|+|+.+|+++..|++||+|++.+..+|+.|.+|..|++++|+.
T Consensus 30 V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 109 (341)
T cd05281 30 IKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQN 109 (341)
T ss_pred EEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcc
Confidence 68999999999998765421111123457889999999999999999999999999998888999999999999999987
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 160 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g 160 (319)
..+.+. ...|+|++|+.++.+.++++|++++.++++++.++.++++++. ...+++++|+|.|+|++|++++|+|+..|
T Consensus 110 ~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~-~~~~~g~~vlV~g~g~vg~~~~~la~~~G 187 (341)
T cd05281 110 TKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL-AGDVSGKSVLITGCGPIGLMAIAVAKAAG 187 (341)
T ss_pred cceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-hcCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 655443 3579999999999999999999999877766678888888875 45688999999988999999999999999
Q ss_pred CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 161 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 161 ~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
.+.++++++++++.++++++|+++++++. ..++. .+.++. .+.++|++||++|+......++++|+++|+++.+|
T Consensus 188 ~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g 262 (341)
T cd05281 188 ASLVIASDPNPYRLELAKKMGADVVINPR--EEDVV-EVKSVT--DGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILG 262 (341)
T ss_pred CcEEEEECCCHHHHHHHHHhCcceeeCcc--cccHH-HHHHHc--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEc
Confidence 86677778889999999999998877643 23444 454443 35689999999998767889999999999999998
Q ss_pred ccCCcccccch-HHHhcCcEEEEeecc--CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEE
Q 020928 241 LAKTEMTVALT-PAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 317 (319)
Q Consensus 241 ~~~~~~~~~~~-~~~~~~~~i~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 317 (319)
.......+... ...++++.+.+.... .+.+.++++++.++.+.+.+.+.+.+++ ++++++++.+.++. .||+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~-~gk~vv 339 (341)
T cd05281 263 LPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPL--EDFEEAFELMRSGK-CGKVVL 339 (341)
T ss_pred cCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEecH--HHHHHHHHHHhcCC-CceEEe
Confidence 64432222222 356677777766532 4567789999999998765666677888 99999999999988 899998
Q ss_pred e
Q 020928 318 N 318 (319)
Q Consensus 318 ~ 318 (319)
+
T Consensus 340 ~ 340 (341)
T cd05281 340 Y 340 (341)
T ss_pred c
Confidence 5
No 60
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1e-36 Score=270.89 Aligned_cols=307 Identities=37% Similarity=0.663 Sum_probs=250.7
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|+.|+.+..+.... ..+|.++|+|++|+|+++|++++.|++||+|++.+..+|+.|.-|..+..++|..
T Consensus 29 v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 105 (337)
T cd08261 29 VRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCEN 105 (337)
T ss_pred EEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCC
Confidence 5899999999999998764321 2457899999999999999999999999999998888999999999999999853
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 160 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g 160 (319)
....+ ....|+|++|+.++++ ++++|+++++++|++++.+.++++++...+++++++|||+|+|.+|.+++|+|+.+|
T Consensus 106 ~~~~~-~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~~~~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g 183 (337)
T cd08261 106 LQVLG-VHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARG 183 (337)
T ss_pred CCeee-ecCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 21111 1246999999999999 999999999999988777888888886689999999999998999999999999999
Q ss_pred CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 161 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 161 ~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
+ .++++.+++++.++++++++++++++.. .++...+.++. .+.++|++||++|+...+..++++|+++|+++.++
T Consensus 184 ~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g 258 (337)
T cd08261 184 A-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELT--DGEGADVVIDATGNPASMEEAVELVAHGGRVVLVG 258 (337)
T ss_pred C-eEEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEc
Confidence 9 5777778899999999999999887543 34555555543 34579999999988668899999999999999988
Q ss_pred ccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcC-CCceEEEEe
Q 020928 241 LAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFN 318 (319)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi~ 318 (319)
.......+....+..+++.+.+.... .+.++++++++++|.+.+.+....++++ ++++++++.+.++ ...+|+|++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~v~~ 336 (337)
T cd08261 259 LSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPF--EDVPEAFDLWEAPPGGVIKVLIE 336 (337)
T ss_pred CCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeH--HHHHHHHHHHhcCCCceEEEEEe
Confidence 65433333444556677777765433 4568889999999999653346677888 9999999999988 488999987
Q ss_pred C
Q 020928 319 L 319 (319)
Q Consensus 319 ~ 319 (319)
+
T Consensus 337 ~ 337 (337)
T cd08261 337 F 337 (337)
T ss_pred C
Confidence 5
No 61
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=7.3e-37 Score=272.74 Aligned_cols=307 Identities=30% Similarity=0.482 Sum_probs=253.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++++|++|+....|... ...+|.++|+|++|+|+.+|+++++|++||+|++.+..+|++|.+|..|..++|++
T Consensus 30 v~v~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 106 (345)
T cd08260 30 VEVEACGVCRSDWHGWQGHDP---DVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEH 106 (345)
T ss_pred EEEEEeeccHHHHHHhcCCCC---CCCCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCC
Confidence 578999999999998877532 13568899999999999999999999999999986667899999999999999998
Q ss_pred cccccCCCCCCcceeEEeecCC--ceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCCeEEEECCCHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAA 156 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~--~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~g~vG~~ai~la 156 (319)
....+. ...|+|++|+.++.. .++++|+++++++++.+. .+.+||+++ +.+++.++++++|+|+|++|++++|+|
T Consensus 107 ~~~~~~-~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a 185 (345)
T cd08260 107 QVQPGF-THPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIA 185 (345)
T ss_pred Cccccc-CCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHH
Confidence 743332 247999999999975 899999999999988775 788999998 458899999999999999999999999
Q ss_pred HHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEE
Q 020928 157 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV 236 (319)
Q Consensus 157 ~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~ 236 (319)
+..|+ .++++++++++.++++++|++.++++.. ..++...+..+. .+ ++|++||++|+.......+++++++|++
T Consensus 186 ~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~--~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~ 260 (345)
T cd08260 186 SALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAVRDLT--GG-GAHVSVDALGIPETCRNSVASLRKRGRH 260 (345)
T ss_pred HHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHHHHHh--CC-CCCEEEEcCCCHHHHHHHHHHhhcCCEE
Confidence 99999 6788888899999999999988887542 134555555443 23 7999999999766888999999999999
Q ss_pred EEecccCCc---ccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCc
Q 020928 237 CLIGLAKTE---MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 312 (319)
Q Consensus 237 v~~g~~~~~---~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 312 (319)
+.+|..... ..+....+..+++.+.+.... .+.+++++++++++++.+.+.+.+.+++ +++++|++.++++...
T Consensus 261 i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~--~~~~~a~~~~~~~~~~ 338 (345)
T cd08260 261 VQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDPEPLVGRTISL--DEAPDALAAMDDYATA 338 (345)
T ss_pred EEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCChhhheeEEecH--HHHHHHHHHHHcCCCC
Confidence 999864322 233444455778888886554 5578889999999998655446677888 9999999999999999
Q ss_pred eEEEEe
Q 020928 313 IKVMFN 318 (319)
Q Consensus 313 gkvvi~ 318 (319)
+|+|++
T Consensus 339 ~~~v~~ 344 (345)
T cd08260 339 GITVIT 344 (345)
T ss_pred ceEEec
Confidence 999875
No 62
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=9.9e-37 Score=271.70 Aligned_cols=305 Identities=37% Similarity=0.651 Sum_probs=251.2
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|+.|+..+.+.. ....|.++|+|++|+|+.+|+++..|++||+|++.+...|+.|.+|..|..+.|+.
T Consensus 29 v~v~~~~~n~~d~~~~~~~~----~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 104 (343)
T cd08236 29 VKVKACGICGSDIPRYLGTG----AYHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSN 104 (343)
T ss_pred EEEEEEEECccchHhhcCCC----CCCCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCC
Confidence 68899999999999887632 23467899999999999999999999999999999888999999999999999987
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 160 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g 160 (319)
..+++. ...|+|++|+.++.+.++++|+++++++|++++++.+||+++...+++++++|+|+|+|.+|++++|+|+.+|
T Consensus 105 ~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G 183 (343)
T cd08236 105 YDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLAGITLGDTVVVIGAGTIGLLAIQWLKILG 183 (343)
T ss_pred cceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 655543 3679999999999999999999999999988878889999998788999999999998999999999999999
Q ss_pred CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 161 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 161 ~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
++.++++++++++.++++++|++.++++.. .. ...+.+.. .+.++|++|||+|+......++++|+++|+++.+|
T Consensus 184 ~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g 258 (343)
T cd08236 184 AKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT--EGRGADLVIEAAGSPATIEQALALARPGGKVVLVG 258 (343)
T ss_pred CCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEc
Confidence 965888888888999999999988777543 22 44444443 35579999999987668899999999999999998
Q ss_pred ccCCccc---ccchHHHhcCcEEEEeecc------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhc-CC
Q 020928 241 LAKTEMT---VALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ-GG 310 (319)
Q Consensus 241 ~~~~~~~---~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~ 310 (319)
....... .....+..++..+.++... .+.++++.++++++.+.+.+...+.+++ ++++++++.+++ ..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 336 (343)
T cd08236 259 IPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPL--EDGPAAFERLADREE 336 (343)
T ss_pred ccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecH--HHHHHHHHHHHcCCC
Confidence 5443211 1223345678888776543 3457889999999998644456677888 999999999998 67
Q ss_pred CceEEEE
Q 020928 311 NAIKVMF 317 (319)
Q Consensus 311 ~~gkvvi 317 (319)
..+|+|+
T Consensus 337 ~~~k~v~ 343 (343)
T cd08236 337 FSGKVLL 343 (343)
T ss_pred CeeEEeC
Confidence 7889875
No 63
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=7.1e-37 Score=274.44 Aligned_cols=306 Identities=31% Similarity=0.491 Sum_probs=247.4
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|+.|+.++.|.. +..+|.++|+|++|+|+++|+++.+|++||+|++.+..+|++|.+|++++.++|+.
T Consensus 30 i~v~~~~i~~~d~~~~~g~~----~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 105 (363)
T cd08279 30 VRIAAAGLCHSDLHVVTGDL----PAPLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDL 105 (363)
T ss_pred EEEEEeecCcHHHHHhcCCC----CCCCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcc
Confidence 58899999999999887643 24567899999999999999999999999999999999999999999999999976
Q ss_pred cccc-cC------------------CCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCCe
Q 020928 81 MRFF-GS------------------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETN 139 (319)
Q Consensus 81 ~~~~-~~------------------~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~ 139 (319)
.... +. ....|+|+||+.++++.++++|+++++++++.++ .+.+||+++ +..+++++++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~ 185 (363)
T cd08279 106 GAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDT 185 (363)
T ss_pred cccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCE
Confidence 4310 00 0236899999999999999999999999998876 678888887 4588999999
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCC
Q 020928 140 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 219 (319)
Q Consensus 140 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~ 219 (319)
|||+|+|++|++++++|+..|+++|+++++++++.++++++|+++++++. ..++...+.++. .+.++|++||++++
T Consensus 186 vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~--~~~~~~~l~~~~--~~~~vd~vld~~~~ 261 (363)
T cd08279 186 VAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS--EDDAVEAVRDLT--DGRGADYAFEAVGR 261 (363)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC--CccHHHHHHHHc--CCCCCCEEEEcCCC
Confidence 99998899999999999999996688888999999999999998877643 335555555443 25679999999997
Q ss_pred hHHHHHHHHhhcCCCEEEEecccCC--cccccchHHHhcCcEEEEeec----cCCCHHHHHHHHHcCCCCCCCceeeeec
Q 020928 220 DKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFR----YRSTWPLCIEFLRSGKIDVKPLITHRFG 293 (319)
Q Consensus 220 ~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 293 (319)
.......+++++++|+++.++.... ...+....+..++..+.+... ..+.+++++++++++.+.+.+.+.++++
T Consensus 262 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~ 341 (363)
T cd08279 262 AATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYS 341 (363)
T ss_pred hHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEc
Confidence 6688999999999999999985432 223444445556666665532 2456888999999999865555667788
Q ss_pred CChhhHHHHHHHHhcCCCceEEE
Q 020928 294 FTQKEIEDAFEISAQGGNAIKVM 316 (319)
Q Consensus 294 ~~~~~~~~a~~~~~~~~~~gkvv 316 (319)
+ +++++|++.+.+++..+.++
T Consensus 342 ~--~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 342 L--DEINEAFADMLAGENARGVI 362 (363)
T ss_pred H--HHHHHHHHHHhcCCceeEEe
Confidence 8 99999999999887654444
No 64
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=7.3e-37 Score=275.38 Aligned_cols=306 Identities=26% Similarity=0.422 Sum_probs=245.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++|+|++|++...|... ...|.++|||++|+|+++|+++..|++||+|++.+..+|+.|..|+.|++.+|..
T Consensus 30 v~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~ 105 (375)
T cd08282 30 VRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLT 105 (375)
T ss_pred EEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCC
Confidence 689999999999999887542 3468999999999999999999999999999998888999999999999999975
Q ss_pred ccc---------ccCCCCCCcceeEEeecCC--ceEeCCCCCChhh---hhcc-chhHHHHHHHHhcCCCCCCeEEEECC
Q 020928 81 MRF---------FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEE---GAMC-EPLSVGVHACRRANVGPETNVMIMGS 145 (319)
Q Consensus 81 ~~~---------~~~~~~~g~~~e~~~~~~~--~~~~iP~~~~~~~---aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~ 145 (319)
... .+....+|+|+||+.++.. .++++|+++++++ ++.+ ..+.+||+++..++++++++|+|.|+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g~ 185 (375)
T cd08282 106 VNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGA 185 (375)
T ss_pred CCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHHHhcCCCCCCEEEEECC
Confidence 321 1122346999999999976 8999999999984 4444 47889999997789999999999999
Q ss_pred CHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChH----
Q 020928 146 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK---- 221 (319)
Q Consensus 146 g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~---- 221 (319)
|++|++++|+|+.+|+..++++++++++.++++++|+. .+++ ...++...+.++. +.++|++|||+|++.
T Consensus 186 g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~--~~~~~~~~i~~~~---~~~~d~v~d~~g~~~~~~~ 259 (375)
T cd08282 186 GPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDF--SDGDPVEQILGLE---PGGVDRAVDCVGYEARDRG 259 (375)
T ss_pred CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-Eecc--CcccHHHHHHHhh---CCCCCEEEECCCCcccccc
Confidence 99999999999999986678888999999999999984 3443 2345555555443 357999999999762
Q ss_pred -------HHHHHHHhhcCCCEEEEecccCCc-------------ccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcC
Q 020928 222 -------TMSTALNATRPGGKVCLIGLAKTE-------------MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG 280 (319)
Q Consensus 222 -------~~~~~~~~l~~~G~~v~~g~~~~~-------------~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g 280 (319)
.+..++++++++|+++.+|..... ..+....+..++..+.+.... .+.+.++++++.++
T Consensus 260 ~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 339 (375)
T cd08282 260 GEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAG 339 (375)
T ss_pred cccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecCCchhhHHHHHHHHHcC
Confidence 478899999999999887753211 122334455667766665443 55688899999999
Q ss_pred CCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 281 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
++.+...+.+++++ ++++++++.+.++. .+|+|+++
T Consensus 340 ~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 340 RAKPSFVVSHVISL--EDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred CCChHHcEEEEeeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence 99654457788888 99999999999888 89999864
No 65
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=5.8e-37 Score=278.08 Aligned_cols=311 Identities=20% Similarity=0.211 Sum_probs=247.2
Q ss_pred CCcceEeeccCCccccccccccc------cc-cCCC-cccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCAN------FI-VKKP-MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKA 72 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~------~~-~~~p-~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 72 (319)
||+.++|+|++|++...+..... +. ...| .++|||++|+|+++|+++++|++||+|++....+|++|++|..
T Consensus 42 V~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 121 (398)
T TIGR01751 42 VAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRV 121 (398)
T ss_pred EEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhcc
Confidence 58899999999987665432110 00 1234 3899999999999999999999999999998899999999999
Q ss_pred CCCCCCCCcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHH---hcCCCCCCeEEEECC-CH
Q 020928 73 GSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR---RANVGPETNVMIMGS-GP 147 (319)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~---~~~~~~~~~vlI~G~-g~ 147 (319)
|+..+|+...+.+.....|+|+||+.++...++++|+++++++++.+. .+.+||+++. .++++++++++|+|+ |+
T Consensus 122 ~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~ 201 (398)
T TIGR01751 122 GDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGG 201 (398)
T ss_pred CccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcH
Confidence 999999876555544467999999999999999999999999998775 7788999874 378899999999995 99
Q ss_pred HHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCC--------------------cchhHHHHHhhhhcC
Q 020928 148 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI--------------------EDVDTDVGKIQNAMG 207 (319)
Q Consensus 148 vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~--------------------~~~~~~i~~~~~~~~ 207 (319)
+|++++|+|+.+|+ .++++++++++.++++++|++.++++...+ ..+...+.++. .+
T Consensus 202 vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 278 (398)
T TIGR01751 202 LGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELT--GG 278 (398)
T ss_pred HHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHc--CC
Confidence 99999999999999 566677888899999999999988753210 01222232222 34
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEecccCCc-ccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCC
Q 020928 208 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK 285 (319)
Q Consensus 208 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~ 285 (319)
.++|++|||+|+. .+...+++++++|+++.+|..... ..+....+..++..+.+.... .+++++++++++++++.
T Consensus 279 ~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-- 355 (398)
T TIGR01751 279 EDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRID-- 355 (398)
T ss_pred CCceEEEECCcHH-HHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcc--
Confidence 6799999999964 788899999999999999864332 344445566677777776543 33478899999999884
Q ss_pred CceeeeecCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 286 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 286 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
+.+.+++++ ++++++++.+.++...||+|+++
T Consensus 356 ~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~ 387 (398)
T TIGR01751 356 PTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV 387 (398)
T ss_pred cceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence 446688888 99999999999999999999864
No 66
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4e-37 Score=273.91 Aligned_cols=275 Identities=17% Similarity=0.194 Sum_probs=220.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCccccc--ceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGH--ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC 78 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~--e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ 78 (319)
|||.++|+||.|+..+.+.. . ....|+++|+ |++|+|..+|+++++|++||+|++
T Consensus 48 Vkv~a~~inp~~~~~~~~~~-~--~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~-------------------- 104 (348)
T PLN03154 48 VKNLYLSCDPYMRGRMRDFH-D--SYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISG-------------------- 104 (348)
T ss_pred EEEEEEccCHHHHHhhhccC-C--CCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEe--------------------
Confidence 68999999999886543311 1 1246899998 889999999999999999999985
Q ss_pred CCcccccCCCCCCcceeEEeecCCc--eE--eCCCCCChh-hhhcc-chhHHHHHHHH-hcCCCCCCeEEEECC-CHHHH
Q 020928 79 PEMRFFGSPPTNGSLAHKVVHPAKL--CY--KLPDNVSLE-EGAMC-EPLSVGVHACR-RANVGPETNVMIMGS-GPIGL 150 (319)
Q Consensus 79 ~~~~~~~~~~~~g~~~e~~~~~~~~--~~--~iP~~~~~~-~aa~~-~~~~~a~~~l~-~~~~~~~~~vlI~G~-g~vG~ 150 (319)
.|+|+||+.++.+. +. ++|++++++ +|+.+ .++.|||+++. .+++++|++|||+|+ |++|+
T Consensus 105 -----------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~ 173 (348)
T PLN03154 105 -----------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQ 173 (348)
T ss_pred -----------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHH
Confidence 36899999998753 54 458999986 56665 47889999985 488999999999985 99999
Q ss_pred HHHHHHHHcCCCeEEEecCChhHHHHHH-HcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHh
Q 020928 151 VTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 229 (319)
Q Consensus 151 ~ai~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~ 229 (319)
+++|+|+.+|+ +|+++++++++.++++ ++|++.++++.. ..++.+.+.++. +.++|++||++|+. .+..++++
T Consensus 174 ~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~---~~gvD~v~d~vG~~-~~~~~~~~ 247 (348)
T PLN03154 174 LVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKE-EPDLDAALKRYF---PEGIDIYFDNVGGD-MLDAALLN 247 (348)
T ss_pred HHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCC-cccHHHHHHHHC---CCCcEEEEECCCHH-HHHHHHHH
Confidence 99999999999 6888888999999987 799999988642 224555555443 45899999999975 88999999
Q ss_pred hcCCCEEEEecccCCc-c-----cccchHHHhcCcEEEEeecc------CCCHHHHHHHHHcCCCCCCCceeeeecCChh
Q 020928 230 TRPGGKVCLIGLAKTE-M-----TVALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQK 297 (319)
Q Consensus 230 l~~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 297 (319)
++++|+++.+|..... . ......+..+++++.+++.. .+.++++++++++|+++ +.+..+|+| +
T Consensus 248 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~--~~~~~~~~L--~ 323 (348)
T PLN03154 248 MKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIV--YIEDMSEGL--E 323 (348)
T ss_pred hccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCcc--CceecccCH--H
Confidence 9999999999964321 1 12344577788999887643 23577899999999994 456667888 9
Q ss_pred hHHHHHHHHhcCCCceEEEEeC
Q 020928 298 EIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 298 ~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
++++|++.+++++..||+|+++
T Consensus 324 ~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 324 SAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred HHHHHHHHHHcCCCCceEEEEe
Confidence 9999999999999999999974
No 67
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=4.8e-36 Score=266.64 Aligned_cols=305 Identities=31% Similarity=0.549 Sum_probs=253.3
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|+.|+....+... ...++|.++|+|++|+|+++|+++.+|++||+|++.+..+|+.|.+|+.++..+|..
T Consensus 31 i~v~~~~~~~~d~~~~~g~~~--~~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 108 (338)
T cd08254 31 VKVKAAGVCHSDLHILDGGVP--TLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLN 108 (338)
T ss_pred EEEEEEeeccHhHHHHcCCCc--ccCCCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCC
Confidence 578999999999998876542 123568899999999999999999999999999998888999999999999999865
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARA 158 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~ 158 (319)
..+.+. ...|+|++|+.++.+.++++|+++++++++.+ .++.+||+++.. .+++++++|||.|+|.+|++++++|+.
T Consensus 109 ~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~ 187 (338)
T cd08254 109 QGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKA 187 (338)
T ss_pred CCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHH
Confidence 544333 45799999999999999999999999998877 588999999855 779999999999889999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ .|+++++++++.+.++++|.+.++... .......+ .. ..+.++|+++|++|.......++++|+++|+++.
T Consensus 188 ~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~~~-~~--~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~ 261 (338)
T cd08254 188 MGA-AVIAVDIKEEKLELAKELGADEVLNSL--DDSPKDKK-AA--GLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVV 261 (338)
T ss_pred cCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC--CcCHHHHH-HH--hcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEE
Confidence 998 588888999999999999988876643 22333333 22 2456899999999877788999999999999999
Q ss_pred ecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEE
Q 020928 239 IGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 317 (319)
Q Consensus 239 ~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 317 (319)
++.......+....+..++.++.+++.. .+.+..++++++++.+.+. .+.+++ ++++++++.+.+++..+|+++
T Consensus 262 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~~~~~--~~~~~a~~~~~~~~~~~kvv~ 336 (338)
T cd08254 262 VGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ---VETRPL--DEIPEVLERLHKGKVKGRVVL 336 (338)
T ss_pred ECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc---ceeEcH--HHHHHHHHHHHcCCccceEEE
Confidence 9865444445555677788888876654 5678889999999998543 466778 999999999999999999998
Q ss_pred eC
Q 020928 318 NL 319 (319)
Q Consensus 318 ~~ 319 (319)
++
T Consensus 337 ~~ 338 (338)
T cd08254 337 VP 338 (338)
T ss_pred eC
Confidence 74
No 68
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=5.9e-36 Score=265.73 Aligned_cols=303 Identities=37% Similarity=0.633 Sum_probs=251.4
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++++|+.|+....|.. +..+|.++|+|++|+|+++|+++++|++||+|++.+..+|+.|.+|..++.++|+.
T Consensus 29 v~v~~~~l~~~d~~~~~g~~----~~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 104 (334)
T cd08234 29 IKVAACGICGTDLHIYEGEF----GAAPPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCEN 104 (334)
T ss_pred EEEEEEeEchhhhHHhcCCC----CCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCC
Confidence 68999999999999887754 23478899999999999999999999999999998888999999999999999987
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 160 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g 160 (319)
..+++. ...|+|++|+.++.+.++++|+++++.+|+.+.++.+++++++.++++++++++|+|+|.+|++++++|+..|
T Consensus 105 ~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G 183 (334)
T cd08234 105 LTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNG 183 (334)
T ss_pred cceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 765432 2579999999999999999999999999987777788998887789999999999998999999999999999
Q ss_pred CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 161 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 161 ~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
+++++++++++++.++++++|++.++++.. .++... ....+.++|++||++|........+++|+++|+++.+|
T Consensus 184 ~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~----~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g 257 (334)
T cd08234 184 ASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ----KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFG 257 (334)
T ss_pred CcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH----HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEe
Confidence 965888888999999999999887776533 232222 12235689999999987668889999999999999998
Q ss_pred ccCC--cccccchHHHhcCcEEEEeeccCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEE
Q 020928 241 LAKT--EMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 317 (319)
Q Consensus 241 ~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 317 (319)
.... ...+....+..+++.+.+.....+.+++++++++++++.+.+...+++++ ++++++++.+.+ ...+|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 258 VYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSHRLPL--EEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred cCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEEEecH--HHHHHHHHHHhc-CCceEEEe
Confidence 6432 22333333445778888776656678899999999998665556677888 999999999998 78899986
No 69
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.1e-36 Score=269.25 Aligned_cols=277 Identities=16% Similarity=0.197 Sum_probs=221.1
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCC-CCCCCEEEEccCccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 79 (319)
|||.++|+|++|++..+|.... ...+|.++|||++|+|+++|+++++ |++||+|++..
T Consensus 35 v~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~------------------- 93 (324)
T cd08291 35 IKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLA------------------- 93 (324)
T ss_pred EEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecC-------------------
Confidence 5899999999999988774321 2356899999999999999999996 99999998641
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEE--CCCHHHHHHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIM--GSGPIGLVTLLAA 156 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~--G~g~vG~~ai~la 156 (319)
...|+|+||+.++++.++++|+++++++|+.++ ...+||..++..+. ++++++|+ |+|++|++++|+|
T Consensus 94 --------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a 164 (324)
T cd08291 94 --------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLETARE-EGAKAVVHTAAASALGRMLVRLC 164 (324)
T ss_pred --------CCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHH
Confidence 014999999999999999999999999988653 56677755555655 55566665 5799999999999
Q ss_pred HHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEE
Q 020928 157 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV 236 (319)
Q Consensus 157 ~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~ 236 (319)
+.+|+ .++++++++++.++++++|+++++++. ..++.+.+.++. .+.++|++||++|+. .....+++++++|++
T Consensus 165 ~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~--~~~~~~~v~~~~--~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~ 238 (324)
T cd08291 165 KADGI-KVINIVRRKEQVDLLKKIGAEYVLNSS--DPDFLEDLKELI--AKLNATIFFDAVGGG-LTGQILLAMPYGSTL 238 (324)
T ss_pred HHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECC--CccHHHHHHHHh--CCCCCcEEEECCCcH-HHHHHHHhhCCCCEE
Confidence 99999 688888999999999999999988754 345666665554 356899999999987 667789999999999
Q ss_pred EEecccCC-cc-cccchHHHhcCcEEEEeecc-------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHh
Q 020928 237 CLIGLAKT-EM-TVALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 307 (319)
Q Consensus 237 v~~g~~~~-~~-~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~ 307 (319)
+.+|.... .. .++...+..+++++.++... .+.+++++++++ +.+ ++.++++|++ +|+.+|++.++
T Consensus 239 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~ 313 (324)
T cd08291 239 YVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPL--ALTLEAIAFYS 313 (324)
T ss_pred EEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcH--HHHHHHHHHHH
Confidence 99985432 22 24345566788888887643 224667788887 766 6778889999 99999999999
Q ss_pred cCCCceEEEEe
Q 020928 308 QGGNAIKVMFN 318 (319)
Q Consensus 308 ~~~~~gkvvi~ 318 (319)
++...||+++.
T Consensus 314 ~~~~~Gkvv~~ 324 (324)
T cd08291 314 KNMSTGKKLLI 324 (324)
T ss_pred hCCCCCeEEeC
Confidence 99899999974
No 70
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=6e-36 Score=266.13 Aligned_cols=303 Identities=25% Similarity=0.443 Sum_probs=244.4
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcc-CccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~ 79 (319)
|||+++++|++|++...|.. +...|.++|||++|+|+++|+++++|++||+|++.+ ..+|+.|.+|..+...+|.
T Consensus 30 v~v~~~~i~~~d~~~~~g~~----~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 105 (338)
T PRK09422 30 VKMEYCGVCHTDLHVANGDF----GDKTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCR 105 (338)
T ss_pred EEEEEEeechhHHHHHcCCC----CCCCCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCC
Confidence 58999999999999887643 223478999999999999999999999999999754 4479999999999999997
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 158 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~ 158 (319)
.....+. ...|+++||+.++...++++|+++++++++.++ .+.+||++++.++++++++|||+|+|++|++++++|+.
T Consensus 106 ~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~la~~ 184 (338)
T PRK09422 106 SVKNAGY-TVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKN 184 (338)
T ss_pred CccccCc-cccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHH
Confidence 6654332 357999999999999999999999999998875 67889999977899999999999999999999999998
Q ss_pred -cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 159 -FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 159 -~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
.|+ .++++++++++.++++++|++.++++.. ..++...+.+.. + ++|.++.+.++.+.+..++++++.+|+++
T Consensus 185 ~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~~---~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v 258 (338)
T PRK09422 185 VFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEKT---G-GAHAAVVTAVAKAAFNQAVDAVRAGGRVV 258 (338)
T ss_pred hCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHhc---C-CCcEEEEeCCCHHHHHHHHHhccCCCEEE
Confidence 498 6888889999999999999988876532 133444444432 3 68855544455568999999999999999
Q ss_pred EecccCCcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEE
Q 020928 238 LIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 316 (319)
Q Consensus 238 ~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 316 (319)
.+|.......+.......+...+.+.... .+.++.+++++.+|.+. +.+ ..+++ +++++|++.+.++...||++
T Consensus 259 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~v-~~~~~--~~~~~a~~~~~~~~~~gkvv 333 (338)
T PRK09422 259 AVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVV--PKV-QLRPL--EDINDIFDEMEQGKIQGRMV 333 (338)
T ss_pred EEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCC--ccE-EEEcH--HHHHHHHHHHHcCCccceEE
Confidence 99865433344445566678888776543 45688899999999884 334 45777 99999999999999999999
Q ss_pred EeC
Q 020928 317 FNL 319 (319)
Q Consensus 317 i~~ 319 (319)
+++
T Consensus 334 v~~ 336 (338)
T PRK09422 334 IDF 336 (338)
T ss_pred Eec
Confidence 863
No 71
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.4e-36 Score=247.32 Aligned_cols=280 Identities=17% Similarity=0.224 Sum_probs=220.4
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||..|+.|||+|+..++|.. +...++|.+-|.|++|+|+.+|+++++|++||+|+..
T Consensus 52 Vk~LAaPINPsDIN~IQGvY--pvrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~--------------------- 108 (354)
T KOG0025|consen 52 VKMLAAPINPSDINQIQGVY--PVRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPL--------------------- 108 (354)
T ss_pred eeeeecCCChHHhhhhcccc--CCCCCCCcccCCcceEEEEEecCCcCccCCCCeEeec---------------------
Confidence 57789999999999999864 3345789999999999999999999999999999964
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~-g~vG~~ai~la~ 157 (319)
....|+|++|.+.+++.++++++.+++++||++. -.+|||..|.. -++++||+|+-.|+ +++|++.||+|+
T Consensus 109 ------~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlak 182 (354)
T KOG0025|consen 109 ------SANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAK 182 (354)
T ss_pred ------CCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHH
Confidence 3357999999999999999999999999999996 57899999965 89999998887885 999999999999
Q ss_pred HcCCCeEEEecCChh---HHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCC
Q 020928 158 AFGAPRIIITDVDVQ---RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG 234 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~---~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G 234 (319)
++|++.|=++...++ -.+.++.+||++|+.-.... + ....... .....+.+.|||+|+. ....+.+.|..+|
T Consensus 183 a~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~-~--~~~~k~~-~~~~~prLalNcVGGk-sa~~iar~L~~Gg 257 (354)
T KOG0025|consen 183 ALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELR-D--RKMKKFK-GDNPRPRLALNCVGGK-SATEIARYLERGG 257 (354)
T ss_pred HhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhc-c--hhhhhhh-ccCCCceEEEeccCch-hHHHHHHHHhcCc
Confidence 999965555543332 34455679999998532111 0 0111111 1245789999999998 7788999999999
Q ss_pred EEEEec-ccCCcccccchHHHhcCcEEEEeecc------------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHH
Q 020928 235 KVCLIG-LAKTEMTVALTPAAAREVDVIGIFRY------------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIED 301 (319)
Q Consensus 235 ~~v~~g-~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 301 (319)
+++++| ++..+.++++..++|+++.+.|+|.. .+.+.++.+++++|++..... ...++ ++.+.
T Consensus 258 tmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~--e~v~L--~~~~t 333 (354)
T KOG0025|consen 258 TMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNC--EKVPL--ADHKT 333 (354)
T ss_pred eEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccc--eeeec--hhhhH
Confidence 999998 67888899999999999999999864 123567889999999954443 33467 77777
Q ss_pred HHHHHh-cCCCceEEEEe
Q 020928 302 AFEISA-QGGNAIKVMFN 318 (319)
Q Consensus 302 a~~~~~-~~~~~gkvvi~ 318 (319)
|++... .-...||.++.
T Consensus 334 ald~~L~~~~~~~Kq~i~ 351 (354)
T KOG0025|consen 334 ALDAALSKFGKSGKQIIV 351 (354)
T ss_pred HHHHHHHHhccCCceEEE
Confidence 777533 33344566554
No 72
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=7.1e-36 Score=266.38 Aligned_cols=279 Identities=18% Similarity=0.226 Sum_probs=209.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++|||+.|+...+......+..++|.++|||++|+|+++|+++++|++||||++.
T Consensus 41 V~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--------------------- 99 (345)
T cd08293 41 VRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF--------------------- 99 (345)
T ss_pred EEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---------------------
Confidence 68999999999864332110001223568899999999999999999999999999852
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhh-----hhccchhHHHHHHHH-hcCCCCC--CeEEEECC-CHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE-----GAMCEPLSVGVHACR-RANVGPE--TNVMIMGS-GPIGLV 151 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~-----aa~~~~~~~a~~~l~-~~~~~~~--~~vlI~G~-g~vG~~ 151 (319)
.++|+||+.++++.++++|+++++++ ++...++.+||+++. .++++++ ++|||+|+ |++|++
T Consensus 100 ---------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~ 170 (345)
T cd08293 100 ---------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSL 170 (345)
T ss_pred ---------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHH
Confidence 25799999999999999999864432 233457889999984 4778877 99999985 999999
Q ss_pred HHHHHHHcCCCeEEEecCChhHHHHHHH-cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhh
Q 020928 152 TLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 230 (319)
Q Consensus 152 ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l 230 (319)
++|+|+.+|+.+|+++++++++.+++++ +|++.++++.. .++.+.++++. +.++|++||++|+. ....++++|
T Consensus 171 aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~~---~~gvd~vid~~g~~-~~~~~~~~l 244 (345)
T cd08293 171 AGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLRELC---PEGVDVYFDNVGGE-ISDTVISQM 244 (345)
T ss_pred HHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHHC---CCCceEEEECCCcH-HHHHHHHHh
Confidence 9999999998568888889999998876 99999887543 46666666553 46899999999986 678999999
Q ss_pred cCCCEEEEecccC---Cccc--ccc----hHHH-hcCcEEEEeec--c----CCCHHHHHHHHHcCCCCCCCceeeeecC
Q 020928 231 RPGGKVCLIGLAK---TEMT--VAL----TPAA-AREVDVIGIFR--Y----RSTWPLCIEFLRSGKIDVKPLITHRFGF 294 (319)
Q Consensus 231 ~~~G~~v~~g~~~---~~~~--~~~----~~~~-~~~~~i~~~~~--~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 294 (319)
+++|+++.+|... .+.. ... ..+. .+++....+.. . .+.++++++++++|++++. ....+++
T Consensus 245 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l 322 (345)
T cd08293 245 NENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGL 322 (345)
T ss_pred ccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecH
Confidence 9999999998421 1111 111 1111 12333322211 1 2336678889999999543 3444577
Q ss_pred ChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 295 TQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 295 ~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
+++++|++.+.+++..||+|+++
T Consensus 323 --~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 323 --ENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred --HHHHHHHHHHhcCCCCCeEEEEC
Confidence 99999999999998899999975
No 73
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=3.9e-35 Score=261.20 Aligned_cols=306 Identities=26% Similarity=0.441 Sum_probs=251.4
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcc-CccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~ 79 (319)
|||.++++|++|+..+.+..... .+.|.++|+|++|+|+++|++++.|++||+|++.+ ..+|+.|.+|..++..+|+
T Consensus 31 v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 108 (341)
T cd08297 31 VKLEASGVCHTDLHAALGDWPVK--PKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCP 108 (341)
T ss_pred EEEEEeecchhHHHHHcCCCCcC--CCCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCC
Confidence 57899999999999887643221 24577899999999999999999999999999865 4579999999999999998
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGS-GPIGLVTLLAAR 157 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~ 157 (319)
.....+. ...|++++|+.++.+.++++|+++++++++.+ ..+.+||+++...++++++++||+|+ +++|++++++|+
T Consensus 109 ~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~ 187 (341)
T cd08297 109 NQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAK 187 (341)
T ss_pred Ccccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHH
Confidence 8655443 35789999999999999999999999998876 47788999987778999999999985 779999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
.+|+ .++++.+++++.+.++++|++.++++.. .++...+.++. .+.++|++||+.++......++++++++|+++
T Consensus 188 ~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~--~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v 262 (341)
T cd08297 188 AMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVKELT--GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLV 262 (341)
T ss_pred HCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHHHHHh--cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEE
Confidence 9999 6888888889999999999988877543 25555555443 35689999998877678899999999999999
Q ss_pred EecccCCc-ccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEE
Q 020928 238 LIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 315 (319)
Q Consensus 238 ~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 315 (319)
.+|..... .++....+..++..+.+.... .+.+++++++++++.+. +.+ ..|++ ++++++++.+.++...||+
T Consensus 263 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~-~~~~~--~~~~~a~~~~~~~~~~gkv 337 (341)
T cd08297 263 CVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVK--PHI-QVVPL--EDLNEVFEKMEEGKIAGRV 337 (341)
T ss_pred EecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCc--cee-EEEcH--HHHHHHHHHHHcCCccceE
Confidence 99865432 234444455788888876543 46788899999999984 333 56778 9999999999999999999
Q ss_pred EEeC
Q 020928 316 MFNL 319 (319)
Q Consensus 316 vi~~ 319 (319)
++++
T Consensus 338 vi~~ 341 (341)
T cd08297 338 VVDF 341 (341)
T ss_pred EEeC
Confidence 9975
No 74
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-35 Score=263.16 Aligned_cols=298 Identities=26% Similarity=0.418 Sum_probs=244.2
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++++|++|+....|... ..++|.++|||++|+|+.+|++++.+++||+|++.+..+|+.|.+|..|.+++|..
T Consensus 30 V~v~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~ 106 (334)
T PRK13771 30 IKVNYAGLCYRDLLQLQGFYP---RMKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKN 106 (334)
T ss_pred EEEEEEeechhhHHHhcCCCC---CCCCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCcc
Confidence 588999999999988776431 13567899999999999999999899999999998888999999999999999988
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGS-GPIGLVTLLAARA 158 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~ 158 (319)
...++. ...|+|++|+.++.+.++++|+++++++++.+. .+.++|+++...+++++++++|+|+ |++|++++|+|+.
T Consensus 107 ~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~ 185 (334)
T PRK13771 107 RLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKA 185 (334)
T ss_pred cccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHH
Confidence 665543 357999999999999999999999999998775 7788999987678999999999985 9999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ +++++++++++.+.++++ ++.++++. ++...++++ .++|++||++|+. ....++++++++|+++.
T Consensus 186 ~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~-----~~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~ 253 (334)
T PRK13771 186 LGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI-----GGADIVIETVGTP-TLEESLRSLNMGGKIIQ 253 (334)
T ss_pred cCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc-----CCCcEEEEcCChH-HHHHHHHHHhcCCEEEE
Confidence 999 678888888899988888 66555432 333333332 2699999999986 78899999999999999
Q ss_pred ecccCCcc--cccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEE
Q 020928 239 IGLAKTEM--TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 315 (319)
Q Consensus 239 ~g~~~~~~--~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 315 (319)
+|...... .........+++++.+.... .+.++.++++++++.++ +...+.+++ +++++|++.++++...+|+
T Consensus 254 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kv 329 (334)
T PRK13771 254 IGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIK--PVIGAEVSL--SEIDKALEELKDKSRIGKI 329 (334)
T ss_pred EeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCc--ceEeeeEcH--HHHHHHHHHHHcCCCcceE
Confidence 98643321 23333445677888776543 45688899999999884 446677888 9999999999988888999
Q ss_pred EEe
Q 020928 316 MFN 318 (319)
Q Consensus 316 vi~ 318 (319)
+++
T Consensus 330 v~~ 332 (334)
T PRK13771 330 LVK 332 (334)
T ss_pred EEe
Confidence 986
No 75
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=4.4e-35 Score=259.79 Aligned_cols=299 Identities=30% Similarity=0.523 Sum_probs=244.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++++|++|++...|... ....|.++|+|++|+|+++|+++++|++||+|++....+|+.|.+|..+.+++|+.
T Consensus 30 v~v~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 106 (332)
T cd08259 30 IKVKAAGVCYRDLLFWKGFFP---RGKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRN 106 (332)
T ss_pred EEEEEEecchhhhHHhcCCCC---CCCCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCC
Confidence 588999999999999877432 13567899999999999999999999999999999888999999999999999988
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEEC-CCHHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARA 158 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~ 158 (319)
...++ ....|+|++|+.++...++++|+++++++++.++ .+.+||++++.+++.+++++||+| +|.+|++++++++.
T Consensus 107 ~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~ 185 (332)
T cd08259 107 RAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKA 185 (332)
T ss_pred ccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 64443 3457999999999999999999999999998775 778999998778899999999998 59999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ .++++.+++++.+.+++++.+.+++.. ++.+.+.+. .++|++|+++|.. .....+++++++|+++.
T Consensus 186 ~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~ 254 (332)
T cd08259 186 LGA-RVIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL-----GGADVVIELVGSP-TIEESLRSLNKGGRLVL 254 (332)
T ss_pred cCC-eEEEEeCCHHHHHHHHHcCCcEEEecH----HHHHHHHhc-----cCCCEEEECCChH-HHHHHHHHhhcCCEEEE
Confidence 999 577777888888888888887765432 133333332 2799999999976 67889999999999999
Q ss_pred ecccCCcc-cccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEE
Q 020928 239 IGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 316 (319)
Q Consensus 239 ~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 316 (319)
++...... .........++..+.++... .+.+++++++++++.+. +.+.+++++ +++++|++.+.++...+|++
T Consensus 255 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv 330 (332)
T cd08259 255 IGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIK--PVIDRVVSL--EDINEALEDLKSGKVVGRIV 330 (332)
T ss_pred EcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCc--cceeEEEcH--HHHHHHHHHHHcCCcccEEE
Confidence 98543221 12333344567777766543 45678899999999884 446678888 99999999999998889998
Q ss_pred Ee
Q 020928 317 FN 318 (319)
Q Consensus 317 i~ 318 (319)
++
T Consensus 331 ~~ 332 (332)
T cd08259 331 LK 332 (332)
T ss_pred eC
Confidence 75
No 76
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.9e-35 Score=262.85 Aligned_cols=276 Identities=17% Similarity=0.167 Sum_probs=219.0
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccce--eEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHEC--AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC 78 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~--~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ 78 (319)
|||+++|||+.|++.+.|.... ...+|+++|++. .|++..+|+++++|++||+|++
T Consensus 42 v~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~-------------------- 99 (338)
T cd08295 42 VKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWG-------------------- 99 (338)
T ss_pred EEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEe--------------------
Confidence 6899999999999998874311 125688999754 4566668888999999999985
Q ss_pred CCcccccCCCCCCcceeEEeecC-CceEeCC-CCCChh-hhhcc-chhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHH
Q 020928 79 PEMRFFGSPPTNGSLAHKVVHPA-KLCYKLP-DNVSLE-EGAMC-EPLSVGVHACR-RANVGPETNVMIMGS-GPIGLVT 152 (319)
Q Consensus 79 ~~~~~~~~~~~~g~~~e~~~~~~-~~~~~iP-~~~~~~-~aa~~-~~~~~a~~~l~-~~~~~~~~~vlI~G~-g~vG~~a 152 (319)
.|+|+||+++++ ..++++| ++++++ +++.+ .++.|||+++. .+++++|++|||+|+ |++|+++
T Consensus 100 -----------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~a 168 (338)
T cd08295 100 -----------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLV 168 (338)
T ss_pred -----------cCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHH
Confidence 368999999999 7999995 578876 56665 47889999985 488999999999985 9999999
Q ss_pred HHHHHHcCCCeEEEecCChhHHHHHHH-cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhc
Q 020928 153 LLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231 (319)
Q Consensus 153 i~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~ 231 (319)
+|+|+.+|+ +++++++++++.+++++ +|++.++++.. ..++.+.+.++. +.++|++||++|+. .+..++++++
T Consensus 169 iqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~---~~gvd~v~d~~g~~-~~~~~~~~l~ 242 (338)
T cd08295 169 GQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE-EPDLDAALKRYF---PNGIDIYFDNVGGK-MLDAVLLNMN 242 (338)
T ss_pred HHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC-cccHHHHHHHhC---CCCcEEEEECCCHH-HHHHHHHHhc
Confidence 999999999 68888889999999998 99999887532 235555555443 46899999999975 8899999999
Q ss_pred CCCEEEEecccCCc-c-----cccchHHHhcCcEEEEeecc------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhH
Q 020928 232 PGGKVCLIGLAKTE-M-----TVALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEI 299 (319)
Q Consensus 232 ~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 299 (319)
++|+++.+|..... . ........++++++.++... .+.++++++++.+|++++. ....|++ +++
T Consensus 243 ~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l--~~~ 318 (338)
T cd08295 243 LHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGL--ESA 318 (338)
T ss_pred cCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCH--HHH
Confidence 99999999853321 1 12335567788888875442 2236778999999998543 4455777 999
Q ss_pred HHHHHHHhcCCCceEEEEeC
Q 020928 300 EDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 300 ~~a~~~~~~~~~~gkvvi~~ 319 (319)
++|++.+++++..||+|+++
T Consensus 319 ~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 319 PEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHhcCCCCceEEEEC
Confidence 99999999998999999975
No 77
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.1e-35 Score=262.80 Aligned_cols=297 Identities=21% Similarity=0.299 Sum_probs=233.1
Q ss_pred CCcceEeeccCCcccccccccc-----------------ccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCcc
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCA-----------------NFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGIS 63 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~-----------------~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~ 63 (319)
|||.++|+|++|+.++.|.... ....++|.++|||++|+|+++|+++++|++||+|++.+..+
T Consensus 33 i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 112 (350)
T cd08274 33 IRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIR 112 (350)
T ss_pred EEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcC
Confidence 5899999999999988764211 11245789999999999999999999999999999887777
Q ss_pred CCCCccccCCCCCCCCCcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEE
Q 020928 64 CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMI 142 (319)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI 142 (319)
|+.|..|.. +.+++ ....|++++|+.++...++++|+++++++++.+. .+.+||+++...++++++++||
T Consensus 113 ~~~~~~~~~--------~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI 183 (350)
T cd08274 113 DPPEDDPAD--------IDYIG-SERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLV 183 (350)
T ss_pred CCCcccccc--------ccccC-CCCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHHhhcCCCCCCEEEE
Confidence 777665421 11122 1236999999999999999999999999888774 7888999987789999999999
Q ss_pred ECC-CHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChH
Q 020928 143 MGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 221 (319)
Q Consensus 143 ~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~ 221 (319)
+|+ |++|++++++|+.+|++ ++++++++ +.+.++++|++.+.+. ....+.. . ....+.++|++||++|+.
T Consensus 184 ~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~--~~~~~~~--~--~~~~~~~~d~vi~~~g~~- 254 (350)
T cd08274 184 TGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILR--DAPLLAD--A--KALGGEPVDVVADVVGGP- 254 (350)
T ss_pred EcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeC--CCccHHH--H--HhhCCCCCcEEEecCCHH-
Confidence 985 99999999999999995 66666555 7888899998654432 2222222 1 222456899999999975
Q ss_pred HHHHHHHhhcCCCEEEEecccCCc-ccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhH
Q 020928 222 TMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEI 299 (319)
Q Consensus 222 ~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 299 (319)
.+...+++++++|+++.+|..... ..+....+..++..+.++... .+.+.++++++.+++++ +...+++++ +++
T Consensus 255 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~~~--~~~ 330 (350)
T cd08274 255 LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEIR--PVVAKTFPL--SEI 330 (350)
T ss_pred HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHHHCCCcc--cccccccCH--HHH
Confidence 889999999999999999854322 344455556788888887665 45688899999999884 445677788 999
Q ss_pred HHHHHHHhcCCCceEEEEeC
Q 020928 300 EDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 300 ~~a~~~~~~~~~~gkvvi~~ 319 (319)
+++++.+.++...+|++++.
T Consensus 331 ~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 331 REAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HHHHHHHhcCCCceEEEEeC
Confidence 99999999988899999863
No 78
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=6.6e-35 Score=258.49 Aligned_cols=292 Identities=23% Similarity=0.359 Sum_probs=239.6
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEcc-CccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~ 79 (319)
||+.++++|++|++...|.... ...|.++|||++|+|+.+|+++.+|++||+|++.+ ..+|+.|.+|..+.+++|+
T Consensus 34 irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 110 (329)
T cd08298 34 IKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCD 110 (329)
T ss_pred EEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCC
Confidence 5889999999999988764311 24588999999999999999999999999998754 3589999999999999999
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 158 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~ 158 (319)
...+.+. ...|+|+||+.++...++++|+++++.+++.+ ..+.+||++++.++++++++++|+|+|++|++++++|+.
T Consensus 111 ~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~ 189 (329)
T cd08298 111 NARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRALKLAGLKPGQRLGLYGFGASAHLALQIARY 189 (329)
T ss_pred Ccccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHH
Confidence 8876654 24799999999999999999999999998877 478899999977999999999999999999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ .++++++++++.++++++|++.++++... .+.++|+++++.+........+++++++|+++.
T Consensus 190 ~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------------~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~ 254 (329)
T cd08298 190 QGA-EVFAFTRSGEHQELARELGADWAGDSDDL--------------PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVL 254 (329)
T ss_pred CCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc--------------CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEE
Confidence 998 68888888899999999998777654321 135799999987766688999999999999998
Q ss_pred ecccCCcc-cccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEE
Q 020928 239 IGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 316 (319)
Q Consensus 239 ~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 316 (319)
+|...... .++.. ...++..+.+.... .+.+..++++++++.+.+ . .++|++ +++++|++.+++++..||++
T Consensus 255 ~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~--~-~~~~~~--~~~~~a~~~~~~~~~~~~~v 328 (329)
T cd08298 255 AGIHMSDIPAFDYE-LLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKP--E-VETYPL--EEANEALQDLKEGRIRGAAV 328 (329)
T ss_pred EcCCCCCCCccchh-hhhCceEEEEecCCCHHHHHHHHHHHHcCCCCc--e-EEEEeH--HHHHHHHHHHHcCCCcceee
Confidence 87533211 11222 23456666666544 446788999999998853 3 477888 99999999999999999987
Q ss_pred E
Q 020928 317 F 317 (319)
Q Consensus 317 i 317 (319)
+
T Consensus 329 ~ 329 (329)
T cd08298 329 L 329 (329)
T ss_pred C
Confidence 4
No 79
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=2.1e-34 Score=256.21 Aligned_cols=306 Identities=27% Similarity=0.446 Sum_probs=247.3
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++|+|++|+....|.... ....|.++|||++|+|+.+|+++.+|++||+|++.+..+|+.|.+|..+.+++|+.
T Consensus 32 v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 109 (342)
T cd08266 32 VRVKAAALNHLDLWVRRGMPGI--KLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQ 109 (342)
T ss_pred EEEEeeecCHHHHHHhcCCCCC--CCCCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhcccccccccc
Confidence 5789999999999988774321 23568899999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCCeEEEECC-CHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGS-GPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G~-g~vG~~ai~la~ 157 (319)
..+.+. ...|++++|+.++.+.++++|+++++++++.++ .+.++++++ +..+++++++++|+|+ +.+|++++++++
T Consensus 110 ~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~ 188 (342)
T cd08266 110 YGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAK 188 (342)
T ss_pred cccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHH
Confidence 765543 357899999999999999999999999998775 678899887 4588999999999985 799999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .++.+++++++.+.+++++.+.+++. ...++...+.... .+.++|++++++|+. .+...+++++++|+++
T Consensus 189 ~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v 262 (342)
T cd08266 189 LFGA-TVIATAGSEDKLERAKELGADYVIDY--RKEDFVREVRELT--GKRGVDVVVEHVGAA-TWEKSLKSLARGGRLV 262 (342)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHcCCCeEEec--CChHHHHHHHHHh--CCCCCcEEEECCcHH-HHHHHHHHhhcCCEEE
Confidence 9999 57788888888888888887665543 3334444444332 245799999999975 7888999999999999
Q ss_pred EecccCCc-ccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEE
Q 020928 238 LIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 315 (319)
Q Consensus 238 ~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 315 (319)
.++..... ..+.......+++.+.+.... ...+.+++++++++.+. +...+.|++ +++++|++.+.++...+|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kv 338 (342)
T cd08266 263 TCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLK--PVIDSVFPL--EEAAEAHRRLESREQFGKI 338 (342)
T ss_pred EEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcc--cceeeeEcH--HHHHHHHHHHHhCCCCceE
Confidence 99854322 223333345667777776544 44678899999999874 446677888 9999999999988888999
Q ss_pred EEeC
Q 020928 316 MFNL 319 (319)
Q Consensus 316 vi~~ 319 (319)
+++.
T Consensus 339 v~~~ 342 (342)
T cd08266 339 VLTP 342 (342)
T ss_pred EEeC
Confidence 9863
No 80
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=8.4e-35 Score=257.39 Aligned_cols=291 Identities=24% Similarity=0.406 Sum_probs=233.2
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+....+.. ...+|.++|||++|+|+.+|+++++|++||+|++.+..+|+.|.+|..|++++|+.
T Consensus 31 v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~ 106 (325)
T cd08264 31 IRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRN 106 (325)
T ss_pred EEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCc
Confidence 57899999999998876311 12357899999999999999999999999999999888999999999999999998
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGS-GPIGLVTLLAARA 158 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~ 158 (319)
..+++. ...|+|++|+.++.+.++++|+++++++++.++ .+.+||+++..++++++++++|+|+ |++|++++++|+.
T Consensus 107 ~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~ 185 (325)
T cd08264 107 GGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKM 185 (325)
T ss_pred cceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHH
Confidence 765543 357999999999999999999999999998875 6688999987789999999999985 9999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ .+++++ +.+.++++|++.+++.. +....+.++. .++|+++|++|+. .+...+++|+++|+++.
T Consensus 186 ~G~-~v~~~~----~~~~~~~~g~~~~~~~~----~~~~~l~~~~----~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~ 251 (325)
T cd08264 186 MGA-EVIAVS----RKDWLKEFGADEVVDYD----EVEEKVKEIT----KMADVVINSLGSS-FWDLSLSVLGRGGRLVT 251 (325)
T ss_pred cCC-eEEEEe----HHHHHHHhCCCeeecch----HHHHHHHHHh----CCCCEEEECCCHH-HHHHHHHhhccCCEEEE
Confidence 999 466654 23677889988877542 1223343332 5799999999975 88999999999999999
Q ss_pred ecccC-CcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEE
Q 020928 239 IGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 316 (319)
Q Consensus 239 ~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 316 (319)
+|... ....++...+..++..+.+.... .+.++++++++...+ ..+.++|++ +++++|++.+.++...+|++
T Consensus 252 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~--~~~~~a~~~~~~~~~~~kv~ 325 (325)
T cd08264 252 FGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK----VKVWKTFKL--EEAKEALKELFSKERDGRIL 325 (325)
T ss_pred EecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC----ceeEEEEcH--HHHHHHHHHHHcCCCccccC
Confidence 98642 22344445566677777776544 456788888885332 235577888 99999999999887777753
No 81
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.1e-34 Score=256.60 Aligned_cols=278 Identities=21% Similarity=0.257 Sum_probs=225.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+..+.|.... ....|.++|||++|+|+++|+++++|++||+|++.+
T Consensus 33 i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-------------------- 90 (324)
T cd08292 33 VRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAP-------------------- 90 (324)
T ss_pred EEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecc--------------------
Confidence 5899999999999988765321 124588999999999999999999999999998641
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEEC-CCHHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARA 158 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~ 158 (319)
..|+|++|+.++...++++|+++++++++.++ ...++|++++.++++++++|||+| +|.+|++++|+|+.
T Consensus 91 --------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~ 162 (324)
T cd08292 91 --------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAA 162 (324)
T ss_pred --------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccccHHHHHHHHHHHH
Confidence 36899999999999999999999999998775 567788888778999999999997 59999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
+|+ .++++.+++++.+.++++|++.++++ ...++...+.++. .+.++|++||++|+. ....++++++++|+++.
T Consensus 163 ~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~--~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~ 236 (324)
T cd08292 163 RGI-NVINLVRRDAGVAELRALGIGPVVST--EQPGWQDKVREAA--GGAPISVALDSVGGK-LAGELLSLLGEGGTLVS 236 (324)
T ss_pred CCC-eEEEEecCHHHHHHHHhcCCCEEEcC--CCchHHHHHHHHh--CCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEE
Confidence 999 57777777888888888998887764 3345555655553 356899999999986 77889999999999999
Q ss_pred ecccC-CcccccchHHHhcCcEEEEeecc-----------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHH
Q 020928 239 IGLAK-TEMTVALTPAAAREVDVIGIFRY-----------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 306 (319)
Q Consensus 239 ~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~ 306 (319)
+|... ....+.......+++.+.++... .+.+.++++++.+|.+.+. +.+.|++ +++.+|++.+
T Consensus 237 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~--~~~~~a~~~~ 312 (324)
T cd08292 237 FGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDL--GDAAKAAAAS 312 (324)
T ss_pred EecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecH--HHHHHHHHHH
Confidence 98642 22334444456788888876542 2357789999999998543 3577888 9999999999
Q ss_pred hcCCCceEEEEe
Q 020928 307 AQGGNAIKVMFN 318 (319)
Q Consensus 307 ~~~~~~gkvvi~ 318 (319)
.++...+|++++
T Consensus 313 ~~~~~~~kvvv~ 324 (324)
T cd08292 313 MRPGRAGKVLLR 324 (324)
T ss_pred HcCCCCceEEeC
Confidence 988888999874
No 82
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.1e-34 Score=256.66 Aligned_cols=268 Identities=19% Similarity=0.224 Sum_probs=211.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++|+|+.|+..... ....|.++|.|++|+|++.|+ +|++||||++.
T Consensus 36 v~v~a~~~n~~~~~g~~~------~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~--------------------- 85 (325)
T TIGR02825 36 LEALFLSVDPYMRVAAKR------LKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS--------------------- 85 (325)
T ss_pred EEEEEEecCHHHhcccCc------CCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe---------------------
Confidence 689999999976543211 123478999999999999874 69999999852
Q ss_pred cccccCCCCCCcceeEEeecCCceEeC----CCCCChhhh-hcc-chhHHHHHHH-HhcCCCCCCeEEEEC-CCHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKL----PDNVSLEEG-AMC-EPLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVT 152 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~i----P~~~~~~~a-a~~-~~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~a 152 (319)
++|+||+.++.+.+.++ |+++++++| +++ .++.|||+++ +.+++++|++|||+| +|++|+++
T Consensus 86 ----------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~a 155 (325)
T TIGR02825 86 ----------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVV 155 (325)
T ss_pred ----------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHH
Confidence 46899999999888877 899999987 455 5789999998 558999999999998 69999999
Q ss_pred HHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcC
Q 020928 153 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP 232 (319)
Q Consensus 153 i~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~ 232 (319)
+|+|+..|+ +++++++++++.++++++|++.++++... .++.+.++.. .+.++|++||++|++ ....+++++++
T Consensus 156 iqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~~~gvdvv~d~~G~~-~~~~~~~~l~~ 229 (325)
T TIGR02825 156 GQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---SPDGYDCYFDNVGGE-FSNTVIGQMKK 229 (325)
T ss_pred HHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---CCCCeEEEEECCCHH-HHHHHHHHhCc
Confidence 999999999 68888889999999999999998886432 2333333333 246899999999986 67899999999
Q ss_pred CCEEEEecccCC-----ccc--ccchHHHhcCcEEEEeecc-------CCCHHHHHHHHHcCCCCCCCceeeeecCChhh
Q 020928 233 GGKVCLIGLAKT-----EMT--VALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKE 298 (319)
Q Consensus 233 ~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 298 (319)
+|+++.+|.... ..+ .....+.++++++.++... .+.++++++++++|++.+. ...+|++ ++
T Consensus 230 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l--~~ 305 (325)
T TIGR02825 230 FGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGF--EN 305 (325)
T ss_pred CcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccH--HH
Confidence 999999985321 111 1233466788888876532 2357789999999999544 4456777 99
Q ss_pred HHHHHHHHhcCCCceEEEEe
Q 020928 299 IEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 299 ~~~a~~~~~~~~~~gkvvi~ 318 (319)
+++|++.+++++..||+|++
T Consensus 306 ~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 306 MPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHhcCCCCCeEEeC
Confidence 99999999999999999974
No 83
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=4.4e-34 Score=253.19 Aligned_cols=268 Identities=20% Similarity=0.267 Sum_probs=212.6
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|||+.|.+...+ ..+.|.++|+|++|+|++ .+++|++||||++
T Consensus 38 Vkv~a~~in~~~~~~~~~------~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~---------------------- 86 (329)
T cd08294 38 CEALFLSVDPYMRPYSKR------LNEGDTMIGTQVAKVIES---KNSKFPVGTIVVA---------------------- 86 (329)
T ss_pred EEEEEEecCHHHhccccc------CCCCCcEecceEEEEEec---CCCCCCCCCEEEe----------------------
Confidence 689999999987653221 124689999999999985 4568999999985
Q ss_pred cccccCCCCCCcceeEEeecCC---ceEeCCCCCC--h----hhhhccchhHHHHHHH-HhcCCCCCCeEEEEC-CCHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAK---LCYKLPDNVS--L----EEGAMCEPLSVGVHAC-RRANVGPETNVMIMG-SGPIG 149 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~---~~~~iP~~~~--~----~~aa~~~~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG 149 (319)
.++|++|+.++.+ .++++|++++ + ..++...++.|||+++ +.+++++|++|||+| +|++|
T Consensus 87 ---------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG 157 (329)
T cd08294 87 ---------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVG 157 (329)
T ss_pred ---------eCCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHH
Confidence 2578999999999 9999999998 2 2232345789999998 458899999999998 69999
Q ss_pred HHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHh
Q 020928 150 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 229 (319)
Q Consensus 150 ~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~ 229 (319)
++++|+|+.+|+ .|+++++++++.++++++|++.++++. .+++.+.++++. +.++|++||++|++ .....+++
T Consensus 158 ~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~--~~~~~~~v~~~~---~~gvd~vld~~g~~-~~~~~~~~ 230 (329)
T cd08294 158 SLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYK--TVSLEEALKEAA---PDGIDCYFDNVGGE-FSSTVLSH 230 (329)
T ss_pred HHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC--CccHHHHHHHHC---CCCcEEEEECCCHH-HHHHHHHh
Confidence 999999999999 688888999999999999999988764 346666655443 46899999999985 88999999
Q ss_pred hcCCCEEEEecccCC---cc----cccchHHHhcCcEEEEeecc------CCCHHHHHHHHHcCCCCCCCceeeeecCCh
Q 020928 230 TRPGGKVCLIGLAKT---EM----TVALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQ 296 (319)
Q Consensus 230 l~~~G~~v~~g~~~~---~~----~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 296 (319)
++++|+++.+|.... .. ......+.++++++.++... .+.++++++++++|++++. ...++++
T Consensus 231 l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l-- 306 (329)
T cd08294 231 MNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGF-- 306 (329)
T ss_pred hccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCH--
Confidence 999999999884211 11 12234567788888876543 2236678899999999654 3345777
Q ss_pred hhHHHHHHHHhcCCCceEEEEeC
Q 020928 297 KEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 297 ~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
+++++|++.+.+++..||+++++
T Consensus 307 ~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 307 ENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHHHHHHHHHcCCCCCeEEEeC
Confidence 99999999999999999999975
No 84
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.2e-33 Score=250.53 Aligned_cols=298 Identities=27% Similarity=0.404 Sum_probs=241.8
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccC-ccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~ 79 (319)
||+.++++|++|+....+... ...+|.++|||++|+|+++|+++++|++||+|+..+. .+|++|.+|.++.+++|+
T Consensus 29 v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 105 (330)
T cd08245 29 IKIEACGVCHTDLHAAEGDWG---GSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQ 105 (330)
T ss_pred EEEEEEeccHHHHHHHcCCCC---CCCCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCc
Confidence 578999999999999876431 1246889999999999999999999999999987543 479999999999999999
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 158 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~ 158 (319)
+..+++. ...|+|++|+.++.+.++++|+++++++++.+. .+.+||++++..+++++++|+|+|+|.+|++++++|+.
T Consensus 106 ~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~vlI~g~g~iG~~~~~~a~~ 184 (330)
T cd08245 106 KAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGPRPGERVAVLGIGGLGHLAVQYARA 184 (330)
T ss_pred CccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHhhCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 8655433 246899999999999999999999999998764 67889999877889999999999988899999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ .++++++++++.++++++|++.+++... .+... . ...++|++||++++......++++++++|+++.
T Consensus 185 ~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~---~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~ 254 (330)
T cd08245 185 MGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQ---A----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVL 254 (330)
T ss_pred CCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHH---h----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEE
Confidence 999 6888888999999999999888765432 12111 1 124799999998876688899999999999999
Q ss_pred ecccCCc-ccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEE
Q 020928 239 IGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 316 (319)
Q Consensus 239 ~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 316 (319)
++..... ..+....+..++.++.+.... .+.++++++++.++.+.+ ..+.+++ ++++++++.+.++...+|++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~---~~~~~~~--~~~~~a~~~~~~~~~~~~~v 329 (330)
T cd08245 255 VGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKP---MIETFPL--DQANEAYERMEKGDVRFRFV 329 (330)
T ss_pred ECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcc---eEEEEcH--HHHHHHHHHHHcCCCCccee
Confidence 9854322 122234466677788777654 456788899999999853 3466777 99999999999999889987
Q ss_pred E
Q 020928 317 F 317 (319)
Q Consensus 317 i 317 (319)
+
T Consensus 330 ~ 330 (330)
T cd08245 330 L 330 (330)
T ss_pred C
Confidence 5
No 85
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.9e-33 Score=244.10 Aligned_cols=279 Identities=28% Similarity=0.385 Sum_probs=224.0
Q ss_pred CCcceEeeccCCcccc-ccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYD-QTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~-~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 79 (319)
|||.++++|++|+..+ .+..... ...+|.++|+|++|+|+.+|+++++|++||+|++.
T Consensus 24 v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------- 82 (312)
T cd08269 24 VRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL-------------------- 82 (312)
T ss_pred EEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe--------------------
Confidence 5789999999999887 5532111 12358899999999999999999999999999964
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 158 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~ 158 (319)
..|+|++|+.++.+.++++|+++ ..++.. .++.+++++++..+++++++++|+|+|.+|++++|+|+.
T Consensus 83 ---------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g~g~vg~~~~~la~~ 151 (312)
T cd08269 83 ---------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAA 151 (312)
T ss_pred ---------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 25899999999999999999998 333343 677889999888889999999999989999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|++.++++.+++++.++++++|++.+++. ...++...+.++. .+.++|++|||+|+.......+++|+++|+++.
T Consensus 152 ~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~ 227 (312)
T cd08269 152 AGARRVIAIDRRPARLALARELGATEVVTD--DSEAIVERVRELT--GGAGADVVIEAVGHQWPLDLAGELVAERGRLVI 227 (312)
T ss_pred cCCcEEEEECCCHHHHHHHHHhCCceEecC--CCcCHHHHHHHHc--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEE
Confidence 999548888888889999999999877653 3345555665543 356899999999877678899999999999999
Q ss_pred ecccC-CcccccchHHHhcCcEEEEeecc-----CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCC-
Q 020928 239 IGLAK-TEMTVALTPAAAREVDVIGIFRY-----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN- 311 (319)
Q Consensus 239 ~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~- 311 (319)
+|... ....+......++++++.++... .+.+++++++++++.+.+.....+++++ ++++++++.+++++.
T Consensus 228 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~ 305 (312)
T cd08269 228 FGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPL--EELGDAFEAARRRPDG 305 (312)
T ss_pred EccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHHhCCCC
Confidence 98543 22334445677888888776533 3568889999999998654345677888 999999999998854
Q ss_pred ceEEEE
Q 020928 312 AIKVMF 317 (319)
Q Consensus 312 ~gkvvi 317 (319)
++|+++
T Consensus 306 ~~~~~~ 311 (312)
T cd08269 306 FIKGVI 311 (312)
T ss_pred ceEEEe
Confidence 689886
No 86
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=4.4e-33 Score=246.17 Aligned_cols=283 Identities=23% Similarity=0.304 Sum_probs=225.8
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|+....|.....+....|.++|||++|+|+++|+++.++++||+|++...
T Consensus 32 v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~------------------- 92 (324)
T cd08244 32 IAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG------------------- 92 (324)
T ss_pred EEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccC-------------------
Confidence 5789999999999888775322223456789999999999999999999999999997420
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEEC-CCHHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARA 158 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~ 158 (319)
...|+|++|+.++.+.++++|+++++++++.++ .+.+||..++.++++++++++|+| +|++|++++++|+.
T Consensus 93 -------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~ 165 (324)
T cd08244 93 -------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKA 165 (324)
T ss_pred -------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHH
Confidence 136899999999999999999999999998764 667775555668999999999998 69999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ .++++++++++.++++++|++.++++. ..++...+..+. .+.++|+++|++|+. ....++++++++|+++.
T Consensus 166 ~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~ 239 (324)
T cd08244 166 AGA-TVVGAAGGPAKTALVRALGADVAVDYT--RPDWPDQVREAL--GGGGVTVVLDGVGGA-IGRAALALLAPGGRFLT 239 (324)
T ss_pred CCC-EEEEEeCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHHc--CCCCceEEEECCChH-hHHHHHHHhccCcEEEE
Confidence 999 688888889999999999988776643 334444444432 356799999999987 67889999999999999
Q ss_pred ecccCCc-ccccchHHHhcCcEEEEeecc-------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCC
Q 020928 239 IGLAKTE-MTVALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 310 (319)
Q Consensus 239 ~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 310 (319)
+|..... ..+.......+++.+.+.... .+.+.++++++.++.+. +...+.+++ +++++|++.+.++.
T Consensus 240 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~ 315 (324)
T cd08244 240 YGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLV--PVVGQTFPL--ERAAEAHAALEARS 315 (324)
T ss_pred EecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCcc--CccceEEeH--HHHHHHHHHHHcCC
Confidence 9864322 223333455778887766543 23467788999999884 346677888 99999999999999
Q ss_pred CceEEEEeC
Q 020928 311 NAIKVMFNL 319 (319)
Q Consensus 311 ~~gkvvi~~ 319 (319)
..+|+++++
T Consensus 316 ~~~kvv~~~ 324 (324)
T cd08244 316 TVGKVLLLP 324 (324)
T ss_pred CCceEEEeC
Confidence 999999864
No 87
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=7e-33 Score=242.84 Aligned_cols=270 Identities=34% Similarity=0.633 Sum_probs=221.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccC-ccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~ 79 (319)
|||.++++|++|+....+.. .....|.++|+|++|+|+++|++++.|++||+|++.+. .+|+.|++|..+.+..|+
T Consensus 31 V~v~~~~l~~~d~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 107 (306)
T cd08258 31 IKVAAAGICGSDLHIYKGDY---DPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCP 107 (306)
T ss_pred EEEEEEEechhhHHHHcCCC---CcCCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCC
Confidence 68899999999998887643 12345789999999999999999999999999998764 579999999999999998
Q ss_pred CcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHH-hcCCCCCCeEEEECCCHHHHHHHHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARA 158 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~-~~~~~~~~~vlI~G~g~vG~~ai~la~~ 158 (319)
...+++ ....|+|+||+.++...++++|+++++++|+.+.++.+||+++. .++++++++|+|.|+|.+|++++|+|+.
T Consensus 108 ~~~~~~-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~ 186 (306)
T cd08258 108 HRKGIG-TQADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKL 186 (306)
T ss_pred CCceee-ecCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 754443 23469999999999999999999999999886678889999974 4889999999998889999999999999
Q ss_pred cCCCeEEEe--cCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEE
Q 020928 159 FGAPRIIIT--DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV 236 (319)
Q Consensus 159 ~g~~~vv~v--~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~ 236 (319)
.|++ ++++ ++++++.++++++|++.+ ++ ...++...+..+. .+.++|++||++|+.......+++|+++|++
T Consensus 187 ~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~~~l~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~ 260 (306)
T cd08258 187 QGAT-VVVVGTEKDEVRLDVAKELGADAV-NG--GEEDLAELVNEIT--DGDGADVVIECSGAVPALEQALELLRKGGRI 260 (306)
T ss_pred cCCE-EEEECCCCCHHHHHHHHHhCCccc-CC--CcCCHHHHHHHHc--CCCCCCEEEECCCChHHHHHHHHHhhcCCEE
Confidence 9995 5554 345667888899998776 54 3345555555443 3567999999998766888999999999999
Q ss_pred EEecccC-CcccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcC
Q 020928 237 CLIGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG 280 (319)
Q Consensus 237 v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g 280 (319)
+.+|... ....+....++++++++.|++.. .++++++++++++|
T Consensus 261 v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 261 VQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred EEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence 9998754 23455667788899999999886 66799999998875
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=9.9e-33 Score=245.25 Aligned_cols=278 Identities=18% Similarity=0.281 Sum_probs=216.6
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||+++++|++|+..+.+... ...+|.++|+|++|+|+++|+++++|++||+|++..
T Consensus 34 Ikv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------------------- 90 (336)
T TIGR02817 34 VEVKAISVNPVDTKVRARMAP---EAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG-------------------- 90 (336)
T ss_pred EEEEEEEcChHHHHHHcCCCC---CCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcC--------------------
Confidence 689999999999988876421 234688999999999999999999999999998631
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCC-----CCeEEEEC-CCHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGP-----ETNVMIMG-SGPIGLVT 152 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~-----~~~vlI~G-~g~vG~~a 152 (319)
.....|+|++|+.++.+.++++|+++++++++.++ ...+||+++ ...++++ +++|||+| +|++|+++
T Consensus 91 -----~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~ 165 (336)
T TIGR02817 91 -----DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSIL 165 (336)
T ss_pred -----CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHH
Confidence 01236899999999999999999999999999875 678899998 4477776 99999998 59999999
Q ss_pred HHHHHHc-CCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhc
Q 020928 153 LLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231 (319)
Q Consensus 153 i~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~ 231 (319)
+|+|+.+ |+ .|+++++++++.++++++|+++++++.. ++...+.++ .+.++|+++|++++.......+++++
T Consensus 166 ~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~---~~~~~i~~~---~~~~vd~vl~~~~~~~~~~~~~~~l~ 238 (336)
T TIGR02817 166 IQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK---PLKAQLEKL---GLEAVSYVFSLTHTDQHFKEIVELLA 238 (336)
T ss_pred HHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC---CHHHHHHHh---cCCCCCEEEEcCCcHHHHHHHHHHhc
Confidence 9999998 98 6888888889999999999998887532 455555542 35679999999876668899999999
Q ss_pred CCCEEEEecccCCcccccchHHHhcCcEEEEeecc-------------CCCHHHHHHHHHcCCCCCCCceeeeec-CChh
Q 020928 232 PGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------------RSTWPLCIEFLRSGKIDVKPLITHRFG-FTQK 297 (319)
Q Consensus 232 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~ 297 (319)
++|+++.++.. ..+....+..+++.+...... ...++++++++.++.+. +.+.+.++ ++++
T Consensus 239 ~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~ 313 (336)
T TIGR02817 239 PQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIR--TTLAETFGTINAA 313 (336)
T ss_pred cCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCee--ccchhccCCCCHH
Confidence 99999987532 123333344444544432111 13467899999999884 33334444 1238
Q ss_pred hHHHHHHHHhcCCCceEEEEe
Q 020928 298 EIEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 298 ~~~~a~~~~~~~~~~gkvvi~ 318 (319)
++++|++.+.+++..||++++
T Consensus 314 ~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 314 NLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHHHHHHcCCccceEEEe
Confidence 999999999999888999875
No 89
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=5.2e-32 Score=233.02 Aligned_cols=263 Identities=34% Similarity=0.598 Sum_probs=212.3
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|+.|+....+... ....+|.++|+|++|+|+++|+++++|++||+|++.+..+|++|.+|.. +|..
T Consensus 4 i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~ 77 (271)
T cd05188 4 VRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPG 77 (271)
T ss_pred EEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCC
Confidence 689999999999999887542 1245688999999999999999999999999999999999999999997 5655
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARA 158 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~ 158 (319)
..+.+ ....|++++|+.++.+.++++|+++++++++.+ .++.+||++++. ..++++++|||+|+|++|++++++++.
T Consensus 78 ~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~ 156 (271)
T cd05188 78 GGILG-EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKA 156 (271)
T ss_pred CCEec-cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 54433 345799999999999999999999999999988 589999999866 556999999999976699999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|. +++++++++++.+.++++|++.++++. ..++...+. ...+.++|++||++++......++++++++|+++.
T Consensus 157 ~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~ 230 (271)
T cd05188 157 AGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVV 230 (271)
T ss_pred cCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEE
Confidence 997 788888999999999999988776543 234444433 22456899999999984588899999999999999
Q ss_pred ecccCCcccc-cchHHHhcCcEEEEeecc-CCCHHHHHHH
Q 020928 239 IGLAKTEMTV-ALTPAAAREVDVIGIFRY-RSTWPLCIEF 276 (319)
Q Consensus 239 ~g~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~~~~~~~~ 276 (319)
++........ .......+++.+.++... ...+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
T cd05188 231 VGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL 270 (271)
T ss_pred EccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhh
Confidence 9865433222 234466788888888765 3356665554
No 90
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=9.5e-33 Score=241.74 Aligned_cols=279 Identities=28% Similarity=0.416 Sum_probs=206.7
Q ss_pred CCcceEeeccCCcccccccccccc-ccCCCcccccceeEEE---EEeC-CCCCCCCCCCEEEEccCccCCCCccccCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANF-IVKKPMVIGHECAGII---EEVG-SEVKSLEVGDRVALEPGISCGHCSLCKAGSY 75 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~-~~~~p~i~G~e~~G~V---~~~G-~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~ 75 (319)
||+.++++||.|+.++.|...... ...+|.+.++++.|++ ...| ..+..+..||++..
T Consensus 37 i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~----------------- 99 (347)
T KOG1198|consen 37 IKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA----------------- 99 (347)
T ss_pred EEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee-----------------
Confidence 578899999999999998653322 1256655565555553 3333 22334555655543
Q ss_pred CCCCCcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-c------CCCCCCeEEEEC-CC
Q 020928 76 NLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-A------NVGPETNVMIMG-SG 146 (319)
Q Consensus 76 ~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~------~~~~~~~vlI~G-~g 146 (319)
....|+|+||+.+|...++++|+++++++||+++ ...+||.++.. . +.++|++|||+| +|
T Consensus 100 -----------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsg 168 (347)
T KOG1198|consen 100 -----------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSG 168 (347)
T ss_pred -----------ccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCc
Confidence 2358999999999999999999999999999886 78899999955 6 799999999996 69
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHH
Q 020928 147 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 226 (319)
Q Consensus 147 ~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~ 226 (319)
++|++++|+|+..|+ ..+++.+++++.++++++|++++++|.. +++.+.+++. .+.+||+||||+|+. .....
T Consensus 169 gVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~---~~~~~DvVlD~vg~~-~~~~~ 241 (347)
T KOG1198|consen 169 GVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKY---TGKGVDVVLDCVGGS-TLTKS 241 (347)
T ss_pred HHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhh---cCCCccEEEECCCCC-ccccc
Confidence 999999999999996 5666779999999999999999999865 4555444433 367999999999987 66777
Q ss_pred HHhhcCCCEEEEecccCC---ccccc-chHHHhcCcEEEE----------e-e-ccCCCHHHHHHHHHcCCCCCCCceee
Q 020928 227 LNATRPGGKVCLIGLAKT---EMTVA-LTPAAAREVDVIG----------I-F-RYRSTWPLCIEFLRSGKIDVKPLITH 290 (319)
Q Consensus 227 ~~~l~~~G~~v~~g~~~~---~~~~~-~~~~~~~~~~i~~----------~-~-~~~~~~~~~~~~~~~g~~~~~~~~~~ 290 (319)
..++..+|+...++..+. ..... ... ..+.+++.. . . ...+.++.+.++++++++ +|.+.+
T Consensus 242 ~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gki--kp~i~~ 318 (347)
T KOG1198|consen 242 LSCLLKGGGGAYIGLVGDELANYKLDDLWQ-SANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKI--KPVIDS 318 (347)
T ss_pred hhhhccCCceEEEEeccccccccccccchh-hhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcc--cCCcce
Confidence 788888876554443221 11111 000 011111111 0 1 115568899999999977 888889
Q ss_pred eecCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 291 RFGFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 291 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
.|++ +++++|++.+.++...||+++++
T Consensus 319 ~~p~--~~~~ea~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 319 VYPF--SQAKEAFEKLEKSHATGKVVLEK 345 (347)
T ss_pred eeeH--HHHHHHHHHHhhcCCcceEEEEe
Confidence 9999 99999999999999999999863
No 91
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=4.9e-32 Score=241.31 Aligned_cols=283 Identities=21% Similarity=0.246 Sum_probs=219.9
Q ss_pred CCcceEeeccCCccccccccccccc--cCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFI--VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC 78 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~--~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ 78 (319)
|||.++|+|++|+..+.|....... ...|.++|||++|+|+++|+++.+|++||+|++..
T Consensus 34 v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~------------------ 95 (341)
T cd08290 34 VKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLR------------------ 95 (341)
T ss_pred EEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecC------------------
Confidence 5889999999999988775321110 12678999999999999999999999999999641
Q ss_pred CCcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHHHH
Q 020928 79 PEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLA 155 (319)
Q Consensus 79 ~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~l 155 (319)
...|+|++|+.++.+.++++|+++++++++.++ .+.+||+++.. .+++++++|||+| +|++|++++|+
T Consensus 96 ---------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~ 166 (341)
T cd08290 96 ---------PGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQL 166 (341)
T ss_pred ---------CCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHH
Confidence 125899999999999999999999999998875 77889999854 7899999999998 59999999999
Q ss_pred HHHcCCCeEEEecCCh----hHHHHHHHcCCCEeeccCCC-CcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhh
Q 020928 156 ARAFGAPRIIITDVDV----QRLSIARNLGADETAKVSTD-IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 230 (319)
Q Consensus 156 a~~~g~~~vv~v~~~~----~~~~~~~~~g~~~v~~~~~~-~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l 230 (319)
|+..|++ ++++.+++ ++.++++++|++.++++... ..++...+..+. .+ ++|++||++|+. .....++++
T Consensus 167 a~~~g~~-v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~--~~-~~d~vld~~g~~-~~~~~~~~l 241 (341)
T cd08290 167 AKLLGIK-TINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAP--GG-RPKLALNCVGGK-SATELARLL 241 (341)
T ss_pred HHHcCCe-EEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHc--CC-CceEEEECcCcH-hHHHHHHHh
Confidence 9999994 55555554 67788889999988765321 013444444433 23 799999999986 677889999
Q ss_pred cCCCEEEEecccC-CcccccchHHHhcCcEEEEeecc-----------CCCHHHHHHHHHcCCCCCCCceeeee---cCC
Q 020928 231 RPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-----------RSTWPLCIEFLRSGKIDVKPLITHRF---GFT 295 (319)
Q Consensus 231 ~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~ 295 (319)
+++|+++.+|... ....+.......+++.+.+.... .+.+.++++++.++.+.+. ...++ ++
T Consensus 242 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~- 318 (341)
T cd08290 242 SPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPL- 318 (341)
T ss_pred CCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCH-
Confidence 9999999998532 22234444556788888876543 1247778999999998543 33445 77
Q ss_pred hhhHHHHHHHHhcCCCceEEEEeC
Q 020928 296 QKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 296 ~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
++++++++.+.++...+|+|++.
T Consensus 319 -~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 319 -EEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred -HHHHHHHHHHhhcCCCCeEEEeC
Confidence 99999999999998999999863
No 92
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2e-31 Score=236.67 Aligned_cols=301 Identities=27% Similarity=0.349 Sum_probs=236.3
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++|+|++|+....|.... ....|.++|||++|+|+++|+++.+|++||+|++.....|+. +.+.+|..
T Consensus 32 i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~------~~~~~~~~ 103 (336)
T cd08276 32 VRVHAVSLNYRDLLILNGRYPP--PVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLD------GPPTAEDE 103 (336)
T ss_pred EEEEEEecCHHHHHHhcCCCCC--CCCCCcccccceeEEEEEeCCCCcCCCCCCEEEEeccccccc------cccccccc
Confidence 5789999999999988764322 124688999999999999999999999999999876544433 33334433
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEECCCHHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARA 158 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~g~vG~~ai~la~~ 158 (319)
..+.+ ....|+|++|+.++.+.++++|+++++.+++.+. .+.+||+++.. .+++++++|+|+|+|++|++++++|+.
T Consensus 104 ~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~ 182 (336)
T cd08276 104 ASALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKA 182 (336)
T ss_pred ccccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHH
Confidence 22222 2347899999999999999999999999888775 67889999854 789999999999999999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ .+++++.++++.++++++|.+.+++... ..++...+..+. .+.++|++||++++. ....++++++++|+++.
T Consensus 183 ~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~--~~~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~ 257 (336)
T cd08276 183 AGA-RVIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKLT--GGRGVDHVVEVGGPG-TLAQSIKAVAPGGVISL 257 (336)
T ss_pred cCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHHc--CCCCCcEEEECCChH-HHHHHHHhhcCCCEEEE
Confidence 999 5888888889999999999888776432 134555555443 356899999999865 78899999999999999
Q ss_pred ecccCCc-ccccchHHHhcCcEEEEeecc-CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEE
Q 020928 239 IGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 316 (319)
Q Consensus 239 ~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv 316 (319)
+|..... ..........+++.+.+.... .+.+.++++++.++.+.+ ...+.+++ ++++++++.+.++...+|++
T Consensus 258 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~--~~~~~a~~~~~~~~~~~kvv 333 (336)
T cd08276 258 IGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRP--VIDRVFPF--EEAKEAYRYLESGSHFGKVV 333 (336)
T ss_pred EccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCccc--ccCcEEeH--HHHHHHHHHHHhCCCCceEE
Confidence 9864332 233344556788888887654 456888899998887743 34567788 99999999999888889999
Q ss_pred EeC
Q 020928 317 FNL 319 (319)
Q Consensus 317 i~~ 319 (319)
+++
T Consensus 334 ~~~ 336 (336)
T cd08276 334 IRV 336 (336)
T ss_pred EeC
Confidence 874
No 93
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.7e-31 Score=236.01 Aligned_cols=278 Identities=23% Similarity=0.321 Sum_probs=222.4
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|+.|+.++.+.... ....|.++|||++|+|+.+|++++++++||+|++.+
T Consensus 31 i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-------------------- 88 (323)
T cd05282 31 VRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG-------------------- 88 (323)
T ss_pred EEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC--------------------
Confidence 5889999999999988764322 234678999999999999999999999999999741
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~-g~vG~~ai~la~ 157 (319)
..|+|++|+.++...++++|+++++++++.++ ...+||+++.. .+++++++|+|+|+ |.+|++++++|+
T Consensus 89 --------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~ 160 (323)
T cd05282 89 --------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAK 160 (323)
T ss_pred --------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHH
Confidence 15899999999999999999999998888764 67788988754 77899999999985 999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
.+|+ .++++.+++++.++++++|++.++++.. .++...+.+.. .+.++|++||++|+. .....+++++++|+++
T Consensus 161 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v 234 (323)
T cd05282 161 LLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEAT--GGAGARLALDAVGGE-SATRLARSLRPGGTLV 234 (323)
T ss_pred HCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHHh--cCCCceEEEECCCCH-HHHHHHHhhCCCCEEE
Confidence 9999 5777778888889999999988877532 34444444433 356899999999987 5678899999999999
Q ss_pred EecccCCc-ccccchHHHhcCcEEEEeecc-----------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHH
Q 020928 238 LIGLAKTE-MTVALTPAAAREVDVIGIFRY-----------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 305 (319)
Q Consensus 238 ~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ 305 (319)
.+|..... ..+....+..+++.+.+.... .+.+.++++++.++.+. +...++|++ ++++++++.
T Consensus 235 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~--~~~~~a~~~ 310 (323)
T cd05282 235 NYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLT--TPVGAKFPL--EDFEEAVAA 310 (323)
T ss_pred EEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcc--cCccceecH--HHHHHHHHH
Confidence 99864332 233444444478887776543 13477788999999885 335677888 999999999
Q ss_pred HhcCCCceEEEEe
Q 020928 306 SAQGGNAIKVMFN 318 (319)
Q Consensus 306 ~~~~~~~gkvvi~ 318 (319)
+.++...+|++++
T Consensus 311 ~~~~~~~~kvv~~ 323 (323)
T cd05282 311 AEQPGRGGKVLLT 323 (323)
T ss_pred HhcCCCCceEeeC
Confidence 9998888999874
No 94
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.3e-31 Score=236.09 Aligned_cols=280 Identities=21% Similarity=0.323 Sum_probs=221.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|+.|+....+.... ....|.++|+|++|+|+++|+++.++++||+|++..
T Consensus 33 v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~-------------------- 90 (334)
T PTZ00354 33 IKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALL-------------------- 90 (334)
T ss_pred EEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEec--------------------
Confidence 5899999999999888764311 223467899999999999999999999999998631
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
.+|+|++|+.++.+.++++|+++++++++.+ .++.+||+++.. ++++++++|+|+| +|++|++++++|+
T Consensus 91 --------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~ 162 (334)
T PTZ00354 91 --------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAE 162 (334)
T ss_pred --------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 2589999999999999999999999888876 477889999855 8899999999998 6999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .++++.+++++.++++++|++.++++... .++...+.++. .+.++|++||++++. ....++++++++|+++
T Consensus 163 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~--~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i 237 (334)
T PTZ00354 163 KYGA-ATIITTSSEEKVDFCKKLAAIILIRYPDE-EGFAPKVKKLT--GEKGVNLVLDCVGGS-YLSETAEVLAVDGKWI 237 (334)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCCh-hHHHHHHHHHh--CCCCceEEEECCchH-HHHHHHHHhccCCeEE
Confidence 9999 45667788999999999999877764321 12555555443 356799999999865 8889999999999999
Q ss_pred EecccCC-ccc-ccchHHHhcCcEEEEeeccC-----------CCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHH
Q 020928 238 LIGLAKT-EMT-VALTPAAAREVDVIGIFRYR-----------STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 304 (319)
Q Consensus 238 ~~g~~~~-~~~-~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~ 304 (319)
.++.... ... +....+..+...+.++.... +.++++++++.++.+. +...+.+++ ++++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~--~~~~~~~~ 313 (334)
T PTZ00354 238 VYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIK--PIVDRTYPL--EEVAEAHT 313 (334)
T ss_pred EEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCcc--CccccEEcH--HHHHHHHH
Confidence 9985332 212 44555566666777754321 2246788889899884 345677888 99999999
Q ss_pred HHhcCCCceEEEEeC
Q 020928 305 ISAQGGNAIKVMFNL 319 (319)
Q Consensus 305 ~~~~~~~~gkvvi~~ 319 (319)
.+.++...+|+++++
T Consensus 314 ~~~~~~~~~kvvv~~ 328 (334)
T PTZ00354 314 FLEQNKNIGKVVLTV 328 (334)
T ss_pred HHHhCCCCceEEEec
Confidence 999888889999863
No 95
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2e-31 Score=233.69 Aligned_cols=265 Identities=23% Similarity=0.292 Sum_probs=215.2
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|+.|+++..+ ...|.++|||++|+|+++|+++.+|++||+|++..
T Consensus 31 v~v~~~~i~~~d~~~~~~-------~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-------------------- 83 (305)
T cd08270 31 VRVAAISLNRGELKFAAE-------RPDGAVPGWDAAGVVERAAADGSGPAVGARVVGLG-------------------- 83 (305)
T ss_pred EEEEEEecCHHHHHhhcc-------CCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec--------------------
Confidence 588999999999987652 13367899999999999999999999999998631
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEECC-CHHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGS-GPIGLVTLLAARA 158 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G~-g~vG~~ai~la~~ 158 (319)
..|+|++|+.++.+.++++|+++++++++.++ .+.+||+++......++++++|+|+ |++|++++++|+.
T Consensus 84 --------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~ 155 (305)
T cd08270 84 --------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAAL 155 (305)
T ss_pred --------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 26899999999999999999999999998875 6789999987644446999999985 9999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ .++.+++++++.+.++++|++..+.... ++. +.++|+++|++|+. .....+++++++|+++.
T Consensus 156 ~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----------~~~---~~~~d~vl~~~g~~-~~~~~~~~l~~~G~~v~ 220 (305)
T cd08270 156 AGA-HVVAVVGSPARAEGLRELGAAEVVVGGS----------ELS---GAPVDLVVDSVGGP-QLARALELLAPGGTVVS 220 (305)
T ss_pred cCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc----------ccc---CCCceEEEECCCcH-HHHHHHHHhcCCCEEEE
Confidence 999 6888888899999999999875543111 111 24799999999986 78899999999999999
Q ss_pred ecccCCc-ccccchHHHh--cCcEEEEeecc-----CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCC
Q 020928 239 IGLAKTE-MTVALTPAAA--REVDVIGIFRY-----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 310 (319)
Q Consensus 239 ~g~~~~~-~~~~~~~~~~--~~~~i~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 310 (319)
+|..... ..+....+.. ++..+.++... .+.+..+++++.++++.+ .+.+++++ ++++++++.+.++.
T Consensus 221 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~--~~~~~a~~~~~~~~ 296 (305)
T cd08270 221 VGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDP--RIGWRGSW--TEIDEAAEALLARR 296 (305)
T ss_pred EeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccc--eeccEEcH--HHHHHHHHHHHcCC
Confidence 9864322 2333444443 57777776543 345778999999999953 35677888 99999999999998
Q ss_pred CceEEEEeC
Q 020928 311 NAIKVMFNL 319 (319)
Q Consensus 311 ~~gkvvi~~ 319 (319)
..||+++++
T Consensus 297 ~~gkvvi~~ 305 (305)
T cd08270 297 FRGKAVLDV 305 (305)
T ss_pred CCceEEEeC
Confidence 999999875
No 96
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=1.9e-31 Score=236.16 Aligned_cols=280 Identities=23% Similarity=0.289 Sum_probs=217.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|+.+..+... ....|.++|||++|+|+.+|++++.+++||+|++.
T Consensus 33 i~v~~~gi~~~d~~~~~g~~~---~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~--------------------- 88 (327)
T PRK10754 33 VENKAIGINYIDTYIRSGLYP---PPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYA--------------------- 88 (327)
T ss_pred EEEEEEEcCHHHhhhcCCCCC---CCCCCCccCcceEEEEEEeCCCCCCCCCCCEEEEC---------------------
Confidence 588999999999988876431 12358899999999999999999999999999852
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
....|+|++|+.++...++++|+++++++++.++ ...++|+++.. ++++++++++|+| +|.+|++++|+|+
T Consensus 89 ------~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak 162 (327)
T PRK10754 89 ------QSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAK 162 (327)
T ss_pred ------CCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHH
Confidence 1135899999999999999999999999988764 66788888754 7899999999996 6999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
.+|+ .++++++++++.++++++|++.+++. ...++.+.+..+. .+.++|++||++|+. .....+++++++|+++
T Consensus 163 ~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v 236 (327)
T PRK10754 163 ALGA-KLIGTVGSAQKAQRAKKAGAWQVINY--REENIVERVKEIT--GGKKVRVVYDSVGKD-TWEASLDCLQRRGLMV 236 (327)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHCCCCEEEcC--CCCcHHHHHHHHc--CCCCeEEEEECCcHH-HHHHHHHHhccCCEEE
Confidence 9999 57788888999999999999887764 3345555555554 356899999999975 7888999999999999
Q ss_pred EecccCCc-ccccchHHHhcCc------EEEEeecc----CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHH
Q 020928 238 LIGLAKTE-MTVALTPAAAREV------DVIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 306 (319)
Q Consensus 238 ~~g~~~~~-~~~~~~~~~~~~~------~i~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~ 306 (319)
.+|..... ..+....+..++. .+.+.... .+.+.++++++.+|.+++.....++|++ ++++++++.+
T Consensus 237 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~ 314 (327)
T PRK10754 237 SFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPL--KDAQRAHEIL 314 (327)
T ss_pred EEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcH--HHHHHHHHHH
Confidence 99854322 1122222222221 11121111 1234568899999998654444577888 9999999999
Q ss_pred hcCCCceEEEEe
Q 020928 307 AQGGNAIKVMFN 318 (319)
Q Consensus 307 ~~~~~~gkvvi~ 318 (319)
+++...+|+|+.
T Consensus 315 ~~~~~~~~~~~~ 326 (327)
T PRK10754 315 ESRATQGSSLLI 326 (327)
T ss_pred HcCCCcceEEEe
Confidence 999999999985
No 97
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=4.5e-31 Score=233.94 Aligned_cols=277 Identities=21% Similarity=0.267 Sum_probs=215.7
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|++...|.... ...+|.++|||++|+|+.+|+++++|++||+|++.
T Consensus 35 i~v~~~gi~~~d~~~~~g~~~~--~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~--------------------- 91 (329)
T cd08250 35 VKNRFVGINASDINFTAGRYDP--GVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATM--------------------- 91 (329)
T ss_pred EEEEEEecCHHHHHHHhCCCCC--CCCCCcccCceeEEEEEEECCCCCCCCCCCEEEEe---------------------
Confidence 5899999999999987764321 13578899999999999999999999999999963
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARA 158 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~~ 158 (319)
..|+|++|+.++.+.++++|++. .+.++....+.+||+++.. .+++++++++|+| +|.+|++++|+|+.
T Consensus 92 --------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~ 162 (329)
T cd08250 92 --------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKL 162 (329)
T ss_pred --------cCcceeEEEEechHHeEECCCCc-chhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHH
Confidence 25899999999999999999973 3333344578899999855 7899999999998 69999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ .++++++++++.+.++++|++.+++.. ..++...+.+. .+.++|++||++|+. .....+++++++|+++.
T Consensus 163 ~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~~---~~~~vd~v~~~~g~~-~~~~~~~~l~~~g~~v~ 235 (329)
T cd08250 163 AGC-HVIGTCSSDEKAEFLKSLGCDRPINYK--TEDLGEVLKKE---YPKGVDVVYESVGGE-MFDTCVDNLALKGRLIV 235 (329)
T ss_pred cCC-eEEEEeCcHHHHHHHHHcCCceEEeCC--CccHHHHHHHh---cCCCCeEEEECCcHH-HHHHHHHHhccCCeEEE
Confidence 999 577777888888999999987776543 23444444433 246799999999974 88899999999999999
Q ss_pred ecccCCc---c------ccc-chHHHhcCcEEEEeecc------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHH
Q 020928 239 IGLAKTE---M------TVA-LTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDA 302 (319)
Q Consensus 239 ~g~~~~~---~------~~~-~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a 302 (319)
+|..... . ... ......+++.+.+.... .+.+.++++++.++.+.+.....+.+++ +++++|
T Consensus 236 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a 313 (329)
T cd08250 236 IGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGL--ESVADA 313 (329)
T ss_pred EecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCH--HHHHHH
Confidence 9854321 0 011 12234567777776432 3346778899999988653334455677 999999
Q ss_pred HHHHhcCCCceEEEEe
Q 020928 303 FEISAQGGNAIKVMFN 318 (319)
Q Consensus 303 ~~~~~~~~~~gkvvi~ 318 (319)
++.+.++...+|++++
T Consensus 314 ~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 314 VDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHcCCCCceEEeC
Confidence 9999998888999874
No 98
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.8e-31 Score=218.57 Aligned_cols=273 Identities=16% Similarity=0.143 Sum_probs=216.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeC--CCCCCCCCCCEEEEccCccCCCCccccCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVG--SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC 78 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G--~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ 78 (319)
+|+.|.+++|. ++|.+........|+-+|-..+|-++... ++...|++||.|..
T Consensus 44 l~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~-------------------- 99 (340)
T COG2130 44 LRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG-------------------- 99 (340)
T ss_pred EEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe--------------------
Confidence 46788888883 33433333345678888877665444332 56788999999986
Q ss_pred CCcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhh---ccchhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHH
Q 020928 79 PEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA---MCEPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTL 153 (319)
Q Consensus 79 ~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa---~~~~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai 153 (319)
..+|+||..++.+.+.++++..-...+. +-++..|||.+|.+ +..|+|++|+|.+ +|++|..+.
T Consensus 100 -----------~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvg 168 (340)
T COG2130 100 -----------VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVG 168 (340)
T ss_pred -----------cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHH
Confidence 3589999999999999998664333333 34689999999855 9999999999997 699999999
Q ss_pred HHHHHcCCCeEEEecCChhHHHHHHH-cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcC
Q 020928 154 LAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP 232 (319)
Q Consensus 154 ~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~ 232 (319)
|+||..|+ +||.+..+++|.+++++ +|.+.+++|.. +++...+.+. ...|+|+.||++|++ .+...+..|+.
T Consensus 169 QiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a---~P~GIDvyfeNVGg~-v~DAv~~~ln~ 241 (340)
T COG2130 169 QIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEA---CPKGIDVYFENVGGE-VLDAVLPLLNL 241 (340)
T ss_pred HHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHH---CCCCeEEEEEcCCch-HHHHHHHhhcc
Confidence 99999998 89999999999999998 99999999865 3777766554 478999999999997 99999999999
Q ss_pred CCEEEEecccC---Cc-cc---ccchHHHhcCcEEEEeecc-------CCCHHHHHHHHHcCCCCCCCceeeeecCChhh
Q 020928 233 GGKVCLIGLAK---TE-MT---VALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKE 298 (319)
Q Consensus 233 ~G~~v~~g~~~---~~-~~---~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 298 (319)
.+|+..||... .. .+ -....++.+.+.+.|+... .+..+++..|+.+|+++... +.+-++ +.
T Consensus 242 ~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGl--En 317 (340)
T COG2130 242 FARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGL--EN 317 (340)
T ss_pred ccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhh--hc
Confidence 99999999522 11 11 1223366778999998762 35678899999999997665 333478 99
Q ss_pred HHHHHHHHhcCCCceEEEEeC
Q 020928 299 IEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 299 ~~~a~~~~~~~~~~gkvvi~~ 319 (319)
+++||.-+-+++.+||+|+++
T Consensus 318 aP~Af~gLl~G~N~GK~vvKv 338 (340)
T COG2130 318 APEAFIGLLSGKNFGKLVVKV 338 (340)
T ss_pred cHHHHHHHhcCCccceEEEEe
Confidence 999999999999999999985
No 99
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.9e-31 Score=232.03 Aligned_cols=277 Identities=24% Similarity=0.333 Sum_probs=215.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+....+... ....|.++|||++|+|+++|. .++++||+|++.....
T Consensus 32 v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~----------------- 89 (320)
T cd08243 32 IRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGM----------------- 89 (320)
T ss_pred EEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCCC-----------------
Confidence 578999999999998876431 234578999999999999995 5799999998752100
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~-g~vG~~ai~la~ 157 (319)
+....|+|++|+.++...++++|+++++++++.++ ++.+||+++.. .+++++++|+|+|+ |++|++++|+|+
T Consensus 90 -----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~ 164 (320)
T cd08243 90 -----GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAK 164 (320)
T ss_pred -----CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHH
Confidence 01235899999999999999999999999888774 78899999865 77999999999985 999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .|+++.+++++.+.++++|++.++.. ..++...+.++ +.++|++||++|+. .....+++++++|+++
T Consensus 165 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~~----~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v 235 (320)
T cd08243 165 ALGA-TVTATTRSPERAALLKELGADEVVID---DGAIAEQLRAA----PGGFDKVLELVGTA-TLKDSLRHLRPGGIVC 235 (320)
T ss_pred HcCC-EEEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHHh----CCCceEEEECCChH-HHHHHHHHhccCCEEE
Confidence 9999 58888888999999999999877642 23454544444 56899999999975 8889999999999999
Q ss_pred EecccCCcccc---cchHHH--hcCcEEEEeecc---CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcC
Q 020928 238 LIGLAKTEMTV---ALTPAA--AREVDVIGIFRY---RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 309 (319)
Q Consensus 238 ~~g~~~~~~~~---~~~~~~--~~~~~i~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 309 (319)
.+|........ ...... .+++.+.++... ...+.++++++.++.+.+ ...+.+++ +++++|++.+.++
T Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l--~~~~~a~~~~~~~ 311 (320)
T cd08243 236 MTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDI--PPSKVFTF--DEIVEAHAYMESN 311 (320)
T ss_pred EEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceec--ccccEEcH--HHHHHHHHHHHhC
Confidence 99864322111 111111 456666655432 234778899999998853 35567888 9999999999988
Q ss_pred CCceEEEE
Q 020928 310 GNAIKVMF 317 (319)
Q Consensus 310 ~~~gkvvi 317 (319)
...+|+++
T Consensus 312 ~~~~kvvv 319 (320)
T cd08243 312 RAFGKVVV 319 (320)
T ss_pred CCCCcEEe
Confidence 88889886
No 100
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.98 E-value=1.5e-30 Score=231.41 Aligned_cols=285 Identities=24% Similarity=0.324 Sum_probs=213.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|+....+.. ....|.++|||++|+|+.+|+++++|++||+|++.....|+
T Consensus 31 i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~--------------- 91 (339)
T cd08249 31 VKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNP--------------- 91 (339)
T ss_pred EEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccC---------------
Confidence 57899999999998875532 12457899999999999999999999999999975322111
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCC----------CCCCeEEEECC-CH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANV----------GPETNVMIMGS-GP 147 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~----------~~~~~vlI~G~-g~ 147 (319)
....+|+|++|+.++.+.++++|+++++++++.++ ++.+||+++.. .++ +++++++|+|+ |.
T Consensus 92 -----~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~ 166 (339)
T cd08249 92 -----NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSS 166 (339)
T ss_pred -----CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhH
Confidence 01247999999999999999999999999998876 78899999853 444 78999999985 99
Q ss_pred HHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHH
Q 020928 148 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTAL 227 (319)
Q Consensus 148 vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~ 227 (319)
+|++++++|+..|+ .++++. ++++.+.++++|++.++++. ..++.+.+..+. ++++|++||++|++..+...+
T Consensus 167 vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~--~~~~~~~l~~~~---~~~~d~vl~~~g~~~~~~~~~ 239 (339)
T cd08249 167 VGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYH--DPDVVEDIRAAT---GGKLRYALDCISTPESAQLCA 239 (339)
T ss_pred HHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECC--CchHHHHHHHhc---CCCeeEEEEeeccchHHHHHH
Confidence 99999999999999 566665 56888888999998887653 345555554443 467999999999855889999
Q ss_pred HhhcC--CCEEEEecccCCcccccchHHHhcCcEEEEeec---c-----CCCHHHHHHHHHcCCCCCCCceeeeecCChh
Q 020928 228 NATRP--GGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR---Y-----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQK 297 (319)
Q Consensus 228 ~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~---~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 297 (319)
+++++ +|+++.++......... .......+....... . ...+++++++++++.+.+.+ ...+++.++
T Consensus 240 ~~l~~~~~g~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~ 316 (339)
T cd08249 240 EALGRSGGGKLVSLLPVPEETEPR-KGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VRVVEGGLE 316 (339)
T ss_pred HHHhccCCCEEEEecCCCccccCC-CCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ceecCCcHH
Confidence 99999 99999998643321111 111111111111110 1 23466788999999986543 344561139
Q ss_pred hHHHHHHHHhcCC-CceEEEEeC
Q 020928 298 EIEDAFEISAQGG-NAIKVMFNL 319 (319)
Q Consensus 298 ~~~~a~~~~~~~~-~~gkvvi~~ 319 (319)
++++|++.+.+++ ..+|+|+++
T Consensus 317 ~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 317 GVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHHHHCCCccceEEEEeC
Confidence 9999999999998 899999874
No 101
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.98 E-value=3.3e-30 Score=225.37 Aligned_cols=279 Identities=22% Similarity=0.358 Sum_probs=218.0
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++++|+.|+..+.+.... ...+|.++|+|++|+|+++|+++.+|++||+|++..
T Consensus 12 v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-------------------- 69 (303)
T cd08251 12 IQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGT-------------------- 69 (303)
T ss_pred EEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEec--------------------
Confidence 5789999999999998765321 235688999999999999999999999999998742
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHhcCCCCCCeEEEEC-CCHHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARA 158 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~ 158 (319)
....|+|++|+.++.+.++++|+++++++++.++ .+.+||++++..+++++++++|+| +|++|++++|+++.
T Consensus 70 ------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~ 143 (303)
T cd08251 70 ------GESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARL 143 (303)
T ss_pred ------CCCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHH
Confidence 1236899999999999999999999999998875 778899999888999999999986 79999999999999
Q ss_pred cCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 020928 159 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 159 ~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
.|+ .++++++++++.++++++|++.+++.. ..++...+..+. .+.++|+++|++++. .....+++++++|+++.
T Consensus 144 ~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~ 217 (303)
T cd08251 144 KGA-EIYATASSDDKLEYLKQLGVPHVINYV--EEDFEEEIMRLT--GGRGVDVVINTLSGE-AIQKGLNCLAPGGRYVE 217 (303)
T ss_pred cCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC--CccHHHHHHHHc--CCCCceEEEECCcHH-HHHHHHHHhccCcEEEE
Confidence 999 688888888899999999998887643 335555555443 356799999999864 78889999999999999
Q ss_pred ecccCCc--ccccchHHH----hcCcEEEEeecc-----CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHh
Q 020928 239 IGLAKTE--MTVALTPAA----AREVDVIGIFRY-----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 307 (319)
Q Consensus 239 ~g~~~~~--~~~~~~~~~----~~~~~i~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~ 307 (319)
++..+.. ..+....+. ++.+.+...... .+.+.++++++.+|.+. +...+.+++ ++++++++.+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~--~~~~~~~~~~~ 293 (303)
T cd08251 218 IAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELR--PTVSRIFPF--DDIGEAYRYLS 293 (303)
T ss_pred EeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCcc--CCCceEEcH--HHHHHHHHHHH
Confidence 8754321 112222211 112222111111 23467788899999884 335577888 99999999999
Q ss_pred cCCCceEEEE
Q 020928 308 QGGNAIKVMF 317 (319)
Q Consensus 308 ~~~~~gkvvi 317 (319)
++...+|+++
T Consensus 294 ~~~~~~~iv~ 303 (303)
T cd08251 294 DRENIGKVVV 303 (303)
T ss_pred hCCCcceEeC
Confidence 9888889874
No 102
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.98 E-value=2.9e-30 Score=228.49 Aligned_cols=282 Identities=17% Similarity=0.242 Sum_probs=209.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++|+|++|+....+. +.....+|.++|||++|+|++.| +.+|++||+|++.+..
T Consensus 32 i~v~~~~i~~~d~~~~~~~--~~~~~~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~------------------ 89 (326)
T cd08289 32 IRVAYSSVNYKDGLASIPG--GKIVKRYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSYD------------------ 89 (326)
T ss_pred EEEEEEecChHHhhhhcCC--ccccCCCCcCcccceeEEEEEcC--CCCCCCCCEEEEcccc------------------
Confidence 5889999999998765421 11123468999999999999954 5789999999975210
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh---cCC-CCCCeEEEECC-CHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR---ANV-GPETNVMIMGS-GPIGLVTLL 154 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~---~~~-~~~~~vlI~G~-g~vG~~ai~ 154 (319)
+ +....|+|+||+.++++.++++|+++++++++.++ .+.+||++++. ..+ .++++|||+|+ |++|++++|
T Consensus 90 ---~-~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~ 165 (326)
T cd08289 90 ---L-GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVS 165 (326)
T ss_pred ---c-CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHH
Confidence 0 11247999999999999999999999999998875 56678877743 333 45789999985 999999999
Q ss_pred HHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCC
Q 020928 155 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG 234 (319)
Q Consensus 155 la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G 234 (319)
+|+..|+ .++++++++++.++++++|++.++++.. .....+..+ .+.++|++||++|+. .....+++++++|
T Consensus 166 ~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~---~~~~~d~vld~~g~~-~~~~~~~~l~~~G 237 (326)
T cd08289 166 ILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE---LQEESIKPL---EKQRWAGAVDPVGGK-TLAYLLSTLQYGG 237 (326)
T ss_pred HHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh---HHHHHHHhh---ccCCcCEEEECCcHH-HHHHHHHHhhcCC
Confidence 9999999 6888888999999999999988776432 122333333 246799999999985 8889999999999
Q ss_pred EEEEecccCC-cccccchHHHhcCcEEEEeecc---CCCHHHHHHHHHcCCCC---CCCceeeeecCChhhHHHHHHHHh
Q 020928 235 KVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY---RSTWPLCIEFLRSGKID---VKPLITHRFGFTQKEIEDAFEISA 307 (319)
Q Consensus 235 ~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~a~~~~~ 307 (319)
+++.+|.... ..+.....++.+++.+.+.... .....++++.+.. .+. ..+.+.+++++ +++++|++.+.
T Consensus 238 ~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l--~~~~~a~~~~~ 314 (326)
T cd08289 238 SVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLAT-DLKPTQLLNEIKQEITL--DELPEALKQIL 314 (326)
T ss_pred EEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHh-hcCccccccccceEeeH--HHHHHHHHHHh
Confidence 9999986432 2233344555788888886432 1223334444332 221 12234678888 99999999999
Q ss_pred cCCCceEEEEeC
Q 020928 308 QGGNAIKVMFNL 319 (319)
Q Consensus 308 ~~~~~gkvvi~~ 319 (319)
+++..||+++++
T Consensus 315 ~~~~~gkvvv~~ 326 (326)
T cd08289 315 QGRVTGRTVVKL 326 (326)
T ss_pred cCcccceEEEeC
Confidence 999999999875
No 103
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.98 E-value=7.1e-30 Score=225.80 Aligned_cols=280 Identities=18% Similarity=0.264 Sum_probs=210.6
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|+..+.|.. .....+|.++|||++|+|+++ +++.|++||+|++...
T Consensus 32 v~v~~~~i~~~d~~~~~g~~--~~~~~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~------------------- 88 (325)
T cd05280 32 IRVHYSSLNYKDALAATGNG--GVTRNYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGY------------------- 88 (325)
T ss_pred EEEEEeecChHHHHHhcCCC--CCCCCCCCccCcccEEEEEEe--CCCCCCCCCEEEEccc-------------------
Confidence 58899999999999987743 112346889999999999999 5678999999997421
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh---cCCC-CCCeEEEECC-CHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR---ANVG-PETNVMIMGS-GPIGLVTLL 154 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~---~~~~-~~~~vlI~G~-g~vG~~ai~ 154 (319)
.. +....|+|+||+.++++.++++|+++++++|+.++ .+.++|++++. .+++ .+++|+|+|+ |++|++++|
T Consensus 89 --~~-g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~ 165 (325)
T cd05280 89 --DL-GMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVA 165 (325)
T ss_pred --cc-CCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHH
Confidence 00 11236899999999999999999999999999875 56788888754 3445 4579999985 999999999
Q ss_pred HHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCC
Q 020928 155 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG 234 (319)
Q Consensus 155 la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G 234 (319)
+|+..|+ .|++++++++++++++++|++.+++... ......+.. .+.++|++||++|+. .+...+++++++|
T Consensus 166 ~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~g 237 (325)
T cd05280 166 ILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED----LLDESKKPL--LKARWAGAIDTVGGD-VLANLLKQTKYGG 237 (325)
T ss_pred HHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh----HHHHHHHHh--cCCCccEEEECCchH-HHHHHHHhhcCCC
Confidence 9999999 5888889999999999999988776421 111121221 245799999999985 8899999999999
Q ss_pred EEEEecccCC-cccccchHHHhcCcEEEEeecc--C-CC----HHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHH
Q 020928 235 KVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY--R-ST----WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 306 (319)
Q Consensus 235 ~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~--~-~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~ 306 (319)
+++.+|.... +..+....+..+++.+.+.... . +. ++.+.+++.++.. +.+..+|++ ++++++++.+
T Consensus 238 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~a~~~~ 312 (325)
T cd05280 238 VVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLL---EIVVREISL--EELPEAIDRL 312 (325)
T ss_pred EEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCc---cceeeEecH--HHHHHHHHHH
Confidence 9999986432 2233334444678888775543 1 12 2334444455532 235677888 9999999999
Q ss_pred hcCCCceEEEEeC
Q 020928 307 AQGGNAIKVMFNL 319 (319)
Q Consensus 307 ~~~~~~gkvvi~~ 319 (319)
.+++..||+++++
T Consensus 313 ~~~~~~gk~vv~~ 325 (325)
T cd05280 313 LAGKHRGRTVVKI 325 (325)
T ss_pred hcCCcceEEEEeC
Confidence 9999999999874
No 104
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.98 E-value=4.6e-30 Score=226.90 Aligned_cols=279 Identities=19% Similarity=0.293 Sum_probs=210.8
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|++.+.|... ...+.|.++|||++|+|+. .++.+|++||+|++....
T Consensus 31 v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~------------------ 88 (323)
T TIGR02823 31 IKVAYSSLNYKDALAITGKGG--VVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYG------------------ 88 (323)
T ss_pred EEEEEEEcCHHHHHHHcCCCC--CCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccCC------------------
Confidence 689999999999998877431 1134588999999999998 567789999999974210
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHH---hcCCCCCC-eEEEECC-CHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR---RANVGPET-NVMIMGS-GPIGLVTLL 154 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~---~~~~~~~~-~vlI~G~-g~vG~~ai~ 154 (319)
+ +....|++++|+.++.+.++++|+++++++++.++ .+.+|+++++ ++.+++++ +|+|+|+ |++|+++++
T Consensus 89 ---~-~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~ 164 (323)
T TIGR02823 89 ---L-GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVA 164 (323)
T ss_pred ---C-CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHH
Confidence 0 11236899999999999999999999999998875 5667776653 35588998 9999985 999999999
Q ss_pred HHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCC
Q 020928 155 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG 234 (319)
Q Consensus 155 la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G 234 (319)
+|+.+|+ .++++++++++.++++++|++.+++... .+ ..+..+. ..++|.++|++|+. .....+++++++|
T Consensus 165 la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~~~~~---~~~~d~vld~~g~~-~~~~~~~~l~~~G 235 (323)
T TIGR02823 165 ILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED--LS--PPGKPLE---KERWAGAVDTVGGH-TLANVLAQLKYGG 235 (323)
T ss_pred HHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHHHHhc---CCCceEEEECccHH-HHHHHHHHhCCCC
Confidence 9999999 5666667777789999999987766421 11 1233232 33599999999976 7888999999999
Q ss_pred EEEEecccCC-cccccchHHHhcCcEEEEeecc---CC----CHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHH
Q 020928 235 KVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY---RS----TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 306 (319)
Q Consensus 235 ~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~ 306 (319)
+++.+|.... ........++.+++++.+.... .. .+..+.+++..+.+. +. ...+++ +++++|++.+
T Consensus 236 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~l--~~~~~a~~~~ 310 (323)
T TIGR02823 236 AVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLE--SI-TREITL--EELPEALEQI 310 (323)
T ss_pred EEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCc--Cc-eeeecH--HHHHHHHHHH
Confidence 9999986432 2222334455778888875432 11 244566666677763 33 457788 9999999999
Q ss_pred hcCCCceEEEEeC
Q 020928 307 AQGGNAIKVMFNL 319 (319)
Q Consensus 307 ~~~~~~gkvvi~~ 319 (319)
.+++..+|+++++
T Consensus 311 ~~~~~~~k~vv~~ 323 (323)
T TIGR02823 311 LAGQHRGRTVVDV 323 (323)
T ss_pred hCCCccceEEEeC
Confidence 9999999999874
No 105
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.97 E-value=1.3e-29 Score=223.66 Aligned_cols=284 Identities=27% Similarity=0.389 Sum_probs=222.4
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++++|++|+....|.... ....|+++|||++|+|+++|+++.+|++||+|++....
T Consensus 32 i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~------------------ 91 (325)
T cd08253 32 VRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLG------------------ 91 (325)
T ss_pred EEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccc------------------
Confidence 5789999999999988764321 23578899999999999999999999999999975210
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
.....|++++|+.++...++++|+++++++++.+. ++.+||+++.. .+++++++++|+| +|++|++++++++
T Consensus 92 -----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~ 166 (325)
T cd08253 92 -----WGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLAR 166 (325)
T ss_pred -----cCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 01136899999999999999999999999988774 78889999865 8899999999998 5999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .++++++++++.+.++++|++.+++.. ..++...+..+. .+.++|+++|++++. .....+++++++|+++
T Consensus 167 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v 240 (325)
T cd08253 167 WAGA-RVIATASSAEGAELVRQAGADAVFNYR--AEDLADRILAAT--AGQGVDVIIEVLANV-NLAKDLDVLAPGGRIV 240 (325)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC--CcCHHHHHHHHc--CCCceEEEEECCchH-HHHHHHHhhCCCCEEE
Confidence 9998 688888888999999999988776642 334444444443 245799999999986 6788899999999999
Q ss_pred EecccCCcccccchHHHhcCcEEEEeecc-------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCC
Q 020928 238 LIGLAKTEMTVALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 310 (319)
Q Consensus 238 ~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 310 (319)
.++.......+....+..++..+.+...+ .+.+..+.+++.++.+. +.....+++ ++++++++.+.++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~--~~~~~~~~~~~~~~ 316 (325)
T cd08253 241 VYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALR--PVIAREYPL--EEAAAAHEAVESGG 316 (325)
T ss_pred EEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCcc--CccccEEcH--HHHHHHHHHHHcCC
Confidence 99864432333444445566666655433 12355666778888774 345567788 99999999999998
Q ss_pred CceEEEEeC
Q 020928 311 NAIKVMFNL 319 (319)
Q Consensus 311 ~~gkvvi~~ 319 (319)
..+|+++++
T Consensus 317 ~~~kvv~~~ 325 (325)
T cd08253 317 AIGKVVLDP 325 (325)
T ss_pred CcceEEEeC
Confidence 999999864
No 106
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=1e-29 Score=219.87 Aligned_cols=247 Identities=28% Similarity=0.404 Sum_probs=197.2
Q ss_pred cccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCCcccccCCCCCCcceeEEeecCCc
Q 020928 24 FIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 103 (319)
Q Consensus 24 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~ 103 (319)
++.++|.++|||++|+|+++|+++++|++||+|++. ++|++|+.++.+.
T Consensus 16 ~~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~ 64 (277)
T cd08255 16 EKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPANL 64 (277)
T ss_pred ccCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCHHH
Confidence 456789999999999999999999999999999863 4689999999999
Q ss_pred eEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcC-C
Q 020928 104 CYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-A 182 (319)
Q Consensus 104 ~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g-~ 182 (319)
++++|+++++++++.+.++.+||++++.++++++++++|+|+|++|++++++|+.+|+++|+++++++++.++++++| +
T Consensus 65 ~~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~ 144 (277)
T cd08255 65 LVPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPA 144 (277)
T ss_pred eeECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCC
Confidence 999999999999887777888999988889999999999999999999999999999955888889999999999998 4
Q ss_pred CEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEecccCCcccccchHHHhcCcEEEE
Q 020928 183 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 262 (319)
Q Consensus 183 ~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 262 (319)
+.++.+.. .. ..+.++|++||+++........+++++++|+++.+|............+..+.+.+.+
T Consensus 145 ~~~~~~~~----------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 212 (277)
T cd08255 145 DPVAADTA----------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRS 212 (277)
T ss_pred ccccccch----------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEe
Confidence 44433211 01 1256799999999877688899999999999999986443311111234445555554
Q ss_pred eecc-------------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcC-CCceEEEE
Q 020928 263 IFRY-------------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMF 317 (319)
Q Consensus 263 ~~~~-------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gkvvi 317 (319)
.... .+.++++++++.++.+. +...+.+++ +++++|++.++++ ....|+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 213 SQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE--ALITHRVPF--EDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred ecccccccccccccccccccHHHHHHHHHcCCcc--ccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence 4321 25688999999999874 345566778 9999999999877 56677764
No 107
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.97 E-value=1.4e-29 Score=222.84 Aligned_cols=276 Identities=27% Similarity=0.342 Sum_probs=218.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|+....+.. +..+|.++|||++|+|+.+|+++.+|++||+|++..
T Consensus 31 i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~-------------------- 86 (320)
T cd05286 31 VRNTAIGVNFIDTYFRSGLY----PLPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG-------------------- 86 (320)
T ss_pred EEEEEeecCHHHHHHhcCCC----CCCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec--------------------
Confidence 57899999999998877643 224578999999999999999999999999998631
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHH-hcCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
..|++++|+.++.+.++++|+++++++++.+ ....++++++. ..+++++++|+|+| +|++|++++++|+
T Consensus 87 --------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~ 158 (320)
T cd05286 87 --------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAK 158 (320)
T ss_pred --------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 2589999999999999999999999988876 46778888885 48899999999998 6999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
.+|+ .+++++.++++.++++++|++.++.. ...++...+..+. .+.++|.+|||+++. .....+++++++|+++
T Consensus 159 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v 232 (320)
T cd05286 159 ALGA-TVIGTVSSEEKAELARAAGADHVINY--RDEDFVERVREIT--GGRGVDVVYDGVGKD-TFEGSLDSLRPRGTLV 232 (320)
T ss_pred HcCC-EEEEEcCCHHHHHHHHHCCCCEEEeC--CchhHHHHHHHHc--CCCCeeEEEECCCcH-hHHHHHHhhccCcEEE
Confidence 9999 67888888899999999998877653 2234445554443 356799999999985 8889999999999999
Q ss_pred EecccCCc-ccccchHHHhcCcEEEEeecc---------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHh
Q 020928 238 LIGLAKTE-MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 307 (319)
Q Consensus 238 ~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~ 307 (319)
.+|..... ..+....+..+++.+.+.... .+.+.++++++.++.+.+. ..+.|++ ++++++++.+.
T Consensus 233 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~--~~~~~a~~~~~ 308 (320)
T cd05286 233 SFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPL--ADAAQAHRDLE 308 (320)
T ss_pred EEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcH--HHHHHHHHHHH
Confidence 99864332 122333333667776543221 2235568888989888543 4566788 99999999999
Q ss_pred cCCCceEEEEe
Q 020928 308 QGGNAIKVMFN 318 (319)
Q Consensus 308 ~~~~~gkvvi~ 318 (319)
++...+|++++
T Consensus 309 ~~~~~~~vv~~ 319 (320)
T cd05286 309 SRKTTGKLLLI 319 (320)
T ss_pred cCCCCceEEEe
Confidence 98888999885
No 108
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.97 E-value=1.2e-29 Score=225.42 Aligned_cols=279 Identities=18% Similarity=0.284 Sum_probs=217.0
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++++|++|+....+... ..+.|.++|||++|+|+++|+++.+|++||+|++..
T Consensus 35 v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-------------------- 91 (336)
T cd08252 35 VRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAG-------------------- 91 (336)
T ss_pred EEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcC--------------------
Confidence 578999999999988765321 124678999999999999999999999999998631
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCC-----CCeEEEEC-CCHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGP-----ETNVMIMG-SGPIGLVT 152 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~-----~~~vlI~G-~g~vG~~a 152 (319)
.....|+|++|+.++...++++|+++++++++.++ .+.++|+++ +.+.+.+ +++|+|+| +|++|+++
T Consensus 92 -----~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~ 166 (336)
T cd08252 92 -----DITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIA 166 (336)
T ss_pred -----CCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHH
Confidence 01136899999999999999999999999988775 567888887 4477777 99999998 69999999
Q ss_pred HHHHHHcC-CCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhc
Q 020928 153 LLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 231 (319)
Q Consensus 153 i~la~~~g-~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~ 231 (319)
+|+|+.+| + .++++++++++.++++++|++.+++.. .++...+... .+.++|++||++|+......++++++
T Consensus 167 ~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~i~~~---~~~~~d~vl~~~~~~~~~~~~~~~l~ 239 (336)
T cd08252 167 IQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHH---QDLAEQLEAL---GIEPVDYIFCLTDTDQHWDAMAELIA 239 (336)
T ss_pred HHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC---ccHHHHHHhh---CCCCCCEEEEccCcHHHHHHHHHHhc
Confidence 99999999 7 788888888899999999998877643 1444444322 34579999999997668899999999
Q ss_pred CCCEEEEecccCCcccccchHHHhcCcEEEEeecc-------------CCCHHHHHHHHHcCCCCCCCc-eeeeecCChh
Q 020928 232 PGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------------RSTWPLCIEFLRSGKIDVKPL-ITHRFGFTQK 297 (319)
Q Consensus 232 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~ 297 (319)
++|+++.+|... ..+....+..+++.+.+.... .+.+.++++++.+|.+.+.+. ....+++ +
T Consensus 240 ~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~ 315 (336)
T cd08252 240 PQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA--E 315 (336)
T ss_pred CCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH--H
Confidence 999999998542 233333444566666653321 123667889999998853321 1133566 9
Q ss_pred hHHHHHHHHhcCCCceEEEEe
Q 020928 298 EIEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 298 ~~~~a~~~~~~~~~~gkvvi~ 318 (319)
++++|++.+.++...+|++++
T Consensus 316 ~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 316 NLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHHHHHHHHcCCccceEEeC
Confidence 999999999999899999874
No 109
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=2.7e-29 Score=224.55 Aligned_cols=288 Identities=19% Similarity=0.246 Sum_probs=209.3
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCC-CCCCCCEEEEccCccCCCCccccCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVK-SLEVGDRVALEPGISCGHCSLCKAGSYNLCP 79 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 79 (319)
|||.++++|++|+..+.+.. ......|.++|+|++|+|+++|++++ +|++||+|++....+
T Consensus 33 I~v~~~~~~~~d~~~~~~~~--~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~---------------- 94 (352)
T cd08247 33 VKVHAAALNPVDLKLYNSYT--FHFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHP---------------- 94 (352)
T ss_pred EEEEEEecChHhHHHhcccc--cccccCCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCC----------------
Confidence 58999999999998775311 11112478999999999999999998 899999999753211
Q ss_pred CcccccCCCCCCcceeEEeecCC----ceEeCCCCCChhhhhccc-hhHHHHHHHHh-c-CCCCCCeEEEECC-CHHHHH
Q 020928 80 EMRFFGSPPTNGSLAHKVVHPAK----LCYKLPDNVSLEEGAMCE-PLSVGVHACRR-A-NVGPETNVMIMGS-GPIGLV 151 (319)
Q Consensus 80 ~~~~~~~~~~~g~~~e~~~~~~~----~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~-~~~~~~~vlI~G~-g~vG~~ 151 (319)
....|+|++|+.++.. .++++|+++++++++.++ .+.+||+++.. . ++++|++++|+|+ |.+|++
T Consensus 95 -------~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~ 167 (352)
T cd08247 95 -------YGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRF 167 (352)
T ss_pred -------CCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHH
Confidence 1136899999999987 789999999999999875 67889999866 4 6999999999985 899999
Q ss_pred HHHHHHHcCC-CeEEEecCChhHHHHHHHcCCCEeeccCCCCc-chhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHh
Q 020928 152 TLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIE-DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 229 (319)
Q Consensus 152 ai~la~~~g~-~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~ 229 (319)
++|+|+.+|. +.++++.+ +++.++++++|++.++++..... .+...+.... ..+.++|++|||+|+......++++
T Consensus 168 ~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~ 245 (352)
T cd08247 168 AIQLAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLKPVLENV-KGQGKFDLILDCVGGYDLFPHINSI 245 (352)
T ss_pred HHHHHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHHHHHHhh-cCCCCceEEEECCCCHHHHHHHHHH
Confidence 9999998754 35666654 55556778899988876533210 0323322221 1256899999999986578889999
Q ss_pred hc---CCCEEEEec-ccCCccc-----------c----cchHHHhcCcEEEEeecc--CCCHHHHHHHHHcCCCCCCCce
Q 020928 230 TR---PGGKVCLIG-LAKTEMT-----------V----ALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLI 288 (319)
Q Consensus 230 l~---~~G~~v~~g-~~~~~~~-----------~----~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~g~~~~~~~~ 288 (319)
++ ++|+++.++ ....+.. . ......+...++...... .+.+.++++++.++.+. +..
T Consensus 246 l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~ 323 (352)
T cd08247 246 LKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVK--PPI 323 (352)
T ss_pred hCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeE--eee
Confidence 99 999999874 2211100 0 011222334443332211 23577889999999884 445
Q ss_pred eeeecCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 289 THRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 289 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
.+++++ +++++|++.+++++..||+++++
T Consensus 324 ~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 324 DSVYPF--EDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred ccEecH--HHHHHHHHHHHcCCCCCcEEEeC
Confidence 677888 99999999999998899999874
No 110
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.97 E-value=3.7e-29 Score=220.38 Aligned_cols=277 Identities=27% Similarity=0.376 Sum_probs=219.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|+.|+....+... .....|.++|||++|+|+++|+++.++++||+|++.
T Consensus 32 v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~--------------------- 88 (323)
T cd05276 32 IRVAAAGVNRADLLQRQGLYP--PPPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCAL--------------------- 88 (323)
T ss_pred EEEEEeecCHHHHHHhCCCCC--CCCCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEe---------------------
Confidence 588999999999988765431 123467899999999999999999999999999863
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
..+|+|++|+.++.+.++++|+++++++++.+ .++.++|+++.. ..++++++++|+| +|++|++++++++
T Consensus 89 -------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~ 161 (323)
T cd05276 89 -------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAK 161 (323)
T ss_pred -------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHH
Confidence 12589999999999999999999999888876 478889999754 7899999999998 5999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .++++++++++.+.++++|.+.+++. ...++...+.++. .+.++|++||+.|+. .....+++++++|+++
T Consensus 162 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~g~~-~~~~~~~~~~~~g~~i 235 (323)
T cd05276 162 ALGA-RVIATAGSEEKLEACRALGADVAINY--RTEDFAEEVKEAT--GGRGVDVILDMVGGD-YLARNLRALAPDGRLV 235 (323)
T ss_pred HcCC-EEEEEcCCHHHHHHHHHcCCCEEEeC--CchhHHHHHHHHh--CCCCeEEEEECCchH-HHHHHHHhhccCCEEE
Confidence 9999 58888888888888888998776653 2234444554443 246799999999986 5788899999999999
Q ss_pred EecccCC-cccccchHHHhcCcEEEEeeccC-----------CCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHH
Q 020928 238 LIGLAKT-EMTVALTPAAAREVDVIGIFRYR-----------STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 305 (319)
Q Consensus 238 ~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ 305 (319)
.++.... ........++.+++.+.++.... +.+.++++++.++++. +...+.|++ ++++++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~a~~~ 311 (323)
T cd05276 236 LIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIR--PVIDKVFPL--EEAAEAHRR 311 (323)
T ss_pred EEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCcc--CCcceEEcH--HHHHHHHHH
Confidence 9985432 22333444456788887765431 1246678888888884 445677888 999999999
Q ss_pred HhcCCCceEEEE
Q 020928 306 SAQGGNAIKVMF 317 (319)
Q Consensus 306 ~~~~~~~gkvvi 317 (319)
+.++...+|+++
T Consensus 312 ~~~~~~~~kvv~ 323 (323)
T cd05276 312 MESNEHIGKIVL 323 (323)
T ss_pred HHhCCCcceEeC
Confidence 998888888874
No 111
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=2.4e-29 Score=218.06 Aligned_cols=271 Identities=25% Similarity=0.383 Sum_probs=212.4
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|++...+.. ..|.++|||++|+|+.+|+++++|++||+|++.
T Consensus 2 i~v~~~~i~~~d~~~~~g~~------~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~--------------------- 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLL------PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL--------------------- 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCC------CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE---------------------
Confidence 68999999999999887632 236889999999999999999999999999863
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
..|+|+||+.++.+.++++|+++++++++.+. ...++|+++ +...++++++|+|+| +|.+|++++++|+
T Consensus 55 --------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~ 126 (288)
T smart00829 55 --------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQ 126 (288)
T ss_pred --------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHH
Confidence 25899999999999999999999999998875 678899888 558899999999998 6999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCC--CEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK 235 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~ 235 (319)
..|+ .++++++++++.+.++++|+ +.++++ ...++...+.... .+.++|.++|++++ ......+++++++|+
T Consensus 127 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~ 200 (288)
T smart00829 127 HLGA-EVFATAGSPEKRDFLRELGIPDDHIFSS--RDLSFADEILRAT--GGRGVDVVLNSLAG-EFLDASLRCLAPGGR 200 (288)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHcCCChhheeeC--CCccHHHHHHHHh--CCCCcEEEEeCCCH-HHHHHHHHhccCCcE
Confidence 9999 68888888999999999997 566553 2334545544433 24579999999996 478889999999999
Q ss_pred EEEecccCCc--ccccchHHHhcCcEEEEeecc---------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHH
Q 020928 236 VCLIGLAKTE--MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 304 (319)
Q Consensus 236 ~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~ 304 (319)
++.++..... ....... ..+++.+.+.... .+.+.++++++.++++.+ ...+.|++ ++++++++
T Consensus 201 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~ 275 (288)
T smart00829 201 FVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP--LPVTVFPI--SDVEDAFR 275 (288)
T ss_pred EEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC--cCceEEcH--HHHHHHHH
Confidence 9999854311 1222222 2334444443211 224667888888898853 24466788 99999999
Q ss_pred HHhcCCCceEEEE
Q 020928 305 ISAQGGNAIKVMF 317 (319)
Q Consensus 305 ~~~~~~~~gkvvi 317 (319)
.+..+...+|+++
T Consensus 276 ~~~~~~~~~~ivv 288 (288)
T smart00829 276 YMQQGKHIGKVVL 288 (288)
T ss_pred HHhcCCCcceEeC
Confidence 9998877788774
No 112
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.97 E-value=1.9e-29 Score=223.45 Aligned_cols=273 Identities=18% Similarity=0.165 Sum_probs=210.0
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|.....+......+...+.++|+|++|+|+++|++ +|++||+|++
T Consensus 37 Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~---------------------- 92 (329)
T cd05288 37 VRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG---------------------- 92 (329)
T ss_pred EEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec----------------------
Confidence 6899999999887655543211111223568999999999999964 7999999985
Q ss_pred cccccCCCCCCcceeEEeecC-CceEeCCCCCC--hhhhhc-c-chhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPA-KLCYKLPDNVS--LEEGAM-C-EPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTL 153 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~-~~~~~iP~~~~--~~~aa~-~-~~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai 153 (319)
.++|++|+.++. +.++++|++++ +++++. + .++.+||+++.. +++.++++|||+| +|++|++++
T Consensus 93 ---------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~ 163 (329)
T cd05288 93 ---------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVG 163 (329)
T ss_pred ---------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHH
Confidence 258999999999 99999999985 444433 4 578899999854 7899999999998 699999999
Q ss_pred HHHHHcCCCeEEEecCChhHHHHHHH-cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcC
Q 020928 154 LAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP 232 (319)
Q Consensus 154 ~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~ 232 (319)
|+|+..|+ .++++++++++.+.+++ +|++.++++. ..++...+.++. +.++|++||++|+. .+...++++++
T Consensus 164 ~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~v~~~~---~~~~d~vi~~~g~~-~~~~~~~~l~~ 236 (329)
T cd05288 164 QIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYK--TPDLAEALKEAA---PDGIDVYFDNVGGE-ILDAALTLLNK 236 (329)
T ss_pred HHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecC--ChhHHHHHHHhc---cCCceEEEEcchHH-HHHHHHHhcCC
Confidence 99999999 68888888999999988 9998877653 234555554443 35799999999975 88899999999
Q ss_pred CCEEEEecccCCccc------ccchHHHhcCcEEEEeecc------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHH
Q 020928 233 GGKVCLIGLAKTEMT------VALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIE 300 (319)
Q Consensus 233 ~G~~v~~g~~~~~~~------~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 300 (319)
+|+++.+|....... ........+++.+.+.... .+.+.++++++.++.+++.+ ...+++ ++++
T Consensus 237 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l--~~~~ 312 (329)
T cd05288 237 GGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGL--ENAP 312 (329)
T ss_pred CceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccH--HHHH
Confidence 999999985432211 1233455678888776543 23467788999999986543 344677 9999
Q ss_pred HHHHHHhcCCCceEEEE
Q 020928 301 DAFEISAQGGNAIKVMF 317 (319)
Q Consensus 301 ~a~~~~~~~~~~gkvvi 317 (319)
++++.+.++...+|+++
T Consensus 313 ~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 313 EAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHhcCCCccceeC
Confidence 99999998888888874
No 113
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=4.5e-29 Score=223.00 Aligned_cols=279 Identities=25% Similarity=0.354 Sum_probs=208.6
Q ss_pred CCcceEeeccCCcccccccccc-------c-----cccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCc
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCA-------N-----FIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCS 68 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~-------~-----~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~ 68 (319)
|||.++++|++|+.+..|...+ . ...+.|.++|||++|+|+.+|+++.+|++||||++.+.
T Consensus 34 v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~------- 106 (350)
T cd08248 34 IKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVP------- 106 (350)
T ss_pred EEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccCCCCCEEEEecC-------
Confidence 5899999999999988763210 0 02356889999999999999999999999999997421
Q ss_pred cccCCCCCCCCCcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCC----CCCeEEE
Q 020928 69 LCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVG----PETNVMI 142 (319)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~----~~~~vlI 142 (319)
....|+|++|+.++.+.++++|+++++++++.++ .+.++|+++.. ..+. ++++++|
T Consensus 107 ------------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI 168 (350)
T cd08248 107 ------------------PWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLI 168 (350)
T ss_pred ------------------CCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEE
Confidence 1136899999999999999999999999988775 77889998854 5564 4999999
Q ss_pred EC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChH
Q 020928 143 MG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 221 (319)
Q Consensus 143 ~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~ 221 (319)
+| +|++|++++++|+..|+ .++++.++ ++.+.++++|.+.+++.. ..++... +.. ..++|++||++|+.
T Consensus 169 ~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~--~~~~~~~---l~~--~~~vd~vi~~~g~~- 238 (350)
T cd08248 169 LGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGADDVIDYN--NEDFEEE---LTE--RGKFDVILDTVGGD- 238 (350)
T ss_pred ECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCCceEEECC--ChhHHHH---HHh--cCCCCEEEECCChH-
Confidence 98 69999999999999999 46666554 577888999987776642 2233333 322 35799999999987
Q ss_pred HHHHHHHhhcCCCEEEEecccCCcc----cc----cchHHHhcCcE---------EE-Ee-eccCCCHHHHHHHHHcCCC
Q 020928 222 TMSTALNATRPGGKVCLIGLAKTEM----TV----ALTPAAAREVD---------VI-GI-FRYRSTWPLCIEFLRSGKI 282 (319)
Q Consensus 222 ~~~~~~~~l~~~G~~v~~g~~~~~~----~~----~~~~~~~~~~~---------i~-~~-~~~~~~~~~~~~~~~~g~~ 282 (319)
....++++++++|+++.++...... .. ......+.... +. +. ....+.+.++++++.++.+
T Consensus 239 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 318 (350)
T cd08248 239 TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI 318 (350)
T ss_pred HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCE
Confidence 8889999999999999998532110 11 00111111111 11 11 1113458889999999988
Q ss_pred CCCCceeeeecCChhhHHHHHHHHhcCCCceEEEEe
Q 020928 283 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 318 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~ 318 (319)
. +...+.|++ ++++++++.+.++...+|++++
T Consensus 319 ~--~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 319 K--PVIDKVFPF--EEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred e--cccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence 4 345677888 9999999999988888898874
No 114
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=9.1e-29 Score=218.48 Aligned_cols=279 Identities=27% Similarity=0.345 Sum_probs=216.7
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+....+... .....|.++|||++|+|+.+|+++.+|++||+|++... |
T Consensus 32 v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-----------~------- 91 (326)
T cd08272 32 VRVHASGVNPLDTKIRRGGAA--ARPPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAG-----------G------- 91 (326)
T ss_pred EEEEEEecCHHHHHHhCCCCC--CCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccC-----------C-------
Confidence 578999999999988766432 12345889999999999999999999999999996421 0
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
.....|+|++|+.++...++++|+++++++++.++ .+.+||+++ +..+++++++++|+| +|.+|++++++|+
T Consensus 92 -----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~ 166 (326)
T cd08272 92 -----LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAK 166 (326)
T ss_pred -----cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHH
Confidence 01236899999999999999999999999888775 678889887 558999999999998 6999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .+++++++ ++.++++++|++.+++.. .. +...+..+. .+.++|.++|++++. .....+++++++|+++
T Consensus 167 ~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~--~~-~~~~~~~~~--~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v 238 (326)
T cd08272 167 AAGA-RVYATASS-EKAAFARSLGADPIIYYR--ET-VVEYVAEHT--GGRGFDVVFDTVGGE-TLDASFEAVALYGRVV 238 (326)
T ss_pred HcCC-EEEEEech-HHHHHHHHcCCCEEEecc--hh-HHHHHHHhc--CCCCCcEEEECCChH-HHHHHHHHhccCCEEE
Confidence 9999 56777677 888888889987776532 22 444554443 356799999999985 7788999999999999
Q ss_pred EecccCCcccccchHHHhcCcEEEEeecc------------CCCHHHHHHHHHcCCCCCCCcee-eeecCChhhHHHHHH
Q 020928 238 LIGLAKTEMTVALTPAAAREVDVIGIFRY------------RSTWPLCIEFLRSGKIDVKPLIT-HRFGFTQKEIEDAFE 304 (319)
Q Consensus 238 ~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~a~~ 304 (319)
.++... . ........+++.+.+.... .+.+..+++++.++.+. +.+. +.+++ ++++++++
T Consensus 239 ~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~--~~~~~~~~ 311 (326)
T cd08272 239 SILGGA-T--HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLR--PLLDPRTFPL--EEAAAAHA 311 (326)
T ss_pred EEecCC-c--cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcc--cccccceecH--HHHHHHHH
Confidence 987543 1 1222233566666655421 23466788888888874 3333 66788 99999999
Q ss_pred HHhcCCCceEEEEeC
Q 020928 305 ISAQGGNAIKVMFNL 319 (319)
Q Consensus 305 ~~~~~~~~gkvvi~~ 319 (319)
.+.++...+|+++++
T Consensus 312 ~~~~~~~~~~vv~~~ 326 (326)
T cd08272 312 RLESGSARGKIVIDV 326 (326)
T ss_pred HHHcCCcccEEEEEC
Confidence 999888889999875
No 115
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=7e-29 Score=220.05 Aligned_cols=272 Identities=25% Similarity=0.327 Sum_probs=208.8
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+.++.+..... ..+|.++|||++|+|+.+|+++++|++||+|++..
T Consensus 32 i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~-------------------- 89 (331)
T cd08273 32 VKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALT-------------------- 89 (331)
T ss_pred EEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCccCCCCCEEEEeC--------------------
Confidence 57899999999999887653211 24688999999999999999999999999999741
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
..|+|++|+.++.+.++++|+++++++++.++ ++.+||+++.. .+++++++++|+| +|++|++++++|+
T Consensus 90 --------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~ 161 (331)
T cd08273 90 --------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELAL 161 (331)
T ss_pred --------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 24899999999999999999999999988764 78889999855 7899999999998 5999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .++.+.. +++.++++++|+.. ++. ...++... .+ .++++|++||++|+. .....+++++++|+++
T Consensus 162 ~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~--~~~~~~~~--~~---~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v 230 (331)
T cd08273 162 LAGA-EVYGTAS-ERNHAALRELGATP-IDY--RTKDWLPA--ML---TPGGVDVVFDGVGGE-SYEESYAALAPGGTLV 230 (331)
T ss_pred HcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC--CCcchhhh--hc---cCCCceEEEECCchH-HHHHHHHHhcCCCEEE
Confidence 9999 5777766 88888989999654 232 22233222 12 235799999999987 5888999999999999
Q ss_pred EecccCCccc--ccc--------------hHHHhcCcEEEEeecc--------CCCHHHHHHHHHcCCCCCCCceeeeec
Q 020928 238 LIGLAKTEMT--VAL--------------TPAAAREVDVIGIFRY--------RSTWPLCIEFLRSGKIDVKPLITHRFG 293 (319)
Q Consensus 238 ~~g~~~~~~~--~~~--------------~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~ 293 (319)
.+|....... ... .....++......... .+.+.+++++++++.+. +...++++
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~--~~~~~~~~ 308 (331)
T cd08273 231 CYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIR--PKIAKRLP 308 (331)
T ss_pred EEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCcc--CCcceEEc
Confidence 9986432211 110 0011122222222211 24577899999999884 44567788
Q ss_pred CChhhHHHHHHHHhcCCCceEEEE
Q 020928 294 FTQKEIEDAFEISAQGGNAIKVMF 317 (319)
Q Consensus 294 ~~~~~~~~a~~~~~~~~~~gkvvi 317 (319)
+ ++++++++.+.++...||+|+
T Consensus 309 ~--~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 309 L--SEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred H--HHHHHHHHHHHcCCCcceEEe
Confidence 8 999999999998888899886
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=1.7e-28 Score=216.64 Aligned_cols=279 Identities=24% Similarity=0.334 Sum_probs=219.8
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|+.|+....+.... +..+|.++|||++|+|+.+|+++.+|++||+|++.
T Consensus 32 i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~--------------------- 88 (325)
T TIGR02824 32 IRVAAAGVNRPDLLQRAGKYPP--PPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCAL--------------------- 88 (325)
T ss_pred EEEEEEecCHHHHHHhcCCCCC--CCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEc---------------------
Confidence 5789999999999887653321 12357899999999999999999999999999863
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHH-HhcCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
..+|++++|+.++...++++|+++++.+++.+ .++.++|+++ +...++++++++|+| +|++|++++++++
T Consensus 89 -------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~ 161 (325)
T TIGR02824 89 -------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAK 161 (325)
T ss_pred -------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHH
Confidence 12489999999999999999999999888766 4788899886 458899999999998 5999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .++++.+++++.+.++++|.+.+++. ...++...+.... .+.++|+++|++|+. .....+++++++|+++
T Consensus 162 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v 235 (325)
T TIGR02824 162 AFGA-RVFTTAGSDEKCAACEALGADIAINY--REEDFVEVVKAET--GGKGVDVILDIVGGS-YLNRNIKALALDGRIV 235 (325)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHcCCcEEEec--CchhHHHHHHHHc--CCCCeEEEEECCchH-HHHHHHHhhccCcEEE
Confidence 9999 67778788888888888998766553 2234444444433 245799999999975 7888999999999999
Q ss_pred EecccCC-cccccchHHHhcCcEEEEeeccC-----------CCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHH
Q 020928 238 LIGLAKT-EMTVALTPAAAREVDVIGIFRYR-----------STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 305 (319)
Q Consensus 238 ~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~ 305 (319)
.++.... ...+....+..+++.+.+..... +.+.+++++++++.+. +..++.+++ ++++++++.
T Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~--~~~~~~~~~ 311 (325)
T TIGR02824 236 QIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVR--PVIDKVFPL--EDAAQAHAL 311 (325)
T ss_pred EEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCccc--CccccEEeH--HHHHHHHHH
Confidence 9986432 12334444557888888765431 1245677888888874 345677788 999999999
Q ss_pred HhcCCCceEEEEeC
Q 020928 306 SAQGGNAIKVMFNL 319 (319)
Q Consensus 306 ~~~~~~~gkvvi~~ 319 (319)
+.++...+|+++++
T Consensus 312 ~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 312 MESGDHIGKIVLTV 325 (325)
T ss_pred HHhCCCcceEEEeC
Confidence 99888889999875
No 117
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=1e-28 Score=214.44 Aligned_cols=272 Identities=24% Similarity=0.326 Sum_probs=213.1
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|++...|.. ..+|.++|||++|+|+++|+++.+|++||+|++.
T Consensus 5 i~v~~~~~~~~d~~~~~g~~-----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~--------------------- 58 (293)
T cd05195 5 VEVKAAGLNFRDVLVALGLL-----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL--------------------- 58 (293)
T ss_pred EEEEEEecCHHHHHHHhCCC-----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE---------------------
Confidence 58899999999999887642 2458899999999999999999999999999864
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHHh-cCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
..|+|+||+.++.+.++++|+++++++++.+ .+..++|+++.. .+++++++++|+| +|++|++++|+|+
T Consensus 59 --------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~ 130 (293)
T cd05195 59 --------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQ 130 (293)
T ss_pred --------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHH
Confidence 2589999999999999999999999998877 477889988844 8899999999997 6999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcC--CCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK 235 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~ 235 (319)
..|+ +++++.+++++.+.+++++ ++.+++. ...++...+.++. .+.++|+++|++|+. .....+++++++|+
T Consensus 131 ~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~ 204 (293)
T cd05195 131 HLGA-EVFATVGSEEKREFLRELGGPVDHIFSS--RDLSFADGILRAT--GGRGVDVVLNSLSGE-LLRASWRCLAPFGR 204 (293)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHhCCCcceEeec--CchhHHHHHHHHh--CCCCceEEEeCCCch-HHHHHHHhcccCce
Confidence 9999 6888888888888888887 5666553 2334445554443 356799999999987 88999999999999
Q ss_pred EEEecccCCc--ccccchHHHhcCcEEEEeecc----------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHH
Q 020928 236 VCLIGLAKTE--MTVALTPAAAREVDVIGIFRY----------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 303 (319)
Q Consensus 236 ~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~ 303 (319)
++.++..... ..+.... ..+++.+...... .+.+.++++++.++.+. +.....+.+ +++.+++
T Consensus 205 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~a~ 279 (293)
T cd05195 205 FVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVPS--ASEIDAF 279 (293)
T ss_pred EEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeech--hhHHHHH
Confidence 9999854321 1122222 2233444332211 23467788899999884 445566777 9999999
Q ss_pred HHHhcCCCceEEEE
Q 020928 304 EISAQGGNAIKVMF 317 (319)
Q Consensus 304 ~~~~~~~~~gkvvi 317 (319)
+.+.++...+|+++
T Consensus 280 ~~~~~~~~~~~ivv 293 (293)
T cd05195 280 RLMQSGKHIGKVVL 293 (293)
T ss_pred HHHhcCCCCceecC
Confidence 99998888888874
No 118
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.97 E-value=3.6e-28 Score=214.87 Aligned_cols=279 Identities=21% Similarity=0.266 Sum_probs=210.5
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+.+..|... ....+|.++|||++|+|+. ++++++++||+|++....
T Consensus 32 v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~------------------ 89 (324)
T cd08288 32 VEVHYSTLNYKDGLAITGKGG--IVRTFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWG------------------ 89 (324)
T ss_pred EEEEEEecCHHHHHHhcCCcc--ccCCCCCccccceEEEEEe--CCCCCCCCCCEEEECCcc------------------
Confidence 578999999999988766421 1124578899999999999 777889999999974200
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHH---hcCCC-CCCeEEEECC-CHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR---RANVG-PETNVMIMGS-GPIGLVTLL 154 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~---~~~~~-~~~~vlI~G~-g~vG~~ai~ 154 (319)
. .....|+|++|+.++.+.++++|+++++++++.++ .+.+++.+++ ..+.. ++++++|+|+ |++|++++|
T Consensus 90 ---~-~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~ 165 (324)
T cd08288 90 ---V-GERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVA 165 (324)
T ss_pred ---C-CCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHH
Confidence 0 01136899999999999999999999999998775 5666766653 44555 6789999985 999999999
Q ss_pred HHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCC
Q 020928 155 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG 234 (319)
Q Consensus 155 la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G 234 (319)
+|+.+|+ .++++++++++.++++++|++.++++.. ....+..+ ...++|.+||++++. .....+..++.+|
T Consensus 166 ~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~---~~~~~~~~~d~~~~~-~~~~~~~~~~~~g 236 (324)
T cd08288 166 LLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE----LSEPGRPL---QKERWAGAVDTVGGH-TLANVLAQTRYGG 236 (324)
T ss_pred HHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhhhhh---ccCcccEEEECCcHH-HHHHHHHHhcCCC
Confidence 9999999 5777778889999999999988877532 12233322 234689999999974 6678888899999
Q ss_pred EEEEecccCC-cccccchHHHhcCcEEEEeecc-------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHH
Q 020928 235 KVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 306 (319)
Q Consensus 235 ~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~ 306 (319)
+++.+|.... ........+..+++.+.+.... .+.+..+.+++.++.+. +. .+.+++ +++++|++.+
T Consensus 237 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i-~~~~~~--~~~~~a~~~~ 311 (324)
T cd08288 237 AVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLE--AL-TREIPL--ADVPDAAEAI 311 (324)
T ss_pred EEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCcc--cc-ceeecH--HHHHHHHHHH
Confidence 9999986421 1223334444678888876432 12355677777788773 32 577888 9999999999
Q ss_pred hcCCCceEEEEeC
Q 020928 307 AQGGNAIKVMFNL 319 (319)
Q Consensus 307 ~~~~~~gkvvi~~ 319 (319)
++++..+|+++++
T Consensus 312 ~~~~~~~~vvv~~ 324 (324)
T cd08288 312 LAGQVRGRVVVDV 324 (324)
T ss_pred hcCCccCeEEEeC
Confidence 9999999999874
No 119
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.7e-27 Score=210.43 Aligned_cols=283 Identities=27% Similarity=0.378 Sum_probs=218.0
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|+.|+....+..... ..+|.++|||++|+|+.+|+++.+|++||+|++.+..
T Consensus 32 i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~------------------ 91 (328)
T cd08268 32 IRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAA------------------ 91 (328)
T ss_pred EEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEecccc------------------
Confidence 57899999999998887643221 3458899999999999999999999999999875210
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHH-hcCCCCCCeEEEEC-CCHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~ 157 (319)
.....|++++|+.++.+.++++|+++++++++.+ .++.++|+++. ...+.++++++|+| +|++|++++++++
T Consensus 92 -----~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~ 166 (328)
T cd08268 92 -----DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIAN 166 (328)
T ss_pred -----ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHH
Confidence 1123689999999999999999999999888776 47889999985 48889999999998 5999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .++.+++++++.+.++++|.+.+++.. ..++...+.... .+.++|++++++++. .....+++++++|+++
T Consensus 167 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v 240 (328)
T cd08268 167 AAGA-TVIATTRTSEKRDALLALGAAHVIVTD--EEDLVAEVLRIT--GGKGVDVVFDPVGGP-QFAKLADALAPGGTLV 240 (328)
T ss_pred HcCC-EEEEEcCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHHh--CCCCceEEEECCchH-hHHHHHHhhccCCEEE
Confidence 9998 677778888888888889987776543 234444444333 245799999999985 7888999999999999
Q ss_pred EecccCCc-ccccchHHHhcCcEEEEeecc---------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHh
Q 020928 238 LIGLAKTE-MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA 307 (319)
Q Consensus 238 ~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~ 307 (319)
.+|..... ..+.....+.+++.+.+.... ...+..+.+++.++.+. +.....|++ +++.++++.+.
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~ 316 (328)
T cd08268 241 VYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALK--PVVDRVFPF--DDIVEAHRYLE 316 (328)
T ss_pred EEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCc--CCcccEEcH--HHHHHHHHHHH
Confidence 99854321 223333345677777665432 12345556667777774 335566778 99999999999
Q ss_pred cCCCceEEEEe
Q 020928 308 QGGNAIKVMFN 318 (319)
Q Consensus 308 ~~~~~gkvvi~ 318 (319)
++...+|++++
T Consensus 317 ~~~~~~~vv~~ 327 (328)
T cd08268 317 SGQQIGKIVVT 327 (328)
T ss_pred cCCCCceEEEe
Confidence 88888899986
No 120
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.97 E-value=5.9e-28 Score=212.82 Aligned_cols=278 Identities=29% Similarity=0.482 Sum_probs=220.0
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++++|++|+....+.... ....|.++|||++|+|+.+|+++.++++||+|++..
T Consensus 32 i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~-------------------- 89 (323)
T cd08241 32 IRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALT-------------------- 89 (323)
T ss_pred EEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec--------------------
Confidence 5788999999999887664311 123477899999999999999999999999999741
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~~~~vlI~G~-g~vG~~ai~la~ 157 (319)
..|++++|+.++.+.++++|++++..+++.+ .++.+|++++. ..+++++++++|+|+ |++|++++++|+
T Consensus 90 --------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~ 161 (323)
T cd08241 90 --------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAK 161 (323)
T ss_pred --------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 2589999999999999999999998888766 57888998885 588999999999985 999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .+++++.++++.+.++++|++..+.. ...++...+..+. .+.++|.++|++|+. ....++++++++|+++
T Consensus 162 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~--~~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v 235 (323)
T cd08241 162 ALGA-RVIAAASSEEKLALARALGADHVIDY--RDPDLRERVKALT--GGRGVDVVYDPVGGD-VFEASLRSLAWGGRLL 235 (323)
T ss_pred HhCC-EEEEEeCCHHHHHHHHHcCCceeeec--CCccHHHHHHHHc--CCCCcEEEEECccHH-HHHHHHHhhccCCEEE
Confidence 9999 58888888888999999998776653 2335555555443 345799999999974 7888999999999999
Q ss_pred EecccCCccc-ccchHHHhcCcEEEEeecc----------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHH
Q 020928 238 LIGLAKTEMT-VALTPAAAREVDVIGIFRY----------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 306 (319)
Q Consensus 238 ~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~ 306 (319)
.++....... +.......+++.+.+.... .+.+.++++++.++.+. +.....|++ ++++++++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~ 311 (323)
T cd08241 236 VIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR--PHVSAVFPL--EQAAEALRAL 311 (323)
T ss_pred EEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc--cccceEEcH--HHHHHHHHHH
Confidence 9986433222 2233345677777776532 13467788999999874 445677888 9999999999
Q ss_pred hcCCCceEEEEe
Q 020928 307 AQGGNAIKVMFN 318 (319)
Q Consensus 307 ~~~~~~gkvvi~ 318 (319)
.++...+|++++
T Consensus 312 ~~~~~~~~vvv~ 323 (323)
T cd08241 312 ADRKATGKVVLT 323 (323)
T ss_pred HhCCCCCcEEeC
Confidence 988888898864
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=3.9e-28 Score=213.92 Aligned_cols=279 Identities=27% Similarity=0.333 Sum_probs=205.9
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
||+.++++|++|+....|..........|.++|||++|+|+++|+++.+|++||+|++...
T Consensus 31 v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~------------------- 91 (319)
T cd08267 31 VKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLP------------------- 91 (319)
T ss_pred EEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEecc-------------------
Confidence 5788999999999988764311112345778999999999999999999999999987421
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~-g~vG~~ai~la~ 157 (319)
.+..|+|++|+.++.+.++++|+++++++++.+. .+.+||++++. .+++++++++|+|+ |++|++++++|+
T Consensus 92 ------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~ 165 (319)
T cd08267 92 ------PKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAK 165 (319)
T ss_pred ------CCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHH
Confidence 0236899999999999999999999998888774 78889999866 56999999999985 999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKV 236 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~~l~~~G~~ 236 (319)
..|+ .+++++++ ++.+.++++|.+.+++... .++. . ....+.++|+++||+|+. ......+..++++|++
T Consensus 166 ~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~--~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~ 236 (319)
T cd08267 166 ALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---A--LTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRY 236 (319)
T ss_pred HcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---h--hccCCCCCcEEEECCCchHHHHHHhhhccCCCCEE
Confidence 9999 57776654 7788889999877765432 2222 1 122356799999999953 2233334449999999
Q ss_pred EEecccCCcccccc-----h-HHHhcCcEEEEeeccCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCC
Q 020928 237 CLIGLAKTEMTVAL-----T-PAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 310 (319)
Q Consensus 237 v~~g~~~~~~~~~~-----~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 310 (319)
+.+|.......... . ....+.+.........+.+.++++++.++.+. +...++|++ ++++++++.+.+..
T Consensus 237 i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~--~~i~~a~~~~~~~~ 312 (319)
T cd08267 237 VSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLK--PVIDSVYPL--EDAPEAYRRLKSGR 312 (319)
T ss_pred EEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCee--eeeeeEEcH--HHHHHHHHHHhcCC
Confidence 99986432211111 1 11122222222111245688899999999874 446677888 99999999999888
Q ss_pred CceEEEE
Q 020928 311 NAIKVMF 317 (319)
Q Consensus 311 ~~gkvvi 317 (319)
..+|+++
T Consensus 313 ~~~~vvv 319 (319)
T cd08267 313 ARGKVVI 319 (319)
T ss_pred CCCcEeC
Confidence 8888874
No 122
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=5.4e-28 Score=213.62 Aligned_cols=280 Identities=23% Similarity=0.290 Sum_probs=212.1
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+..+.+... ....|.++|||++|+|+.+|+++.++++||+|++...
T Consensus 32 v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~------------------- 89 (325)
T cd08271 32 VKVHAAGLNPVDWKVIAWGPP---AWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHAS------------------- 89 (325)
T ss_pred EEEEEEecCHHHHHHhcCCCC---CCCCCcccccceEEEEEEeCCCCCcCCCCCEEEeccC-------------------
Confidence 578999999999988765431 1134789999999999999999999999999997421
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhcc-chhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~~~~vlI~G~-g~vG~~ai~la~ 157 (319)
....|+|++|+.++...++++|+++++.+++.+ ..+.++++++.. ++++++++++|+|+ |++|++++++|+
T Consensus 90 ------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~ 163 (325)
T cd08271 90 ------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAK 163 (325)
T ss_pred ------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHH
Confidence 113689999999999999999999999988876 478889999855 88999999999995 899999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .++++. ++++.+.++++|++.+++. ...++...+..+. .+.++|.+++++++. .....+++++++|+++
T Consensus 164 ~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v 236 (325)
T cd08271 164 RAGL-RVITTC-SKRNFEYVKSLGADHVIDY--NDEDVCERIKEIT--GGRGVDAVLDTVGGE-TAAALAPTLAFNGHLV 236 (325)
T ss_pred HcCC-EEEEEE-cHHHHHHHHHcCCcEEecC--CCccHHHHHHHHc--CCCCCcEEEECCCcH-hHHHHHHhhccCCEEE
Confidence 9999 455555 6677788888998777653 3334444454443 356799999999986 5667899999999999
Q ss_pred EecccCCcc--cccchHHHhcCcEEEEeecc---------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHH
Q 020928 238 LIGLAKTEM--TVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 306 (319)
Q Consensus 238 ~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~ 306 (319)
.++...... ........++.+++...... .+.+.++++++.++.+. +...+.+++ +++.++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~--~~~~~a~~~~ 312 (325)
T cd08271 237 CIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLE--PLVIEVLPF--EQLPEALRAL 312 (325)
T ss_pred EEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCee--eccceEEcH--HHHHHHHHHH
Confidence 887432211 11112233344444333221 12356788889999884 334566788 9999999999
Q ss_pred hcCCCceEEEEeC
Q 020928 307 AQGGNAIKVMFNL 319 (319)
Q Consensus 307 ~~~~~~gkvvi~~ 319 (319)
.++...+|+++++
T Consensus 313 ~~~~~~~kiv~~~ 325 (325)
T cd08271 313 KDRHTRGKIVVTI 325 (325)
T ss_pred HcCCccceEEEEC
Confidence 9888889999874
No 123
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=2.7e-27 Score=210.17 Aligned_cols=277 Identities=23% Similarity=0.344 Sum_probs=213.6
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|+|++|+....+.... ....|.++|||++|+|+.+|+++.+|++||+|++..
T Consensus 31 i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~-------------------- 88 (337)
T cd08275 31 VRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT-------------------- 88 (337)
T ss_pred EEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEec--------------------
Confidence 5789999999999987764311 124578999999999999999999999999999741
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHH-hcCCCCCCeEEEECC-CHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~~~~vlI~G~-g~vG~~ai~la~ 157 (319)
..|+|++|+.++.+.++++|+++++++++.++ ++.++|+++. ..+++++++|+|+|+ |.+|++++++|+
T Consensus 89 --------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~ 160 (337)
T cd08275 89 --------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCK 160 (337)
T ss_pred --------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHH
Confidence 25899999999999999999999998888775 7888999974 588999999999985 999999999999
Q ss_pred HcCCCeEEEec-CChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEE
Q 020928 158 AFGAPRIIITD-VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV 236 (319)
Q Consensus 158 ~~g~~~vv~v~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~ 236 (319)
.. . .+.+++ ..+++.++++++|++.+++. ...++...+.... +.++|+++|++|+. .....+++++++|++
T Consensus 161 ~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~---~~~~d~v~~~~g~~-~~~~~~~~l~~~g~~ 232 (337)
T cd08275 161 TV-P-NVTVVGTASASKHEALKENGVTHVIDY--RTQDYVEEVKKIS---PEGVDIVLDALGGE-DTRKSYDLLKPMGRL 232 (337)
T ss_pred Hc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeC--CCCcHHHHHHHHh---CCCceEEEECCcHH-HHHHHHHhhccCcEE
Confidence 98 2 223332 34557788888998776653 3345555555443 45799999999986 778899999999999
Q ss_pred EEecccCCc--ccc---------------cchHHHhcCcEEEEeecc---------CCCHHHHHHHHHcCCCCCCCceee
Q 020928 237 CLIGLAKTE--MTV---------------ALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKIDVKPLITH 290 (319)
Q Consensus 237 v~~g~~~~~--~~~---------------~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~ 290 (319)
+.+|..... ... .......+++.+.++... ...+.++++++.++.+. +....
T Consensus 233 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 310 (337)
T cd08275 233 VVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIK--PKIDS 310 (337)
T ss_pred EEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCC--Cceee
Confidence 999854321 111 112345667777665431 12356788888899874 44567
Q ss_pred eecCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 291 RFGFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 291 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
.|++ ++++++++.+.++...+|+++++
T Consensus 311 ~~~~--~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 311 VFPF--EEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred EEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence 7888 99999999999988889999864
No 124
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.96 E-value=9.4e-28 Score=210.35 Aligned_cols=273 Identities=26% Similarity=0.360 Sum_probs=209.6
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++++|++|+....+........+.|.++|||++|+|+.+|++++++++||+|++.+.
T Consensus 32 v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~------------------- 92 (309)
T cd05289 32 VKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTP------------------- 92 (309)
T ss_pred EEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccC-------------------
Confidence 5789999999999988764321112345889999999999999999999999999997421
Q ss_pred cccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHHHh-cCCCCCCeEEEECC-CHHHHHHHHHHH
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAAR 157 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlI~G~-g~vG~~ai~la~ 157 (319)
....|+|++|+.++...++++|+++++++++.++ .+.++++++.. ..++++++++|+|+ |.+|++++++++
T Consensus 93 ------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~ 166 (309)
T cd05289 93 ------FTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAK 166 (309)
T ss_pred ------CCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHH
Confidence 0125899999999999999999999998888775 67788988866 56999999999985 999999999999
Q ss_pred HcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 158 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 158 ~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
..|+ .++++..++ +.++++++|.+.++.... .++.. ...+.++|.+||++++. .....+++++++|+++
T Consensus 167 ~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~------~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v 235 (309)
T cd05289 167 ARGA-RVIATASAA-NADFLRSLGADEVIDYTK--GDFER------AAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLV 235 (309)
T ss_pred HcCC-EEEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh------ccCCCCceEEEECCchH-HHHHHHHHHhcCcEEE
Confidence 9999 566666666 788888899877665332 22221 12356799999999987 8889999999999999
Q ss_pred EecccCCcccccchHHHhcCcEEEEeecc--CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEE
Q 020928 238 LIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 315 (319)
Q Consensus 238 ~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkv 315 (319)
.++....... ....++..+...... .+.+.+++++++++.+. +..++.|++ ++++++++.+.++...+|+
T Consensus 236 ~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kv 307 (309)
T cd05289 236 SIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLR--PVVDRVFPL--EDAAEAHERLESGHARGKV 307 (309)
T ss_pred EEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCEE--EeeccEEcH--HHHHHHHHHHHhCCCCCcE
Confidence 9986433211 222334444333221 35688899999999873 446677888 9999999999988777888
Q ss_pred EE
Q 020928 316 MF 317 (319)
Q Consensus 316 vi 317 (319)
++
T Consensus 308 v~ 309 (309)
T cd05289 308 VL 309 (309)
T ss_pred eC
Confidence 74
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=1.1e-27 Score=224.78 Aligned_cols=273 Identities=20% Similarity=0.277 Sum_probs=215.5
Q ss_pred cceEeeccCCccccccccccc-cc---cCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCC
Q 020928 3 KAVTAYCMQNVVYDQTMRCAN-FI---VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC 78 (319)
Q Consensus 3 v~~~~i~~~D~~~~~~~~~~~-~~---~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ 78 (319)
|-|+.||..|+-...|+.... .| .....++|.||+|+ .+-|.||+++.
T Consensus 1451 VYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRvM~mv------------------ 1502 (2376)
T KOG1202|consen 1451 VYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRVMGMV------------------ 1502 (2376)
T ss_pred EEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEEEEee------------------
Confidence 568899999998888766332 11 34567899999996 56799999864
Q ss_pred CCcccccCCCCCCcceeEEeecCCceEeCCCCCChhhhhccc-hhHHHHHHH-HhcCCCCCCeEEEE-CCCHHHHHHHHH
Q 020928 79 PEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIM-GSGPIGLVTLLA 155 (319)
Q Consensus 79 ~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlI~-G~g~vG~~ai~l 155 (319)
.--++++.+.++.+++|.+|.+++.++|++.| .+.|+||+| .++..++|+++||+ |+|++|++||.+
T Consensus 1503 ----------pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIai 1572 (2376)
T KOG1202|consen 1503 ----------PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAI 1572 (2376)
T ss_pred ----------ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHH
Confidence 24578889999999999999999999999998 688999998 67999999999999 689999999999
Q ss_pred HHHcCCCeEEEecCChhHHHHHHHcC--CCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCC
Q 020928 156 ARAFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG 233 (319)
Q Consensus 156 a~~~g~~~vv~v~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~ 233 (319)
|.+.|+ .|+.+..++++++++.+.. ..+...-++.+.+|..-+ ++.+.|+|+|+|++.... +-++..++||+.+
T Consensus 1573 ALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~v--l~~T~GrGVdlVLNSLae-EkLQASiRCLa~~ 1648 (2376)
T KOG1202|consen 1573 ALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHV--LWHTKGRGVDLVLNSLAE-EKLQASIRCLALH 1648 (2376)
T ss_pred HHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHH--HHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc
Confidence 999999 7999999999999988733 122111234455665444 345579999999999985 4899999999999
Q ss_pred CEEEEecccCCcccccc-hHHHhcCcEEEEeecc------CCCHHHHHHHHHcCCCC--CCCceeeeecCChhhHHHHHH
Q 020928 234 GKVCLIGLAKTEMTVAL-TPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKID--VKPLITHRFGFTQKEIEDAFE 304 (319)
Q Consensus 234 G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~a~~ 304 (319)
|||..+|-.+...+-+. .....++..+.|.+.. .+.+.++..++++|... ..|+.+.+|+- .++++||+
T Consensus 1649 GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~--~qvE~AFR 1726 (2376)
T KOG1202|consen 1649 GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHG--QQVEDAFR 1726 (2376)
T ss_pred CeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccH--HHHHHHHH
Confidence 99999985443333333 3355677888776643 44577888888887653 47777787777 99999999
Q ss_pred HHhcCCCceEEEEeC
Q 020928 305 ISAQGGNAIKVMFNL 319 (319)
Q Consensus 305 ~~~~~~~~gkvvi~~ 319 (319)
+|.++++.||+|+++
T Consensus 1727 fMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1727 FMASGKHIGKVVIKV 1741 (2376)
T ss_pred HHhccCccceEEEEE
Confidence 999999999999974
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=1.3e-24 Score=178.68 Aligned_cols=249 Identities=16% Similarity=0.202 Sum_probs=196.1
Q ss_pred CCcccc----cceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCCcccccCCCCCCcceeEEeecCC-
Q 020928 28 KPMVIG----HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK- 102 (319)
Q Consensus 28 ~p~i~G----~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~- 102 (319)
.|+.+| ..++|.|++. +.++|++||.|.+. -+|.||..+++.
T Consensus 67 ~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~-------------------------------~gWeeysii~~~~ 113 (343)
T KOG1196|consen 67 PPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGI-------------------------------VGWEEYSVITPND 113 (343)
T ss_pred CcccCCcEecCCceEEEEec--CCCCCCcCceEEEe-------------------------------ccceEEEEecCcc
Confidence 455555 3678999996 45789999999974 289999999875
Q ss_pred -ceEeCCC--CCChhhhh--ccchhHHHHHHHH-hcCCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHH
Q 020928 103 -LCYKLPD--NVSLEEGA--MCEPLSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS 175 (319)
Q Consensus 103 -~~~~iP~--~~~~~~aa--~~~~~~~a~~~l~-~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~ 175 (319)
..+++|. ++++-... +-++..|||-.+. ....++|++++|-| +|++|+.+.|+|+..|+ .||.+..++++.+
T Consensus 114 ~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ 192 (343)
T KOG1196|consen 114 LEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVD 192 (343)
T ss_pred hhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhh
Confidence 3455554 34444443 3368889998884 58899999999997 69999999999999999 8999999999999
Q ss_pred HHHH-cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEecccC---Ccccc---
Q 020928 176 IARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK---TEMTV--- 248 (319)
Q Consensus 176 ~~~~-~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~---~~~~~--- 248 (319)
+++. +|.+.+++|.. +.+..+.+++. ...++|+.||++|+. ..+..+..|+..||++.||+.. .+.+.
T Consensus 193 ll~~~~G~d~afNYK~-e~~~~~aL~r~---~P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~ 267 (343)
T KOG1196|consen 193 LLKTKFGFDDAFNYKE-ESDLSAALKRC---FPEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLH 267 (343)
T ss_pred hhHhccCCccceeccC-ccCHHHHHHHh---CCCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCcccc
Confidence 9887 79999999854 33666666664 367899999999997 8999999999999999999633 12222
Q ss_pred cchHHHhcCcEEEEeecc------CCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEEeC
Q 020928 249 ALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 319 (319)
Q Consensus 249 ~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 319 (319)
.....++|++++.++... .+.+..+..++++|+++....+. -++ +..++||.-|-+++..||.++++
T Consensus 268 ~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~--~Gl--en~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 268 NLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIA--DGL--ENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred chhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHH--HHH--hccHHHHHHHhccCcccceEEEe
Confidence 224467888999887543 55678899999999997655443 256 99999999999999999999874
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.87 E-value=1.1e-22 Score=150.39 Aligned_cols=104 Identities=32% Similarity=0.612 Sum_probs=91.6
Q ss_pred CCcceEeeccCCccccccccccccccCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCC
Q 020928 1 MPKAVTAYCMQNVVYDQTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 80 (319)
Q Consensus 1 v~v~~~~i~~~D~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 80 (319)
|||.++|||++|++++++. .....+.|.++|||++|+|+++|+++++|++||||++.+..+|+.|.+|..+.+.+|+.
T Consensus 6 Vkv~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~ 83 (109)
T PF08240_consen 6 VKVRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPN 83 (109)
T ss_dssp EEEEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTT
T ss_pred EEEEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCC
Confidence 6899999999999999984 23346889999999999999999999999999999998888999999999999999998
Q ss_pred cccccCCCCCCcceeEEeecCCceEeC
Q 020928 81 MRFFGSPPTNGSLAHKVVHPAKLCYKL 107 (319)
Q Consensus 81 ~~~~~~~~~~g~~~e~~~~~~~~~~~i 107 (319)
...++.. .+|+|+||+.++++.++|+
T Consensus 84 ~~~~g~~-~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 84 PEVLGLG-LDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp BEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred CCEeEcC-CCCcccCeEEEehHHEEEC
Confidence 8877664 7999999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.73 E-value=9.7e-17 Score=122.54 Aligned_cols=128 Identities=28% Similarity=0.569 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHH
Q 020928 147 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 226 (319)
Q Consensus 147 ~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~ 226 (319)
++|++++|+|+..|+ +|++++++++++++++++|++.+++++. .++.+.++++.. +.++|+||||+|++..++.+
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~--~~~~d~vid~~g~~~~~~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTG--GRGVDVVIDCVGSGDTLQEA 75 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTT--TSSEEEEEESSSSHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccc--cccceEEEEecCcHHHHHHH
Confidence 589999999999995 8999999999999999999999988643 457777777753 46899999999987899999
Q ss_pred HHhhcCCCEEEEecccC-CcccccchHHHhcCcEEEEeeccC-CCHHHHHHHHHc
Q 020928 227 LNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRYR-STWPLCIEFLRS 279 (319)
Q Consensus 227 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~ 279 (319)
+++++++|+++.+|... ...+++...++++++++.+++... ++++++++++++
T Consensus 76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 99999999999999877 667888889999999999999884 778888888753
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.46 E-value=1.9e-12 Score=118.65 Aligned_cols=155 Identities=16% Similarity=0.230 Sum_probs=114.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEe-eccCCCC-----------cchhHHHHH
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDI-----------EDVDTDVGK 201 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-~~~~~~~-----------~~~~~~i~~ 201 (319)
..++++|+|+|+|.+|+++++.|+.+|+ .|++++.++++++.++++|++.+ ++..... +++.+...+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 5689999999999999999999999999 79999999999999999999854 4321110 122222222
Q ss_pred hhhhcCCCccEEEEccCChH-----H-HHHHHHhhcCCCEEEEeccc-CCc--ccccchHHHh-cCcEEEEeeccCCCHH
Q 020928 202 IQNAMGSGIDVSFDCVGFDK-----T-MSTALNATRPGGKVCLIGLA-KTE--MTVALTPAAA-REVDVIGIFRYRSTWP 271 (319)
Q Consensus 202 ~~~~~~~~~d~v~d~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~i~~~~~~~~~~~ 271 (319)
+......++|++|+|++.+. . .+.+++.++++|+++.++.. +.. .+.+...+.. +++++.|.+..+..+.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p 320 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP 320 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence 21112257999999999742 4 48999999999999999874 332 3344445554 8999999887765555
Q ss_pred -HHHHHHHcCCCCCCCcee
Q 020928 272 -LCIEFLRSGKIDVKPLIT 289 (319)
Q Consensus 272 -~~~~~~~~g~~~~~~~~~ 289 (319)
++.+++.++.+++.+.++
T Consensus 321 ~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 321 TQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred HHHHHHHHhCCccHHHHhc
Confidence 599999999886555544
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.44 E-value=4.3e-12 Score=113.49 Aligned_cols=172 Identities=19% Similarity=0.296 Sum_probs=132.9
Q ss_pred HHHHHHh-cC-CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHh
Q 020928 125 GVHACRR-AN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 202 (319)
Q Consensus 125 a~~~l~~-~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~ 202 (319)
++.++.+ .+ .-+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.+.+.++++|++.+ +. .+. +
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~~-------~e~---v 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-TM-------EEA---V 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-cH-------HHH---H
Confidence 3555533 33 4689999999999999999999999999 68889999999999999997432 11 111 1
Q ss_pred hhhcCCCccEEEEccCChHHHHHH-HHhhcCCCEEEEecccCCcccccchHHHhcCcEEEEeeccCC--CHH--HHHHHH
Q 020928 203 QNAMGSGIDVSFDCVGFDKTMSTA-LNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS--TWP--LCIEFL 277 (319)
Q Consensus 203 ~~~~~~~~d~v~d~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~--~~~~~~ 277 (319)
.++|+||+|.|.+..+... ++.++++|+++.+|.. +..++...+..+++++.+...... .++ ..+.++
T Consensus 256 -----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LL 328 (413)
T cd00401 256 -----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILL 328 (413)
T ss_pred -----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhh
Confidence 2579999999988777764 9999999999999964 346777778888999998887632 345 689999
Q ss_pred HcCCC-CCCCceeee-----ecCChh-hHHHHHHHHhcCCC-ceEEEE
Q 020928 278 RSGKI-DVKPLITHR-----FGFTQK-EIEDAFEISAQGGN-AIKVMF 317 (319)
Q Consensus 278 ~~g~~-~~~~~~~~~-----~~~~~~-~~~~a~~~~~~~~~-~gkvvi 317 (319)
.+|.+ ++.+.+.+. ++| + ++.++++.+.+... ..|+++
T Consensus 329 a~Grlvnl~~~~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~ 374 (413)
T cd00401 329 AEGRLVNLGCATGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYF 374 (413)
T ss_pred hCcCCCCCcccCCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEE
Confidence 99999 777666665 556 8 99999998887643 346654
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.34 E-value=4.1e-13 Score=101.96 Aligned_cols=119 Identities=29% Similarity=0.389 Sum_probs=77.9
Q ss_pred cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC--ChHHHHHHHHhhcCCCEEEEecccCCcccccchHHHhcC
Q 020928 180 LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG--FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAARE 257 (319)
Q Consensus 180 ~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 257 (319)
||++++++|.. +++ ....++|+|||++| ++..+..++++| ++|+++.++. .............
T Consensus 1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~---~~~~~~~~~~~~~ 65 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG---DLPSFARRLKGRS 65 (127)
T ss_dssp CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S---HHHHHHHHHHCHH
T ss_pred CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC---cccchhhhhcccc
Confidence 68999999863 333 13678999999999 654446777788 9999998873 0000011011223
Q ss_pred cEEEEeec------cCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCCCceEEEE
Q 020928 258 VDVIGIFR------YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 317 (319)
Q Consensus 258 ~~i~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi 317 (319)
++...... ..+.++++.+++++|++ +|.+.++|++ +++.+|++.++++...||+|+
T Consensus 66 ~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 66 IRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred eEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence 33333331 13458999999999999 7778889999 999999999999999999996
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.64 E-value=3.9e-07 Score=83.80 Aligned_cols=105 Identities=17% Similarity=0.256 Sum_probs=79.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCC-------------CcchhHHHHH
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-------------IEDVDTDVGK 201 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~-------------~~~~~~~i~~ 201 (319)
.++++++|+|+|.+|++++++|+.+|+ .|++++.++++.+.++++|++.+.. +.. .+++.+...+
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v-~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLEL-DFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEec-cccccccccccceeecCHHHHHHHHH
Confidence 467999999999999999999999999 6889999999999999999876322 211 1233333333
Q ss_pred hhhhcCCCccEEEEcc---CChH---HHHHHHHhhcCCCEEEEecc
Q 020928 202 IQNAMGSGIDVSFDCV---GFDK---TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 202 ~~~~~~~~~d~v~d~~---g~~~---~~~~~~~~l~~~G~~v~~g~ 241 (319)
+..+...++|++|+|+ |.+. .....++.|++++.+++++.
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~ 285 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAA 285 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeee
Confidence 3332346799999999 6543 56778999999999999874
No 133
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.64 E-value=5.5e-07 Score=77.58 Aligned_cols=172 Identities=17% Similarity=0.257 Sum_probs=104.8
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHcCCC-eEEEecCChhHHHHHHHc----CCCEeeccCCCCcchhHHHHHhhhh
Q 020928 131 RANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 131 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~i~~~~~~ 205 (319)
.+.++++++||.+|+|. |..++++++..|.. .|++++.+++..+.+++. +...+.... .+ +..+..
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d----~~~l~~- 142 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GE----IEALPV- 142 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cc----hhhCCC-
Confidence 46789999999999988 98888888887764 699999999988888763 322221110 11 222211
Q ss_pred cCCCccEEEEcc------CChHHHHHHHHhhcCCCEEEEecccCCcccccchHHHhcCcEEEEe-eccCCCHHHHHHHHH
Q 020928 206 MGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI-FRYRSTWPLCIEFLR 278 (319)
Q Consensus 206 ~~~~~d~v~d~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~ 278 (319)
....+|+|+... .....+..+.+.|+++|+++..+..... ..+ ....+...+.+. ........++.++++
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~l~ 219 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-ELP--EEIRNDAELYAGCVAGALQEEEYLAMLA 219 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CCC--HHHHHhHHHHhccccCCCCHHHHHHHHH
Confidence 234799998543 2235788999999999999987643322 111 111111111111 112335667777777
Q ss_pred c-CCCCCCCceeeeecCChhhHHHHHHHH--hcCCCceEEE
Q 020928 279 S-GKIDVKPLITHRFGFTQKEIEDAFEIS--AQGGNAIKVM 316 (319)
Q Consensus 279 ~-g~~~~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~gkvv 316 (319)
+ |.........+.+.+ +++.++++.+ .++...++.+
T Consensus 220 ~aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 220 EAGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred HCCCCceEEEeccceec--ccHHHHHHHhccccccccCceE
Confidence 6 433333333444566 8888998888 5554444444
No 134
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.48 E-value=8.8e-06 Score=69.13 Aligned_cols=135 Identities=21% Similarity=0.324 Sum_probs=86.0
Q ss_pred cceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCCh
Q 020928 92 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 171 (319)
Q Consensus 92 ~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~ 171 (319)
+|.+|.. +...++.+++++++..+.. +........+.. .++++.+||-+|+|. |..++.+++ .|...|++++.++
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h-~tt~~~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~ 152 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTH-PTTRLCLEALEK-LVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDP 152 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCC-HHHHHHHHHHHh-hcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCH
Confidence 3445543 6677899999998887652 222223333332 257889999999988 888886655 6776799999999
Q ss_pred hHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEeccc
Q 020928 172 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLA 242 (319)
Q Consensus 172 ~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 242 (319)
...+.+++.-....+. . . + .+.. ....+|+|+.+.... ..++.+.+.|+++|+++..+..
T Consensus 153 ~~l~~A~~n~~~~~~~---~--~----~-~~~~-~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 153 QAVEAARENAELNGVE---L--N----V-YLPQ-GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHHHHHcCCC---c--e----E-EEcc-CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 9888776531110000 0 0 0 0100 111589998766543 2456788899999999987643
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.37 E-value=8.8e-06 Score=73.54 Aligned_cols=103 Identities=23% Similarity=0.265 Sum_probs=78.3
Q ss_pred HHHHHHhc-CCC-CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHh
Q 020928 125 GVHACRRA-NVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 202 (319)
Q Consensus 125 a~~~l~~~-~~~-~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~ 202 (319)
+|+++.++ ++. .|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+. +.+ +.++
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-----------l~ea 264 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-----------MEEA 264 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-----------HHHH
Confidence 45666553 554 89999999999999999999999999 788898888776666555643 211 1112
Q ss_pred hhhcCCCccEEEEccCChHHHH-HHHHhhcCCCEEEEecccCC
Q 020928 203 QNAMGSGIDVSFDCVGFDKTMS-TALNATRPGGKVCLIGLAKT 244 (319)
Q Consensus 203 ~~~~~~~~d~v~d~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~ 244 (319)
. .++|++|++.|....+. ..+..+++++.++..|....
T Consensus 265 l----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 265 A----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred H----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 1 26899999999876665 68889999999999986554
No 136
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.31 E-value=4.8e-05 Score=66.15 Aligned_cols=113 Identities=15% Similarity=0.219 Sum_probs=83.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.+.+++|+|.|.+|+.+++.++.+|+ .|.+.++++++.+.++++|...+ .+ ..+.+. -.++|+||+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~--------~~l~~~----l~~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL--------SELAEE----VGKIDIIFN 216 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH--------HHHHHH----hCCCCEEEE
Confidence 58999999999999999999999998 78889999888888888886532 11 112222 136999999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEEecccCCcccccchHHHhcCcEEEEee
Q 020928 216 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 264 (319)
Q Consensus 216 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~ 264 (319)
|++..-.....++.+++++.++.++..+....+ .....++++..+..
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~~~ 263 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALLAP 263 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEEEC
Confidence 988653446677889999999999876554444 23344566666543
No 137
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.28 E-value=6.2e-06 Score=72.30 Aligned_cols=108 Identities=20% Similarity=0.299 Sum_probs=81.3
Q ss_pred CceEeCCCCCChhhhhccchhHHHHHHHHhcCC----CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhH-HHH
Q 020928 102 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANV----GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR-LSI 176 (319)
Q Consensus 102 ~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~----~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~ 176 (319)
...+++|+.+..+.++...+.++++.+++.+.. -++.+|+|+|+|.+|..+++.++..|...|+++++++++ .++
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 356778889999988888888888888765332 478999999999999999999998887788889998876 467
Q ss_pred HHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHH
Q 020928 177 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 222 (319)
Q Consensus 177 ~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~ 222 (319)
++++|.. +..+ +.+.+.. ...|+||.|++.+..
T Consensus 219 a~~~g~~-~~~~--------~~~~~~l----~~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL--------DELLELL----NEADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH--------HHHHHHH----hcCCEEEECCCCCch
Confidence 7888863 2221 1121111 358999999998754
No 138
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.21 E-value=1.8e-05 Score=63.93 Aligned_cols=105 Identities=16% Similarity=0.223 Sum_probs=77.9
Q ss_pred HHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChh----HHHHHHHcCCCEeeccCCCCcchhHHHHH
Q 020928 126 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ----RLSIARNLGADETAKVSTDIEDVDTDVGK 201 (319)
Q Consensus 126 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~~i~~ 201 (319)
...++...++++++||-+|+|+ |..+.-+|+..+ +|+++++.++ ....++.+|...+.....+ . ..-
T Consensus 62 A~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD-G--~~G--- 132 (209)
T COG2518 62 ARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGD-G--SKG--- 132 (209)
T ss_pred HHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC-c--ccC---
Confidence 4456778999999999999988 999999999988 7999999887 4445666887554432211 1 000
Q ss_pred hhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEecc
Q 020928 202 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 202 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~ 241 (319)
+ .....||.|+-+.+.+..-+.+++.|+++|+++..-.
T Consensus 133 ~--~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 133 W--PEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred C--CCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 1 1136799999888887777889999999999986643
No 139
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.20 E-value=1.3e-07 Score=86.09 Aligned_cols=159 Identities=19% Similarity=0.258 Sum_probs=104.0
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCCcccccCCCCCCcceeEEeecCCceEe---C
Q 020928 31 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK---L 107 (319)
Q Consensus 31 i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~---i 107 (319)
.-|.|+++.+.++++++.+ +|++.+.. |++|.+| |..|......|. ..++.|++++.++. .+.. |
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~~t~i 156 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGK-VLERLFQKAFSVGK-RVRTETDI 156 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchH-HHHHHHHHHHHHhh-hhhhhcCC
Confidence 4788999999999998876 56666666 8888888 344433333221 34678999988876 3322 3
Q ss_pred -CCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHH-HHHHHcCCCEe
Q 020928 108 -PDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADET 185 (319)
Q Consensus 108 -P~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~~g~~~v 185 (319)
+..+|...+|. -.+.+.....++++++|+|+|.+|..+++.++..|+..|++++++.++. +++++++...
T Consensus 157 ~~~~vSv~~~Av-------~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~- 228 (417)
T TIGR01035 157 SAGAVSISSAAV-------ELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA- 228 (417)
T ss_pred CCCCcCHHHHHH-------HHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE-
Confidence 22333322210 0112333446789999999999999999999999976888998988774 4667777532
Q ss_pred eccCCCCcchhHHHHHhhhhcCCCccEEEEccCChH
Q 020928 186 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 221 (319)
Q Consensus 186 ~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~ 221 (319)
+.+ ..+.+.. .++|+||+|++.+.
T Consensus 229 i~~--------~~l~~~l----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 229 VKF--------EDLEEYL----AEADIVISSTGAPH 252 (417)
T ss_pred eeH--------HHHHHHH----hhCCEEEECCCCCC
Confidence 221 1111111 36899999998764
No 140
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.13 E-value=0.00024 Score=61.24 Aligned_cols=237 Identities=11% Similarity=0.108 Sum_probs=128.9
Q ss_pred EEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCCcccccCC--------------CCCCcceeEEeecCCc
Q 020928 38 GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------------PTNGSLAHKVVHPAKL 103 (319)
Q Consensus 38 G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~~e~~~~~~~~ 103 (319)
++|++ +++.++.+|.||.+.. +++.+...-... ...-.|-+|.++..+.
T Consensus 39 A~Vve--S~~~~i~vGerlyGy~---------------P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~ 101 (314)
T PF11017_consen 39 ATVVE--SRHPGIAVGERLYGYF---------------PMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADP 101 (314)
T ss_pred EEEEe--eCCCCccCccEEEeec---------------cccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCc
Confidence 45555 6788899999999752 222221111111 1123355565555443
Q ss_pred eEeCCCCCChhhh-hcc-chhHHHHHHHHh---cCCCCCCeEEEEC-CCHHHHHHHHHHH-HcCCCeEEEecCChhHHHH
Q 020928 104 CYKLPDNVSLEEG-AMC-EPLSVGVHACRR---ANVGPETNVMIMG-SGPIGLVTLLAAR-AFGAPRIIITDVDVQRLSI 176 (319)
Q Consensus 104 ~~~iP~~~~~~~a-a~~-~~~~~a~~~l~~---~~~~~~~~vlI~G-~g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~ 176 (319)
.+.- +.+.. +++ +.+.|.|..-+. .+.-..+.|+|.+ ++-.++.+...++ ..+..++|.++ |+.+..+
T Consensus 102 ~y~~----~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~F 176 (314)
T PF11017_consen 102 AYDP----EREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAF 176 (314)
T ss_pred ccCc----chhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhh
Confidence 3311 22222 233 445666644322 3344456677776 4777777777776 45555788884 5566679
Q ss_pred HHHcC-CCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCE-EEEecccCCccc-------
Q 020928 177 ARNLG-ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK-VCLIGLAKTEMT------- 247 (319)
Q Consensus 177 ~~~~g-~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~-~v~~g~~~~~~~------- 247 (319)
++++| .+.++.|+. +.++. ...--+++|..|+.+....+.+++...=+ .+.+|....+..
T Consensus 177 ve~lg~Yd~V~~Yd~--------i~~l~---~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~ 245 (314)
T PF11017_consen 177 VESLGCYDEVLTYDD--------IDSLD---APQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLP 245 (314)
T ss_pred hhccCCceEEeehhh--------hhhcc---CCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCC
Confidence 99999 567777743 33332 34567899999999888888888877643 455564322110
Q ss_pred ------ccchHHHhcCcEEEEeeccCCCHHHHHHHHHcCCCCCCCceeeeecCChhhHHHHHHHHhcCC
Q 020928 248 ------VALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 310 (319)
Q Consensus 248 ------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 310 (319)
++....+.+.++-.|...+.+.+.+.+..+.+.... .-.+.+.-+. +.++++++.+.+++
T Consensus 246 g~~~~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~-wl~~~~~~G~--ea~~~~y~~l~~G~ 311 (314)
T PF11017_consen 246 GPRPEFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQP-WLKVEEVAGP--EAVEAAYQDLLAGK 311 (314)
T ss_pred CCCcEEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcC-cEEEEEecCH--HHHHHHHHHHhcCC
Confidence 111112222222222222222233333333332221 2223455677 99999999988774
No 141
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.13 E-value=6.6e-05 Score=67.54 Aligned_cols=102 Identities=24% Similarity=0.267 Sum_probs=76.7
Q ss_pred HHHHHHh-cC-CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHh
Q 020928 125 GVHACRR-AN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 202 (319)
Q Consensus 125 a~~~l~~-~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~ 202 (319)
++.++.+ .+ .-.|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+.. .. ..+. +
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~v-~~-------leea---l 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFRV-MT-------MEEA---A 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCEe-CC-------HHHH---H
Confidence 3444433 34 4689999999999999999999999999 6888888887776666666522 11 1111 1
Q ss_pred hhhcCCCccEEEEccCChHHHHH-HHHhhcCCCEEEEecccC
Q 020928 203 QNAMGSGIDVSFDCVGFDKTMST-ALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 203 ~~~~~~~~d~v~d~~g~~~~~~~-~~~~l~~~G~~v~~g~~~ 243 (319)
.+.|++|++.|....+.. .+..+++++.++.+|...
T Consensus 249 -----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 249 -----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred -----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 257999999998876664 888999999999998654
No 142
>PLN02494 adenosylhomocysteinase
Probab=97.99 E-value=0.00013 Score=66.30 Aligned_cols=101 Identities=24% Similarity=0.277 Sum_probs=76.3
Q ss_pred HHHHHh-cCC-CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhh
Q 020928 126 VHACRR-ANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 203 (319)
Q Consensus 126 ~~~l~~-~~~-~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~ 203 (319)
+.++.+ .++ -.|++++|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+..+ . ..+ ..
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv-~-------leE----al 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL-T-------LED----VV 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec-c-------HHH----HH
Confidence 555533 333 679999999999999999999999999 68888888877666666665421 1 111 11
Q ss_pred hhcCCCccEEEEccCChHH-HHHHHHhhcCCCEEEEecccC
Q 020928 204 NAMGSGIDVSFDCVGFDKT-MSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 204 ~~~~~~~d~v~d~~g~~~~-~~~~~~~l~~~G~~v~~g~~~ 243 (319)
...|+++.+.|.... ....+..|++++.++.+|...
T Consensus 308 ----~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 308 ----SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred ----hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 247999999998754 478999999999999998754
No 143
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.85 E-value=6.2e-05 Score=68.93 Aligned_cols=160 Identities=19% Similarity=0.303 Sum_probs=98.9
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCEEEEccCccCCCCccccCCCCCCCCCcccccCCCCCCcceeEEeecCCceEeCCC
Q 020928 30 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD 109 (319)
Q Consensus 30 ~i~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~iP~ 109 (319)
.--|+|+++.+.++++++.+.-+|+.- . |++|.. -+..|......+ ...++.|++. +++|+
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~q-----I-lgQvk~----a~~~a~~~g~~g-~~l~~lf~~a--------~~~~k 150 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQ-----I-LGQVKD----AYALAQEAGTVG-TILNRLFQKA--------FSVAK 150 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChH-----H-HHHHHH----HHHHHHHcCCch-HHHHHHHHHH--------HHHHh
Confidence 346999999999999998774444432 2 333331 111111111110 0123444443 34455
Q ss_pred CCChhhhhccchhHHHHHHHHhcC----CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHH-HHHHcCCCE
Q 020928 110 NVSLEEGAMCEPLSVGVHACRRAN----VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE 184 (319)
Q Consensus 110 ~~~~~~aa~~~~~~~a~~~l~~~~----~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~~ 184 (319)
.+..+.+..-.+.++++.+++.+. -.++.+++|+|+|.+|.++++.++..|+..|++++++.++.+ +++++|..
T Consensus 151 ~v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~- 229 (423)
T PRK00045 151 RVRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE- 229 (423)
T ss_pred hHhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-
Confidence 555444444456777777775432 257899999999999999999999999878888889887754 67777753
Q ss_pred eeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChH
Q 020928 185 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 221 (319)
Q Consensus 185 v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~ 221 (319)
++.+ ..+.+. -.++|+||+|++.+.
T Consensus 230 ~~~~--------~~~~~~----l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 230 AIPL--------DELPEA----LAEADIVISSTGAPH 254 (423)
T ss_pred EeeH--------HHHHHH----hccCCEEEECCCCCC
Confidence 2221 111111 136899999999763
No 144
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.84 E-value=0.00019 Score=64.50 Aligned_cols=96 Identities=20% Similarity=0.351 Sum_probs=67.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 214 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~ 214 (319)
++.+++|+|+|.+|+.+++.++.+|+ .|+++++++++.+.+.. ++......+. + .+.+.+.. .++|++|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~----~-~~~l~~~l----~~aDvVI 235 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYS----N-AYEIEDAV----KRADLLI 235 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccC----C-HHHHHHHH----ccCCEEE
Confidence 34569999999999999999999999 68889998888776654 4543221111 1 11222221 3689999
Q ss_pred EccC---C--hH-HHHHHHHhhcCCCEEEEecc
Q 020928 215 DCVG---F--DK-TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 215 d~~g---~--~~-~~~~~~~~l~~~G~~v~~g~ 241 (319)
+|++ . +. .....++.+++++.++.++.
T Consensus 236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~ 268 (370)
T TIGR00518 236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAI 268 (370)
T ss_pred EccccCCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence 9983 2 11 23677788999999999874
No 145
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.82 E-value=0.00083 Score=58.13 Aligned_cols=111 Identities=15% Similarity=0.181 Sum_probs=77.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.+++++|+|.|.+|.+++..++.+|+ +|.+.++++++.+.+.+++...+ .+ ..+.+. -.+.|+||+
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~--------~~l~~~----l~~aDiVin 215 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL--------NKLEEK----VAEIDIVIN 215 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH--------HHHHHH----hccCCEEEE
Confidence 47899999999999999999999998 78888888887777666664321 11 112222 136899999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEEecccCCcccccchHHHhcCcEEEE
Q 020928 216 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 262 (319)
Q Consensus 216 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 262 (319)
+++..-.....++.++++..++.++..+...++ ...-.++++...
T Consensus 216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf--~~Ak~~G~~a~~ 260 (287)
T TIGR02853 216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF--EYAKKRGIKALL 260 (287)
T ss_pred CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH--HHHHHCCCEEEE
Confidence 987542234567788888888888876655554 444455555553
No 146
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.82 E-value=1.7e-05 Score=75.46 Aligned_cols=80 Identities=21% Similarity=0.374 Sum_probs=56.6
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC---------------------hhHHHHHHHcCCCEeeccCCC
Q 020928 133 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD---------------------VQRLSIARNLGADETAKVSTD 191 (319)
Q Consensus 133 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~---------------------~~~~~~~~~~g~~~v~~~~~~ 191 (319)
..++|++|+|+|+|++|+++++.++..|+ .|++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~- 210 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV- 210 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence 36789999999999999999999999999 57777642 34667788899766543211
Q ss_pred CcchhHHHHHhhhhcCCCccEEEEccCCh
Q 020928 192 IEDVDTDVGKIQNAMGSGIDVSFDCVGFD 220 (319)
Q Consensus 192 ~~~~~~~i~~~~~~~~~~~d~v~d~~g~~ 220 (319)
..+.. ...+ ..++|+||+++|..
T Consensus 211 ~~~~~--~~~~----~~~~D~Vi~AtG~~ 233 (564)
T PRK12771 211 GEDIT--LEQL----EGEFDAVFVAIGAQ 233 (564)
T ss_pred CCcCC--HHHH----HhhCCEEEEeeCCC
Confidence 01211 1111 23699999999976
No 147
>PRK08324 short chain dehydrogenase; Validated
Probab=97.80 E-value=0.00023 Score=69.45 Aligned_cols=140 Identities=19% Similarity=0.267 Sum_probs=84.1
Q ss_pred CcceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecC
Q 020928 91 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV 169 (319)
Q Consensus 91 g~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~ 169 (319)
-++++|..+++..++.+ +.++.++|..... -.....+++++||+| +|.+|..+++.+...|+ .|+.+++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~--------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r 454 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM--------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL 454 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC--------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence 34566777776666666 5566666641100 011223678999998 69999999999989998 6888888
Q ss_pred ChhHHHHHHH-cCC---CEeeccC-CCCcchhHHHHHhhhhcCCCccEEEEccCCh------------------------
Q 020928 170 DVQRLSIARN-LGA---DETAKVS-TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD------------------------ 220 (319)
Q Consensus 170 ~~~~~~~~~~-~g~---~~v~~~~-~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~------------------------ 220 (319)
+.++.+.+.+ ++. ...+..+ .+..+....+.++.+. .+++|++|++.|..
T Consensus 455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~-~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~ 533 (681)
T PRK08324 455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA-FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH 533 (681)
T ss_pred CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 8876654433 442 1111112 1222223333333332 34799999999831
Q ss_pred -HHHHHHHHhhcC---CCEEEEecc
Q 020928 221 -KTMSTALNATRP---GGKVCLIGL 241 (319)
Q Consensus 221 -~~~~~~~~~l~~---~G~~v~~g~ 241 (319)
...+.+.+.++. +|+++.+++
T Consensus 534 ~~l~~~~~~~l~~~~~~g~iV~vsS 558 (681)
T PRK08324 534 FLVAREAVRIMKAQGLGGSIVFIAS 558 (681)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECC
Confidence 123444566655 588998875
No 148
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.72 E-value=0.00072 Score=53.55 Aligned_cols=102 Identities=22% Similarity=0.312 Sum_probs=69.7
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH----HcCCCEeeccCCCCcchhHHHHHhhh
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~i~~~~~ 204 (319)
+...++++++.++=+|+|. |...+++|+..-..+++++++++++.+..+ +||.+.+..... +..+.+..+
T Consensus 27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~~-- 100 (187)
T COG2242 27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPDL-- 100 (187)
T ss_pred HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcCC--
Confidence 3557889999777788766 677788885544448999999988776654 578665544333 222333221
Q ss_pred hcCCCccEEEEccCC--hHHHHHHHHhhcCCCEEEEe
Q 020928 205 AMGSGIDVSFDCVGF--DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 205 ~~~~~~d~v~d~~g~--~~~~~~~~~~l~~~G~~v~~ 239 (319)
..+|.+|--=|. ++.++.++..|+++|+++.-
T Consensus 101 ---~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n 134 (187)
T COG2242 101 ---PSPDAIFIGGGGNIEEILEAAWERLKPGGRLVAN 134 (187)
T ss_pred ---CCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence 268999843332 35788999999999999854
No 149
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.69 E-value=0.00091 Score=54.66 Aligned_cols=102 Identities=17% Similarity=0.310 Sum_probs=70.4
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHH----HcC-CCEeeccCCCCcchhHHHHHh
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLG-ADETAKVSTDIEDVDTDVGKI 202 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~~g-~~~v~~~~~~~~~~~~~i~~~ 202 (319)
+.+.++.++++++.+|+|. |..++++|+..+. .+|++++.+++..+.++ .++ .+.+.... .+..+.+..
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~- 107 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT- 107 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh-
Confidence 4567899999999999988 8899999887642 37999999998877654 355 23322211 122222221
Q ss_pred hhhcCCCccEEEEccCC---hHHHHHHHHhhcCCCEEEE
Q 020928 203 QNAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 203 ~~~~~~~~d~v~d~~g~---~~~~~~~~~~l~~~G~~v~ 238 (319)
....+|.||...+. ...+..+.+.|+++|+++.
T Consensus 108 ---~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 108 ---INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred ---cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 23579999985543 3467788889999999885
No 150
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.68 E-value=0.0008 Score=58.42 Aligned_cols=96 Identities=20% Similarity=0.314 Sum_probs=64.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc----CCCE-eeccCCCCcchhHHHHHhhhhcCC
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADE-TAKVSTDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~-v~~~~~~~~~~~~~i~~~~~~~~~ 208 (319)
.+++++||-+|+|+ |..++.+++ .|..+|++++.++...+.+++. +... +..... + . ......
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~----~---~~~~~~ 224 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---Y----L---EQPIEG 224 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---c----c---ccccCC
Confidence 45789999999988 888877776 5777899999999887777652 2111 111100 0 0 111235
Q ss_pred CccEEEEccCCh---HHHHHHHHhhcCCCEEEEecc
Q 020928 209 GIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 209 ~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g~ 241 (319)
++|+|+...... ..+..+.+.|+++|+++..|.
T Consensus 225 ~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi 260 (288)
T TIGR00406 225 KADVIVANILAEVIKELYPQFSRLVKPGGWLILSGI 260 (288)
T ss_pred CceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 799998765543 356677889999999988764
No 151
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.62 E-value=0.0016 Score=53.82 Aligned_cols=81 Identities=25% Similarity=0.370 Sum_probs=57.1
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-HcCC--CE--eeccCCCCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGA--DE--TAKVSTDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~~g~--~~--v~~~~~~~~~~~~~i~~~~~~~~~~ 209 (319)
+++.++|.| ++++|.+..+.+...|+ +++.+.++.++++.+. +++. .. .+|+ .+..+....+..+.+.. +.
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~~~-g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPEEF-GR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHHhh-Cc
Confidence 346788999 59999999999999999 7888888888877554 4773 12 2332 23334445555555433 47
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|+++++.|-
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999999986
No 152
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.60 E-value=0.0011 Score=56.88 Aligned_cols=130 Identities=20% Similarity=0.328 Sum_probs=79.5
Q ss_pred CCceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-
Q 020928 101 AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN- 179 (319)
Q Consensus 101 ~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~- 179 (319)
....+++.+++.|-... -++...+..++++ .++++.++|=+|+|+ |.++|..++ +|+.+++++|..+...+.+++
T Consensus 129 ~~~~i~lDPGlAFGTG~-HpTT~lcL~~Le~-~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~eN 204 (300)
T COG2264 129 DELNIELDPGLAFGTGT-HPTTSLCLEALEK-LLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAAREN 204 (300)
T ss_pred CceEEEEccccccCCCC-ChhHHHHHHHHHH-hhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHHHH
Confidence 35667777777554221 1222223333433 356999999999988 888887666 588799999998877666554
Q ss_pred ---cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEeccc
Q 020928 180 ---LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLA 242 (319)
Q Consensus 180 ---~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 242 (319)
-+.... . . ...+ .. .....+..+|+|+-++=.. .+...+.++++++|++++.|.-
T Consensus 205 a~~N~v~~~-~--~-~~~~-~~---~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl 265 (300)
T COG2264 205 ARLNGVELL-V--Q-AKGF-LL---LEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGIL 265 (300)
T ss_pred HHHcCCchh-h--h-cccc-cc---hhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeeh
Confidence 222210 0 0 0000 00 0111235899999776543 3466777899999999998843
No 153
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.55 E-value=0.0028 Score=53.96 Aligned_cols=102 Identities=20% Similarity=0.369 Sum_probs=71.0
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCC-EeeccCCCCcchhHHHHHhh
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ 203 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~i~~~~ 203 (319)
++..++++|.+||=+|+|- |-+++.+|+..|+ +|++++-|++..+.+++ .|.. .+-..-. | .+.+.
T Consensus 65 ~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~---d----~rd~~ 135 (283)
T COG2230 65 LEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ---D----YRDFE 135 (283)
T ss_pred HHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec---c----ccccc
Confidence 3669999999999999988 8889999999999 79999999988776655 4543 1111111 1 11121
Q ss_pred hhcCCCccEE-----EEccCC---hHHHHHHHHhhcCCCEEEEecccC
Q 020928 204 NAMGSGIDVS-----FDCVGF---DKTMSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 204 ~~~~~~~d~v-----~d~~g~---~~~~~~~~~~l~~~G~~v~~g~~~ 243 (319)
..||.| |+-+|. ++.+..+.+.|+++|++.+.....
T Consensus 136 ----e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 136 ----EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred ----cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 237766 344454 246778888999999998766433
No 154
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.52 E-value=0.00079 Score=61.50 Aligned_cols=93 Identities=20% Similarity=0.275 Sum_probs=70.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
.-.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+..+ + +.++. ...|+|
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~--------~----leell----~~ADIV 313 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV--------T----LEDVV----ETADIF 313 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec--------c----HHHHH----hcCCEE
Confidence 4578999999999999999999999999 68888777766544444554321 1 11221 358999
Q ss_pred EEccCChHHHH-HHHHhhcCCCEEEEecccC
Q 020928 214 FDCVGFDKTMS-TALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 214 ~d~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 243 (319)
+.+.|....+. ..+..|++++.++.+|...
T Consensus 314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 314 VTATGNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred EECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence 99999876654 7899999999999998653
No 155
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.49 E-value=0.0018 Score=56.85 Aligned_cols=103 Identities=22% Similarity=0.287 Sum_probs=71.9
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHH----HcCCCEeeccCCCCcchhHHHHHh
Q 020928 128 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKI 202 (319)
Q Consensus 128 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~i~~~ 202 (319)
.++...++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .|..+.+
T Consensus 72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~--- 144 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGV--- 144 (322)
T ss_pred HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcc---
Confidence 34557788999999999985 9999999998764 25899999988666554 35654433221 1221111
Q ss_pred hhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEe
Q 020928 203 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 203 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
. ....+|+|+.+.+.........+.|+++|+++..
T Consensus 145 ~--~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 145 P--EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred c--ccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 1 1246999999888665667788999999998764
No 156
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.49 E-value=0.00058 Score=58.98 Aligned_cols=127 Identities=21% Similarity=0.390 Sum_probs=73.2
Q ss_pred CceEeCCCCCChhhhhccchhHHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH--
Q 020928 102 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-- 179 (319)
Q Consensus 102 ~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-- 179 (319)
..++.|.+++.|-...- ++...+...+++. .+++++||=+|+|+ |.++|..++ +|+++|+++|..+...+.+++
T Consensus 129 ~~~I~idPg~AFGTG~H-~TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~ 204 (295)
T PF06325_consen 129 EIVIEIDPGMAFGTGHH-PTTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENA 204 (295)
T ss_dssp SEEEEESTTSSS-SSHC-HHHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHH
T ss_pred cEEEEECCCCcccCCCC-HHHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHH
Confidence 44455555555433311 1122223333333 67888999999876 777766666 599899999999887666554
Q ss_pred --cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCChH---HHHHHHHhhcCCCEEEEecccC
Q 020928 180 --LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK---TMSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 180 --~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~~~---~~~~~~~~l~~~G~~v~~g~~~ 243 (319)
-+....+.... ..+ .....+|+|+-++-.+- ....+.++|+++|.++..|...
T Consensus 205 ~~N~~~~~~~v~~-~~~----------~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~ 262 (295)
T PF06325_consen 205 ELNGVEDRIEVSL-SED----------LVEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILE 262 (295)
T ss_dssp HHTT-TTCEEESC-TSC----------TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEG
T ss_pred HHcCCCeeEEEEE-ecc----------cccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccH
Confidence 23222111111 011 11367999998887652 3445566889999999988544
No 157
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.48 E-value=0.0026 Score=51.25 Aligned_cols=83 Identities=20% Similarity=0.288 Sum_probs=60.3
Q ss_pred CCCeEEEEC-C-CHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-HcCCCE-eeccCCCCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-S-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~i~~~~~~~~~~~d 211 (319)
....|||.| + |++|.+...-..+.|+ .|+++.++-+....+. ++|... -.|+ +++++..+....+++...++.|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCceE
Confidence 356789987 3 9999998888888899 8999988888777666 566322 2332 3444555555666665678899
Q ss_pred EEEEccCCh
Q 020928 212 VSFDCVGFD 220 (319)
Q Consensus 212 ~v~d~~g~~ 220 (319)
+.++..|.+
T Consensus 84 ~L~NNAG~~ 92 (289)
T KOG1209|consen 84 LLYNNAGQS 92 (289)
T ss_pred EEEcCCCCC
Confidence 999999875
No 158
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.48 E-value=0.0011 Score=50.64 Aligned_cols=73 Identities=19% Similarity=0.278 Sum_probs=52.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCCC--EeeccCCCCcchhHHHHHhhhhcCCCccE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~--~v~~~~~~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
.+.+++|+|+|++|.+++..+...|++.+.++.++.++.+.+ ++++.. ..+.++ + +.+. -..+|+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~----~~~~----~~~~Di 78 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----D----LEEA----LQEADI 78 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----G----HCHH----HHTESE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----H----HHHH----HhhCCe
Confidence 578999999999999999999999998899999998876655 445322 122221 1 1111 136999
Q ss_pred EEEccCCh
Q 020928 213 SFDCVGFD 220 (319)
Q Consensus 213 v~d~~g~~ 220 (319)
||+|.+.+
T Consensus 79 vI~aT~~~ 86 (135)
T PF01488_consen 79 VINATPSG 86 (135)
T ss_dssp EEE-SSTT
T ss_pred EEEecCCC
Confidence 99998875
No 159
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.47 E-value=0.00073 Score=55.48 Aligned_cols=105 Identities=20% Similarity=0.287 Sum_probs=68.7
Q ss_pred HHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCC-eEEEecCChhHHHHH----HHcCCCEeeccCCCCcchhHHHH
Q 020928 126 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVG 200 (319)
Q Consensus 126 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~i~ 200 (319)
...++...+++|++||-+|+|+ |..+.-+++..|.. +|++++..++-.+.+ ++++.+.+..... |-...
T Consensus 62 a~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g---dg~~g-- 135 (209)
T PF01135_consen 62 ARMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG---DGSEG-- 135 (209)
T ss_dssp HHHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES----GGGT--
T ss_pred HHHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc---chhhc--
Confidence 3355667899999999999887 88888888888754 588998887654444 4456543322111 11111
Q ss_pred HhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEe
Q 020928 201 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 201 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
+. ....||.|+-+.+-+......++.|+++|+++..
T Consensus 136 -~~--~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 136 -WP--EEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp -TG--GG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred -cc--cCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 11 2357999998888776778899999999999874
No 160
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.45 E-value=0.0043 Score=51.29 Aligned_cols=103 Identities=15% Similarity=0.226 Sum_probs=69.3
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHh
Q 020928 128 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI 202 (319)
Q Consensus 128 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~ 202 (319)
.+...+++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++ .+...+..... |.... +
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~g---d~~~~---~ 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVG---DGTLG---Y 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---CcccC---C
Confidence 44567789999999999877 7788888887753 279999999887766654 34322211111 11000 0
Q ss_pred hhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEe
Q 020928 203 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 203 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
.....||.|+-+.........+.+.|+++|+++..
T Consensus 141 --~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 141 --EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred --CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 12357999876555555677889999999998875
No 161
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.36 E-value=0.0063 Score=51.00 Aligned_cols=105 Identities=19% Similarity=0.196 Sum_probs=64.9
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcC---CCEeeccCCC-CcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG---ADETAKVSTD-IEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g---~~~v~~~~~~-~~~~~~~i~~~~~~~~~~ 209 (319)
.+++++|+| +|.+|..+++.+...|+ .|+.+++++++.+.+ +++. ..+.+..+-. .++....+++.... -++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV-LNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 467999998 59999999999999999 678888887766554 2222 1122222211 11222222222221 246
Q ss_pred ccEEEEccCCh-----------------------HHHHHHHHhhcCCCEEEEeccc
Q 020928 210 IDVSFDCVGFD-----------------------KTMSTALNATRPGGKVCLIGLA 242 (319)
Q Consensus 210 ~d~v~d~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~~ 242 (319)
+|.++.+.+.. ...+...++++.+|+++.++..
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 89999888742 1244555667778999988753
No 162
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.30 E-value=0.0083 Score=44.59 Aligned_cols=102 Identities=20% Similarity=0.284 Sum_probs=67.4
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhh
Q 020928 130 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 130 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~ 205 (319)
....++++++++-+|+|. |..+..+++..+...+++++.++...+.+++ ++...+..... +.......
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~---- 84 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALED---- 84 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccChh----
Confidence 445677788899999887 8889999998754589999999887776643 44332211111 11000101
Q ss_pred cCCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEe
Q 020928 206 MGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 206 ~~~~~d~v~d~~g~---~~~~~~~~~~l~~~G~~v~~ 239 (319)
....+|.|+-..+. ...++.+.+.|+++|+++..
T Consensus 85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 13479999875433 23678899999999998864
No 163
>PRK14967 putative methyltransferase; Provisional
Probab=97.30 E-value=0.0068 Score=50.54 Aligned_cols=100 Identities=24% Similarity=0.299 Sum_probs=65.3
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhh
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~ 204 (319)
+....++++++||-.|+|. |..++.+++. +..++++++.+++..+.+++ .+....+ .. .++.+. +
T Consensus 29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~-~~---~d~~~~---~-- 97 (223)
T PRK14967 29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDV-RR---GDWARA---V-- 97 (223)
T ss_pred HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEE-EE---Cchhhh---c--
Confidence 4445678899999999988 8888888875 55589999999987776554 3332111 11 122221 1
Q ss_pred hcCCCccEEEEccC--------------------C-------hHHHHHHHHhhcCCCEEEEec
Q 020928 205 AMGSGIDVSFDCVG--------------------F-------DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 205 ~~~~~~d~v~d~~g--------------------~-------~~~~~~~~~~l~~~G~~v~~g 240 (319)
....+|+|+...+ + ...+..+.+.|+++|+++.+.
T Consensus 98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 1357999986521 0 113456778999999988653
No 164
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0027 Score=54.73 Aligned_cols=82 Identities=18% Similarity=0.251 Sum_probs=54.9
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEe-eccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
.+++++|+| +|.+|..+++.+...|. .|+++++++++.+.+.+.+...+ .|+ .+.++....+..+.+..++.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDY-AEPESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccC-CCHHHHHHHHHHHHHHcCCCccEE
Confidence 467899998 59999999998888898 68888888887776666554332 122 222233333444433334579999
Q ss_pred EEccCC
Q 020928 214 FDCVGF 219 (319)
Q Consensus 214 ~d~~g~ 219 (319)
|++.|.
T Consensus 81 i~~Ag~ 86 (277)
T PRK05993 81 FNNGAY 86 (277)
T ss_pred EECCCc
Confidence 998763
No 165
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.27 E-value=0.0064 Score=50.37 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=67.4
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHh
Q 020928 128 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI 202 (319)
Q Consensus 128 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~ 202 (319)
.++...++++++||-+|+|. |..++.+++..+. ..|++++.+++..+.+++ ++.+.+..... +.... +
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~---~ 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQG---W 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccC---C
Confidence 44557789999999999877 7777788887653 258999999887766654 44432221111 11110 0
Q ss_pred hhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEe
Q 020928 203 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 203 ~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
. ....||+|+-..........+.+.|+++|+++..
T Consensus 142 ~--~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 142 E--PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred c--ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 0 1247999875544444667788999999998764
No 166
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.18 E-value=0.0011 Score=48.62 Aligned_cols=93 Identities=25% Similarity=0.415 Sum_probs=63.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHH-cCCCeEEEecCChhHHHHHHHc----CC-CEeeccCCCCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNL----GA-DETAKVSTDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~~----g~-~~v~~~~~~~~~~~~~i~~~~~~~~~~ 209 (319)
|+.+||-+|+|. |..++.+++. .++ ++++++.+++..+.+++. +. +.+.... .++ . .......+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~----~~~~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-E----FDPDFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-H----GGTTTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-c----cCcccCCC
Confidence 678999999887 8888888885 566 899999999988887762 21 2221111 122 1 11112457
Q ss_pred ccEEEEcc-CCh---------HHHHHHHHhhcCCCEEEE
Q 020928 210 IDVSFDCV-GFD---------KTMSTALNATRPGGKVCL 238 (319)
Q Consensus 210 ~d~v~d~~-g~~---------~~~~~~~~~l~~~G~~v~ 238 (319)
+|+|+... ... ..++.+.+.|+|+|+++.
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 99999876 211 237888899999999875
No 167
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.16 E-value=0.013 Score=48.10 Aligned_cols=103 Identities=15% Similarity=0.208 Sum_probs=67.7
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC-CCeEEEecCChhHHHHHHH----cCCCE-eeccCCCCcchhHHHHH
Q 020928 128 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGK 201 (319)
Q Consensus 128 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~i~~ 201 (319)
.++...++++++||-+|+|. |..+..+++..+ ...|++++.+++..+.+++ .+... +..... +..+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~---d~~~~--- 136 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG---DGKRG--- 136 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC---CcccC---
Confidence 34557788999999999877 777778888764 2279999999886665543 44321 111111 11111
Q ss_pred hhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEe
Q 020928 202 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 202 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
+. ....+|.|+-+.........+.+.|+++|+++..
T Consensus 137 ~~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 137 LE--KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred Cc--cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 11 1347999987666555667888999999998764
No 168
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.14 E-value=0.0043 Score=52.57 Aligned_cols=85 Identities=19% Similarity=0.177 Sum_probs=55.6
Q ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCC-----CEeeccCCCCcchhHHHHHhhhhcC
Q 020928 135 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGA-----DETAKVSTDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 135 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~-----~~v~~~~~~~~~~~~~i~~~~~~~~ 207 (319)
..+.+++|+| ++++|...+..+...|. .++-+.|++++++.+.+ +.- ..++..+-.+.+-...+.......+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 4678999999 59999999888888898 67777799988776643 331 1233333222222223332222234
Q ss_pred CCccEEEEccCCh
Q 020928 208 SGIDVSFDCVGFD 220 (319)
Q Consensus 208 ~~~d~v~d~~g~~ 220 (319)
..+|+.++++|-.
T Consensus 83 ~~IdvLVNNAG~g 95 (265)
T COG0300 83 GPIDVLVNNAGFG 95 (265)
T ss_pred CcccEEEECCCcC
Confidence 5799999999963
No 169
>PRK06182 short chain dehydrogenase; Validated
Probab=97.11 E-value=0.0086 Score=51.44 Aligned_cols=81 Identities=23% Similarity=0.288 Sum_probs=53.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEe-eccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
++.+++|+| +|.+|..+++.+...|. .|+.+++++++.+.+.+.+...+ .|+ .+.+++...+.++.+. .+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~-~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDV-TDEASIKAAVDTIIAE-EGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeC-CCHHHHHHHHHHHHHh-cCCCCEE
Confidence 357899998 59999999998888898 68888888777665544443322 122 2222333344444332 3579999
Q ss_pred EEccCC
Q 020928 214 FDCVGF 219 (319)
Q Consensus 214 ~d~~g~ 219 (319)
|++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999884
No 170
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.11 E-value=0.0071 Score=48.50 Aligned_cols=108 Identities=21% Similarity=0.242 Sum_probs=72.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEE
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 214 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~ 214 (319)
-.|.+|.|+|.|.+|..+++.++.+|. +|++.+++....+.....+... . + +.++. ...|+|+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~----~----~----l~ell----~~aDiv~ 96 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY----V----S----LDELL----AQADIVS 96 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE----S----S----HHHHH----HH-SEEE
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee----e----e----hhhhc----chhhhhh
Confidence 468999999999999999999999999 8999988887766444444311 1 2 22222 2478888
Q ss_pred EccCChH-----HHHHHHHhhcCCCEEEEecccCCcccccchHHHhcCcEEEEeeccCCCHHHHHHHHHcCCC
Q 020928 215 DCVGFDK-----TMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKI 282 (319)
Q Consensus 215 d~~g~~~-----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~ 282 (319)
.+....+ .-...+..|+++..++.++.... -+.+.+++.+++|++
T Consensus 97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~aRG~~-----------------------vde~aL~~aL~~g~i 146 (178)
T PF02826_consen 97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVARGEL-----------------------VDEDALLDALESGKI 146 (178)
T ss_dssp E-SSSSTTTTTSBSHHHHHTSTTTEEEEESSSGGG-----------------------B-HHHHHHHHHTTSE
T ss_pred hhhccccccceeeeeeeeeccccceEEEeccchhh-----------------------hhhhHHHHHHhhccC
Confidence 7776321 22456788999998888764321 235566777777776
No 171
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.04 E-value=0.0079 Score=53.80 Aligned_cols=97 Identities=14% Similarity=0.186 Sum_probs=64.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcC--CCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 138 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.+|||+|+|.+|+.+++.+.+.+-..|.+++++.++.+.+.... --....++.. +. +.+.++. .++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~--d~-~al~~li----~~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAA--DV-DALVALI----KDFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEeccc--Ch-HHHHHHH----hcCCEEEE
Confidence 47899999999999999988888458999999999888886653 1122222222 21 2233332 24599999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEEecc
Q 020928 216 CVGFDKTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 216 ~~g~~~~~~~~~~~l~~~G~~v~~g~ 241 (319)
+.+..-....+-.+++.+=.++.+..
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEccc
Confidence 99976334444456666666776654
No 172
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.01 E-value=0.004 Score=53.47 Aligned_cols=99 Identities=21% Similarity=0.392 Sum_probs=59.8
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhh
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~ 204 (319)
++++++++|++||-+|+|- |-.++.+|+..|+ .|.+++.|++..+.+++ .|....+.+.. .|+ +++
T Consensus 55 ~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~----~~~-- 124 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDY----RDL-- 124 (273)
T ss_dssp HTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-G----GG---
T ss_pred HHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eec----ccc--
Confidence 4668999999999999875 7788899999999 79999999988887753 45321111100 122 112
Q ss_pred hcCCCccEEEE-----ccCC---hHHHHHHHHhhcCCCEEEEe
Q 020928 205 AMGSGIDVSFD-----CVGF---DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 205 ~~~~~~d~v~d-----~~g~---~~~~~~~~~~l~~~G~~v~~ 239 (319)
...+|.|+. .+|. +..+..+.+.|+|+|+++.-
T Consensus 125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 237888753 4442 24578888999999998743
No 173
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.93 E-value=0.022 Score=48.72 Aligned_cols=107 Identities=22% Similarity=0.254 Sum_probs=63.9
Q ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCCE-eecc--C-CCCcchhHHHHHhhhhc
Q 020928 136 PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKV--S-TDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 136 ~~~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v~~~--~-~~~~~~~~~i~~~~~~~ 206 (319)
.++.|+|.|| +++|.++..-.-..|++.+.+ .+..++++.+ ++.+... ++.+ + ++.++....+.++.. .
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lv-ar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~-~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLV-ARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR-H 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEe-ehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH-h
Confidence 4678899995 999977777666678854444 4555555554 4444433 3222 1 222233333332222 3
Q ss_pred CCCccEEEEccCCh-------------------------HHHHHHHHhhcCC--CEEEEecccCC
Q 020928 207 GSGIDVSFDCVGFD-------------------------KTMSTALNATRPG--GKVCLIGLAKT 244 (319)
Q Consensus 207 ~~~~d~v~d~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~ 244 (319)
-+++|+.+++.|-. ...+.++++|+.. |+++.+++...
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 56899999998863 1345666777443 99999886443
No 174
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.93 E-value=0.011 Score=53.50 Aligned_cols=99 Identities=18% Similarity=0.306 Sum_probs=69.0
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCC
Q 020928 130 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 130 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~ 209 (319)
+..+++++++||.+|+|. |..++.+++..|+ .|++++.+++..+.+++......+.+. ..++ ..+ .+.
T Consensus 161 ~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~--~~D~----~~l----~~~ 228 (383)
T PRK11705 161 RKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIR--LQDY----RDL----NGQ 228 (383)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEE--ECch----hhc----CCC
Confidence 557889999999999875 7788899998888 799999999999988874321111111 1121 111 346
Q ss_pred ccEEEEc-----cCC---hHHHHHHHHhhcCCCEEEEec
Q 020928 210 IDVSFDC-----VGF---DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 210 ~d~v~d~-----~g~---~~~~~~~~~~l~~~G~~v~~g 240 (319)
+|.|+.. +|. +..++.+.+.|+|+|+++...
T Consensus 229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 8988643 332 246778888999999988654
No 175
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.90 E-value=0.018 Score=46.59 Aligned_cols=101 Identities=19% Similarity=0.280 Sum_probs=58.9
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHc-CCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCc
Q 020928 132 ANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 132 ~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~ 210 (319)
..++++++||.+|+|+-++ +..+++.. +..+|++++.++.. +..+.. .+..+.........+.+.. .+.++
T Consensus 28 ~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~--~~~~~ 99 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERV--GDDKV 99 (188)
T ss_pred cccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHh--CCCCc
Confidence 5679999999999887444 44444443 44479999988754 112222 2211111112112222111 24579
Q ss_pred cEEEEc-----cCC------------hHHHHHHHHhhcCCCEEEEec
Q 020928 211 DVSFDC-----VGF------------DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 211 d~v~d~-----~g~------------~~~~~~~~~~l~~~G~~v~~g 240 (319)
|+|+.. .|. ...+..+.+.|+++|+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 999952 121 246777889999999998753
No 176
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.85 E-value=0.018 Score=46.49 Aligned_cols=98 Identities=18% Similarity=0.243 Sum_probs=63.7
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhhcCC
Q 020928 133 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 133 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~~~~ 208 (319)
.++++.+||-+|+|. |..++.+++......|++++.+++..+.+++ .+.+.+..... +. .++.. ..
T Consensus 42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~----~~~~~--~~ 111 (187)
T PRK00107 42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RA----EEFGQ--EE 111 (187)
T ss_pred hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cH----hhCCC--CC
Confidence 356689999999876 7777777775544489999999877665553 44433211111 11 11211 34
Q ss_pred CccEEEEccCC--hHHHHHHHHhhcCCCEEEEec
Q 020928 209 GIDVSFDCVGF--DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 209 ~~d~v~d~~g~--~~~~~~~~~~l~~~G~~v~~g 240 (319)
.+|+|+-.... +..+..+.+.|+++|+++.+-
T Consensus 112 ~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 112 KFDVVTSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred CccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 79999864332 246778889999999998773
No 177
>PRK12742 oxidoreductase; Provisional
Probab=96.81 E-value=0.035 Score=46.43 Aligned_cols=100 Identities=20% Similarity=0.279 Sum_probs=59.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEec-CChhHHH-HHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD-VDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
+++++||+| +|.+|..+++.+...|+ .|+.+. +++++.+ +.++++... +..+.. +. +.+.++.+. .+++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~-~~~D~~--~~-~~~~~~~~~-~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATA-VQTDSA--DR-DAVIDVVRK-SGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeE-EecCCC--CH-HHHHHHHHH-hCCCcE
Confidence 467999998 59999999998888998 455543 3444433 334455432 222221 21 122223222 246899
Q ss_pred EEEccCChH-------------------------HHHHHHHhhcCCCEEEEecc
Q 020928 213 SFDCVGFDK-------------------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 213 v~d~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
+|++.|... ....+.+.+...|+++.++.
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 132 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGS 132 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 999987520 11344455667789998875
No 178
>PRK08017 oxidoreductase; Provisional
Probab=96.81 E-value=0.012 Score=49.99 Aligned_cols=80 Identities=21% Similarity=0.317 Sum_probs=52.5
Q ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEee-ccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 138 TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA-KVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 138 ~~vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
++++|+|+ |.+|..+++.+...|. .|++++++.++.+.+++.+...+. ++ ....+....+..+....++.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDL-DDPESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeec-CCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999985 9999999999888898 688888888887777766654322 22 11122222233332222356888888
Q ss_pred ccCC
Q 020928 216 CVGF 219 (319)
Q Consensus 216 ~~g~ 219 (319)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8764
No 179
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.79 E-value=0.012 Score=47.26 Aligned_cols=82 Identities=21% Similarity=0.299 Sum_probs=55.0
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCC---CEeeccCCCCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA---DETAKVSTDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~i~~~~~~~~~~~d 211 (319)
.|.+|||.| ++++|+...+-...+|- .|++..+++++++.++.... ..+-|+. +.....+.+..+.+ .-...+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~-d~~~~~~lvewLkk-~~P~lN 80 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVA-DRDSRRELVEWLKK-EYPNLN 80 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeeccc-chhhHHHHHHHHHh-hCCchh
Confidence 478999996 79999999998888896 78999999999998887442 2233321 11122222223333 234688
Q ss_pred EEEEccCCh
Q 020928 212 VSFDCVGFD 220 (319)
Q Consensus 212 ~v~d~~g~~ 220 (319)
+++++.|-.
T Consensus 81 vliNNAGIq 89 (245)
T COG3967 81 VLINNAGIQ 89 (245)
T ss_pred eeeeccccc
Confidence 999888863
No 180
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.79 E-value=0.034 Score=51.58 Aligned_cols=81 Identities=16% Similarity=0.259 Sum_probs=48.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChh--H-HHHHHHcCCCEe-eccCCCCcchhHHHHHhhhhcCCCc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--R-LSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~-~~~~~~~g~~~v-~~~~~~~~~~~~~i~~~~~~~~~~~ 210 (319)
++.++||+| +|.+|..+++.+...|+ +|+.+++.+. . .+..++++...+ .|+ .+..+....+..+.+. .+++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~-~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDI-TAPDAPARIAEHLAER-HGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeC-CCHHHHHHHHHHHHHh-CCCC
Confidence 468899998 59999999998888998 5777665332 2 233344554322 222 1222222233333222 3479
Q ss_pred cEEEEccCC
Q 020928 211 DVSFDCVGF 219 (319)
Q Consensus 211 d~v~d~~g~ 219 (319)
|++|++.|.
T Consensus 286 d~vi~~AG~ 294 (450)
T PRK08261 286 DIVVHNAGI 294 (450)
T ss_pred CEEEECCCc
Confidence 999999983
No 181
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.76 E-value=0.056 Score=43.98 Aligned_cols=104 Identities=13% Similarity=0.280 Sum_probs=63.3
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhh
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~ 204 (319)
+...+++++++||=.|+|. |..++.+++......|++++.+++..+.+++ ++...+.... .+..+.+..+
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~-- 106 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQL-- 106 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhC--
Confidence 3456788899988888765 6566677766533489999999988776654 4543322111 1222222111
Q ss_pred hcCCCccE-EEEccCC-hHHHHHHHHhhcCCCEEEEec
Q 020928 205 AMGSGIDV-SFDCVGF-DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 205 ~~~~~~d~-v~d~~g~-~~~~~~~~~~l~~~G~~v~~g 240 (319)
...+|. .++.... ...++.+.+.|+++|+++...
T Consensus 107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 122344 4443222 356788899999999988764
No 182
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.043 Score=45.82 Aligned_cols=81 Identities=20% Similarity=0.207 Sum_probs=48.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHH-HHHH---cCCCEeeccCC-CCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARN---LGADETAKVST-DIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~---~g~~~v~~~~~-~~~~~~~~i~~~~~~~~~~ 209 (319)
++.++||+| +|.+|..+++.+...|+ +|+.+++++++.+ .+++ .+... +..+- +.++....+.++.+.. ++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~-~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRI-GGIDLVDPQAARRAVDEVNRQF-GR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceE-EEeecCCHHHHHHHHHHHHHHh-CC
Confidence 367999998 59999999998888898 6888877665422 2222 22222 11111 1222223333333322 47
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 8999998874
No 183
>PRK00811 spermidine synthase; Provisional
Probab=96.70 E-value=0.013 Score=50.73 Aligned_cols=98 Identities=16% Similarity=0.150 Sum_probs=64.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCC--------CEeeccCCCCcchhHHHHHhhhhc
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~--------~~v~~~~~~~~~~~~~i~~~~~~~ 206 (319)
+++++||++|+|. |..+..+++..+..+|.+++.+++-.+.+++.-. +.-+.+ ...|....+. ..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v--~~~Da~~~l~----~~ 147 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVEL--VIGDGIKFVA----ET 147 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEE--EECchHHHHh----hC
Confidence 4578999999876 7777788887777789999999998888887321 100000 1123222222 23
Q ss_pred CCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEe
Q 020928 207 GSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 207 ~~~~d~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~ 239 (319)
...+|+||--... .+.++.+.+.|+++|.++.-
T Consensus 148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 148 ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 4679998754321 23467788999999998864
No 184
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.015 Score=49.94 Aligned_cols=79 Identities=22% Similarity=0.265 Sum_probs=52.4
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEe-eccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.++||+| +|.+|..+++.+...|+ .|+.+++++++.+.+...+...+ .|+ .+.++....+..+.+. .+++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDV-NDGAALARLAEELEAE-HGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeC-CCHHHHHHHHHHHHHh-cCCCCEEEE
Confidence 4789998 59999999998888898 68888888777666655554332 232 2222333333443332 357999999
Q ss_pred ccCC
Q 020928 216 CVGF 219 (319)
Q Consensus 216 ~~g~ 219 (319)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9984
No 185
>PRK04457 spermidine synthase; Provisional
Probab=96.68 E-value=0.029 Score=48.00 Aligned_cols=97 Identities=18% Similarity=0.174 Sum_probs=65.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc-CCCE---eeccCCCCcchhHHHHHhhhhcCCCc
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GADE---TAKVSTDIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~-g~~~---v~~~~~~~~~~~~~i~~~~~~~~~~~ 210 (319)
+++++||++|+|+ |..+..+++.....++.+++.+++-.+.+++. +... -+.+ ...|..+.+.+ ....+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v--~~~Da~~~l~~----~~~~y 137 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEV--IEADGAEYIAV----HRHST 137 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEE--EECCHHHHHHh----CCCCC
Confidence 4567899999877 88888888877555899999999999988874 3211 0111 11233333322 23578
Q ss_pred cEEE-EccCC---------hHHHHHHHHhhcCCCEEEE
Q 020928 211 DVSF-DCVGF---------DKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 211 d~v~-d~~g~---------~~~~~~~~~~l~~~G~~v~ 238 (319)
|+|+ |...+ .+.++.+.+.|+++|.++.
T Consensus 138 D~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 138 DVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred CEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 9985 43222 3578889999999999876
No 186
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.057 Score=46.02 Aligned_cols=104 Identities=21% Similarity=0.266 Sum_probs=63.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHH-HHHHcCCCE-eeccC-CCCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~~~d 211 (319)
.+.+++|+| +|.+|..++..+...|+ .|+.+++++++.+ ..++++... .+..+ .+.++....+.++.+.. +.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARF-GRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence 467899998 59999999998888898 6888888776544 334444221 11112 12223333444443322 4689
Q ss_pred EEEEccCCh---------H---------------HHHHHHHhh-cCCCEEEEecc
Q 020928 212 VSFDCVGFD---------K---------------TMSTALNAT-RPGGKVCLIGL 241 (319)
Q Consensus 212 ~v~d~~g~~---------~---------------~~~~~~~~l-~~~G~~v~~g~ 241 (319)
+++.+.|.. + ..+.+.+.+ +.+|+++.++.
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS 137 (261)
T PRK08265 83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTS 137 (261)
T ss_pred EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence 999988741 0 123334444 56789988874
No 187
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.63 E-value=0.017 Score=49.33 Aligned_cols=131 Identities=15% Similarity=0.220 Sum_probs=86.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCC---------CCcchhHHHHHhhhh
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST---------DIEDVDTDVGKIQNA 205 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~---------~~~~~~~~i~~~~~~ 205 (319)
-++.++++.|.|.+|+.++..++..|+ .|-.-+....+.+..+++|+...-.-+. -+++|...-.++...
T Consensus 162 v~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 162 VSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred ccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 356778999999999999999999999 6666677777888888888644321111 112332222223333
Q ss_pred cCCCccEEEEccCCh------HHHHHHHHhhcCCCEEEEecccC-Cccc--ccchHHHhcCcEEEEeecc
Q 020928 206 MGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAK-TEMT--VALTPAAAREVDVIGIFRY 266 (319)
Q Consensus 206 ~~~~~d~v~d~~g~~------~~~~~~~~~l~~~G~~v~~g~~~-~~~~--~~~~~~~~~~~~i~~~~~~ 266 (319)
.-.++|+||-+.--| -....+...|+|++.++.+.... ..-. -+-.-...++++|+|....
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl 310 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL 310 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence 456899999876553 24567889999999999886422 1111 1113345678999998765
No 188
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=96.56 E-value=0.11 Score=44.85 Aligned_cols=60 Identities=27% Similarity=0.355 Sum_probs=46.8
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEec--CChhHHHHHHHcCCCEeec
Q 020928 128 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAK 187 (319)
Q Consensus 128 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~~g~~~v~~ 187 (319)
+.+++.+++|.+|+---+|+.|.+...+|+.+|++.++++. -++++..+++.+|+.-+..
T Consensus 53 Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 53 AEKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT 114 (300)
T ss_pred HHHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence 34557799999655544799999999999999997666663 4778999999999876543
No 189
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.56 E-value=0.033 Score=46.47 Aligned_cols=107 Identities=21% Similarity=0.331 Sum_probs=72.3
Q ss_pred HHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHH
Q 020928 126 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVG 200 (319)
Q Consensus 126 ~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~ 200 (319)
.+.+.+.++.+|++|+-.|+|+ |.++.-||+..|. -+|+..+..++..+.+++ ++....+.. ...|..+.+
T Consensus 84 ~~I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~--~~~Dv~~~~- 159 (256)
T COG2519 84 GYIVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTL--KLGDVREGI- 159 (256)
T ss_pred HHHHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEE--Eeccccccc-
Confidence 3445678999999999999887 8888899987775 478888888776665544 443332211 112222211
Q ss_pred HhhhhcCCCccEEEEccCC-hHHHHHHHHhhcCCCEEEEecc
Q 020928 201 KIQNAMGSGIDVSFDCVGF-DKTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 201 ~~~~~~~~~~d~v~d~~g~-~~~~~~~~~~l~~~G~~v~~g~ 241 (319)
.+..+|.+|=-... .+.++.+.+.|.++|.++.+..
T Consensus 160 -----~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 160 -----DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred -----cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 13478887544443 3678889999999999998753
No 190
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.059 Score=45.39 Aligned_cols=82 Identities=15% Similarity=0.127 Sum_probs=49.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HH---cCCC-EeeccCCC-CcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGAD-ETAKVSTD-IEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---~g~~-~v~~~~~~-~~~~~~~i~~~~~~~~~ 208 (319)
++.+++|+| +|.+|..++..+...|. +++.+++++++.+.+ ++ .+.. ..+..+-. .++....+.++.+. -+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA-LG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 468899998 59999999998888898 677777776654433 22 2322 12221221 12222223333222 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 191
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.025 Score=48.04 Aligned_cols=81 Identities=21% Similarity=0.306 Sum_probs=50.9
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCCCEeeccCCC-CcchhHHHHHhhhhcCCCccE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTD-IEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v~~~~~~-~~~~~~~i~~~~~~~~~~~d~ 212 (319)
++++++|+| +|.+|..+++.+...|+ .|+.+++++.+.+.+ ++++.. .+..+-. .++....+.++.+. .+++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAET-YGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 468999998 59999999998888898 677777777665443 344432 2222221 22233333333322 246899
Q ss_pred EEEccCC
Q 020928 213 SFDCVGF 219 (319)
Q Consensus 213 v~d~~g~ 219 (319)
+|.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 192
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.065 Score=44.75 Aligned_cols=82 Identities=29% Similarity=0.278 Sum_probs=49.7
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCC---CEeeccC-CCCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGA---DETAKVS-TDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~---~~v~~~~-~~~~~~~~~i~~~~~~~~~~ 209 (319)
.+.+++|+| +|.+|..+++.+...|+ .|+++++++++.+.+ +++.. .+.+..+ .+..++...+..+.+. ..+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 467899998 59999999987777898 588888877655433 33321 1112112 1222333333333332 247
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
No 193
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.54 E-value=0.064 Score=46.21 Aligned_cols=104 Identities=20% Similarity=0.248 Sum_probs=63.2
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHcCCCeEEEecCChh---HHH-HHHHcCCCEeeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQ---RLS-IARNLGADETAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~-~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
.++++||+|+ +++|.++++.+...|+ +|+.+.++++ +.+ ..++++....+..+ .+.++....+.++.+. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~-~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKD-L 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHH-c
Confidence 3678999985 5899999998888899 5666666642 222 22344533222222 2222333444444433 2
Q ss_pred CCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEecc
Q 020928 208 SGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 208 ~~~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
+.+|+++++.|.. + ..+..++.|..+|+++.++.
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS 144 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSY 144 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEec
Confidence 5799999998841 0 23456667777899988764
No 194
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.54 E-value=0.04 Score=44.11 Aligned_cols=91 Identities=14% Similarity=0.187 Sum_probs=59.4
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 140 VMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 140 vlI~G~-g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
|+|+|+ |.+|..+++.+...|. .|.++.+++++.+. ..+... +..+.. +. +.+.+.. .++|.||.++|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~-~~~d~~--d~-~~~~~al----~~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEI-IQGDLF--DP-DSVKAAL----KGADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEE-EESCTT--CH-HHHHHHH----TTSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--cccccc-ceeeeh--hh-hhhhhhh----hhcchhhhhhh
Confidence 688985 9999999999999997 78888898887766 333332 222222 22 2232222 37999999998
Q ss_pred C----hHHHHHHHHhhcCCC--EEEEecc
Q 020928 219 F----DKTMSTALNATRPGG--KVCLIGL 241 (319)
Q Consensus 219 ~----~~~~~~~~~~l~~~G--~~v~~g~ 241 (319)
. ......+.+.++..| +++.++.
T Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~ 98 (183)
T PF13460_consen 70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSS 98 (183)
T ss_dssp STTTHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred hhcccccccccccccccccccccceeeec
Confidence 4 224555556554443 7777664
No 195
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.026 Score=50.09 Aligned_cols=82 Identities=32% Similarity=0.408 Sum_probs=51.9
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCCE-eeccC-CCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~ 208 (319)
.++++||+| +|++|.++++.+...|+ +|+.+++++++.+.+ ++.+... ++..+ ++.++....+.++.+ ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS-FGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-hcC
Confidence 467899998 59999999998888999 677788887765433 2345432 11111 122233333333332 235
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999984
No 196
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.50 E-value=0.079 Score=43.69 Aligned_cols=101 Identities=15% Similarity=0.120 Sum_probs=63.7
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhh
Q 020928 128 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ 203 (319)
Q Consensus 128 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~ 203 (319)
.+...+++++.+||-+|+|. |..+..+++..+ .+++++.+++..+.+++ .+...+..... +.... +.
T Consensus 70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~~--~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~---~~ 140 (212)
T PRK00312 70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLVR--RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWKG---WP 140 (212)
T ss_pred HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHhC--EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---CcccC---CC
Confidence 34557789999999998766 656666666643 78999988877665544 34332211111 11110 11
Q ss_pred hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEe
Q 020928 204 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 204 ~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
....+|.|+-...-......+.+.|+++|+++..
T Consensus 141 --~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 141 --AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred --cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence 1246999876554445667788999999998754
No 197
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.48 E-value=0.057 Score=45.14 Aligned_cols=107 Identities=21% Similarity=0.400 Sum_probs=74.3
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc----CCCEeeccCCCCcchhHHHHHhhhhc
Q 020928 131 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 131 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~i~~~~~~~ 206 (319)
..+.++|++||=.|+|. |-.++.+++..|-..|+++|.+++-++.+++- +... +.+... ....+. -.
T Consensus 46 ~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~------dAe~LP-f~ 116 (238)
T COG2226 46 LLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG------DAENLP-FP 116 (238)
T ss_pred hhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe------chhhCC-CC
Confidence 35667999999887776 88999999999866899999999988877762 2111 111111 111111 12
Q ss_pred CCCccEEEEccCC------hHHHHHHHHhhcCCCEEEEecccCCcc
Q 020928 207 GSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLAKTEM 246 (319)
Q Consensus 207 ~~~~d~v~d~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~~ 246 (319)
++.||+|.-+.|- +..+.++.+.|+|+|+++.+.......
T Consensus 117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~~ 162 (238)
T COG2226 117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPDN 162 (238)
T ss_pred CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCCc
Confidence 5678888666554 246889999999999999988665443
No 198
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.48 E-value=0.014 Score=49.99 Aligned_cols=97 Identities=16% Similarity=0.296 Sum_probs=70.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
++.+|.|+|.|.+|.-+..+|..+|+ .|.+.+.+..|++.++.+....+..+.+... .+++.. .+.|++|.
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~----~iee~v----~~aDlvIg 237 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPS----NIEEAV----KKADLVIG 237 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHH----HHHHHh----hhccEEEE
Confidence 34567888999999999999999999 6889999999999988855444433322222 222221 36889988
Q ss_pred ccCCh------HHHHHHHHhhcCCCEEEEecc
Q 020928 216 CVGFD------KTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 216 ~~g~~------~~~~~~~~~l~~~G~~v~~g~ 241 (319)
++=.+ -..+++.+.|++++.++.+..
T Consensus 238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAi 269 (371)
T COG0686 238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAI 269 (371)
T ss_pred EEEecCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence 76443 246788999999999998863
No 199
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.031 Score=47.37 Aligned_cols=83 Identities=18% Similarity=0.324 Sum_probs=52.3
Q ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-c---CC-CEeeccCC-CCcchhHHHHHhhhhcC
Q 020928 135 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L---GA-DETAKVST-DIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 135 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~---g~-~~v~~~~~-~~~~~~~~i~~~~~~~~ 207 (319)
-.+++++|+| +|.+|..++..+...|+ .|+.+.+++++.+.+.+ + +. ...+..+- +.++....+.++.+. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE-A 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh-c
Confidence 3478999998 59999999998888898 68888887776544332 1 21 12222221 222333333333332 3
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+.+|++|++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 578999999984
No 200
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.47 E-value=0.099 Score=40.78 Aligned_cols=104 Identities=20% Similarity=0.234 Sum_probs=65.0
Q ss_pred HHHHHHh--cCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHh
Q 020928 125 GVHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 202 (319)
Q Consensus 125 a~~~l~~--~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~ 202 (319)
.+.++.+ ...-.|++++|+|=|-+|...++.++.+|+ +|++++..+-+.-.+..-|... .. +.+.
T Consensus 9 ~~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~~-----------~~~a 75 (162)
T PF00670_consen 9 LVDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-MT-----------LEEA 75 (162)
T ss_dssp HHHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E------------HHHH
T ss_pred HHHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-cC-----------HHHH
Confidence 3445433 345678999999999999999999999999 8999998887665555445432 11 1111
Q ss_pred hhhcCCCccEEEEccCChHH-HHHHHHhhcCCCEEEEecccCCc
Q 020928 203 QNAMGSGIDVSFDCVGFDKT-MSTALNATRPGGKVCLIGLAKTE 245 (319)
Q Consensus 203 ~~~~~~~~d~v~d~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~~ 245 (319)
-...|++|.+.|.... ..+.++.|+++..+...|....+
T Consensus 76 ----~~~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~E 115 (162)
T PF00670_consen 76 ----LRDADIFVTATGNKDVITGEHFRQMKDGAILANAGHFDVE 115 (162)
T ss_dssp ----TTT-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTS
T ss_pred ----HhhCCEEEECCCCccccCHHHHHHhcCCeEEeccCcCcee
Confidence 2357999999998653 35778889999877777754433
No 201
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.064 Score=45.60 Aligned_cols=81 Identities=28% Similarity=0.371 Sum_probs=49.8
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cC-C-CEeeccC-CCCcchhHHHHHhhhhcCCCccE
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LG-A-DETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g-~-~~v~~~~-~~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
+++||+| +|.+|..+++.+...|+ .|+.+++++++.+.+.+ .+ . ...+..+ .+..+..+.+..+.+...+++|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 4789998 59999999998888898 67788787776554433 32 1 1122112 12223333333333222457999
Q ss_pred EEEccCC
Q 020928 213 SFDCVGF 219 (319)
Q Consensus 213 v~d~~g~ 219 (319)
++.+.|.
T Consensus 81 vi~~ag~ 87 (260)
T PRK08267 81 LFNNAGI 87 (260)
T ss_pred EEECCCC
Confidence 9999885
No 202
>PRK04148 hypothetical protein; Provisional
Probab=96.45 E-value=0.1 Score=39.44 Aligned_cols=94 Identities=12% Similarity=0.155 Sum_probs=62.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
..++.+++++|.| .|......+...|. .|+++|.+++..+.+++.+.+.+.+ +-.+++. . + -.++|++
T Consensus 14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~d-Dlf~p~~--~---~----y~~a~li 81 (134)
T PRK04148 14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVD-DLFNPNL--E---I----YKNAKLI 81 (134)
T ss_pred cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEEC-cCCCCCH--H---H----HhcCCEE
Confidence 3456889999998 78755555557798 8999999999999998887655443 1111111 1 1 2468999
Q ss_pred EEccCChHHHHHHHHhhcCC-CEEEEe
Q 020928 214 FDCVGFDKTMSTALNATRPG-GKVCLI 239 (319)
Q Consensus 214 ~d~~g~~~~~~~~~~~l~~~-G~~v~~ 239 (319)
+..-..++....+.+.-+.- ..++..
T Consensus 82 ysirpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 82 YSIRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred EEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 98888877776666655433 334433
No 203
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.45 E-value=0.054 Score=51.11 Aligned_cols=46 Identities=20% Similarity=0.256 Sum_probs=37.5
Q ss_pred HhcCCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHH
Q 020928 130 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 176 (319)
Q Consensus 130 ~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~ 176 (319)
...+.+.++++||+| +|.+|..+++.+...|+ .|+++.++.++.+.
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~ 119 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES 119 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 347788999999998 59999999998888898 67777787776543
No 204
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.1 Score=43.91 Aligned_cols=104 Identities=19% Similarity=0.238 Sum_probs=58.8
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCh-hHHH-HH---HHcCCC-EeeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLS-IA---RNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~-~~---~~~g~~-~v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
++.++||+| +|.+|..++..+...|. .|+.+.++. ++.+ +. +..+.. ..+..+ .+.++....+.++.+. .
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE-F 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-C
Confidence 357899998 59999999998888898 566665543 2222 22 222321 111112 1222223333333322 2
Q ss_pred CCccEEEEccCCh-------------------HHHHHHHHhhcCCCEEEEecc
Q 020928 208 SGIDVSFDCVGFD-------------------KTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 208 ~~~d~v~d~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~ 241 (319)
.++|+++.+.|.. ..++.+.+.+...|+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 4689998887642 134455555566788887764
No 205
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.078 Score=47.11 Aligned_cols=82 Identities=21% Similarity=0.267 Sum_probs=50.5
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCCEe-eccC-CCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v-~~~~-~~~~~~~~~i~~~~~~~~~ 208 (319)
++.+++|+| +|++|..+++.+...|+ .|+.+++++++.+.+ ++.|.... +..+ .+.++....+..+.+.. +
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~-g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL-G 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC-C
Confidence 457899998 59999999998888898 677777877665433 23343221 1111 12223333333333322 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999885
No 206
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.083 Score=45.13 Aligned_cols=81 Identities=21% Similarity=0.221 Sum_probs=50.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-c----CCC-EeeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L----GAD-ETAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~-~v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
.++++||.| ++++|.++++.+...|+ +|+.+++++++.+.+.+ + +.. ..+..+ .+.++....+.++. . -
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~-~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N-I 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h-h
Confidence 467899998 59999999998888998 67778887766543332 2 221 112212 12223333333332 1 2
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+++|+++++.|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 469999999875
No 207
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.35 E-value=0.12 Score=42.37 Aligned_cols=93 Identities=15% Similarity=0.149 Sum_probs=58.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChh-HHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 214 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~ 214 (319)
.+.+|||+|+|.+|..-++.+...|+ .|.+++.... ..+.+.+.+--..+. . ++... . -.++++||
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~--~---~~~~~--d-----l~~~~lVi 74 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA--R---CFDAD--I-----LEGAFLVI 74 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe--C---CCCHH--H-----hCCcEEEE
Confidence 36799999999999999999999998 5666654332 222222333111111 1 11111 1 14689999
Q ss_pred EccCChHHHHHHHHhhcCCCEEEEecc
Q 020928 215 DCVGFDKTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 215 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 241 (319)
-+.+.++.-..+....+..|.++.+-.
T Consensus 75 ~at~d~~ln~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 75 AATDDEELNRRVAHAARARGVPVNVVD 101 (205)
T ss_pred ECCCCHHHHHHHHHHHHHcCCEEEECC
Confidence 999987666667666777787776543
No 208
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.33 E-value=0.072 Score=44.00 Aligned_cols=105 Identities=17% Similarity=0.166 Sum_probs=64.0
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCCCEeec-------cCCCCcc-hhHHHHHhhh
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAK-------VSTDIED-VDTDVGKIQN 204 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v~~-------~~~~~~~-~~~~i~~~~~ 204 (319)
.+++.+||+.|+|. |.-++.||. .|. .|++++.++...+.+ ++.+...... +....-+ ....+-++..
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 36778999999988 889988986 698 799999999987764 3333211000 0000000 0001111111
Q ss_pred hcCCCccEEEEccCC--------hHHHHHHHHhhcCCCEEEEecc
Q 020928 205 AMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 205 ~~~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~g~ 241 (319)
.....+|.++|...- ...++.+.++|+|+|+++....
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 012468999996531 2357789999999998766654
No 209
>PRK00536 speE spermidine synthase; Provisional
Probab=96.33 E-value=0.026 Score=47.96 Aligned_cols=101 Identities=6% Similarity=-0.144 Sum_probs=66.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
-++.++|||+|+|- |-++-.++|.-. +|+.++-.++-.++.+++-....-.++..+-.... .+.+.....+|+|
T Consensus 70 h~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~---~~~~~~~~~fDVI 143 (262)
T PRK00536 70 KKELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAK---QLLDLDIKKYDLI 143 (262)
T ss_pred CCCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEee---hhhhccCCcCCEE
Confidence 46679999998766 667788888753 79999999999999888321100011111111111 1222223579996
Q ss_pred -EEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 214 -FDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 214 -~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
+|+.-.++....+.++|+++|.++.=+
T Consensus 144 IvDs~~~~~fy~~~~~~L~~~Gi~v~Qs 171 (262)
T PRK00536 144 ICLQEPDIHKIDGLKRMLKEDGVFISVA 171 (262)
T ss_pred EEcCCCChHHHHHHHHhcCCCcEEEECC
Confidence 565666778889999999999887643
No 210
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.32 E-value=0.017 Score=49.58 Aligned_cols=45 Identities=22% Similarity=0.296 Sum_probs=39.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN 179 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~ 179 (319)
.++++++|.|+|+.+.+++.-+...|++++.++.++.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 357999999999999999999999999899999998888665554
No 211
>PLN02366 spermidine synthase
Probab=96.32 E-value=0.046 Score=47.81 Aligned_cols=102 Identities=22% Similarity=0.234 Sum_probs=64.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCE--eec---cCCCCcchhHHHHHhhhhcCC
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE--TAK---VSTDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--v~~---~~~~~~~~~~~i~~~~~~~~~ 208 (319)
.+++++||++|+|. |.++..+++.-+..+|.+++.+++-.+.+++.-... ..+ +.-...|....+++. .++
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~---~~~ 164 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNA---PEG 164 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhc---cCC
Confidence 45678999998776 667778888777668999999988888887732110 000 000011222222211 245
Q ss_pred CccEEEEccCC----------hHHHHHHHHhhcCCCEEEEe
Q 020928 209 GIDVSFDCVGF----------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 209 ~~d~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~ 239 (319)
.+|+||--... .+.++.+.++|+++|.++.-
T Consensus 165 ~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q 205 (308)
T PLN02366 165 TYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ 205 (308)
T ss_pred CCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence 79998653332 24578889999999998753
No 212
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.32 E-value=0.11 Score=43.70 Aligned_cols=82 Identities=20% Similarity=0.220 Sum_probs=49.9
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcC--CC-EeeccC-CCCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG--AD-ETAKVS-TDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g--~~-~v~~~~-~~~~~~~~~i~~~~~~~~~~ 209 (319)
++.++||+| +|.+|..+++.+...|. .|+.+++++++.+.+ ..+. .. ..+..+ .+.+++...+.++... ...
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 456899998 59999999988888898 588888887665443 2232 11 111111 1122333333333222 246
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|.+|.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 213
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=96.31 E-value=0.046 Score=47.00 Aligned_cols=102 Identities=14% Similarity=0.121 Sum_probs=61.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcC-CC-Eeec---cCCCCcchhHHHHHhhhhcCC
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-AD-ETAK---VSTDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g-~~-~v~~---~~~~~~~~~~~i~~~~~~~~~ 208 (319)
.+.+++||++|+|. |..+..+++......+.+++.+++-.+.+++.- .. .... .+-...|....+++ ...
T Consensus 70 ~~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~----~~~ 144 (270)
T TIGR00417 70 HPNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD----TEN 144 (270)
T ss_pred CCCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh----CCC
Confidence 34556999998766 556667777665668999999988877777632 10 0000 00001222222222 245
Q ss_pred CccEEEEccC----------ChHHHHHHHHhhcCCCEEEEec
Q 020928 209 GIDVSFDCVG----------FDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 209 ~~d~v~d~~g----------~~~~~~~~~~~l~~~G~~v~~g 240 (319)
.+|+|+-... ..+.++.+.+.|+++|.++...
T Consensus 145 ~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 145 TFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred CccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 7999864332 1245678889999999998753
No 214
>PLN02823 spermine synthase
Probab=96.30 E-value=0.065 Score=47.43 Aligned_cols=99 Identities=17% Similarity=0.233 Sum_probs=62.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCC-CE-eec---cCCCCcchhHHHHHhhhhcCCC
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-DE-TAK---VSTDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~-~~-v~~---~~~~~~~~~~~i~~~~~~~~~~ 209 (319)
+..++|||+|.|. |.++..+++..+..++++++-+++-.++++++-. .. ... +.-...|....+ +.....
T Consensus 102 ~~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L----~~~~~~ 176 (336)
T PLN02823 102 PNPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAEL----EKRDEK 176 (336)
T ss_pred CCCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHH----hhCCCC
Confidence 3567999998765 6667778887777789999999999999988431 11 000 000012222222 223567
Q ss_pred ccEEEEccCC------------hHHHH-HHHHhhcCCCEEEE
Q 020928 210 IDVSFDCVGF------------DKTMS-TALNATRPGGKVCL 238 (319)
Q Consensus 210 ~d~v~d~~g~------------~~~~~-~~~~~l~~~G~~v~ 238 (319)
+|+||--... .+.++ .+.+.|+++|.++.
T Consensus 177 yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~ 218 (336)
T PLN02823 177 FDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVT 218 (336)
T ss_pred ccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEE
Confidence 9998543211 23455 78889999998764
No 215
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.29 E-value=0.085 Score=43.21 Aligned_cols=35 Identities=31% Similarity=0.499 Sum_probs=30.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
...+|+|+|+|++|..+++.+.+.|+.++..+|..
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 34789999999999999999999999888888765
No 216
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.047 Score=46.61 Aligned_cols=82 Identities=18% Similarity=0.258 Sum_probs=50.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-c---CCC-EeeccCCC-CcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L---GAD-ETAKVSTD-IEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~---g~~-~v~~~~~~-~~~~~~~i~~~~~~~~~ 208 (319)
++.++||.| +|.+|..+++.+...|+ .|+.+++++++.+.+.+ + +.. ..+..+-. .++....+.++.+.. +
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF-G 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 468899998 59999999998888899 78888887766543322 2 221 12222222 222222333333222 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|++|++.|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 217
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.047 Score=45.87 Aligned_cols=78 Identities=22% Similarity=0.382 Sum_probs=50.9
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
++.+++|+| +|.+|..+++.+...|. .|+.+++++++.+.+.+ .+.. .+..+-. + .+.+.++.+. ..++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~--~-~~~v~~~~~~-~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCE-PLRLDVG--D-DAAIRAALAA-AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCe-EEEecCC--C-HHHHHHHHHH-hCCCCEE
Confidence 467899998 59999999999988998 68888887766554433 4432 2222222 1 1233333332 2468999
Q ss_pred EEccCC
Q 020928 214 FDCVGF 219 (319)
Q Consensus 214 ~d~~g~ 219 (319)
|++.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 999985
No 218
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=96.24 E-value=0.066 Score=46.08 Aligned_cols=97 Identities=18% Similarity=0.207 Sum_probs=64.3
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc-CCCEeeccCCC----CcchhHHHHHhhhhcCCCccE
Q 020928 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GADETAKVSTD----IEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 138 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~-g~~~v~~~~~~----~~~~~~~i~~~~~~~~~~~d~ 212 (319)
++|||+|.|. |-.+-.+++.....++++++-.++-.++.+++ +....-..+.. ..|-.+.++ ....++|+
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~----~~~~~fDv 152 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLR----DCEEKFDV 152 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHH----hCCCcCCE
Confidence 6999997655 55777888888888999999999999999884 32221010111 112222222 23448999
Q ss_pred EE-EccCC---------hHHHHHHHHhhcCCCEEEEe
Q 020928 213 SF-DCVGF---------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 213 v~-d~~g~---------~~~~~~~~~~l~~~G~~v~~ 239 (319)
|| |+.-. .+..+.+.++|+++|.++.-
T Consensus 153 Ii~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 153 IIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred EEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 74 44333 35788999999999988765
No 219
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.23 E-value=0.066 Score=41.60 Aligned_cols=104 Identities=18% Similarity=0.284 Sum_probs=62.0
Q ss_pred HHHhcCC-CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHH-HHHcCCCEeeccCCCCcchhHHHHHhhhh
Q 020928 128 ACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADETAKVSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 128 ~l~~~~~-~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~i~~~~~~ 205 (319)
+++...+ .++.+++|+|+|.+|...++.+...|...+.+.++++++.+. .++++... +.... .+. .+.
T Consensus 9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~--~~~----~~~--- 78 (155)
T cd01065 9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAY--LDL----EEL--- 78 (155)
T ss_pred HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceee--cch----hhc---
Confidence 3444443 456889999999999999988888864478888888776554 45555321 00000 011 111
Q ss_pred cCCCccEEEEccCChHH----HHHHHHhhcCCCEEEEeccc
Q 020928 206 MGSGIDVSFDCVGFDKT----MSTALNATRPGGKVCLIGLA 242 (319)
Q Consensus 206 ~~~~~d~v~d~~g~~~~----~~~~~~~l~~~G~~v~~g~~ 242 (319)
-.++|+|+.|++.... .......++++..++.++..
T Consensus 79 -~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 79 -LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred -cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 2468999999886521 11112345666666666543
No 220
>PRK01581 speE spermidine synthase; Validated
Probab=96.22 E-value=0.074 Score=47.21 Aligned_cols=102 Identities=18% Similarity=0.142 Sum_probs=64.9
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcC-CCE----ee---ccCCCCcchhHHHHHhhhh
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-ADE----TA---KVSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g-~~~----v~---~~~~~~~~~~~~i~~~~~~ 205 (319)
....++|||+|+|. |.++..+++..+..+|++++.+++-.++++++. ... .. .+.-...|....+. .
T Consensus 148 h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~----~ 222 (374)
T PRK01581 148 VIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLS----S 222 (374)
T ss_pred CCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHH----h
Confidence 45567999999764 667777888766668999999999999988631 100 00 00000122222222 2
Q ss_pred cCCCccEEEEccCC-----------hHHHHHHHHhhcCCCEEEEec
Q 020928 206 MGSGIDVSFDCVGF-----------DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 206 ~~~~~d~v~d~~g~-----------~~~~~~~~~~l~~~G~~v~~g 240 (319)
....+|+||--... .+.+..+.+.|+++|.++.-.
T Consensus 223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 34579998654322 235678889999999987654
No 221
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.22 E-value=0.12 Score=43.90 Aligned_cols=82 Identities=24% Similarity=0.285 Sum_probs=49.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc---CCCE-eeccC-CCCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~---g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~~ 209 (319)
++.++||.| +|.+|..+++.+...|+ .|+.+++++...+..+++ +... .+..+ .+.++....+.++.+. .+.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA-FGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH-cCC
Confidence 357899998 59999999998888898 677777765433333332 3221 11111 1222333344444332 246
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|+++.+.|.
T Consensus 85 id~lv~nAg~ 94 (260)
T PRK12823 85 IDVLINNVGG 94 (260)
T ss_pred CeEEEECCcc
Confidence 9999999873
No 222
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.055 Score=46.38 Aligned_cols=81 Identities=28% Similarity=0.336 Sum_probs=50.8
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCCCEeeccC-CCCcchhHHHHHhhhhcCCCccEE
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v~~~~-~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
+.++||+| +|++|..+++.+...|+ .|+.+++++++.+.+ ++++....+..+ .+.+++...+..+.+.. +++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADL-GPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence 56899998 59999999987778898 577777877765543 334412222222 12223333344443322 479999
Q ss_pred EEccCC
Q 020928 214 FDCVGF 219 (319)
Q Consensus 214 ~d~~g~ 219 (319)
+++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999884
No 223
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.21 E-value=0.073 Score=48.60 Aligned_cols=74 Identities=15% Similarity=0.324 Sum_probs=52.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHH-HHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 214 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~ 214 (319)
.+.+++|+|+|.+|.+++..+...|+..+.++.++.++.+ ++.+++...++.+ +.+... -..+|+||
T Consensus 180 ~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~----l~~aDiVI 247 (414)
T PRK13940 180 SSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQL----IKKADIII 247 (414)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHH----hccCCEEE
Confidence 5678999999999999999999999888999999877654 4444542222221 122222 13589999
Q ss_pred EccCChH
Q 020928 215 DCVGFDK 221 (319)
Q Consensus 215 d~~g~~~ 221 (319)
+|++.+.
T Consensus 248 ~aT~a~~ 254 (414)
T PRK13940 248 AAVNVLE 254 (414)
T ss_pred ECcCCCC
Confidence 9999873
No 224
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.20 E-value=0.049 Score=46.82 Aligned_cols=82 Identities=23% Similarity=0.283 Sum_probs=49.1
Q ss_pred CCCeEEEECCC---HHHHHHHHHHHHcCCCeEEEecCChhHHH----HHHHcCCCEeeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADETAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G~g---~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
+++++||+|++ ++|.++.+.+...|+ +|+.+.++++..+ ..+++|....+..+ .+.++....+.++.+..
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~- 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW- 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh-
Confidence 46789999864 899999998888999 5666666543222 22334533222222 22233344444444332
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999999883
No 225
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.20 E-value=0.037 Score=50.25 Aligned_cols=93 Identities=18% Similarity=0.290 Sum_probs=57.3
Q ss_pred EEEECCCHHHHHHHHHHHHcCCC-eEEEecCChhHHHHHHH--cCC-CEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 140 VMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARN--LGA-DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 140 vlI~G~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~--~g~-~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
|+|+|+|.+|..+++.+...+-. .|++.+++.++.+.+.+ .+. ......+.. +. +.+.++. .+.|+|++
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~--~~-~~l~~~~----~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVN--DP-ESLAELL----RGCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TT--TH-HHHHHHH----TTSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecC--CH-HHHHHHH----hcCCEEEE
Confidence 68888899999999988876643 78999999998766654 221 111112211 21 2244443 35699999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEEe
Q 020928 216 CVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 216 ~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
|+|.......+..++..+-.++..
T Consensus 74 ~~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CCccchhHHHHHHHHHhCCCeecc
Confidence 999654455566677778888874
No 226
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.19 E-value=0.02 Score=45.46 Aligned_cols=100 Identities=19% Similarity=0.310 Sum_probs=64.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeec-cCCC--------------CcchhHHHH
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK-VSTD--------------IEDVDTDVG 200 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~-~~~~--------------~~~~~~~i~ 200 (319)
++.+|+|+|+|.+|+.|+.+++.+|+ .+++.+...++.+..+..+...+.. +... .......+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 34789999999999999999999999 7999999999888888877655433 1111 111111222
Q ss_pred HhhhhcCCCccEEEEccCCh------HHHHHHHHhhcCCCEEEEec
Q 020928 201 KIQNAMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 201 ~~~~~~~~~~d~v~d~~g~~------~~~~~~~~~l~~~G~~v~~g 240 (319)
+.. ..+|++|.+.--+ -.....++.|+++..++.+.
T Consensus 98 ~~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis 139 (168)
T PF01262_consen 98 EFI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS 139 (168)
T ss_dssp HHH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred HHH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence 221 2478887533211 12356778888888888775
No 227
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.06 Score=46.85 Aligned_cols=81 Identities=20% Similarity=0.338 Sum_probs=50.1
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCC-EeeccCC-CCcchhHHHHHhhhhcCCC
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVST-DIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~~ 209 (319)
+.+++|+| +|++|..+++.+...|. .|+.+++++++.+.+.+ .+.. ..+..+- +.++....+..+.+.. +.
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g~ 117 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI-GG 117 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 47899998 59999999998888898 68888888766543322 2322 1222221 1223333333333322 47
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|+++++.|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 228
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.16 E-value=0.056 Score=47.42 Aligned_cols=91 Identities=25% Similarity=0.350 Sum_probs=60.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEc
Q 020928 138 TNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 216 (319)
Q Consensus 138 ~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~ 216 (319)
.+|.|+|+|.+|......++..|. ..|++.++++++.+.+++.|...... . +.. +. -...|+||.|
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~--~---~~~----~~----~~~aDvViia 73 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT--T---SAA----EA----VKGADLVILC 73 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec--C---CHH----HH----hcCCCEEEEC
Confidence 579999999999999998888885 36888899998888888877432110 0 111 11 1357999999
Q ss_pred cCChH---HHHHHHHhhcCCCEEEEecc
Q 020928 217 VGFDK---TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 217 ~g~~~---~~~~~~~~l~~~G~~v~~g~ 241 (319)
+.... ....+...++++..++.++.
T Consensus 74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 74 VPVGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 88642 23333445667776666654
No 229
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.16 E-value=0.054 Score=46.14 Aligned_cols=104 Identities=16% Similarity=0.240 Sum_probs=61.8
Q ss_pred CCCeEEEECCC---HHHHHHHHHHHHcCCCeEEEecCChhHHH----HHHHcCCCEeeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADETAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G~g---~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
.++++||.|++ ++|.++++.+...|+ .|+.++++++..+ ..++++....+..+ .+.++....+.++.+..
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW- 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc-
Confidence 46789999853 899999988888898 5666666644322 22334432222222 22233333444444332
Q ss_pred CCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEecc
Q 020928 208 SGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 208 ~~~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
+.+|+++++.|.. + ..+.+++.|+.+|+++.++.
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss 149 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSY 149 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 4799999988731 0 13445666777788887764
No 230
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.044 Score=45.53 Aligned_cols=78 Identities=19% Similarity=0.219 Sum_probs=48.3
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCC-cchhHHHHHhhhhcCCCccEEEE
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI-EDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.+++|+| +|.+|...+..+...|. .|+.+++++++.+.+++++....+..+-.+ ++.......+ .+.++|++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence 4688998 69999998888778898 788888877766555554322222222111 1222222222 2347999998
Q ss_pred ccCC
Q 020928 216 CVGF 219 (319)
Q Consensus 216 ~~g~ 219 (319)
+.|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8764
No 231
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.15 E-value=0.045 Score=51.34 Aligned_cols=74 Identities=26% Similarity=0.374 Sum_probs=52.8
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccE
Q 020928 133 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 133 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
.+.++++|+|+|.|..|++++.+++..|+ .|++.+..+.+.+.++++|.... .. .+ ... .+ ..+|+
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~-~~---~~~---~l-----~~~D~ 73 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-ST-SD---AVQ---QI-----ADYAL 73 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cC-cc---hHh---Hh-----hcCCE
Confidence 35678999999999999999999999998 68888877666666677776332 11 11 011 11 24689
Q ss_pred EEEccCCh
Q 020928 213 SFDCVGFD 220 (319)
Q Consensus 213 v~d~~g~~ 220 (319)
|+.+-|.+
T Consensus 74 VV~SpGi~ 81 (488)
T PRK03369 74 VVTSPGFR 81 (488)
T ss_pred EEECCCCC
Confidence 99888875
No 232
>PRK06484 short chain dehydrogenase; Validated
Probab=96.14 E-value=0.14 Score=48.36 Aligned_cols=104 Identities=24% Similarity=0.331 Sum_probs=66.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCCCE-eeccC-CCCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~~~d 211 (319)
.++++||+| ++++|..+++.+...|+ .|+.+++++++.+.+.+ ++... .+..+ .+.++....+.++.+.. +.+|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARW-GRLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 567889998 69999999998888898 68888887776665544 44322 12122 12223333444443322 4699
Q ss_pred EEEEccCChH--------------------------HHHHHHHhhcCCCEEEEecc
Q 020928 212 VSFDCVGFDK--------------------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 212 ~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
++|++.|... ..+.+++.++.+|+++.++.
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS 401 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGS 401 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECc
Confidence 9999887420 13444556667799998875
No 233
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.14 E-value=0.062 Score=45.78 Aligned_cols=82 Identities=21% Similarity=0.248 Sum_probs=52.0
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCCC-EeeccC-CCCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~-~v~~~~-~~~~~~~~~i~~~~~~~~~~~d 211 (319)
+++++||+| ++.+|..+++.+...|+ .|+.+++++++.+.+.+ ++.. ..+..+ .+.++....+.++.+. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence 467899998 59999999998888898 67778887776655543 3321 112111 1222333344444333 24699
Q ss_pred EEEEccCC
Q 020928 212 VSFDCVGF 219 (319)
Q Consensus 212 ~v~d~~g~ 219 (319)
++|++.|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99999873
No 234
>PRK07574 formate dehydrogenase; Provisional
Probab=96.14 E-value=0.13 Score=46.47 Aligned_cols=92 Identities=21% Similarity=0.233 Sum_probs=62.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.|.+|.|+|.|.+|+.+.+.++.+|. .|.+.+++....+..+.++... +. + +.++. ...|+|+-
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~~----~----l~ell----~~aDvV~l 254 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---HV----S----FDSLV----SVCDVVTI 254 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---cC----C----HHHHh----hcCCEEEE
Confidence 46789999999999999999999999 7888887764444444444321 00 1 22222 35789888
Q ss_pred ccCChHHH-----HHHHHhhcCCCEEEEecccC
Q 020928 216 CVGFDKTM-----STALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 216 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 243 (319)
+....... ...+..|+++..++.++...
T Consensus 255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 287 (385)
T PRK07574 255 HCPLHPETEHLFDADVLSRMKRGSYLVNTARGK 287 (385)
T ss_pred cCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence 77643222 34677889999888887543
No 235
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.13 E-value=0.056 Score=44.10 Aligned_cols=97 Identities=18% Similarity=0.273 Sum_probs=61.9
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc----CCCEeeccCCCCcchhHHHHHhhhhc
Q 020928 131 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 131 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~i~~~~~~~ 206 (319)
..+..++.+||-+|+|. |..++.+|+. |. .|++++.+++..+.+++. +...+. ....++ .++. .
T Consensus 25 ~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~---~~~~d~----~~~~--~ 92 (197)
T PRK11207 25 AVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLH---TAVVDL----NNLT--F 92 (197)
T ss_pred hcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcce---EEecCh----hhCC--c
Confidence 34556778999999887 8888888875 76 799999999876666542 222111 000111 1111 1
Q ss_pred CCCccEEEEccCC--------hHHHHHHHHhhcCCCEEEEe
Q 020928 207 GSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 207 ~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~ 239 (319)
...+|+|+.+..- ...+..+.+.|+++|.++.+
T Consensus 93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 3469999875431 13567788899999996544
No 236
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.13 E-value=0.074 Score=44.82 Aligned_cols=82 Identities=18% Similarity=0.284 Sum_probs=50.0
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCCE-eeccCCC-CcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVSTD-IEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v~~~~~~-~~~~~~~i~~~~~~~~~ 208 (319)
+++++||.| +|.+|..+++.+...|. +|+.+++++++.+.+ ++.+... .+..+-. .++..+.+..+.+. -+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-FG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 467899998 59999999998888898 688888877654332 2233321 1222211 12222333333322 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|.+|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (253)
T PRK08217 82 QLNGLINNAGI 92 (253)
T ss_pred CCCEEEECCCc
Confidence 68999999873
No 237
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.12 E-value=0.032 Score=46.99 Aligned_cols=110 Identities=25% Similarity=0.398 Sum_probs=66.4
Q ss_pred HHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCC-eEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHH
Q 020928 127 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGK 201 (319)
Q Consensus 127 ~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~ 201 (319)
+.+...++.||++|+-.|+|+ |.+...|++..|-. +|+..+..+++.+.+++ .|....+.... .|....-
T Consensus 31 ~I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g-- 105 (247)
T PF08704_consen 31 YILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEG-- 105 (247)
T ss_dssp HHHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG---
T ss_pred HHHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceeccc--
Confidence 345678999999999998766 66777888876532 79999999988777654 45432222111 1221100
Q ss_pred hhhhcCCCccEEEEccCCh-HHHHHHHHhh-cCCCEEEEecc
Q 020928 202 IQNAMGSGIDVSFDCVGFD-KTMSTALNAT-RPGGKVCLIGL 241 (319)
Q Consensus 202 ~~~~~~~~~d~v~d~~g~~-~~~~~~~~~l-~~~G~~v~~g~ 241 (319)
+.+.....+|.||=-+..+ ..+..+.+.| +++|+++.+.-
T Consensus 106 ~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP 147 (247)
T PF08704_consen 106 FDEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP 147 (247)
T ss_dssp -STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred ccccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence 1011135688875444444 5788999999 89999998853
No 238
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.11 E-value=0.15 Score=45.06 Aligned_cols=101 Identities=11% Similarity=0.113 Sum_probs=66.3
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHH-HHHcCCCeEEEecCChhHHHHH-HHc----CCCEeeccCCCCcchhHHHHH
Q 020928 128 ACRRANVGPETNVMIMGSGPIGLVTLLA-ARAFGAPRIIITDVDVQRLSIA-RNL----GADETAKVSTDIEDVDTDVGK 201 (319)
Q Consensus 128 ~l~~~~~~~~~~vlI~G~g~vG~~ai~l-a~~~g~~~vv~v~~~~~~~~~~-~~~----g~~~v~~~~~~~~~~~~~i~~ 201 (319)
+.+...-+...+++|+|+|..|...+.. +...+++.|.+.++++++.+.+ +++ +.. +..+. +..+
T Consensus 118 a~~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~----~~~~---- 188 (325)
T PRK08618 118 ATKYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN----SADE---- 188 (325)
T ss_pred HHHHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC----CHHH----
Confidence 3344434567789999999999776654 4567888899999988876543 333 322 11111 2111
Q ss_pred hhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEecccC
Q 020928 202 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 202 ~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 243 (319)
.. .+.|+|+.|.++... -.. +.++++-.+..+|...
T Consensus 189 ~~----~~aDiVi~aT~s~~p-~i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 189 AI----EEADIIVTVTNAKTP-VFS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred HH----hcCCEEEEccCCCCc-chH-HhcCCCcEEEecCCCC
Confidence 11 368999999987633 334 8899999999998654
No 239
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.065 Score=46.69 Aligned_cols=81 Identities=27% Similarity=0.416 Sum_probs=52.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHH-HHHcCCC-Ee----eccCCCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGAD-ET----AKVSTDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~-~v----~~~~~~~~~~~~~i~~~~~~~~~ 208 (319)
+++++||+| +|++|..+++.+...|+ +|+.+++++++.+. .++++.. .+ .|+ .+.++....+.++.+.. +
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~-g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADV-TDLAAMQAAAEEAVERF-G 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-CCHHHHHHHHHHHHHHc-C
Confidence 468999998 59999999999888998 67878887776554 3445421 11 122 12223333334443322 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 69999999985
No 240
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.07 E-value=0.13 Score=43.88 Aligned_cols=104 Identities=17% Similarity=0.277 Sum_probs=59.9
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHcCCCeEEEecCCh---hHHH-HHHHcCCCEe--eccC-CCCcchhHHHHHhhhh
Q 020928 136 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDV---QRLS-IARNLGADET--AKVS-TDIEDVDTDVGKIQNA 205 (319)
Q Consensus 136 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~---~~~~-~~~~~g~~~v--~~~~-~~~~~~~~~i~~~~~~ 205 (319)
.+++++|.|+ +++|.++++.+...|+ +|+.+.++. ++.+ ..+++....+ +..+ .+.++....+.++.+.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 4678999985 5999999888878898 566665432 2333 3333321111 1112 2223333444444433
Q ss_pred cCCCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEecc
Q 020928 206 MGSGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 206 ~~~~~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
. +++|+++++.|.. + ..+.+++.+.++|+++.++.
T Consensus 85 ~-g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS 148 (257)
T PRK08594 85 V-GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTY 148 (257)
T ss_pred C-CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcc
Confidence 2 4799999987631 0 12344556677899998874
No 241
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.06 E-value=0.061 Score=45.60 Aligned_cols=81 Identities=19% Similarity=0.197 Sum_probs=47.8
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEe-cCChhHHHHHHHcCCCEeeccC-CCCcchhHHHHHhhhhcCCCccE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
.+.+++|+| +|.+|..+++.+...|+ .|+.+ .++++..+.+++.+.. .+..+ .+.++....+.++.+. -+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~-~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVF-TIKCDVGNRDQVKKSKEVVEKE-FGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCe-EEEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 357899998 59999999998888898 45554 3344444444433322 22111 2222333334443332 246999
Q ss_pred EEEccCC
Q 020928 213 SFDCVGF 219 (319)
Q Consensus 213 v~d~~g~ 219 (319)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9999875
No 242
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.06 E-value=0.061 Score=45.85 Aligned_cols=81 Identities=20% Similarity=0.240 Sum_probs=50.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc-CCCE-eeccC-CCCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~-g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~~~d 211 (319)
++++++|.| +|.+|..+++.+...|. +|+.+++++++.+.+++. +... .+..+ ...++....+.++.+.. +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAF-GKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHh-CCCC
Confidence 467899998 59999999998888898 678888877665555442 3211 11111 11122333344433322 4689
Q ss_pred EEEEccC
Q 020928 212 VSFDCVG 218 (319)
Q Consensus 212 ~v~d~~g 218 (319)
++|++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999886
No 243
>PRK08317 hypothetical protein; Provisional
Probab=96.05 E-value=0.099 Score=43.68 Aligned_cols=104 Identities=21% Similarity=0.303 Sum_probs=67.8
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC-CCeEEEecCChhHHHHHHHc--CCCEeeccCCCCcchhHHHHHhhhh
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL--GADETAKVSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~~--g~~~v~~~~~~~~~~~~~i~~~~~~ 205 (319)
++..+++++++||.+|+|. |..+..+++..+ ...+++++.+++..+.+++. .....+.+... +. ..+. .
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~--d~----~~~~-~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG--DA----DGLP-F 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec--cc----ccCC-C
Confidence 4557889999999999877 888889998873 33799999999888877764 11111111110 11 0000 0
Q ss_pred cCCCccEEEEcc-----CC-hHHHHHHHHhhcCCCEEEEec
Q 020928 206 MGSGIDVSFDCV-----GF-DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 206 ~~~~~d~v~d~~-----g~-~~~~~~~~~~l~~~G~~v~~g 240 (319)
....+|+|+-.. .. ...+..+.+.|+++|+++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 134688887532 22 246788899999999998664
No 244
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.062 Score=45.48 Aligned_cols=81 Identities=25% Similarity=0.286 Sum_probs=49.7
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCC-EeeccCC-CCcchhHHHHHhhhhcCCC
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVST-DIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~~ 209 (319)
+++++|.| +|.+|..+++.+...|. .|+++++++++.+.+.+ .+.. ..+..+- +.++....+.++.+.. +.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CC
Confidence 46889998 59999999998888998 78888877765543322 2211 1222222 2223333333333322 46
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|+++++.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999999874
No 245
>PLN02244 tocopherol O-methyltransferase
Probab=96.03 E-value=0.15 Score=45.50 Aligned_cols=97 Identities=16% Similarity=0.239 Sum_probs=62.9
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc----CCCEeeccCCCCcchhHHHHHhhhhcCCCc
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~ 210 (319)
+++++||=+|+|. |..+..+++..|+ .|++++.++...+.+++. +...-+.+.. .|. ..+. ...+.|
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~--~D~----~~~~-~~~~~F 187 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQV--ADA----LNQP-FEDGQF 187 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--cCc----ccCC-CCCCCc
Confidence 7888999899876 7778888888887 799999998876665542 3211111100 011 0010 013569
Q ss_pred cEEEEccCC------hHHHHHHHHhhcCCCEEEEec
Q 020928 211 DVSFDCVGF------DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 211 d~v~d~~g~------~~~~~~~~~~l~~~G~~v~~g 240 (319)
|+|+..... ...++.+.+.|+++|+++...
T Consensus 188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 188 DLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred cEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 999864332 236778899999999998765
No 246
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.03 E-value=0.16 Score=39.79 Aligned_cols=88 Identities=11% Similarity=0.052 Sum_probs=50.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.|.+|+|+|+|.+|.--++.+...|+ .|.+++ ++..+.+++++.-.... .. +.+..-.++|+||-
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~~~-----~~-------~~~~dl~~a~lVia 76 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITWKQ-----KT-------FSNDDIKDAHLIYA 76 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEEEe-----cc-------cChhcCCCceEEEE
Confidence 46889999999999998888888898 555553 33333334443211110 01 11112246899999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEEe
Q 020928 216 CVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 216 ~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
+.+.++.-..+....+..+ ++..
T Consensus 77 aT~d~e~N~~i~~~a~~~~-~vn~ 99 (157)
T PRK06719 77 ATNQHAVNMMVKQAAHDFQ-WVNV 99 (157)
T ss_pred CCCCHHHHHHHHHHHHHCC-cEEE
Confidence 9998744333333333433 4443
No 247
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.02 E-value=0.092 Score=44.22 Aligned_cols=82 Identities=17% Similarity=0.187 Sum_probs=49.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChh--HHHHHHHcCCC-EeeccCC-CCcchhHHHHHhhhhcCCCc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGAD-ETAKVST-DIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~~g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~~~ 210 (319)
.++++||.| +|.+|..++..+...|+ .|+.+++++. ..+.+++.+.. ..+..+- +.++....+.++.+. .+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCCC
Confidence 468999998 59999999998888898 6777776542 22333444422 2222222 222333333333332 2469
Q ss_pred cEEEEccCC
Q 020928 211 DVSFDCVGF 219 (319)
Q Consensus 211 d~v~d~~g~ 219 (319)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999875
No 248
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=96.02 E-value=0.16 Score=40.92 Aligned_cols=99 Identities=16% Similarity=0.296 Sum_probs=63.8
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhh
Q 020928 130 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 130 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~ 205 (319)
....+.++.+||=+|+|. |..++.+++.....++++++.+++..+.+++ ++...+..... +... .
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~---~---- 93 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI---E---- 93 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh---h----
Confidence 445677889999898776 7777777877543479999999987776654 33322211111 1110 1
Q ss_pred cCCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEe
Q 020928 206 MGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 206 ~~~~~d~v~d~~g~---~~~~~~~~~~l~~~G~~v~~ 239 (319)
....+|+|+..... ...+..+.+.|+++|+++..
T Consensus 94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 12468999854321 23567788999999998764
No 249
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.21 Score=42.80 Aligned_cols=78 Identities=28% Similarity=0.440 Sum_probs=46.6
Q ss_pred eEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCCEe----eccCCCCcchhHHHHHhhhhcCCC
Q 020928 139 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET----AKVSTDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 139 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v----~~~~~~~~~~~~~i~~~~~~~~~~ 209 (319)
+++|+| +|++|..+++.+...|+ .|+.+++++++.+.+ +..+...+ .|+ .+.++....+.++.+. .++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDI-SDYDAVAAFAADIHAA-HGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeC-CCHHHHHHHHHHHHHh-cCC
Confidence 688998 59999999998888898 577777766554322 22333221 222 1122222223333322 346
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|++|++.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 250
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.075 Score=45.24 Aligned_cols=84 Identities=24% Similarity=0.324 Sum_probs=51.3
Q ss_pred CCCCCeEEEECC-C-HHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-----cCCCEee--ccCC-CCcchhHHHHHhh
Q 020928 134 VGPETNVMIMGS-G-PIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-----LGADETA--KVST-DIEDVDTDVGKIQ 203 (319)
Q Consensus 134 ~~~~~~vlI~G~-g-~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----~g~~~v~--~~~~-~~~~~~~~i~~~~ 203 (319)
+.++++++|+|+ | ++|.++++.+...|+ .|+++++++++.+...+ ++...+. ..+- +.++....+.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 445789999984 5 799999999989998 57777777665443322 3432222 1111 1122333333333
Q ss_pred hhcCCCccEEEEccCC
Q 020928 204 NAMGSGIDVSFDCVGF 219 (319)
Q Consensus 204 ~~~~~~~d~v~d~~g~ 219 (319)
+. .+.+|++|++.|.
T Consensus 93 ~~-~g~id~li~~ag~ 107 (262)
T PRK07831 93 ER-LGRLDVLVNNAGL 107 (262)
T ss_pred HH-cCCCCEEEECCCC
Confidence 32 2479999999984
No 251
>PRK09186 flagellin modification protein A; Provisional
Probab=96.01 E-value=0.23 Score=42.01 Aligned_cols=81 Identities=23% Similarity=0.357 Sum_probs=49.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc----CCCE--eeccC-CCCcchhHHHHHhhhhc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADE--TAKVS-TDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~----g~~~--v~~~~-~~~~~~~~~i~~~~~~~ 206 (319)
++.++||.| +|.+|..++..+...|+ .|+.+.+++++.+.+ +++ +... .+..+ .+.+++...+.++.+..
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 467899998 59999999998888898 677777776654432 222 2211 11111 12223333344433322
Q ss_pred CCCccEEEEccC
Q 020928 207 GSGIDVSFDCVG 218 (319)
Q Consensus 207 ~~~~d~v~d~~g 218 (319)
+++|+++.+.+
T Consensus 82 -~~id~vi~~A~ 92 (256)
T PRK09186 82 -GKIDGAVNCAY 92 (256)
T ss_pred -CCccEEEECCc
Confidence 46899999885
No 252
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.00 E-value=0.078 Score=38.23 Aligned_cols=89 Identities=13% Similarity=0.231 Sum_probs=57.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.+.+|||+|+|.+|..-++.+...|+ .|.+++... +..+ +.-.... ..+.+ .-.++++||-
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~--------~l~~~~lV~~ 66 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEE--------DLDGADLVFA 66 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GG--------GCTTESEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHH--------HHhhheEEEe
Confidence 47899999999999999999999998 677776654 2222 2111111 12211 1246999999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEEecccC
Q 020928 216 CVGFDKTMSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 216 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 243 (319)
+.+.++.-+.+.+..+..|.++.+...+
T Consensus 67 at~d~~~n~~i~~~a~~~~i~vn~~D~p 94 (103)
T PF13241_consen 67 ATDDPELNEAIYADARARGILVNVVDDP 94 (103)
T ss_dssp -SS-HHHHHHHHHHHHHTTSEEEETT-C
T ss_pred cCCCHHHHHHHHHHHhhCCEEEEECCCc
Confidence 9998877777777778788888776533
No 253
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.99 E-value=0.19 Score=41.98 Aligned_cols=99 Identities=18% Similarity=0.209 Sum_probs=61.8
Q ss_pred HHHhcC-CCCCCeEEEECCCHHHHHHHHHHHHcCCC--eEEEecCC----hhH--------HHHHHHcCCCEeeccCCCC
Q 020928 128 ACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAP--RIIITDVD----VQR--------LSIARNLGADETAKVSTDI 192 (319)
Q Consensus 128 ~l~~~~-~~~~~~vlI~G~g~vG~~ai~la~~~g~~--~vv~v~~~----~~~--------~~~~~~~g~~~v~~~~~~~ 192 (319)
+++... --.+.+++|+|+|+.|..++..+...|++ ++..++++ +++ .+++++++... . .
T Consensus 15 al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~ 88 (226)
T cd05311 15 ALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----G 88 (226)
T ss_pred HHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----c
Confidence 344433 24567999999999999999988889998 89999887 333 33444443211 0 0
Q ss_pred cchhHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 193 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 193 ~~~~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
.++.+. + .++|++|++++..-.....++.|.+...++.+.
T Consensus 89 ~~l~~~---l-----~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 89 GTLKEA---L-----KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred CCHHHH---H-----hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 111111 2 248999999973312246667777776655544
No 254
>PRK06128 oxidoreductase; Provisional
Probab=95.98 E-value=0.19 Score=43.87 Aligned_cols=104 Identities=18% Similarity=0.204 Sum_probs=59.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChh--H----HHHHHHcCCCEe-eccCC-CCcchhHHHHHhhhhc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--R----LSIARNLGADET-AKVST-DIEDVDTDVGKIQNAM 206 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~----~~~~~~~g~~~v-~~~~~-~~~~~~~~i~~~~~~~ 206 (319)
.++++||.| +|.+|..++..+...|+ .|+.+.++.+ . .+.+++.+.... +..+- +.++....+.++.+.
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE- 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH-
Confidence 467899998 69999999998888898 5555544321 1 222333343221 11111 122223333333332
Q ss_pred CCCccEEEEccCCh--------------------------HHHHHHHHhhcCCCEEEEecc
Q 020928 207 GSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 207 ~~~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~ 241 (319)
-+++|++|.+.|.. ...+.+.+.+..+|+++.++.
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS 192 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS 192 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence 24799999998841 023344555667889988764
No 255
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.079 Score=44.24 Aligned_cols=82 Identities=16% Similarity=0.185 Sum_probs=50.8
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCCE-eeccC-CCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~ 208 (319)
++.+++|.| ++++|.+....+...|+ .|+.+.+++++.+.+ ++.+... .+..+ .+.++....+.++.+..+.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 467899998 58999998888888899 677777777665433 2334321 11111 2223333344444443343
Q ss_pred CccEEEEccC
Q 020928 209 GIDVSFDCVG 218 (319)
Q Consensus 209 ~~d~v~d~~g 218 (319)
.+|++|++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 7999999986
No 256
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.081 Score=45.54 Aligned_cols=82 Identities=22% Similarity=0.206 Sum_probs=51.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCC--EeeccCCC-CcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--ETAKVSTD-IEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~--~v~~~~~~-~~~~~~~i~~~~~~~~~~~d 211 (319)
.+.++||+| +|.+|..+++.+...|. +|+++++++++.+.+.+.... ..+..+-. .+.....+..+.+. -+.+|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT-FGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence 356899998 59999999998888898 688888888776655543221 11211211 12222233333222 24689
Q ss_pred EEEEccCC
Q 020928 212 VSFDCVGF 219 (319)
Q Consensus 212 ~v~d~~g~ 219 (319)
+++++.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999886
No 257
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.96 E-value=0.039 Score=47.73 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=50.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-HcCCCE-eeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~-v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
.+.+++|+|+|+.+.+++..+..+|++.+.++.++.++.+.+. .++... +..+. ..+.+.. .-..+|+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~----~~~~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLA----IEKAAEVL 194 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhh----cccCCCEE
Confidence 5789999999999999999999999988999999887766543 343211 11110 0011111 11468999
Q ss_pred EEccCCh
Q 020928 214 FDCVGFD 220 (319)
Q Consensus 214 ~d~~g~~ 220 (319)
|+|++..
T Consensus 195 InaTp~g 201 (282)
T TIGR01809 195 VSTVPAD 201 (282)
T ss_pred EECCCCC
Confidence 9998753
No 258
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.96 E-value=0.23 Score=40.66 Aligned_cols=91 Identities=10% Similarity=0.182 Sum_probs=52.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChh-H-HHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ-R-LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~-~-~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
.+.+|||+|+|.+|...+..+...|+ .|.+++.... . .+++.+ +. + .+... .+ ....-.++|+|
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~--i-~~~~~--~~-------~~~~l~~adlV 74 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK--I-RWKQK--EF-------EPSDIVDAFLV 74 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC--E-EEEec--CC-------ChhhcCCceEE
Confidence 46799999999999999888888897 5666654321 1 222222 21 1 11111 11 01112468999
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEecc
Q 020928 214 FDCVGFDKTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 214 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~ 241 (319)
|-+.+.++.-..+.... ..+.++.+..
T Consensus 75 iaaT~d~elN~~i~~~a-~~~~lvn~~d 101 (202)
T PRK06718 75 IAATNDPRVNEQVKEDL-PENALFNVIT 101 (202)
T ss_pred EEcCCCHHHHHHHHHHH-HhCCcEEECC
Confidence 99999885444444443 4455655543
No 259
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.95 E-value=0.053 Score=46.32 Aligned_cols=81 Identities=22% Similarity=0.411 Sum_probs=51.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChh-HHHHH---HHcCCC--EeeccCCCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIA---RNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~~~---~~~g~~--~v~~~~~~~~~~~~~i~~~~~~~~~ 208 (319)
.|+.|||+| ++++|.+.++-...+|+ +++..|.+++ ..+.+ ++.|-. ..-|. ++.++......++.++.|
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e~G- 113 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKEVG- 113 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHhcC-
Confidence 688999998 58999877776666787 5666665443 33333 434411 12222 344555555566665554
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|++++++|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 89999999986
No 260
>PLN03139 formate dehydrogenase; Provisional
Probab=95.95 E-value=0.13 Score=46.46 Aligned_cols=92 Identities=16% Similarity=0.200 Sum_probs=62.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|+... .+ +.++. ...|+|+-
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~----l~ell----~~sDvV~l 261 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------ED----LDAML----PKCDVVVI 261 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CC----HHHHH----hhCCEEEE
Confidence 56799999999999999999999999 68888876544444444553221 01 22232 24788877
Q ss_pred ccCChHHH-----HHHHHhhcCCCEEEEecccC
Q 020928 216 CVGFDKTM-----STALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 216 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 243 (319)
+....... ...+..|+++..++.++...
T Consensus 262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 294 (386)
T PLN03139 262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNARGA 294 (386)
T ss_pred eCCCCHHHHHHhCHHHHhhCCCCeEEEECCCCc
Confidence 77643222 34677889999888887543
No 261
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.076 Score=44.95 Aligned_cols=82 Identities=21% Similarity=0.323 Sum_probs=50.5
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-c---CCCE-eeccC-CCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~---g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~ 208 (319)
.++++||+| +|++|..+++.+...|+ +|+.+++++++.+.+.+ + +... .+..+ .+.++....+.++.+.. +
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL-G 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 468899998 59999999998888898 67777777765543322 2 2211 11111 12223333334433322 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|+++.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 262
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.086 Score=44.61 Aligned_cols=82 Identities=21% Similarity=0.245 Sum_probs=51.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCE--eeccCC-CCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE--TAKVST-DIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~--v~~~~~-~~~~~~~~i~~~~~~~~~~~d 211 (319)
++.++||+| +|.+|..+++.+...|+ .|+.++++++..+...++.... .+..+- +.++....+.++.+. ..++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 467899998 59999999988888898 6888888776655555543222 222222 122223333333332 24689
Q ss_pred EEEEccCC
Q 020928 212 VSFDCVGF 219 (319)
Q Consensus 212 ~v~d~~g~ 219 (319)
.++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999985
No 263
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.91 E-value=0.14 Score=43.73 Aligned_cols=104 Identities=16% Similarity=0.249 Sum_probs=66.5
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHHHcC-------CCEeeccCCCCcchhHHHHHh
Q 020928 131 RANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLG-------ADETAKVSTDIEDVDTDVGKI 202 (319)
Q Consensus 131 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~~g-------~~~v~~~~~~~~~~~~~i~~~ 202 (319)
...++++++||-.|+|. |..+..+++..+. ..|+++|.+++-.+.+++.. ...+..... + ...+
T Consensus 68 ~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~---d----~~~l 139 (261)
T PLN02233 68 WSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEG---D----ATDL 139 (261)
T ss_pred HhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEc---c----cccC
Confidence 35778899999998776 6677788887653 27999999999888776421 111100001 1 1111
Q ss_pred hhhcCCCccEEEEccCC------hHHHHHHHHhhcCCCEEEEecccC
Q 020928 203 QNAMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 203 ~~~~~~~~d~v~d~~g~------~~~~~~~~~~l~~~G~~v~~g~~~ 243 (319)
. ..++.+|.|+-..+- ...++++.+.|+|+|+++.+....
T Consensus 140 p-~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~ 185 (261)
T PLN02233 140 P-FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK 185 (261)
T ss_pred C-CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence 1 013468988754321 246788999999999998876543
No 264
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.89 E-value=0.081 Score=43.83 Aligned_cols=95 Identities=21% Similarity=0.284 Sum_probs=64.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEe--eccCCCCcchhHHHHHhhhhcCCCccE
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
-+|.+||=+|+|+ |+++.-+|+. |+ .|.++|-+++..+.++......- ++|.. ..+.++.. .+..||+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr~-Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~------~~~edl~~-~~~~FDv 127 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLARL-GA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ------ATVEDLAS-AGGQFDV 127 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHHC-CC-eeEEecCChHHHHHHHHhhhhccccccchh------hhHHHHHh-cCCCccE
Confidence 4788899899877 7888888874 77 89999999999888875322111 33432 12333433 2368999
Q ss_pred EEE-----ccCCh-HHHHHHHHhhcCCCEEEEe
Q 020928 213 SFD-----CVGFD-KTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 213 v~d-----~~g~~-~~~~~~~~~l~~~G~~v~~ 239 (319)
|+. -+..+ ..+..+.+.++|+|.++.-
T Consensus 128 V~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 128 VTCMEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred EEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 963 33333 3567799999999987754
No 265
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.067 Score=45.49 Aligned_cols=85 Identities=20% Similarity=0.245 Sum_probs=52.1
Q ss_pred CCCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCCC--EeeccCCC-CcchhHHHHHhhhhcCC
Q 020928 134 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD--ETAKVSTD-IEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 134 ~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~--~v~~~~~~-~~~~~~~i~~~~~~~~~ 208 (319)
.-++.++||+| +|.+|..++..+...|. .|+.++++++..+.+.+ .... ..+..+-. .++....+.++.+.. .
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 85 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERF-G 85 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 35678999998 59999999998888898 58888777665554433 2211 12221211 122222333333222 4
Q ss_pred CccEEEEccCCh
Q 020928 209 GIDVSFDCVGFD 220 (319)
Q Consensus 209 ~~d~v~d~~g~~ 220 (319)
++|.||.+.|..
T Consensus 86 ~~d~vi~~ag~~ 97 (264)
T PRK12829 86 GLDVLVNNAGIA 97 (264)
T ss_pred CCCEEEECCCCC
Confidence 799999988753
No 266
>PRK06398 aldose dehydrogenase; Validated
Probab=95.86 E-value=0.15 Score=43.43 Aligned_cols=76 Identities=18% Similarity=0.267 Sum_probs=47.0
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccC-CCCcchhHHHHHhhhhcCCCccEE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
.++++||+| ++.+|..++..+...|+ .|+.+++++.+.. .. ..+..+ .+.++....+.++.+. .+.+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~-~~~~~D~~~~~~i~~~~~~~~~~-~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DV-DYFKVDVSNKEQVIKGIDYVISK-YGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ce-EEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 367899998 59999999998888998 6777776654321 11 111111 2222333344444332 2469999
Q ss_pred EEccCC
Q 020928 214 FDCVGF 219 (319)
Q Consensus 214 ~d~~g~ 219 (319)
|++.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998874
No 267
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.86 E-value=0.38 Score=35.20 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=60.3
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCC
Q 020928 140 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 219 (319)
Q Consensus 140 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~ 219 (319)
++|+|.|.+|..+++.++..+. .|++++.++++.+.+++.|.. ++.-+..+.+ .+++. .-..++.++-+.+.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~---~l~~a---~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATDPE---VLERA---GIEKADAVVILTDD 72 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTSHH---HHHHT---TGGCESEEEEESSS
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchhhh---HHhhc---CccccCEEEEccCC
Confidence 5788999999999999998664 799999999999999988844 3332332222 22222 23568888888876
Q ss_pred hHH---HHHHHHhhcCCCEEEEe
Q 020928 220 DKT---MSTALNATRPGGKVCLI 239 (319)
Q Consensus 220 ~~~---~~~~~~~l~~~G~~v~~ 239 (319)
+.. .....+.+.+..+++..
T Consensus 73 d~~n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 73 DEENLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEE
Confidence 532 22334445566666643
No 268
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.84 E-value=0.069 Score=44.29 Aligned_cols=105 Identities=12% Similarity=0.112 Sum_probs=62.8
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCCCEee-------ccCCCCcc-hhHHHHHh
Q 020928 132 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETA-------KVSTDIED-VDTDVGKI 202 (319)
Q Consensus 132 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v~-------~~~~~~~~-~~~~i~~~ 202 (319)
....++.+||+.|+|. |.-++.||. .|. .|++++.++...+.+ ++.+..... .+....-+ +...+-.+
T Consensus 33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l 109 (218)
T PRK13255 33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL 109 (218)
T ss_pred hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence 3456778999999887 888888886 698 799999999877754 333322100 00000000 00111111
Q ss_pred hhhcCCCccEEEEccCC--------hHHHHHHHHhhcCCCEEEEe
Q 020928 203 QNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 203 ~~~~~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~ 239 (319)
.......+|.|+|...- ...++.+.++|+++|++..+
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 11112468999986531 23578888999999975543
No 269
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.83 E-value=0.22 Score=42.12 Aligned_cols=82 Identities=22% Similarity=0.381 Sum_probs=49.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc---CCCE-eeccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
.+.++||+| +|.+|..+++.+...|. .|+.+++++++.+.+ .++ +... .+..+- +.++....+..+.+. ..
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET-FG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 357899998 69999999998888898 677777777654433 222 3221 122121 222333333333332 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|++|.+.+.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 69999998874
No 270
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.83 E-value=0.09 Score=42.24 Aligned_cols=94 Identities=19% Similarity=0.238 Sum_probs=58.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH----HcCCCEeeccCCCCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d 211 (319)
++++||-+|+|. |..++.+++.....+|++++.+++..+.++ +.+...+..... +. .++. ....+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~---d~----~~~~--~~~~fD 111 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG---RA----EDFQ--HEEQFD 111 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec---ch----hhcc--ccCCcc
Confidence 378888888766 667777776654447999999987665554 344432211111 21 1111 135799
Q ss_pred EEEEccC-C-hHHHHHHHHhhcCCCEEEEe
Q 020928 212 VSFDCVG-F-DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 212 ~v~d~~g-~-~~~~~~~~~~l~~~G~~v~~ 239 (319)
+|+-..- . +..++.+.+.|+++|+++..
T Consensus 112 ~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 112 VITSRALASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred EEEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence 9876431 1 24566778899999998865
No 271
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.81 E-value=0.2 Score=42.55 Aligned_cols=97 Identities=24% Similarity=0.306 Sum_probs=67.3
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHc-CCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcC
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~ 207 (319)
+.....+++++||=+|+|. |..+..+++.. +. .|++++.++...+.+++.+.+... .+. ..+. ..
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~----~~~~--~~ 87 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDV----RDWK--PK 87 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cCh----hhCC--CC
Confidence 4556678889999999877 77888888875 44 799999999988888775533211 121 1121 13
Q ss_pred CCccEEEEccC-----C-hHHHHHHHHhhcCCCEEEEe
Q 020928 208 SGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 208 ~~~d~v~d~~g-----~-~~~~~~~~~~l~~~G~~v~~ 239 (319)
..+|+|+.... . ...+..+.+.|+|+|+++..
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 47999986443 1 23567888899999998764
No 272
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.088 Score=44.87 Aligned_cols=82 Identities=26% Similarity=0.333 Sum_probs=50.1
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-c----CCCEe--eccC-CCCcchhHHHHHhhhhc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L----GADET--AKVS-TDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~~v--~~~~-~~~~~~~~~i~~~~~~~ 206 (319)
.+++++|.| ++.+|..+++.+...|+ +|+.+++++++.+.+.+ + +...+ +..+ .+.++....+.++.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 467899998 59999999998888899 67778787765443321 1 11122 1111 12223333333333322
Q ss_pred CCCccEEEEccCC
Q 020928 207 GSGIDVSFDCVGF 219 (319)
Q Consensus 207 ~~~~d~v~d~~g~ 219 (319)
+.+|+++++.|.
T Consensus 86 -g~id~li~~Ag~ 97 (265)
T PRK07062 86 -GGVDMLVNNAGQ 97 (265)
T ss_pred -CCCCEEEECCCC
Confidence 469999999984
No 273
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.80 E-value=0.093 Score=44.73 Aligned_cols=82 Identities=15% Similarity=0.212 Sum_probs=47.6
Q ss_pred CCCeEEEECC-C--HHHHHHHHHHHHcCCCeEEEecCChhHHHHHH----HcCCCEeeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G~-g--~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
.+++++|.|+ + ++|.++.+.+...|+ +|+...+++...+.++ +.+....+..+ .+.++....+.++.+..
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~- 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW- 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc-
Confidence 4678899985 4 799998887777898 5666666543222232 23432222222 22233334444444333
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+.+|+++++.|.
T Consensus 85 g~iDilVnnag~ 96 (260)
T PRK06603 85 GSFDFLLHGMAF 96 (260)
T ss_pred CCccEEEEcccc
Confidence 469999998873
No 274
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.79 E-value=0.14 Score=44.07 Aligned_cols=88 Identities=26% Similarity=0.312 Sum_probs=55.0
Q ss_pred eEEEECCCHHHHHH-HHHHHHcCCCeEEEecCChhH--HHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 139 NVMIMGSGPIGLVT-LLAARAFGAPRIIITDVDVQR--LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 139 ~vlI~G~g~vG~~a-i~la~~~g~~~vv~v~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
++.|+|+|.+|... ..+.+..++..+.+++.++++ .++.+++|...... + +..+.. ..++|+||+
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~------~----~e~ll~--~~dIDaV~i 70 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE------G----VDGLLA--NPDIDIVFD 70 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC------C----HHHHhc--CCCCCEEEE
Confidence 68899999999754 566665667444445555543 45677777543221 1 112221 247999999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEE
Q 020928 216 CVGFDKTMSTALNATRPGGKVCL 238 (319)
Q Consensus 216 ~~g~~~~~~~~~~~l~~~G~~v~ 238 (319)
+.+...+.+....++..+-.++.
T Consensus 71 aTp~~~H~e~a~~al~aGk~VId 93 (285)
T TIGR03215 71 ATSAKAHARHARLLAELGKIVID 93 (285)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEE
Confidence 99988666666666666555543
No 275
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.074 Score=45.11 Aligned_cols=82 Identities=21% Similarity=0.178 Sum_probs=49.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc---CCC-EeeccCC-CCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GAD-ETAKVST-DIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~---g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~~ 209 (319)
++.++||+| +|.+|..+++.+...|+ .++.+++++++.+..+++ +.. ..+..+- +.++....+.++.+. .++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence 357899998 59999999888778898 566676766665444432 322 1122221 122233333333332 247
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999984
No 276
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.78 E-value=0.1 Score=44.58 Aligned_cols=82 Identities=18% Similarity=0.255 Sum_probs=47.8
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCEeeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
+++++||.|+ +++|.+..+.+...|+ .|+.+.+.+...+.+++ .+....+..+ .+.++....+.++.+. .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH-W 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH-h
Confidence 4678999983 5899999988888999 56655444433333333 2322222222 2223333344444432 2
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999999874
No 277
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.11 Score=43.66 Aligned_cols=82 Identities=26% Similarity=0.303 Sum_probs=50.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHH-HHHcCCCEe-eccCC-CCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADET-AKVST-DIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~v-~~~~~-~~~~~~~~i~~~~~~~~~~~d 211 (319)
++.+++|.| +|.+|..+++.+...|+ .|+.+++++++.+. .++++.... +..+- +..+....+..+.+. .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 467899998 59999999998888998 67778777665443 344553321 11111 112222222333322 34699
Q ss_pred EEEEccCC
Q 020928 212 VSFDCVGF 219 (319)
Q Consensus 212 ~v~d~~g~ 219 (319)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99999874
No 278
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.77 E-value=0.19 Score=41.39 Aligned_cols=104 Identities=23% Similarity=0.342 Sum_probs=69.8
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcC-CCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhhc
Q 020928 132 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 132 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~~ 206 (319)
++....+++|-+|++. |..++.+|..+. -.++++++.++++.+.+++ .|.+..+..--. .+..+.+.+ ..
T Consensus 55 ~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~~ 129 (219)
T COG4122 55 ARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---LL 129 (219)
T ss_pred HHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---cc
Confidence 5567889999998654 788888888776 3379999999998777765 565553221111 243333333 23
Q ss_pred CCCccEEE-EccCC--hHHHHHHHHhhcCCCEEEEec
Q 020928 207 GSGIDVSF-DCVGF--DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 207 ~~~~d~v~-d~~g~--~~~~~~~~~~l~~~G~~v~~g 240 (319)
...||.|| |+.=. +..++.+++.|+++|-++.=.
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN 166 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN 166 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence 46799986 43322 357889999999999887543
No 279
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.75 E-value=0.21 Score=42.78 Aligned_cols=105 Identities=16% Similarity=0.229 Sum_probs=67.6
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCC-EeeccCCCCcchhHHHHHhhhhc
Q 020928 128 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 128 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~i~~~~~~~ 206 (319)
.+...+++++.+||=+|+|. |..+..+++..+. .|++++.+++..+.+++.... ..+.... .+.. ... ..
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~----~~~-~~ 114 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDIL----KKD-FP 114 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCcc----cCC-CC
Confidence 45667889999999998765 6667777777777 799999999888877763221 1111100 1110 000 01
Q ss_pred CCCccEEEEc--c---C--C-hHHHHHHHHhhcCCCEEEEecc
Q 020928 207 GSGIDVSFDC--V---G--F-DKTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 207 ~~~~d~v~d~--~---g--~-~~~~~~~~~~l~~~G~~v~~g~ 241 (319)
...+|+|+.. + + . ...++.+.+.|+|+|+++....
T Consensus 115 ~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 115 ENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred CCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 3469998852 1 1 1 2356788899999999987653
No 280
>PLN03075 nicotianamine synthase; Provisional
Probab=95.75 E-value=0.14 Score=44.33 Aligned_cols=99 Identities=24% Similarity=0.271 Sum_probs=65.4
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcC-CCeEEEecCChhHHHHHHHcC-C----CEeeccCCCCcchhHHHHHhhhhcCC
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLG-A----DETAKVSTDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~~g-~----~~v~~~~~~~~~~~~~i~~~~~~~~~ 208 (319)
.++++|+-+|+|+.++.++.+++... -.+++.+|.+++..+.+++.- . ..-+.+.. .+.. +... ...
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~----~~~~-~l~ 194 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVM----DVTE-SLK 194 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchh----hccc-ccC
Confidence 47899999999998998888886543 337999999999888887743 1 11111111 1111 1110 125
Q ss_pred CccEEEEcc------CC-hHHHHHHHHhhcCCCEEEEec
Q 020928 209 GIDVSFDCV------GF-DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 209 ~~d~v~d~~------g~-~~~~~~~~~~l~~~G~~v~~g 240 (319)
+||+||-.+ .. ...+..+.+.|+++|.++.=.
T Consensus 195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 799998764 12 246788999999999887643
No 281
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.75 E-value=0.059 Score=42.29 Aligned_cols=81 Identities=20% Similarity=0.257 Sum_probs=49.2
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC--hhHHH-HH---HHcCCCEeecc--C-CCCcchhHHHHHhhhhcC
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD--VQRLS-IA---RNLGADETAKV--S-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~--~~~~~-~~---~~~g~~~v~~~--~-~~~~~~~~~i~~~~~~~~ 207 (319)
++++|+| ++++|..+++.+-..|..+|+.+.++ .++.+ +. +..+ ..+..+ + ...++....+..+.+ ..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVIK-RF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHHH-HH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-ccccccccccccccccccccccccc-cc
Confidence 3688998 69999988887777777678888887 33333 32 3334 322222 2 222333334444432 24
Q ss_pred CCccEEEEccCCh
Q 020928 208 SGIDVSFDCVGFD 220 (319)
Q Consensus 208 ~~~d~v~d~~g~~ 220 (319)
..+|++|.+.|..
T Consensus 79 ~~ld~li~~ag~~ 91 (167)
T PF00106_consen 79 GPLDILINNAGIF 91 (167)
T ss_dssp SSESEEEEECSCT
T ss_pred ccccccccccccc
Confidence 5799999998874
No 282
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.73 E-value=0.29 Score=41.66 Aligned_cols=99 Identities=23% Similarity=0.290 Sum_probs=66.8
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCC-EeeccCCCCcchhHHHHHhhhhcC
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~i~~~~~~~~ 207 (319)
+....++++++||=+|+|. |..+..+++..+...|++++.++...+.+++.... ..+. .+. ..+. ..
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~----~~~~--~~ 91 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADI----ASWQ--PP 91 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cch----hccC--CC
Confidence 3446678889999999876 77788888876544899999999888887764221 1111 111 1111 13
Q ss_pred CCccEEEEccCC------hHHHHHHHHhhcCCCEEEEe
Q 020928 208 SGIDVSFDCVGF------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 208 ~~~d~v~d~~g~------~~~~~~~~~~l~~~G~~v~~ 239 (319)
..+|+|+....- ...++.+.+.|+++|.++..
T Consensus 92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 478998754432 24678888999999998775
No 283
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.092 Score=44.00 Aligned_cols=83 Identities=19% Similarity=0.329 Sum_probs=50.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-H---cCCCE--e--eccCC-CCcchhHHHHHhhhh
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-N---LGADE--T--AKVST-DIEDVDTDVGKIQNA 205 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~---~g~~~--v--~~~~~-~~~~~~~~i~~~~~~ 205 (319)
++.+++|.| +|.+|..+++.+...|. .|+++++++++.+.+. + .+... . .+... ...++.....++.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 357899998 59999999998888898 6888888776654332 2 12111 1 12211 112333333344433
Q ss_pred cCCCccEEEEccCC
Q 020928 206 MGSGIDVSFDCVGF 219 (319)
Q Consensus 206 ~~~~~d~v~d~~g~ 219 (319)
.+..+|.+|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33478999999984
No 284
>PRK06196 oxidoreductase; Provisional
Probab=95.71 E-value=0.093 Score=46.16 Aligned_cols=82 Identities=21% Similarity=0.286 Sum_probs=49.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCCCEeeccCC-CCcchhHHHHHhhhhcCCCccE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVST-DIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
.+.+++|+| +|.+|..++..+...|+ .|+.+++++++.+.+ .++.....+..+- +.++....+.++.+ ..+++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~-~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD-SGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh-cCCCCCE
Confidence 467899998 59999999988888898 677777776654433 3332112222221 12222223333332 2357999
Q ss_pred EEEccCC
Q 020928 213 SFDCVGF 219 (319)
Q Consensus 213 v~d~~g~ 219 (319)
+|++.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9999874
No 285
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.70 E-value=0.078 Score=43.15 Aligned_cols=95 Identities=19% Similarity=0.276 Sum_probs=58.8
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc----CCCEeeccCCCCcchhHHHHHhhhhcC
Q 020928 132 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 132 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~i~~~~~~~~ 207 (319)
....++.+||-+|+|. |..++.+++. |. .|+++|.++...+.+++. +.. + . ....+. .... ..
T Consensus 26 ~~~~~~~~vLDiGcG~-G~~a~~la~~-g~-~V~~iD~s~~~l~~a~~~~~~~~~~-v-~--~~~~d~----~~~~--~~ 92 (195)
T TIGR00477 26 VKTVAPCKTLDLGCGQ-GRNSLYLSLA-GY-DVRAWDHNPASIASVLDMKARENLP-L-R--TDAYDI----NAAA--LN 92 (195)
T ss_pred hccCCCCcEEEeCCCC-CHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHHHhCCC-c-e--eEeccc----hhcc--cc
Confidence 4445567899899876 7788788874 76 799999998877765442 222 1 0 000111 0010 12
Q ss_pred CCccEEEEccC-----C---hHHHHHHHHhhcCCCEEEEe
Q 020928 208 SGIDVSFDCVG-----F---DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 208 ~~~d~v~d~~g-----~---~~~~~~~~~~l~~~G~~v~~ 239 (319)
..+|+|+.+.. . ...+..+.+.|+++|.++.+
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 46999876422 1 24677888899999995544
No 286
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.69 E-value=0.082 Score=45.39 Aligned_cols=85 Identities=22% Similarity=0.223 Sum_probs=53.4
Q ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCC--Ee--eccC-CCCcchhHHHHHhhh
Q 020928 135 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD--ET--AKVS-TDIEDVDTDVGKIQN 204 (319)
Q Consensus 135 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~--~v--~~~~-~~~~~~~~~i~~~~~ 204 (319)
-.+..++|+| +.++|.+++..+...|+ +|+++.+++++.+...+ .+.. .+ +..+ ...++....+....+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 3567888897 69999999999999999 78888888776544332 2221 11 1111 122333333333334
Q ss_pred hcCCCccEEEEccCCh
Q 020928 205 AMGSGIDVSFDCVGFD 220 (319)
Q Consensus 205 ~~~~~~d~v~d~~g~~ 220 (319)
...+++|+.+++.|..
T Consensus 85 ~~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGAL 100 (270)
T ss_pred HhCCCCCEEEEcCCcC
Confidence 3357899999988864
No 287
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.13 Score=43.42 Aligned_cols=82 Identities=18% Similarity=0.329 Sum_probs=48.9
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc---CCC-EeeccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GAD-ETAKVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
.+.+++|+| +|.+|..+++.+...|. .|+.+++++++.+.+ +++ +.. ..+..+- +.++......++.+.. +
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF-G 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence 467899998 59999999998888898 688888876554332 222 211 1122221 1222222233333322 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999999984
No 288
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.69 E-value=0.11 Score=43.98 Aligned_cols=104 Identities=16% Similarity=0.242 Sum_probs=62.4
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEe--eccC-CCCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVS-TDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v--~~~~-~~~~~~~~~i~~~~~~~~~~ 209 (319)
.+++++|.|+ +++|.++.+.+...|+ +|+.+.++++..+.++++....+ +..+ .+.++....+..+.+.. +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV-GK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh-CC
Confidence 4678999985 4899999998888898 57777666544444454432221 1111 22223333444443322 46
Q ss_pred ccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEecc
Q 020928 210 IDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 210 ~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
+|+++++.|.. + ..+..++.++.+|+++.++.
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss 144 (252)
T PRK06079 84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTY 144 (252)
T ss_pred CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEec
Confidence 99999988731 0 12344566777788887764
No 289
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.13 Score=43.71 Aligned_cols=81 Identities=21% Similarity=0.322 Sum_probs=48.8
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-c--CC-CEeeccCCCC-cchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L--GA-DETAKVSTDI-EDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~--g~-~~v~~~~~~~-~~~~~~i~~~~~~~~~~ 209 (319)
++.++||+| +|.+|..++..+...|+ .|+++++++++.+.+.+ + +. ...+..+-.+ ++.......+.+ .+.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence 467899998 69999999998888898 68888887766554432 2 11 1111111111 122222222222 357
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|.++.+.|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 290
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=95.65 E-value=0.1 Score=45.20 Aligned_cols=57 Identities=23% Similarity=0.296 Sum_probs=46.0
Q ss_pred HhcCCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEe--cCChhHHHHHHHcCCCEee
Q 020928 130 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETA 186 (319)
Q Consensus 130 ~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~~g~~~v~ 186 (319)
+.+.++||.++||-. +|..|.....++...|++.++++ .-+.+|+..++++|+..+.
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 447899999999987 69999999999999999544444 3366888999999987664
No 291
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.64 E-value=0.039 Score=51.18 Aligned_cols=92 Identities=11% Similarity=0.156 Sum_probs=56.5
Q ss_pred hcCCCCCCeEE----EEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCE-eeccCCCCcchhHHHHHhhh
Q 020928 131 RANVGPETNVM----IMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 131 ~~~~~~~~~vl----I~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~i~~~~~ 204 (319)
..++++++.+| |+| +|++|.+++|+++..|+ .|+++...+.+....+..+.+. +++ ....++.+.+..+.
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~l~~~~- 103 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFD--ATGITDPADLKALY- 103 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEE--CCCCCCHHHHHHHH-
Confidence 36788899888 775 79999999999999999 6776655544332222223332 222 22122222222111
Q ss_pred hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEeccc
Q 020928 205 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 242 (319)
Q Consensus 205 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 242 (319)
+..+..++.|.++|+++.++..
T Consensus 104 ----------------~~~~~~l~~l~~~griv~i~s~ 125 (450)
T PRK08261 104 ----------------EFFHPVLRSLAPCGRVVVLGRP 125 (450)
T ss_pred ----------------HHHHHHHHhccCCCEEEEEccc
Confidence 2456667788888898888753
No 292
>PRK08643 acetoin reductase; Validated
Probab=95.64 E-value=0.13 Score=43.63 Aligned_cols=81 Identities=17% Similarity=0.246 Sum_probs=48.8
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-H---cCCCE-eeccCC-CCcchhHHHHHhhhhcCCC
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-N---LGADE-TAKVST-DIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~---~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~~ 209 (319)
++++||+| +|.+|..+++.+...|+ .|+.+++++++.+.+. + .+... .+..+- +.+.....+.++.+. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT-FGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 56889998 69999999998888898 6888877766544332 2 22211 111111 122222333333332 246
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999999875
No 293
>PRK08589 short chain dehydrogenase; Validated
Probab=95.63 E-value=0.12 Score=44.25 Aligned_cols=82 Identities=22% Similarity=0.344 Sum_probs=49.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc---CCC-EeeccC-CCCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~---g~~-~v~~~~-~~~~~~~~~i~~~~~~~~~~ 209 (319)
+++++||.| ++.+|..+++.+...|+ .|+.++++++..+.++++ +.. ..+..+ .+.++....+.++.+.. +.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-GR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence 467899998 59999999988778898 677777774433334333 221 112111 22223333444444333 46
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998874
No 294
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.63 E-value=0.16 Score=44.00 Aligned_cols=92 Identities=24% Similarity=0.287 Sum_probs=54.7
Q ss_pred CeEEEECCCHHHHH-HHHHHHHcCCCeEEEecCChh--HHHHHHHcCCCEeeccCCCCcchhHHHHHhhhh-cCCCccEE
Q 020928 138 TNVMIMGSGPIGLV-TLLAARAFGAPRIIITDVDVQ--RLSIARNLGADETAKVSTDIEDVDTDVGKIQNA-MGSGIDVS 213 (319)
Q Consensus 138 ~~vlI~G~g~vG~~-ai~la~~~g~~~vv~v~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~-~~~~~d~v 213 (319)
-++.|+|+|.+|.. +..+.+.-++..+.+++.+++ ..++++++|..... .+ +..+.+. ...++|+|
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~----ie~LL~~~~~~dIDiV 74 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EG----IDGLLAMPEFDDIDIV 74 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CC----HHHHHhCcCCCCCCEE
Confidence 47899999999986 445555556644445555554 34567777743211 12 2222221 11469999
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEe
Q 020928 214 FDCVGFDKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 214 ~d~~g~~~~~~~~~~~l~~~G~~v~~ 239 (319)
|++.+...+.+....++..+-.++..
T Consensus 75 f~AT~a~~H~e~a~~a~eaGk~VID~ 100 (302)
T PRK08300 75 FDATSAGAHVRHAAKLREAGIRAIDL 100 (302)
T ss_pred EECCCHHHHHHHHHHHHHcCCeEEEC
Confidence 99999875555555565555555543
No 295
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.62 E-value=0.13 Score=44.20 Aligned_cols=105 Identities=21% Similarity=0.274 Sum_probs=61.3
Q ss_pred CCCCeEEEECC---CHHHHHHHHHHHHcCCCeEEEecCChh---HHH-HHHHcCCCEeeccCC-CCcchhHHHHHhhhhc
Q 020928 135 GPETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQ---RLS-IARNLGADETAKVST-DIEDVDTDVGKIQNAM 206 (319)
Q Consensus 135 ~~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~-~~~~~g~~~v~~~~~-~~~~~~~~i~~~~~~~ 206 (319)
-.++++||+|+ +++|.+++..+...|+ +|+.+.+++. +.+ +.++++....+..+- +.++....+.++.+.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK- 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh-
Confidence 35678999985 5899999988888999 5666655532 222 223345322222222 222333333444332
Q ss_pred CCCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEecc
Q 020928 207 GSGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 207 ~~~~d~v~d~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
.+.+|+++++.|.. + ..+.+.+.+..+|+++.++.
T Consensus 86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss 149 (272)
T PRK08159 86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTY 149 (272)
T ss_pred cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 24799999998731 0 12344556677799887764
No 296
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.37 Score=40.36 Aligned_cols=104 Identities=16% Similarity=0.219 Sum_probs=59.0
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecC-ChhHH-HHH---HHcCCC-EeeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRL-SIA---RNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~-~~~~~-~~~---~~~g~~-~v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
++.+++|+| +|.+|..++..+...|.+ ++.+.+ ++.+. +.. +..+.. ..+..+ .+.++..+.++++.+..
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF- 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 467899998 699999999988888984 544443 33222 222 223321 111111 12223333334433322
Q ss_pred CCccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEecc
Q 020928 208 SGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 208 ~~~d~v~d~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
+++|++|.+.|.. + ..+.+.+.+...|+++.++.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss 140 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLST 140 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEee
Confidence 4789999988842 0 12344556667789888874
No 297
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=95.59 E-value=0.21 Score=41.64 Aligned_cols=103 Identities=21% Similarity=0.255 Sum_probs=65.2
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHHHc----CCCEeeccCCCCcchhHHHHHhhh
Q 020928 130 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 130 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~i~~~~~ 204 (319)
...+++++++||=+|+|. |..+..+++..+. ..+++++.+++..+.+++. +.+.+..... +. ..+.
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~----~~~~- 109 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG---NA----MELP- 109 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---ch----hcCC-
Confidence 456788999999999876 7677788887642 2799999998887766642 2222111111 11 1111
Q ss_pred hcCCCccEEEEccC-----C-hHHHHHHHHhhcCCCEEEEecc
Q 020928 205 AMGSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 205 ~~~~~~d~v~d~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 241 (319)
.....+|+|+-+.. . ...+..+.+.|+++|+++....
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 01356899875322 1 2356778899999999987653
No 298
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.14 Score=43.41 Aligned_cols=83 Identities=18% Similarity=0.284 Sum_probs=50.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHH----HHHHcCCCEe-eccCCC-CcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADET-AKVSTD-IEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~~g~~~v-~~~~~~-~~~~~~~i~~~~~~~~~ 208 (319)
++.+++|.| +|.+|..+++.+...|++.|+.+++++++.+ .+++.+.... +..+-. .++..+.+..+.+.. +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF-G 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 467899998 5999999999888889854888877765443 2223333221 111211 222223333332222 3
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|.+|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999985
No 299
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=95.58 E-value=0.052 Score=45.48 Aligned_cols=106 Identities=23% Similarity=0.386 Sum_probs=62.4
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhh
Q 020928 130 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 130 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~ 204 (319)
+....++|++||=.|+|. |..+..+++..+. ..|+++|.+++-++.+++ .+...+.-...+.++ +.
T Consensus 41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~-------lp- 111 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAED-------LP- 111 (233)
T ss_dssp HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB----------
T ss_pred hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHH-------hc-
Confidence 346788999999988766 7788888888763 279999999988877765 222222111111111 11
Q ss_pred hcCCCccEEEEccCCh------HHHHHHHHhhcCCCEEEEecccCC
Q 020928 205 AMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAKT 244 (319)
Q Consensus 205 ~~~~~~d~v~d~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~ 244 (319)
..++.+|.|.-+.|-. ..+.++.+.|+|||+++.+....+
T Consensus 112 ~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~p 157 (233)
T PF01209_consen 112 FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSKP 157 (233)
T ss_dssp S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB-
T ss_pred CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccCC
Confidence 0245689998666542 467889999999999998875443
No 300
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.13 Score=43.74 Aligned_cols=81 Identities=19% Similarity=0.159 Sum_probs=48.7
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-HcCCC-Ee--eccCC-CCcchhHHHHHhhhhcCCCc
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGAD-ET--AKVST-DIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~-~v--~~~~~-~~~~~~~~i~~~~~~~~~~~ 210 (319)
+.+++|+| +|.+|..++..+...|+ .|+.+++++++.+.+. ++... .+ +..+- +.++..+.+.++.+.. +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAH-GLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence 46899998 69999999998888898 6777877776654433 23211 11 11111 1223333333333322 358
Q ss_pred cEEEEccCC
Q 020928 211 DVSFDCVGF 219 (319)
Q Consensus 211 d~v~d~~g~ 219 (319)
|+++.+.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998874
No 301
>PRK04266 fibrillarin; Provisional
Probab=95.57 E-value=0.36 Score=40.27 Aligned_cols=104 Identities=11% Similarity=0.157 Sum_probs=61.8
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcC--CCEeeccCCCCcchhHHHHHhhhhcC
Q 020928 130 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 130 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~~~i~~~~~~~~ 207 (319)
+..+++++++||=.|+|+ |..+..+++..+...|++++.+++..+.+.+.- ...+.....+..+. .....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~-~~~~~l----~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKP-ERYAHV----V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCc-chhhhc----c
Confidence 457899999999888765 556667777765337999999997666443221 11111111111110 000011 2
Q ss_pred CCccEEEEccCChH----HHHHHHHhhcCCCEEEEe
Q 020928 208 SGIDVSFDCVGFDK----TMSTALNATRPGGKVCLI 239 (319)
Q Consensus 208 ~~~d~v~d~~g~~~----~~~~~~~~l~~~G~~v~~ 239 (319)
..+|+++-....+. .+..+.+.|+++|+++..
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 35999986554331 357788899999999873
No 302
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.56 E-value=0.79 Score=37.44 Aligned_cols=81 Identities=20% Similarity=0.241 Sum_probs=53.5
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
-.|.+++|.|.|.+|..+.+.+...|+ +|++.+.++++.+.+++ +++..+ + . + ++. ...+|++
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~v-~--~--~-------~l~---~~~~Dv~ 89 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATVV-A--P--E-------EIY---SVDADVF 89 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEEE-c--c--h-------hhc---cccCCEE
Confidence 356889999999999999999999999 78888888877665544 454321 1 1 0 111 2357888
Q ss_pred EEccCChHHHHHHHHhhc
Q 020928 214 FDCVGFDKTMSTALNATR 231 (319)
Q Consensus 214 ~d~~g~~~~~~~~~~~l~ 231 (319)
+-|..+.......++.|+
T Consensus 90 vp~A~~~~I~~~~~~~l~ 107 (200)
T cd01075 90 APCALGGVINDDTIPQLK 107 (200)
T ss_pred EecccccccCHHHHHHcC
Confidence 865544334444555554
No 303
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.56 E-value=0.074 Score=45.67 Aligned_cols=52 Identities=19% Similarity=0.126 Sum_probs=41.1
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH
Q 020928 128 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN 179 (319)
Q Consensus 128 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~ 179 (319)
+++......+++++|+|+|+.+.+++..+...|+.++.++++++++.+.+.+
T Consensus 113 ~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~ 164 (272)
T PRK12550 113 LLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAE 164 (272)
T ss_pred HHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence 4444344556789999999999999999999999889999998887665543
No 304
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.15 Score=43.13 Aligned_cols=82 Identities=18% Similarity=0.220 Sum_probs=50.1
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH----HcCCCE-eeccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
++.+++|+| +|++|..++..+...|+ +|+.+++++++.+.+. +.+... .+..+- +.++....+.++.+.. +
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF-G 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-C
Confidence 357899998 59999999998888898 6777777776654332 223221 121121 1222333334443322 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|++|.+.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 305
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.55 E-value=0.14 Score=45.14 Aligned_cols=81 Identities=21% Similarity=0.334 Sum_probs=48.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCC---C-EeeccC-CCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGA---D-ETAKVS-TDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~---~-~v~~~~-~~~~~~~~~i~~~~~~~~~ 208 (319)
.+.+++|+| +|.+|..+++.+...|+ .|+.+++++++.+.+ +++.. . ..+..+ .+.++....+..+.+ ...
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA-LGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH-hCC
Confidence 467899998 59999999988888898 677777777665433 33321 1 111111 112222223333322 234
Q ss_pred CccEEEEccC
Q 020928 209 GIDVSFDCVG 218 (319)
Q Consensus 209 ~~d~v~d~~g 218 (319)
.+|++|++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999987
No 306
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.19 Score=42.16 Aligned_cols=83 Identities=18% Similarity=0.224 Sum_probs=50.5
Q ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCE-eeccCC-CCcchhHHHHHhhhhcC
Q 020928 135 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVST-DIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 135 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~ 207 (319)
....+++|.| +|.+|..++..+...|. +|+++++++++.+.+.+ .+... .+..+- +.++....+..+.+. .
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 81 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ-F 81 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 3457899998 59999999998888898 68888887765443322 22211 122221 122222333333332 2
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+++|.++.+.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 469999999884
No 307
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.53 E-value=0.15 Score=43.15 Aligned_cols=82 Identities=20% Similarity=0.310 Sum_probs=49.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCCE-eeccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
.++++||+| +|.+|..+++.+...|+ .|+.+++++++.+.+ ++.|... .+..+- +.++....+.++.+. -+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE-IG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh-cC
Confidence 467999998 59999999998888898 677787776654322 2222211 111111 122223333333322 34
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|.+|.+.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 68999999985
No 308
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.53 E-value=0.15 Score=42.60 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=48.7
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhH-HHHHHHcCCCEeeccC-CCCcchhHHHHHhhhhcCCCccEE
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
++++||.| ++.+|..+++.+...|+ .|+.++++++. .+.+++.+.. .+..+ .+.++....+.++.+. -+++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQH-TDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhh-CCCccEE
Confidence 46889998 59999999998888898 57777665533 3334444532 22222 1222333334444332 2468999
Q ss_pred EEccCC
Q 020928 214 FDCVGF 219 (319)
Q Consensus 214 ~d~~g~ 219 (319)
+++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 999874
No 309
>PRK06194 hypothetical protein; Provisional
Probab=95.52 E-value=0.16 Score=43.91 Aligned_cols=81 Identities=20% Similarity=0.326 Sum_probs=48.4
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc---CCCE-eeccCCC-CcchhHHHHHhhhhcCCC
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVSTD-IEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~-v~~~~~~-~~~~~~~i~~~~~~~~~~ 209 (319)
+.++||+| +|.+|..++..+...|. .|+.++++.++.+.. .++ +... .+..+-. .++....+..+.+. .++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~g~ 83 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER-FGA 83 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 57899998 69999999988888898 677777766543332 222 3221 1222211 22222333333222 246
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|++|.+.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999999985
No 310
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.52 E-value=0.1 Score=44.36 Aligned_cols=97 Identities=19% Similarity=0.297 Sum_probs=61.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc----CCCEeeccCCCCcchhHHHHHhhhhcCCCc
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~ 210 (319)
.++.+||-+|+|. |..+..+++. |. .|++++.+++..+.+++. |...-+.+.. .+ +..+.......+
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~--~d----~~~l~~~~~~~f 113 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH--CA----AQDIAQHLETPV 113 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE--cC----HHHHhhhcCCCC
Confidence 4567888889877 7888888875 66 799999999888877653 2211111100 11 111211124579
Q ss_pred cEEEEccC-----C-hHHHHHHHHhhcCCCEEEEec
Q 020928 211 DVSFDCVG-----F-DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 211 d~v~d~~g-----~-~~~~~~~~~~l~~~G~~v~~g 240 (319)
|+|+-... . ...+..+.+.|+|+|+++.+-
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 99874321 2 235778899999999997653
No 311
>KOG3201 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.51 E-value=0.093 Score=40.55 Aligned_cols=117 Identities=17% Similarity=0.226 Sum_probs=74.5
Q ss_pred HHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcC-CCEeeccCCCC-cchhHHHH
Q 020928 123 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-ADETAKVSTDI-EDVDTDVG 200 (319)
Q Consensus 123 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g-~~~v~~~~~~~-~~~~~~i~ 200 (319)
+.||+.++..+.-.|.+|+-.|+|-.|++-+.+|...-.+.|-.++.+++..+.+++.- ......+++-. -.+. ...
T Consensus 16 ala~~~l~~~n~~rg~~ilelgggft~laglmia~~a~~~~v~ltdgne~svrnv~ki~~~n~~s~~tsc~vlrw~-~~~ 94 (201)
T KOG3201|consen 16 ALAWTILRDPNKIRGRRILELGGGFTGLAGLMIACKAPDSSVWLTDGNEESVRNVEKIRNSNMASSLTSCCVLRWL-IWG 94 (201)
T ss_pred HHHHHHHhchhHHhHHHHHHhcCchhhhhhhheeeecCCceEEEecCCHHHHHHHHHHHhcccccccceehhhHHH-Hhh
Confidence 45788887777777789999999999999999999888778999999998888777632 11111111100 0000 000
Q ss_pred HhhhhcCCCccEEEE--ccCCh----HHHHHHHHhhcCCCEEEEec
Q 020928 201 KIQNAMGSGIDVSFD--CVGFD----KTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 201 ~~~~~~~~~~d~v~d--~~g~~----~~~~~~~~~l~~~G~~v~~g 240 (319)
.....-+..||+|+. |+--+ ++...++.+|+|.|+-..+.
T Consensus 95 aqsq~eq~tFDiIlaADClFfdE~h~sLvdtIk~lL~p~g~Al~fs 140 (201)
T KOG3201|consen 95 AQSQQEQHTFDIILAADCLFFDEHHESLVDTIKSLLRPSGRALLFS 140 (201)
T ss_pred hHHHHhhCcccEEEeccchhHHHHHHHHHHHHHHHhCcccceeEec
Confidence 001112457999864 44333 35566777899999966554
No 312
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.50 E-value=0.15 Score=43.62 Aligned_cols=81 Identities=14% Similarity=0.177 Sum_probs=46.9
Q ss_pred CCCeEEEECCC---HHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc----CCCEeeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G~g---~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
.+++++|.|++ ++|.++.+.+...|+ .|+.+++++...+.++++ +....+..+ .+.++....+.++.+. -
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV-W 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh-c
Confidence 46789999853 799998887777898 566666653222333332 222222222 2223333344444332 2
Q ss_pred CCccEEEEccC
Q 020928 208 SGIDVSFDCVG 218 (319)
Q Consensus 208 ~~~d~v~d~~g 218 (319)
+.+|+++++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 46999999997
No 313
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=95.50 E-value=0.58 Score=40.08 Aligned_cols=101 Identities=20% Similarity=0.274 Sum_probs=61.6
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHcC-CCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhh
Q 020928 131 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 131 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~ 205 (319)
..+++++++||=.|+|+ |-.++.++...+ ...|++++.++++.+.+++ +|...+..... |.. .+..
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~---D~~----~~~~- 136 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF---DGR----VFGA- 136 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC---CHH----Hhhh-
Confidence 35678999988888766 555556666553 2279999999998776654 55543322211 111 1111
Q ss_pred cCCCccEEE-E--ccCC-------------------------hHHHHHHHHhhcCCCEEEEec
Q 020928 206 MGSGIDVSF-D--CVGF-------------------------DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 206 ~~~~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g 240 (319)
....+|.|| | |.|. .+.+..+++.|+++|+++...
T Consensus 137 ~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYst 199 (264)
T TIGR00446 137 AVPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYST 199 (264)
T ss_pred hccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 123589886 3 3332 125677788999999987543
No 314
>PRK05717 oxidoreductase; Validated
Probab=95.49 E-value=0.17 Score=42.92 Aligned_cols=82 Identities=21% Similarity=0.285 Sum_probs=49.5
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHH-HHHHcCCCE-eeccCC-CCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVST-DIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~~~d 211 (319)
.+.+++|+| +|.+|..++..+...|+ +|+.+++++++.+ ..++++... .+..+- +..+....+.++.+.. +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQF-GRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 467899998 69999999988888898 6777776665433 334444221 112111 1222223334443322 3689
Q ss_pred EEEEccCC
Q 020928 212 VSFDCVGF 219 (319)
Q Consensus 212 ~v~d~~g~ 219 (319)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
No 315
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.49 E-value=0.11 Score=45.84 Aligned_cols=80 Identities=18% Similarity=0.312 Sum_probs=48.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-Hc----CCCEe----eccCCCCcchhHHHHHhhhh
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL----GADET----AKVSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~~----g~~~v----~~~~~~~~~~~~~i~~~~~~ 205 (319)
.|.+++|+| ++++|.+.+..+...|+ .|+.+++++++.+.+. ++ +...+ .|+.. +..+.+.++.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~---~~~~~~~~l~~~ 127 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG---DIDEGVKRIKET 127 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC---CcHHHHHHHHHH
Confidence 578999998 59999988887777898 5777888887765432 22 11121 22221 222333333332
Q ss_pred c-CCCccEEEEccCC
Q 020928 206 M-GSGIDVSFDCVGF 219 (319)
Q Consensus 206 ~-~~~~d~v~d~~g~ 219 (319)
. +.++|+++++.|.
T Consensus 128 ~~~~didilVnnAG~ 142 (320)
T PLN02780 128 IEGLDVGVLINNVGV 142 (320)
T ss_pred hcCCCccEEEEecCc
Confidence 2 2356799998873
No 316
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.48 E-value=0.28 Score=43.52 Aligned_cols=90 Identities=21% Similarity=0.246 Sum_probs=61.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.|.+|.|+|.|.+|..+++.++.+|. .|++.+++.... ...+.+... .+ +.++. ...|+|+-
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~--------~~----l~ell----~~aDiV~l 210 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY--------RP----LEELL----RESDFVSL 210 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe--------cC----HHHHH----hhCCEEEE
Confidence 46899999999999999999999999 688888765432 223333211 01 22222 24688888
Q ss_pred ccCChHH-----HHHHHHhhcCCCEEEEecccC
Q 020928 216 CVGFDKT-----MSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 216 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~ 243 (319)
++..... -...+..|+++..++.++...
T Consensus 211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~ 243 (333)
T PRK13243 211 HVPLTKETYHMINEERLKLMKPTAILVNTARGK 243 (333)
T ss_pred eCCCChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence 7765321 135677889999999887543
No 317
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.18 Score=43.10 Aligned_cols=82 Identities=18% Similarity=0.228 Sum_probs=49.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HH---cCCC-EeeccCCC-CcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGAD-ETAKVSTD-IEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---~g~~-~v~~~~~~-~~~~~~~i~~~~~~~~~ 208 (319)
+++++||.| +|.+|..+++.+...|. .|+.+++++++.+.. ++ .+.. ..+..+-. .++....++++... .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-FG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 578999998 59999999998888898 688887776654322 22 2221 11222221 22233333333332 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|++|.+.|.
T Consensus 86 ~iD~vi~~ag~ 96 (264)
T PRK07576 86 PIDVLVSGAAG 96 (264)
T ss_pred CCCEEEECCCC
Confidence 68999988763
No 318
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.46 E-value=0.033 Score=43.13 Aligned_cols=100 Identities=14% Similarity=0.168 Sum_probs=57.6
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccCC
Q 020928 140 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 219 (319)
Q Consensus 140 vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~ 219 (319)
|+|+|+|++|......++..|. .|..+.+.+ +.+.+++.|......-....-......... ......+|++|-|+=.
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~viv~vKa 77 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-SADAGPYDLVIVAVKA 77 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-GHHHSTESEEEE-SSG
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-hhccCCCcEEEEEecc
Confidence 6889999999988888877888 677777777 777777766432211000000000000000 0124679999998866
Q ss_pred hH---HHHHHHHhhcCCCEEEEeccc
Q 020928 220 DK---TMSTALNATRPGGKVCLIGLA 242 (319)
Q Consensus 220 ~~---~~~~~~~~l~~~G~~v~~g~~ 242 (319)
.. .++.+.+.+.++..++.+...
T Consensus 78 ~~~~~~l~~l~~~~~~~t~iv~~qNG 103 (151)
T PF02558_consen 78 YQLEQALQSLKPYLDPNTTIVSLQNG 103 (151)
T ss_dssp GGHHHHHHHHCTGEETTEEEEEESSS
T ss_pred cchHHHHHHHhhccCCCcEEEEEeCC
Confidence 42 334444455666677776543
No 319
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.46 E-value=0.14 Score=43.26 Aligned_cols=81 Identities=19% Similarity=0.228 Sum_probs=46.5
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEe-cCChhHHHHH-HHcCCC-EeeccCC-CCcchhHHHHHhhhhcCCCcc
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIA-RNLGAD-ETAKVST-DIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~-~~~g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~~~d 211 (319)
+.++||+| +|.+|..++..+...|++ |+.+ .+++++.+.+ .+++.. ..+..+- +.++....+.++.+..+.++|
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGAR-VVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 46899998 699999999988888984 5444 4444443333 334321 1111111 222333344444433344599
Q ss_pred EEEEccC
Q 020928 212 VSFDCVG 218 (319)
Q Consensus 212 ~v~d~~g 218 (319)
++|.+.|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9999876
No 320
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.45 E-value=0.17 Score=42.95 Aligned_cols=79 Identities=27% Similarity=0.307 Sum_probs=48.1
Q ss_pred eEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc---CCCEeeccC-CCCcchhHHHHHhhhhcCCCccE
Q 020928 139 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 139 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~v~~~~-~~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
++||+| ++++|..+++.+...|+ .|+.+++++++.+.+ +++ +....+..+ .+.++....+.++.+. -+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWEL-LGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence 689998 59999999988888898 677777877654433 222 211222222 1222333334443332 247999
Q ss_pred EEEccCC
Q 020928 213 SFDCVGF 219 (319)
Q Consensus 213 v~d~~g~ 219 (319)
+|++.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9999884
No 321
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.45 E-value=0.12 Score=46.84 Aligned_cols=72 Identities=19% Similarity=0.369 Sum_probs=54.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHH-HHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 214 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~ 214 (319)
.+.++||+|+|-+|..++..+...|+..+.++.++.++.+ +++++|+..+ .++ .+... -..+|+||
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~--------el~~~----l~~~DvVi 243 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE--------ELLEA----LAEADVVI 243 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH--------HHHHh----hhhCCEEE
Confidence 6788999999999999999999999888999988887654 6677884332 221 11111 14689999
Q ss_pred EccCCh
Q 020928 215 DCVGFD 220 (319)
Q Consensus 215 d~~g~~ 220 (319)
.+++.+
T Consensus 244 ssTsa~ 249 (414)
T COG0373 244 SSTSAP 249 (414)
T ss_pred EecCCC
Confidence 999986
No 322
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.45 E-value=0.1 Score=48.73 Aligned_cols=77 Identities=21% Similarity=0.325 Sum_probs=51.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCCh---------------------hHHHHHHHcCCCEeeccCCCCcc
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV---------------------QRLSIARNLGADETAKVSTDIED 194 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~---------------------~~~~~~~~~g~~~v~~~~~~~~~ 194 (319)
++++|+|+|+|+.|+.+...++..|. .|++++..+ ...+.++++|.+...+..- ..+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GRD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CCc
Confidence 57899999999999999999999999 576666543 2456777888654432110 011
Q ss_pred hhHHHHHhhhhcCCCccEEEEccCCh
Q 020928 195 VDTDVGKIQNAMGSGIDVSFDCVGFD 220 (319)
Q Consensus 195 ~~~~i~~~~~~~~~~~d~v~d~~g~~ 220 (319)
. .+..+. .++|.||.++|..
T Consensus 218 ~--~~~~~~----~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 I--SLDDLL----EDYDAVFLGVGTY 237 (467)
T ss_pred c--CHHHHH----hcCCEEEEEeCCC
Confidence 1 111221 3699999999975
No 323
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.13 Score=42.65 Aligned_cols=77 Identities=27% Similarity=0.330 Sum_probs=48.3
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhh-hcCCCccEEEE
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-AMGSGIDVSFD 215 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~-~~~~~~d~v~d 215 (319)
.+++|+| +|.+|..+++.+...|+ +|+.++++++..+.++..+... +..+-.+. +.+..+.+ ..+.++|+++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~D~~~~---~~v~~~~~~~~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEA-LALDVADP---ASVAGLAWKLDGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceE-EEecCCCH---HHHHHHHHHhcCCCCCEEEE
Confidence 4688888 69999999887777898 6788888877766666555322 22221111 12222221 12346999999
Q ss_pred ccCC
Q 020928 216 CVGF 219 (319)
Q Consensus 216 ~~g~ 219 (319)
+.|.
T Consensus 77 ~ag~ 80 (222)
T PRK06953 77 VAGV 80 (222)
T ss_pred CCCc
Confidence 8775
No 324
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.064 Score=45.89 Aligned_cols=78 Identities=24% Similarity=0.260 Sum_probs=48.6
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEe-eccCCCCcchhHHHHHhhhhcCCCccEEE
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSF 214 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~i~~~~~~~~~~~d~v~ 214 (319)
+.+++|+| +|.+|..+++.+...|+ .|+++++++++.+.. .+...+ .|+ .+.+++...+..+.+. .+.+|++|
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~-~d~~~~~~~~~~~~~~-~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDV-TDDASVQAAVDEVIAR-AGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeec-CCHHHHHHHHHHHHHh-CCCCCEEE
Confidence 56789998 59999999988888898 678887776554321 122111 122 2223334444444333 24699999
Q ss_pred EccCC
Q 020928 215 DCVGF 219 (319)
Q Consensus 215 d~~g~ 219 (319)
++.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99985
No 325
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.41 E-value=0.26 Score=43.35 Aligned_cols=94 Identities=12% Similarity=0.180 Sum_probs=56.6
Q ss_pred eEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEcc
Q 020928 139 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 217 (319)
Q Consensus 139 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~ 217 (319)
+|||+| +|-+|..++..+...|. .|.+++++.++...+...+...+. .+-. +. ..+.... .++|+||+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~Dl~--d~-~~l~~al----~g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GDLS--LP-ETLPPSF----KGVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CCCC--CH-HHHHHHH----CCCCEEEECC
Confidence 689998 59999999998888898 677777776665554444543321 1111 11 1222222 3689999987
Q ss_pred CChH------------HHHHHHHhhcCCC--EEEEecc
Q 020928 218 GFDK------------TMSTALNATRPGG--KVCLIGL 241 (319)
Q Consensus 218 g~~~------------~~~~~~~~l~~~G--~~v~~g~ 241 (319)
+... ....+++.++..| +++.++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 6320 1123444444444 7887765
No 326
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.39 Score=40.53 Aligned_cols=105 Identities=16% Similarity=0.216 Sum_probs=58.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEe-cCChhHH-HHHHH---cCCC-EeeccCC-CCcchhHHHHHhhhh--
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRL-SIARN---LGAD-ETAKVST-DIEDVDTDVGKIQNA-- 205 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~-~~~~~---~g~~-~v~~~~~-~~~~~~~~i~~~~~~-- 205 (319)
.+.+++|+| ++.+|.++++.+...|+ .|+.. .+.+++. +...+ .+.. ..+..+- ..++....+.++.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 467899998 69999999998888998 45554 3443332 22222 2221 1111111 111222223333221
Q ss_pred --cC-CCccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEecc
Q 020928 206 --MG-SGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 206 --~~-~~~d~v~d~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
.+ .++|+++++.|.. + ..+.+++.+...|+++.++.
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS 145 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISS 145 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECC
Confidence 12 3799999998841 0 12345566667799998875
No 327
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.18 Score=42.59 Aligned_cols=82 Identities=22% Similarity=0.303 Sum_probs=49.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCC-EeeccCCC-CcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGAD-ETAKVSTD-IEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~v~~~~~~-~~~~~~~i~~~~~~~~~ 208 (319)
++.+++|.| +|.+|..+++.+...|. +|+.+++++++.+.+ ++.+.. ..+..+-. ..+....+.++.+.. +
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY-G 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence 467899998 59999999988888898 688888877654322 233322 11211211 122223333333322 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 328
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.38 E-value=0.24 Score=41.53 Aligned_cols=105 Identities=18% Similarity=0.201 Sum_probs=66.6
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcC-CCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhhc
Q 020928 132 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 132 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~~ 206 (319)
.+..++++||-+|+|. |..++.+++..+ ..++++++.+++..+.+++ .|...-+.+ ...+..+.+.++....
T Consensus 64 ~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~--~~gda~~~L~~l~~~~ 140 (234)
T PLN02781 64 VKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINF--IQSDALSALDQLLNND 140 (234)
T ss_pred HHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEccHHHHHHHHHhCC
Confidence 5567788999999754 666667777653 3389999999988777655 443322221 1234444444443221
Q ss_pred -CCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEe
Q 020928 207 -GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 207 -~~~~d~v~d~~g~---~~~~~~~~~~l~~~G~~v~~ 239 (319)
...||.||--..- ...+..+.+.++++|.++.-
T Consensus 141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d 177 (234)
T PLN02781 141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD 177 (234)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 3579999744321 24577888999999987753
No 329
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.19 Score=44.14 Aligned_cols=82 Identities=16% Similarity=0.220 Sum_probs=48.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc----CCCEe--eccC-CCCcchhHHHHHhhhhc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADET--AKVS-TDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~----g~~~v--~~~~-~~~~~~~~~i~~~~~~~ 206 (319)
.+.+++|+| ++++|..++..+...|+ +|+.+.+++++.+.+ +++ +...+ +..+ .+.++......++.+.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~- 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE- 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh-
Confidence 367899998 59999999988878898 677777776654322 222 11111 1111 1122222233333322
Q ss_pred CCCccEEEEccCC
Q 020928 207 GSGIDVSFDCVGF 219 (319)
Q Consensus 207 ~~~~d~v~d~~g~ 219 (319)
.+.+|++|++.|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 3578999998874
No 330
>PRK07985 oxidoreductase; Provisional
Probab=95.36 E-value=0.44 Score=41.43 Aligned_cols=104 Identities=16% Similarity=0.153 Sum_probs=59.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCh--hHHHHH----HHcCCCE-eeccCC-CCcchhHHHHHhhhhc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV--QRLSIA----RNLGADE-TAKVST-DIEDVDTDVGKIQNAM 206 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~--~~~~~~----~~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~ 206 (319)
++.++||.| +|.+|.++++.+...|+ .|+.+.++. ++.+.+ ++.+... .+..+- +.++....+.++.+.
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA- 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 457899998 59999999998888898 566654332 222222 2233221 121121 222333333333332
Q ss_pred CCCccEEEEccCCh--------------------------HHHHHHHHhhcCCCEEEEecc
Q 020928 207 GSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 207 ~~~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~ 241 (319)
-+++|+++.+.|.. ...+.+.+.+..+|+++.++.
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS 186 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSS 186 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECC
Confidence 34789999887731 023344555667789988774
No 331
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.35 E-value=0.18 Score=49.30 Aligned_cols=114 Identities=23% Similarity=0.394 Sum_probs=65.5
Q ss_pred cceeEEeecCCceEeCCCCCChhhhhccchhHHHHHHHHhc---CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEe
Q 020928 92 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA---NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT 167 (319)
Q Consensus 92 ~~~e~~~~~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~---~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v 167 (319)
+..+|..+++...+.+ +-+++|++-+ ++. ..-.++++||+| +|.+|..+++.+...|+ .|+.+
T Consensus 378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl-----------~~~~~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~ 444 (676)
T TIGR02632 378 AVSEYVSLPEQEAFDI-EYWPLEEAKL-----------RRMPKEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLA 444 (676)
T ss_pred cccceecCchhhccch-hhhhhhHHhh-----------ccCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEE
Confidence 3455666666666666 5555555521 111 111367899998 69999999998888898 68888
Q ss_pred cCChhHHHHHH-Hc----CCCEe--eccC-CCCcchhHHHHHhhhhcCCCccEEEEccCC
Q 020928 168 DVDVQRLSIAR-NL----GADET--AKVS-TDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 219 (319)
Q Consensus 168 ~~~~~~~~~~~-~~----g~~~v--~~~~-~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~ 219 (319)
+++.++.+.+. ++ +...+ +..+ .+..++...+.++.+. -+++|++|++.|.
T Consensus 445 ~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~-~g~iDilV~nAG~ 503 (676)
T TIGR02632 445 DLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA-YGGVDIVVNNAGI 503 (676)
T ss_pred eCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh-cCCCcEEEECCCC
Confidence 78776554332 22 22111 1111 1222333333333332 3479999999985
No 332
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.33 E-value=0.11 Score=41.07 Aligned_cols=93 Identities=22% Similarity=0.332 Sum_probs=58.4
Q ss_pred eEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEcc
Q 020928 139 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 217 (319)
Q Consensus 139 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~ 217 (319)
+|.|+| +|-+|...++-|+.+|. .|.++.+++++....+..-. . ..+--+... +.. .=.++|+||++.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i---~--q~Difd~~~-~a~----~l~g~DaVIsA~ 70 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTI---L--QKDIFDLTS-LAS----DLAGHDAVISAF 70 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhcccccccee---e--cccccChhh-hHh----hhcCCceEEEec
Confidence 578888 59999999999999998 68888898888654321111 0 010001111 111 124899999999
Q ss_pred CCh---------HHHHHHHHhhcCCC--EEEEeccc
Q 020928 218 GFD---------KTMSTALNATRPGG--KVCLIGLA 242 (319)
Q Consensus 218 g~~---------~~~~~~~~~l~~~G--~~v~~g~~ 242 (319)
|.. ...+.+...|+..| |+..+|..
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 875 12344666676644 77777753
No 333
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=95.33 E-value=0.16 Score=41.62 Aligned_cols=99 Identities=14% Similarity=0.104 Sum_probs=63.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d 211 (319)
++.+||-+|+|. |..+..+++......+++++.+++..+.+++ .+...+.... .+....+... .....+|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D 113 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD 113 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence 667888899877 7788888887654479999999988877764 2322221111 1221122111 1234688
Q ss_pred EEEEccC--------------ChHHHHHHHHhhcCCCEEEEec
Q 020928 212 VSFDCVG--------------FDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 212 ~v~d~~g--------------~~~~~~~~~~~l~~~G~~v~~g 240 (319)
.|+-... ....++.+.+.|+++|.++...
T Consensus 114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~ 156 (202)
T PRK00121 114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT 156 (202)
T ss_pred eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence 8875432 1346788899999999998653
No 334
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.18 Score=42.78 Aligned_cols=82 Identities=23% Similarity=0.304 Sum_probs=50.0
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc-----CCC-EeeccC-CCCcchhHHHHHhhhhc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL-----GAD-ETAKVS-TDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~-----g~~-~v~~~~-~~~~~~~~~i~~~~~~~ 206 (319)
.+++++|.| +|++|..+++.+...|+ .|+.+++++++.+.+ +++ +.. ..+..+ .+.++....+.++.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 367899998 59999999998888898 677777776654433 222 211 111111 12223333444443322
Q ss_pred CCCccEEEEccCC
Q 020928 207 GSGIDVSFDCVGF 219 (319)
Q Consensus 207 ~~~~d~v~d~~g~ 219 (319)
+.+|++|.+.|.
T Consensus 85 -g~id~li~~ag~ 96 (260)
T PRK07063 85 -GPLDVLVNNAGI 96 (260)
T ss_pred -CCCcEEEECCCc
Confidence 479999999884
No 335
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.2 Score=42.30 Aligned_cols=82 Identities=16% Similarity=0.244 Sum_probs=49.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-H---cCCC-EeeccC-CCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-N---LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~---~g~~-~v~~~~-~~~~~~~~~i~~~~~~~~~ 208 (319)
++.++||.| +|.+|..+++.+...|. +|+.++++.++.+.+. + .+.. ..+..+ .+..+....+.++.+.. +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH-G 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 357899998 69999999998888898 6888888766544332 2 2221 112111 12222333333333322 3
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|+++.+.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 336
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.32 E-value=0.21 Score=43.86 Aligned_cols=90 Identities=12% Similarity=0.141 Sum_probs=60.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.+.+|.|+|.|.+|....+.++.+|. +|.+.+++.++.. +..... . ...+.++. ...|+|+-
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~---~-----~~~l~e~l----~~aDvvv~ 196 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA---G-----REELSAFL----SQTRVLIN 196 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec---c-----cccHHHHH----hcCCEEEE
Confidence 57899999999999999999999999 6778776543311 111111 0 01222232 35789988
Q ss_pred ccCChHHH-----HHHHHhhcCCCEEEEecccC
Q 020928 216 CVGFDKTM-----STALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 216 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 243 (319)
+....... ...++.|+++..++.++...
T Consensus 197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 229 (312)
T PRK15469 197 LLPNTPETVGIINQQLLEQLPDGAYLLNLARGV 229 (312)
T ss_pred CCCCCHHHHHHhHHHHHhcCCCCcEEEECCCcc
Confidence 88754322 34677899999999887543
No 337
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.31 E-value=0.69 Score=38.32 Aligned_cols=91 Identities=13% Similarity=0.073 Sum_probs=54.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecC--ChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV--DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
++.+|||+|+|.++.-=+..+...|+ .|.+++. +++-.++. +.+.-..+. . ++... . -.++++|
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~-~~~~i~~~~---r--~~~~~--d-----l~g~~LV 89 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLK-KYGNLKLIK---G--NYDKE--F-----IKDKHLI 89 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHH-hCCCEEEEe---C--CCChH--H-----hCCCcEE
Confidence 46799999999999887888878898 4555533 22222222 222211111 1 11111 1 1468999
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 214 FDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 214 ~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
|-|++.++.-+.+....+..+.++...
T Consensus 90 iaATdD~~vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 90 VIATDDEKLNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred EECCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 999998865556666666667666554
No 338
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.31 E-value=0.19 Score=42.57 Aligned_cols=82 Identities=20% Similarity=0.187 Sum_probs=48.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHH---HHHHcCCC-EeeccCC-CCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNLGAD-ETAKVST-DIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~~g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~~ 209 (319)
.+.++||+| +|.+|..+++.+...|+ .|+.+.++++..+ .+.+.+.. ..+..+- +.++....+.++.+. .+.
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 468999998 59999999998888899 5666666532222 22233322 1122222 122333334444332 246
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|.++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 339
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.2 Score=42.23 Aligned_cols=82 Identities=22% Similarity=0.289 Sum_probs=48.8
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHH-HHHc--CCC-EeeccCCC-CcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL--GAD-ETAKVSTD-IEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~~--g~~-~v~~~~~~-~~~~~~~i~~~~~~~~~~ 209 (319)
++.+++|.| +|.+|..+++.+...|. +|+.+.++.++.+. .+++ +.. ..+..+-. .++..+.+.++.+.. ++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW-GR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence 357899998 59999999987777898 67777777654433 2222 221 12222221 222223333333322 47
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|+++.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 340
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.30 E-value=0.11 Score=50.40 Aligned_cols=77 Identities=23% Similarity=0.288 Sum_probs=52.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChh---------------------HHHHHHHcCCCEeeccCCCCcc
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---------------------RLSIARNLGADETAKVSTDIED 194 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~~g~~~v~~~~~~~~~ 194 (319)
.+++|+|+|+|+.|+.++..++..|. .|++++..+. ..++++++|.+...+..- ..+
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~ 386 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEI-GRD 386 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCcc-CCc
Confidence 48999999999999999999999999 5777765542 456777788655433211 111
Q ss_pred hhHHHHHhhhhcCCCccEEEEccCCh
Q 020928 195 VDTDVGKIQNAMGSGIDVSFDCVGFD 220 (319)
Q Consensus 195 ~~~~i~~~~~~~~~~~d~v~d~~g~~ 220 (319)
. .+..+ ..++|.||.++|..
T Consensus 387 ~--~~~~l----~~~~DaV~latGa~ 406 (639)
T PRK12809 387 I--TFSDL----TSEYDAVFIGVGTY 406 (639)
T ss_pred C--CHHHH----HhcCCEEEEeCCCC
Confidence 1 12222 23689999999974
No 341
>PLN03013 cysteine synthase
Probab=95.29 E-value=0.45 Score=43.52 Aligned_cols=110 Identities=16% Similarity=0.222 Sum_probs=69.5
Q ss_pred HhcCCCCCCeEEEE-CCCHHHHHHHHHHHHcCCCeEEEec--CChhHHHHHHHcCCCEeeccCCCC--------------
Q 020928 130 RRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVSTDI-------------- 192 (319)
Q Consensus 130 ~~~~~~~~~~vlI~-G~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~~g~~~v~~~~~~~-------------- 192 (319)
+.+.+++|.+.+|. -+|+.|++....++.+|++.++++. .++++.+.++.+|+..+.. ....
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v-~~~~~~~~a~~~A~ela~ 245 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLT-DPAKGMTGAVQKAEEILK 245 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEE-CCCCChHHHHHHHHHHHh
Confidence 34667888666665 4799999999999999997666653 4667888999999866532 1100
Q ss_pred -------------cchh-----HHHHHhhhhcCCCccEEEEccCChHHHHHHHHhhc---CCCEEEEec
Q 020928 193 -------------EDVD-----TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR---PGGKVCLIG 240 (319)
Q Consensus 193 -------------~~~~-----~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~---~~G~~v~~g 240 (319)
+... ..-.++.++.+..+|+++-.+|+..++..+.+.++ |+=+++.+.
T Consensus 246 ~~~g~~~~~qy~Np~n~~ah~~ttg~EI~eq~~~~~D~vV~~vGtGGtisGiar~lKe~~P~vkVigVe 314 (429)
T PLN03013 246 NTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVE 314 (429)
T ss_pred hcCCeEeCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCccHHHHHHHHHHHhhCCCCEEEEEE
Confidence 0000 00013333333468888888888766666666554 333565554
No 342
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.58 Score=40.58 Aligned_cols=105 Identities=17% Similarity=0.170 Sum_probs=58.8
Q ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChh-HHH----HHHHcCCCE-eeccCC-CCcchhHHHHHhhhhc
Q 020928 135 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RLS----IARNLGADE-TAKVST-DIEDVDTDVGKIQNAM 206 (319)
Q Consensus 135 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~~----~~~~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~ 206 (319)
-++.++||.| +|.+|..++..+...|+ .|+.+.++++ ..+ .++..+... .+..+- +..+....+.++.+..
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3467899998 59999999987777898 5666655432 111 222223221 121121 1222223333333322
Q ss_pred CCCccEEEEccCCh--------------------------HHHHHHHHhhcCCCEEEEecc
Q 020928 207 GSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 207 ~~~~d~v~d~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~ 241 (319)
+++|++|.+.|.. ...+.+.+.+.+.|+++.++.
T Consensus 123 -~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS 182 (290)
T PRK06701 123 -GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS 182 (290)
T ss_pred -CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 4689999988741 012333445566789988875
No 343
>PRK03612 spermidine synthase; Provisional
Probab=95.29 E-value=0.21 Score=47.28 Aligned_cols=102 Identities=15% Similarity=0.142 Sum_probs=63.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcC-CCEe----ec---cCCCCcchhHHHHHhhhh
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-ADET----AK---VSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g-~~~v----~~---~~~~~~~~~~~i~~~~~~ 205 (319)
.+++++||++|+|. |..+..+++.-...++.+++.+++-.+.+++.. .... .+ .+-...|..+.++ .
T Consensus 295 ~~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~----~ 369 (521)
T PRK03612 295 SARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLR----K 369 (521)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHH----h
Confidence 35678999998765 667777777545468999999999999988721 1100 00 0001122222222 2
Q ss_pred cCCCccEEEEccCCh-----------HHHHHHHHhhcCCCEEEEec
Q 020928 206 MGSGIDVSFDCVGFD-----------KTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 206 ~~~~~d~v~d~~g~~-----------~~~~~~~~~l~~~G~~v~~g 240 (319)
....+|+|+-....+ +.++.+.+.|+++|.++.-.
T Consensus 370 ~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 370 LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 345899987544321 35678889999999987643
No 344
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.29 E-value=0.2 Score=42.35 Aligned_cols=82 Identities=20% Similarity=0.240 Sum_probs=49.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChh--HHHHHHHcCCCE-eeccC-CCCcchhHHHHHhhhhcCCCc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~~g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~~~ 210 (319)
+++++||+| ++++|.++++.+...|+ +|+.+++++. ..+.+++.+... .+..+ .+.++....+.++.+.. +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM-GHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc-CCC
Confidence 468899998 69999999998888999 5666665432 223334444321 12112 22233334444443322 469
Q ss_pred cEEEEccCC
Q 020928 211 DVSFDCVGF 219 (319)
Q Consensus 211 d~v~d~~g~ 219 (319)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999874
No 345
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.29 E-value=0.23 Score=42.14 Aligned_cols=82 Identities=16% Similarity=0.283 Sum_probs=48.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHH----HHHcCCCEe-eccCCCC-cchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADET-AKVSTDI-EDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~v-~~~~~~~-~~~~~~i~~~~~~~~~ 208 (319)
++.++||+| +|.+|..+++.+...|. .|+.+++++++.+. +++.+.... +..+-.+ ......+..+... -+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER-FG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 467899998 59999999998888898 57777777654432 223343221 1112111 1222222333222 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|++|.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998875
No 346
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.28 E-value=0.16 Score=44.41 Aligned_cols=108 Identities=16% Similarity=0.192 Sum_probs=67.6
Q ss_pred HHHHHHHHhcCCCCCCeEEEECCCHHHHHHHHHHH-HcCCCeEEEecCChhHHH-HHHHcCCCEeeccCCCCcchhHHHH
Q 020928 123 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVG 200 (319)
Q Consensus 123 ~~a~~~l~~~~~~~~~~vlI~G~g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~i~ 200 (319)
+.+..+.+...-+...+++|+|+|..|...+..+. ..+.+.|.+.++++++.+ +++++.... +... ..+..+.+
T Consensus 111 A~sala~~~La~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~-~~~~--~~~~~~av- 186 (304)
T PRK07340 111 AVSLLAARTLAPAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALG-PTAE--PLDGEAIP- 186 (304)
T ss_pred HHHHHHHHHhCCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC-CeeE--ECCHHHHh-
Confidence 33333444433356689999999999988888765 478878999999887755 444443211 0000 01111111
Q ss_pred HhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEecccC
Q 020928 201 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 201 ~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 243 (319)
.+.|+|+.|..+...+-.. .++++-.+..+|...
T Consensus 187 -------~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~ 220 (304)
T PRK07340 187 -------EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFT 220 (304)
T ss_pred -------hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCC
Confidence 3789999998876433222 478888888888644
No 347
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.28 E-value=0.19 Score=42.59 Aligned_cols=81 Identities=11% Similarity=0.199 Sum_probs=48.0
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-H----cCCCEe--eccCCC-CcchhHHHHHhhhhcC
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-N----LGADET--AKVSTD-IEDVDTDVGKIQNAMG 207 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~----~g~~~v--~~~~~~-~~~~~~~i~~~~~~~~ 207 (319)
++++||.| +|.+|..++..+...|+ .|+.++++.++.+.+. + .+...+ +..+-. .++....+.++.+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~- 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF- 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 46899998 59999999988888898 6778877765543322 1 121122 222221 122222333333322
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+.+|.++++.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 478999999874
No 348
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.26 E-value=0.78 Score=37.98 Aligned_cols=96 Identities=20% Similarity=0.181 Sum_probs=57.0
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCCh----------hHHHHHHHcCCCEeeccCCCCcchhHHHHHhhh
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV----------QRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~----------~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~ 204 (319)
-.+.+|+|.|.|.+|..+++++...|.+.|.+.+.+. +..+..++.+.... +.. .+... -..+.
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~--~~~--~~~~~-~~~l~- 94 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSAR--VKV--QDYFP-GEAIL- 94 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccc--cCc--ccccC-cccce-
Confidence 3578999999999999999999999986666667666 56665555442211 110 00000 00111
Q ss_pred hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEec
Q 020928 205 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 205 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g 240 (319)
..++|+++-|..+...-......++ .+++.-+
T Consensus 95 --~~~~DVlipaA~~~~i~~~~a~~l~--a~~V~e~ 126 (217)
T cd05211 95 --GLDVDIFAPCALGNVIDLENAKKLK--AKVVAEG 126 (217)
T ss_pred --eccccEEeeccccCccChhhHhhcC--ccEEEeC
Confidence 2368888888876533333333333 4455444
No 349
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.26 E-value=0.2 Score=43.00 Aligned_cols=81 Identities=17% Similarity=0.237 Sum_probs=48.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc---CCC-EeeccCCC-CcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GAD-ETAKVSTD-IEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~-~v~~~~~~-~~~~~~~i~~~~~~~~~ 208 (319)
.+.+++|.| +|.+|..++..+...|. .|+.+++++++.+.+ +++ +.. ..+..+-. ..+....+.++.+. -+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-FG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 467899998 59999999998888898 677777776544332 222 221 11111211 12222333333322 24
Q ss_pred CccEEEEccC
Q 020928 209 GIDVSFDCVG 218 (319)
Q Consensus 209 ~~d~v~d~~g 218 (319)
.+|++|.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 350
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.47 Score=40.80 Aligned_cols=100 Identities=21% Similarity=0.325 Sum_probs=57.4
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc---CCCE-eeccCC-CCcchhHHHHHhhhhcCCCc
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVST-DIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~~~ 210 (319)
+++++|.|+|++|..++..+. .|. .|+.+++++++.+.+ +++ +... .+..+- +.++....+..+ +. .+++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~-~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QT-LGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hh-cCCC
Confidence 357788898999998888774 787 677777776654332 222 3221 122221 222333333333 22 2479
Q ss_pred cEEEEccCChH------------------HHHHHHHhhcCCCEEEEec
Q 020928 211 DVSFDCVGFDK------------------TMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 211 d~v~d~~g~~~------------------~~~~~~~~l~~~G~~v~~g 240 (319)
|++|++.|... ..+.+.+.+..+|+++.++
T Consensus 78 d~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~is 125 (275)
T PRK06940 78 TGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIA 125 (275)
T ss_pred CEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEE
Confidence 99999998521 1334445566667766655
No 351
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.24 E-value=0.31 Score=41.88 Aligned_cols=114 Identities=15% Similarity=0.191 Sum_probs=65.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHH-HHHHcCCCE-eeccCCCCcchhHHHHHhhhhcCCCcc
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~~g~~~-v~~~~~~~~~~~~~i~~~~~~~~~~~d 211 (319)
..++++++|+|+|++|.+++..+...|. .+.+.++++++.+ +++++.... +... .. ... ....+|
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~----~~~---~~~~~D 180 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SM----DEL---PLHRVD 180 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----ch----hhh---cccCcc
Confidence 3457889999999999999988888897 7888888876654 334333210 1100 00 001 123689
Q ss_pred EEEEccCChH--HH---HHHHHhhcCCCEEEEecccCCcccccchHHHhcCcEEE
Q 020928 212 VSFDCVGFDK--TM---STALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVI 261 (319)
Q Consensus 212 ~v~d~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 261 (319)
+||+|++..- .. ......++++..++.+...+... ........++.++.
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-~ll~~A~~~G~~~v 234 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-PFLAEAKSLGTKTI 234 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-HHHHHHHHCCCeee
Confidence 9999998630 01 11234567777777665433332 22333444555544
No 352
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.23 E-value=0.23 Score=42.17 Aligned_cols=82 Identities=20% Similarity=0.291 Sum_probs=50.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCE-eeccCCC-CcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTD-IEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-v~~~~~~-~~~~~~~i~~~~~~~~~ 208 (319)
++.++||.| +|.+|..+++.+...|+ .|+.++++.++.+.+.+ .+... .+..+-. .++....+.++.+.. .
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~-~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF-G 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 467899998 69999999998888898 67888887766554432 22211 1211211 222223333333322 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|.+|.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 353
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.22 E-value=0.22 Score=42.18 Aligned_cols=82 Identities=15% Similarity=0.171 Sum_probs=49.8
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-c---CCC-EeeccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L---GAD-ETAKVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~---g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
.+.++||.| +|.+|..++..+...|. .|+.+++++++.+.+.+ + +.. ..+..+- +.++....+.+..+.. +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-G 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-C
Confidence 567899998 59999999998888998 68888777765443322 2 221 1121111 2223333333333322 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999998874
No 354
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.22 Score=42.66 Aligned_cols=82 Identities=18% Similarity=0.249 Sum_probs=48.5
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcC----CCE--eeccCC-CCcchhHHHHHhhhhc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG----ADE--TAKVST-DIEDVDTDVGKIQNAM 206 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g----~~~--v~~~~~-~~~~~~~~i~~~~~~~ 206 (319)
++.++||.| +|.+|..+++.+...|+ .|+.+++++++.+.. +++. ... .+..+- +.++....+.+..+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW- 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence 367999998 59999999998888898 677777776554322 2221 111 111111 112222233333222
Q ss_pred CCCccEEEEccCC
Q 020928 207 GSGIDVSFDCVGF 219 (319)
Q Consensus 207 ~~~~d~v~d~~g~ 219 (319)
.+++|++|.+.|.
T Consensus 84 ~~~~d~li~~ag~ 96 (276)
T PRK05875 84 HGRLHGVVHCAGG 96 (276)
T ss_pred cCCCCEEEECCCc
Confidence 2468999998873
No 355
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.21 E-value=0.23 Score=41.93 Aligned_cols=82 Identities=27% Similarity=0.481 Sum_probs=49.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc---CCC-EeeccCCC-CcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GAD-ETAKVSTD-IEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~-~v~~~~~~-~~~~~~~i~~~~~~~~~ 208 (319)
.++++||+| +|.+|..+++.+...|+ .|+.+++++++.+.+ .++ +.. ..+..+-. ..++...+..+.+. .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD-IG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh-cC
Confidence 467899998 59999999998888898 677787776554322 222 221 11222222 22223333333322 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 69999999984
No 356
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.19 E-value=0.38 Score=42.38 Aligned_cols=90 Identities=20% Similarity=0.327 Sum_probs=61.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEE-E
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS-F 214 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v-~ 214 (319)
.|.++.|+|.|.+|++..+.++.+|. +|+..++++. .+..++.++..+ + +.++. ...|++ +
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~----l~ell----~~sDii~l 206 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------D----LDELL----AESDIISL 206 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------c----HHHHH----HhCCEEEE
Confidence 47899999999999999999999998 7888877765 444445554332 1 22222 245666 4
Q ss_pred EccCChHHH----HHHHHhhcCCCEEEEecccC
Q 020928 215 DCVGFDKTM----STALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 215 d~~g~~~~~----~~~~~~l~~~G~~v~~g~~~ 243 (319)
.|-.+++.. ...++.|++++.+|.++...
T Consensus 207 ~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~ 239 (324)
T COG1052 207 HCPLTPETRHLINAEELAKMKPGAILVNTARGG 239 (324)
T ss_pred eCCCChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence 444444322 34677899999999887544
No 357
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=95.18 E-value=0.42 Score=44.05 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=62.7
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH----HcCCCE-eeccCCCCcchhHHHHHhhh
Q 020928 130 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 130 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~i~~~~~ 204 (319)
...+.+++++||=+|+|+ |-.++++++..+..+|++++.++++.+.++ .+|... +........... ...
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~----~~~- 305 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPS----QWA- 305 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccccc----ccc-
Confidence 446788999999888765 555556666665337999999999876654 356542 111111110000 000
Q ss_pred hcCCCccEEE-E--ccCC-------------------------hHHHHHHHHhhcCCCEEEEe
Q 020928 205 AMGSGIDVSF-D--CVGF-------------------------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 205 ~~~~~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 239 (319)
....+|.|| | |.|. ...+..+++.|++||+++..
T Consensus 306 -~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvys 367 (426)
T TIGR00563 306 -ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYA 367 (426)
T ss_pred -cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 134699986 3 3432 13567788899999998854
No 358
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.25 Score=42.02 Aligned_cols=82 Identities=20% Similarity=0.266 Sum_probs=49.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc---CCCE-eeccC-CCCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~---g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~~ 209 (319)
.+.+++|+| +|.+|..++..+...|+ .|+.++++++..+.++++ +... .+..+ .+..+....+..+.+. .+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 467899998 69999999998888898 688887776544443332 3221 11111 1122223333333332 246
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999999884
No 359
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.15 E-value=0.77 Score=39.26 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=30.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
.+.+|+|+|+|++|..++..+-+.|+.++..+|..
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 44689999999999999999999998888888643
No 360
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.15 E-value=0.2 Score=38.00 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=28.2
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecC
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 169 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~ 169 (319)
..+|+|.|+|++|..++..+.+.|+..+..+|.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~ 34 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDD 34 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCC
Confidence 468999999999999999888889988888864
No 361
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.14 E-value=0.25 Score=41.49 Aligned_cols=82 Identities=21% Similarity=0.304 Sum_probs=48.7
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH----HcCCC-EeeccCCCC-cchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGAD-ETAKVSTDI-EDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~v~~~~~~~-~~~~~~i~~~~~~~~~ 208 (319)
++.++||+| +|.+|..++..+...|. .|+.++++.++.+.+. +.+.. ..+..+-.+ ++....+..+.+. -.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-LG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 467899998 59999999998888898 6777777665544332 22221 122222211 1222233333322 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|++|.+.|.
T Consensus 80 ~~d~vi~~ag~ 90 (250)
T TIGR03206 80 PVDVLVNNAGW 90 (250)
T ss_pred CCCEEEECCCC
Confidence 68999999973
No 362
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.13 E-value=0.34 Score=43.05 Aligned_cols=34 Identities=32% Similarity=0.525 Sum_probs=29.8
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
+.+|+|+|+|++|..++..+.+.|+..+..+|..
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 3679999999999999999999999888888765
No 363
>PLN02253 xanthoxin dehydrogenase
Probab=95.12 E-value=0.22 Score=42.82 Aligned_cols=82 Identities=18% Similarity=0.234 Sum_probs=49.0
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHH-HHHHcCC---CEeeccC-CCCcchhHHHHHhhhhcCCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA---DETAKVS-TDIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~~g~---~~v~~~~-~~~~~~~~~i~~~~~~~~~~ 209 (319)
.+.++||.| +|.+|.++++.+...|+ .|+.++++++..+ ..++++. ...+..+ .+.++..+.+..+.+.. ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF-GT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence 367899998 69999999987777898 6777777655433 3333321 1111111 12223333334443332 46
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|++|++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 364
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.11 E-value=0.36 Score=39.82 Aligned_cols=35 Identities=26% Similarity=0.369 Sum_probs=30.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
...+|+|.|+|++|..+++.+.+.|..++..+|..
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34689999999999999998889999888888765
No 365
>PRK11761 cysM cysteine synthase B; Provisional
Probab=95.10 E-value=1.2 Score=38.94 Aligned_cols=58 Identities=21% Similarity=0.289 Sum_probs=45.1
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEec--CChhHHHHHHHcCCCEee
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETA 186 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~~g~~~v~ 186 (319)
.+...+.++++|+...+|+.|+++...|+.+|.+.++++. .++++.+.++.+|+..+.
T Consensus 55 ~~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~ 114 (296)
T PRK11761 55 EKRGEIKPGDTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELIL 114 (296)
T ss_pred HHcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEE
Confidence 3445667788876666899999999999999997666664 356788899999987654
No 366
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.08 Score=44.83 Aligned_cols=76 Identities=18% Similarity=0.250 Sum_probs=46.3
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCC-EeeccCCCCcchhHHHHHhhhhcCCCc
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~i~~~~~~~~~~~ 210 (319)
+.++||+| +|.+|..+++.+...|+ .|+++.+++.+.+.+++ .+.. .++..+- .+. ..+.+.. ..++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~~---~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDL--TDA-IDRAQAA---EWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC--CCH-HHHHHHh---cCCC
Confidence 45799998 59999999999888998 67777776665444332 2221 1111111 111 1222222 3479
Q ss_pred cEEEEccCC
Q 020928 211 DVSFDCVGF 219 (319)
Q Consensus 211 d~v~d~~g~ 219 (319)
|++|.+.|.
T Consensus 75 d~vi~~ag~ 83 (257)
T PRK09291 75 DVLLNNAGI 83 (257)
T ss_pred CEEEECCCc
Confidence 999999873
No 367
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.51 Score=39.77 Aligned_cols=82 Identities=22% Similarity=0.301 Sum_probs=46.5
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEE-ecCChhHHH-HHHHc---CCC-EeeccC-CCCcchhHHHHHhhhhc--
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIII-TDVDVQRLS-IARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAM-- 206 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~-v~~~~~~~~-~~~~~---g~~-~v~~~~-~~~~~~~~~i~~~~~~~-- 206 (319)
+.+++|.| +|.+|..+++.+...|. +|++ ..++.++.+ .++++ +.. ..+..+ .+.+++...++++.+..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 57899998 69999999998877898 4544 456555433 22222 211 112111 12223333333333221
Q ss_pred ---CCCccEEEEccCC
Q 020928 207 ---GSGIDVSFDCVGF 219 (319)
Q Consensus 207 ---~~~~d~v~d~~g~ 219 (319)
..++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 1368999999875
No 368
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.09 E-value=0.34 Score=43.10 Aligned_cols=34 Identities=29% Similarity=0.509 Sum_probs=30.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
..+|+|+|+|++|..+++.+.+.|...+..+|..
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4689999999999999999889999888888764
No 369
>PRK09242 tropinone reductase; Provisional
Probab=95.08 E-value=0.28 Score=41.56 Aligned_cols=82 Identities=23% Similarity=0.311 Sum_probs=50.0
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-Hc-----CCCE-eeccC-CCCcchhHHHHHhhhhc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL-----GADE-TAKVS-TDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~~-----g~~~-v~~~~-~~~~~~~~~i~~~~~~~ 206 (319)
.+++++|.| +|.+|..++..+...|+ .|+.+++++++.+.+. ++ +... .+..+ .+.++....+.++.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467899998 59999999998888898 6777777776544332 22 2111 11111 11223333333333322
Q ss_pred CCCccEEEEccCC
Q 020928 207 GSGIDVSFDCVGF 219 (319)
Q Consensus 207 ~~~~d~v~d~~g~ 219 (319)
+++|+++.+.|.
T Consensus 87 -g~id~li~~ag~ 98 (257)
T PRK09242 87 -DGLHILVNNAGG 98 (257)
T ss_pred -CCCCEEEECCCC
Confidence 479999999985
No 370
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.08 E-value=0.26 Score=41.72 Aligned_cols=82 Identities=13% Similarity=0.215 Sum_probs=48.8
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChh--HHHHHHHcCCC-EeeccC-CCCcchhHHHHHhhhhcCCCc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~~g~~-~v~~~~-~~~~~~~~~i~~~~~~~~~~~ 210 (319)
.+.++||.| +|.+|.++++.+...|+ .|+.+++.+. ..+.+++.+.. ..+..+ .+.++....+.++.+.. +.+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF-GHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCC
Confidence 367899998 69999999998888898 5666655432 22333334421 111222 12223333444444332 479
Q ss_pred cEEEEccCC
Q 020928 211 DVSFDCVGF 219 (319)
Q Consensus 211 d~v~d~~g~ 219 (319)
|+++++.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999885
No 371
>PLN02476 O-methyltransferase
Probab=95.07 E-value=0.35 Score=41.56 Aligned_cols=105 Identities=16% Similarity=0.205 Sum_probs=67.3
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhhc
Q 020928 132 ANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 132 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~~ 206 (319)
.+..+.++||-+|++. |..++.+|+.++- .++++++.+++..+.+++ .|..+-+.+ ...+..+.+.++....
T Consensus 114 ~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~l--i~GdA~e~L~~l~~~~ 190 (278)
T PLN02476 114 VQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNV--KHGLAAESLKSMIQNG 190 (278)
T ss_pred HHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEcCHHHHHHHHHhcc
Confidence 5567789999998644 6677778876532 268999999988777654 554432222 1234455555543221
Q ss_pred -CCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEe
Q 020928 207 -GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 207 -~~~~d~v~d~~g~---~~~~~~~~~~l~~~G~~v~~ 239 (319)
...||.||--..- ...+..+++.|+++|.++.=
T Consensus 191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D 227 (278)
T PLN02476 191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD 227 (278)
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 3579998643332 23577888999999987753
No 372
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.05 E-value=0.16 Score=41.61 Aligned_cols=106 Identities=25% Similarity=0.310 Sum_probs=68.6
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhhc
Q 020928 132 ANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 132 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~~ 206 (319)
.+..+.++||-+|++. |..++.+|+.+.- .++++++.++++.+.+++ .|...-+.+ ...+..+.+.++....
T Consensus 41 ~~~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~--~~gda~~~l~~l~~~~ 117 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEV--IEGDALEVLPELANDG 117 (205)
T ss_dssp HHHHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEE--EES-HHHHHHHHHHTT
T ss_pred HHhcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEE--EEeccHhhHHHHHhcc
Confidence 4456678999999765 8888899987631 289999999988777754 453322221 1235555666665422
Q ss_pred -CCCccEEE-EccCCh--HHHHHHHHhhcCCCEEEEec
Q 020928 207 -GSGIDVSF-DCVGFD--KTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 207 -~~~~d~v~-d~~g~~--~~~~~~~~~l~~~G~~v~~g 240 (319)
.+.||.|| |+.=.. ..+..++++|+++|.++.=.
T Consensus 118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN 155 (205)
T PF01596_consen 118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN 155 (205)
T ss_dssp TTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred CCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence 24799985 443321 35677889999999887543
No 373
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=95.03 E-value=0.54 Score=43.33 Aligned_cols=102 Identities=16% Similarity=0.246 Sum_probs=62.8
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHcC-CCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhh
Q 020928 131 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 131 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~ 205 (319)
..++++|++||=.|+|+ |-.+++++...+ -..|++++.++++.+.+++ +|...+..... |... +...
T Consensus 232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~---Da~~-l~~~--- 303 (431)
T PRK14903 232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIA---DAER-LTEY--- 303 (431)
T ss_pred HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEEC---chhh-hhhh---
Confidence 46788999988888766 556666777652 2379999999999887754 56543221111 1111 1111
Q ss_pred cCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEec
Q 020928 206 MGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 206 ~~~~~d~v~d---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g 240 (319)
....||.|+- |+|.. ..+..+++.|+++|+++...
T Consensus 304 ~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 366 (431)
T PRK14903 304 VQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYST 366 (431)
T ss_pred hhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 1346899863 33221 13567888999999986543
No 374
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.03 E-value=0.3 Score=38.89 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=28.4
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCCh
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 171 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~ 171 (319)
+|+|+|+|++|..+++.+.+.|...+..+|...
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 589999999999999988889998788887654
No 375
>PLN02928 oxidoreductase family protein
Probab=95.02 E-value=0.54 Score=42.00 Aligned_cols=101 Identities=18% Similarity=0.260 Sum_probs=60.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCC--CEeeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
.|.++.|+|.|.+|..+++.++.+|. +|++.+++..+... ..++. ..+-.+...... ...+.++. ...|+|
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~L~ell----~~aDiV 230 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGG-HEDIYEFA----GEADIV 230 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCc-ccCHHHHH----hhCCEE
Confidence 47899999999999999999999999 78888776332111 11110 000000000000 11222232 257899
Q ss_pred EEccCChHH-----HHHHHHhhcCCCEEEEecccC
Q 020928 214 FDCVGFDKT-----MSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 214 ~d~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~ 243 (319)
+-+...... -...+..|+++..+|.++...
T Consensus 231 vl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~ 265 (347)
T PLN02928 231 VLCCTLTKETAGIVNDEFLSSMKKGALLVNIARGG 265 (347)
T ss_pred EECCCCChHhhcccCHHHHhcCCCCeEEEECCCcc
Confidence 887764321 245778999999999887543
No 376
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.02 E-value=0.32 Score=40.96 Aligned_cols=32 Identities=25% Similarity=0.397 Sum_probs=28.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEecC
Q 020928 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 169 (319)
Q Consensus 138 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~ 169 (319)
.+|+|.|+|++|..+++.+.+.|+.++..+|.
T Consensus 25 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~ 56 (240)
T TIGR02355 25 SRVLIVGLGGLGCAASQYLAAAGVGNLTLLDF 56 (240)
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCEEEEEeC
Confidence 68999999999999999999999988888864
No 377
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.00 E-value=0.25 Score=43.18 Aligned_cols=82 Identities=16% Similarity=0.256 Sum_probs=48.0
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc----CCCE--eeccCC-CCcchhHHHHHhhhhc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADE--TAKVST-DIEDVDTDVGKIQNAM 206 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~----g~~~--v~~~~~-~~~~~~~~i~~~~~~~ 206 (319)
.+.+++|.| +|.+|..+++.+...|+ .|+.+.++.++.+.+ +++ +... .+..+- +.++....+.++.+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~- 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA- 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh-
Confidence 567899998 59999999987777898 677777776554322 221 1111 111121 122222333333322
Q ss_pred CCCccEEEEccCC
Q 020928 207 GSGIDVSFDCVGF 219 (319)
Q Consensus 207 ~~~~d~v~d~~g~ 219 (319)
-+++|++|.+.|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 2469999999874
No 378
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.99 E-value=0.31 Score=41.24 Aligned_cols=81 Identities=23% Similarity=0.338 Sum_probs=50.1
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCCC-EeeccC-CCCcchhHHHHHhhhhcCCCccE
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~-~v~~~~-~~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
+.++||.| +|.+|..+++.+...|. +|+.++++.++.+.+.+ ++.. ..+..+ .+..+....+.++.+. ...+|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 57899998 59999999998888898 68888887776554433 3321 111111 1222333333333332 246899
Q ss_pred EEEccCC
Q 020928 213 SFDCVGF 219 (319)
Q Consensus 213 v~d~~g~ 219 (319)
++.+.|.
T Consensus 84 li~~ag~ 90 (257)
T PRK07067 84 LFNNAAL 90 (257)
T ss_pred EEECCCc
Confidence 9998874
No 379
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.28 Score=42.25 Aligned_cols=82 Identities=29% Similarity=0.361 Sum_probs=49.0
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHc---CCCE-eeccC-CCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~---g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~ 208 (319)
.++++||+| +|++|..++..+...|+ .|+.+++++++.+.+ +++ +... .+..+ .+..+....+.++.+. .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL-LG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH-cC
Confidence 467899998 69999999998888899 577777766554422 222 3221 11111 1122233333333332 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|++|++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 68999999884
No 380
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=94.99 E-value=0.41 Score=44.24 Aligned_cols=104 Identities=19% Similarity=0.292 Sum_probs=62.3
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHcC-CCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhh
Q 020928 131 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 131 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~ 205 (319)
..+.++|++||=.|+|+ |-.+.++++..+ ...|++++.++++.+.+++ +|...+..... |... +......
T Consensus 247 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~---D~~~-~~~~~~~ 321 (434)
T PRK14901 247 LLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAA---DSRN-LLELKPQ 321 (434)
T ss_pred HhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeC---Chhh-ccccccc
Confidence 45788899998887665 545556666653 2279999999988776654 66554322211 1111 1000000
Q ss_pred cCCCccEEE-E--ccCC-------------------------hHHHHHHHHhhcCCCEEEEe
Q 020928 206 MGSGIDVSF-D--CVGF-------------------------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 206 ~~~~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 239 (319)
....||.|+ | |.|. .+.+..+++.|+++|+++..
T Consensus 322 ~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys 383 (434)
T PRK14901 322 WRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA 383 (434)
T ss_pred ccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 124689986 4 3331 13477788899999998754
No 381
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.22 Score=42.08 Aligned_cols=78 Identities=22% Similarity=0.201 Sum_probs=47.5
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCC-EeeccC-CCCcchhHHHHHhhhhcCCCccE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~v~~~~-~~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
.++++||+| +|.+|..+++.+...|. .|+.+++++++ +..+.. ..+..+ .+.++....+..+.+. .+.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 468899998 69999999998888898 67777776654 112211 111111 1122333333333332 246899
Q ss_pred EEEccCC
Q 020928 213 SFDCVGF 219 (319)
Q Consensus 213 v~d~~g~ 219 (319)
+|.+.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9999874
No 382
>PRK06720 hypothetical protein; Provisional
Probab=94.97 E-value=0.47 Score=37.62 Aligned_cols=82 Identities=27% Similarity=0.329 Sum_probs=48.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-H---HcCCCE-eeccCCC-CcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVSTD-IEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~-v~~~~~~-~~~~~~~i~~~~~~~~~ 208 (319)
++..++|.| ++++|......+...|+ .|+.++++++..+.. + +.+... .+..+-. .+++...+.++.+. -+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~-~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA-FS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 467889998 58899999888778898 677777776544322 2 223221 2222211 12223333333332 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|+++++.|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 68999998874
No 383
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.95 E-value=0.62 Score=39.21 Aligned_cols=77 Identities=21% Similarity=0.229 Sum_probs=45.8
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCC-EeeccCC-CCcchhHHHHHhhhhcCCCccE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVST-DIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
+++++||+| +|.+|..++..+...|. +|+.++++. .+..+.. ..+..+- +.+++...+.++.+. ...+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAE-TGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 357899998 59999999998888898 677776654 1222211 1111111 122333333333322 246899
Q ss_pred EEEccCC
Q 020928 213 SFDCVGF 219 (319)
Q Consensus 213 v~d~~g~ 219 (319)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9999885
No 384
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=94.94 E-value=0.29 Score=40.60 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=29.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecC
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 169 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~ 169 (319)
+...|+|+|.|++|..++..+-+.|+.++..+|-
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~ 62 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDM 62 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEec
Confidence 4578999999999999999998899987777753
No 385
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.31 Score=41.26 Aligned_cols=82 Identities=13% Similarity=0.238 Sum_probs=48.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChh-H-HHHHH---HcCCCE-eeccCC-CCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-R-LSIAR---NLGADE-TAKVST-DIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~-~-~~~~~---~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~ 207 (319)
++.++||+| ++.+|..+++.+...|+ .|+.++++++ . .+..+ ..+... .+..+- +.++....+.++.+. .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE-L 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 467899998 69999999998888998 6666766532 2 22222 233221 122121 222333334443332 2
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+.+|++|++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 468999999985
No 386
>PRK06181 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.34 Score=41.12 Aligned_cols=80 Identities=21% Similarity=0.320 Sum_probs=47.5
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-H---HcCCCE-eeccCC-CCcchhHHHHHhhhhcCCCc
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVST-DIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~~~ 210 (319)
.++||.| +|.+|..+++.+...|. .|+.+++++++.+.+ + ..+... .+..+- +.+.....+..+.+. -+++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~i 79 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGGI 79 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence 5789998 59999999998888898 688888876554322 2 223221 111111 112222233333222 2468
Q ss_pred cEEEEccCC
Q 020928 211 DVSFDCVGF 219 (319)
Q Consensus 211 d~v~d~~g~ 219 (319)
|++|.+.|.
T Consensus 80 d~vi~~ag~ 88 (263)
T PRK06181 80 DILVNNAGI 88 (263)
T ss_pred CEEEECCCc
Confidence 999999874
No 387
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=94.87 E-value=1.4 Score=38.29 Aligned_cols=58 Identities=19% Similarity=0.239 Sum_probs=44.3
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecC--ChhHHHHHHHcCCCEee
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV--DVQRLSIARNLGADETA 186 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~v~ 186 (319)
.+...+.++++|+...+|+.|+++...|+.+|.+.++++.. ++.+.+.++.+|+..+.
T Consensus 51 ~~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~ 110 (290)
T TIGR01138 51 EKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELIL 110 (290)
T ss_pred HHcCCCCCCCEEEEECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEE
Confidence 34466677777766668999999999999999976666543 46788889999986653
No 388
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.85 E-value=0.53 Score=36.02 Aligned_cols=32 Identities=28% Similarity=0.474 Sum_probs=27.8
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
+|+|.|+|++|..++..+.+.|..++..+|..
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999888888654
No 389
>PRK07904 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.25 Score=41.87 Aligned_cols=83 Identities=19% Similarity=0.323 Sum_probs=48.5
Q ss_pred CCCCCeEEEEC-CCHHHHHHHHHHHHc-CCCeEEEecCChhH-HH-HHH---HcCCC--EeeccCC-CCcchhHHHHHhh
Q 020928 134 VGPETNVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQR-LS-IAR---NLGAD--ETAKVST-DIEDVDTDVGKIQ 203 (319)
Q Consensus 134 ~~~~~~vlI~G-~g~vG~~ai~la~~~-g~~~vv~v~~~~~~-~~-~~~---~~g~~--~v~~~~~-~~~~~~~~i~~~~ 203 (319)
+..+.++||+| +|++|..+++-+... |+ .|+.+++++++ .+ ..+ +.+.. ..+..+- +.++....++++.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 55678999998 599999988865555 47 67777776553 22 223 33321 2222222 2223333344444
Q ss_pred hhcCCCccEEEEccCC
Q 020928 204 NAMGSGIDVSFDCVGF 219 (319)
Q Consensus 204 ~~~~~~~d~v~d~~g~ 219 (319)
+ .+++|+++.+.|.
T Consensus 84 ~--~g~id~li~~ag~ 97 (253)
T PRK07904 84 A--GGDVDVAIVAFGL 97 (253)
T ss_pred h--cCCCCEEEEeeec
Confidence 3 2579999887765
No 390
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.31 Score=41.90 Aligned_cols=80 Identities=18% Similarity=0.234 Sum_probs=48.0
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCC---CEeeccCC-CCcchhHHHHHhhhhcC
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGA---DETAKVST-DIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~---~~v~~~~~-~~~~~~~~i~~~~~~~~ 207 (319)
+.++||+| +|.+|..++..+...|+ .|+++++++++.+.+.+ .+. ...+..+- +.+++.. +.++.+. -
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~-~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE-I 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh-c
Confidence 56789998 59999999998888898 67777777665443322 221 11121121 2222223 3333332 2
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 478999999874
No 391
>PRK06482 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.33 Score=41.63 Aligned_cols=80 Identities=23% Similarity=0.180 Sum_probs=48.8
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCCC-EeeccCC-CCcchhHHHHHhhhhcCCCccEE
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD-ETAKVST-DIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
.++||+| +|.+|..+++.+...|. .|+++.+++++.+.+++ .+.. ..+..+- +.++....+.++.+. ..++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAA-LGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 5789998 69999999988778898 67888888776665544 2221 1111111 112222333333322 2468999
Q ss_pred EEccCC
Q 020928 214 FDCVGF 219 (319)
Q Consensus 214 ~d~~g~ 219 (319)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 999874
No 392
>PRK08328 hypothetical protein; Provisional
Probab=94.83 E-value=0.53 Score=39.40 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=29.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecC
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 169 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~ 169 (319)
+.+|+|+|+|++|..++..+.+.|+.++..+|.
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~ 59 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE 59 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 468999999999999999999999988888864
No 393
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.83 E-value=0.22 Score=42.87 Aligned_cols=83 Identities=16% Similarity=0.222 Sum_probs=56.3
Q ss_pred HHhcCC-CCCCeEEEECCCH-HHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhc
Q 020928 129 CRRANV-GPETNVMIMGSGP-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 129 l~~~~~-~~~~~vlI~G~g~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~ 206 (319)
++..++ -.|.+++|+|.|. +|..+..++...|+ .|.+..+... .+.+..
T Consensus 149 l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~-------------------------~l~~~~--- 199 (286)
T PRK14175 149 LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK-------------------------DMASYL--- 199 (286)
T ss_pred HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch-------------------------hHHHHH---
Confidence 344433 3689999999755 99999999999998 4555533210 111111
Q ss_pred CCCccEEEEccCChHHHHHHHHhhcCCCEEEEecccC
Q 020928 207 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 207 ~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 243 (319)
..+|+||.++|.+..+.. +.++++..++.+|...
T Consensus 200 -~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 200 -KDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred -hhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 358999999998755443 4688888888888643
No 394
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.37 Score=40.52 Aligned_cols=81 Identities=20% Similarity=0.270 Sum_probs=48.3
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-c-----CCC-EeeccCC-CCcchhHHHHHhhhhcC
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L-----GAD-ETAKVST-DIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~-----g~~-~v~~~~~-~~~~~~~~i~~~~~~~~ 207 (319)
+.+++|+| +|.+|...++.+...|. .|+.+++++++.+.+.+ + +.. ..+..+- +.++....+.++.+. -
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDE-L 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 46899998 69999988887777787 67777777766544322 1 111 1111121 222333334444332 2
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+++|++|.+.|.
T Consensus 80 ~~id~vi~~ag~ 91 (248)
T PRK08251 80 GGLDRVIVNAGI 91 (248)
T ss_pred CCCCEEEECCCc
Confidence 469999998873
No 395
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=94.80 E-value=0.1 Score=45.17 Aligned_cols=44 Identities=27% Similarity=0.363 Sum_probs=37.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 178 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~ 178 (319)
..+.+++|+|+|++|.+++..+...|++++.++++++++.+.+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 35678999999999999999999999988999999887766543
No 396
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=94.80 E-value=0.87 Score=39.75 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=34.9
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA 182 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~ 182 (319)
+|.|+|.|.+|.....-+...|. .|++.++++++.+.+.+.+.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 57889999999988877777887 67888999988887776553
No 397
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.79 E-value=0.3 Score=41.59 Aligned_cols=82 Identities=22% Similarity=0.336 Sum_probs=47.1
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHcCCCeEEEecCC---hhHHH-HHHHcCCCEeeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVD---VQRLS-IARNLGADETAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~---~~~~~-~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
.++++||.|+ +++|.++.+.+...|+ +|+.+.+. +++.+ +.++++....+..+ .+.++....+..+.+..
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW- 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh-
Confidence 4678999983 5899998888777898 56555432 22222 22334432222222 22233444444444333
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+.+|+++++.|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999998864
No 398
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.77 E-value=0.65 Score=38.85 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=29.3
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
..+|+|+|+|++|..++..+-+.|+..+..+|..
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3589999999999999998888999888888653
No 399
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.74 E-value=0.94 Score=37.79 Aligned_cols=82 Identities=20% Similarity=0.294 Sum_probs=44.7
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChh-HH-HHHH---HcCCCE-eeccCCC-CcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RL-SIAR---NLGADE-TAKVSTD-IEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~-~~-~~~~---~~g~~~-v~~~~~~-~~~~~~~i~~~~~~~~ 207 (319)
.+.++||.| +|.+|..++..+...|++ |+++.++.. +. +... ..+... .+..+-. .++....+.++.+. -
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE-F 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 346899998 699999999988888984 544444332 22 2222 222221 1111211 12222233333322 2
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
.++|.+|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 468999998874
No 400
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.74 E-value=0.37 Score=40.79 Aligned_cols=82 Identities=13% Similarity=0.214 Sum_probs=49.1
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH----HcCCC-EeeccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGAD-ETAKVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
.+.++||.| ++.+|..++..+...|+ .++.+++++++.+.+. +.+.. ..+..+- +.++....+..+.+. -+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK-LG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 368999998 69999999998888898 5777777666544332 22321 1122221 222233333333332 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 401
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=94.74 E-value=0.21 Score=34.71 Aligned_cols=86 Identities=22% Similarity=0.352 Sum_probs=52.8
Q ss_pred EECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeecc-CCCCcchhHHHHHhhhhcCCCccEEEEccCC-
Q 020928 142 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV-STDIEDVDTDVGKIQNAMGSGIDVSFDCVGF- 219 (319)
Q Consensus 142 I~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~-~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g~- 219 (319)
-+|+|. |..+..+++. +...+++++.+++..+.+++.....-..+ ..+..+ + .-.++.+|.|+....-
T Consensus 2 diG~G~-G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~~~-------l-~~~~~sfD~v~~~~~~~ 71 (95)
T PF08241_consen 2 DIGCGT-GRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDAED-------L-PFPDNSFDVVFSNSVLH 71 (95)
T ss_dssp EET-TT-SHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBTTS-------S-SS-TT-EEEEEEESHGG
T ss_pred EecCcC-CHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehHHh-------C-cccccccccccccccee
Confidence 357664 8888889888 44489999999998888887543221111 011111 1 0124568888754332
Q ss_pred -----hHHHHHHHHhhcCCCEEE
Q 020928 220 -----DKTMSTALNATRPGGKVC 237 (319)
Q Consensus 220 -----~~~~~~~~~~l~~~G~~v 237 (319)
...+.++.+.|+++|+++
T Consensus 72 ~~~~~~~~l~e~~rvLk~gG~l~ 94 (95)
T PF08241_consen 72 HLEDPEAALREIYRVLKPGGRLV 94 (95)
T ss_dssp GSSHHHHHHHHHHHHEEEEEEEE
T ss_pred eccCHHHHHHHHHHHcCcCeEEe
Confidence 135788999999999886
No 402
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.73 E-value=0.18 Score=49.18 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=29.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
.+.+|+|+|+|+.|++++..++..|+ .|++++..
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~ 359 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRH 359 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecC
Confidence 57899999999999999999999998 57777654
No 403
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.72 E-value=0.4 Score=36.00 Aligned_cols=92 Identities=15% Similarity=0.253 Sum_probs=55.3
Q ss_pred EEEEC-CCHHHHHHHHHHHHcC--CCeEEEecCChh---HHHHHHHcCCCEeeccCCCCcchhHHHH-------------
Q 020928 140 VMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQ---RLSIARNLGADETAKVSTDIEDVDTDVG------------- 200 (319)
Q Consensus 140 vlI~G-~g~vG~~ai~la~~~g--~~~vv~v~~~~~---~~~~~~~~g~~~v~~~~~~~~~~~~~i~------------- 200 (319)
|.|.| +|++|..++++.+... + .|++.....+ -.+.++++....+...+. +....++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence 56789 5999999999999887 5 5665544333 234556677777665332 1111121
Q ss_pred -------HhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 020928 201 -------KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC 237 (319)
Q Consensus 201 -------~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v 237 (319)
++.. ..++|+++.++.+-.-+.-.+..++.+-++-
T Consensus 77 ~G~~~l~~~~~--~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia 118 (129)
T PF02670_consen 77 SGPEGLEELAE--EPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA 118 (129)
T ss_dssp ESHHHHHHHHT--HTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred eChHHHHHHhc--CCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence 2221 2568999888888767777777887665554
No 404
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.71 E-value=0.71 Score=33.90 Aligned_cols=85 Identities=22% Similarity=0.251 Sum_probs=55.9
Q ss_pred eEEEECCCHHHHHHHHHHHHc--CCCeEEEecCChhHHHH-HHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 139 NVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSI-ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
++.|+|+|.+|..-..-++.. +...+.+.+.++++.+. .++++.. . |. + +.++.+ ..++|+|+-
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~----~----~~~ll~--~~~~D~V~I 68 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YT----D----LEELLA--DEDVDAVII 68 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ES----S----HHHHHH--HTTESEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hh----H----HHHHHH--hhcCCEEEE
Confidence 578999999998877655544 45334456777766665 4557765 2 21 2 223332 237999999
Q ss_pred ccCChHHHHHHHHhhcCCCEE
Q 020928 216 CVGFDKTMSTALNATRPGGKV 236 (319)
Q Consensus 216 ~~g~~~~~~~~~~~l~~~G~~ 236 (319)
++........+..++..+-.+
T Consensus 69 ~tp~~~h~~~~~~~l~~g~~v 89 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAGKHV 89 (120)
T ss_dssp ESSGGGHHHHHHHHHHTTSEE
T ss_pred ecCCcchHHHHHHHHHcCCEE
Confidence 999887777777777776643
No 405
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.71 E-value=0.39 Score=41.19 Aligned_cols=81 Identities=22% Similarity=0.210 Sum_probs=49.4
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCCC-EeeccCC-CCcchhHHHHHhhhhcCCCccE
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD-ETAKVST-DIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
+.++||+| +|.+|..+++.+...|. .|+.+++++++.+.+.+ ++.. ..+..+- +.++....+.++.+. -.++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEH-FGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 46799998 69999999888877898 68888887776554443 2211 1111111 122222333333322 247899
Q ss_pred EEEccCC
Q 020928 213 SFDCVGF 219 (319)
Q Consensus 213 v~d~~g~ 219 (319)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999885
No 406
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.70 E-value=0.29 Score=40.92 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=29.0
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecC
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 169 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~ 169 (319)
..+|+|.|+|++|..++..+.+.|...+..+|.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 468999999999999999999999988888753
No 407
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.68 E-value=1.1 Score=37.63 Aligned_cols=104 Identities=14% Similarity=0.192 Sum_probs=57.9
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhH-HH---HHHHcCCCE-eeccCC-CCcchhHHHHHhhhhcCCC
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LS---IARNLGADE-TAKVST-DIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~-~~---~~~~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~~ 209 (319)
+.++||.| +|.+|..++.-+...|++.++...++.+. .+ .+++.+... .+..+- +..+....+.++.+.. ..
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY-GV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc-CC
Confidence 57899998 59999998887778898533333333222 22 223333221 111111 1222223333333322 47
Q ss_pred ccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEecc
Q 020928 210 IDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 210 ~d~v~d~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
+|.+|.+.|.. + ..+.+.+.++..|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS 141 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIAS 141 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcc
Confidence 89999999841 0 13344556677789998875
No 408
>PRK12743 oxidoreductase; Provisional
Probab=94.67 E-value=0.36 Score=40.92 Aligned_cols=81 Identities=21% Similarity=0.264 Sum_probs=46.4
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEe-cCChhHHHH----HHHcCCC-EeeccC-CCCcchhHHHHHhhhhcCC
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSI----ARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~----~~~~g~~-~v~~~~-~~~~~~~~~i~~~~~~~~~ 208 (319)
++++||+| +|.+|..+++.+...|+ .|+.+ .++.++.+. +++.+.. ..+..+ .+.++....+.++.+.. +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 46899998 59999999998888999 45554 344443322 2233432 122122 12222333333343322 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 409
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=94.66 E-value=0.4 Score=42.25 Aligned_cols=102 Identities=22% Similarity=0.249 Sum_probs=59.8
Q ss_pred eEEEECCCHHHHHHHHHHHHcC----CCeEEEecC--ChhHHHHHHHcCCCEe------------eccCCCCcchh--HH
Q 020928 139 NVMIMGSGPIGLVTLLAARAFG----APRIIITDV--DVQRLSIARNLGADET------------AKVSTDIEDVD--TD 198 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g----~~~vv~v~~--~~~~~~~~~~~g~~~v------------~~~~~~~~~~~--~~ 198 (319)
+|.|.|.|.+|..+++.+...+ + .++.+.. +.+....+-+++..+- +.++...-.+. ..
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999877653 5 4555533 2333444444332110 00000000000 01
Q ss_pred HHHhhhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEeccc
Q 020928 199 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 242 (319)
Q Consensus 199 i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 242 (319)
..++.+ ...++|+||+|.|.......+..++..|++.+.++.+
T Consensus 80 p~~~~w-~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 80 PEALPW-RALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhhccc-cccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 111111 2358999999999876677788899999888888754
No 410
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.66 E-value=0.33 Score=40.78 Aligned_cols=82 Identities=18% Similarity=0.265 Sum_probs=46.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEE-ecCCh-hHHHHHH---HcCCCEe-eccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIII-TDVDV-QRLSIAR---NLGADET-AKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~-v~~~~-~~~~~~~---~~g~~~v-~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
++.+++|+| +|.+|..+++.+...|++ ++. ..+.+ ...+.++ +.+.... +..+ .+.++....+.++.+..
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFK-VVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV- 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCE-EEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence 357889998 699999999988888984 544 33333 2223333 2343322 1111 12223333333333322
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+++|+++++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 479999999985
No 411
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.65 E-value=0.34 Score=40.73 Aligned_cols=83 Identities=17% Similarity=0.204 Sum_probs=47.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHH-H---HHHcCCCE-eeccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-I---ARNLGADE-TAKVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~---~~~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
++.++||.| +|.+|..++..+...|.+.++...++.++.+ . +++.+... .+..+- +.++....+.++.+.. +
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-G 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 357899998 5999999999888889843433455554432 2 22233322 121221 2223333333343322 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 412
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.64 E-value=0.34 Score=40.66 Aligned_cols=41 Identities=24% Similarity=0.246 Sum_probs=32.2
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN 179 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~ 179 (319)
.+++|.| +|++|..++..+...|+ .|+.+++++++.+.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~ 43 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHT 43 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence 4688998 69999988887777898 68888888877665554
No 413
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.63 E-value=0.39 Score=40.72 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=48.7
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-c----CCC-EeeccCCCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L----GAD-ETAKVSTDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~----g~~-~v~~~~~~~~~~~~~i~~~~~~~~~ 208 (319)
.+.+++|.| ++++|..+++.+...|+ .|+.+++++++.+.+.+ + +.. ..+..+-. + .+.+.++.+.. +
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~--~-~~~~~~~~~~~-g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLS--S-PEAREQLAAEA-G 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC--C-HHHHHHHHHHh-C
Confidence 368999998 59999999998888899 78888887765543222 2 221 12221211 1 12333333322 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|.+|.+.|.
T Consensus 81 ~id~lv~~ag~ 91 (259)
T PRK06125 81 DIDILVNNAGA 91 (259)
T ss_pred CCCEEEECCCC
Confidence 69999999875
No 414
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.63 E-value=0.21 Score=43.18 Aligned_cols=82 Identities=15% Similarity=0.194 Sum_probs=55.7
Q ss_pred HHhcC-CCCCCeEEEECCCH-HHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhc
Q 020928 129 CRRAN-VGPETNVMIMGSGP-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 129 l~~~~-~~~~~~vlI~G~g~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~ 206 (319)
++..+ --.|.+++|+|.|. +|..+.+++...|+ .|.+..+... + +.+..
T Consensus 150 L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~--~-----------------------L~~~~--- 200 (283)
T PRK14192 150 LKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ--N-----------------------LPELV--- 200 (283)
T ss_pred HHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch--h-----------------------HHHHh---
Confidence 34433 35788999999876 99999999999998 6666543110 0 11111
Q ss_pred CCCccEEEEccCChHHHHHHHHhhcCCCEEEEeccc
Q 020928 207 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 242 (319)
Q Consensus 207 ~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 242 (319)
..+|++++++|.+..+ -.+.++++..++.++..
T Consensus 201 -~~aDIvI~AtG~~~~v--~~~~lk~gavViDvg~n 233 (283)
T PRK14192 201 -KQADIIVGAVGKPELI--KKDWIKQGAVVVDAGFH 233 (283)
T ss_pred -ccCCEEEEccCCCCcC--CHHHcCCCCEEEEEEEe
Confidence 3689999999876432 23568888888888754
No 415
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=94.61 E-value=0.66 Score=36.47 Aligned_cols=89 Identities=18% Similarity=0.262 Sum_probs=56.7
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
+|.++|.|.+|...+.-+...|+ .|.+.++++++.+.+.+.|+..+- + ..++. ...|+||-++.
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~~-------s----~~e~~----~~~dvvi~~v~ 66 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVAD-------S----PAEAA----EQADVVILCVP 66 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEES-------S----HHHHH----HHBSEEEE-SS
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhhh-------h----hhhHh----hcccceEeecc
Confidence 68889999999998888888898 788899999998888877743321 1 11122 13589998888
Q ss_pred ChHHHHHH------HHhhcCCCEEEEecccC
Q 020928 219 FDKTMSTA------LNATRPGGKVCLIGLAK 243 (319)
Q Consensus 219 ~~~~~~~~------~~~l~~~G~~v~~g~~~ 243 (319)
........ ...+.++..++.++...
T Consensus 67 ~~~~v~~v~~~~~i~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 67 DDDAVEAVLFGENILAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp SHHHHHHHHHCTTHGGGS-TTEEEEE-SS--
T ss_pred cchhhhhhhhhhHHhhccccceEEEecCCcc
Confidence 75444443 34456666777766543
No 416
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.60 E-value=0.19 Score=43.40 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=37.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR 178 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~ 178 (319)
..+++++|+|+|+.+.+++.-+...|++++.+++++.++.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34678999999999999999888899988999999888766554
No 417
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.60 E-value=0.47 Score=42.54 Aligned_cols=34 Identities=32% Similarity=0.515 Sum_probs=30.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
..+|+|+|+|++|..++..+.+.|+.++..+|..
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D 61 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDD 61 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4689999999999999999999999888888754
No 418
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.58 E-value=0.73 Score=37.64 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
..+|+|.|+|++|..+++.+.+.|...++.+|.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4689999999999999998888999778888776
No 419
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.57 E-value=0.43 Score=40.34 Aligned_cols=81 Identities=19% Similarity=0.261 Sum_probs=48.3
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCCC--EeeccCCCC-cchhHHHHHhhhhcCCCcc
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD--ETAKVSTDI-EDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~--~v~~~~~~~-~~~~~~i~~~~~~~~~~~d 211 (319)
++++||+| +|.+|...+..+...|. .|+.++++.++.+.+ +++... ..+..+-.+ ++....+.++.+.. +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAER-GPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 46899998 59999999887777898 677787777665433 333211 112222211 12222333333222 4689
Q ss_pred EEEEccCC
Q 020928 212 VSFDCVGF 219 (319)
Q Consensus 212 ~v~d~~g~ 219 (319)
.++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999974
No 420
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.55 E-value=0.39 Score=40.78 Aligned_cols=81 Identities=17% Similarity=0.174 Sum_probs=46.1
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEec-CChhHHHH-HHH----cCCC-EeeccC-CCCcchhHHHHHhhhhc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD-VDVQRLSI-ARN----LGAD-ETAKVS-TDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~-~~~~~~~~-~~~----~g~~-~v~~~~-~~~~~~~~~i~~~~~~~ 206 (319)
+++++||.| ++++|.+++..+...|++ |+.+. +++++.+. .++ .+.. ..+..+ .+.++....+.++.+.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~- 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED- 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-
Confidence 467999998 599999999988889994 55543 34443322 222 2321 122222 1222333333333332
Q ss_pred CCCccEEEEccC
Q 020928 207 GSGIDVSFDCVG 218 (319)
Q Consensus 207 ~~~~d~v~d~~g 218 (319)
-+.+|+++++.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 246899999885
No 421
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.54 E-value=0.3 Score=38.64 Aligned_cols=78 Identities=14% Similarity=0.201 Sum_probs=52.0
Q ss_pred CCCCCeEEEECCCH-HHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccE
Q 020928 134 VGPETNVMIMGSGP-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 134 ~~~~~~vlI~G~g~-vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~ 212 (319)
--.+.+++|+|+|. +|..++..++..|+ .|.++.++.+ + +.+.. ..+|+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------~----l~~~l----~~aDi 90 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------N----LKEHT----KQADI 90 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------h----HHHHH----hhCCE
Confidence 45789999999986 59989999988998 5666655421 1 11111 35899
Q ss_pred EEEccCChHHHHHHHHhhcCCCEEEEecccC
Q 020928 213 SFDCVGFDKTMSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 213 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 243 (319)
||.+++.+.. ...+.++++-.++.++.+.
T Consensus 91 VIsat~~~~i--i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 91 VIVAVGKPGL--VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred EEEcCCCCce--ecHHHccCCeEEEEccCCC
Confidence 9999998642 2223566666667776543
No 422
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.53 E-value=0.28 Score=41.58 Aligned_cols=76 Identities=18% Similarity=0.228 Sum_probs=45.7
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCC-CEeeccCCC-CcchhHHHHHhhhhcCCCccE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-DETAKVSTD-IEDVDTDVGKIQNAMGSGIDV 212 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~-~~v~~~~~~-~~~~~~~i~~~~~~~~~~~d~ 212 (319)
++.++||.| +|.+|..+++.+...|+ .|+.++++++.. .+. ...+..+-. .++....+.++.+. .+++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLER-LGGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 468899998 59999999998888898 677777765431 111 111111111 12222233333332 346999
Q ss_pred EEEccC
Q 020928 213 SFDCVG 218 (319)
Q Consensus 213 v~d~~g 218 (319)
+|++.|
T Consensus 81 vi~~ag 86 (260)
T PRK06523 81 LVHVLG 86 (260)
T ss_pred EEECCc
Confidence 999987
No 423
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.51 E-value=0.93 Score=40.19 Aligned_cols=88 Identities=19% Similarity=0.163 Sum_probs=59.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.|.+|.|+|.|.+|..+.+.++..|. .|++.+++++..... . .+. .+ +.++. ...|+|+-
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~----~~~---~~----l~ell----~~aDiVil 204 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L----TYK---DS----VKEAI----KDADIISL 204 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h----hcc---CC----HHHHH----hcCCEEEE
Confidence 45689999999999999999999998 788888776542210 0 010 01 22222 35789888
Q ss_pred ccCChH-----HHHHHHHhhcCCCEEEEecccC
Q 020928 216 CVGFDK-----TMSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 216 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~~ 243 (319)
++.... .....+..|+++..++.++...
T Consensus 205 ~lP~t~~t~~li~~~~l~~mk~gavlIN~aRG~ 237 (330)
T PRK12480 205 HVPANKESYHLFDKAMFDHVKKGAILVNAARGA 237 (330)
T ss_pred eCCCcHHHHHHHhHHHHhcCCCCcEEEEcCCcc
Confidence 887642 2235667888999888887543
No 424
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.48 E-value=0.11 Score=38.89 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=47.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEe-cCChhHHHHHHH-cCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 138 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v-~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
-+|-|+|+|.+|......++..|. .|..+ .++.++.+.+.. ++...+.++ .++ -...|++|=
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~-----------~~~----~~~aDlv~i 74 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDL-----------EEI----LRDADLVFI 74 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----T-----------TGG----GCC-SEEEE
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccc-----------ccc----cccCCEEEE
Confidence 478899999999999999999998 56665 455555555544 333222211 111 246899999
Q ss_pred ccCChHHHHHHHHhhcCC
Q 020928 216 CVGFDKTMSTALNATRPG 233 (319)
Q Consensus 216 ~~g~~~~~~~~~~~l~~~ 233 (319)
++..+ .+...++.|...
T Consensus 75 avpDd-aI~~va~~La~~ 91 (127)
T PF10727_consen 75 AVPDD-AIAEVAEQLAQY 91 (127)
T ss_dssp -S-CC-HHHHHHHHHHCC
T ss_pred EechH-HHHHHHHHHHHh
Confidence 99976 667777766544
No 425
>PRK08264 short chain dehydrogenase; Validated
Probab=94.47 E-value=0.32 Score=40.57 Aligned_cols=77 Identities=19% Similarity=0.274 Sum_probs=47.1
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCC-EeeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
.+.+++|+| +|.+|..+++.+...|.++|+.++++.++.+. .+.. ..+..+-. + .+.+.++.+.. ..+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~--~-~~~~~~~~~~~-~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVT--D-PASVAAAAEAA-SDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCC--C-HHHHHHHHHhc-CCCCEE
Confidence 457899997 69999999998888898567777776655432 2211 11111111 1 12233333322 358999
Q ss_pred EEccCC
Q 020928 214 FDCVGF 219 (319)
Q Consensus 214 ~d~~g~ 219 (319)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999886
No 426
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.47 E-value=0.54 Score=39.74 Aligned_cols=82 Identities=21% Similarity=0.336 Sum_probs=50.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCC-EeeccC-CCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~-~v~~~~-~~~~~~~~~i~~~~~~~~~ 208 (319)
++.+++|.| +|.+|..++..+...|+ .|+.+++++++.+.+ ++.+.. ..+..+ .+.++....+.++.... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH-G 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc-C
Confidence 478899998 59999999987777898 688887876553322 223321 122111 22223333444443323 3
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|.+|.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998885
No 427
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.46 E-value=0.51 Score=39.64 Aligned_cols=85 Identities=15% Similarity=0.237 Sum_probs=51.1
Q ss_pred CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCCE--ee--ccCC-CCcchhHHHHHh
Q 020928 133 NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE--TA--KVST-DIEDVDTDVGKI 202 (319)
Q Consensus 133 ~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~--v~--~~~~-~~~~~~~~i~~~ 202 (319)
+..++.+++|.| +|.+|...++.+...|+ .|+.++++.++.+.+ ++.+... .+ +++. ...+..+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 345788999998 69999999988777898 677787776553322 2223221 11 2211 122333333334
Q ss_pred hhhcCCCccEEEEccCC
Q 020928 203 QNAMGSGIDVSFDCVGF 219 (319)
Q Consensus 203 ~~~~~~~~d~v~d~~g~ 219 (319)
.+. ...+|.+|.+.|.
T Consensus 87 ~~~-~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQ-FGRLDGVLHNAGL 102 (247)
T ss_pred HHH-hCCCCEEEECCcc
Confidence 332 2469999988764
No 428
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.45 E-value=0.51 Score=39.43 Aligned_cols=82 Identities=22% Similarity=0.293 Sum_probs=48.8
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCCC-EeeccCC-CCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD-ETAKVST-DIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~~~d 211 (319)
++.++||.| +|.+|..++..+...|. .|+..+++.++.+.+ ..++.. ..+..+- +.++....+.++.+. -.++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEAD-LEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 467899998 59999999988888898 676666666555433 333321 1121111 122222233333322 24699
Q ss_pred EEEEccCC
Q 020928 212 VSFDCVGF 219 (319)
Q Consensus 212 ~v~d~~g~ 219 (319)
.+|.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999884
No 429
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.42 E-value=0.86 Score=38.58 Aligned_cols=96 Identities=20% Similarity=0.298 Sum_probs=62.0
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCC-EeeccCCCCcchhHHHHHhhhhcCCCc
Q 020928 132 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 132 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~i~~~~~~~~~~~ 210 (319)
....++.+||-+|+|. |..+..+++ .|. .++++|.+++..+.+++.... ..+.- |. ..+. .....+
T Consensus 38 l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~-----d~----~~~~-~~~~~f 104 (251)
T PRK10258 38 LPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAG-----DI----ESLP-LATATF 104 (251)
T ss_pred cCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEc-----Cc----ccCc-CCCCcE
Confidence 3344678899999876 766666665 465 799999999988888775321 11111 11 1111 123469
Q ss_pred cEEEEccCC------hHHHHHHHHhhcCCCEEEEec
Q 020928 211 DVSFDCVGF------DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 211 d~v~d~~g~------~~~~~~~~~~l~~~G~~v~~g 240 (319)
|+|+....- ...+..+.+.|+++|.++...
T Consensus 105 D~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~ 140 (251)
T PRK10258 105 DLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTT 140 (251)
T ss_pred EEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 999865431 235778888999999998764
No 430
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.41 E-value=0.6 Score=44.68 Aligned_cols=93 Identities=12% Similarity=0.107 Sum_probs=61.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEcc
Q 020928 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 217 (319)
Q Consensus 138 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~ 217 (319)
+.++|.|.|.+|+.+++.++..|. .+++++.++++.+.+++.|...+.- +..+++ .+++. .=..+|.++-++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~~~~---~L~~a---~i~~a~~viv~~ 489 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAANEE---IMQLA---HLDCARWLLLTI 489 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCCCHH---HHHhc---CccccCEEEEEc
Confidence 678999999999999999999998 6999999999999999887554432 222222 22221 234688888777
Q ss_pred CChHHH---HHHHHhhcCCCEEEE
Q 020928 218 GFDKTM---STALNATRPGGKVCL 238 (319)
Q Consensus 218 g~~~~~---~~~~~~l~~~G~~v~ 238 (319)
++++.. -.+.+...+.-+++.
T Consensus 490 ~~~~~~~~iv~~~~~~~~~~~iia 513 (558)
T PRK10669 490 PNGYEAGEIVASAREKRPDIEIIA 513 (558)
T ss_pred CChHHHHHHHHHHHHHCCCCeEEE
Confidence 664321 123344445555543
No 431
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.39 E-value=0.14 Score=44.14 Aligned_cols=115 Identities=20% Similarity=0.212 Sum_probs=67.1
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-HcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
..+.+++|+|+|++|.+++..+...|+..|.+++++.++.+.+. +++....+.+.. + ..+ .-.++|+|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~---~----~~~----~~~~~Div 189 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL---E----LQE----ELADFDLI 189 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc---c----chh----ccccCCEE
Confidence 45678999999999999999999999768999999888765543 343211011100 0 000 12468999
Q ss_pred EEccCChHH-----HHHHHHhhcCCCEEEEecccCCcccccchHHHhcCcEEE
Q 020928 214 FDCVGFDKT-----MSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVI 261 (319)
Q Consensus 214 ~d~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 261 (319)
++|+...-. .......++++..++.+--.+. .+........+++++.
T Consensus 190 InaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~-~T~ll~~A~~~G~~~~ 241 (278)
T PRK00258 190 INATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPL-PTPFLAWAKAQGARTI 241 (278)
T ss_pred EECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCC-CCHHHHHHHHCcCeec
Confidence 999875410 0112345666666665543222 2333333444455544
No 432
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.39 E-value=0.48 Score=39.90 Aligned_cols=79 Identities=19% Similarity=0.289 Sum_probs=48.8
Q ss_pred eEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCCCE-eeccC-CCCcchhHHHHHhhhhcCCCccEEE
Q 020928 139 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGIDVSF 214 (319)
Q Consensus 139 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~~~d~v~ 214 (319)
+++|.| +|.+|..++..+...|+ +|+.+++++++.+.+.. ++... .+..+ .+.++....+..+.+. .+++|.++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE-WRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEE
Confidence 588998 59999999998888898 68888888776655433 34321 11111 1122223333333322 24699999
Q ss_pred EccCC
Q 020928 215 DCVGF 219 (319)
Q Consensus 215 d~~g~ 219 (319)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98874
No 433
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=94.38 E-value=0.28 Score=45.93 Aligned_cols=101 Identities=21% Similarity=0.316 Sum_probs=64.7
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc--CCCEeeccCCCCcchhHHHHHhhhhcCC
Q 020928 131 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL--GADETAKVSTDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 131 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~--g~~~v~~~~~~~~~~~~~i~~~~~~~~~ 208 (319)
...++++.+||-+|+|. |..++.+++..+. .+++++.+++..+.+++. +....+.+.. .++. ... ....
T Consensus 261 ~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~--~d~~----~~~-~~~~ 331 (475)
T PLN02336 261 KLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEV--ADCT----KKT-YPDN 331 (475)
T ss_pred hcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEE--cCcc----cCC-CCCC
Confidence 34567888999998876 6677788888887 799999999888777652 2111011100 1110 010 0134
Q ss_pred CccEEEEccCC------hHHHHHHHHhhcCCCEEEEec
Q 020928 209 GIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 209 ~~d~v~d~~g~------~~~~~~~~~~l~~~G~~v~~g 240 (319)
.+|+|+..-.- ...+..+.+.|+|+|+++...
T Consensus 332 ~fD~I~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~ 369 (475)
T PLN02336 332 SFDVIYSRDTILHIQDKPALFRSFFKWLKPGGKVLISD 369 (475)
T ss_pred CEEEEEECCcccccCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 69999863221 246788999999999988664
No 434
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.38 E-value=0.61 Score=39.43 Aligned_cols=33 Identities=21% Similarity=0.375 Sum_probs=29.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecC
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 169 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~ 169 (319)
..+|+|+|+|++|..++..+.+.|+.++..+|.
T Consensus 32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~ 64 (245)
T PRK05690 32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDF 64 (245)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 468999999999999999999999988888864
No 435
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.38 E-value=0.42 Score=39.81 Aligned_cols=74 Identities=20% Similarity=0.278 Sum_probs=51.9
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHH-HH-HcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEc
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-AR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 216 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~-~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~ 216 (319)
+++|.|+|.+|...++.+...|. .|+.++..+++.+. +. ++....+ .-+..+++ . +.+.+-..+|+++-+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v-~gd~t~~~---~---L~~agi~~aD~vva~ 73 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVV-IGDATDED---V---LEEAGIDDADAVVAA 73 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEE-EecCCCHH---H---HHhcCCCcCCEEEEe
Confidence 57889999999999999999998 68888888888666 33 2444333 22232222 2 333345679999999
Q ss_pred cCCh
Q 020928 217 VGFD 220 (319)
Q Consensus 217 ~g~~ 220 (319)
+|.+
T Consensus 74 t~~d 77 (225)
T COG0569 74 TGND 77 (225)
T ss_pred eCCC
Confidence 9975
No 436
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.37 E-value=0.5 Score=42.49 Aligned_cols=83 Identities=16% Similarity=0.139 Sum_probs=48.0
Q ss_pred CCCCeEEEEC-CCHHHHH--HHHHHHHcCCCeEEEecCCh---h-------------HHHHHHHcCCCE-eeccCC-CCc
Q 020928 135 GPETNVMIMG-SGPIGLV--TLLAARAFGAPRIIITDVDV---Q-------------RLSIARNLGADE-TAKVST-DIE 193 (319)
Q Consensus 135 ~~~~~vlI~G-~g~vG~~--ai~la~~~g~~~vv~v~~~~---~-------------~~~~~~~~g~~~-v~~~~~-~~~ 193 (319)
..++++||+| ++++|++ +.+.+ ..|+ .+++++... + -.+.+++.|... .+..+- +.+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 4567889998 6899999 45555 7898 455554321 1 123445556432 222222 223
Q ss_pred chhHHHHHhhhhcCCCccEEEEccCCh
Q 020928 194 DVDTDVGKIQNAMGSGIDVSFDCVGFD 220 (319)
Q Consensus 194 ~~~~~i~~~~~~~~~~~d~v~d~~g~~ 220 (319)
+....+..+.+.. +++|+++++++.+
T Consensus 117 ~v~~lie~I~e~~-G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDL-GQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 3334444444433 4799999999876
No 437
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.37 E-value=0.36 Score=40.07 Aligned_cols=75 Identities=13% Similarity=0.236 Sum_probs=45.3
Q ss_pred eEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEc
Q 020928 139 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 216 (319)
Q Consensus 139 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~ 216 (319)
+++|.| +|.+|..+++.+...|. .|+.+++++++.+.+ ++++...+ ..+-.+. +.+.++.+.....+|+++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~~D~~~~---~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAI-VCDNTDP---ASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEE-ecCCCCH---HHHHHHHHHHhhcCcEEEEC
Confidence 578997 59999999998888898 677777877765543 34443322 1221111 12222222112368999988
Q ss_pred cC
Q 020928 217 VG 218 (319)
Q Consensus 217 ~g 218 (319)
.|
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 65
No 438
>PRK06484 short chain dehydrogenase; Validated
Probab=94.35 E-value=0.34 Score=45.86 Aligned_cols=82 Identities=22% Similarity=0.398 Sum_probs=52.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHH-HHHcCCCE-eeccC-CCCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~~g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~~~d 211 (319)
+++++||+| ++++|.++++.+...|+ .|+.++++.++.+. .++++... .+..+ .+.++....+.++.+.. +++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREF-GRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHh-CCCC
Confidence 567899998 59999999998888998 67777777776543 34455322 11111 22233334444443322 4799
Q ss_pred EEEEccCC
Q 020928 212 VSFDCVGF 219 (319)
Q Consensus 212 ~v~d~~g~ 219 (319)
+++++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999874
No 439
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.35 E-value=0.36 Score=46.71 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=64.1
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEc
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 216 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~ 216 (319)
..+|+|.|.|.+|+...+.++..|. .+++++.++++.+.+++.|..... -+..+.+ . +.+.+-..+|.++-+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~~~---~---L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDATRMD---L---LESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeCCCHH---H---HHhcCCCcCCEEEEE
Confidence 3579999999999999999999998 689999999999999988754332 2333222 2 222233578899988
Q ss_pred cCChHHHH---HHHHhhcCCCEEE
Q 020928 217 VGFDKTMS---TALNATRPGGKVC 237 (319)
Q Consensus 217 ~g~~~~~~---~~~~~l~~~G~~v 237 (319)
.++++.-. ...+.+.|+-+++
T Consensus 472 ~~d~~~n~~i~~~ar~~~p~~~ii 495 (621)
T PRK03562 472 IDDPQTSLQLVELVKEHFPHLQII 495 (621)
T ss_pred eCCHHHHHHHHHHHHHhCCCCeEE
Confidence 88764322 3344455555544
No 440
>PRK12367 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.35 Score=40.90 Aligned_cols=34 Identities=32% Similarity=0.342 Sum_probs=28.0
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCh
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV 171 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~ 171 (319)
+++++|+| +|++|..+++.+...|. .|+.+++++
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~ 48 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSK 48 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCc
Confidence 57899998 59999999998888898 677776665
No 441
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=94.30 E-value=0.17 Score=43.93 Aligned_cols=91 Identities=18% Similarity=0.272 Sum_probs=56.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc----CCCEeeccCCCCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d 211 (319)
++.+||-+|+|. |..++.+++. |. .|+++|.++...+.+++. +...... ..|.. ... ....+|
T Consensus 120 ~~~~vLDlGcG~-G~~~~~la~~-g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~----~~D~~----~~~--~~~~fD 186 (287)
T PRK12335 120 KPGKALDLGCGQ-GRNSLYLALL-GF-DVTAVDINQQSLENLQEIAEKENLNIRTG----LYDIN----SAS--IQEEYD 186 (287)
T ss_pred CCCCEEEeCCCC-CHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHHHHcCCceEEE----Eechh----ccc--ccCCcc
Confidence 445888898876 7777777774 76 799999999877766542 3211110 00110 010 135699
Q ss_pred EEEEccC----C----hHHHHHHHHhhcCCCEEEEe
Q 020928 212 VSFDCVG----F----DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 212 ~v~d~~g----~----~~~~~~~~~~l~~~G~~v~~ 239 (319)
+|+...- . +..+..+.+.|+++|.++.+
T Consensus 187 ~I~~~~vl~~l~~~~~~~~l~~~~~~LkpgG~~l~v 222 (287)
T PRK12335 187 FILSTVVLMFLNRERIPAIIKNMQEHTNPGGYNLIV 222 (287)
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9987532 1 23577788899999996554
No 442
>PRK07069 short chain dehydrogenase; Validated
Probab=94.30 E-value=0.78 Score=38.50 Aligned_cols=78 Identities=22% Similarity=0.343 Sum_probs=45.0
Q ss_pred eEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC-hhHHHHHH-HcC----CCEe--e--ccCCCCcchhHHHHHhhhhcC
Q 020928 139 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD-VQRLSIAR-NLG----ADET--A--KVSTDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 139 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~~~~-~~g----~~~v--~--~~~~~~~~~~~~i~~~~~~~~ 207 (319)
+++|+| +|.+|..+++.+...|+ +|+.++++ .++.+.+. ++. ...+ + |+ .+.+++...+.++.+. -
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDV-TDEAQWQALLAQAADA-M 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeec-CCHHHHHHHHHHHHHH-c
Confidence 378887 69999999888878898 67777765 44433322 221 1111 1 22 1222333333333332 2
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+++|+++.+.|.
T Consensus 78 ~~id~vi~~ag~ 89 (251)
T PRK07069 78 GGLSVLVNNAGV 89 (251)
T ss_pred CCccEEEECCCc
Confidence 468999999874
No 443
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.29 E-value=0.55 Score=39.98 Aligned_cols=82 Identities=24% Similarity=0.351 Sum_probs=48.6
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCCE-eeccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
.+.+++|.| ++.+|..++..+...|+ .++.+++++++.+.+ ++.+... .+..+- +.++....+.++.+.. +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV-G 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC-C
Confidence 467899998 59999988887778898 577777776654332 2233321 122222 1222223333333222 4
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|.++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999999885
No 444
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=94.25 E-value=0.45 Score=39.84 Aligned_cols=81 Identities=15% Similarity=0.158 Sum_probs=45.4
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHH-HH---HHcCCC-EeeccCC-CCcchhHHHHHhhhhcCCCc
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IA---RNLGAD-ETAKVST-DIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~---~~~g~~-~v~~~~~-~~~~~~~~i~~~~~~~~~~~ 210 (319)
.++||+| +|.+|..++..+...|.+.++...+++++.+ .. ++.+.. ..+..+- +.++....+.++.+ ..+++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCCC
Confidence 3789998 5999999999888889853333445554432 22 222321 1122221 12223333333332 24579
Q ss_pred cEEEEccCC
Q 020928 211 DVSFDCVGF 219 (319)
Q Consensus 211 d~v~d~~g~ 219 (319)
|.+|.+.|.
T Consensus 81 d~vi~~ag~ 89 (247)
T PRK09730 81 AALVNNAGI 89 (247)
T ss_pred CEEEECCCC
Confidence 999999985
No 445
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.25 E-value=0.23 Score=43.08 Aligned_cols=36 Identities=11% Similarity=0.119 Sum_probs=30.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCCh
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 171 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~ 171 (319)
.+.++||+|+|+.+.+++..+...|++++.++++++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567899999999999887777778998899998884
No 446
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=94.24 E-value=0.14 Score=42.50 Aligned_cols=101 Identities=19% Similarity=0.258 Sum_probs=64.3
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HHcCCCEeeccCCC------------CcchhHH
Q 020928 132 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTD------------IEDVDTD 198 (319)
Q Consensus 132 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~~g~~~v~~~~~~------------~~~~~~~ 198 (319)
...+++.+|||-|+|. |.-+..||. .|. .|++++-++...+.+ ++.+.......... ..|+-
T Consensus 33 l~~~~~~rvLvPgCG~-g~D~~~La~-~G~-~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gDfF-- 107 (218)
T PF05724_consen 33 LALKPGGRVLVPGCGK-GYDMLWLAE-QGH-DVVGVDLSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRITIYCGDFF-- 107 (218)
T ss_dssp HTTSTSEEEEETTTTT-SCHHHHHHH-TTE-EEEEEES-HHHHHHHHHHCTTEEECTTCTTEEEETTSSEEEEES-TT--
T ss_pred cCCCCCCeEEEeCCCC-hHHHHHHHH-CCC-eEEEEecCHHHHHHHHHHhccCCCcccccceeeecCCceEEEEcccc--
Confidence 5678888999988876 677777886 498 899999999888776 34443221110000 01221
Q ss_pred HHHhhhhcCCCccEEEEccCC--------hHHHHHHHHhhcCCCEEEEe
Q 020928 199 VGKIQNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 199 i~~~~~~~~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~ 239 (319)
++.....+.||.|+|...= +...+.+.++|+++|++.++
T Consensus 108 --~l~~~~~g~fD~iyDr~~l~Alpp~~R~~Ya~~l~~ll~p~g~~lLi 154 (218)
T PF05724_consen 108 --ELPPEDVGKFDLIYDRTFLCALPPEMRERYAQQLASLLKPGGRGLLI 154 (218)
T ss_dssp --TGGGSCHHSEEEEEECSSTTTS-GGGHHHHHHHHHHCEEEEEEEEEE
T ss_pred --cCChhhcCCceEEEEecccccCCHHHHHHHHHHHHHHhCCCCcEEEE
Confidence 1222122469999997543 24678888999999994443
No 447
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.24 E-value=0.72 Score=35.82 Aligned_cols=95 Identities=17% Similarity=0.212 Sum_probs=62.5
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhh-----cCCCcc
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA-----MGSGID 211 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~-----~~~~~d 211 (319)
.+|+|.| -|++|.++++.-|..+. -|..++-+++.. ..+..+++. +..|.++-+++.+. .+.++|
T Consensus 4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~---~~swtEQe~~v~~~vg~sL~gekvD 74 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDG---NKSWTEQEQSVLEQVGSSLQGEKVD 74 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecC---CcchhHHHHHHHHHHHHhhcccccc
Confidence 5788997 59999999999999998 677777654431 123333332 23454444433321 367899
Q ss_pred EEEEccCChH--------------------------HHHHHHHhhcCCCEEEEecc
Q 020928 212 VSFDCVGFDK--------------------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 212 ~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
.||.-.|+-. ....+..+|+++|-+.+.|.
T Consensus 75 av~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGA 130 (236)
T KOG4022|consen 75 AVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGA 130 (236)
T ss_pred eEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccc
Confidence 9998777631 12344568999999988875
No 448
>PRK06436 glycerate dehydrogenase; Provisional
Probab=94.23 E-value=0.61 Score=40.75 Aligned_cols=87 Identities=22% Similarity=0.207 Sum_probs=58.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.|++|.|+|.|.+|....++++.+|. +|++.+++... .+.... + . .+.++. ...|+|+-
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~~~------~~~~~~--~----~----~l~ell----~~aDiv~~ 179 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSYVN------DGISSI--Y----M----EPEDIM----KKSDFVLI 179 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcc------cCcccc--c----C----CHHHHH----hhCCEEEE
Confidence 57899999999999999999999999 78888765321 121110 0 1 122222 24788888
Q ss_pred ccCChHH-----HHHHHHhhcCCCEEEEecccC
Q 020928 216 CVGFDKT-----MSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 216 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~ 243 (319)
+....+. -...++.|+++..++.++...
T Consensus 180 ~lp~t~~T~~li~~~~l~~mk~ga~lIN~sRG~ 212 (303)
T PRK06436 180 SLPLTDETRGMINSKMLSLFRKGLAIINVARAD 212 (303)
T ss_pred CCCCCchhhcCcCHHHHhcCCCCeEEEECCCcc
Confidence 7775322 235677899999888887544
No 449
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.23 E-value=0.57 Score=39.11 Aligned_cols=82 Identities=21% Similarity=0.313 Sum_probs=48.4
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-HH---cCCCE-eeccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
.+.+++|.| +|.+|..++..+...|. .|+.+++++++.+.+ .+ .+... .+..+- +..+....++.+.+ ..+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 83 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN-ELG 83 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 357899998 69999999988778898 677787776654322 22 22211 122221 12222233333322 224
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|.+|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 78999998874
No 450
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=94.22 E-value=0.96 Score=37.22 Aligned_cols=97 Identities=20% Similarity=0.302 Sum_probs=55.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhh-cCCCcc
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA-MGSGID 211 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~-~~~~~d 211 (319)
++++++||=+|+|+ |..+..+++..+. ..|++++.++.. ...+. .++. .+-.+. ..+.++.+. ....+|
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~--~D~~~~-~~~~~i~~~~~~~~~D 119 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQ--GDFRDE-LVLKALLERVGDSKVQ 119 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEe--cCCCCh-HHHHHHHHHhCCCCCC
Confidence 68888888888766 6666667776653 379999887621 00121 1121 111111 112222221 245799
Q ss_pred EEEEcc-----CC------------hHHHHHHHHhhcCCCEEEEe
Q 020928 212 VSFDCV-----GF------------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 212 ~v~d~~-----g~------------~~~~~~~~~~l~~~G~~v~~ 239 (319)
+|+... |. ...++.+.+.|+++|+++..
T Consensus 120 ~V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~ 164 (209)
T PRK11188 120 VVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVK 164 (209)
T ss_pred EEecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 998644 21 12467788899999999874
No 451
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.20 E-value=0.57 Score=40.19 Aligned_cols=81 Identities=21% Similarity=0.255 Sum_probs=46.4
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCCE-eeccCC-CCcchhHHHHHhhhhcCCC
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVST-DIEDVDTDVGKIQNAMGSG 209 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~~ 209 (319)
..+++|+| +|.+|..+++.+...|+ +|+++.++.++.+.+ +..+... .+..+- +.++....+.++.+. -++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 87 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA-LGE 87 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh-cCC
Confidence 35789998 59999999988778898 677776665543322 2223221 111111 122222233333222 246
Q ss_pred ccEEEEccCC
Q 020928 210 IDVSFDCVGF 219 (319)
Q Consensus 210 ~d~v~d~~g~ 219 (319)
+|++|.+.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999999875
No 452
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.20 E-value=0.54 Score=39.41 Aligned_cols=82 Identities=17% Similarity=0.223 Sum_probs=47.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHH----HHHcCCCE-eeccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
.+.++||+| +|.+|..++..+...|. .|++++++.++... +++.+... .+..+- +..+....+..+.+. -.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED-FG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence 457899998 59999999988888898 67778777544332 22222211 111111 112222223233222 23
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|.+|.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998865
No 453
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.19 E-value=0.58 Score=40.96 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=27.7
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
.+.+++|.| ++++|.++++.+...|+ .|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 467899998 58999999998888998 56666665
No 454
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=94.18 E-value=1.4 Score=36.73 Aligned_cols=104 Identities=19% Similarity=0.363 Sum_probs=65.2
Q ss_pred HhcCCCCCCeEEEECCCHHHHHHHHHHHHcC-CCeEEEecCChhHHHHHHHcCCC----EeeccCCCCcchhHHHHHhhh
Q 020928 130 RRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGAD----ETAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 130 ~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~~i~~~~~ 204 (319)
+....+++.+||-+|+|. |..+..+++..+ ...+++++.+++..+.+++.-.. ..+.+.. .+... +.
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~----~~- 116 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEA----LP- 116 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--ccccc----CC-
Confidence 344566788999999887 888888888775 23799999998887777763211 1111100 01110 11
Q ss_pred hcCCCccEEEEccC------ChHHHHHHHHhhcCCCEEEEecc
Q 020928 205 AMGSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 205 ~~~~~~d~v~d~~g------~~~~~~~~~~~l~~~G~~v~~g~ 241 (319)
.....+|+|+-..+ -...+..+.+.|+++|.++.+..
T Consensus 117 ~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~ 159 (239)
T PRK00216 117 FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF 159 (239)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence 01346888864321 12467788899999999987754
No 455
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.16 E-value=0.61 Score=38.89 Aligned_cols=82 Identities=21% Similarity=0.278 Sum_probs=49.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH----HHcCCCEee-ccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETA-KVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~~g~~~v~-~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
++.++||+| +|.+|..+++.+...|. .|+.+++++++.+.+ ++.+....+ ..+- +..++...+..+... -.
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA-FG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 346899998 59999999998888898 588888877664433 223322211 1111 122233333333322 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|.++.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998865
No 456
>PF08003 Methyltransf_9: Protein of unknown function (DUF1698); InterPro: IPR010017 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (AdoMet) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalysed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. Three classes of DNA Mtases transfer the methyl group from AdoMet to the target base to form either N-6-methyladenine, or N-4-methylcytosine, or C-5- methylcytosine. In C-5-cytosine Mtases, ten conserved motifs are arranged in the same order []. Motif I (a glycine-rich or closely related consensus sequence; FAGxGG in M.HhaI []), shared by other AdoMet-Mtases [], is part of the cofactor binding site and motif IV (PCQ) is part of the catalytic site. In contrast, sequence comparison among N-6-adenine and N-4-cytosine Mtases indicated two of the conserved segments [], although more conserved segments may be present. One of them corresponds to motif I in C-5-cytosine Mtases, and the other is named (D/N/S)PP(Y/F). Crystal structures are known for a number of Mtases [, , , ]. The cofactor binding sites are almost identical and the essential catalytic amino acids coincide. The comparable protein folding and the existence of equivalent amino acids in similar secondary and tertiary positions indicate that many (if not all) AdoMet-Mtases have a common catalytic domain structure. This permits tertiary structure prediction of other DNA, RNA, protein, and small-molecule AdoMet-Mtases from their amino acid sequences []. This entry represents a set of bacterial AdoMet-dependent tRNA (mo5U34)-methyltransferases. These enzymes catalyse the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at the wobble position (34) of tRNA []. The 5-methoxyuridine is subsequently converted to uridine-5-oxyacetic acid, a modified nucleoside that is apparently necessary for the efficient decoding of G-ending Pro, Ala, and Val codons in these organisms [].; GO: 0016300 tRNA (uracil) methyltransferase activity, 0002098 tRNA wobble uridine modification
Probab=94.16 E-value=0.8 Score=39.57 Aligned_cols=91 Identities=22% Similarity=0.365 Sum_probs=60.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChh---HHHHHHH-cCCCE-eeccCCCCcchhHHHHHhhhhcCCCc
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---RLSIARN-LGADE-TAKVSTDIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~---~~~~~~~-~g~~~-v~~~~~~~~~~~~~i~~~~~~~~~~~ 210 (319)
.|.+||=+|++. |.....++++ |++.|++++.+.. +.+++++ +|.+. +... .-.+..+.. .+.|
T Consensus 115 ~gk~VLDIGC~n-GY~~frM~~~-GA~~ViGiDP~~lf~~QF~~i~~~lg~~~~~~~l-------plgvE~Lp~--~~~F 183 (315)
T PF08003_consen 115 KGKRVLDIGCNN-GYYSFRMLGR-GAKSVIGIDPSPLFYLQFEAIKHFLGQDPPVFEL-------PLGVEDLPN--LGAF 183 (315)
T ss_pred CCCEEEEecCCC-cHHHHHHhhc-CCCEEEEECCChHHHHHHHHHHHHhCCCccEEEc-------Ccchhhccc--cCCc
Confidence 578899999887 8888787775 8878999998775 3444444 33222 1111 012333332 3579
Q ss_pred cEEEEccCCh-------HHHHHHHHhhcCCCEEEE
Q 020928 211 DVSFDCVGFD-------KTMSTALNATRPGGKVCL 238 (319)
Q Consensus 211 d~v~d~~g~~-------~~~~~~~~~l~~~G~~v~ 238 (319)
|+|| |.|.- +.+..+.++|+++|.+++
T Consensus 184 DtVF-~MGVLYHrr~Pl~~L~~Lk~~L~~gGeLvL 217 (315)
T PF08003_consen 184 DTVF-SMGVLYHRRSPLDHLKQLKDSLRPGGELVL 217 (315)
T ss_pred CEEE-EeeehhccCCHHHHHHHHHHhhCCCCEEEE
Confidence 9999 55542 467788889999999884
No 457
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.13 E-value=0.47 Score=40.36 Aligned_cols=104 Identities=14% Similarity=0.195 Sum_probs=59.1
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHcCCCeEEEecCC------hhHHHHHHHcC-CCEeeccC-CCCcchhHHHHHhhh
Q 020928 136 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVD------VQRLSIARNLG-ADETAKVS-TDIEDVDTDVGKIQN 204 (319)
Q Consensus 136 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~------~~~~~~~~~~g-~~~v~~~~-~~~~~~~~~i~~~~~ 204 (319)
.+++++|.|+ +++|.+++..+...|+ +|+.+.++ ++..+.+++.+ ....+..+ .+.++....+.++.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4678999985 5899999988888999 45554322 12222222222 11122122 222233334444443
Q ss_pred hcCCCccEEEEccCCh-------H----------------------HHHHHHHhhcCCCEEEEecc
Q 020928 205 AMGSGIDVSFDCVGFD-------K----------------------TMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 205 ~~~~~~d~v~d~~g~~-------~----------------------~~~~~~~~l~~~G~~v~~g~ 241 (319)
.. +.+|+++++.|.. . ..+.+++.|+.+|+++.++.
T Consensus 84 ~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS 148 (258)
T PRK07370 84 KW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTY 148 (258)
T ss_pred Hc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEec
Confidence 33 4799999998731 0 13456667777899888764
No 458
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.11 E-value=0.56 Score=39.47 Aligned_cols=80 Identities=20% Similarity=0.334 Sum_probs=48.5
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCE-eeccC-CCCcchhHHHHHhhhhcCCCc
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI 210 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~-v~~~~-~~~~~~~~~i~~~~~~~~~~~ 210 (319)
.++||.| +|.+|..++..+...|. .|+.+++++++.+.+.+ .+... .+..+ .+.+++...+..+.+. ..++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE-FGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-cCCC
Confidence 5789998 59999999988888898 68888887766554433 22211 11111 1222333333344332 2468
Q ss_pred cEEEEccCC
Q 020928 211 DVSFDCVGF 219 (319)
Q Consensus 211 d~v~d~~g~ 219 (319)
|.+|.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999988764
No 459
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.10 E-value=0.53 Score=41.04 Aligned_cols=96 Identities=15% Similarity=0.115 Sum_probs=55.6
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
+|+|+|+|++|.+....+...|. .|..+++++++.+.+++.|... . ...............+ ...+|+||-++-
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~--~~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAE--LGPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhH--cCCCCEEEEecc
Confidence 58899999999988888777887 6777777777777776655421 0 0000000000000111 146899998887
Q ss_pred ChH---HHHHHHHhhcCCCEEEEec
Q 020928 219 FDK---TMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 219 ~~~---~~~~~~~~l~~~G~~v~~g 240 (319)
... .++.+...+.++..++.+.
T Consensus 76 ~~~~~~~~~~l~~~l~~~~~iv~~~ 100 (304)
T PRK06522 76 AYQLPAALPSLAPLLGPDTPVLFLQ 100 (304)
T ss_pred cccHHHHHHHHhhhcCCCCEEEEec
Confidence 642 2333444444555666554
No 460
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=94.09 E-value=1.2 Score=41.38 Aligned_cols=102 Identities=22% Similarity=0.308 Sum_probs=61.5
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcC-CCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhh
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ 203 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~ 203 (319)
.......++++||=+|+|+ |-.+..+++..+ ...|++++.++++.+.+++ +|...+..... |.. .+.
T Consensus 243 ~~~l~~~~g~~VLDlgaG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~---Da~----~~~ 314 (445)
T PRK14904 243 CLLLNPQPGSTVLDLCAAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEG---DAR----SFS 314 (445)
T ss_pred HHhcCCCCCCEEEEECCCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeC---ccc----ccc
Confidence 3446678899998887655 444445555432 2379999999998776654 56543221111 111 111
Q ss_pred hhcCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEec
Q 020928 204 NAMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 204 ~~~~~~~d~v~d---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g 240 (319)
....||.||- |.|.. ..+..+.+.|+++|+++...
T Consensus 315 --~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvyst 377 (445)
T PRK14904 315 --PEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYAT 377 (445)
T ss_pred --cCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 1346899863 44321 24677888999999988654
No 461
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=94.07 E-value=0.076 Score=44.92 Aligned_cols=101 Identities=17% Similarity=0.186 Sum_probs=61.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeecc-CC----CCcchhHHHHHhhhhcCC-
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV-ST----DIEDVDTDVGKIQNAMGS- 208 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~-~~----~~~~~~~~i~~~~~~~~~- 208 (319)
++.++|||+|.|. |..+-++++......+.+++-+++-.+.++++-......+ +. ...|-...+++ ...
T Consensus 75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~~Dg~~~l~~----~~~~ 149 (246)
T PF01564_consen 75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIIIGDGRKFLKE----TQEE 149 (246)
T ss_dssp SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEESTHHHHHHT----SSST
T ss_pred CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEEhhhHHHHHh----ccCC
Confidence 3789999998655 5566677777767789999999999898888431100000 00 01122222222 334
Q ss_pred CccEEE-EccC---------ChHHHHHHHHhhcCCCEEEEec
Q 020928 209 GIDVSF-DCVG---------FDKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 209 ~~d~v~-d~~g---------~~~~~~~~~~~l~~~G~~v~~g 240 (319)
.+|+|+ |... +.+.++.+.++|+++|.++.-.
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~Gv~v~~~ 191 (246)
T PF01564_consen 150 KYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPDGVLVLQA 191 (246)
T ss_dssp -EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCCcEEEEEc
Confidence 899986 4443 1357888999999999887543
No 462
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=94.07 E-value=0.57 Score=32.38 Aligned_cols=35 Identities=17% Similarity=0.317 Sum_probs=28.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecC
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 169 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~ 169 (319)
-.+.+++|+|+|.+|..+.+.+...+..++.+.++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 45688999999999999999998886556777655
No 463
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=94.06 E-value=1.2 Score=41.11 Aligned_cols=103 Identities=20% Similarity=0.256 Sum_probs=61.8
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhh
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~ 204 (319)
....+++++++||=.|+|+ |..+..+++..+...|++++.++++.+.+++ +|....+. .. |... +....
T Consensus 237 ~~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~-~~---D~~~-~~~~~- 309 (427)
T PRK10901 237 ATLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVI-VG---DARD-PAQWW- 309 (427)
T ss_pred HHHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEE-Ec---Cccc-chhhc-
Confidence 3446788999999888765 5555666666542489999999988776654 44332111 11 1110 00010
Q ss_pred hcCCCccEEE-E--ccCC-------------------------hHHHHHHHHhhcCCCEEEEe
Q 020928 205 AMGSGIDVSF-D--CVGF-------------------------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 205 ~~~~~~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 239 (319)
....+|.|+ | |.+. ...+..+.+.|++||+++..
T Consensus 310 -~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvys 371 (427)
T PRK10901 310 -DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYA 371 (427)
T ss_pred -ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 134689986 2 3321 13567788899999998754
No 464
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.06 E-value=0.57 Score=40.53 Aligned_cols=83 Identities=24% Similarity=0.398 Sum_probs=48.2
Q ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCh---------hH-HHHHHHc---CCCE-eeccC-CCCcchhHH
Q 020928 135 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV---------QR-LSIARNL---GADE-TAKVS-TDIEDVDTD 198 (319)
Q Consensus 135 ~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~---------~~-~~~~~~~---g~~~-v~~~~-~~~~~~~~~ 198 (319)
-++.++||+| ++++|.++++.+...|+ .|+.++++. ++ .+..+++ +... .+..+ .+.++....
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 3578999998 69999999988778898 566655432 22 2222322 3221 11111 222233334
Q ss_pred HHHhhhhcCCCccEEEEccCC
Q 020928 199 VGKIQNAMGSGIDVSFDCVGF 219 (319)
Q Consensus 199 i~~~~~~~~~~~d~v~d~~g~ 219 (319)
+.++.+.. +.+|++|++.|.
T Consensus 83 ~~~~~~~~-g~id~lv~nAG~ 102 (286)
T PRK07791 83 VDAAVETF-GGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHhc-CCCCEEEECCCC
Confidence 44444333 469999999885
No 465
>PLN00203 glutamyl-tRNA reductase
Probab=94.04 E-value=0.39 Score=45.22 Aligned_cols=74 Identities=15% Similarity=0.312 Sum_probs=50.5
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH-HcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
+.+|+|+|+|.+|.+++..+...|+..|+++.++.++.+.+. +++...+ .+. .+ +.+... -.+.|+||.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~----~~-~dl~~a----l~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYK----PL-DEMLAC----AAEADVVFT 335 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-Eee----cH-hhHHHH----HhcCCEEEE
Confidence 678999999999999999998899877888999888766554 4532111 110 11 111111 136899999
Q ss_pred ccCCh
Q 020928 216 CVGFD 220 (319)
Q Consensus 216 ~~g~~ 220 (319)
|++.+
T Consensus 336 AT~s~ 340 (519)
T PLN00203 336 STSSE 340 (519)
T ss_pred ccCCC
Confidence 98775
No 466
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.04 E-value=0.47 Score=43.30 Aligned_cols=38 Identities=21% Similarity=0.417 Sum_probs=30.5
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHH
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL 174 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~ 174 (319)
++++++|.| +|++|.+++..+...|. +|+++++++++.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l 215 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKI 215 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 467999998 59999999998888898 677777766554
No 467
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.01 E-value=0.62 Score=39.53 Aligned_cols=82 Identities=18% Similarity=0.340 Sum_probs=47.1
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHcCCCeEEEecCCh--hHH-HHHHHcCCC-EeeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDV--QRL-SIARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~v~~~~--~~~-~~~~~~g~~-~v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
.+++++|.|+ +++|.++.+.+...|+ +|+.++++. +.. +..++++.. ..+..+ .+.++....+.++.+. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH-V 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH-c
Confidence 4678999984 7999999988778898 577666543 322 233334321 112112 1222333333333332 2
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
+++|+++++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 579999998874
No 468
>PRK09134 short chain dehydrogenase; Provisional
Probab=94.01 E-value=0.65 Score=39.35 Aligned_cols=83 Identities=17% Similarity=0.199 Sum_probs=45.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHH-HHHH---cCCCE-eeccCC-CCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARN---LGADE-TAKVST-DIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~---~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~ 208 (319)
.+.++||.| +|.+|..++..+...|.+.++...++.++.+ ..++ .+... .+..+- +..+....+.+..+. .+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-LG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 456899998 5999999888888889843333333333332 2222 23221 111111 122222233333322 24
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|++|.+.|.
T Consensus 87 ~iD~vi~~ag~ 97 (258)
T PRK09134 87 PITLLVNNASL 97 (258)
T ss_pred CCCEEEECCcC
Confidence 79999999874
No 469
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.98 E-value=0.6 Score=40.33 Aligned_cols=87 Identities=20% Similarity=0.183 Sum_probs=54.7
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEccC
Q 020928 139 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 218 (319)
Q Consensus 139 ~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~g 218 (319)
+|.|+|.|.+|......++..|. .|.+.++++++.+.+.+.|..... .. + .. . -...|+||-|+.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~~--~----~~-~----~~~aDlVilavp 66 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---ST--D----LS-L----LKDCDLVILALP 66 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---cC--C----Hh-H----hcCCCEEEEcCC
Confidence 58889999999988888887887 788999998888888777642110 00 1 00 0 135788888877
Q ss_pred ChHH---HHHHHHhhcCCCEEEEec
Q 020928 219 FDKT---MSTALNATRPGGKVCLIG 240 (319)
Q Consensus 219 ~~~~---~~~~~~~l~~~G~~v~~g 240 (319)
.... ++.+...++++..+..++
T Consensus 67 ~~~~~~~~~~l~~~l~~~~ii~d~~ 91 (279)
T PRK07417 67 IGLLLPPSEQLIPALPPEAIVTDVG 91 (279)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEeCc
Confidence 5422 233333444444444444
No 470
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=93.97 E-value=1.7 Score=38.09 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=25.4
Q ss_pred CCCeEEEECC---CHHHHHHHHHHHHcCCCeEEE
Q 020928 136 PETNVMIMGS---GPIGLVTLLAARAFGAPRIII 166 (319)
Q Consensus 136 ~~~~vlI~G~---g~vG~~ai~la~~~g~~~vv~ 166 (319)
.|+++||+|+ .++|.++.+.+...|+ +|+.
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~ 40 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV 40 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE
Confidence 4788999986 8999999999999999 4555
No 471
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=93.93 E-value=0.81 Score=34.15 Aligned_cols=94 Identities=19% Similarity=0.159 Sum_probs=48.9
Q ss_pred eEEEECC-CHHHHHHHHHHHH-cCCCeEEEecCChhH---HHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEE
Q 020928 139 NVMIMGS-GPIGLVTLLAARA-FGAPRIIITDVDVQR---LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 213 (319)
Q Consensus 139 ~vlI~G~-g~vG~~ai~la~~-~g~~~vv~v~~~~~~---~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v 213 (319)
+|.|+|+ |-+|..+++.+.. .+...+.++++.++. .+.-+-.+.. .........+..+. ..+|++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~------~~~~~v~~~l~~~~----~~~DVv 71 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG------PLGVPVTDDLEELL----EEADVV 71 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS------T-SSBEBS-HHHHT----TH-SEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC------CcccccchhHHHhc----ccCCEE
Confidence 5889997 9999999998887 677545555555411 1111111111 00111112233332 238999
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEecccC
Q 020928 214 FDCVGFDKTMSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 214 ~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 243 (319)
+|+.. ++.....++.....|.=+.+|.++
T Consensus 72 IDfT~-p~~~~~~~~~~~~~g~~~ViGTTG 100 (124)
T PF01113_consen 72 IDFTN-PDAVYDNLEYALKHGVPLVIGTTG 100 (124)
T ss_dssp EEES--HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred EEcCC-hHHhHHHHHHHHhCCCCEEEECCC
Confidence 99885 555555555555556555555443
No 472
>PRK14968 putative methyltransferase; Provisional
Probab=93.92 E-value=0.39 Score=38.45 Aligned_cols=43 Identities=23% Similarity=0.474 Sum_probs=33.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN 179 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~ 179 (319)
..+++++|..|+|. |..+..+++. +. .+++++.+++..+.+++
T Consensus 21 ~~~~~~vLd~G~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~ 63 (188)
T PRK14968 21 DKKGDRVLEVGTGS-GIVAIVAAKN-GK-KVVGVDINPYAVECAKC 63 (188)
T ss_pred ccCCCEEEEEcccc-CHHHHHHHhh-cc-eEEEEECCHHHHHHHHH
Confidence 47788999998766 6677777777 65 79999999887776643
No 473
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.90 E-value=0.62 Score=39.78 Aligned_cols=79 Identities=23% Similarity=0.307 Sum_probs=46.1
Q ss_pred eEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH-H---HcCCCE-eeccCC-CCcchhHHHHHhhhhcCCCcc
Q 020928 139 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVST-DIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 139 ~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~~g~~~-v~~~~~-~~~~~~~~i~~~~~~~~~~~d 211 (319)
+++|+| +|.+|..++..+...|. .|+.++++.++.+.+ + ..+... .+..+- +..+....+..+... ..++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEK-WGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 688998 59999999988777898 677777776654422 2 223222 111121 112222233333222 24799
Q ss_pred EEEEccCC
Q 020928 212 VSFDCVGF 219 (319)
Q Consensus 212 ~v~d~~g~ 219 (319)
++|.+.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99999885
No 474
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.88 E-value=0.84 Score=41.30 Aligned_cols=35 Identities=31% Similarity=0.439 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
.+.+|+|+|+|++|..++..+.+.|+..+..++..
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999888888775
No 475
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=93.87 E-value=1.5 Score=40.63 Aligned_cols=101 Identities=16% Similarity=0.240 Sum_probs=61.1
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHc-CCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhh
Q 020928 131 RANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 205 (319)
Q Consensus 131 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~ 205 (319)
..+++++++||=.|+|+ |..++.+++.. +...|++++.++++.+.+++ +|...+..... |.......+
T Consensus 245 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~---D~~~~~~~~--- 317 (444)
T PRK14902 245 ALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKAL---DARKVHEKF--- 317 (444)
T ss_pred HhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeC---Ccccccchh---
Confidence 45678889988887655 55566666665 22379999999988776654 55544222111 211111111
Q ss_pred cCCCccEEEE---ccCC-------------------------hHHHHHHHHhhcCCCEEEEe
Q 020928 206 MGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI 239 (319)
Q Consensus 206 ~~~~~d~v~d---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 239 (319)
...+|.|+- |.|. .+.+..+.+.|+++|+++..
T Consensus 318 -~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys 378 (444)
T PRK14902 318 -AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS 378 (444)
T ss_pred -cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 246898863 2221 12567788899999998854
No 476
>PRK07577 short chain dehydrogenase; Provisional
Probab=93.87 E-value=0.36 Score=40.10 Aligned_cols=74 Identities=22% Similarity=0.328 Sum_probs=45.7
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccC-CCCcchhHHHHHhhhhcCCCccEEE
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVSF 214 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~-~~~~~~~~~i~~~~~~~~~~~d~v~ 214 (319)
+.++||.| +|.+|..+++.+...|. +|+.+.++.++ .... .++..+ .+.++....+.++.+ ..++|++|
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~--~~~~d~vi 73 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPG-ELFACDLADIEQTAATLAQINE--IHPVDAIV 73 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCCHHHHHHHHHHHHH--hCCCcEEE
Confidence 57899998 59999999998888898 67777776543 1111 222211 122233333444433 23689999
Q ss_pred EccCC
Q 020928 215 DCVGF 219 (319)
Q Consensus 215 d~~g~ 219 (319)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98875
No 477
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=93.86 E-value=0.83 Score=36.45 Aligned_cols=44 Identities=25% Similarity=0.373 Sum_probs=31.7
Q ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH
Q 020928 133 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN 179 (319)
Q Consensus 133 ~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~ 179 (319)
...++++||-.|+|. |..+..+++. +. .+++++.+++..+.+++
T Consensus 16 ~~~~~~~vLdlG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~ 59 (179)
T TIGR00537 16 RELKPDDVLEIGAGT-GLVAIRLKGK-GK-CILTTDINPFAVKELRE 59 (179)
T ss_pred HhcCCCeEEEeCCCh-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHH
Confidence 344567888888766 6666666664 44 79999999988777665
No 478
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=93.83 E-value=0.74 Score=38.29 Aligned_cols=104 Identities=11% Similarity=0.106 Sum_probs=64.4
Q ss_pred hcCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH-cCCCEeec-------cCC-----CCcchhH
Q 020928 131 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAK-------VST-----DIEDVDT 197 (319)
Q Consensus 131 ~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-~g~~~v~~-------~~~-----~~~~~~~ 197 (319)
.....++.+|||-|+|- |.-++.||. .|. .|++++-++...+.+.+ .+....+. +.. -..|+-
T Consensus 38 ~l~~~~~~rvLvPgCGk-g~D~~~LA~-~G~-~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f- 113 (226)
T PRK13256 38 KLNINDSSVCLIPMCGC-SIDMLFFLS-KGV-KVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIF- 113 (226)
T ss_pred hcCCCCCCeEEEeCCCC-hHHHHHHHh-CCC-cEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCc-
Confidence 34455778999999987 888888877 588 69999999988776543 32211000 000 001111
Q ss_pred HHHHhhh--hcCCCccEEEEccCC--------hHHHHHHHHhhcCCCEEEEecc
Q 020928 198 DVGKIQN--AMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 198 ~i~~~~~--~~~~~~d~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~g~ 241 (319)
++.. ...+.+|.|+|...= ....+.+.+.|+++|+++.+..
T Consensus 114 ---~l~~~~~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll~~ 164 (226)
T PRK13256 114 ---NLPKIANNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLLVM 164 (226)
T ss_pred ---CCCccccccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 1110 112468999885432 1356778889999999887764
No 479
>PRK06932 glycerate dehydrogenase; Provisional
Probab=93.83 E-value=0.35 Score=42.52 Aligned_cols=86 Identities=13% Similarity=0.146 Sum_probs=56.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEE
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 215 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d 215 (319)
.|.++.|+|.|.+|...+++++.+|. +|+..++.... .... .+ .+ +.++. ...|+|.-
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~-~V~~~~~~~~~-----~~~~----~~----~~----l~ell----~~sDiv~l 203 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGM-KVLYAEHKGAS-----VCRE----GY----TP----FEEVL----KQADIVTL 203 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCccc-----cccc----cc----CC----HHHHH----HhCCEEEE
Confidence 46899999999999999999999999 67777653211 0000 00 11 22222 24688876
Q ss_pred ccCChHH-----HHHHHHhhcCCCEEEEecccC
Q 020928 216 CVGFDKT-----MSTALNATRPGGKVCLIGLAK 243 (319)
Q Consensus 216 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~ 243 (319)
+..-... -...+..|+++..++.++...
T Consensus 204 ~~Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 236 (314)
T PRK06932 204 HCPLTETTQNLINAETLALMKPTAFLINTGRGP 236 (314)
T ss_pred cCCCChHHhcccCHHHHHhCCCCeEEEECCCcc
Confidence 6653221 245678899999999887543
No 480
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=93.80 E-value=0.5 Score=41.93 Aligned_cols=104 Identities=22% Similarity=0.281 Sum_probs=64.5
Q ss_pred HHhcCC-CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcC
Q 020928 129 CRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 129 l~~~~~-~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~ 207 (319)
++...+ .++.+||-+|+|. |..+..+++..+...+++++.+++-.+.+++.....-+.+ ...+ +..+.. ..
T Consensus 105 l~~~~l~~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~--i~gD----~e~lp~-~~ 176 (340)
T PLN02490 105 LEPADLSDRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI--IEGD----AEDLPF-PT 176 (340)
T ss_pred HhhcccCCCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeE--Eecc----HHhCCC-CC
Confidence 344444 4678898898876 7777788887654579999999888777766321110111 0111 111111 13
Q ss_pred CCccEEEEccC-----C-hHHHHHHHHhhcCCCEEEEec
Q 020928 208 SGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 208 ~~~d~v~d~~g-----~-~~~~~~~~~~l~~~G~~v~~g 240 (319)
..+|+|+.+-. . ...++.+.+.|+++|+++..+
T Consensus 177 ~sFDvVIs~~~L~~~~d~~~~L~e~~rvLkPGG~LvIi~ 215 (340)
T PLN02490 177 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIG 215 (340)
T ss_pred CceeEEEEcChhhhCCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 46898876421 1 235788999999999998765
No 481
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=93.80 E-value=2.1 Score=35.49 Aligned_cols=104 Identities=18% Similarity=0.192 Sum_probs=66.2
Q ss_pred CCCCeEEEEC-C--CHHHHHHHHHHHHcCCCeEEEecCCh----hHHHHHHHcCCCEeeccCC-CCcchhHHHHHhhhhc
Q 020928 135 GPETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDV----QRLSIARNLGADETAKVST-DIEDVDTDVGKIQNAM 206 (319)
Q Consensus 135 ~~~~~vlI~G-~--g~vG~~ai~la~~~g~~~vv~v~~~~----~~~~~~~~~g~~~v~~~~~-~~~~~~~~i~~~~~~~ 206 (319)
=.|++.||.| + -+++....+.++..|+...+.- -.+ +-.+++++++.+.++..+- ++++......++.+.
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy-~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~- 81 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTY-QGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK- 81 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEe-ccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh-
Confidence 4689999998 4 6889999999999999544433 222 2244666677766654432 233333333333332
Q ss_pred CCCccEEEEccCCh-----------------------------HHHHHHHHhhcCCCEEEEec
Q 020928 207 GSGIDVSFDCVGFD-----------------------------KTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 207 ~~~~d~v~d~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g 240 (319)
=+++|.++.+++-. +....+...|.++|.++.+.
T Consensus 82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt 144 (259)
T COG0623 82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT 144 (259)
T ss_pred hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE
Confidence 24788888877653 13456667889999888765
No 482
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.78 E-value=0.55 Score=45.30 Aligned_cols=93 Identities=15% Similarity=0.086 Sum_probs=65.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEEEEcc
Q 020928 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 217 (319)
Q Consensus 138 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v~d~~ 217 (319)
+.++|.|.|.+|+.+++.++..|. .+++++.++++.+.+++.|...+. -+..+++ .++ +.+-.++|.++-+.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~~~---~L~---~agi~~A~~vv~~~ 472 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDATQLE---LLR---AAGAEKAEAIVITC 472 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeCCCHH---HHH---hcCCccCCEEEEEe
Confidence 578999999999999999999998 699999999999999998854432 2222222 222 22345789999999
Q ss_pred CChHHHH---HHHHhhcCCCEEEE
Q 020928 218 GFDKTMS---TALNATRPGGKVCL 238 (319)
Q Consensus 218 g~~~~~~---~~~~~l~~~G~~v~ 238 (319)
++++... ...+.+.|.-+++.
T Consensus 473 ~d~~~n~~i~~~~r~~~p~~~Iia 496 (601)
T PRK03659 473 NEPEDTMKIVELCQQHFPHLHILA 496 (601)
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEE
Confidence 8864322 23445566666654
No 483
>PRK06141 ornithine cyclodeaminase; Validated
Probab=93.76 E-value=2.7 Score=37.02 Aligned_cols=101 Identities=16% Similarity=0.165 Sum_probs=61.3
Q ss_pred HHhcCCCCCCeEEEECCCHHHHHHHHH-HHHcCCCeEEEecCChhHHHH-HHHcCCC--EeeccCCCCcchhHHHHHhhh
Q 020928 129 CRRANVGPETNVMIMGSGPIGLVTLLA-ARAFGAPRIIITDVDVQRLSI-ARNLGAD--ETAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 129 l~~~~~~~~~~vlI~G~g~vG~~ai~l-a~~~g~~~vv~v~~~~~~~~~-~~~~g~~--~v~~~~~~~~~~~~~i~~~~~ 204 (319)
.+...-+...+++|+|+|..|...+.. +...+...|.+.++++++.+. ++++... .+... .+ ..+.
T Consensus 117 ~~~La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~----~~----~~~a-- 186 (314)
T PRK06141 117 ASYLARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVV----TD----LEAA-- 186 (314)
T ss_pred HHHhCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEe----CC----HHHH--
Confidence 344334567899999999999888764 444677789999998877554 4444211 11111 11 1111
Q ss_pred hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEeccc
Q 020928 205 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 242 (319)
Q Consensus 205 ~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 242 (319)
-.+.|+|+.+.+++..+ ...+.++++-.+..+|..
T Consensus 187 --v~~aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 187 --VRQADIISCATLSTEPL-VRGEWLKPGTHLDLVGNF 221 (314)
T ss_pred --HhcCCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCCC
Confidence 13689999988865221 112567887766666643
No 484
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=93.71 E-value=0.97 Score=36.82 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=29.6
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 170 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~ 170 (319)
..+|+|.|+|++|.-++..+-+.|+..+..+|..
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4689999999999999999999999888888643
No 485
>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase. In E. coli, this protein flanks the DNA repair protein MutY, also called micA.
Probab=93.69 E-value=0.63 Score=37.77 Aligned_cols=99 Identities=14% Similarity=0.136 Sum_probs=61.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhhcCCCcc
Q 020928 136 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 136 ~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d 211 (319)
....+|-+|+|. |..+..+|+...-..+++++.+++..+.+++ .+...+... ..+..+...... ....+|
T Consensus 16 ~~~~ilDiGcG~-G~~~~~la~~~p~~~v~gvD~~~~~l~~a~~~~~~~~l~ni~~i---~~d~~~~~~~~~--~~~~~d 89 (194)
T TIGR00091 16 KAPLHLEIGCGK-GRFLIDMAKQNPDKNFLGIEIHTPIVLAANNKANKLGLKNLHVL---CGDANELLDKFF--PDGSLS 89 (194)
T ss_pred CCceEEEeCCCc-cHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHhCCCCEEEE---ccCHHHHHHhhC--CCCcee
Confidence 334666689887 8888899987654479999999887665543 333222111 112222211111 123588
Q ss_pred EEEEccCC--------------hHHHHHHHHhhcCCCEEEEec
Q 020928 212 VSFDCVGF--------------DKTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 212 ~v~d~~g~--------------~~~~~~~~~~l~~~G~~v~~g 240 (319)
.++-.... ++.+..+.+.|+++|++....
T Consensus 90 ~v~~~~pdpw~k~~h~~~r~~~~~~l~~~~r~LkpgG~l~~~t 132 (194)
T TIGR00091 90 KVFLNFPDPWPKKRHNKRRITQPHFLKEYANVLKKGGVIHFKT 132 (194)
T ss_pred EEEEECCCcCCCCCccccccCCHHHHHHHHHHhCCCCEEEEEe
Confidence 88765443 246888999999999987653
No 486
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=93.67 E-value=0.7 Score=40.63 Aligned_cols=91 Identities=19% Similarity=0.178 Sum_probs=61.6
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHcCCCEeeccCCCCcchhHHHHHhhhhcCCCccEE-
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS- 213 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~~~~~~~d~v- 213 (319)
..|++|.|+|.|.+|....+-++.+| ..+.-..+.+.+.+...+.++..+ ++.+ + ....|++
T Consensus 160 ~~gK~vgilG~G~IG~~ia~rL~~Fg-~~i~y~~r~~~~~~~~~~~~~~~~--------d~~~----~----~~~sD~iv 222 (336)
T KOG0069|consen 160 LEGKTVGILGLGRIGKAIAKRLKPFG-CVILYHSRTQLPPEEAYEYYAEFV--------DIEE----L----LANSDVIV 222 (336)
T ss_pred ccCCEEEEecCcHHHHHHHHhhhhcc-ceeeeecccCCchhhHHHhccccc--------CHHH----H----HhhCCEEE
Confidence 46789999999999999999999999 567777776666666666555421 2222 2 1245665
Q ss_pred EEccCChHHH----HHHHHhhcCCCEEEEeccc
Q 020928 214 FDCVGFDKTM----STALNATRPGGKVCLIGLA 242 (319)
Q Consensus 214 ~d~~g~~~~~----~~~~~~l~~~G~~v~~g~~ 242 (319)
+.|-.++.+. ...+..|++++.++.++..
T Consensus 223 v~~pLt~~T~~liNk~~~~~mk~g~vlVN~aRG 255 (336)
T KOG0069|consen 223 VNCPLTKETRHLINKKFIEKMKDGAVLVNTARG 255 (336)
T ss_pred EecCCCHHHHHHhhHHHHHhcCCCeEEEecccc
Confidence 5555554321 2456688999999888754
No 487
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=93.65 E-value=1.3 Score=35.77 Aligned_cols=41 Identities=24% Similarity=0.504 Sum_probs=32.2
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHH
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 177 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~ 177 (319)
++.+++|+| +|.+|..++..+...|. .|+.+.++.++.+.+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l 68 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKA 68 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHH
Confidence 567899998 59999988888777887 777777877765544
No 488
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=93.65 E-value=0.65 Score=42.25 Aligned_cols=41 Identities=15% Similarity=0.267 Sum_probs=32.1
Q ss_pred cCCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhH
Q 020928 132 ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR 173 (319)
Q Consensus 132 ~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~ 173 (319)
.+-..+.+|||+| +|.+|..++..+...|. .|++++++.++
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~ 96 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSG 96 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhh
Confidence 3445677999998 59999999998888898 67777776543
No 489
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.65 E-value=0.77 Score=38.97 Aligned_cols=82 Identities=18% Similarity=0.225 Sum_probs=46.3
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC-hhHHH-H---HHHcCCCE-eeccC-CCCcchhHHHHHhhhhcC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD-VQRLS-I---ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~-~~~~~-~---~~~~g~~~-v~~~~-~~~~~~~~~i~~~~~~~~ 207 (319)
++.++||.| +|.+|..+++.+...|+ .++.+.++ ++..+ . ++..+... .+..+ .+.++....+.++.+..
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~- 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF- 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 567999998 69999999998888998 45555443 33222 2 22223211 11111 12222223333333322
Q ss_pred CCccEEEEccCC
Q 020928 208 SGIDVSFDCVGF 219 (319)
Q Consensus 208 ~~~d~v~d~~g~ 219 (319)
.++|+++.+.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 469999999885
No 490
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=93.62 E-value=0.57 Score=36.23 Aligned_cols=98 Identities=19% Similarity=0.372 Sum_probs=62.3
Q ss_pred CCCCeEEEECCCHHHHHHHHHHHHc--CCCeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhhcCC
Q 020928 135 GPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 135 ~~~~~vlI~G~g~vG~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~~~~ 208 (319)
+.+.+||=.|+|. |.....+++.. +. .++.+|.+++..+.+++ ++...+..+.. +..+ +.+. ...
T Consensus 2 ~~~~~iLDlGcG~-G~~~~~l~~~~~~~~-~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~---d~~~-l~~~---~~~ 72 (152)
T PF13847_consen 2 KSNKKILDLGCGT-GRLLIQLAKELNPGA-KIIGVDISEEMIEYAKKRAKELGLDNIEFIQG---DIED-LPQE---LEE 72 (152)
T ss_dssp TTTSEEEEET-TT-SHHHHHHHHHSTTTS-EEEEEESSHHHHHHHHHHHHHTTSTTEEEEES---BTTC-GCGC---SST
T ss_pred CCCCEEEEecCcC-cHHHHHHHHhcCCCC-EEEEEECcHHHHHHhhcccccccccccceEEe---ehhc-cccc---cCC
Confidence 4667888888776 77777888543 44 79999999998887766 45542211111 2211 1110 015
Q ss_pred CccEEEEcc-----CCh-HHHHHHHHhhcCCCEEEEecc
Q 020928 209 GIDVSFDCV-----GFD-KTMSTALNATRPGGKVCLIGL 241 (319)
Q Consensus 209 ~~d~v~d~~-----g~~-~~~~~~~~~l~~~G~~v~~g~ 241 (319)
.+|+|+... ... ..++.+.+.|+++|.++....
T Consensus 73 ~~D~I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~ 111 (152)
T PF13847_consen 73 KFDIIISNGVLHHFPDPEKVLKNIIRLLKPGGILIISDP 111 (152)
T ss_dssp TEEEEEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEEC
Confidence 799998863 222 357888999999999886643
No 491
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=93.62 E-value=2.5 Score=38.08 Aligned_cols=110 Identities=18% Similarity=0.205 Sum_probs=70.0
Q ss_pred HhcCCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEec--CChhHHHHHHHcCCCEeeccCCCC---cc---------
Q 020928 130 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVSTDI---ED--------- 194 (319)
Q Consensus 130 ~~~~~~~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~~g~~~v~~~~~~~---~~--------- 194 (319)
+++.+.||.+.+|.. +|+.|.++...|+.+|.+-++++. .+.++.+.++.+|++.+.. .... ..
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~-~~~~~~~~~~~~a~~l~~ 181 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLT-DPTKGMGGTVKKAYELLE 181 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEE-CCCCCccHHHHHHHHHHH
Confidence 446678887777766 799999999999999997666654 3567889999999876542 1000 00
Q ss_pred ----------h----------hHHHHHhhhhcCCCccEEEEccCChHHHHHHHHhh---cCCCEEEEec
Q 020928 195 ----------V----------DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT---RPGGKVCLIG 240 (319)
Q Consensus 195 ----------~----------~~~i~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l---~~~G~~v~~g 240 (319)
+ ...-.++.++.++.+|.++-++|+..++.-+.+.+ .+.=+++.+.
T Consensus 182 ~~~~~~~~~q~~np~~~~~g~~ttg~EI~eq~~~~~D~vV~~vGtGGt~aGv~~~lk~~~p~~kVigVe 250 (368)
T PLN02556 182 STPDAFMLQQFSNPANTQVHFETTGPEIWEDTLGQVDIFVMGIGSGGTVSGVGKYLKSKNPNVKIYGVE 250 (368)
T ss_pred hcCCCCccCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHHHHhCCCCEEEEEe
Confidence 0 00111233333346899998888876665555555 3444666554
No 492
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=93.62 E-value=2.4 Score=36.96 Aligned_cols=49 Identities=20% Similarity=0.314 Sum_probs=37.7
Q ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEecC--ChhHHHHHHHcCCCEe
Q 020928 137 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV--DVQRLSIARNLGADET 185 (319)
Q Consensus 137 ~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~--~~~~~~~~~~~g~~~v 185 (319)
.+.|+..++|..|.++...++.+|.+.++++.. ++++.+.++.+|+..+
T Consensus 65 ~~~iv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi 115 (304)
T cd01562 65 AKGVVAASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVV 115 (304)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEE
Confidence 455655678999999999999999976666643 5568888899997644
No 493
>PTZ00146 fibrillarin; Provisional
Probab=93.60 E-value=1.2 Score=38.48 Aligned_cols=105 Identities=12% Similarity=0.159 Sum_probs=61.6
Q ss_pred HHHhcCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHH-HHHHHcCC-CEeeccCCCCcchhHHHHHhhh
Q 020928 128 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRL-SIARNLGA-DETAKVSTDIEDVDTDVGKIQN 204 (319)
Q Consensus 128 ~l~~~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~-~~~~~~g~-~~v~~~~~~~~~~~~~i~~~~~ 204 (319)
.+....++++++||=+|+|+ |..+..++...|- ..|++++.+++.. ++++.... ..+..+..+... ......+
T Consensus 124 g~~~l~IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~~Da~~-p~~y~~~-- 199 (293)
T PTZ00146 124 GVANIPIKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPIIEDARY-PQKYRML-- 199 (293)
T ss_pred CcceeccCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEECCccC-hhhhhcc--
Confidence 34567899999999889876 7788888888753 2799998886533 22222111 111111111000 0111111
Q ss_pred hcCCCccEEEEccCChH----HHHHHHHhhcCCCEEEE
Q 020928 205 AMGSGIDVSFDCVGFDK----TMSTALNATRPGGKVCL 238 (319)
Q Consensus 205 ~~~~~~d~v~d~~g~~~----~~~~~~~~l~~~G~~v~ 238 (319)
...+|+||-.+..++ ....+.+.|+++|+++.
T Consensus 200 --~~~vDvV~~Dva~pdq~~il~~na~r~LKpGG~~vI 235 (293)
T PTZ00146 200 --VPMVDVIFADVAQPDQARIVALNAQYFLKNGGHFII 235 (293)
T ss_pred --cCCCCEEEEeCCCcchHHHHHHHHHHhccCCCEEEE
Confidence 125899987665543 23456679999999987
No 494
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=93.59 E-value=1.8 Score=38.35 Aligned_cols=95 Identities=21% Similarity=0.176 Sum_probs=60.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHHHH-HcCCCeEEEecCChhHHHH-HHHc----CCCEeeccCCCCcchhHHHHHhhhhcC
Q 020928 134 VGPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLSI-ARNL----GADETAKVSTDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 134 ~~~~~~vlI~G~g~vG~~ai~la~-~~g~~~vv~v~~~~~~~~~-~~~~----g~~~v~~~~~~~~~~~~~i~~~~~~~~ 207 (319)
.+...+++|+|+|..+.+.+..+. ..++++|.+.+++.++.+. ++++ +.. +..+ .+ +.+. -
T Consensus 126 ~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~----~~~a----v 192 (326)
T TIGR02992 126 REDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TD----PRAA----M 192 (326)
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CC----HHHH----h
Confidence 445678999999999987777665 5788789899998877553 3433 321 1111 11 1111 1
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEeccc
Q 020928 208 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 242 (319)
Q Consensus 208 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 242 (319)
.+.|+|+.|.+.... -...+.++++-.+..+|..
T Consensus 193 ~~aDiVvtaT~s~~p-~i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 193 SGADIIVTTTPSETP-ILHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred ccCCEEEEecCCCCc-EecHHHcCCCcEEEeeCCC
Confidence 368999999887531 1123467888777778753
No 495
>PRK05855 short chain dehydrogenase; Validated
Probab=93.58 E-value=0.61 Score=44.59 Aligned_cols=82 Identities=21% Similarity=0.270 Sum_probs=49.7
Q ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHH----HcCCC-EeeccC-CCCcchhHHHHHhhhhcCC
Q 020928 136 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 136 ~~~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~~g~~-~v~~~~-~~~~~~~~~i~~~~~~~~~ 208 (319)
.+.++||+| +|++|..+++.+...|. .|+.+++++++.+.+. +.|.. ..+..+ .+.++....+.++.+. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE-HG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence 356889998 59999998888888898 5777888776654332 22321 111111 1222222333333322 34
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
.+|++|++.|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 69999999885
No 496
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional
Probab=93.56 E-value=0.57 Score=39.12 Aligned_cols=98 Identities=20% Similarity=0.214 Sum_probs=60.4
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHHHHHc----CCCEeeccCCCCcchhHHHHHhhhhcC
Q 020928 132 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG 207 (319)
Q Consensus 132 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~i~~~~~~~~ 207 (319)
....++.+||-+|+|. |..+..+++. +. .++.++.++...+.+++. +... .+. ..+.. .+....+
T Consensus 44 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~iD~s~~~~~~a~~~~~~~~~~~--~~~--~~~~~----~~~~~~~ 112 (233)
T PRK05134 44 AGGLFGKRVLDVGCGG-GILSESMARL-GA-DVTGIDASEENIEVARLHALESGLKI--DYR--QTTAE----ELAAEHP 112 (233)
T ss_pred ccCCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEcCCHHHHHHHHHHHHHcCCce--EEE--ecCHH----HhhhhcC
Confidence 3456788898899875 7777777774 66 689999888877666542 2211 110 11211 1111124
Q ss_pred CCccEEEE-----ccCCh-HHHHHHHHhhcCCCEEEEec
Q 020928 208 SGIDVSFD-----CVGFD-KTMSTALNATRPGGKVCLIG 240 (319)
Q Consensus 208 ~~~d~v~d-----~~g~~-~~~~~~~~~l~~~G~~v~~g 240 (319)
..+|+|+- ..... ..+..+.+.|+++|+++...
T Consensus 113 ~~fD~Ii~~~~l~~~~~~~~~l~~~~~~L~~gG~l~v~~ 151 (233)
T PRK05134 113 GQFDVVTCMEMLEHVPDPASFVRACAKLVKPGGLVFFST 151 (233)
T ss_pred CCccEEEEhhHhhccCCHHHHHHHHHHHcCCCcEEEEEe
Confidence 57999853 33332 35678888999999988653
No 497
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.56 E-value=0.89 Score=39.95 Aligned_cols=81 Identities=23% Similarity=0.342 Sum_probs=47.7
Q ss_pred CCeEEEEC-CCHHHHHHHHHHHHcC-CCeEEEecCChhHHH-HHHHcCC--CE--eeccC-CCCcchhHHHHHhhhhcCC
Q 020928 137 ETNVMIMG-SGPIGLVTLLAARAFG-APRIIITDVDVQRLS-IARNLGA--DE--TAKVS-TDIEDVDTDVGKIQNAMGS 208 (319)
Q Consensus 137 ~~~vlI~G-~g~vG~~ai~la~~~g-~~~vv~v~~~~~~~~-~~~~~g~--~~--v~~~~-~~~~~~~~~i~~~~~~~~~ 208 (319)
+.+++|.| ++++|..++..+...| . +|+.+.+++++.+ ..+++.. .. .+..+ .+.++....+.++.+. .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES-GR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh-CC
Confidence 56889998 5999999888777789 6 6777777766544 3333431 11 11111 1122233333333322 34
Q ss_pred CccEEEEccCC
Q 020928 209 GIDVSFDCVGF 219 (319)
Q Consensus 209 ~~d~v~d~~g~ 219 (319)
++|++|.+.|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 498
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=93.53 E-value=1.6 Score=36.98 Aligned_cols=104 Identities=14% Similarity=0.152 Sum_probs=66.0
Q ss_pred cCCCCCCeEEEECCCHHHHHHHHHHHHcCC-CeEEEecCChhHHHHHHH----cCCCEeeccCCCCcchhHHHHHhhhhc
Q 020928 132 ANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 206 (319)
Q Consensus 132 ~~~~~~~~vlI~G~g~vG~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~i~~~~~~~ 206 (319)
.+..+.+++|-+|++. |..++.+|+.++- .++++++..++..+.+++ .|...-+.+ ...+..+.+.++....
T Consensus 75 ~~~~~ak~iLEiGT~~-GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~--~~G~a~e~L~~l~~~~ 151 (247)
T PLN02589 75 LKLINAKNTMEIGVYT-GYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDF--REGPALPVLDQMIEDG 151 (247)
T ss_pred HHHhCCCEEEEEeChh-hHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEE--EeccHHHHHHHHHhcc
Confidence 4556677899999743 7888888887632 279999998887776654 453332222 1234455555554321
Q ss_pred --CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEE
Q 020928 207 --GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCL 238 (319)
Q Consensus 207 --~~~~d~v~d~~g~~---~~~~~~~~~l~~~G~~v~ 238 (319)
...||.||--..-. ..+..++++|+++|.++.
T Consensus 152 ~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 152 KYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred ccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 25799986433321 356777889999998764
No 499
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=93.49 E-value=0.83 Score=36.74 Aligned_cols=81 Identities=23% Similarity=0.411 Sum_probs=50.9
Q ss_pred CeEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCh-hHHHHHHHcCC--CE-eeccC-CCCcchhHHHHHhhhhcCCCcc
Q 020928 138 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGA--DE-TAKVS-TDIEDVDTDVGKIQNAMGSGID 211 (319)
Q Consensus 138 ~~vlI~G-~g~vG~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~~g~--~~-v~~~~-~~~~~~~~~i~~~~~~~~~~~d 211 (319)
...+|.| ++++|.+..|++-..|+ ++++.+... ...+.++.++. ++ .+.-+ +...+....+++..+..+ .++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Ga-rv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g-~ps 92 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGA-RVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG-TPS 92 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCc-EEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC-CCc
Confidence 3456676 69999999999999999 666665544 45566677765 22 22111 122233333444444334 799
Q ss_pred EEEEccCCh
Q 020928 212 VSFDCVGFD 220 (319)
Q Consensus 212 ~v~d~~g~~ 220 (319)
++++|.|-.
T Consensus 93 vlVncAGIt 101 (256)
T KOG1200|consen 93 VLVNCAGIT 101 (256)
T ss_pred EEEEcCccc
Confidence 999999963
No 500
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.49 E-value=1.2 Score=38.72 Aligned_cols=38 Identities=13% Similarity=0.257 Sum_probs=32.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCeEEEecCChhHHHH
Q 020928 138 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 176 (319)
Q Consensus 138 ~~vlI~G~g~vG~~ai~la~~~g~~~vv~v~~~~~~~~~ 176 (319)
.+|.|+|+|.+|....+.+...|. .|+..+.+++..+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence 479999999999888888888898 79999999887765
Done!