Query 020930
Match_columns 319
No_of_seqs 238 out of 1029
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 10:16:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020930.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020930hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bbha1 d.328.1.1 (A:13-244) M 18.4 1.5E+02 0.011 22.9 7.3 30 139-168 197-226 (232)
2 d1sfka_ a.190.1.1 (A:) Flavivi 16.4 16 0.0011 24.9 0.2 27 149-175 40-66 (73)
3 d1wlza1 a.39.1.7 (A:229-311) D 12.2 1.7E+02 0.012 18.6 5.0 34 150-183 10-44 (83)
4 d1r6ra_ a.190.1.1 (A:) Flavivi 8.7 26 0.0019 24.2 -0.6 27 149-175 44-70 (80)
5 d1wa8a1 a.25.3.1 (A:1-99) ESAT 8.3 2.8E+02 0.02 18.2 9.5 65 88-154 10-74 (99)
6 d1khba1 c.91.1.1 (A:260-622) C 7.8 1.8E+02 0.013 25.3 4.5 33 82-114 324-361 (363)
7 d2drpa2 g.37.1.1 (A:140-165) T 7.2 92 0.0067 16.3 1.3 11 158-168 16-26 (26)
8 d1gv3a1 a.2.11.1 (A:25-126) Mn 6.9 89 0.0065 22.1 1.6 22 266-287 4-25 (102)
9 d1etxa_ a.4.1.12 (A:) FIS prot 6.8 1E+02 0.0073 21.0 1.9 34 137-170 54-87 (89)
10 d1agta_ g.3.7.2 (A:) Agitoxin 6.6 31 0.0023 20.0 -0.9 7 1-7 23-29 (38)
No 1
>d2bbha1 d.328.1.1 (A:13-244) Magnesium transport protein CorA, soluble domain {Thermotoga maritima [TaxId: 2336]}
Probab=18.41 E-value=1.5e+02 Score=22.90 Aligned_cols=30 Identities=10% Similarity=0.007 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhh
Q 020930 139 KDFVTIHGEMVLLKNYSSLNFAGLLKILKK 168 (319)
Q Consensus 139 ~~~~~l~~el~~L~~y~~LN~tgf~KILKK 168 (319)
..+..+-+++..|+++..=+...+.++++-
T Consensus 197 ~~i~~lrr~l~~lrr~l~p~revl~~L~r~ 226 (232)
T d2bbha1 197 QRTHQLKRNLVELRKTIWPLREVLSSLYRD 226 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 355666666678888888888888888864
No 2
>d1sfka_ a.190.1.1 (A:) Flavivirus capsid protein C {Kunjin virus [TaxId: 11077]}
Probab=16.44 E-value=16 Score=24.94 Aligned_cols=27 Identities=26% Similarity=0.394 Sum_probs=24.6
Q ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcCC
Q 020930 149 VLLKNYSSLNFAGLLKILKKYDKRTGG 175 (319)
Q Consensus 149 ~~L~~y~~LN~tgf~KILKK~DK~tg~ 175 (319)
.+|+.|..+|...-.||||.|.|-.|+
T Consensus 40 ~ll~RW~~v~K~~A~k~L~~FKKeig~ 66 (73)
T d1sfka_ 40 AVLDRWRSVNKQTAMKHLLSFKKELGT 66 (73)
T ss_dssp HHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999998764
No 3
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.17 E-value=1.7e+02 Score=18.64 Aligned_cols=34 Identities=12% Similarity=0.308 Sum_probs=23.3
Q ss_pred HHHhHHHHHHHHHHHHHhhhhhhcCCCC-chhHHH
Q 020930 150 LLKNYSSLNFAGLLKILKKYDKRTGGLL-RQPFTQ 183 (319)
Q Consensus 150 ~L~~y~~LN~tgf~KILKK~DK~tg~~l-~~~fl~ 183 (319)
.|+....-++..++++.+.||+.-...+ +..|..
T Consensus 10 ~l~~~i~~~~~~l~~~F~~~D~~~~G~i~~~ef~~ 44 (83)
T d1wlza1 10 RLHKAVTSHYHAITQEFENFDTMKTNTISREEFRA 44 (83)
T ss_dssp HHHHHHHHTHHHHHHHHHHHCTTCSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCceEChhHHHH
Confidence 4555666677889999999998864444 444443
No 4
>d1r6ra_ a.190.1.1 (A:) Flavivirus capsid protein C {Dengue virus type 2 [TaxId: 11060]}
Probab=8.75 E-value=26 Score=24.25 Aligned_cols=27 Identities=19% Similarity=0.468 Sum_probs=23.6
Q ss_pred HHHHhHHHHHHHHHHHHHhhhhhhcCC
Q 020930 149 VLLKNYSSLNFAGLLKILKKYDKRTGG 175 (319)
Q Consensus 149 ~~L~~y~~LN~tgf~KILKK~DK~tg~ 175 (319)
.+++.|..+|...-.||||+|.|.+|.
T Consensus 44 ~l~~rW~~v~k~~aik~Lk~FKk~i~~ 70 (80)
T d1r6ra_ 44 GILKRWGTIKKSKAINVLRGFRKEIGR 70 (80)
T ss_dssp HHHHHHTSSCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 378889999999999999999998764
No 5
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=8.35 E-value=2.8e+02 Score=18.19 Aligned_cols=65 Identities=6% Similarity=0.094 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhH
Q 020930 88 LEKFNDFYIDKEEEFVIRFQELKDRIERVKEKTGGAFTSESEFSEEMMEIRKDFVTIHGEMVLLKNY 154 (319)
Q Consensus 88 LeKVn~Fy~~ke~el~~rl~~L~~~~~~~~~~~~~~~~s~~~~~e~l~~L~~~~~~l~~el~~L~~y 154 (319)
|...-.=|...-.++...+..|...+..+...-.|. ....|.+.+......+..+...|..+...
T Consensus 10 l~~~A~~~~~~~~~l~~~l~~l~~~v~~l~~~W~G~--A~~af~~~~~~w~~~~~~l~~~L~~i~~~ 74 (99)
T d1wa8a1 10 LAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGA--AGTAAQAAVVRFQEAANKQKQELDEISTN 74 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344455566667777777776665332221 12245556666666666666666555543
No 6
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.83 E-value=1.8e+02 Score=25.25 Aligned_cols=33 Identities=24% Similarity=0.446 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Q 020930 82 RILREELEKFNDFYIDKEE-----EFVIRFQELKDRIE 114 (319)
Q Consensus 82 ~~Ld~ELeKVn~Fy~~ke~-----el~~rl~~L~~~~~ 114 (319)
....+|++.+..||.++.. ++...+..|.+++.
T Consensus 324 ~~w~~E~~~i~~~f~~~~g~~LP~el~~eL~~Lk~RL~ 361 (363)
T d1khba1 324 EFWDKEVEDIEKYLVDQVNADLPCEIEREILALKQRIS 361 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHh
Confidence 3456788999998876653 56666666666554
No 7
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}
Probab=7.25 E-value=92 Score=16.28 Aligned_cols=11 Identities=36% Similarity=0.613 Sum_probs=7.9
Q ss_pred HHHHHHHHHhh
Q 020930 158 NFAGLLKILKK 168 (319)
Q Consensus 158 N~tgf~KILKK 168 (319)
|.+|-+||+-|
T Consensus 16 nm~ahvkiihk 26 (26)
T d2drpa2 16 NMTAHVKIIHK 26 (26)
T ss_dssp HHHHHHHHHTC
T ss_pred CceEEEEEecC
Confidence 67778887754
No 8
>d1gv3a1 a.2.11.1 (A:25-126) Mn superoxide dismutase (MnSOD) {Anabaena sp. [TaxId: 1167]}
Probab=6.89 E-value=89 Score=22.05 Aligned_cols=22 Identities=18% Similarity=0.206 Sum_probs=16.5
Q ss_pred hhccCCccCCCCCCccccCCCc
Q 020930 266 LRKASSTSNPLSFSSLFESLDD 287 (319)
Q Consensus 266 ~~~~~st~~~~s~~~~~~~~~~ 287 (319)
.+.++-|..||.||||--.-++
T Consensus 4 ~~~~~~~~~pf~Lp~LPY~yda 25 (102)
T d1gv3a1 4 FIDRQLGTNPAELPPLPYGYDA 25 (102)
T ss_dssp SSSSCCCCTTCCCCCCSSCTTT
T ss_pred ccccccCCCCCcCCCCCCCccc
Confidence 3456677789999999877554
No 9
>d1etxa_ a.4.1.12 (A:) FIS protein {Escherichia coli [TaxId: 562]}
Probab=6.84 E-value=1e+02 Score=21.01 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhh
Q 020930 137 IRKDFVTIHGEMVLLKNYSSLNFAGLLKILKKYD 170 (319)
Q Consensus 137 L~~~~~~l~~el~~L~~y~~LN~tgf~KILKK~D 170 (319)
|..++....+....-....-|+.+.|++-||||.
T Consensus 54 i~~aL~~~~gn~~~aA~~LGisR~tL~~klk~~g 87 (89)
T d1etxa_ 54 LDMVMQYTRGNATRAALMMGINRGTLRKKLKKYG 87 (89)
T ss_dssp HHHHHHHTTTCHHHHHHHHTSCHHHHHHHHHHTT
T ss_pred HHHHHHHcCCcHHHHHHHHCCCHHHHHHHHHHhC
Confidence 4445555555556666677788999999999984
No 10
>d1agta_ g.3.7.2 (A:) Agitoxin {Scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884]}
Probab=6.59 E-value=31 Score=20.01 Aligned_cols=7 Identities=57% Similarity=1.065 Sum_probs=4.5
Q ss_pred CcchhhH
Q 020930 1 MKFGKEF 7 (319)
Q Consensus 1 MKFGK~L 7 (319)
|+|||-+
T Consensus 23 mrfgkcm 29 (38)
T d1agta_ 23 MRFGKCM 29 (38)
T ss_dssp EEEEEEE
T ss_pred chhhhee
Confidence 6777644
Done!