Query 020932
Match_columns 319
No_of_seqs 401 out of 2581
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 06:18:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020932.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020932hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4667 Predicted esterase [Li 100.0 3E-33 6.5E-38 203.9 19.8 252 60-311 9-260 (269)
2 PLN02385 hydrolase; alpha/beta 100.0 6.8E-32 1.5E-36 227.1 26.6 254 57-311 57-347 (349)
3 PLN02298 hydrolase, alpha/beta 100.0 4.5E-31 9.8E-36 220.8 25.6 256 58-314 29-322 (330)
4 PHA02857 monoglyceride lipase; 100.0 6.1E-31 1.3E-35 214.9 24.5 242 66-309 5-273 (276)
5 PRK00870 haloalkane dehalogena 100.0 1.1E-30 2.4E-35 215.9 23.7 245 59-309 19-301 (302)
6 PRK10749 lysophospholipase L2; 100.0 2.2E-30 4.8E-35 216.0 23.3 248 60-309 29-329 (330)
7 PRK13604 luxD acyl transferase 100.0 3.7E-30 7.9E-35 204.9 22.7 228 61-295 9-249 (307)
8 PLN02824 hydrolase, alpha/beta 100.0 3.8E-30 8.3E-35 212.0 23.8 241 58-308 7-293 (294)
9 TIGR02240 PHA_depoly_arom poly 100.0 3E-30 6.6E-35 210.6 22.0 235 70-311 10-268 (276)
10 KOG1455 Lysophospholipase [Lip 100.0 2.7E-29 5.8E-34 194.2 22.6 251 57-309 23-312 (313)
11 PRK03592 haloalkane dehalogena 100.0 2.2E-29 4.8E-34 207.6 22.3 232 70-310 15-290 (295)
12 PLN02965 Probable pheophorbida 100.0 2E-29 4.4E-34 203.3 20.6 219 85-309 4-253 (255)
13 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.2E-28 2.6E-33 202.2 23.9 240 62-307 8-281 (282)
14 PLN02652 hydrolase; alpha/beta 100.0 7.8E-28 1.7E-32 202.9 27.6 248 58-311 107-389 (395)
15 PRK06489 hypothetical protein; 100.0 1E-28 2.2E-33 208.5 21.8 252 54-310 29-358 (360)
16 PRK10673 acyl-CoA esterase; Pr 100.0 1.5E-28 3.3E-33 198.6 21.0 219 82-308 14-254 (255)
17 PRK03204 haloalkane dehalogena 100.0 4.1E-28 8.9E-33 198.4 23.1 229 70-306 22-285 (286)
18 TIGR03056 bchO_mg_che_rel puta 100.0 4E-28 8.6E-33 198.7 22.9 232 70-307 14-278 (278)
19 PLN02679 hydrolase, alpha/beta 100.0 5.4E-28 1.2E-32 203.6 23.4 232 71-308 70-356 (360)
20 COG2267 PldB Lysophospholipase 100.0 9.4E-28 2E-32 195.0 23.8 250 60-311 8-296 (298)
21 COG1647 Esterase/lipase [Gener 100.0 8.4E-29 1.8E-33 182.1 15.4 221 84-308 15-243 (243)
22 PLN03087 BODYGUARD 1 domain co 100.0 8.1E-28 1.8E-32 205.3 23.4 235 69-308 183-478 (481)
23 PLN03084 alpha/beta hydrolase 100.0 1.4E-27 3.1E-32 200.0 24.5 234 68-308 111-383 (383)
24 KOG4178 Soluble epoxide hydrol 100.0 9.5E-28 2.1E-32 188.7 20.7 246 57-310 20-321 (322)
25 TIGR03611 RutD pyrimidine util 100.0 7.8E-28 1.7E-32 194.6 20.2 219 82-308 11-257 (257)
26 PLN02578 hydrolase 100.0 8.1E-28 1.8E-32 202.4 20.7 228 70-307 74-353 (354)
27 KOG4391 Predicted alpha/beta h 100.0 2E-28 4.3E-33 179.0 14.5 252 26-311 25-284 (300)
28 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.5E-27 3.2E-32 192.1 18.7 226 75-307 3-251 (251)
29 PLN02511 hydrolase 100.0 3.7E-27 8E-32 199.8 21.1 255 58-312 68-368 (388)
30 PRK05077 frsA fermentation/res 100.0 2.1E-26 4.6E-31 195.9 25.6 237 57-310 164-413 (414)
31 PRK10349 carboxylesterase BioH 100.0 4.9E-27 1.1E-31 189.7 19.3 214 82-308 10-255 (256)
32 PLN02211 methyl indole-3-aceta 100.0 5E-26 1.1E-30 184.4 22.4 231 70-308 5-269 (273)
33 TIGR01250 pro_imino_pep_2 prol 100.0 3.5E-26 7.6E-31 187.9 21.6 233 70-307 10-288 (288)
34 PRK11126 2-succinyl-6-hydroxy- 99.9 3.4E-26 7.3E-31 183.4 20.4 211 84-308 2-241 (242)
35 KOG1454 Predicted hydrolase/ac 99.9 2.9E-26 6.4E-31 188.0 19.6 223 83-310 57-325 (326)
36 TIGR01607 PST-A Plasmodium sub 99.9 1.4E-25 3E-30 186.6 22.8 242 66-307 2-331 (332)
37 PF12697 Abhydrolase_6: Alpha/ 99.9 2.1E-27 4.4E-32 188.3 11.1 208 87-300 1-227 (228)
38 KOG4409 Predicted hydrolase/ac 99.9 1.1E-25 2.5E-30 177.5 19.9 243 61-309 67-364 (365)
39 PRK10985 putative hydrolase; P 99.9 1.4E-25 3E-30 186.6 21.6 251 60-311 30-322 (324)
40 PRK07581 hypothetical protein; 99.9 4.3E-26 9.4E-31 191.4 17.5 237 70-311 24-338 (339)
41 TIGR01249 pro_imino_pep_1 prol 99.9 2.8E-25 6E-30 183.7 21.6 237 65-309 8-305 (306)
42 TIGR01738 bioH putative pimelo 99.9 8.3E-26 1.8E-30 181.2 17.9 212 84-306 4-245 (245)
43 PRK08775 homoserine O-acetyltr 99.9 4.1E-26 8.8E-31 191.5 16.3 235 69-309 43-339 (343)
44 TIGR03695 menH_SHCHC 2-succiny 99.9 1.3E-25 2.8E-30 180.6 18.5 217 84-307 1-251 (251)
45 TIGR03100 hydr1_PEP hydrolase, 99.9 9.6E-25 2.1E-29 177.1 23.1 240 62-308 3-274 (274)
46 PRK14875 acetoin dehydrogenase 99.9 1.5E-25 3.1E-30 191.1 18.4 229 71-308 118-370 (371)
47 PLN02894 hydrolase, alpha/beta 99.9 4.5E-24 9.8E-29 181.7 25.3 234 73-313 93-389 (402)
48 TIGR01392 homoserO_Ac_trn homo 99.9 3.1E-25 6.7E-30 186.8 17.9 235 70-307 14-351 (351)
49 KOG1552 Predicted alpha/beta h 99.9 2.1E-24 4.6E-29 163.9 18.3 216 60-312 34-255 (258)
50 PRK00175 metX homoserine O-ace 99.9 1.8E-24 3.8E-29 183.5 18.6 238 71-311 32-376 (379)
51 PRK10566 esterase; Provisional 99.9 1.7E-23 3.7E-28 168.3 21.3 206 83-310 26-249 (249)
52 PLN02872 triacylglycerol lipas 99.9 1.1E-23 2.3E-28 177.1 17.5 254 57-311 40-391 (395)
53 PLN02980 2-oxoglutarate decarb 99.9 3.3E-23 7.2E-28 201.6 23.4 251 57-315 1342-1645(1655)
54 PRK05855 short chain dehydroge 99.9 2.8E-23 6E-28 187.5 20.2 235 68-310 9-293 (582)
55 KOG2984 Predicted hydrolase [G 99.9 5E-24 1.1E-28 154.4 11.5 240 58-309 20-276 (277)
56 PRK11071 esterase YqiA; Provis 99.9 4.5E-23 9.7E-28 157.3 17.5 186 85-307 2-189 (190)
57 COG1506 DAP2 Dipeptidyl aminop 99.9 4.6E-23 9.9E-28 184.5 17.3 240 57-312 361-619 (620)
58 COG2945 Predicted hydrolase of 99.9 2.7E-22 5.9E-27 144.7 16.9 195 61-307 4-205 (210)
59 COG0429 Predicted hydrolase of 99.9 4.7E-22 1E-26 156.3 18.5 252 60-311 48-342 (345)
60 KOG2382 Predicted alpha/beta h 99.9 7.8E-22 1.7E-26 155.6 18.7 225 82-310 50-314 (315)
61 PF12695 Abhydrolase_5: Alpha/ 99.9 4.4E-22 9.6E-27 146.5 15.7 142 86-290 1-145 (145)
62 TIGR03101 hydr2_PEP hydrolase, 99.9 1E-20 2.2E-25 150.4 22.4 135 64-199 3-143 (266)
63 KOG1838 Alpha/beta hydrolase [ 99.9 2.3E-20 4.9E-25 152.4 21.9 256 56-311 88-390 (409)
64 TIGR01836 PHA_synth_III_C poly 99.9 1.2E-20 2.7E-25 158.7 19.3 245 58-308 35-349 (350)
65 PF00326 Peptidase_S9: Prolyl 99.9 7.8E-21 1.7E-25 149.0 15.7 195 102-312 3-212 (213)
66 PF01738 DLH: Dienelactone hyd 99.9 7.8E-20 1.7E-24 143.7 18.9 179 83-310 13-218 (218)
67 PRK11460 putative hydrolase; P 99.9 9.2E-20 2E-24 143.9 18.1 173 83-310 15-209 (232)
68 KOG2564 Predicted acetyltransf 99.8 7.9E-20 1.7E-24 139.5 16.4 241 61-309 50-327 (343)
69 PRK06765 homoserine O-acetyltr 99.8 1.8E-19 3.9E-24 151.7 18.3 234 72-308 41-387 (389)
70 COG0412 Dienelactone hydrolase 99.8 1.9E-18 4.2E-23 135.7 21.6 199 62-311 3-235 (236)
71 PF00561 Abhydrolase_1: alpha/ 99.8 2.6E-20 5.6E-25 148.1 9.6 187 114-303 1-229 (230)
72 PF06500 DUF1100: Alpha/beta h 99.8 2.8E-19 6.2E-24 147.2 15.7 237 57-310 161-410 (411)
73 PF05448 AXE1: Acetyl xylan es 99.8 9.2E-19 2E-23 143.2 18.6 235 57-308 52-319 (320)
74 PRK10115 protease 2; Provision 99.8 1.6E-18 3.4E-23 156.4 21.4 244 58-318 413-684 (686)
75 TIGR01838 PHA_synth_I poly(R)- 99.8 1.1E-18 2.3E-23 151.1 18.2 214 74-292 174-457 (532)
76 PRK07868 acyl-CoA synthetase; 99.8 1.6E-18 3.6E-23 163.7 19.1 225 83-312 66-364 (994)
77 TIGR02821 fghA_ester_D S-formy 99.8 2.4E-17 5.2E-22 134.0 23.0 226 60-308 12-273 (275)
78 COG3208 GrsT Predicted thioest 99.8 1E-18 2.2E-23 132.3 13.4 221 81-308 4-235 (244)
79 PLN02442 S-formylglutathione h 99.8 3.4E-17 7.4E-22 133.3 21.2 211 60-292 17-264 (283)
80 PF02273 Acyl_transf_2: Acyl t 99.8 1.6E-17 3.4E-22 124.7 17.0 225 64-295 5-242 (294)
81 PLN00021 chlorophyllase 99.8 5E-17 1.1E-21 133.0 19.6 194 74-313 39-287 (313)
82 TIGR00976 /NonD putative hydro 99.8 2.5E-17 5.3E-22 146.4 18.7 127 66-193 1-135 (550)
83 PRK10162 acetyl esterase; Prov 99.8 2.9E-16 6.3E-21 130.1 22.7 227 59-311 55-317 (318)
84 PF02230 Abhydrolase_2: Phosph 99.8 2E-17 4.4E-22 129.6 13.6 178 83-310 13-216 (216)
85 TIGR01840 esterase_phb esteras 99.8 5.4E-17 1.2E-21 126.9 15.8 171 83-277 12-195 (212)
86 COG0596 MhpC Predicted hydrola 99.7 3.3E-16 7.1E-21 126.9 19.3 217 84-307 21-280 (282)
87 COG3458 Acetyl esterase (deace 99.7 4.2E-16 9.1E-21 118.9 14.3 236 57-308 52-316 (321)
88 KOG3043 Predicted hydrolase re 99.7 1.5E-15 3.3E-20 112.8 14.2 186 74-310 28-241 (242)
89 PF06342 DUF1057: Alpha/beta h 99.7 2E-14 4.4E-19 111.3 20.7 126 61-191 6-138 (297)
90 PF06821 Ser_hydrolase: Serine 99.7 4.1E-16 8.8E-21 116.1 10.6 154 87-294 1-157 (171)
91 PF05728 UPF0227: Uncharacteri 99.7 3.2E-15 6.9E-20 112.4 15.4 183 87-306 2-186 (187)
92 PF02129 Peptidase_S15: X-Pro 99.7 3.7E-15 8E-20 121.1 16.1 123 70-194 1-140 (272)
93 COG4757 Predicted alpha/beta h 99.7 1.4E-15 3E-20 113.4 11.9 241 64-306 8-280 (281)
94 COG0400 Predicted esterase [Ge 99.7 3.7E-15 8E-20 113.4 14.0 173 83-310 17-206 (207)
95 PRK05371 x-prolyl-dipeptidyl a 99.7 8.5E-15 1.8E-19 133.2 18.6 209 104-315 270-525 (767)
96 KOG2624 Triglyceride lipase-ch 99.6 1.4E-14 3.1E-19 120.5 17.5 255 56-310 43-399 (403)
97 TIGR01839 PHA_synth_II poly(R) 99.6 1.2E-14 2.5E-19 124.8 17.2 115 74-193 201-331 (560)
98 PF09752 DUF2048: Uncharacteri 99.6 1.8E-14 3.9E-19 115.9 17.1 224 83-308 91-348 (348)
99 TIGR01849 PHB_depoly_PhaZ poly 99.6 8.8E-14 1.9E-18 116.1 19.0 218 85-308 103-405 (406)
100 COG3571 Predicted hydrolase of 99.6 1.3E-13 2.8E-18 96.8 16.7 183 80-308 9-210 (213)
101 TIGR03230 lipo_lipase lipoprot 99.6 1.7E-14 3.6E-19 121.7 13.6 108 83-190 40-154 (442)
102 PF08538 DUF1749: Protein of u 99.6 1.1E-13 2.5E-18 109.7 17.0 218 83-307 32-303 (303)
103 COG2021 MET2 Homoserine acetyl 99.6 7.7E-14 1.7E-18 112.3 15.6 235 71-308 35-367 (368)
104 PF12715 Abhydrolase_7: Abhydr 99.6 2.8E-14 6E-19 115.9 12.2 133 56-188 83-258 (390)
105 cd00707 Pancreat_lipase_like P 99.6 2.6E-14 5.6E-19 115.5 10.2 109 83-191 35-148 (275)
106 PF06057 VirJ: Bacterial virul 99.6 3.3E-13 7.2E-18 99.3 14.7 179 85-308 3-191 (192)
107 PF12146 Hydrolase_4: Putative 99.5 4.5E-14 9.8E-19 90.4 8.5 76 71-148 1-79 (79)
108 PF03096 Ndr: Ndr family; Int 99.5 1.6E-13 3.5E-18 107.8 13.3 236 65-308 3-278 (283)
109 PF07859 Abhydrolase_3: alpha/ 99.5 3.9E-14 8.4E-19 111.0 8.9 99 87-192 1-112 (211)
110 PF06028 DUF915: Alpha/beta hy 99.5 4.2E-13 9.1E-18 105.8 14.2 204 83-307 10-253 (255)
111 KOG2931 Differentiation-relate 99.5 4.5E-12 9.7E-17 98.4 19.2 240 61-308 22-305 (326)
112 PF00975 Thioesterase: Thioest 99.5 1.4E-13 3E-18 109.3 11.2 211 85-306 1-229 (229)
113 KOG2100 Dipeptidyl aminopeptid 99.5 8.2E-13 1.8E-17 120.1 17.0 229 60-314 499-752 (755)
114 KOG2281 Dipeptidyl aminopeptid 99.5 1.2E-12 2.5E-17 111.5 16.5 226 59-308 611-866 (867)
115 PF12740 Chlorophyllase2: Chlo 99.5 4E-12 8.7E-17 99.1 17.0 100 82-190 15-131 (259)
116 COG0657 Aes Esterase/lipase [L 99.5 1.1E-11 2.3E-16 103.1 20.7 213 71-307 61-308 (312)
117 PF08840 BAAT_C: BAAT / Acyl-C 99.5 5.8E-13 1.3E-17 103.5 11.0 169 141-311 4-212 (213)
118 PF10503 Esterase_phd: Esteras 99.5 1.1E-12 2.4E-17 101.0 11.5 171 83-276 15-195 (220)
119 TIGR03502 lipase_Pla1_cef extr 99.5 9.8E-13 2.1E-17 117.9 12.7 110 65-176 421-575 (792)
120 KOG1515 Arylacetamide deacetyl 99.4 2.6E-11 5.5E-16 99.2 18.7 233 57-309 59-335 (336)
121 KOG2551 Phospholipase/carboxyh 99.4 1.5E-11 3.2E-16 91.9 15.6 180 83-311 4-222 (230)
122 PF10230 DUF2305: Uncharacteri 99.4 1.2E-11 2.5E-16 99.5 16.3 105 84-190 2-122 (266)
123 PF07224 Chlorophyllase: Chlor 99.4 1.7E-11 3.8E-16 93.7 15.7 102 81-191 43-158 (307)
124 COG3545 Predicted esterase of 99.4 7.9E-12 1.7E-16 89.9 13.0 170 85-308 3-178 (181)
125 COG2936 Predicted acyl esteras 99.4 1E-11 2.2E-16 106.5 16.0 138 55-193 13-162 (563)
126 KOG4627 Kynurenine formamidase 99.4 2.9E-12 6.3E-17 94.0 9.9 201 59-291 43-248 (270)
127 PF03403 PAF-AH_p_II: Platelet 99.4 1E-11 2.3E-16 104.4 14.0 179 82-312 98-361 (379)
128 COG3243 PhaC Poly(3-hydroxyalk 99.4 4E-12 8.7E-17 103.9 10.4 109 83-194 106-221 (445)
129 PF03959 FSH1: Serine hydrolas 99.3 7.2E-12 1.6E-16 97.6 10.0 163 83-293 3-204 (212)
130 PF05677 DUF818: Chlamydia CHL 99.3 7.2E-10 1.6E-14 88.6 20.2 114 60-177 111-236 (365)
131 COG4099 Predicted peptidase [G 99.3 3.9E-11 8.4E-16 93.3 12.5 154 69-277 169-342 (387)
132 COG1505 Serine proteases of th 99.3 5.3E-11 1.2E-15 101.2 13.6 239 57-310 390-647 (648)
133 PRK04940 hypothetical protein; 99.3 5.3E-10 1.1E-14 82.4 16.2 174 87-308 2-179 (180)
134 KOG1553 Predicted alpha/beta h 99.3 3.7E-11 8.1E-16 95.2 10.3 131 59-196 212-351 (517)
135 KOG2112 Lysophospholipase [Lip 99.3 8.9E-11 1.9E-15 87.2 11.3 176 84-308 3-203 (206)
136 PRK10252 entF enterobactin syn 99.2 1.4E-10 3E-15 114.5 14.5 217 82-310 1066-1294(1296)
137 COG4188 Predicted dienelactone 99.2 5.4E-11 1.2E-15 96.4 9.4 196 83-291 70-295 (365)
138 COG4814 Uncharacterized protei 99.2 1.1E-09 2.3E-14 83.5 14.1 201 86-308 47-286 (288)
139 PF03583 LIP: Secretory lipase 99.2 1.4E-09 3E-14 88.7 15.0 65 248-314 217-286 (290)
140 PF07819 PGAP1: PGAP1-like pro 99.2 9.5E-10 2.1E-14 86.0 12.7 107 83-194 3-127 (225)
141 COG3509 LpqC Poly(3-hydroxybut 99.2 3.9E-10 8.5E-15 88.2 10.3 124 64-190 38-179 (312)
142 PTZ00472 serine carboxypeptida 99.1 1.5E-08 3.2E-13 87.9 20.1 118 71-191 60-217 (462)
143 PF12048 DUF3530: Protein of u 99.1 7.8E-08 1.7E-12 79.0 22.5 204 61-309 62-309 (310)
144 KOG2237 Predicted serine prote 99.1 1.6E-09 3.4E-14 93.0 12.3 244 57-312 437-708 (712)
145 KOG2565 Predicted hydrolases o 99.1 3.6E-09 7.9E-14 85.0 12.4 110 70-184 132-258 (469)
146 PF01674 Lipase_2: Lipase (cla 99.1 1.8E-10 3.9E-15 88.7 4.8 100 85-186 2-105 (219)
147 KOG3253 Predicted alpha/beta h 99.0 6.3E-09 1.4E-13 88.6 12.0 160 83-291 175-346 (784)
148 PRK10439 enterobactin/ferric e 99.0 1E-07 2.2E-12 81.5 19.1 126 62-190 181-323 (411)
149 KOG1551 Uncharacterized conser 99.0 5.7E-09 1.2E-13 80.0 9.6 230 77-309 106-366 (371)
150 KOG3975 Uncharacterized conser 99.0 4.4E-07 9.6E-12 69.3 19.4 218 83-306 28-300 (301)
151 COG3319 Thioesterase domains o 98.9 5.1E-09 1.1E-13 82.6 9.0 100 85-191 1-104 (257)
152 PLN02733 phosphatidylcholine-s 98.9 4.6E-09 9.9E-14 89.7 9.3 91 100-193 108-204 (440)
153 KOG3847 Phospholipase A2 (plat 98.9 1.4E-08 3E-13 79.9 10.9 106 83-190 117-275 (399)
154 PF00151 Lipase: Lipase; Inte 98.9 2.1E-09 4.6E-14 88.7 5.4 109 83-191 70-188 (331)
155 COG1770 PtrB Protease II [Amin 98.9 1.6E-07 3.5E-12 81.6 15.4 226 56-294 414-660 (682)
156 PF10340 DUF2424: Protein of u 98.8 1.3E-07 2.9E-12 78.0 14.0 106 83-193 121-238 (374)
157 PF00756 Esterase: Putative es 98.8 4.9E-08 1.1E-12 78.6 11.3 111 83-193 23-153 (251)
158 PF11339 DUF3141: Protein of u 98.8 9.1E-07 2E-11 75.0 17.8 86 103-194 91-179 (581)
159 PF00450 Peptidase_S10: Serine 98.8 9.3E-07 2E-11 76.8 18.0 125 65-192 17-183 (415)
160 KOG4840 Predicted hydrolases o 98.8 1.8E-06 3.8E-11 64.9 16.2 108 83-193 35-147 (299)
161 PLN02606 palmitoyl-protein thi 98.8 3.1E-06 6.7E-11 67.7 18.7 104 83-191 25-133 (306)
162 PF05705 DUF829: Eukaryotic pr 98.7 5.1E-08 1.1E-12 77.8 8.6 209 86-306 1-240 (240)
163 PF05990 DUF900: Alpha/beta hy 98.7 1.6E-07 3.5E-12 74.0 10.2 109 82-191 16-138 (233)
164 PF11144 DUF2920: Protein of u 98.7 4.7E-06 1E-10 69.3 18.1 166 141-308 164-367 (403)
165 PLN02633 palmitoyl protein thi 98.7 1.2E-05 2.5E-10 64.6 19.3 105 82-190 23-131 (314)
166 COG3150 Predicted esterase [Ge 98.6 3.8E-06 8.3E-11 60.2 14.5 184 87-307 2-187 (191)
167 KOG3101 Esterase D [General fu 98.6 4.2E-07 9E-12 67.6 9.9 110 83-192 43-178 (283)
168 smart00824 PKS_TE Thioesterase 98.6 2E-06 4.2E-11 67.1 13.8 95 89-190 2-102 (212)
169 PF05577 Peptidase_S28: Serine 98.6 2.9E-07 6.3E-12 80.2 9.5 108 84-191 29-149 (434)
170 COG1073 Hydrolases of the alph 98.6 4.8E-06 1E-10 68.6 15.6 221 83-310 48-298 (299)
171 COG2272 PnbA Carboxylesterase 98.5 3.5E-07 7.7E-12 77.2 8.0 124 67-191 75-218 (491)
172 cd00312 Esterase_lipase Estera 98.5 1.1E-06 2.4E-11 78.0 11.0 121 68-191 75-214 (493)
173 COG3946 VirJ Type IV secretory 98.5 2.1E-06 4.7E-11 70.3 11.4 89 83-178 259-348 (456)
174 PF04301 DUF452: Protein of un 98.5 1.3E-06 2.7E-11 66.8 9.5 83 81-191 8-91 (213)
175 PF05057 DUF676: Putative seri 98.5 7.8E-07 1.7E-11 69.5 8.7 90 83-175 3-97 (217)
176 KOG2541 Palmitoyl protein thio 98.5 1.2E-05 2.6E-10 62.4 14.5 102 85-190 24-128 (296)
177 COG4782 Uncharacterized protei 98.4 2.8E-06 6E-11 69.0 9.7 109 82-191 114-235 (377)
178 PF00135 COesterase: Carboxyle 98.4 3.9E-06 8.5E-11 75.4 11.3 122 68-190 105-245 (535)
179 COG1075 LipA Predicted acetylt 98.3 3.2E-06 6.9E-11 70.6 7.5 100 84-191 59-165 (336)
180 PLN02209 serine carboxypeptida 98.3 0.00079 1.7E-08 58.3 22.2 128 62-192 42-214 (437)
181 PF08386 Abhydrolase_4: TAP-li 98.2 3.7E-06 8.1E-11 57.1 6.1 59 250-308 34-93 (103)
182 PF10142 PhoPQ_related: PhoPQ- 98.2 4.2E-05 9E-10 63.8 13.2 148 154-313 170-324 (367)
183 PLN03016 sinapoylglucose-malat 98.2 0.0014 3E-08 56.8 22.1 127 64-191 42-211 (433)
184 COG0627 Predicted esterase [Ge 98.2 3.5E-05 7.5E-10 63.2 11.4 225 83-311 53-313 (316)
185 PF02450 LCAT: Lecithin:choles 98.2 1.1E-05 2.4E-10 68.9 8.9 83 101-191 66-161 (389)
186 PF02089 Palm_thioest: Palmito 98.1 8E-06 1.7E-10 64.9 5.5 107 82-190 3-116 (279)
187 KOG3724 Negative regulator of 98.0 6E-05 1.3E-09 67.2 10.3 106 83-193 88-223 (973)
188 PF05576 Peptidase_S37: PS-10 97.9 0.00046 9.9E-09 57.5 12.6 105 82-190 61-169 (448)
189 COG2382 Fes Enterochelin ester 97.9 0.00059 1.3E-08 54.6 12.6 107 83-192 97-214 (299)
190 KOG2183 Prolylcarboxypeptidase 97.8 8.3E-05 1.8E-09 61.5 7.0 101 85-188 81-200 (492)
191 COG4553 DepA Poly-beta-hydroxy 97.8 0.0019 4.1E-08 51.2 13.9 105 83-193 102-212 (415)
192 KOG3967 Uncharacterized conser 97.8 0.00082 1.8E-08 50.6 11.2 105 83-189 100-226 (297)
193 PF04083 Abhydro_lipase: Parti 97.7 9.4E-05 2E-09 44.7 4.4 43 57-99 8-58 (63)
194 PLN02517 phosphatidylcholine-s 97.6 0.00017 3.8E-09 63.0 6.5 90 100-191 156-264 (642)
195 COG2819 Predicted hydrolase of 97.5 0.0038 8.1E-08 49.3 12.6 40 154-193 135-175 (264)
196 KOG2182 Hydrolytic enzymes of 97.5 0.0015 3.4E-08 55.7 10.9 108 82-192 84-209 (514)
197 PF07082 DUF1350: Protein of u 97.5 0.0022 4.8E-08 50.0 10.9 103 80-188 13-123 (250)
198 KOG1516 Carboxylesterase and r 97.5 0.0011 2.4E-08 59.8 10.7 121 68-190 93-232 (545)
199 PLN02213 sinapoylglucose-malat 97.3 0.065 1.4E-06 44.8 18.2 59 250-308 233-316 (319)
200 PF06259 Abhydrolase_8: Alpha/ 97.2 0.018 3.9E-07 43.1 12.5 107 83-189 18-143 (177)
201 cd00741 Lipase Lipase. Lipase 97.2 0.0012 2.6E-08 48.7 6.1 53 139-191 10-68 (153)
202 KOG2369 Lecithin:cholesterol a 97.0 0.0019 4.2E-08 54.8 6.3 85 100-189 124-224 (473)
203 PF11187 DUF2974: Protein of u 96.9 0.0027 5.9E-08 49.7 5.9 49 142-190 70-123 (224)
204 PF01764 Lipase_3: Lipase (cla 96.9 0.0025 5.5E-08 46.1 5.3 36 142-177 49-85 (140)
205 COG4947 Uncharacterized protei 96.7 0.013 2.8E-07 42.7 7.5 54 140-193 84-139 (227)
206 KOG1282 Serine carboxypeptidas 96.7 0.022 4.7E-07 49.3 10.0 125 63-191 48-214 (454)
207 COG4287 PqaA PhoPQ-activated p 96.6 0.0059 1.3E-07 50.1 5.8 140 154-308 232-386 (507)
208 cd00519 Lipase_3 Lipase (class 96.6 0.0062 1.4E-07 48.2 5.9 38 140-177 111-149 (229)
209 COG2939 Carboxypeptidase C (ca 96.5 0.018 3.8E-07 49.7 8.5 104 83-189 100-235 (498)
210 COG2830 Uncharacterized protei 96.3 0.029 6.4E-07 40.4 7.2 79 82-188 9-88 (214)
211 PF01083 Cutinase: Cutinase; 96.2 0.027 5.9E-07 42.5 7.4 104 86-191 7-123 (179)
212 KOG2521 Uncharacterized conser 96.2 0.2 4.3E-06 41.8 12.6 225 82-314 36-295 (350)
213 PF11288 DUF3089: Protein of u 96.2 0.01 2.2E-07 45.4 4.7 72 105-177 38-116 (207)
214 PLN02454 triacylglycerol lipas 96.0 0.017 3.6E-07 49.1 5.7 38 139-176 208-248 (414)
215 KOG4372 Predicted alpha/beta h 95.7 0.019 4.1E-07 48.1 4.8 87 83-174 79-168 (405)
216 PF06850 PHB_depo_C: PHB de-po 95.6 0.023 4.9E-07 42.7 4.5 59 250-308 134-201 (202)
217 PLN02310 triacylglycerol lipas 95.3 0.03 6.5E-07 47.5 4.7 36 141-176 193-229 (405)
218 KOG4388 Hormone-sensitive lipa 95.3 0.07 1.5E-06 46.9 6.8 97 83-189 395-507 (880)
219 PLN02571 triacylglycerol lipas 95.1 0.049 1.1E-06 46.4 5.5 20 157-176 227-246 (413)
220 PLN00413 triacylglycerol lipas 95.1 0.035 7.7E-07 47.8 4.6 22 154-175 282-303 (479)
221 TIGR03712 acc_sec_asp2 accesso 95.0 1.2 2.7E-05 38.7 13.4 110 71-191 275-391 (511)
222 PLN02162 triacylglycerol lipas 94.9 0.041 8.9E-07 47.3 4.5 22 154-175 276-297 (475)
223 PLN03037 lipase class 3 family 94.9 0.043 9.3E-07 47.8 4.5 36 141-176 302-338 (525)
224 PLN02408 phospholipase A1 94.6 0.056 1.2E-06 45.3 4.4 21 157-177 201-221 (365)
225 PLN02324 triacylglycerol lipas 94.6 0.088 1.9E-06 44.8 5.6 20 157-176 216-235 (415)
226 PLN02934 triacylglycerol lipas 94.6 0.052 1.1E-06 47.2 4.3 33 143-175 307-340 (515)
227 PF07519 Tannase: Tannase and 94.3 0.37 8.1E-06 42.6 9.0 60 250-309 353-427 (474)
228 PLN02719 triacylglycerol lipas 94.2 0.073 1.6E-06 46.4 4.4 21 156-176 298-318 (518)
229 PF08237 PE-PPE: PE-PPE domain 94.1 0.32 7E-06 38.2 7.6 78 113-192 2-91 (225)
230 PF05277 DUF726: Protein of un 94.1 0.11 2.4E-06 43.3 5.2 39 154-192 218-262 (345)
231 PLN02753 triacylglycerol lipas 93.9 0.14 3E-06 44.9 5.6 21 156-176 312-332 (531)
232 KOG1202 Animal-type fatty acid 93.9 0.15 3.3E-06 48.9 6.1 96 82-191 2121-2220(2376)
233 PLN02802 triacylglycerol lipas 93.8 0.099 2.1E-06 45.6 4.4 21 157-177 331-351 (509)
234 PLN02847 triacylglycerol lipas 93.7 0.46 1E-05 42.4 8.4 23 154-176 249-271 (633)
235 COG0529 CysC Adenylylsulfate k 93.7 0.91 2E-05 33.9 8.5 40 82-121 20-59 (197)
236 PLN02761 lipase class 3 family 93.6 0.12 2.5E-06 45.3 4.5 21 156-176 294-314 (527)
237 KOG4569 Predicted lipase [Lipi 93.1 0.14 3.1E-06 43.0 4.3 37 138-177 156-192 (336)
238 PF07519 Tannase: Tannase and 92.0 0.2 4.2E-06 44.3 4.0 80 110-190 56-150 (474)
239 PF06441 EHN: Epoxide hydrolas 91.2 0.41 8.8E-06 32.9 4.0 28 70-97 76-105 (112)
240 KOG4540 Putative lipase essent 91.2 0.33 7.2E-06 38.8 3.9 35 143-177 262-297 (425)
241 COG5153 CVT17 Putative lipase 91.2 0.33 7.2E-06 38.8 3.9 35 143-177 262-297 (425)
242 PF06309 Torsin: Torsin; Inte 90.8 2.4 5.2E-05 29.8 7.5 73 82-159 50-125 (127)
243 PF09994 DUF2235: Uncharacteri 90.2 2.8 6.1E-05 34.3 8.8 94 84-177 1-113 (277)
244 KOG1283 Serine carboxypeptidas 89.7 3.6 7.8E-05 33.9 8.6 118 70-190 12-166 (414)
245 KOG1282 Serine carboxypeptidas 87.3 1.6 3.5E-05 38.2 5.7 59 251-309 364-448 (454)
246 KOG2029 Uncharacterized conser 87.1 1.1 2.3E-05 40.0 4.5 50 140-189 507-571 (697)
247 KOG2385 Uncharacterized conser 86.9 1.7 3.6E-05 38.1 5.4 42 153-194 444-491 (633)
248 PF10081 Abhydrolase_9: Alpha/ 85.7 5.1 0.00011 32.5 7.3 38 154-191 107-148 (289)
249 PF09949 DUF2183: Uncharacteri 84.0 11 0.00023 25.4 7.3 82 101-185 12-97 (100)
250 PF03283 PAE: Pectinacetyleste 82.8 5.9 0.00013 33.8 7.0 35 141-175 138-175 (361)
251 KOG4389 Acetylcholinesterase/B 81.1 3.6 7.9E-05 36.0 5.1 105 83-191 134-256 (601)
252 COG4822 CbiK Cobalamin biosynt 79.6 13 0.00027 28.8 6.9 62 83-161 137-199 (265)
253 PF06792 UPF0261: Uncharacteri 79.3 29 0.00064 30.0 9.8 98 86-185 3-125 (403)
254 PF01583 APS_kinase: Adenylyls 79.3 3.4 7.3E-05 30.4 3.8 38 84-121 1-38 (156)
255 PF12242 Eno-Rase_NADH_b: NAD( 78.8 5.6 0.00012 25.0 4.1 41 137-177 17-61 (78)
256 PRK02399 hypothetical protein; 78.6 34 0.00074 29.6 9.9 97 88-185 6-127 (406)
257 COG3673 Uncharacterized conser 75.8 42 0.00092 28.0 9.3 94 83-176 30-142 (423)
258 cd07198 Patatin Patatin-like p 73.7 5.7 0.00012 29.8 3.9 34 145-178 15-48 (172)
259 KOG1532 GTPase XAB1, interacts 72.3 53 0.0011 26.9 11.8 106 83-188 17-158 (366)
260 KOG2170 ATPase of the AAA+ sup 71.3 13 0.00029 30.5 5.5 33 82-114 107-139 (344)
261 cd07225 Pat_PNPLA6_PNPLA7 Pata 70.8 6.7 0.00015 32.6 4.0 62 101-177 3-64 (306)
262 cd07207 Pat_ExoU_VipD_like Exo 70.4 7.5 0.00016 29.7 4.0 33 145-177 16-48 (194)
263 PF00326 Peptidase_S9: Prolyl 70.2 31 0.00068 26.6 7.6 65 83-152 143-208 (213)
264 PF00448 SRP54: SRP54-type pro 69.7 34 0.00075 26.3 7.5 73 103-186 73-148 (196)
265 COG0541 Ffh Signal recognition 69.5 33 0.00071 30.0 7.7 73 103-186 172-247 (451)
266 cd07210 Pat_hypo_W_succinogene 69.5 8.9 0.00019 30.2 4.3 33 145-177 17-49 (221)
267 PRK10279 hypothetical protein; 69.2 7.2 0.00016 32.3 3.9 33 145-177 22-54 (300)
268 PRK12467 peptide synthase; Pro 69.0 21 0.00046 41.1 8.4 95 85-186 3693-3791(3956)
269 cd03818 GT1_ExpC_like This fam 67.9 28 0.00061 30.1 7.5 37 87-127 2-38 (396)
270 cd07227 Pat_Fungal_NTE1 Fungal 65.6 10 0.00023 30.8 4.1 33 145-177 27-59 (269)
271 COG1752 RssA Predicted esteras 64.7 9.8 0.00021 31.7 3.9 33 145-177 28-60 (306)
272 cd07228 Pat_NTE_like_bacteria 64.0 15 0.00032 27.6 4.4 34 145-178 17-50 (175)
273 COG3007 Uncharacterized paraqu 63.6 46 0.00099 27.4 7.0 52 140-191 21-80 (398)
274 COG3340 PepE Peptidase E [Amin 63.5 22 0.00048 27.6 5.1 40 83-122 31-71 (224)
275 smart00827 PKS_AT Acyl transfe 63.0 11 0.00023 31.2 3.9 32 145-176 71-102 (298)
276 PF00698 Acyl_transf_1: Acyl t 62.6 6.7 0.00014 32.8 2.5 32 145-176 73-104 (318)
277 COG1087 GalE UDP-glucose 4-epi 62.5 84 0.0018 26.2 8.4 88 102-189 13-119 (329)
278 cd01714 ETF_beta The electron 62.3 72 0.0016 24.7 8.6 71 105-186 68-145 (202)
279 cd07205 Pat_PNPLA6_PNPLA7_NTE1 61.9 17 0.00036 27.3 4.4 34 144-177 16-49 (175)
280 COG3494 Uncharacterized protei 61.5 41 0.00089 26.9 6.3 58 103-162 18-76 (279)
281 PRK05282 (alpha)-aspartyl dipe 61.3 38 0.00081 27.0 6.3 40 83-122 30-70 (233)
282 PF10605 3HBOH: 3HB-oligomer h 61.2 8.2 0.00018 34.9 2.9 34 158-191 287-322 (690)
283 PF05673 DUF815: Protein of un 61.1 54 0.0012 26.3 7.1 58 87-161 54-111 (249)
284 cd07209 Pat_hypo_Ecoli_Z1214_l 60.8 14 0.0003 29.0 3.9 34 145-178 15-48 (215)
285 TIGR03131 malonate_mdcH malona 60.4 13 0.00028 30.7 3.9 31 146-176 66-96 (295)
286 COG1073 Hydrolases of the alph 58.9 0.46 1E-05 38.8 -5.0 108 83-191 87-200 (299)
287 TIGR03709 PPK2_rel_1 polyphosp 58.9 14 0.00029 30.0 3.5 41 82-122 53-93 (264)
288 TIGR01425 SRP54_euk signal rec 58.8 61 0.0013 28.5 7.6 70 106-186 175-247 (429)
289 PTZ00445 p36-lilke protein; Pr 58.6 53 0.0012 25.6 6.4 65 101-166 30-102 (219)
290 cd07224 Pat_like Patatin-like 58.2 17 0.00036 28.9 4.0 34 145-178 16-51 (233)
291 cd07230 Pat_TGL4-5_like Triacy 58.0 11 0.00024 33.0 3.1 35 144-178 89-123 (421)
292 TIGR00365 monothiol glutaredox 57.1 55 0.0012 21.7 7.2 81 83-179 11-92 (97)
293 PF01656 CbiA: CobQ/CobB/MinD/ 56.7 14 0.0003 28.1 3.2 36 87-122 1-36 (195)
294 PF03205 MobB: Molybdopterin g 56.7 18 0.0004 26.0 3.7 43 86-128 1-43 (140)
295 TIGR03707 PPK2_P_aer polyphosp 56.7 15 0.00033 29.1 3.4 40 83-122 29-68 (230)
296 PRK14729 miaA tRNA delta(2)-is 56.6 1.1E+02 0.0024 25.5 8.5 74 86-164 5-101 (300)
297 cd04951 GT1_WbdM_like This fam 55.8 94 0.002 26.0 8.5 38 86-123 2-39 (360)
298 TIGR00128 fabD malonyl CoA-acy 55.1 16 0.00036 29.9 3.7 29 148-176 74-103 (290)
299 PRK14974 cell division protein 55.0 1.1E+02 0.0024 25.9 8.4 68 108-186 217-287 (336)
300 COG1856 Uncharacterized homolo 54.6 36 0.00077 26.7 4.9 79 105-186 102-186 (275)
301 PRK07933 thymidylate kinase; V 54.1 32 0.0007 26.9 4.9 41 87-127 2-42 (213)
302 COG1506 DAP2 Dipeptidyl aminop 53.1 70 0.0015 29.9 7.6 65 83-152 550-615 (620)
303 PF08484 Methyltransf_14: C-me 52.9 61 0.0013 24.0 5.9 48 140-188 54-102 (160)
304 KOG0635 Adenosine 5'-phosphosu 52.9 42 0.0009 24.6 4.7 39 83-121 29-67 (207)
305 cd07229 Pat_TGL3_like Triacylg 52.4 17 0.00037 31.4 3.3 36 144-179 99-134 (391)
306 KOG0781 Signal recognition par 52.4 68 0.0015 28.6 6.7 87 88-186 442-538 (587)
307 cd01983 Fer4_NifH The Fer4_Nif 52.3 25 0.00055 22.6 3.7 33 88-120 2-34 (99)
308 cd07232 Pat_PLPL Patain-like p 51.9 15 0.00032 32.0 3.0 36 144-179 83-118 (407)
309 cd07208 Pat_hypo_Ecoli_yjju_li 50.7 24 0.00052 28.6 3.9 34 145-178 15-49 (266)
310 PRK12724 flagellar biosynthesi 50.3 1.8E+02 0.0039 25.7 9.2 75 104-186 290-367 (432)
311 TIGR00959 ffh signal recogniti 49.5 1.5E+02 0.0033 26.2 8.7 71 105-186 174-247 (428)
312 COG0552 FtsY Signal recognitio 49.2 1.5E+02 0.0033 25.0 8.1 85 93-186 202-292 (340)
313 PF03976 PPK2: Polyphosphate k 49.0 8.2 0.00018 30.5 0.9 40 83-122 29-68 (228)
314 TIGR03127 RuMP_HxlB 6-phospho 49.0 64 0.0014 24.2 5.7 79 87-168 32-112 (179)
315 COG4088 Predicted nucleotide k 48.8 24 0.00052 27.5 3.2 36 86-121 2-37 (261)
316 cd07231 Pat_SDP1-like Sugar-De 48.6 19 0.00042 30.0 2.9 34 144-177 84-117 (323)
317 cd07204 Pat_PNPLA_like Patatin 48.1 31 0.00068 27.6 4.1 33 146-178 17-53 (243)
318 PRK10867 signal recognition pa 48.1 2E+02 0.0043 25.5 9.8 69 106-185 176-247 (433)
319 KOG1209 1-Acyl dihydroxyaceton 47.0 41 0.0009 26.3 4.2 37 83-122 5-41 (289)
320 PF04084 ORC2: Origin recognit 46.8 1.2E+02 0.0026 25.7 7.4 44 143-186 123-175 (326)
321 cd03409 Chelatase_Class_II Cla 46.6 83 0.0018 20.7 5.6 60 86-161 2-65 (101)
322 KOG0780 Signal recognition par 46.4 1.2E+02 0.0027 26.2 7.2 71 105-186 175-248 (483)
323 PRK13230 nitrogenase reductase 46.2 33 0.00071 28.1 4.0 40 86-126 3-42 (279)
324 cd03413 CbiK_C Anaerobic cobal 46.1 91 0.002 21.0 6.0 60 85-161 2-62 (103)
325 cd07206 Pat_TGL3-4-5_SDP1 Tria 45.8 31 0.00067 28.6 3.7 34 145-178 86-119 (298)
326 PLN02748 tRNA dimethylallyltra 45.7 1.5E+02 0.0033 26.6 8.0 77 83-164 20-120 (468)
327 PRK00889 adenylylsulfate kinas 45.6 46 0.00099 24.8 4.5 38 84-121 3-40 (175)
328 COG1763 MobB Molybdopterin-gua 45.3 88 0.0019 23.2 5.7 41 85-125 2-42 (161)
329 TIGR02069 cyanophycinase cyano 44.9 60 0.0013 26.1 5.2 39 83-122 27-66 (250)
330 cd07222 Pat_PNPLA4 Patatin-lik 44.7 31 0.00067 27.7 3.6 31 145-175 16-50 (246)
331 PLN02840 tRNA dimethylallyltra 44.7 1.7E+02 0.0036 25.8 8.0 76 83-163 19-118 (421)
332 PF13207 AAA_17: AAA domain; P 44.3 45 0.00098 22.8 4.0 31 87-121 1-32 (121)
333 cd07220 Pat_PNPLA2 Patatin-lik 44.1 37 0.00079 27.4 3.9 34 145-178 21-58 (249)
334 TIGR02884 spore_pdaA delta-lac 43.7 34 0.00073 27.0 3.6 36 84-120 186-221 (224)
335 CHL00175 minD septum-site dete 43.6 52 0.0011 26.9 4.9 39 84-122 15-53 (281)
336 PRK00652 lpxK tetraacyldisacch 43.3 2E+02 0.0044 24.3 8.6 42 86-128 50-93 (325)
337 cd01819 Patatin_and_cPLA2 Pata 43.0 38 0.00082 24.8 3.6 30 145-174 15-46 (155)
338 PF05724 TPMT: Thiopurine S-me 42.8 43 0.00093 26.3 4.0 32 84-122 37-68 (218)
339 PRK06731 flhF flagellar biosyn 42.7 1.9E+02 0.0041 23.7 9.6 71 105-186 145-219 (270)
340 PRK06696 uridine kinase; Valid 42.6 57 0.0012 25.6 4.7 39 82-120 19-57 (223)
341 TIGR00064 ftsY signal recognit 42.3 1.9E+02 0.0041 23.7 7.9 71 108-186 149-225 (272)
342 cd02037 MRP-like MRP (Multiple 42.1 50 0.0011 24.5 4.2 36 87-122 2-37 (169)
343 PRK14340 (dimethylallyl)adenos 42.1 1.9E+02 0.0041 25.8 8.2 93 88-184 9-106 (445)
344 cd02036 MinD Bacterial cell di 41.9 42 0.00092 24.9 3.8 36 87-122 2-37 (179)
345 TIGR02764 spore_ybaN_pdaB poly 41.8 24 0.00052 26.9 2.5 36 85-120 152-188 (191)
346 TIGR03371 cellulose_yhjQ cellu 41.6 42 0.00092 26.6 4.0 40 86-125 3-42 (246)
347 TIGR02873 spore_ylxY probable 41.2 33 0.00071 28.0 3.2 34 85-120 231-264 (268)
348 PRK00091 miaA tRNA delta(2)-is 40.6 1.6E+02 0.0034 24.7 7.2 72 84-159 3-98 (307)
349 PRK10824 glutaredoxin-4; Provi 40.6 1.2E+02 0.0027 21.0 7.7 80 83-178 14-94 (115)
350 PRK09273 hypothetical protein; 40.4 1.8E+02 0.0038 22.8 8.3 79 100-188 17-95 (211)
351 cd01521 RHOD_PspE2 Member of t 40.2 97 0.0021 20.9 5.1 35 82-120 63-97 (110)
352 cd02033 BchX Chlorophyllide re 39.5 57 0.0012 27.6 4.4 40 83-122 29-68 (329)
353 PF03853 YjeF_N: YjeF-related 39.5 39 0.00084 25.3 3.2 36 82-119 23-58 (169)
354 COG0084 TatD Mg-dependent DNas 39.5 1E+02 0.0022 25.0 5.6 54 137-190 13-67 (256)
355 PRK14331 (dimethylallyl)adenos 39.4 2.5E+02 0.0055 24.8 8.7 93 88-184 3-100 (437)
356 cd07221 Pat_PNPLA3 Patatin-lik 39.4 46 0.001 26.8 3.8 21 158-178 34-54 (252)
357 cd05005 SIS_PHI Hexulose-6-pho 38.8 1.5E+02 0.0032 22.2 6.4 78 88-168 36-115 (179)
358 PRK13256 thiopurine S-methyltr 38.7 28 0.0006 27.5 2.4 29 87-122 46-74 (226)
359 cd07218 Pat_iPLA2 Calcium-inde 38.5 47 0.001 26.7 3.7 20 159-178 33-52 (245)
360 cd02034 CooC The accessory pro 38.3 56 0.0012 22.6 3.6 34 88-121 2-35 (116)
361 cd03416 CbiX_SirB_N Sirohydroc 37.6 77 0.0017 21.0 4.2 27 86-112 2-28 (101)
362 cd02040 NifH NifH gene encodes 37.5 53 0.0012 26.5 4.0 39 87-126 4-42 (270)
363 PLN02924 thymidylate kinase 37.3 70 0.0015 25.2 4.4 41 83-123 14-54 (220)
364 cd07212 Pat_PNPLA9 Patatin-lik 37.2 30 0.00066 28.9 2.5 19 159-177 35-53 (312)
365 COG0218 Predicted GTPase [Gene 37.2 93 0.002 24.1 4.8 56 250-308 135-198 (200)
366 KOG2872 Uroporphyrinogen decar 37.1 96 0.0021 25.5 5.0 30 84-122 252-281 (359)
367 TIGR00176 mobB molybdopterin-g 37.1 60 0.0013 23.9 3.8 38 88-125 2-39 (155)
368 PRK14337 (dimethylallyl)adenos 37.0 2.5E+02 0.0055 25.0 8.3 94 88-186 6-104 (446)
369 KOG1252 Cystathionine beta-syn 37.0 2.6E+02 0.0057 23.7 9.0 38 83-123 210-249 (362)
370 COG3727 Vsr DNA G:T-mismatch r 36.7 1.3E+02 0.0028 21.4 4.9 37 83-119 56-114 (150)
371 PF14606 Lipase_GDSL_3: GDSL-l 36.5 1.3E+02 0.0027 22.9 5.4 25 137-161 74-99 (178)
372 TIGR01007 eps_fam capsular exo 36.5 73 0.0016 24.5 4.5 38 85-122 18-55 (204)
373 TIGR01968 minD_bact septum sit 36.4 69 0.0015 25.6 4.5 38 86-123 3-40 (261)
374 cd02032 Bchl_like This family 36.4 52 0.0011 26.6 3.8 34 92-125 7-40 (267)
375 TIGR01969 minD_arch cell divis 36.4 66 0.0014 25.6 4.3 38 86-123 2-39 (251)
376 TIGR01287 nifH nitrogenase iro 35.9 74 0.0016 25.9 4.6 38 89-126 4-41 (275)
377 PRK10416 signal recognition pa 35.8 2.7E+02 0.0058 23.5 7.9 69 110-186 193-267 (318)
378 COG0331 FabD (acyl-carrier-pro 35.6 45 0.00097 27.9 3.2 22 154-175 83-104 (310)
379 PF01118 Semialdhyde_dh: Semia 35.6 49 0.0011 23.0 3.0 33 157-189 1-34 (121)
380 PHA02518 ParA-like protein; Pr 35.5 75 0.0016 24.4 4.4 39 87-125 3-41 (211)
381 COG1448 TyrB Aspartate/tyrosin 35.4 3E+02 0.0064 23.9 8.9 88 83-188 170-263 (396)
382 COG1255 Uncharacterized protei 35.2 49 0.0011 22.9 2.7 22 101-122 24-45 (129)
383 PRK03846 adenylylsulfate kinas 35.2 71 0.0015 24.5 4.2 38 83-120 22-59 (198)
384 TIGR03018 pepcterm_TyrKin exop 35.0 1E+02 0.0022 23.8 5.0 40 83-122 34-74 (207)
385 PF14253 AbiH: Bacteriophage a 34.6 23 0.00049 28.8 1.4 15 154-168 233-247 (270)
386 PRK13973 thymidylate kinase; P 34.6 90 0.002 24.3 4.7 38 86-123 4-41 (213)
387 PF03575 Peptidase_S51: Peptid 34.5 79 0.0017 23.1 4.1 21 102-122 2-22 (154)
388 PF09370 TIM-br_sig_trns: TIM- 34.5 1.1E+02 0.0023 24.9 4.9 82 104-188 161-248 (268)
389 KOG0855 Alkyl hydroperoxide re 34.5 1.5E+02 0.0034 22.1 5.3 60 61-121 69-132 (211)
390 cd03146 GAT1_Peptidase_E Type 34.1 1.6E+02 0.0035 22.9 6.0 40 83-123 30-70 (212)
391 COG0489 Mrp ATPases involved i 33.8 1.1E+02 0.0025 24.8 5.3 47 83-129 56-102 (265)
392 PRK14325 (dimethylallyl)adenos 33.8 2.8E+02 0.0061 24.6 8.1 93 88-184 6-103 (444)
393 cd03414 CbiX_SirB_C Sirohydroc 33.8 1.3E+02 0.0029 20.5 5.0 27 86-112 3-29 (117)
394 PRK13111 trpA tryptophan synth 33.7 2.1E+02 0.0047 23.2 6.7 61 102-179 106-167 (258)
395 PF03721 UDPG_MGDP_dh_N: UDP-g 33.7 59 0.0013 24.7 3.4 29 89-122 4-32 (185)
396 PF02606 LpxK: Tetraacyldisacc 33.4 1.1E+02 0.0025 25.8 5.3 44 86-130 36-81 (326)
397 COG4425 Predicted membrane pro 33.3 1.7E+02 0.0038 25.9 6.2 51 141-191 382-436 (588)
398 PTZ00062 glutaredoxin; Provisi 33.2 2.3E+02 0.0051 22.0 7.9 83 83-181 112-195 (204)
399 TIGR00089 RNA modification enz 33.2 3.4E+02 0.0074 23.9 8.5 93 88-184 2-97 (429)
400 PF11713 Peptidase_C80: Peptid 33.1 16 0.00035 26.9 0.3 15 154-168 102-116 (157)
401 cd07211 Pat_PNPLA8 Patatin-lik 32.9 50 0.0011 27.5 3.2 17 159-175 44-60 (308)
402 PF10686 DUF2493: Protein of u 32.7 1.1E+02 0.0024 19.0 3.9 33 83-119 30-63 (71)
403 TIGR03708 poly_P_AMP_trns poly 32.6 72 0.0016 28.7 4.2 42 82-123 37-78 (493)
404 TIGR02026 BchE magnesium-proto 32.6 1.4E+02 0.003 27.0 6.1 23 103-125 26-49 (497)
405 PRK05368 homoserine O-succinyl 32.5 70 0.0015 26.6 3.8 34 140-176 121-154 (302)
406 TIGR01281 DPOR_bchL light-inde 32.5 73 0.0016 25.8 4.0 34 92-125 7-40 (268)
407 PRK13236 nitrogenase reductase 32.4 88 0.0019 25.9 4.5 42 87-128 8-49 (296)
408 cd03131 GATase1_HTS Type 1 glu 32.3 24 0.00051 26.6 1.0 37 139-178 83-119 (175)
409 PLN02733 phosphatidylcholine-s 32.3 31 0.00066 30.5 1.9 52 254-308 370-421 (440)
410 PF01738 DLH: Dienelactone hyd 32.1 2.3E+02 0.005 21.9 6.7 68 84-151 145-215 (218)
411 COG0031 CysK Cysteine synthase 32.0 3E+02 0.0066 23.0 9.7 97 86-188 170-291 (300)
412 KOG4022 Dihydropteridine reduc 31.7 2.2E+02 0.0048 21.3 6.6 27 102-128 16-42 (236)
413 COG0426 FpaA Uncharacterized f 31.6 3.5E+02 0.0076 23.6 8.0 73 85-179 249-330 (388)
414 KOG2805 tRNA (5-methylaminomet 31.6 1E+02 0.0022 25.7 4.5 61 84-150 6-66 (377)
415 COG0621 MiaB 2-methylthioadeni 31.6 2.9E+02 0.0063 24.6 7.5 85 88-184 5-99 (437)
416 cd02117 NifH_like This family 31.5 1E+02 0.0022 24.0 4.5 35 92-126 7-41 (212)
417 PF01580 FtsK_SpoIIIE: FtsK/Sp 31.3 1.2E+02 0.0026 23.3 4.9 39 88-126 41-83 (205)
418 PRK00726 murG undecaprenyldiph 31.2 3.2E+02 0.007 23.0 9.2 35 87-123 5-39 (357)
419 PRK09936 hypothetical protein; 31.1 1.8E+02 0.0038 24.1 5.7 28 100-127 38-65 (296)
420 TIGR03029 EpsG chain length de 31.0 1.2E+02 0.0025 24.7 5.0 39 83-121 102-140 (274)
421 cd08162 MPP_PhoA_N Synechococc 31.0 1.3E+02 0.0028 25.3 5.2 45 142-186 195-239 (313)
422 TIGR00682 lpxK tetraacyldisacc 30.9 1.3E+02 0.0029 25.2 5.3 42 86-128 29-72 (311)
423 PF08433 KTI12: Chromatin asso 30.9 60 0.0013 26.5 3.2 40 86-125 2-41 (270)
424 PRK06490 glutamine amidotransf 30.9 2.8E+02 0.006 22.2 10.1 83 84-174 8-103 (239)
425 PRK00923 sirohydrochlorin coba 30.9 1.9E+02 0.0041 20.2 6.4 62 85-161 3-66 (126)
426 cd02042 ParA ParA and ParB of 30.8 1E+02 0.0022 20.4 4.0 34 89-122 4-37 (104)
427 CHL00200 trpA tryptophan synth 30.8 2.2E+02 0.0048 23.2 6.4 49 102-167 108-157 (263)
428 PF09419 PGP_phosphatase: Mito 30.8 2.1E+02 0.0045 21.5 5.7 53 108-166 35-88 (168)
429 TIGR00521 coaBC_dfp phosphopan 30.7 3.7E+02 0.008 23.5 8.9 92 85-177 113-225 (390)
430 TIGR02016 BchX chlorophyllide 30.7 82 0.0018 26.1 4.0 35 87-122 3-37 (296)
431 TIGR00455 apsK adenylylsulfate 30.3 2.4E+02 0.0051 21.2 7.4 39 83-121 16-54 (184)
432 PRK14336 (dimethylallyl)adenos 30.2 3.5E+02 0.0076 23.8 8.0 93 88-184 4-101 (418)
433 PLN03050 pyridoxine (pyridoxam 30.1 1.3E+02 0.0027 24.3 4.9 34 85-120 61-94 (246)
434 PRK14329 (dimethylallyl)adenos 29.9 4E+02 0.0087 23.9 8.4 95 88-186 26-125 (467)
435 PLN02757 sirohydrochlorine fer 29.3 1.5E+02 0.0033 21.8 4.8 64 84-161 14-78 (154)
436 PRK07667 uridine kinase; Provi 29.2 1.2E+02 0.0025 23.2 4.4 42 83-124 15-56 (193)
437 TIGR02540 gpx7 putative glutat 29.2 2.2E+02 0.0048 20.5 8.1 62 64-127 5-69 (153)
438 PLN02204 diacylglycerol kinase 29.1 4.4E+02 0.0095 24.6 8.4 36 83-118 159-195 (601)
439 COG0482 TrmU Predicted tRNA(5- 28.9 1.5E+02 0.0031 25.4 5.1 59 84-150 4-62 (356)
440 PRK13768 GTPase; Provisional 28.9 85 0.0018 25.3 3.8 35 87-121 4-38 (253)
441 COG2240 PdxK Pyridoxal/pyridox 28.9 2.6E+02 0.0056 23.1 6.3 92 90-193 11-116 (281)
442 PRK10751 molybdopterin-guanine 28.6 1.2E+02 0.0025 22.9 4.1 43 84-126 5-47 (173)
443 COG5441 Uncharacterized conser 28.5 3.5E+02 0.0076 22.6 9.0 98 86-184 3-122 (401)
444 PHA02114 hypothetical protein 28.2 1.1E+02 0.0024 20.3 3.4 35 84-120 82-116 (127)
445 PF03033 Glyco_transf_28: Glyc 28.2 53 0.0011 23.2 2.3 34 87-122 2-35 (139)
446 PRK13512 coenzyme A disulfide 28.1 2E+02 0.0043 25.5 6.2 45 141-188 134-179 (438)
447 PF01734 Patatin: Patatin-like 28.1 67 0.0015 23.9 3.0 20 158-177 29-48 (204)
448 PRK13869 plasmid-partitioning 27.9 1.1E+02 0.0024 26.8 4.5 41 85-125 122-162 (405)
449 PF13380 CoA_binding_2: CoA bi 27.9 2.1E+02 0.0045 19.7 6.9 31 92-123 7-37 (116)
450 COG0505 CarA Carbamoylphosphat 27.8 1.4E+02 0.0029 25.5 4.7 65 103-174 191-267 (368)
451 PLN02412 probable glutathione 27.7 2.2E+02 0.0047 21.1 5.6 59 63-123 11-72 (167)
452 PF02230 Abhydrolase_2: Phosph 27.7 2.4E+02 0.0051 21.9 6.1 58 84-148 155-213 (216)
453 PF10566 Glyco_hydro_97: Glyco 27.7 2.7E+02 0.006 22.8 6.4 66 101-167 33-98 (273)
454 PTZ00056 glutathione peroxidas 27.7 2.9E+02 0.0062 21.3 8.2 61 60-122 18-81 (199)
455 COG2185 Sbm Methylmalonyl-CoA 27.6 2.4E+02 0.0053 20.5 8.0 39 82-122 10-49 (143)
456 PRK13235 nifH nitrogenase redu 27.6 92 0.002 25.4 3.8 38 87-125 4-41 (274)
457 cd07213 Pat17_PNPLA8_PNPLA9_li 27.5 1.1E+02 0.0024 25.2 4.3 19 159-177 37-55 (288)
458 cd00951 KDGDH 5-dehydro-4-deox 27.3 3.6E+02 0.0077 22.3 8.4 83 101-191 22-106 (289)
459 COG4213 XylF ABC-type xylose t 26.9 2.6E+02 0.0057 23.5 6.0 76 83-164 80-161 (341)
460 cd01520 RHOD_YbbB Member of th 26.8 1.4E+02 0.0031 20.8 4.3 34 82-120 85-118 (128)
461 PRK13255 thiopurine S-methyltr 26.8 90 0.002 24.5 3.5 16 106-121 52-67 (218)
462 TIGR03453 partition_RepA plasm 26.7 1.1E+02 0.0024 26.5 4.4 41 85-125 105-145 (387)
463 PRK06171 sorbitol-6-phosphate 26.7 2.4E+02 0.0052 22.5 6.2 33 87-123 11-43 (266)
464 cd07219 Pat_PNPLA1 Patatin-lik 26.6 94 0.002 26.8 3.7 18 159-176 47-64 (382)
465 cd03785 GT1_MurG MurG is an N- 26.6 85 0.0018 26.4 3.6 34 88-121 2-35 (350)
466 KOG2214 Predicted esterase of 26.6 23 0.0005 31.4 0.2 40 145-184 191-231 (543)
467 COG0159 TrpA Tryptophan syntha 26.4 3E+02 0.0066 22.5 6.3 50 102-168 111-161 (265)
468 TIGR03840 TMPT_Se_Te thiopurin 26.3 89 0.0019 24.4 3.4 16 106-121 49-64 (213)
469 COG3887 Predicted signaling pr 26.1 1.7E+02 0.0037 26.9 5.3 49 139-188 322-376 (655)
470 PRK13886 conjugal transfer pro 26.0 1.4E+02 0.0031 23.9 4.4 37 86-122 4-40 (241)
471 TIGR01425 SRP54_euk signal rec 26.0 1.1E+02 0.0024 27.0 4.1 39 83-121 98-136 (429)
472 COG3946 VirJ Type IV secretory 25.7 1.9E+02 0.0041 25.3 5.2 103 83-188 47-155 (456)
473 PRK01906 tetraacyldisaccharide 25.7 1.7E+02 0.0036 25.0 5.0 42 86-128 57-100 (338)
474 PRK10818 cell division inhibit 25.6 1.3E+02 0.0028 24.4 4.3 37 86-122 4-40 (270)
475 cd08186 Fe-ADH8 Iron-containin 25.6 4.5E+02 0.0097 22.8 7.8 65 86-162 28-92 (383)
476 CHL00072 chlL photochlorophyll 25.4 1.1E+02 0.0023 25.4 3.8 37 90-126 5-41 (290)
477 COG3580 Uncharacterized protei 25.3 3.6E+02 0.0078 22.6 6.5 38 84-123 203-240 (351)
478 PRK13705 plasmid-partitioning 25.3 1.4E+02 0.003 26.0 4.6 42 85-126 107-149 (388)
479 COG3596 Predicted GTPase [Gene 25.2 3.9E+02 0.0085 22.1 6.6 19 112-130 85-103 (296)
480 TIGR02193 heptsyl_trn_I lipopo 25.2 1.7E+02 0.0038 24.3 5.2 37 83-119 178-217 (319)
481 PRK14338 (dimethylallyl)adenos 25.0 5E+02 0.011 23.2 8.1 93 88-184 23-121 (459)
482 PRK05541 adenylylsulfate kinas 25.0 1.1E+02 0.0025 22.7 3.7 38 83-120 5-42 (176)
483 cd01523 RHOD_Lact_B Member of 24.9 1.3E+02 0.0027 19.8 3.5 29 82-116 60-88 (100)
484 KOG4231 Intracellular membrane 24.9 3.1E+02 0.0067 24.9 6.4 19 159-177 453-471 (763)
485 COG3562 KpsS Capsule polysacch 24.8 4.4E+02 0.0096 22.5 7.2 78 85-167 14-94 (403)
486 PHA02519 plasmid partition pro 24.6 1.8E+02 0.0038 25.4 5.1 41 86-126 108-149 (387)
487 PLN03019 carbonic anhydrase 24.6 1.5E+02 0.0032 25.0 4.4 30 141-173 203-232 (330)
488 cd02038 FleN-like FleN is a me 24.4 1.7E+02 0.0037 20.8 4.4 37 87-123 2-38 (139)
489 KOG1200 Mitochondrial/plastidi 24.4 3.5E+02 0.0075 21.2 7.4 32 87-122 16-47 (256)
490 COG1576 Uncharacterized conser 24.4 2.7E+02 0.0058 20.6 5.1 50 113-175 67-117 (155)
491 PRK08339 short chain dehydroge 24.3 3.8E+02 0.0081 21.5 7.5 31 87-121 10-40 (263)
492 PRK13185 chlL protochlorophyll 24.2 1.7E+02 0.0036 23.7 4.8 35 92-126 9-43 (270)
493 COG0300 DltE Short-chain dehyd 24.2 4E+02 0.0087 21.8 7.1 31 88-122 9-39 (265)
494 COG3640 CooC CO dehydrogenase 24.2 1.4E+02 0.003 24.0 3.9 35 87-121 2-37 (255)
495 PRK09072 short chain dehydroge 24.1 1.4E+02 0.0029 24.0 4.2 32 87-122 7-38 (263)
496 TIGR03249 KdgD 5-dehydro-4-deo 24.0 4.2E+02 0.0091 22.0 13.0 84 100-191 26-111 (296)
497 cd02027 APSK Adenosine 5'-phos 24.0 1E+02 0.0022 22.4 3.1 34 87-120 1-34 (149)
498 TIGR02816 pfaB_fam PfaB family 23.9 1E+02 0.0022 28.1 3.6 25 153-177 262-286 (538)
499 cd07409 MPP_CD73_N CD73 ecto-5 23.8 4.1E+02 0.0089 21.8 7.4 49 137-186 165-213 (281)
500 PF13439 Glyco_transf_4: Glyco 23.6 2.8E+02 0.0061 19.9 8.8 25 100-124 16-40 (177)
No 1
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=100.00 E-value=3e-33 Score=203.91 Aligned_cols=252 Identities=65% Similarity=1.090 Sum_probs=231.3
Q ss_pred ceEEEEEeCCCCceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHH
Q 020932 60 KQQELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWRE 139 (319)
Q Consensus 60 ~~~~~~~~~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~ 139 (319)
..+.+.+++..+.++.+.....++...+|++||+-++........++..|++.|+.++.+|++|.|+|++...+..+...
T Consensus 9 ~~~~ivi~n~~ne~lvg~lh~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~e 88 (269)
T KOG4667|consen 9 IAQKIVIPNSRNEKLVGLLHETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTE 88 (269)
T ss_pred eeeEEEeccCCCchhhcceeccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccch
Confidence 66888888888888988888899999999999999998777788999999999999999999999999999988888999
Q ss_pred HhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhccccccccC
Q 020932 140 ADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNK 219 (319)
Q Consensus 140 ~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (319)
++|+..+++++...+.---+++|||-||.+++.+|.+++++.-+|.+++.++....+.++++..++..+...++.+...+
T Consensus 89 adDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~Gfid~~~r 168 (269)
T KOG4667|consen 89 ADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQGFIDVGPR 168 (269)
T ss_pred HHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhCCceecCcc
Confidence 99999999999765433347999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCcccHHHHH
Q 020932 220 TGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELV 299 (319)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 299 (319)
.....+.+..+.+++++..+.......+..+||+|-+||..|.+||.+.+.++++.+++.++.++||++|.+..+..+..
T Consensus 169 kG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~iIEgADHnyt~~q~~l~ 248 (269)
T KOG4667|consen 169 KGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQLV 248 (269)
T ss_pred cCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccCCceEEecCCCcCccchhhhHh
Confidence 99999999999999999999999998898999999999999999999999999999999999999999999987777777
Q ss_pred HHHHHHHHhhcC
Q 020932 300 SVVLDFVKASLK 311 (319)
Q Consensus 300 ~~i~~fl~~~~~ 311 (319)
.....|..-...
T Consensus 249 ~lgl~f~k~r~n 260 (269)
T KOG4667|consen 249 SLGLEFIKTRIN 260 (269)
T ss_pred hhcceeEEeeec
Confidence 777777665443
No 2
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=6.8e-32 Score=227.06 Aligned_cols=254 Identities=19% Similarity=0.255 Sum_probs=172.6
Q ss_pred cccceEEEEEeCCCCceEEEEEEeCC---CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCC
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY 133 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~ 133 (319)
.++..++..+.+.||.++.+..+.|. .+++|||+||++++.. ..|..+++.|+++||+|+++|+||||.|++....
T Consensus 57 ~~~~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~-~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 135 (349)
T PLN02385 57 SGIKTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCT-FFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGY 135 (349)
T ss_pred cCcceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccc-hHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCC
Confidence 34556666777789999998887663 4689999999998864 3578899999999999999999999999875432
Q ss_pred -CChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhh-hhchHHHHH
Q 020932 134 -GNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIED-RLGKDYMEK 207 (319)
Q Consensus 134 -~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~-~~~~~~~~~ 207 (319)
.+++.+++|+.++++.+... ...+++|+||||||.+++.++.++|+ ++++|+++|.......... .....+...
T Consensus 136 ~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~ 215 (349)
T PLN02385 136 IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILIL 215 (349)
T ss_pred cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHH
Confidence 47788899999999988643 23479999999999999999999998 9999999986543221100 000001000
Q ss_pred hhh---cc-ccccccCCC---------------cceee--eehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCc
Q 020932 208 IMQ---DG-FIDVKNKTG---------------DVEYR--VTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPL 266 (319)
Q Consensus 208 ~~~---~~-~~~~~~~~~---------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 266 (319)
+.. .. ......... ...+. .........+...........++++|+|+|+|++|.++|+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 216 LANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 000 00 000000000 00000 0000000111100011111235799999999999999999
Q ss_pred chHHHHHhhC--CCCeEEEecCCCccCc-ccHHH----HHHHHHHHHHhhcC
Q 020932 267 QDAHEFDKII--PNHKLHVVEGANHGYT-NHQAE----LVSVVLDFVKASLK 311 (319)
Q Consensus 267 ~~~~~~~~~~--~~~~~~~~~~~gH~~~-~~~~~----~~~~i~~fl~~~~~ 311 (319)
+.++.+++.+ +++++++++++||.++ +++++ +.+.|.+||+++..
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 9999999887 4689999999999976 45554 88899999998764
No 3
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.5e-31 Score=220.84 Aligned_cols=256 Identities=14% Similarity=0.190 Sum_probs=172.4
Q ss_pred ccceEEEEEeCCCCceEEEEEEeCC----CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC-
Q 020932 58 AVKQQELVIPNKYGERLVGVLHDAE----SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ- 132 (319)
Q Consensus 58 ~~~~~~~~~~~~dg~~l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~- 132 (319)
++..+...+.+.||.++.+..+.+. .+++|||+||++.+.. +.+..++..|+++||+|+++|+||||.|++...
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~-~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~ 107 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDIS-WTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAY 107 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcc-eehhHHHHHHHhCCCEEEEecCCCCCCCCCcccc
Confidence 4566677888889999999766542 4567999999987653 457788889999999999999999999975443
Q ss_pred CCChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhc-h---HH
Q 020932 133 YGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLG-K---DY 204 (319)
Q Consensus 133 ~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~-~---~~ 204 (319)
..+++.+++|+.++++.+... ...+++|+||||||.+++.++.++|+ |+++|+++|............. . .+
T Consensus 108 ~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 187 (330)
T PLN02298 108 VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTF 187 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHH
Confidence 346788899999999999764 23479999999999999999999998 9999999987644322110000 0 01
Q ss_pred HHHhhhccccccccC-CCc---------------ceeee--ehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCc
Q 020932 205 MEKIMQDGFIDVKNK-TGD---------------VEYRV--TEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPL 266 (319)
Q Consensus 205 ~~~~~~~~~~~~~~~-~~~---------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 266 (319)
...+........... ... ..+.. ........+............+++|+|+++|++|.++|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~ 267 (330)
T PLN02298 188 VARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDP 267 (330)
T ss_pred HHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCH
Confidence 111110000000000 000 00000 000000000000001111225689999999999999999
Q ss_pred chHHHHHhhCC--CCeEEEecCCCccCc-ccH----HHHHHHHHHHHHhhcCCCC
Q 020932 267 QDAHEFDKIIP--NHKLHVVEGANHGYT-NHQ----AELVSVVLDFVKASLKQDH 314 (319)
Q Consensus 267 ~~~~~~~~~~~--~~~~~~~~~~gH~~~-~~~----~~~~~~i~~fl~~~~~~~~ 314 (319)
+.++++++.++ +++++++++++|.++ +++ +.+.+.|.+||++.+....
T Consensus 268 ~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~ 322 (330)
T PLN02298 268 DVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKA 322 (330)
T ss_pred HHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCC
Confidence 99999988774 789999999999975 444 4578889999999875543
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=6.1e-31 Score=214.92 Aligned_cols=242 Identities=16% Similarity=0.214 Sum_probs=162.7
Q ss_pred EeCCCCceEEEEEEeCC--CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC-CCCChHHHHhH
Q 020932 66 IPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNYWREADD 142 (319)
Q Consensus 66 ~~~~dg~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d 142 (319)
+.+.||.++.+.++.|+ +++.|+++||+++++ ..|..+++.|+++||.|+++|+||||.|++.. ...++..+++|
T Consensus 5 ~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~--~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d 82 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITYPKALVFISHGAGEHS--GRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRD 82 (276)
T ss_pred eecCCCCEEEEEeccCCCCCCEEEEEeCCCcccc--chHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHH
Confidence 34568999999887774 466777789999888 56999999999999999999999999998643 23466777888
Q ss_pred HHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccch-hhhhchHHHHHhhhcccccc-c-
Q 020932 143 LRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI-EDRLGKDYMEKIMQDGFIDV-K- 217 (319)
Q Consensus 143 ~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~- 217 (319)
+...++.+... ...+++++||||||.+|+.+|.++|+ ++++|+++|........ ...+................ .
T Consensus 83 ~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T PHA02857 83 VVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKLCP 162 (276)
T ss_pred HHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCCCH
Confidence 88888877544 34579999999999999999999998 99999999865422110 00000000000000000000 0
Q ss_pred ---cCC--Cccee---------eeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhC-CCCeEE
Q 020932 218 ---NKT--GDVEY---------RVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII-PNHKLH 282 (319)
Q Consensus 218 ---~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~ 282 (319)
... ....+ ......................++++|+|+++|++|.++|++.++++.+.+ +++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~ 242 (276)
T PHA02857 163 ESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIK 242 (276)
T ss_pred hhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEE
Confidence 000 00000 000000000000000001112367999999999999999999999998887 468999
Q ss_pred EecCCCccCccc----HHHHHHHHHHHHHhh
Q 020932 283 VVEGANHGYTNH----QAELVSVVLDFVKAS 309 (319)
Q Consensus 283 ~~~~~gH~~~~~----~~~~~~~i~~fl~~~ 309 (319)
+++++||.++.+ .+++++.+.+||++.
T Consensus 243 ~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 243 IYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 999999997633 467999999999986
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.1e-30 Score=215.86 Aligned_cols=245 Identities=19% Similarity=0.207 Sum_probs=162.8
Q ss_pred cceEEEEEeCCCCceEEEEEEeCC--CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC--CCC
Q 020932 59 VKQQELVIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF--QYG 134 (319)
Q Consensus 59 ~~~~~~~~~~~dg~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~ 134 (319)
...+.+++...+|.++...|...+ .+|+|||+||++++. ..|..+++.|.+.||+|+++|+||||.|+... ...
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~--~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~ 96 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWS--YLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDY 96 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCch--hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccC
Confidence 356677777656665554454444 478999999999888 56999999998889999999999999997654 235
Q ss_pred ChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccc-hhhhh----------ch
Q 020932 135 NYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG-IEDRL----------GK 202 (319)
Q Consensus 135 ~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-~~~~~----------~~ 202 (319)
+++.+++|+.++++.+ +.++++++||||||.+|+.+|..+|+ |+++|++++....... ..... ..
T Consensus 97 ~~~~~a~~l~~~l~~l---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (302)
T PRK00870 97 TYARHVEWMRSWFEQL---DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPV 173 (302)
T ss_pred CHHHHHHHHHHHHHHc---CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCch
Confidence 7788899999999887 77789999999999999999999998 9999999874321110 00000 00
Q ss_pred HHHHHhhhccccc-cccC--------CCcceeeeehhhHHhhh--c-------cchhhhhhhccCCCcEEEEecCCCCcc
Q 020932 203 DYMEKIMQDGFID-VKNK--------TGDVEYRVTEESLMDRL--N-------TNMHDACLQIDMECSVLTIHGSSDKII 264 (319)
Q Consensus 203 ~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~ 264 (319)
............. .... .....+........... . ..........++++|+++|+|++|.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 253 (302)
T PRK00870 174 LPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPIT 253 (302)
T ss_pred hhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcc
Confidence 0000000000000 0000 00000000000000000 0 000000112367999999999999999
Q ss_pred CcchHHHHHhhCCCCe---EEEecCCCccCc-ccHHHHHHHHHHHHHhh
Q 020932 265 PLQDAHEFDKIIPNHK---LHVVEGANHGYT-NHQAELVSVVLDFVKAS 309 (319)
Q Consensus 265 ~~~~~~~~~~~~~~~~---~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 309 (319)
|.+. +.+.+.+++.+ +.+++++||+++ ++++++.+.|.+||+++
T Consensus 254 ~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 254 GGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred cCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 9766 88888888776 889999999975 77899999999999764
No 6
>PRK10749 lysophospholipase L2; Provisional
Probab=99.98 E-value=2.2e-30 Score=216.00 Aligned_cols=248 Identities=15% Similarity=0.180 Sum_probs=166.4
Q ss_pred ceEEEEEeCCCCceEEEEEEeC-CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC------
Q 020932 60 KQQELVIPNKYGERLVGVLHDA-ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ------ 132 (319)
Q Consensus 60 ~~~~~~~~~~dg~~l~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~------ 132 (319)
..+...+...||.++++..+++ .++++||++||++.+. ..|..++..|.++||+|+++|+||||.|+....
T Consensus 29 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~--~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 29 QREEAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESY--VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred hccceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchH--HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 3455667777899999887765 4678999999998877 458889999999999999999999999975421
Q ss_pred CCChHHHHhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHHHHhhh
Q 020932 133 YGNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQ 210 (319)
Q Consensus 133 ~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (319)
..+++.+++|+.++++.+... +..+++++||||||.+++.++.++|+ ++++|+++|......................
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~ 186 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNWAEG 186 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHHHHH
Confidence 146788899999999887554 56789999999999999999999999 9999999986543211111110111111100
Q ss_pred c-----cccc----cccCCCccee-eeehh---hHHhhhccch--------------------hhhhhhccCCCcEEEEe
Q 020932 211 D-----GFID----VKNKTGDVEY-RVTEE---SLMDRLNTNM--------------------HDACLQIDMECSVLTIH 257 (319)
Q Consensus 211 ~-----~~~~----~~~~~~~~~~-~~~~~---~~~~~~~~~~--------------------~~~~~~~~~~~P~l~i~ 257 (319)
. .+.. .........+ ..... ...+.+..+. .......++++|+|+|+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~ 266 (330)
T PRK10749 187 HPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQ 266 (330)
T ss_pred hcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEE
Confidence 0 0000 0000000000 00000 0000000000 00111235789999999
Q ss_pred cCCCCccCcchHHHHHhhC-------CCCeEEEecCCCccCccc----HHHHHHHHHHHHHhh
Q 020932 258 GSSDKIIPLQDAHEFDKII-------PNHKLHVVEGANHGYTNH----QAELVSVVLDFVKAS 309 (319)
Q Consensus 258 g~~D~~~~~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~~----~~~~~~~i~~fl~~~ 309 (319)
|++|.+++++.++.+++.+ +++++++++|+||.++.+ .+++.+.|.+||++.
T Consensus 267 G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 267 AEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred eCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 9999999999988888765 356899999999997632 366889999999864
No 7
>PRK13604 luxD acyl transferase; Provisional
Probab=99.98 E-value=3.7e-30 Score=204.90 Aligned_cols=228 Identities=15% Similarity=0.191 Sum_probs=162.5
Q ss_pred eEEEEEeCCCCceEEEEEEeCC-----CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC-CCCCCCCCCC
Q 020932 61 QQELVIPNKYGERLVGVLHDAE-----SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN-GESEGSFQYG 134 (319)
Q Consensus 61 ~~~~~~~~~dg~~l~~~~~~~~-----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~-G~s~~~~~~~ 134 (319)
..+..+.+.||.+|.+|+..|+ +.++||++||+++.. ..+..+++.|+++||.|+.+|+||+ |+|++.....
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~--~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRM--DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCCh--HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC
Confidence 4455677889999999999884 457899999999987 4589999999999999999999987 9998877555
Q ss_pred ChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhcccc
Q 020932 135 NYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFI 214 (319)
Q Consensus 135 ~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (319)
++.....|+.++++|+++++.+++.|+||||||.+|+.+|.. ++++++|+.+|..++...+...+...+. ..+..
T Consensus 87 t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~-~~v~~lI~~sp~~~l~d~l~~~~~~~~~----~~p~~ 161 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINE-IDLSFLITAVGVVNLRDTLERALGYDYL----SLPID 161 (307)
T ss_pred cccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcC-CCCCEEEEcCCcccHHHHHHHhhhcccc----cCccc
Confidence 555568999999999998877889999999999999776664 3499999999988765444332111000 00010
Q ss_pred ccccCCCcceeeee-hhhHHhhhccchh---h-hhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC--CCeEEEecCC
Q 020932 215 DVKNKTGDVEYRVT-EESLMDRLNTNMH---D-ACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP--NHKLHVVEGA 287 (319)
Q Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~-~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~ 287 (319)
.............. ...+...+..+.. . .....+++.|+|+|||++|.+||.+.++++++.++ ++++++++|+
T Consensus 162 ~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga 241 (307)
T PRK13604 162 ELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGS 241 (307)
T ss_pred ccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCC
Confidence 00000000001111 1222222122111 0 01112457999999999999999999999999885 6899999999
Q ss_pred CccCcccH
Q 020932 288 NHGYTNHQ 295 (319)
Q Consensus 288 gH~~~~~~ 295 (319)
+|.+.++.
T Consensus 242 ~H~l~~~~ 249 (307)
T PRK13604 242 SHDLGENL 249 (307)
T ss_pred ccccCcch
Confidence 99987654
No 8
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.98 E-value=3.8e-30 Score=212.02 Aligned_cols=241 Identities=16% Similarity=0.174 Sum_probs=162.6
Q ss_pred ccceEEEEEeCCCCceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC------
Q 020932 58 AVKQQELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF------ 131 (319)
Q Consensus 58 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~------ 131 (319)
.++.+.+.+ +|..+++...++ ++++|||+||+++++ ..|..+++.|.++ |+|+++|+||||.|+...
T Consensus 7 ~~~~~~~~~---~~~~i~y~~~G~-~~~~vlllHG~~~~~--~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~ 79 (294)
T PLN02824 7 QVETRTWRW---KGYNIRYQRAGT-SGPALVLVHGFGGNA--DHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPP 79 (294)
T ss_pred CCCCceEEE---cCeEEEEEEcCC-CCCeEEEECCCCCCh--hHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccc
Confidence 344555555 377777544332 458999999999998 5799999999987 799999999999998653
Q ss_pred -CCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccccccc-----chhhhhchHH
Q 020932 132 -QYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG-----GIEDRLGKDY 204 (319)
Q Consensus 132 -~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-----~~~~~~~~~~ 204 (319)
...+++++++|+.++++.+ +.++++++||||||.+++.+|.++|+ |+++|++++...... .........+
T Consensus 80 ~~~~~~~~~a~~l~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~ 156 (294)
T PLN02824 80 NSFYTFETWGEQLNDFCSDV---VGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAF 156 (294)
T ss_pred cccCCHHHHHHHHHHHHHHh---cCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHH
Confidence 2467889999999999988 67889999999999999999999999 999999997542110 0000000000
Q ss_pred HHH----------------------hhhccccccccCCCcce-------eee-ehhhHHhhhc--cchhhhhhhccCCCc
Q 020932 205 MEK----------------------IMQDGFIDVKNKTGDVE-------YRV-TEESLMDRLN--TNMHDACLQIDMECS 252 (319)
Q Consensus 205 ~~~----------------------~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~--~~~~~~~~~~~~~~P 252 (319)
... .....+........... ... ....+..... ..........++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 236 (294)
T PLN02824 157 QNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCP 236 (294)
T ss_pred HHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCC
Confidence 000 00000000000000000 000 0000111110 000001112357999
Q ss_pred EEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCc-ccHHHHHHHHHHHHHh
Q 020932 253 VLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVKA 308 (319)
Q Consensus 253 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 308 (319)
+|+|+|++|.+++.+.++.+.+..+++++++++++||+++ ++++++.+.|.+|+++
T Consensus 237 ~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 237 VLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred eEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 9999999999999999998888888899999999999964 7789999999999976
No 9
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.97 E-value=3e-30 Score=210.60 Aligned_cols=235 Identities=15% Similarity=0.267 Sum_probs=161.5
Q ss_pred CCceEEEEEEeCC-CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHH
Q 020932 70 YGERLVGVLHDAE-SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQ 148 (319)
Q Consensus 70 dg~~l~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~ 148 (319)
+|.++++++.+.+ .+++|||+||++++. ..|..+.+.|.+. |+|+++|+||||.|+.+....+++.+++|+.++++
T Consensus 10 ~~~~~~~~~~~~~~~~~plvllHG~~~~~--~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~ 86 (276)
T TIGR02240 10 DGQSIRTAVRPGKEGLTPLLIFNGIGANL--ELVFPFIEALDPD-LEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLD 86 (276)
T ss_pred CCcEEEEEEecCCCCCCcEEEEeCCCcch--HHHHHHHHHhccC-ceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHH
Confidence 5888888765433 447999999999998 5689999999775 99999999999999866555678899999999999
Q ss_pred HHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccc--cchhhh---h-c-hHHHHHhh-----hccccc
Q 020932 149 YFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK--GGIEDR---L-G-KDYMEKIM-----QDGFID 215 (319)
Q Consensus 149 ~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~--~~~~~~---~-~-~~~~~~~~-----~~~~~~ 215 (319)
.+ +.++++|+||||||.+++.+|.++|+ |+++|++++..... ...... . . ..+..... ...+..
T Consensus 87 ~l---~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (276)
T TIGR02240 87 YL---DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGG 163 (276)
T ss_pred Hh---CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccc
Confidence 98 67789999999999999999999999 99999999865421 000000 0 0 00000000 000000
Q ss_pred cccCCCccee----eee---h-hhHHhhhc-cchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecC
Q 020932 216 VKNKTGDVEY----RVT---E-ESLMDRLN-TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEG 286 (319)
Q Consensus 216 ~~~~~~~~~~----~~~---~-~~~~~~~~-~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (319)
.......... ... . ........ ..........++++|+|+|+|++|+++|++..+.+.+.+++++++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~ 243 (276)
T TIGR02240 164 AFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD 243 (276)
T ss_pred eeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC
Confidence 0000000000 000 0 00000000 0000011123679999999999999999999999999999999999985
Q ss_pred CCccCc-ccHHHHHHHHHHHHHhhcC
Q 020932 287 ANHGYT-NHQAELVSVVLDFVKASLK 311 (319)
Q Consensus 287 ~gH~~~-~~~~~~~~~i~~fl~~~~~ 311 (319)
||+++ ++++++++.|.+|+++.-.
T Consensus 244 -gH~~~~e~p~~~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 244 -GHLFLITRAEAVAPIIMKFLAEERQ 268 (276)
T ss_pred -CCchhhccHHHHHHHHHHHHHHhhh
Confidence 99964 7789999999999997643
No 10
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.97 E-value=2.7e-29 Score=194.24 Aligned_cols=251 Identities=18% Similarity=0.250 Sum_probs=178.1
Q ss_pred cccceEEEEEeCCCCceEEEEEEeC----CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ 132 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 132 (319)
..+....-.+.+.+|..+....|.| .++..|+++||++.... +.+..++..|+..||.|+++|++|||.|++...
T Consensus 23 ~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s-~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~ 101 (313)
T KOG1455|consen 23 GGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSS-WRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA 101 (313)
T ss_pred CccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccch-hhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc
Confidence 3445666678888999999988876 24568999999999875 578999999999999999999999999998774
Q ss_pred -CCChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhh-hchH---
Q 020932 133 -YGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDR-LGKD--- 203 (319)
Q Consensus 133 -~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~-~~~~--- 203 (319)
..+++..++|+.+..+.++.+ ...+..++||||||.+++.++.+.|+ .+++|+++|.....+..... .-..
T Consensus 102 yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~ 181 (313)
T KOG1455|consen 102 YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILT 181 (313)
T ss_pred cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHH
Confidence 467889999999999987665 34478999999999999999999999 99999999976554433211 0000
Q ss_pred HHHHhhhccccccccC-----------------CCcceee--eehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCcc
Q 020932 204 YMEKIMQDGFIDVKNK-----------------TGDVEYR--VTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKII 264 (319)
Q Consensus 204 ~~~~~~~~~~~~~~~~-----------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 264 (319)
.+..+... +...... .....+. .......+.+...........++++|.+++||++|.++
T Consensus 182 ~l~~liP~-wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VT 260 (313)
T KOG1455|consen 182 LLSKLIPT-WKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVT 260 (313)
T ss_pred HHHHhCCc-eeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCccc
Confidence 11111100 0000000 0000000 01111112222222222222367999999999999999
Q ss_pred CcchHHHHHhhCC--CCeEEEecCCCccCcc-c----HHHHHHHHHHHHHhh
Q 020932 265 PLQDAHEFDKIIP--NHKLHVVEGANHGYTN-H----QAELVSVVLDFVKAS 309 (319)
Q Consensus 265 ~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-~----~~~~~~~i~~fl~~~ 309 (319)
.++.++.+++..+ +.++..|||.-|.++. + -+.+...|.+||++.
T Consensus 261 Dp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 261 DPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999999885 6899999999999752 2 366899999999875
No 11
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=2.2e-29 Score=207.56 Aligned_cols=232 Identities=13% Similarity=0.127 Sum_probs=156.6
Q ss_pred CCceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHH
Q 020932 70 YGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQY 149 (319)
Q Consensus 70 dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~ 149 (319)
+|.++++.. .+++++|||+||++++. ..|..+++.|.++ ++|+++|+||||.|+.+....++..+++|+.++++.
T Consensus 15 ~g~~i~y~~--~G~g~~vvllHG~~~~~--~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~ 89 (295)
T PRK03592 15 LGSRMAYIE--TGEGDPIVFLHGNPTSS--YLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDA 89 (295)
T ss_pred CCEEEEEEE--eCCCCEEEEECCCCCCH--HHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 577777554 34678999999999988 6799999999998 599999999999998766556788999999999998
Q ss_pred HHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccccccc--chhhhhchHHHHHhhhccccc--------ccc
Q 020932 150 FCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG--GIEDRLGKDYMEKIMQDGFID--------VKN 218 (319)
Q Consensus 150 l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~~ 218 (319)
+ +.++++++|||+||.+|+.++.++|+ |+++|++++...... ...... ......+....... ...
T Consensus 90 l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (295)
T PRK03592 90 L---GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAV-RELFQALRSPGEGEEMVLEENVFIE 165 (295)
T ss_pred h---CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhH-HHHHHHHhCcccccccccchhhHHh
Confidence 8 67889999999999999999999999 999999997432211 010000 01111111000000 000
Q ss_pred -CCCcc-eeeeehhhH----------------Hhhhc---c-----chh-----hhhhhccCCCcEEEEecCCCCccCcc
Q 020932 219 -KTGDV-EYRVTEESL----------------MDRLN---T-----NMH-----DACLQIDMECSVLTIHGSSDKIIPLQ 267 (319)
Q Consensus 219 -~~~~~-~~~~~~~~~----------------~~~~~---~-----~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~ 267 (319)
..... ......+.+ ..... . ... ......++++|+|+|+|++|.++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~ 245 (295)
T PRK03592 166 RVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTG 245 (295)
T ss_pred hcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcH
Confidence 00000 000000000 00000 0 000 00111256999999999999999655
Q ss_pred hHHHH-HhhCCCCeEEEecCCCccCc-ccHHHHHHHHHHHHHhhc
Q 020932 268 DAHEF-DKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVKASL 310 (319)
Q Consensus 268 ~~~~~-~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 310 (319)
...++ .+..+++++++++++||+++ ++++++++.|.+|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 246 AIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred HHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhc
Confidence 55454 45577899999999999975 778999999999998754
No 12
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=2e-29 Score=203.25 Aligned_cols=219 Identities=21% Similarity=0.186 Sum_probs=149.7
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC-CCChHHHHhHHHHHHHHHHhCCC-ceEEEEE
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGNYWREADDLRAVVQYFCGANR-AVGAILG 162 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i~~l~~~~~-~~i~l~G 162 (319)
-+|||+||++.+. +.|..+++.|.+.||+|+++|+||||.|+.... ..+++.+++|+.++++.+ +. ++++++|
T Consensus 4 ~~vvllHG~~~~~--~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---~~~~~~~lvG 78 (255)
T PLN02965 4 IHFVFVHGASHGA--WCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL---PPDHKVILVG 78 (255)
T ss_pred eEEEEECCCCCCc--CcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc---CCCCCEEEEe
Confidence 3599999999888 569999999988899999999999999986543 457888999999999987 54 4899999
Q ss_pred EehhHHHHHHHHhhcCC-ccEEEEEecccccccch-hhhhchHHHHH---hhhccccccccCCC------c-ce----ee
Q 020932 163 HSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI-EDRLGKDYMEK---IMQDGFIDVKNKTG------D-VE----YR 226 (319)
Q Consensus 163 ~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~------~-~~----~~ 226 (319)
|||||.+++.++.++|+ |+++|++++........ ..... ..... .....+........ . .. +.
T Consensus 79 hSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (255)
T PLN02965 79 HSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLK-NVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYN 157 (255)
T ss_pred cCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHH-hhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhc
Confidence 99999999999999998 99999998753211100 00000 00000 00000000000000 0 00 00
Q ss_pred e-ehh--hH-Hhhhccc-------hh-hhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCc-c
Q 020932 227 V-TEE--SL-MDRLNTN-------MH-DACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT-N 293 (319)
Q Consensus 227 ~-~~~--~~-~~~~~~~-------~~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~ 293 (319)
. ... .. ...+... .. .......+++|+++++|++|.++|++..+.+.+.++++++++++++||+++ +
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e 237 (255)
T PLN02965 158 QSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFS 237 (255)
T ss_pred CCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhc
Confidence 0 000 00 0000000 00 000112479999999999999999999999999999999999999999975 7
Q ss_pred cHHHHHHHHHHHHHhh
Q 020932 294 HQAELVSVVLDFVKAS 309 (319)
Q Consensus 294 ~~~~~~~~i~~fl~~~ 309 (319)
+++++++.|.+|+++.
T Consensus 238 ~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 238 VPTTLFQYLLQAVSSL 253 (255)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 7899999999998764
No 13
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=1.2e-28 Score=202.22 Aligned_cols=240 Identities=18% Similarity=0.218 Sum_probs=152.7
Q ss_pred EEEEEeCCCCce-EEEEEEeCCCceEEEEEccCCCCCCChhHH---HHHHHHHHcCceEEEEcCCCCCCCCCCCC-CCCh
Q 020932 62 QELVIPNKYGER-LVGVLHDAESSEIVVLCHGFRSTKDDPSMV---NLAVALQNEGISAFRFDFAGNGESEGSFQ-YGNY 136 (319)
Q Consensus 62 ~~~~~~~~dg~~-l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~---~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~ 136 (319)
+.+.+... |.+ +..+|...+++|+||++||++++.. .|. ..+..|.+.||+|+++|+||||.|+.... ....
T Consensus 8 ~~~~~~~~-~~~~~~~~y~~~g~~~~ivllHG~~~~~~--~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 84 (282)
T TIGR03343 8 KFVKINEK-GLSNFRIHYNEAGNGEAVIMLHGGGPGAG--GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG 84 (282)
T ss_pred eEEEcccc-cccceeEEEEecCCCCeEEEECCCCCchh--hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccccc
Confidence 45555433 332 3444555667789999999988774 343 33556777789999999999999986532 1111
Q ss_pred HHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchh--h-hhchHHHH------
Q 020932 137 WREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIE--D-RLGKDYME------ 206 (319)
Q Consensus 137 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~--~-~~~~~~~~------ 206 (319)
...++|+.++++.+ +.++++++||||||.+++.+|.++|+ ++++|++++......... . .....+..
T Consensus 85 ~~~~~~l~~~l~~l---~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (282)
T TIGR03343 85 LVNARAVKGLMDAL---DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPS 161 (282)
T ss_pred chhHHHHHHHHHHc---CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCC
Confidence 24578888888877 77889999999999999999999998 999999987532111000 0 00000000
Q ss_pred -----HhhhccccccccCCCcc---ee---eeehhhHHhhhc-------cchhhhhhhccCCCcEEEEecCCCCccCcch
Q 020932 207 -----KIMQDGFIDVKNKTGDV---EY---RVTEESLMDRLN-------TNMHDACLQIDMECSVLTIHGSSDKIIPLQD 268 (319)
Q Consensus 207 -----~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 268 (319)
................. .+ ............ ..........++++|+|+++|++|.+++++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~ 241 (282)
T TIGR03343 162 YETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDH 241 (282)
T ss_pred HHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchh
Confidence 00000000000000000 00 000000000000 0000011123679999999999999999999
Q ss_pred HHHHHhhCCCCeEEEecCCCccCc-ccHHHHHHHHHHHHH
Q 020932 269 AHEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVK 307 (319)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 307 (319)
++++++.++++++++++++||+++ ++++++.+.|.+||+
T Consensus 242 ~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 242 GLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 999999999999999999999975 778899999999986
No 14
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=7.8e-28 Score=202.91 Aligned_cols=248 Identities=16% Similarity=0.258 Sum_probs=169.8
Q ss_pred ccceEEEEEeCCCCceEEEEEEeCC---CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC-C
Q 020932 58 AVKQQELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-Y 133 (319)
Q Consensus 58 ~~~~~~~~~~~~dg~~l~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~ 133 (319)
+.......+...++..+.+..+.|. .+++||++||++++. ..|..+++.|+++||+|+++|+||||.|++... .
T Consensus 107 g~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~--~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~ 184 (395)
T PLN02652 107 GTRWATSLFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHS--GRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYV 184 (395)
T ss_pred CceEEEEEEECCCCCEEEEEEecCCCCCCceEEEEECCchHHH--HHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCC
Confidence 4456667778888888888877663 457999999999887 568999999999999999999999999987643 3
Q ss_pred CChHHHHhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcC---C-ccEEEEEecccccccchh--hhhchHHHH
Q 020932 134 GNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYN---D-IRTFVNVSGRYDLKGGIE--DRLGKDYME 206 (319)
Q Consensus 134 ~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~~~~~~~--~~~~~~~~~ 206 (319)
.+++.+.+|+.++++.+... +..+++++||||||.+++.++. +| + ++++|+.+|......... ... .....
T Consensus 185 ~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~-~~l~~ 262 (395)
T PLN02652 185 PSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAV-APIFS 262 (395)
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHH-HHHHH
Confidence 46778889999999999765 3347999999999999998765 44 2 899999998765432110 000 01111
Q ss_pred Hhhhc-cccccccCCCcceeeeehhhHHhhh-------------------ccchhhhhhhccCCCcEEEEecCCCCccCc
Q 020932 207 KIMQD-GFIDVKNKTGDVEYRVTEESLMDRL-------------------NTNMHDACLQIDMECSVLTIHGSSDKIIPL 266 (319)
Q Consensus 207 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 266 (319)
.+... .+..... .. .............+ ...........++++|+|+++|++|.++|+
T Consensus 263 ~~~p~~~~~~~~~-~~-~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~ 340 (395)
T PLN02652 263 LVAPRFQFKGANK-RG-IPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDP 340 (395)
T ss_pred HhCCCCcccCccc-cc-CCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCH
Confidence 11000 0000000 00 00000000000000 000000111235799999999999999999
Q ss_pred chHHHHHhhCC--CCeEEEecCCCccCc-c-cHHHHHHHHHHHHHhhcC
Q 020932 267 QDAHEFDKIIP--NHKLHVVEGANHGYT-N-HQAELVSVVLDFVKASLK 311 (319)
Q Consensus 267 ~~~~~~~~~~~--~~~~~~~~~~gH~~~-~-~~~~~~~~i~~fl~~~~~ 311 (319)
+.++++++..+ +++++++++++|..+ + +++++.+.+.+||++.+.
T Consensus 341 ~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 341 LASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 99999988865 478999999999964 3 578999999999998875
No 15
>PRK06489 hypothetical protein; Provisional
Probab=99.97 E-value=1e-28 Score=208.45 Aligned_cols=252 Identities=16% Similarity=0.174 Sum_probs=156.9
Q ss_pred CCccccceEEEEEeC---CCCceEEEEEEeCCC-------ceEEEEEccCCCCCCChhHH--HHHHHH-------HHcCc
Q 020932 54 PQNLAVKQQELVIPN---KYGERLVGVLHDAES-------SEIVVLCHGFRSTKDDPSMV--NLAVAL-------QNEGI 114 (319)
Q Consensus 54 ~~~~~~~~~~~~~~~---~dg~~l~~~~~~~~~-------~~~vv~~hG~~~~~~~~~~~--~~~~~l-------~~~G~ 114 (319)
|.+..+..+.+.+.+ .+|.++++..++.+. +|+|||+||++++... |. .+.+.| ..++|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~--~~~~~~~~~l~~~~~~l~~~~~ 106 (360)
T PRK06489 29 PQEGDWVARDFTFHSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKS--FLSPTFAGELFGPGQPLDASKY 106 (360)
T ss_pred CccCceeccceeccCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhh--hccchhHHHhcCCCCcccccCC
Confidence 333444455555554 456666655554433 7899999999998743 43 555554 23569
Q ss_pred eEEEEcCCCCCCCCCCCC-------CCChHHHHhHHHHHH-HHHHhCCCceEE-EEEEehhHHHHHHHHhhcCC-ccEEE
Q 020932 115 SAFRFDFAGNGESEGSFQ-------YGNYWREADDLRAVV-QYFCGANRAVGA-ILGHSKGGSVVLLYASKYND-IRTFV 184 (319)
Q Consensus 115 ~v~~~d~~G~G~s~~~~~-------~~~~~~~~~d~~~~i-~~l~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~-v~~~v 184 (319)
+|+++|+||||.|+.+.. ..+++++++++.+++ +.+ +.+++. ++||||||++|+.+|.++|+ |+++|
T Consensus 107 ~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~l---gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LV 183 (360)
T PRK06489 107 FIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGL---GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALM 183 (360)
T ss_pred EEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhc---CCCceeEEEEECHHHHHHHHHHHhCchhhheee
Confidence 999999999999976432 245667777766644 555 677775 89999999999999999999 99999
Q ss_pred EEecccccccchhhhhchHHHHHhhhcc-c-----cc----------------------c--ccCCCcc---e-------
Q 020932 185 NVSGRYDLKGGIEDRLGKDYMEKIMQDG-F-----ID----------------------V--KNKTGDV---E------- 224 (319)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~----------------------~--~~~~~~~---~------- 224 (319)
++++...................+.... + .. . ....... .
T Consensus 184 Li~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T PRK06489 184 PMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAA 263 (360)
T ss_pred eeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHh
Confidence 9987532111000000000000000000 0 00 0 0000000 0
Q ss_pred -eeeehhhHHhhhc--cchhhhhhhccCCCcEEEEecCCCCccCcchH--HHHHhhCCCCeEEEecCC----CccCcccH
Q 020932 225 -YRVTEESLMDRLN--TNMHDACLQIDMECSVLTIHGSSDKIIPLQDA--HEFDKIIPNHKLHVVEGA----NHGYTNHQ 295 (319)
Q Consensus 225 -~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~----gH~~~~~~ 295 (319)
.......+...+. ..........++++|+|+|+|++|.++|++.+ +.+.+.++++++++++++ ||..++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~e~P 343 (360)
T PRK06489 264 PVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTTGSA 343 (360)
T ss_pred hhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccccCH
Confidence 0000000000000 00000111235799999999999999998875 788999999999999996 99988889
Q ss_pred HHHHHHHHHHHHhhc
Q 020932 296 AELVSVVLDFVKASL 310 (319)
Q Consensus 296 ~~~~~~i~~fl~~~~ 310 (319)
+++++.|.+||++.-
T Consensus 344 ~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 344 KFWKAYLAEFLAQVP 358 (360)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998754
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=1.5e-28 Score=198.60 Aligned_cols=219 Identities=19% Similarity=0.220 Sum_probs=150.3
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 161 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 161 (319)
+++|+||++||++++. ..|..++..|.+. |+|+++|+||||.|..... .+++++++|+.++++.+ +.++++++
T Consensus 14 ~~~~~iv~lhG~~~~~--~~~~~~~~~l~~~-~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~l---~~~~~~lv 86 (255)
T PRK10673 14 HNNSPIVLVHGLFGSL--DNLGVLARDLVND-HDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDAL---QIEKATFI 86 (255)
T ss_pred CCCCCEEEECCCCCch--hHHHHHHHHHhhC-CeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHc---CCCceEEE
Confidence 3678999999999998 4688999999765 9999999999999986543 57889999999999988 66789999
Q ss_pred EEehhHHHHHHHHhhcCC-ccEEEEEecccccccc-hhhhh-------------chHHHHHhhhcccc-----ccc-cCC
Q 020932 162 GHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG-IEDRL-------------GKDYMEKIMQDGFI-----DVK-NKT 220 (319)
Q Consensus 162 G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-~~~~~-------------~~~~~~~~~~~~~~-----~~~-~~~ 220 (319)
||||||.+++.+|.++|+ |+++|++++....... ..... .............. ... ...
T Consensus 87 GhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (255)
T PRK10673 87 GHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSF 166 (255)
T ss_pred EECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcC
Confidence 999999999999999998 9999998753221110 00000 00000000000000 000 000
Q ss_pred CcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCc-ccHHHHH
Q 020932 221 GDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT-NHQAELV 299 (319)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~ 299 (319)
....+..........+.. .........+++|+|+|+|++|..++.+..+.+.+.++++++++++++||++. ++++++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~ 245 (255)
T PRK10673 167 VDGEWRFNVPVLWDQYPH-IVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVL 245 (255)
T ss_pred CcceeEeeHHHHHHhHHH-HhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHH
Confidence 000011111111111100 00001122468999999999999999999999999999999999999999964 6788999
Q ss_pred HHHHHHHHh
Q 020932 300 SVVLDFVKA 308 (319)
Q Consensus 300 ~~i~~fl~~ 308 (319)
+.|.+||++
T Consensus 246 ~~l~~fl~~ 254 (255)
T PRK10673 246 RAIRRYLND 254 (255)
T ss_pred HHHHHHHhc
Confidence 999999975
No 17
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=4.1e-28 Score=198.40 Aligned_cols=229 Identities=15% Similarity=0.161 Sum_probs=149.2
Q ss_pred CCceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC-CCChHHHHhHHHHHHH
Q 020932 70 YGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGNYWREADDLRAVVQ 148 (319)
Q Consensus 70 dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i~ 148 (319)
+|.++++. ..|++++|||+||++.+. ..|..+.+.|.+. |+|+++|+||||.|+.+.. ..+.+.+++++.++++
T Consensus 22 ~~~~i~y~--~~G~~~~iv~lHG~~~~~--~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~ 96 (286)
T PRK03204 22 SRGRIHYI--DEGTGPPILLCHGNPTWS--FLYRDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVD 96 (286)
T ss_pred CCcEEEEE--ECCCCCEEEEECCCCccH--HHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHH
Confidence 36677644 445678999999998766 5789999998765 9999999999999986543 3456777888888888
Q ss_pred HHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhh-h---------chH------HHHHhhhc
Q 020932 149 YFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDR-L---------GKD------YMEKIMQD 211 (319)
Q Consensus 149 ~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~-~---------~~~------~~~~~~~~ 211 (319)
.+ +.++++++||||||.+++.++..+|+ |+++|++++........... . ... +...+...
T Consensus 97 ~~---~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (286)
T PRK03204 97 HL---GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPA 173 (286)
T ss_pred Hh---CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccc
Confidence 77 77789999999999999999999998 99999987754221111000 0 000 00000000
Q ss_pred cccccccCCCccee-e-eehhhHHh-------hhccc--hhhh----hhhccCCCcEEEEecCCCCccCcc-hHHHHHhh
Q 020932 212 GFIDVKNKTGDVEY-R-VTEESLMD-------RLNTN--MHDA----CLQIDMECSVLTIHGSSDKIIPLQ-DAHEFDKI 275 (319)
Q Consensus 212 ~~~~~~~~~~~~~~-~-~~~~~~~~-------~~~~~--~~~~----~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~ 275 (319)
.............+ . ........ .+... .... .....+++|+++|+|++|.++++. ..+.+.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ 253 (286)
T PRK03204 174 GTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRAT 253 (286)
T ss_pred cccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHh
Confidence 00000000000000 0 00000000 00000 0000 001122799999999999988665 46888899
Q ss_pred CCCCeEEEecCCCccCc-ccHHHHHHHHHHHH
Q 020932 276 IPNHKLHVVEGANHGYT-NHQAELVSVVLDFV 306 (319)
Q Consensus 276 ~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl 306 (319)
+++.++++++++||+++ ++++++.+.|.+||
T Consensus 254 ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 254 FPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred cCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 99999999999999975 77899999999997
No 18
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=4e-28 Score=198.72 Aligned_cols=232 Identities=18% Similarity=0.198 Sum_probs=157.4
Q ss_pred CCceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC-CCChHHHHhHHHHHHH
Q 020932 70 YGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGNYWREADDLRAVVQ 148 (319)
Q Consensus 70 dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i~ 148 (319)
+|.++.+.-.++.++|+||++||++++. ..|..+.+.|++ +|+|+++|+||||.|+.+.. ..+++.+++|+.++++
T Consensus 14 ~~~~~~~~~~g~~~~~~vv~~hG~~~~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~ 90 (278)
T TIGR03056 14 GPFHWHVQDMGPTAGPLLLLLHGTGAST--HSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCA 90 (278)
T ss_pred CCEEEEEEecCCCCCCeEEEEcCCCCCH--HHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHH
Confidence 5777776554444578999999999988 568999999977 49999999999999986654 5678888999999988
Q ss_pred HHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhh----ch---------HHHHHhhh--cc
Q 020932 149 YFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRL----GK---------DYMEKIMQ--DG 212 (319)
Q Consensus 149 ~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~----~~---------~~~~~~~~--~~ 212 (319)
.+ +.++++++||||||.+++.+|..+|+ ++++|++++............ .. ........ ..
T Consensus 91 ~~---~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (278)
T TIGR03056 91 AE---GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQR 167 (278)
T ss_pred Hc---CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcc
Confidence 76 66789999999999999999999998 999999987553221110000 00 00000000 00
Q ss_pred ccccccCCCcceeeeehhhHH-------------hhhcc-ch-hhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC
Q 020932 213 FIDVKNKTGDVEYRVTEESLM-------------DRLNT-NM-HDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP 277 (319)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~-~~-~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (319)
...................+. ..+.. .. .......++++|+++|+|++|.++|.+..+.+.+.++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~ 247 (278)
T TIGR03056 168 VERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVP 247 (278)
T ss_pred hhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhcc
Confidence 000000000000000000000 00000 00 0011122568999999999999999999999999999
Q ss_pred CCeEEEecCCCccCc-ccHHHHHHHHHHHHH
Q 020932 278 NHKLHVVEGANHGYT-NHQAELVSVVLDFVK 307 (319)
Q Consensus 278 ~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 307 (319)
++++++++++||+++ ++++++.+.|.+|++
T Consensus 248 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 248 TATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred CCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 999999999999965 778999999999984
No 19
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=5.4e-28 Score=203.63 Aligned_cols=232 Identities=17% Similarity=0.240 Sum_probs=152.4
Q ss_pred Cc-eEEEEEEeCC----CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC-CCCChHHHHhHHH
Q 020932 71 GE-RLVGVLHDAE----SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNYWREADDLR 144 (319)
Q Consensus 71 g~-~l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~ 144 (319)
|. ++++...+++ .+|+|||+||++++. ..|..++..|.+ +|+|+++|+||||.|+.+. ...+++.+++++.
T Consensus 70 g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~--~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~ 146 (360)
T PLN02679 70 GEYSINYLVKGSPEVTSSGPPVLLVHGFGASI--PHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELIL 146 (360)
T ss_pred CceeEEEEEecCcccCCCCCeEEEECCCCCCH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHH
Confidence 54 6776555544 458999999999988 679999999976 5999999999999998754 2457788899999
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhh-cCC-ccEEEEEecccccccc-----hhh-hh-c--------------
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASK-YND-IRTFVNVSGRYDLKGG-----IED-RL-G-------------- 201 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~-~p~-v~~~v~~~~~~~~~~~-----~~~-~~-~-------------- 201 (319)
++++.+ +.++++|+||||||.+++.++.. +|+ |+++|++++....... ... .. .
T Consensus 147 ~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (360)
T PLN02679 147 DFLEEV---VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGI 223 (360)
T ss_pred HHHHHh---cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhh
Confidence 999877 67789999999999999988874 687 9999999975422110 000 00 0
Q ss_pred -hHHHHHh-----hhccccccccCCCcce------------eeeehhhHHhhhcc--chhhhhhhccCCCcEEEEecCCC
Q 020932 202 -KDYMEKI-----MQDGFIDVKNKTGDVE------------YRVTEESLMDRLNT--NMHDACLQIDMECSVLTIHGSSD 261 (319)
Q Consensus 202 -~~~~~~~-----~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D 261 (319)
..+.... ....+........... .......+...... .........++++|+|+|+|++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D 303 (360)
T PLN02679 224 ASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQD 303 (360)
T ss_pred HHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCC
Confidence 0000000 0000000000000000 00000011111110 00001112257999999999999
Q ss_pred CccCcch-----HHHHHhhCCCCeEEEecCCCccCc-ccHHHHHHHHHHHHHh
Q 020932 262 KIIPLQD-----AHEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVKA 308 (319)
Q Consensus 262 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 308 (319)
.++|++. .+.+.+.++++++++++++||+++ ++++++++.|.+||++
T Consensus 304 ~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 304 PFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred CCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 9998863 245667789999999999999975 6789999999999986
No 20
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.96 E-value=9.4e-28 Score=195.01 Aligned_cols=250 Identities=22% Similarity=0.306 Sum_probs=173.4
Q ss_pred ceEEEEEeCCCCceEEEEEEeCC-C-ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC-CCC-CCCC
Q 020932 60 KQQELVIPNKYGERLVGVLHDAE-S-SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE-GSF-QYGN 135 (319)
Q Consensus 60 ~~~~~~~~~~dg~~l~~~~~~~~-~-~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~-~~~-~~~~ 135 (319)
...+..+...||..+.+..+.+. + +.+||++||++.+. .-|..++..|..+||.|+++|+||||.|. +.. ...+
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~--~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~ 85 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHS--GRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDS 85 (298)
T ss_pred ccccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHH--HHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchh
Confidence 44455666778999998887765 2 37999999999999 56889999999999999999999999997 443 4556
Q ss_pred hHHHHhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccc-hhhhhch---HHHHHhh
Q 020932 136 YWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG-IEDRLGK---DYMEKIM 209 (319)
Q Consensus 136 ~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-~~~~~~~---~~~~~~~ 209 (319)
+.++.+|+.++++.+... ...+++++||||||.+++.++.+++. |+++|+.+|.+..... ....... .....+.
T Consensus 86 f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~ 165 (298)
T COG2267 86 FADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGRIR 165 (298)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccccc
Confidence 899999999999998764 55689999999999999999999987 9999999998877640 0000000 0000000
Q ss_pred h-ccccccccCCCcceeeeehhhHHhhhccch---------------------hhhhhhccCCCcEEEEecCCCCccC-c
Q 020932 210 Q-DGFIDVKNKTGDVEYRVTEESLMDRLNTNM---------------------HDACLQIDMECSVLTIHGSSDKIIP-L 266 (319)
Q Consensus 210 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~P~l~i~g~~D~~~~-~ 266 (319)
. ..+....................+.+..+. ........+++|+|+++|++|.+++ .
T Consensus 166 p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~ 245 (298)
T COG2267 166 PKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNV 245 (298)
T ss_pred cccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCccccCc
Confidence 0 000000000000001111111111111111 0111123568999999999999999 6
Q ss_pred chHHHHHhhC--CCCeEEEecCCCccCccc--H--HHHHHHHHHHHHhhcC
Q 020932 267 QDAHEFDKII--PNHKLHVVEGANHGYTNH--Q--AELVSVVLDFVKASLK 311 (319)
Q Consensus 267 ~~~~~~~~~~--~~~~~~~~~~~gH~~~~~--~--~~~~~~i~~fl~~~~~ 311 (319)
+...++.+.. +++++++++|+.|.++.+ . +++.+.+.+|+.+...
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 246 EGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred HHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 8888777765 467899999999997643 3 6789999999988754
No 21
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.96 E-value=8.4e-29 Score=182.14 Aligned_cols=221 Identities=20% Similarity=0.261 Sum_probs=158.5
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEE
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGH 163 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~ 163 (319)
+.+||++||+.++. ...+.+++.|.++||.|.++.+||||......-..+.++|.+|+.+..++|.+.+.+.|.++|.
T Consensus 15 ~~AVLllHGFTGt~--~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTP--RDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCc--HHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 48999999999999 5689999999999999999999999998877777788999999999999999889999999999
Q ss_pred ehhHHHHHHHHhhcCCccEEEEEecccccccch--hhhhchHHHHHhhhcccccccc-CCCcceeeeehhhHHhhhccch
Q 020932 164 SKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGI--EDRLGKDYMEKIMQDGFIDVKN-KTGDVEYRVTEESLMDRLNTNM 240 (319)
Q Consensus 164 S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (319)
||||.+++.+|.++| ++++|.+|++......- .+.+- .+.+............ ......+...+......+....
T Consensus 93 SmGGv~alkla~~~p-~K~iv~m~a~~~~k~~~~iie~~l-~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i 170 (243)
T COG1647 93 SMGGVFALKLAYHYP-PKKIVPMCAPVNVKSWRIIIEGLL-EYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLI 170 (243)
T ss_pred cchhHHHHHHHhhCC-ccceeeecCCcccccchhhhHHHH-HHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHH
Confidence 999999999999998 99999999987643221 11110 0111111100000000 0000000000111111111111
Q ss_pred hhh-hhhccCCCcEEEEecCCCCccCcchHHHHHhhCC--CCeEEEecCCCccCc--ccHHHHHHHHHHHHHh
Q 020932 241 HDA-CLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP--NHKLHVVEGANHGYT--NHQAELVSVVLDFVKA 308 (319)
Q Consensus 241 ~~~-~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~ 308 (319)
... .....|..|+++++|.+|+.+|.+.+..+++... +.++.+++++||.+. .+.+.+.+.+..||+.
T Consensus 171 ~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 171 KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 111 1112568999999999999999999999998874 579999999999975 3468899999999973
No 22
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.96 E-value=8.1e-28 Score=205.27 Aligned_cols=235 Identities=17% Similarity=0.244 Sum_probs=154.6
Q ss_pred CCCceEEEEEEeCCC---ceEEEEEccCCCCCCChhHHH-HHHHHH---HcCceEEEEcCCCCCCCCCCC-CCCChHHHH
Q 020932 69 KYGERLVGVLHDAES---SEIVVLCHGFRSTKDDPSMVN-LAVALQ---NEGISAFRFDFAGNGESEGSF-QYGNYWREA 140 (319)
Q Consensus 69 ~dg~~l~~~~~~~~~---~~~vv~~hG~~~~~~~~~~~~-~~~~l~---~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~ 140 (319)
..|.++++...++.. +++|||+||++++. ..|.. +...|. +.+|+|+++|+||||.|+.+. ...+++.++
T Consensus 183 ~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~--~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a 260 (481)
T PLN03087 183 SSNESLFVHVQQPKDNKAKEDVLFIHGFISSS--AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHL 260 (481)
T ss_pred eCCeEEEEEEecCCCCCCCCeEEEECCCCccH--HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHH
Confidence 346788877776642 57999999999988 45764 445554 368999999999999998653 335677788
Q ss_pred hHHH-HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhh----hh--------------
Q 020932 141 DDLR-AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIED----RL-------------- 200 (319)
Q Consensus 141 ~d~~-~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~----~~-------------- 200 (319)
+++. .+++.+ +.++++++||||||.+++.+|.++|+ |+++|+++++......... ..
T Consensus 261 ~~l~~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (481)
T PLN03087 261 EMIERSVLERY---KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAF 337 (481)
T ss_pred HHHHHHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCcccc
Confidence 8884 677766 77889999999999999999999999 9999999875432211000 00
Q ss_pred c---hHHHHHhhhcc---------ccc----cccCCCcceeee-------ehh---hHHhhhcc-----chhhhhhhccC
Q 020932 201 G---KDYMEKIMQDG---------FID----VKNKTGDVEYRV-------TEE---SLMDRLNT-----NMHDACLQIDM 249 (319)
Q Consensus 201 ~---~~~~~~~~~~~---------~~~----~~~~~~~~~~~~-------~~~---~~~~~~~~-----~~~~~~~~~~~ 249 (319)
. ..+........ ... ............ ... .+...+.. +........++
T Consensus 338 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I 417 (481)
T PLN03087 338 GASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQL 417 (481)
T ss_pred chhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhC
Confidence 0 00000000000 000 000000000000 000 00000000 00000111247
Q ss_pred CCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCc--ccHHHHHHHHHHHHHh
Q 020932 250 ECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT--NHQAELVSVVLDFVKA 308 (319)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~ 308 (319)
++|+|+|+|++|.++|++..+.+.+.+|++++++++++||..+ ++++++++.|.+|.+.
T Consensus 418 ~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 418 KCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999954 6789999999999865
No 23
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.96 E-value=1.4e-27 Score=200.05 Aligned_cols=234 Identities=16% Similarity=0.188 Sum_probs=159.6
Q ss_pred CCCCceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC----CCChHHHHhHH
Q 020932 68 NKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ----YGNYWREADDL 143 (319)
Q Consensus 68 ~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~----~~~~~~~~~d~ 143 (319)
+.+|.++++...+++.+++|||+||++++. ..|..+++.|.+ +|+|+++|+||||.|+.+.. ..+++.+++|+
T Consensus 111 ~~~~~~~~y~~~G~~~~~~ivllHG~~~~~--~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 111 SSDLFRWFCVESGSNNNPPVLLIHGFPSQA--YSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred cCCceEEEEEecCCCCCCeEEEECCCCCCH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHH
Confidence 466888876655555678999999999988 679999999976 69999999999999987643 35778899999
Q ss_pred HHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccccccc-chhh---hhchHHHHHhhh-cc-----
Q 020932 144 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG-GIED---RLGKDYMEKIMQ-DG----- 212 (319)
Q Consensus 144 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-~~~~---~~~~~~~~~~~~-~~----- 212 (319)
.++++.+ +.++++|+|||+||.+++.+|.++|+ |+++|++++...... .... .+.......+.. ..
T Consensus 188 ~~~i~~l---~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~ 264 (383)
T PLN03084 188 ESLIDEL---KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASD 264 (383)
T ss_pred HHHHHHh---CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHh
Confidence 9999988 67789999999999999999999998 999999998753211 0000 000000000000 00
Q ss_pred --ccccccC-C---Cccee--e----e----ehhhHHhhhccchh---hhhh----hccCCCcEEEEecCCCCccCcchH
Q 020932 213 --FIDVKNK-T---GDVEY--R----V----TEESLMDRLNTNMH---DACL----QIDMECSVLTIHGSSDKIIPLQDA 269 (319)
Q Consensus 213 --~~~~~~~-~---~~~~~--~----~----~~~~~~~~~~~~~~---~~~~----~~~~~~P~l~i~g~~D~~~~~~~~ 269 (319)
+...... . ....+ . . ....+...+..... .... ..++++|+++|+|++|.+++.+..
T Consensus 265 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~ 344 (383)
T PLN03084 265 KALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGV 344 (383)
T ss_pred hhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHH
Confidence 0000000 0 00000 0 0 00000111111100 0000 124689999999999999999888
Q ss_pred HHHHhhCCCCeEEEecCCCccCc-ccHHHHHHHHHHHHHh
Q 020932 270 HEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVKA 308 (319)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 308 (319)
+++.+. .+.++++++++||+++ +.++++++.|.+||.+
T Consensus 345 ~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 345 EDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred HHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 888887 4889999999999975 6679999999999863
No 24
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.96 E-value=9.5e-28 Score=188.71 Aligned_cols=246 Identities=20% Similarity=0.228 Sum_probs=166.7
Q ss_pred cccceEEEEEeCCCCceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC--CC
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ--YG 134 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~ 134 (319)
.++..+.+++ +|.++++...+++.+|.|+++||+.... +.|+.....|+.+||+|+++|+||+|.|+.+.. .+
T Consensus 20 ~~~~hk~~~~---~gI~~h~~e~g~~~gP~illlHGfPe~w--yswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Y 94 (322)
T KOG4178|consen 20 SAISHKFVTY---KGIRLHYVEGGPGDGPIVLLLHGFPESW--YSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEY 94 (322)
T ss_pred hhcceeeEEE---ccEEEEEEeecCCCCCEEEEEccCCccc--hhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCccee
Confidence 3444454444 3666665555667899999999999999 679999999999999999999999999998774 46
Q ss_pred ChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccccccc-----chhhhhc-------
Q 020932 135 NYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG-----GIEDRLG------- 201 (319)
Q Consensus 135 ~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~-----~~~~~~~------- 201 (319)
+....+.|+..+++.+ +.++++++||++|+++|+.+|..+|+ |+++|+++.+...+. .......
T Consensus 95 t~~~l~~di~~lld~L---g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~ 171 (322)
T KOG4178|consen 95 TIDELVGDIVALLDHL---GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICL 171 (322)
T ss_pred eHHHHHHHHHHHHHHh---ccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEe
Confidence 7788999999999999 78899999999999999999999999 999999987654110 0000000
Q ss_pred ----------------hHHHHHhhhccccc--cccC-CCcceeeeehhhH------------------Hhhhccch-hhh
Q 020932 202 ----------------KDYMEKIMQDGFID--VKNK-TGDVEYRVTEESL------------------MDRLNTNM-HDA 243 (319)
Q Consensus 202 ----------------~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~------------------~~~~~~~~-~~~ 243 (319)
..+...+...+... .... ........+.+.+ .+.+.... ...
T Consensus 172 fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~ 251 (322)
T KOG4178|consen 172 FQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAP 251 (322)
T ss_pred ccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhcc
Confidence 00000000000000 0000 0000000111111 01111111 011
Q ss_pred hhhccCCCcEEEEecCCCCccCcc-hHHHHHhhCCCC-eEEEecCCCccC-cccHHHHHHHHHHHHHhhc
Q 020932 244 CLQIDMECSVLTIHGSSDKIIPLQ-DAHEFDKIIPNH-KLHVVEGANHGY-TNHQAELVSVVLDFVKASL 310 (319)
Q Consensus 244 ~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~-~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~ 310 (319)
....++++|+++|+|++|.+.+.. ....+.+..++. +.++++|+||+. +++++++++.+..|+++..
T Consensus 252 ~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 252 WALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred ccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 122367999999999999998876 344445556664 788999999997 4778999999999998753
No 25
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.96 E-value=7.8e-28 Score=194.56 Aligned_cols=219 Identities=16% Similarity=0.262 Sum_probs=150.0
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC-CCCChHHHHhHHHHHHHHHHhCCCceEEE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNYWREADDLRAVVQYFCGANRAVGAI 160 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i~~l~~~~~~~i~l 160 (319)
.++|+||++||++++. ..|..+++.|.+ ||+|+++|+||||.|.... ...+++++++++.++++.+ +.+++++
T Consensus 11 ~~~~~iv~lhG~~~~~--~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~l 84 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSG--SYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL---NIERFHF 84 (257)
T ss_pred CCCCEEEEEcCCCcch--hHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh---CCCcEEE
Confidence 3578999999999988 468888888875 5999999999999998653 3457788889999999887 6678999
Q ss_pred EEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhc--hHHHHHhhhccccc----------cccCC-------
Q 020932 161 LGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLG--KDYMEKIMQDGFID----------VKNKT------- 220 (319)
Q Consensus 161 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----------~~~~~------- 220 (319)
+||||||.+++.++.++|+ ++++|++++............. ..+........+.. .....
T Consensus 85 ~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (257)
T TIGR03611 85 VGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAAD 164 (257)
T ss_pred EEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhh
Confidence 9999999999999999998 9999999875443211110000 00000000000000 00000
Q ss_pred -Ccceee-eehhhHHhh----hccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCc-c
Q 020932 221 -GDVEYR-VTEESLMDR----LNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT-N 293 (319)
Q Consensus 221 -~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~ 293 (319)
...... ......... ...+.. ....++++|+++++|++|.++|++.++++.+.+++++++.++++||.+. +
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 242 (257)
T TIGR03611 165 EAHALAHFPGKANVLRRINALEAFDVS--ARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVT 242 (257)
T ss_pred hhhcccccCccHHHHHHHHHHHcCCcH--HHhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCcccc
Confidence 000000 000011110 001111 1122568999999999999999999999999999999999999999964 6
Q ss_pred cHHHHHHHHHHHHHh
Q 020932 294 HQAELVSVVLDFVKA 308 (319)
Q Consensus 294 ~~~~~~~~i~~fl~~ 308 (319)
+++++.+.|.+||++
T Consensus 243 ~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 243 DPETFNRALLDFLKT 257 (257)
T ss_pred CHHHHHHHHHHHhcC
Confidence 789999999999863
No 26
>PLN02578 hydrolase
Probab=99.96 E-value=8.1e-28 Score=202.40 Aligned_cols=228 Identities=17% Similarity=0.228 Sum_probs=154.6
Q ss_pred CCceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHH
Q 020932 70 YGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQY 149 (319)
Q Consensus 70 dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~ 149 (319)
+|.++++. ..+++++||++||++++. ..|..+.+.|++. |+|+++|+||||.|+++....+...+++++.++++.
T Consensus 74 ~~~~i~Y~--~~g~g~~vvliHG~~~~~--~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~ 148 (354)
T PLN02578 74 RGHKIHYV--VQGEGLPIVLIHGFGASA--FHWRYNIPELAKK-YKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKE 148 (354)
T ss_pred CCEEEEEE--EcCCCCeEEEECCCCCCH--HHHHHHHHHHhcC-CEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHH
Confidence 36666644 445678899999999987 5688889999765 999999999999999876556777788899998888
Q ss_pred HHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchh----------hhhc----hH---HHHHhh--
Q 020932 150 FCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIE----------DRLG----KD---YMEKIM-- 209 (319)
Q Consensus 150 l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~----------~~~~----~~---~~~~~~-- 209 (319)
+ ..++++++|||+||.+++.+|.++|+ ++++|++++......... .... .. ......
T Consensus 149 ~---~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (354)
T PLN02578 149 V---VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLG 225 (354)
T ss_pred h---ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHH
Confidence 7 55679999999999999999999999 999999986432211000 0000 00 000000
Q ss_pred ----------------hccccccccCCCcce------eee---ehhhHHhhhc------cchhhhhhhccCCCcEEEEec
Q 020932 210 ----------------QDGFIDVKNKTGDVE------YRV---TEESLMDRLN------TNMHDACLQIDMECSVLTIHG 258 (319)
Q Consensus 210 ----------------~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~------~~~~~~~~~~~~~~P~l~i~g 258 (319)
...+..... ..... ... ....+...+. ..........++++|+++|+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G 304 (354)
T PLN02578 226 FLFWQAKQPSRIESVLKSVYKDKSN-VDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWG 304 (354)
T ss_pred HHHHHhcCHHHHHHHHHHhcCCccc-CCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEe
Confidence 000000000 00000 000 0000000000 011111112357999999999
Q ss_pred CCCCccCcchHHHHHhhCCCCeEEEecCCCccCc-ccHHHHHHHHHHHHH
Q 020932 259 SSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVK 307 (319)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~ 307 (319)
++|.+++.+.++++.+.+++++++++ ++||+++ ++++++.+.|.+|++
T Consensus 305 ~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 305 DLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 99999999999999999999999999 5899975 678999999999986
No 27
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.96 E-value=2e-28 Score=179.04 Aligned_cols=252 Identities=17% Similarity=0.188 Sum_probs=191.1
Q ss_pred cccceeeeccccccccccccccccccCCCCccccceEEEEEeCCCCceEEEEEEeC-CCceEEEEEccCCCCCCChhHHH
Q 020932 26 FLCQVRIVSSTNRSRSFRRSLKMSQSVSPQNLAVKQQELVIPNKYGERLVGVLHDA-ESSEIVVLCHGFRSTKDDPSMVN 104 (319)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~ 104 (319)
+-.|..++|++.+ +.+| ...+.|...+++.+++++.+.|..++..++... .+.|+++++|+..++.. ...+
T Consensus 25 Y~yQ~~LvYps~p----qgsR--~~vptP~~~n~pye~i~l~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmG--hr~~ 96 (300)
T KOG4391|consen 25 YKYQKTLVYPSFP----QGSR--ENVPTPKEFNMPYERIELRTRDKVTLDAYLMLSESSRPTLLYFHANAGNMG--HRLP 96 (300)
T ss_pred HHHhceeeccCcc----cccc--cCCCCccccCCCceEEEEEcCcceeEeeeeecccCCCceEEEEccCCCccc--chhh
Confidence 4468889998854 5566 777788889999999999999999999887654 37899999999999985 3555
Q ss_pred HHHHH-HHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-
Q 020932 105 LAVAL-QNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND- 179 (319)
Q Consensus 105 ~~~~l-~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~- 179 (319)
.+..+ ..-+.+|+.+++||+|.|.+.+.... ..-|..++++++..+ +..+++++|-|+||.+|+.+|++..+
T Consensus 97 i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~G---L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r 173 (300)
T KOG4391|consen 97 IARVFYVNLKMNVLIVSYRGYGKSEGSPSEEG---LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR 173 (300)
T ss_pred HHHHHHHHcCceEEEEEeeccccCCCCccccc---eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhh
Confidence 55555 44489999999999999999886644 367888999999877 56789999999999999999999887
Q ss_pred ccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecC
Q 020932 180 IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGS 259 (319)
Q Consensus 180 v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 259 (319)
+.++|+-++....+......+.......+.. ....+.+..... . .+.+.|.|++.|.
T Consensus 174 i~~~ivENTF~SIp~~~i~~v~p~~~k~i~~-------------------lc~kn~~~S~~k--i--~~~~~P~LFiSGl 230 (300)
T KOG4391|consen 174 ISAIIVENTFLSIPHMAIPLVFPFPMKYIPL-------------------LCYKNKWLSYRK--I--GQCRMPFLFISGL 230 (300)
T ss_pred eeeeeeechhccchhhhhheeccchhhHHHH-------------------HHHHhhhcchhh--h--ccccCceEEeecC
Confidence 9999999987766443322221100000000 000001110000 0 0337899999999
Q ss_pred CCCccCcchHHHHHhhCCC--CeEEEecCCCccCcccHHHHHHHHHHHHHhhcC
Q 020932 260 SDKIIPLQDAHEFDKIIPN--HKLHVVEGANHGYTNHQAELVSVVLDFVKASLK 311 (319)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 311 (319)
+|.+||+-..+.+++.++. .++.++|++.|.-....+-+++.|.+||.+...
T Consensus 231 kDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 231 KDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVVK 284 (300)
T ss_pred ccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHHhcc
Confidence 9999999999999999984 689999999999766667899999999988654
No 28
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=1.5e-27 Score=192.07 Aligned_cols=226 Identities=17% Similarity=0.216 Sum_probs=151.2
Q ss_pred EEEEEeCC-CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC
Q 020932 75 VGVLHDAE-SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA 153 (319)
Q Consensus 75 ~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~ 153 (319)
++...+++ ++|+||++||++.+. ..|..+++.|. .||+|+++|+||||.|+......++.++++|+.++++.+
T Consensus 3 ~~~~~g~~~~~~~li~~hg~~~~~--~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~--- 76 (251)
T TIGR02427 3 HYRLDGAADGAPVLVFINSLGTDL--RMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL--- 76 (251)
T ss_pred eEEeecCCCCCCeEEEEcCcccch--hhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Confidence 33333444 578999999999988 46888998886 479999999999999976655567888899999999877
Q ss_pred CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccc--hhhhhc-------hHHHHHhhhccccccccCCCcc
Q 020932 154 NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG--IEDRLG-------KDYMEKIMQDGFIDVKNKTGDV 223 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 223 (319)
+.++++++|||+||.+++.+|.++|+ ++++|++++....... ...... ...........+..........
T Consensus 77 ~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (251)
T TIGR02427 77 GIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPA 156 (251)
T ss_pred CCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChH
Confidence 66789999999999999999999988 9999998865432211 000000 0000000000000000000000
Q ss_pred e---e-----eeehhhHHh---hhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccC-
Q 020932 224 E---Y-----RVTEESLMD---RLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY- 291 (319)
Q Consensus 224 ~---~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~- 291 (319)
. + ......+.. .+. .........++++|+++++|++|.++|.+..+.+.+.+++.++++++++||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 235 (251)
T TIGR02427 157 RLDLYRNMLVRQPPDGYAGCCAAIR-DADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPC 235 (251)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHh-cccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCccc
Confidence 0 0 000000000 000 00001111256899999999999999999999999999999999999999996
Q ss_pred cccHHHHHHHHHHHHH
Q 020932 292 TNHQAELVSVVLDFVK 307 (319)
Q Consensus 292 ~~~~~~~~~~i~~fl~ 307 (319)
.++++++.+.+.+|++
T Consensus 236 ~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 236 VEQPEAFNAALRDFLR 251 (251)
T ss_pred ccChHHHHHHHHHHhC
Confidence 4778899999999974
No 29
>PLN02511 hydrolase
Probab=99.96 E-value=3.7e-27 Score=199.78 Aligned_cols=255 Identities=18% Similarity=0.175 Sum_probs=163.3
Q ss_pred ccceEEEEEeCCCCceEEEEEEe------CCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC
Q 020932 58 AVKQQELVIPNKYGERLVGVLHD------AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF 131 (319)
Q Consensus 58 ~~~~~~~~~~~~dg~~l~~~~~~------~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 131 (319)
.+..++..+.+.||..+...+.. +..+|+||++||+++++...++..++..+.++||+|+++|+||||.|....
T Consensus 68 ~~~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 68 AVRYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred CCceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC
Confidence 34556667888899888865543 235789999999988775434567778888899999999999999997543
Q ss_pred CCCChHHHHhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC---ccEEEEEecccccccch---hh----hh
Q 020932 132 QYGNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND---IRTFVNVSGRYDLKGGI---ED----RL 200 (319)
Q Consensus 132 ~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~~~~~---~~----~~ 200 (319)
.........+|+.++++++..+ +..+++++||||||.+++.++.++++ |.++++++++.+..... .. ..
T Consensus 148 ~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~~~~y 227 (388)
T PLN02511 148 PQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGFNNVY 227 (388)
T ss_pred cCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccHHHHH
Confidence 3222345688999999999775 33579999999999999999999875 78888888766531110 00 11
Q ss_pred chHHHHHhh---hc---cccccccCCC--cceeeeehhhHHhhhcc-----c----h----hhhhhhccCCCcEEEEecC
Q 020932 201 GKDYMEKIM---QD---GFIDVKNKTG--DVEYRVTEESLMDRLNT-----N----M----HDACLQIDMECSVLTIHGS 259 (319)
Q Consensus 201 ~~~~~~~~~---~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~----~----~~~~~~~~~~~P~l~i~g~ 259 (319)
...+...+. .. .+........ ..........+.+.+.. . . .......++++|+|+|+|+
T Consensus 228 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~ 307 (388)
T PLN02511 228 DKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAA 307 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcC
Confidence 111111110 00 0000000000 00000000111111100 0 0 0011123579999999999
Q ss_pred CCCccCcchH-HHHHhhCCCCeEEEecCCCccCc-ccHHH------HHHHHHHHHHhhcCC
Q 020932 260 SDKIIPLQDA-HEFDKIIPNHKLHVVEGANHGYT-NHQAE------LVSVVLDFVKASLKQ 312 (319)
Q Consensus 260 ~D~~~~~~~~-~~~~~~~~~~~~~~~~~~gH~~~-~~~~~------~~~~i~~fl~~~~~~ 312 (319)
+|+++|.+.. ....+..+++++++++++||..+ +.++. +.+.+.+||+.....
T Consensus 308 dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 308 NDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred CCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 9999987754 45667789999999999999964 44432 588899999876543
No 30
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.96 E-value=2.1e-26 Score=195.87 Aligned_cols=237 Identities=17% Similarity=0.155 Sum_probs=160.6
Q ss_pred cccceEEEEEeCCCCceEEEEEEeCC---CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCC
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY 133 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~ 133 (319)
.+...++++|+..+|.++.++++.|. +.|+||++||+++... ..|..+++.|+++||+|+++|+||+|.|......
T Consensus 164 ~~~~~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~-~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~ 242 (414)
T PRK05077 164 LPGELKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQT-DYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLT 242 (414)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchh-hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCcc
Confidence 34467899999988888999887653 4577777777766543 2577889999999999999999999999754321
Q ss_pred CChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccch---hhhhchHHHH
Q 020932 134 GNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI---EDRLGKDYME 206 (319)
Q Consensus 134 ~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~---~~~~~~~~~~ 206 (319)
.+. .....++++++... +.++|+++|||+||++++.+|...|+ |+++|++++........ ...+......
T Consensus 243 ~d~---~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~~ 319 (414)
T PRK05077 243 QDS---SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYLD 319 (414)
T ss_pred ccH---HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHHH
Confidence 222 22234667777655 56789999999999999999998886 99999999876421100 0001100111
Q ss_pred Hhhhc-cccccccCCCcceeeeehhhHHhhhccch--hhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEE
Q 020932 207 KIMQD-GFIDVKNKTGDVEYRVTEESLMDRLNTNM--HDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHV 283 (319)
Q Consensus 207 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 283 (319)
.+... +.. ......+...+.... .......++++|+|+|+|++|.++|.+.++.+.+..++.++++
T Consensus 320 ~la~~lg~~-----------~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~ 388 (414)
T PRK05077 320 VLASRLGMH-----------DASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLE 388 (414)
T ss_pred HHHHHhCCC-----------CCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEE
Confidence 11000 000 001111111111000 0000112568999999999999999999999999999999999
Q ss_pred ecCCCccCcccHHHHHHHHHHHHHhhc
Q 020932 284 VEGANHGYTNHQAELVSVVLDFVKASL 310 (319)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~i~~fl~~~~ 310 (319)
++++ | ..+.++++.+.+.+||++.+
T Consensus 389 i~~~-~-~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 389 IPFK-P-VYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred ccCC-C-ccCCHHHHHHHHHHHHHHHh
Confidence 9986 3 24578999999999999875
No 31
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.95 E-value=4.9e-27 Score=189.73 Aligned_cols=214 Identities=17% Similarity=0.224 Sum_probs=138.8
Q ss_pred CCc-eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEE
Q 020932 82 ESS-EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAI 160 (319)
Q Consensus 82 ~~~-~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l 160 (319)
|++ |+|||+||++++. ..|..+.+.|.++ |+|+++|+||||.|+... ..+.++.++++. ....+++++
T Consensus 10 G~g~~~ivllHG~~~~~--~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~l~-------~~~~~~~~l 78 (256)
T PRK10349 10 GQGNVHLVLLHGWGLNA--EVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG-ALSLADMAEAVL-------QQAPDKAIW 78 (256)
T ss_pred CCCCCeEEEECCCCCCh--hHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC-CCCHHHHHHHHH-------hcCCCCeEE
Confidence 444 4699999999998 6799999999876 999999999999997543 234444443332 225678999
Q ss_pred EEEehhHHHHHHHHhhcCC-ccEEEEEecccccccc-----hhhhhchHHHHHhhh---c---cccc---cccCCCcce-
Q 020932 161 LGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG-----IEDRLGKDYMEKIMQ---D---GFID---VKNKTGDVE- 224 (319)
Q Consensus 161 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~---~~~~---~~~~~~~~~- 224 (319)
+||||||.+|+.+|.++|+ |+++|++++....... ........+...+.. . .+.. .........
T Consensus 79 vGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (256)
T PRK10349 79 LGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDA 158 (256)
T ss_pred EEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHH
Confidence 9999999999999999998 9999999874322110 000000000000000 0 0000 000000000
Q ss_pred --------e-ee-ehhhHH---hhh-ccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCcc
Q 020932 225 --------Y-RV-TEESLM---DRL-NTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHG 290 (319)
Q Consensus 225 --------~-~~-~~~~~~---~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (319)
. .. ....+. ..+ ..+.. ....++++|+|+++|++|.++|.+.++.+.+.++++++++++++||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~ 236 (256)
T PRK10349 159 RALKKTVLALPMPEVDVLNGGLEILKTVDLR--QPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHA 236 (256)
T ss_pred HHHHHHhhccCCCcHHHHHHHHHHHHhCccH--HHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCC
Confidence 0 00 000000 000 01111 12235799999999999999999999999999999999999999999
Q ss_pred Cc-ccHHHHHHHHHHHHHh
Q 020932 291 YT-NHQAELVSVVLDFVKA 308 (319)
Q Consensus 291 ~~-~~~~~~~~~i~~fl~~ 308 (319)
++ ++++++.+.+.+|-++
T Consensus 237 ~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 237 PFISHPAEFCHLLVALKQR 255 (256)
T ss_pred ccccCHHHHHHHHHHHhcc
Confidence 75 7789999999888653
No 32
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.95 E-value=5e-26 Score=184.36 Aligned_cols=231 Identities=13% Similarity=0.151 Sum_probs=150.2
Q ss_pred CCceEEEEEEeC-CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC-CCCChHHHHhHHHHHH
Q 020932 70 YGERLVGVLHDA-ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNYWREADDLRAVV 147 (319)
Q Consensus 70 dg~~l~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i 147 (319)
+|.++. +..+ +++|+|||+||++.+. +.|..+...|.++||+|+++|+||||.|.... ...++++.++++.+++
T Consensus 5 ~~~~~~--~~~~~~~~p~vvliHG~~~~~--~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i 80 (273)
T PLN02211 5 NGEEVT--DMKPNRQPPHFVLIHGISGGS--WCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFL 80 (273)
T ss_pred cccccc--cccccCCCCeEEEECCCCCCc--CcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHH
Confidence 355555 3345 5788999999999998 56999999999889999999999999876443 2357788888888888
Q ss_pred HHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccc-hhhhhchHHHHHhhh-ccc----ccc-ccC
Q 020932 148 QYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG-IEDRLGKDYMEKIMQ-DGF----IDV-KNK 219 (319)
Q Consensus 148 ~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~----~~~-~~~ 219 (319)
+.+. ..++++|+||||||.++..++..+|+ |+++|++++....... ........+ ..+.. ... ... ...
T Consensus 81 ~~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 157 (273)
T PLN02211 81 SSLP--ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGV-PDLSEFGDVYELGFGLGPDQ 157 (273)
T ss_pred HhcC--CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccc-cchhhhccceeeeeccCCCC
Confidence 7652 24689999999999999999999988 9999999875321110 000000000 00000 000 000 000
Q ss_pred CCcc-----------eeeeehhhHH----hhhcc---chhhh----hhhccC-CCcEEEEecCCCCccCcchHHHHHhhC
Q 020932 220 TGDV-----------EYRVTEESLM----DRLNT---NMHDA----CLQIDM-ECSVLTIHGSSDKIIPLQDAHEFDKII 276 (319)
Q Consensus 220 ~~~~-----------~~~~~~~~~~----~~~~~---~~~~~----~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~ 276 (319)
.... .+...+.... ..... ..... .....+ ++|+++|.|++|..+|++..+.+.+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~ 237 (273)
T PLN02211 158 PPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRW 237 (273)
T ss_pred CCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhC
Confidence 0000 0000000000 00000 00000 000123 789999999999999999999999999
Q ss_pred CCCeEEEecCCCccC-cccHHHHHHHHHHHHHh
Q 020932 277 PNHKLHVVEGANHGY-TNHQAELVSVVLDFVKA 308 (319)
Q Consensus 277 ~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~ 308 (319)
++.+++.++ +||.+ ++.++++.+.|.+....
T Consensus 238 ~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 238 PPSQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred CccEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 988999997 89996 57889999988877554
No 33
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.95 E-value=3.5e-26 Score=187.93 Aligned_cols=233 Identities=19% Similarity=0.189 Sum_probs=149.0
Q ss_pred CCceEEEEEEeC-CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC---CCChHHHHhHHHH
Q 020932 70 YGERLVGVLHDA-ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ---YGNYWREADDLRA 145 (319)
Q Consensus 70 dg~~l~~~~~~~-~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---~~~~~~~~~d~~~ 145 (319)
+|..+.+....+ +.+++||++||++++.. ..|..+...|.+.||+|+++|+||+|.|..... ..+++.+++|+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 88 (288)
T TIGR01250 10 DGGYHLFTKTGGEGEKIKLLLLHGGPGMSH-EYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEE 88 (288)
T ss_pred CCCeEEEEeccCCCCCCeEEEEcCCCCccH-HHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHH
Confidence 355555444443 34789999999876664 356677777776699999999999999986532 2567888899988
Q ss_pred HHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchh------hhhchHHHHHhhh---cc-cc
Q 020932 146 VVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIE------DRLGKDYMEKIMQ---DG-FI 214 (319)
Q Consensus 146 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~------~~~~~~~~~~~~~---~~-~~ 214 (319)
+++.+ +.++++++||||||.+++.++..+|+ ++++|++++......... ..+.......+.. .. +.
T Consensus 89 ~~~~~---~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (288)
T TIGR01250 89 VREKL---GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELPPEVRAAIKRCEASGDYD 165 (288)
T ss_pred HHHHc---CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcChhHHHHHHHHHhccCcc
Confidence 88877 66779999999999999999999998 999999887543221110 0000000000000 00 00
Q ss_pred c-----cccC-C--CcceeeeehhhHHhh-----------hc-----------cchhhhhhhccCCCcEEEEecCCCCcc
Q 020932 215 D-----VKNK-T--GDVEYRVTEESLMDR-----------LN-----------TNMHDACLQIDMECSVLTIHGSSDKII 264 (319)
Q Consensus 215 ~-----~~~~-~--~~~~~~~~~~~~~~~-----------~~-----------~~~~~~~~~~~~~~P~l~i~g~~D~~~ 264 (319)
. .... . ............... .. ..........++++|+++++|++|.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~- 244 (288)
T TIGR01250 166 NPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM- 244 (288)
T ss_pred hHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-
Confidence 0 0000 0 000000000000000 00 00000111125689999999999985
Q ss_pred CcchHHHHHhhCCCCeEEEecCCCccC-cccHHHHHHHHHHHHH
Q 020932 265 PLQDAHEFDKIIPNHKLHVVEGANHGY-TNHQAELVSVVLDFVK 307 (319)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~ 307 (319)
+++..+.+.+.+++.++++++++||+. .++++++.+.|.+||+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 245 TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 567888888889999999999999996 4778999999999984
No 34
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.95 E-value=3.4e-26 Score=183.40 Aligned_cols=211 Identities=15% Similarity=0.203 Sum_probs=137.6
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEE
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGH 163 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~ 163 (319)
+|+|||+||++++. ..|..+++.| + +|+|+++|+||||.|+.... .+++.+++|+.++++.+ +.++++++||
T Consensus 2 ~p~vvllHG~~~~~--~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~~---~~~~~~lvG~ 73 (242)
T PRK11126 2 LPWLVFLHGLLGSG--QDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQSY---NILPYWLVGY 73 (242)
T ss_pred CCEEEEECCCCCCh--HHHHHHHHHc-C-CCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHHc---CCCCeEEEEE
Confidence 57899999999998 6799999988 3 59999999999999986543 47788899999999877 7788999999
Q ss_pred ehhHHHHHHHHhhcC-C-ccEEEEEecccccccchhh---hh-chHHHHHhhhcc-------------ccccccCCCcc-
Q 020932 164 SKGGSVVLLYASKYN-D-IRTFVNVSGRYDLKGGIED---RL-GKDYMEKIMQDG-------------FIDVKNKTGDV- 223 (319)
Q Consensus 164 S~Gg~~a~~~a~~~p-~-v~~~v~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~-------------~~~~~~~~~~~- 223 (319)
||||.+|+.+|.++| + |++++++++.......... .. ...+...+.... +..........
T Consensus 74 S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (242)
T PRK11126 74 SLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQL 153 (242)
T ss_pred CHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHH
Confidence 999999999999985 4 9999998876533221100 00 001111000000 00000000000
Q ss_pred -e-ee-eehhhHHhhh-----ccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCc-cc
Q 020932 224 -E-YR-VTEESLMDRL-----NTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT-NH 294 (319)
Q Consensus 224 -~-~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~ 294 (319)
. .. .........+ ...........++++|+++++|++|..+. .+.+. .++++++++++||+++ ++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~~i~~~gH~~~~e~ 227 (242)
T PRK11126 154 VAKRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALPLHVIPNAGHNAHREN 227 (242)
T ss_pred HHhcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHH-hcCeEEEeCCCCCchhhhC
Confidence 0 00 0000000000 00001111223679999999999998652 22333 3789999999999975 77
Q ss_pred HHHHHHHHHHHHHh
Q 020932 295 QAELVSVVLDFVKA 308 (319)
Q Consensus 295 ~~~~~~~i~~fl~~ 308 (319)
++++.+.|.+|+++
T Consensus 228 p~~~~~~i~~fl~~ 241 (242)
T PRK11126 228 PAAFAASLAQILRL 241 (242)
T ss_pred hHHHHHHHHHHHhh
Confidence 89999999999975
No 35
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=2.9e-26 Score=188.03 Aligned_cols=223 Identities=21% Similarity=0.248 Sum_probs=143.8
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCC-CCC-CCChHHHHhHHHHHHHHHHhCCCceEE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEG-SFQ-YGNYWREADDLRAVVQYFCGANRAVGA 159 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~-~~~-~~~~~~~~~d~~~~i~~l~~~~~~~i~ 159 (319)
.+++||++||++++. +.|......|.+. |+.|+++|++|+|.++. +.. .++...+++-+..+.... ...+++
T Consensus 57 ~~~pvlllHGF~~~~--~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~---~~~~~~ 131 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASS--FSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV---FVEPVS 131 (326)
T ss_pred CCCcEEEeccccCCc--ccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh---cCcceE
Confidence 689999999999988 6799999999777 69999999999995443 332 234344444444444444 566799
Q ss_pred EEEEehhHHHHHHHHhhcCC-ccEEE---EEecccccccchhhhhchHHHHHhhhccc------cccc------------
Q 020932 160 ILGHSKGGSVVLLYASKYND-IRTFV---NVSGRYDLKGGIEDRLGKDYMEKIMQDGF------IDVK------------ 217 (319)
Q Consensus 160 l~G~S~Gg~~a~~~a~~~p~-v~~~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~------------ 217 (319)
++|||+||.+|+.+|+.+|+ |++++ ++++......................... ....
T Consensus 132 lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 211 (326)
T KOG1454|consen 132 LVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLK 211 (326)
T ss_pred EEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhccee
Confidence 99999999999999999999 99999 66665443332211111111000000000 0000
Q ss_pred cC--CCccee-------------eeehhhHHhhh---cc-chhhhhhhccC-CCcEEEEecCCCCccCcchHHHHHhhCC
Q 020932 218 NK--TGDVEY-------------RVTEESLMDRL---NT-NMHDACLQIDM-ECSVLTIHGSSDKIIPLQDAHEFDKIIP 277 (319)
Q Consensus 218 ~~--~~~~~~-------------~~~~~~~~~~~---~~-~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (319)
.. ...... ..........+ .. +........++ ++|+|+++|++|+++|.+.+..+.+.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p 291 (326)
T KOG1454|consen 212 VVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLP 291 (326)
T ss_pred eeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCC
Confidence 00 000000 00000000000 00 01111111233 4999999999999999999999999899
Q ss_pred CCeEEEecCCCccCc-ccHHHHHHHHHHHHHhhc
Q 020932 278 NHKLHVVEGANHGYT-NHQAELVSVVLDFVKASL 310 (319)
Q Consensus 278 ~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 310 (319)
++++++++++||..+ +.++++++.|..|+.+..
T Consensus 292 n~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 292 NAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred CceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 999999999999986 578999999999998753
No 36
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=1.4e-25 Score=186.55 Aligned_cols=242 Identities=19% Similarity=0.235 Sum_probs=157.5
Q ss_pred EeCCCCceEEEEEEeCC-CceEEEEEccCCCCCCChh------------------------HHHHHHHHHHcCceEEEEc
Q 020932 66 IPNKYGERLVGVLHDAE-SSEIVVLCHGFRSTKDDPS------------------------MVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 66 ~~~~dg~~l~~~~~~~~-~~~~vv~~hG~~~~~~~~~------------------------~~~~~~~l~~~G~~v~~~d 120 (319)
+.+.||..|.++.+.+. ++.+|+++||++.+....+ ...+++.|.++||.|+++|
T Consensus 2 ~~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D 81 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLD 81 (332)
T ss_pred ccCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEec
Confidence 45678999998877664 6789999999999885211 1467999999999999999
Q ss_pred CCCCCCCCCCCC----CCChHHHHhHHHHHHHHHHh-------------------C-C-CceEEEEEEehhHHHHHHHHh
Q 020932 121 FAGNGESEGSFQ----YGNYWREADDLRAVVQYFCG-------------------A-N-RAVGAILGHSKGGSVVLLYAS 175 (319)
Q Consensus 121 ~~G~G~s~~~~~----~~~~~~~~~d~~~~i~~l~~-------------------~-~-~~~i~l~G~S~Gg~~a~~~a~ 175 (319)
+||||.|.+... ..++++.++|+..+++.+.+ . . ..+++++||||||.+++.++.
T Consensus 82 ~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~ 161 (332)
T TIGR01607 82 LQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLE 161 (332)
T ss_pred ccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHH
Confidence 999999986421 24788889999999998754 1 1 357999999999999999886
Q ss_pred hcC---------CccEEEEEecccccccch------hhhhchHHHHH---hhhcc-ccc---cccC-C-------Cccee
Q 020932 176 KYN---------DIRTFVNVSGRYDLKGGI------EDRLGKDYMEK---IMQDG-FID---VKNK-T-------GDVEY 225 (319)
Q Consensus 176 ~~p---------~v~~~v~~~~~~~~~~~~------~~~~~~~~~~~---~~~~~-~~~---~~~~-~-------~~~~~ 225 (319)
.++ .++++|+++|........ ........... +.... ... .... . ....+
T Consensus 162 ~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~ 241 (332)
T TIGR01607 162 LLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRY 241 (332)
T ss_pred HhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhcCcccc
Confidence 542 388999898876432110 00000011111 10000 000 0000 0 00000
Q ss_pred --eeehhhHHhhhccch--hhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhC--CCCeEEEecCCCccCccc--HHH
Q 020932 226 --RVTEESLMDRLNTNM--HDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII--PNHKLHVVEGANHGYTNH--QAE 297 (319)
Q Consensus 226 --~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~--~~~ 297 (319)
..........+.... .........++|+|+++|++|.+++++.++.+++.. ++++++++++++|.++.+ .++
T Consensus 242 ~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~ 321 (332)
T TIGR01607 242 DGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEE 321 (332)
T ss_pred CCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHH
Confidence 001111111111100 011111223799999999999999999999888765 468999999999998644 578
Q ss_pred HHHHHHHHHH
Q 020932 298 LVSVVLDFVK 307 (319)
Q Consensus 298 ~~~~i~~fl~ 307 (319)
+.+.|.+||+
T Consensus 322 v~~~i~~wL~ 331 (332)
T TIGR01607 322 VLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHhh
Confidence 9999999986
No 37
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.95 E-value=2.1e-27 Score=188.26 Aligned_cols=208 Identities=25% Similarity=0.355 Sum_probs=141.6
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC--CCChHHHHhHHHHHHHHHHhCCCceEEEEEEe
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ--YGNYWREADDLRAVVQYFCGANRAVGAILGHS 164 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 164 (319)
|||+||++++. ..|..+++.|+ +||+|+++|+||+|.|..... ..+++++++|+.++++.+ +.++++++|||
T Consensus 1 vv~~hG~~~~~--~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~lvG~S 74 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL---GIKKVILVGHS 74 (228)
T ss_dssp EEEE-STTTTG--GGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT---TTSSEEEEEET
T ss_pred eEEECCCCCCH--HHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc---ccccccccccc
Confidence 79999999999 57999999995 799999999999999987653 456788889999988887 55789999999
Q ss_pred hhHHHHHHHHhhcCC-ccEEEEEecccccccch----hhhhchHH-------HHHhhhccccccccCC-Ccceeeeehhh
Q 020932 165 KGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI----EDRLGKDY-------MEKIMQDGFIDVKNKT-GDVEYRVTEES 231 (319)
Q Consensus 165 ~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~----~~~~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 231 (319)
+||.+++.++.++|+ |+++|++++........ ...+.... ...+....+....... ...........
T Consensus 75 ~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (228)
T PF12697_consen 75 MGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRA 154 (228)
T ss_dssp HHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccc
Confidence 999999999999998 99999999987543211 00000000 0011111110000000 00000001111
Q ss_pred HHhhhcc---chhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccC-cccHHHHHH
Q 020932 232 LMDRLNT---NMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TNHQAELVS 300 (319)
Q Consensus 232 ~~~~~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~ 300 (319)
+...+.. ..........+++|+++++|++|.+++.+..+.+.+.++++++++++++||++ .++++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 155 LAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHH
T ss_pred cccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhc
Confidence 1111111 01111122256899999999999999989999999999999999999999996 467777765
No 38
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=1.1e-25 Score=177.48 Aligned_cols=243 Identities=18% Similarity=0.193 Sum_probs=149.3
Q ss_pred eEEEEEeCCCCceEEEEEEe--CCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCCh-H
Q 020932 61 QQELVIPNKYGERLVGVLHD--AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNY-W 137 (319)
Q Consensus 61 ~~~~~~~~~dg~~l~~~~~~--~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~-~ 137 (319)
.+.+.+. ++..+...-.. +..++++|++||+|.+. .+|..-.+.|++ .++|+++|++|+|.|+.+.-..+. .
T Consensus 67 ~~~v~i~--~~~~iw~~~~~~~~~~~~plVliHGyGAg~--g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~ 141 (365)
T KOG4409|consen 67 KKYVRIP--NGIEIWTITVSNESANKTPLVLIHGYGAGL--GLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTT 141 (365)
T ss_pred eeeeecC--CCceeEEEeecccccCCCcEEEEeccchhH--HHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCccc
Confidence 3444443 44444433332 24678999999999998 568788889988 499999999999999977632222 2
Q ss_pred HHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchh----hh-------------
Q 020932 138 READDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIE----DR------------- 199 (319)
Q Consensus 138 ~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~----~~------------- 199 (319)
....-+..+-+|-.+.+.++.+|+|||+||++|..||.++|+ |+.+|+++|......... ..
T Consensus 142 ~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~ 221 (365)
T KOG4409|consen 142 AEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVA 221 (365)
T ss_pred chHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhh
Confidence 222344444455556699999999999999999999999999 999999999654332200 00
Q ss_pred --------------hchHHHHHhhhccccccccCCCcce-----e-----eeehhhHHh-hh------ccchhhhhhhcc
Q 020932 200 --------------LGKDYMEKIMQDGFIDVKNKTGDVE-----Y-----RVTEESLMD-RL------NTNMHDACLQID 248 (319)
Q Consensus 200 --------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~-~~------~~~~~~~~~~~~ 248 (319)
++..+...+....+........... + .-..+.... .+ ...+.......+
T Consensus 222 ~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~ 301 (365)
T KOG4409|consen 222 TNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELK 301 (365)
T ss_pred hcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhc
Confidence 0111111111111111111000000 0 000000000 00 011112222234
Q ss_pred CCCcEEEEecCCCCccCcchHHHHHhh--CCCCeEEEecCCCccC-cccHHHHHHHHHHHHHhh
Q 020932 249 MECSVLTIHGSSDKIIPLQDAHEFDKI--IPNHKLHVVEGANHGY-TNHQAELVSVVLDFVKAS 309 (319)
Q Consensus 249 ~~~P~l~i~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~ 309 (319)
.++|+++|+|++|.+ +.....++.+. ...++.+++|++||.. .++++.+++.+..++++.
T Consensus 302 ~~~pv~fiyG~~dWm-D~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 302 KDVPVTFIYGDRDWM-DKNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred cCCCEEEEecCcccc-cchhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 469999999999976 45555555553 2358999999999995 688899999999998753
No 39
>PRK10985 putative hydrolase; Provisional
Probab=99.95 E-value=1.4e-25 Score=186.59 Aligned_cols=251 Identities=16% Similarity=0.135 Sum_probs=158.3
Q ss_pred ceEEEEEeCCCCceEEEEEEe-C---CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCC
Q 020932 60 KQQELVIPNKYGERLVGVLHD-A---ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGN 135 (319)
Q Consensus 60 ~~~~~~~~~~dg~~l~~~~~~-~---~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 135 (319)
..++..+...||..+...+.. + .++|+||++||++++....++..+++.|.++||+|+++|+||||.+........
T Consensus 30 ~~~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~ 109 (324)
T PRK10985 30 TPYWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIY 109 (324)
T ss_pred CcceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceE
Confidence 334445667788777665542 2 246899999999987654456778999999999999999999998764322111
Q ss_pred hHHHHhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcC-C--ccEEEEEecccccccchh-------hhhchHH
Q 020932 136 YWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYN-D--IRTFVNVSGRYDLKGGIE-------DRLGKDY 204 (319)
Q Consensus 136 ~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p-~--v~~~v~~~~~~~~~~~~~-------~~~~~~~ 204 (319)
.....+|+..+++++.++ +..+++++||||||.+++.+++.++ + ++++|+++++.+...... ......+
T Consensus 110 ~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l 189 (324)
T PRK10985 110 HSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYL 189 (324)
T ss_pred CCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHH
Confidence 123478899999988775 5668999999999998888877764 3 899999999876442211 1111111
Q ss_pred HHHhhhcc---ccccccCC--C-ccee-eeehhhH--------------HhhhccchhhhhhhccCCCcEEEEecCCCCc
Q 020932 205 MEKIMQDG---FIDVKNKT--G-DVEY-RVTEESL--------------MDRLNTNMHDACLQIDMECSVLTIHGSSDKI 263 (319)
Q Consensus 205 ~~~~~~~~---~~~~~~~~--~-~~~~-~~~~~~~--------------~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 263 (319)
...+.... ........ . .... ......+ .+.+.... ......++++|+++|+|++|++
T Consensus 190 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~-~~~~l~~i~~P~lii~g~~D~~ 268 (324)
T PRK10985 190 LNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCS-ALPLLNQIRKPTLIIHAKDDPF 268 (324)
T ss_pred HHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCC-hHHHHhCCCCCEEEEecCCCCC
Confidence 11111100 00000000 0 0000 0000000 11110000 0111236789999999999999
Q ss_pred cCcchHHHHHhhCCCCeEEEecCCCccCccc------HHHHHHHHHHHHHhhcC
Q 020932 264 IPLQDAHEFDKIIPNHKLHVVEGANHGYTNH------QAELVSVVLDFVKASLK 311 (319)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~------~~~~~~~i~~fl~~~~~ 311 (319)
++.+....+.+..++.++++++++||+.+.+ .....+.+.+|++..+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 269 MTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTTYLE 322 (324)
T ss_pred CChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHHhhc
Confidence 9988777777778889999999999995422 13567778899877653
No 40
>PRK07581 hypothetical protein; Validated
Probab=99.94 E-value=4.3e-26 Score=191.44 Aligned_cols=237 Identities=17% Similarity=0.128 Sum_probs=145.2
Q ss_pred CCceEEEEEEeC---CCceEEEEEccCCCCCCChhHHHHH---HHHHHcCceEEEEcCCCCCCCCCCCC---CCChH---
Q 020932 70 YGERLVGVLHDA---ESSEIVVLCHGFRSTKDDPSMVNLA---VALQNEGISAFRFDFAGNGESEGSFQ---YGNYW--- 137 (319)
Q Consensus 70 dg~~l~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~---~~l~~~G~~v~~~d~~G~G~s~~~~~---~~~~~--- 137 (319)
+|.++++...++ +..|+||++||++++.. .|..+. +.|...+|+|+++|+||||.|+.+.. ..+++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~--~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQ--DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcc--cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 466666655554 23466777777776653 243332 36665679999999999999975532 12222
Q ss_pred --HHHhHHHH----HHHHHHhCCCceE-EEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhh-----------
Q 020932 138 --READDLRA----VVQYFCGANRAVG-AILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIED----------- 198 (319)
Q Consensus 138 --~~~~d~~~----~i~~l~~~~~~~i-~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~----------- 198 (319)
..++|+.+ +++.+ +.+++ +|+||||||++|+.+|.++|+ |+++|++++..........
T Consensus 102 ~~~~~~~~~~~~~~l~~~l---gi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~ 178 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKF---GIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTA 178 (339)
T ss_pred ceeHHHHHHHHHHHHHHHh---CCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHh
Confidence 24566665 33444 88885 799999999999999999999 9999999875432110000
Q ss_pred ---------------hh---chHHH-----HHhhhcc-ccccc-----c----CCCcceeeeehhhHHhh---hc-----
Q 020932 199 ---------------RL---GKDYM-----EKIMQDG-FIDVK-----N----KTGDVEYRVTEESLMDR---LN----- 237 (319)
Q Consensus 199 ---------------~~---~~~~~-----~~~~~~~-~~~~~-----~----~~~~~~~~~~~~~~~~~---~~----- 237 (319)
.+ ...+. ..+.... +.... . ................. +.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 258 (339)
T PRK07581 179 DPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDIS 258 (339)
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccc
Confidence 00 00000 0000000 00000 0 00000000000001110 00
Q ss_pred cc----hhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecC-CCccC-cccHHHHHHHHHHHHHhhcC
Q 020932 238 TN----MHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEG-ANHGY-TNHQAELVSVVLDFVKASLK 311 (319)
Q Consensus 238 ~~----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~-~~~~~~~~~~i~~fl~~~~~ 311 (319)
.. ........++++|+|+|+|++|.++|++.++.+.+.+++++++++++ +||.. .++++++...|.+||++.+.
T Consensus 259 ~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 259 RNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred cCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 00 00111222579999999999999999999999999999999999998 89985 57889999999999998764
No 41
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.94 E-value=2.8e-25 Score=183.74 Aligned_cols=237 Identities=16% Similarity=0.133 Sum_probs=148.4
Q ss_pred EEeCCCCceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC--CCChHHHHhH
Q 020932 65 VIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ--YGNYWREADD 142 (319)
Q Consensus 65 ~~~~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~d 142 (319)
.+...||.++++...++.++++||++||++++... ..+...+...+|+|+++|+||||.|+.... ..+.++.++|
T Consensus 8 ~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 84 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTD---PGCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVAD 84 (306)
T ss_pred eEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCC---HHHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHH
Confidence 44555788888766554457789999998877632 234445555679999999999999986542 2355677888
Q ss_pred HHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchh-------hhhchHHHHHhh-----
Q 020932 143 LRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIE-------DRLGKDYMEKIM----- 209 (319)
Q Consensus 143 ~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~----- 209 (319)
+..+++.+ +.++++++||||||.+++.++.++|+ ++++|++++......... ..+.......+.
T Consensus 85 l~~l~~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (306)
T TIGR01249 85 IEKLREKL---GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSIPE 161 (306)
T ss_pred HHHHHHHc---CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhCCh
Confidence 88888877 67789999999999999999999998 999999987543211000 000000000000
Q ss_pred ------------hcccccc--------------cc----CCCcceeee--ehh--hHHhhh----------cc-chhhhh
Q 020932 210 ------------QDGFIDV--------------KN----KTGDVEYRV--TEE--SLMDRL----------NT-NMHDAC 244 (319)
Q Consensus 210 ------------~~~~~~~--------------~~----~~~~~~~~~--~~~--~~~~~~----------~~-~~~~~~ 244 (319)
...+... .. ......+.. ... .....+ .. ......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (306)
T TIGR01249 162 NERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFILD 241 (306)
T ss_pred hhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHHHH
Confidence 0000000 00 000000000 000 000000 00 000001
Q ss_pred hhccC-CCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCcccHHHHHHHHHHHHHhh
Q 020932 245 LQIDM-ECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVKAS 309 (319)
Q Consensus 245 ~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 309 (319)
...++ ++|+|+|+|++|.++|.+.++.+++.++++++++++++||...+ ++..+.|.+|+...
T Consensus 242 ~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 242 NISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSAFD--PNNLAALVHALETY 305 (306)
T ss_pred hhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCCCC--hHHHHHHHHHHHHh
Confidence 11234 58999999999999999999999999999999999999999753 44556777777654
No 42
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.94 E-value=8.3e-26 Score=181.22 Aligned_cols=212 Identities=20% Similarity=0.278 Sum_probs=136.7
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEE
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGH 163 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~ 163 (319)
+|+||++||++++. ..|..+++.|.+ +|+|+++|+||+|.|+... ..++++.++++.+. ..++++++||
T Consensus 4 ~~~iv~~HG~~~~~--~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~-------~~~~~~lvG~ 72 (245)
T TIGR01738 4 NVHLVLIHGWGMNA--EVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQ-------APDPAIWLGW 72 (245)
T ss_pred CceEEEEcCCCCch--hhHHHHHHhhcc-CeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHh-------CCCCeEEEEE
Confidence 37899999999988 568999999976 5999999999999987543 23444444443322 2357999999
Q ss_pred ehhHHHHHHHHhhcCC-ccEEEEEeccccccc--chhhhh----chHHHHHhhh------ccccc---cccCCCccee--
Q 020932 164 SKGGSVVLLYASKYND-IRTFVNVSGRYDLKG--GIEDRL----GKDYMEKIMQ------DGFID---VKNKTGDVEY-- 225 (319)
Q Consensus 164 S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--~~~~~~----~~~~~~~~~~------~~~~~---~~~~~~~~~~-- 225 (319)
||||.+++.++.++|+ ++++|++++...... ...... ...+...+.. ..+.. ..........
T Consensus 73 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (245)
T TIGR01738 73 SLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARA 152 (245)
T ss_pred cHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHH
Confidence 9999999999999999 999999987543211 010000 0000000000 00000 0000000000
Q ss_pred -------eeeh--hhHHhhhcc--chhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccC-cc
Q 020932 226 -------RVTE--ESLMDRLNT--NMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TN 293 (319)
Q Consensus 226 -------~~~~--~~~~~~~~~--~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~ 293 (319)
.... ..+...+.. .........++++|+++++|++|.++|.+..+.+.+.++++++++++++||++ .+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 232 (245)
T TIGR01738 153 LKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLS 232 (245)
T ss_pred HHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCcccc
Confidence 0000 000000000 00001112367999999999999999999999999999999999999999996 57
Q ss_pred cHHHHHHHHHHHH
Q 020932 294 HQAELVSVVLDFV 306 (319)
Q Consensus 294 ~~~~~~~~i~~fl 306 (319)
+++++++.|.+|+
T Consensus 233 ~p~~~~~~i~~fi 245 (245)
T TIGR01738 233 HAEAFCALLVAFK 245 (245)
T ss_pred CHHHHHHHHHhhC
Confidence 8899999999985
No 43
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=4.1e-26 Score=191.51 Aligned_cols=235 Identities=20% Similarity=0.212 Sum_probs=147.8
Q ss_pred CCCceEEEEEEeCCCceEEEEEccCCCCCCC----------hhHHHHHH---HHHHcCceEEEEcCCCCCCCCCCCCCCC
Q 020932 69 KYGERLVGVLHDAESSEIVVLCHGFRSTKDD----------PSMVNLAV---ALQNEGISAFRFDFAGNGESEGSFQYGN 135 (319)
Q Consensus 69 ~dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~----------~~~~~~~~---~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 135 (319)
.+|.++++...+++ ++++|++||++++... ..|..++. .|...+|+|+++|+||||.|... ..+
T Consensus 43 ~~~~~l~y~~~G~~-~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~--~~~ 119 (343)
T PRK08775 43 LEDLRLRYELIGPA-GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDV--PID 119 (343)
T ss_pred CCCceEEEEEeccC-CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCC--CCC
Confidence 35777776555433 3346666666665531 05777775 56444699999999999988532 345
Q ss_pred hHHHHhHHHHHHHHHHhCCCceE-EEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhc--h---------
Q 020932 136 YWREADDLRAVVQYFCGANRAVG-AILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLG--K--------- 202 (319)
Q Consensus 136 ~~~~~~d~~~~i~~l~~~~~~~i-~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~--~--------- 202 (319)
..++++|+.++++.+ +.+++ +++||||||++|+.+|.++|+ |+++|++++............. .
T Consensus 120 ~~~~a~dl~~ll~~l---~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (343)
T PRK08775 120 TADQADAIALLLDAL---GIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQ 196 (343)
T ss_pred HHHHHHHHHHHHHHc---CCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCC
Confidence 678899999999988 66554 799999999999999999998 9999999886432211000000 0
Q ss_pred -------HHHHHhhhcc------ccccccCCCcc---eeeeehh-hH-------Hhhhcc--------chh-hhhhhccC
Q 020932 203 -------DYMEKIMQDG------FIDVKNKTGDV---EYRVTEE-SL-------MDRLNT--------NMH-DACLQIDM 249 (319)
Q Consensus 203 -------~~~~~~~~~~------~~~~~~~~~~~---~~~~~~~-~~-------~~~~~~--------~~~-~~~~~~~~ 249 (319)
.......... +.......... ....... .+ ...... ... ......++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I 276 (343)
T PRK08775 197 CAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAI 276 (343)
T ss_pred CCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcC
Confidence 0000000000 00000000000 0000000 00 000000 000 00112367
Q ss_pred CCcEEEEecCCCCccCcchHHHHHhhC-CCCeEEEecC-CCccC-cccHHHHHHHHHHHHHhh
Q 020932 250 ECSVLTIHGSSDKIIPLQDAHEFDKII-PNHKLHVVEG-ANHGY-TNHQAELVSVVLDFVKAS 309 (319)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~-~gH~~-~~~~~~~~~~i~~fl~~~ 309 (319)
++|+|+|+|++|.++|++..+++.+.+ ++++++++++ +||.. .++++++++.|.+||++.
T Consensus 277 ~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 277 RVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred CCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 999999999999999999999998887 6899999985 99996 588899999999999865
No 44
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.94 E-value=1.3e-25 Score=180.57 Aligned_cols=217 Identities=21% Similarity=0.302 Sum_probs=140.5
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC--CCChHHHHhH-HHHHHHHHHhCCCceEEE
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ--YGNYWREADD-LRAVVQYFCGANRAVGAI 160 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~d-~~~~i~~l~~~~~~~i~l 160 (319)
+|+||++||++++. ..|..+++.|+ +||+|+++|+||+|.|+.+.. ..++.+.+++ +..+++.+ +.+++++
T Consensus 1 ~~~vv~~hG~~~~~--~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l 74 (251)
T TIGR03695 1 KPVLVFLHGFLGSG--ADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL---GIEPFFL 74 (251)
T ss_pred CCEEEEEcCCCCch--hhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc---CCCeEEE
Confidence 47899999999998 56899999998 789999999999999976542 3455566666 55555554 6678999
Q ss_pred EEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhh----hchHHHHHhhhccccccc---------cC---CCcc
Q 020932 161 LGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDR----LGKDYMEKIMQDGFIDVK---------NK---TGDV 223 (319)
Q Consensus 161 ~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---------~~---~~~~ 223 (319)
+|||+||.+++.+|.++|+ |++++++++........... ....+...+......... .. ....
T Consensus 75 ~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (251)
T TIGR03695 75 VGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPE 154 (251)
T ss_pred EEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChH
Confidence 9999999999999999998 99999998865433211100 000000111000000000 00 0000
Q ss_pred ee--------eeehhhHHhhhc-----cchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCcc
Q 020932 224 EY--------RVTEESLMDRLN-----TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHG 290 (319)
Q Consensus 224 ~~--------~~~~~~~~~~~~-----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (319)
.. ..........+. ..........++++|+++++|++|..++ +..+.+.+..+++++++++++||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~gH~ 233 (251)
T TIGR03695 155 QRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAGHN 233 (251)
T ss_pred HhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCCCC
Confidence 00 000000000000 0000001112568999999999998774 566778888899999999999999
Q ss_pred Cc-ccHHHHHHHHHHHHH
Q 020932 291 YT-NHQAELVSVVLDFVK 307 (319)
Q Consensus 291 ~~-~~~~~~~~~i~~fl~ 307 (319)
++ ++++++.+.|.+||+
T Consensus 234 ~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 234 IHLENPEAFAKILLAFLE 251 (251)
T ss_pred cCccChHHHHHHHHHHhC
Confidence 64 678899999999983
No 45
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.94 E-value=9.6e-25 Score=177.12 Aligned_cols=240 Identities=22% Similarity=0.302 Sum_probs=153.5
Q ss_pred EEEEEeCCCCceEEEEEEeCC--CceEEEEEccCCCCC--CChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChH
Q 020932 62 QELVIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTK--DDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYW 137 (319)
Q Consensus 62 ~~~~~~~~dg~~l~~~~~~~~--~~~~vv~~hG~~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~ 137 (319)
+.+.+... |.++.+++..|. ++++||++||+.... ....+..+++.|+++||.|+++|+||||.|.+.. .++.
T Consensus 3 ~~~~~~~~-~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--~~~~ 79 (274)
T TIGR03100 3 RALTFSCE-GETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--LGFE 79 (274)
T ss_pred eeEEEEcC-CcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC--CCHH
Confidence 45667654 778888887665 456788888765432 1134678899999999999999999999987643 3567
Q ss_pred HHHhHHHHHHHHHHhC--CCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhh-hhchHHHHHhhhcccc
Q 020932 138 READDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIED-RLGKDYMEKIMQDGFI 214 (319)
Q Consensus 138 ~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 214 (319)
.+.+|+.++++++.+. +.++++++|||+||.+++.+|...+.|+++|+++|+......... .....+........+.
T Consensus 80 ~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (274)
T TIGR03100 80 GIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSADFW 159 (274)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhChHHH
Confidence 7889999999999765 457899999999999999988765569999999987553321111 1111111111111000
Q ss_pred ccccCCCcceeeeehhhHHh----h-----------hccchhhhhhhccCCCcEEEEecCCCCccCcchH------HHHH
Q 020932 215 DVKNKTGDVEYRVTEESLMD----R-----------LNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDA------HEFD 273 (319)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~------~~~~ 273 (319)
... ..+...+......+.. . ...+... ....+++|+++++|+.|...+ +.. ..+.
T Consensus 160 ~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~ 235 (274)
T TIGR03100 160 RKL-LSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKA--GLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWR 235 (274)
T ss_pred HHh-cCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHH--HHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhH
Confidence 000 0000000000000000 0 0000111 112458999999999998864 221 4445
Q ss_pred hhC--CCCeEEEecCCCccCc-cc-HHHHHHHHHHHHHh
Q 020932 274 KII--PNHKLHVVEGANHGYT-NH-QAELVSVVLDFVKA 308 (319)
Q Consensus 274 ~~~--~~~~~~~~~~~gH~~~-~~-~~~~~~~i~~fl~~ 308 (319)
+.+ ++++++.+++++|++. ++ ++++.+.|.+||++
T Consensus 236 ~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 236 GALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 544 7899999999999974 33 47899999999963
No 46
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.94 E-value=1.5e-25 Score=191.08 Aligned_cols=229 Identities=21% Similarity=0.263 Sum_probs=149.6
Q ss_pred CceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHH
Q 020932 71 GERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYF 150 (319)
Q Consensus 71 g~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l 150 (319)
+..+.+...+++++++|||+||++++. ..|..+.+.|... |+|+++|+||||.|.......+++.+++++.++++.+
T Consensus 118 ~~~i~~~~~g~~~~~~vl~~HG~~~~~--~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~ 194 (371)
T PRK14875 118 GRTVRYLRLGEGDGTPVVLIHGFGGDL--NNWLFNHAALAAG-RPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDAL 194 (371)
T ss_pred CcEEEEecccCCCCCeEEEECCCCCcc--chHHHHHHHHhcC-CEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 566665544555678999999999998 4688888888775 9999999999999976655667788888888888776
Q ss_pred HhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchh---hhh----chHHHHHhhhccccccccCCCc
Q 020932 151 CGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIE---DRL----GKDYMEKIMQDGFIDVKNKTGD 222 (319)
Q Consensus 151 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~ 222 (319)
+..+++++|||+||.+++.+|..+|+ +.++|++++......... ..+ .......+....+.........
T Consensus 195 ---~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (371)
T PRK14875 195 ---GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQ 271 (371)
T ss_pred ---CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHH
Confidence 66789999999999999999999987 999999987532221100 000 0000000000000000000000
Q ss_pred c-----ee---eeehhh---HHhh-hcc---chhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCC
Q 020932 223 V-----EY---RVTEES---LMDR-LNT---NMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGA 287 (319)
Q Consensus 223 ~-----~~---~~~~~~---~~~~-~~~---~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (319)
. .+ ...... +... +.. .........++++|+++++|++|.++|.+.++.+. .++++.+++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l~---~~~~~~~~~~~ 348 (371)
T PRK14875 272 MVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGLP---DGVAVHVLPGA 348 (371)
T ss_pred HHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhcc---CCCeEEEeCCC
Confidence 0 00 000000 0000 000 00011112256899999999999999987765543 46899999999
Q ss_pred CccCc-ccHHHHHHHHHHHHHh
Q 020932 288 NHGYT-NHQAELVSVVLDFVKA 308 (319)
Q Consensus 288 gH~~~-~~~~~~~~~i~~fl~~ 308 (319)
||+++ ++++++.+.|.+||++
T Consensus 349 gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 349 GHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred CCChhhhCHHHHHHHHHHHhcc
Confidence 99964 7788999999999975
No 47
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=4.5e-24 Score=181.68 Aligned_cols=234 Identities=18% Similarity=0.131 Sum_probs=141.2
Q ss_pred eEEEEEEe-CCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCC-CChHH----HHhHHHHH
Q 020932 73 RLVGVLHD-AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY-GNYWR----EADDLRAV 146 (319)
Q Consensus 73 ~l~~~~~~-~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-~~~~~----~~~d~~~~ 146 (319)
.+....+. .+++|+||++||++++. ..|...+..|.++ |+|+++|+||+|.|+..... .+... .++++.++
T Consensus 93 ~~~~~~~~~~~~~p~vvllHG~~~~~--~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 169 (402)
T PLN02894 93 FINTVTFDSKEDAPTLVMVHGYGASQ--GFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEW 169 (402)
T ss_pred eEEEEEecCCCCCCEEEEECCCCcch--hHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHH
Confidence 44444443 33678999999999877 4577778888875 99999999999999765321 12121 23334444
Q ss_pred HHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccc--hhhhh---chHHH---------------
Q 020932 147 VQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG--IEDRL---GKDYM--------------- 205 (319)
Q Consensus 147 i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~--~~~~~---~~~~~--------------- 205 (319)
++ ..+.++++++||||||.+++.+|.++|+ ++++|++++....... ..... ...+.
T Consensus 170 ~~---~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 246 (402)
T PLN02894 170 RK---AKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQ 246 (402)
T ss_pred HH---HcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHH
Confidence 43 3377789999999999999999999998 9999999875422111 00000 00000
Q ss_pred --------------HHhhhccccccccC--CCcceeee-------------ehhhHHhhhcc-----chhhhhhhccCCC
Q 020932 206 --------------EKIMQDGFIDVKNK--TGDVEYRV-------------TEESLMDRLNT-----NMHDACLQIDMEC 251 (319)
Q Consensus 206 --------------~~~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~~~~~~-----~~~~~~~~~~~~~ 251 (319)
.......+...... ........ ........... .........++++
T Consensus 247 ~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~v 326 (402)
T PLN02894 247 KIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKV 326 (402)
T ss_pred HHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCC
Confidence 00000000000000 00000000 00000000000 0000111235689
Q ss_pred cEEEEecCCCCccCcchHHHHHhhCC-CCeEEEecCCCccC-cccHHHHHHHHHHHHHhhcCCC
Q 020932 252 SVLTIHGSSDKIIPLQDAHEFDKIIP-NHKLHVVEGANHGY-TNHQAELVSVVLDFVKASLKQD 313 (319)
Q Consensus 252 P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~-~~~~~~~~~~i~~fl~~~~~~~ 313 (319)
|+++|+|++|.+.+ .....+.+..+ .+++++++++||+. .++++++++.+.+|++..+...
T Consensus 327 P~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~ 389 (402)
T PLN02894 327 PTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPD 389 (402)
T ss_pred CEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCC
Confidence 99999999998765 55555555554 58999999999996 5778999999999999888664
No 48
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.94 E-value=3.1e-25 Score=186.77 Aligned_cols=235 Identities=16% Similarity=0.212 Sum_probs=150.7
Q ss_pred CCceEEEEEEeC---CCceEEEEEccCCCCCCCh---------hHHHHH---HHHHHcCceEEEEcCCC--CCCCCCCC-
Q 020932 70 YGERLVGVLHDA---ESSEIVVLCHGFRSTKDDP---------SMVNLA---VALQNEGISAFRFDFAG--NGESEGSF- 131 (319)
Q Consensus 70 dg~~l~~~~~~~---~~~~~vv~~hG~~~~~~~~---------~~~~~~---~~l~~~G~~v~~~d~~G--~G~s~~~~- 131 (319)
+|.++++..+++ +.+++||++||++++.... .|..++ ..|..++|.|+++|+|| ||.|....
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~ 93 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSI 93 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCC
Confidence 467788777764 3467999999999976321 366664 35656779999999999 56554210
Q ss_pred -----------CCCChHHHHhHHHHHHHHHHhCCCce-EEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccch--
Q 020932 132 -----------QYGNYWREADDLRAVVQYFCGANRAV-GAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI-- 196 (319)
Q Consensus 132 -----------~~~~~~~~~~d~~~~i~~l~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~-- 196 (319)
...+++++++|+.++++.+ +.++ ++++||||||.+++.+|.++|+ |+++|++++........
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 170 (351)
T TIGR01392 94 NPGGRPYGSDFPLITIRDDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA 170 (351)
T ss_pred CCCCCcCCCCCCCCcHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH
Confidence 1246788889999998887 7788 9999999999999999999998 99999999865432211
Q ss_pred -hhhhchH-----------------------HHHHhhh----------ccccccccCCCcce---e-eeehhhH------
Q 020932 197 -EDRLGKD-----------------------YMEKIMQ----------DGFIDVKNKTGDVE---Y-RVTEESL------ 232 (319)
Q Consensus 197 -~~~~~~~-----------------------~~~~~~~----------~~~~~~~~~~~~~~---~-~~~~~~~------ 232 (319)
....... ....+.. ..+........... . ......+
T Consensus 171 ~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
T TIGR01392 171 FNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGD 250 (351)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHH
Confidence 0000000 0000000 00000000000000 0 0000000
Q ss_pred --Hh------------hhcc-chh-----hhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEE-----EecCC
Q 020932 233 --MD------------RLNT-NMH-----DACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLH-----VVEGA 287 (319)
Q Consensus 233 --~~------------~~~~-~~~-----~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 287 (319)
.. .+.. +.. ......++++|+|+|+|++|.++|++.++.+.+.+++.+++ +++++
T Consensus 251 ~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~ 330 (351)
T TIGR01392 251 KFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPY 330 (351)
T ss_pred HHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCC
Confidence 00 0000 000 01122357899999999999999999999999999988765 56789
Q ss_pred CccC-cccHHHHHHHHHHHHH
Q 020932 288 NHGY-TNHQAELVSVVLDFVK 307 (319)
Q Consensus 288 gH~~-~~~~~~~~~~i~~fl~ 307 (319)
||.. .++++++.+.|.+||+
T Consensus 331 GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 331 GHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CcchhhcCHHHHHHHHHHHhC
Confidence 9996 5788999999999984
No 49
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=2.1e-24 Score=163.95 Aligned_cols=216 Identities=18% Similarity=0.214 Sum_probs=165.4
Q ss_pred ceEEEEEeCCCCceEEEEEEeCC--CceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCCCCCCh
Q 020932 60 KQQELVIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQYGNY 136 (319)
Q Consensus 60 ~~~~~~~~~~dg~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~ 136 (319)
..+-+.+++..|..+...++.+. ..++++++||...+.. ....+...|..+ +++++.+|++|+|.|.+.+...
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~~~~~lly~hGNa~Dlg--q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~-- 109 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEAAHPTLLYSHGNAADLG--QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER-- 109 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccccceEEEEcCCcccchH--HHHHHHHHHhhcccceEEEEecccccccCCCcccc--
Confidence 45566677777888888777665 3589999999976663 345555555552 6999999999999999988664
Q ss_pred HHHHhHHHHHHHHHHhCC--CceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhcccc
Q 020932 137 WREADDLRAVVQYFCGAN--RAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFI 214 (319)
Q Consensus 137 ~~~~~d~~~~i~~l~~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (319)
...+|+.++.++|++.. .++|+|+|+|+|+..++.+|.+.| ++++|+.+|..+..+.+....
T Consensus 110 -n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~-~~alVL~SPf~S~~rv~~~~~-------------- 173 (258)
T KOG1552|consen 110 -NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP-LAAVVLHSPFTSGMRVAFPDT-------------- 173 (258)
T ss_pred -cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC-cceEEEeccchhhhhhhccCc--------------
Confidence 44899999999999884 579999999999999999999999 999999999765433322110
Q ss_pred ccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCC-eEEEecCCCccCcc
Q 020932 215 DVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNH-KLHVVEGANHGYTN 293 (319)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ 293 (319)
...+....... ...-..++||+|++||++|.+++.....++++.+++. +..++.|+||...+
T Consensus 174 -------~~~~~~d~f~~----------i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~ 236 (258)
T KOG1552|consen 174 -------KTTYCFDAFPN----------IEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIE 236 (258)
T ss_pred -------ceEEeeccccc----------cCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccc
Confidence 00010000000 1111256999999999999999999999999999875 88999999999888
Q ss_pred cHHHHHHHHHHHHHhhcCC
Q 020932 294 HQAELVSVVLDFVKASLKQ 312 (319)
Q Consensus 294 ~~~~~~~~i~~fl~~~~~~ 312 (319)
..+++.+.+..|+......
T Consensus 237 ~~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 237 LYPEYIEHLRRFISSVLPS 255 (258)
T ss_pred cCHHHHHHHHHHHHHhccc
Confidence 8889999999999876543
No 50
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=1.8e-24 Score=183.51 Aligned_cols=238 Identities=14% Similarity=0.174 Sum_probs=150.7
Q ss_pred CceEEEEEEeC---CCceEEEEEccCCCCCCCh-----------hHHHHHH---HHHHcCceEEEEcCCCC-CCCCCCC-
Q 020932 71 GERLVGVLHDA---ESSEIVVLCHGFRSTKDDP-----------SMVNLAV---ALQNEGISAFRFDFAGN-GESEGSF- 131 (319)
Q Consensus 71 g~~l~~~~~~~---~~~~~vv~~hG~~~~~~~~-----------~~~~~~~---~l~~~G~~v~~~d~~G~-G~s~~~~- 131 (319)
|.+++|..++. +.+|+||++||++++...+ .|..++. .|...+|+|+++|++|+ |.|+++.
T Consensus 32 ~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~ 111 (379)
T PRK00175 32 PVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSS 111 (379)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCC
Confidence 45566655553 2368999999999988421 2666652 44345799999999983 4443221
Q ss_pred -------------CCCChHHHHhHHHHHHHHHHhCCCce-EEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccc-
Q 020932 132 -------------QYGNYWREADDLRAVVQYFCGANRAV-GAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGG- 195 (319)
Q Consensus 132 -------------~~~~~~~~~~d~~~~i~~l~~~~~~~-i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~- 195 (319)
...+++++++++.++++.+ +.++ ++++||||||.+++.+|.++|+ |+++|++++.......
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 188 (379)
T PRK00175 112 INPDTGKPYGSDFPVITIRDWVRAQARLLDAL---GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQN 188 (379)
T ss_pred CCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHH
Confidence 1357888999999999988 7778 4899999999999999999999 9999999876543211
Q ss_pred --hhhhhchHH-----------------------HHHh----h-------hccccccccCCCc---ceeeeehhhH----
Q 020932 196 --IEDRLGKDY-----------------------MEKI----M-------QDGFIDVKNKTGD---VEYRVTEESL---- 232 (319)
Q Consensus 196 --~~~~~~~~~-----------------------~~~~----~-------~~~~~~~~~~~~~---~~~~~~~~~~---- 232 (319)
+........ .... . ...+......... .........+
T Consensus 189 ~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 268 (379)
T PRK00175 189 IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQ 268 (379)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHH
Confidence 000000000 0000 0 0000000000000 0000000000
Q ss_pred ----Hhhhcc-------------ch------hhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCC----eEEEec
Q 020932 233 ----MDRLNT-------------NM------HDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNH----KLHVVE 285 (319)
Q Consensus 233 ----~~~~~~-------------~~------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~----~~~~~~ 285 (319)
...... +. .......++++|+|+|+|++|.++|++.++.+.+.++++ ++++++
T Consensus 269 ~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~ 348 (379)
T PRK00175 269 GDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEID 348 (379)
T ss_pred HHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 000000 00 011122367999999999999999999999999999886 777775
Q ss_pred -CCCccC-cccHHHHHHHHHHHHHhhcC
Q 020932 286 -GANHGY-TNHQAELVSVVLDFVKASLK 311 (319)
Q Consensus 286 -~~gH~~-~~~~~~~~~~i~~fl~~~~~ 311 (319)
++||.. +++++++++.|.+||++...
T Consensus 349 ~~~GH~~~le~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 349 SPYGHDAFLLDDPRYGRLVRAFLERAAR 376 (379)
T ss_pred CCCCchhHhcCHHHHHHHHHHHHHhhhh
Confidence 899996 57889999999999988543
No 51
>PRK10566 esterase; Provisional
Probab=99.92 E-value=1.7e-23 Score=168.34 Aligned_cols=206 Identities=17% Similarity=0.200 Sum_probs=133.0
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCCh-------HHHHhHHHHHHHHHHhC--
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNY-------WREADDLRAVVQYFCGA-- 153 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~-------~~~~~d~~~~i~~l~~~-- 153 (319)
+.|+||++||++++.. .|..+++.|+++||.|+++|+||+|.+........+ ....+|+.++++++.++
T Consensus 26 ~~p~vv~~HG~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 26 PLPTVFFYHGFTSSKL--VYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCEEEEeCCCCcccc--hHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4689999999998874 578899999999999999999999976432211111 13356777788887765
Q ss_pred -CCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhH
Q 020932 154 -NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESL 232 (319)
Q Consensus 154 -~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (319)
+.++++++|||+||.+++.++.++|++.+.+.+.+..... . +.... +......... ... .....
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~----~~~~~~~~~~-~~~-~~~~~ 168 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFT-S--------LARTL----FPPLIPETAA-QQA-EFNNI 168 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHH-H--------HHHHh----cccccccccc-cHH-HHHHH
Confidence 4578999999999999999999988866555443321110 0 00000 0000000000 000 00000
Q ss_pred Hhhhc-cchhhhhhhccC-CCcEEEEecCCCCccCcchHHHHHhhCCC------CeEEEecCCCccCcccHHHHHHHHHH
Q 020932 233 MDRLN-TNMHDACLQIDM-ECSVLTIHGSSDKIIPLQDAHEFDKIIPN------HKLHVVEGANHGYTNHQAELVSVVLD 304 (319)
Q Consensus 233 ~~~~~-~~~~~~~~~~~~-~~P~l~i~g~~D~~~~~~~~~~~~~~~~~------~~~~~~~~~gH~~~~~~~~~~~~i~~ 304 (319)
...+. .+... ...++ ++|+|+++|++|.++|++.++++.+.++. +++++++++||.+. .+..+.+.+
T Consensus 169 ~~~~~~~~~~~--~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~~~~~~~~ 243 (249)
T PRK10566 169 VAPLAEWEVTH--QLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PEALDAGVA 243 (249)
T ss_pred HHHHhhcChhh--hhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HHHHHHHHH
Confidence 00110 01100 11133 68999999999999999999998887642 46778999999964 456889999
Q ss_pred HHHhhc
Q 020932 305 FVKASL 310 (319)
Q Consensus 305 fl~~~~ 310 (319)
||++++
T Consensus 244 fl~~~~ 249 (249)
T PRK10566 244 FFRQHL 249 (249)
T ss_pred HHHhhC
Confidence 998754
No 52
>PLN02872 triacylglycerol lipase
Probab=99.92 E-value=1.1e-23 Score=177.13 Aligned_cols=254 Identities=16% Similarity=0.139 Sum_probs=162.5
Q ss_pred cccceEEEEEeCCCCceEEEEEEeCC-------CceEEEEEccCCCCCCChhH----HHHHHHHHHcCceEEEEcCCCCC
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDAE-------SSEIVVLCHGFRSTKDDPSM----VNLAVALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~~-------~~~~vv~~hG~~~~~~~~~~----~~~~~~l~~~G~~v~~~d~~G~G 125 (319)
.+++.|+..+++.||..|.....+++ ++|+|+++||++++++.|.. ..++..|+++||+|+++|+||++
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~ 119 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTR 119 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccc
Confidence 57899999999999999998776432 36799999999988854221 35677899999999999999987
Q ss_pred CCCCCC-------C--CCChHHHH-hHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC----ccEEEEEecccc
Q 020932 126 ESEGSF-------Q--YGNYWREA-DDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND----IRTFVNVSGRYD 191 (319)
Q Consensus 126 ~s~~~~-------~--~~~~~~~~-~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~ 191 (319)
.|.+.. . ..++++++ .|+.++++++.+...++++++|||+||.+++.++ .+|+ |+++++++|...
T Consensus 120 ~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~ 198 (395)
T PLN02872 120 WSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISY 198 (395)
T ss_pred cccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhh
Confidence 653211 1 23566666 7999999999766557899999999999998655 5565 788888887643
Q ss_pred ccc---chhhhhch-------------------HHHHHhhhcc----------ccccccCCCccee------------ee
Q 020932 192 LKG---GIEDRLGK-------------------DYMEKIMQDG----------FIDVKNKTGDVEY------------RV 227 (319)
Q Consensus 192 ~~~---~~~~~~~~-------------------~~~~~~~~~~----------~~~~~~~~~~~~~------------~~ 227 (319)
... .+...+.. .....+.... +..+......... ..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pagt 278 (395)
T PLN02872 199 LDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPHPS 278 (395)
T ss_pred hccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCCcc
Confidence 221 11100000 0000000000 0000000000000 00
Q ss_pred ehhhHH-----------hhhccc-----------hhhhhhhccC--CCcEEEEecCCCCccCcchHHHHHhhCCC-CeEE
Q 020932 228 TEESLM-----------DRLNTN-----------MHDACLQIDM--ECSVLTIHGSSDKIIPLQDAHEFDKIIPN-HKLH 282 (319)
Q Consensus 228 ~~~~~~-----------~~~~~~-----------~~~~~~~~~~--~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~ 282 (319)
....+. ..+... ........++ ++|+++++|++|.+++++.++.+.+.+++ .+++
T Consensus 279 S~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~ 358 (395)
T PLN02872 279 SVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELL 358 (395)
T ss_pred hHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEE
Confidence 000000 000000 0000011133 68999999999999999999999999887 6888
Q ss_pred EecCCCcc---Cc-ccHHHHHHHHHHHHHhhcC
Q 020932 283 VVEGANHG---YT-NHQAELVSVVLDFVKASLK 311 (319)
Q Consensus 283 ~~~~~gH~---~~-~~~~~~~~~i~~fl~~~~~ 311 (319)
.+++++|. +. +.++++.+.|.+||++...
T Consensus 359 ~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 359 YLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred EcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 99999996 22 5578899999999997654
No 53
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.92 E-value=3.3e-23 Score=201.64 Aligned_cols=251 Identities=17% Similarity=0.197 Sum_probs=159.3
Q ss_pred cccceEEEEEeCCCCceEEEEEEeCC---CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC--
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-- 131 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-- 131 (319)
.++....+.+.. +|......+...+ ++++|||+||++++. ..|..+.+.|.+. |+|+++|+||||.|....
T Consensus 1342 ~~l~~~~~~v~~-~~~~~~i~~~~~G~~~~~~~vVllHG~~~s~--~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~ 1417 (1655)
T PLN02980 1342 EQVRTYELRVDV-DGFSCLIKVHEVGQNAEGSVVLFLHGFLGTG--EDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHA 1417 (1655)
T ss_pred CCCceEEEEEcc-CceEEEEEEEecCCCCCCCeEEEECCCCCCH--HHHHHHHHHHhCC-CEEEEEcCCCCCCCCCcccc
Confidence 445555555553 3433333333333 368999999999999 5689999999765 999999999999987532
Q ss_pred ------CCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhc---
Q 020932 132 ------QYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLG--- 201 (319)
Q Consensus 132 ------~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~--- 201 (319)
...+++..++++.++++.+ +.++++++||||||.+++.++.++|+ |+++|++++.............
T Consensus 1418 ~~~~~~~~~si~~~a~~l~~ll~~l---~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~ 1494 (1655)
T PLN02980 1418 KETQTEPTLSVELVADLLYKLIEHI---TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAK 1494 (1655)
T ss_pred ccccccccCCHHHHHHHHHHHHHHh---CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhh
Confidence 1345677788888888877 67789999999999999999999998 9999999875433211111000
Q ss_pred -hHHHHH--------hhhcccccc----ccCCCcc-------eeeeehhhHHhhhc-----cchhhhhhhccCCCcEEEE
Q 020932 202 -KDYMEK--------IMQDGFIDV----KNKTGDV-------EYRVTEESLMDRLN-----TNMHDACLQIDMECSVLTI 256 (319)
Q Consensus 202 -~~~~~~--------~~~~~~~~~----~~~~~~~-------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~P~l~i 256 (319)
...... +....+... ....... ............+. ..........++++|+|+|
T Consensus 1495 ~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI 1574 (1655)
T PLN02980 1495 DDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLV 1574 (1655)
T ss_pred hhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEE
Confidence 000000 000000000 0000000 00000000010000 0000111123678999999
Q ss_pred ecCCCCccCcchHHHHHhhCCC------------CeEEEecCCCccCc-ccHHHHHHHHHHHHHhhcCCCCC
Q 020932 257 HGSSDKIIPLQDAHEFDKIIPN------------HKLHVVEGANHGYT-NHQAELVSVVLDFVKASLKQDHP 315 (319)
Q Consensus 257 ~g~~D~~~~~~~~~~~~~~~~~------------~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~~~~~~ 315 (319)
+|++|..++ +.++++.+.+++ +++++++++||.++ ++++++++.|.+||++.-....+
T Consensus 1575 ~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~~~~~~ 1645 (1655)
T PLN02980 1575 VGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRLHNSSTP 1645 (1655)
T ss_pred EECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhccccCCC
Confidence 999999875 566777776665 48999999999974 77899999999999987665544
No 54
>PRK05855 short chain dehydrogenase; Validated
Probab=99.91 E-value=2.8e-23 Score=187.45 Aligned_cols=235 Identities=18% Similarity=0.174 Sum_probs=149.8
Q ss_pred CCCCceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC--CCCChHHHHhHHHH
Q 020932 68 NKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF--QYGNYWREADDLRA 145 (319)
Q Consensus 68 ~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~~ 145 (319)
..||.+++++.+++.++|+|||+||++++. ..|..+.+.| ..||+|+++|+||||.|+... ...+++.+++|+..
T Consensus 9 ~~~g~~l~~~~~g~~~~~~ivllHG~~~~~--~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~ 85 (582)
T PRK05855 9 SSDGVRLAVYEWGDPDRPTVVLVHGYPDNH--EVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAA 85 (582)
T ss_pred eeCCEEEEEEEcCCCCCCeEEEEcCCCchH--HHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHH
Confidence 357888988777766788999999999988 6799999999 557999999999999998644 34578899999999
Q ss_pred HHHHHHhCCCc-eEEEEEEehhHHHHHHHHhhc--CC-ccEEEEEecccccc-cc-hhhhh---ch----HHHHHhhhcc
Q 020932 146 VVQYFCGANRA-VGAILGHSKGGSVVLLYASKY--ND-IRTFVNVSGRYDLK-GG-IEDRL---GK----DYMEKIMQDG 212 (319)
Q Consensus 146 ~i~~l~~~~~~-~i~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~~~-~~-~~~~~---~~----~~~~~~~~~~ 212 (319)
+++.+ +.. +++|+||||||.+++.++... ++ +..++.++++.... .. ..... .. ..........
T Consensus 86 ~i~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (582)
T PRK05855 86 VIDAV---SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSW 162 (582)
T ss_pred HHHHh---CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhH
Confidence 99987 444 499999999999998887763 22 44444444322100 00 00000 00 0000000000
Q ss_pred ----------------------ccccccCCCcc-eeee-----------ehhhHHhhhccchhhhhhhccCCCcEEEEec
Q 020932 213 ----------------------FIDVKNKTGDV-EYRV-----------TEESLMDRLNTNMHDACLQIDMECSVLTIHG 258 (319)
Q Consensus 213 ----------------------~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 258 (319)
........... .... ....+...... .........+++|+++|+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~lii~G 241 (582)
T PRK05855 163 YIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIR-SLSRPRERYTDVPVQLIVP 241 (582)
T ss_pred HHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhh-hhccCccCCccCceEEEEe
Confidence 00000000000 0000 00000000000 0000011236899999999
Q ss_pred CCCCccCcchHHHHHhhCCCCeEEEecCCCccCc-ccHHHHHHHHHHHHHhhc
Q 020932 259 SSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVKASL 310 (319)
Q Consensus 259 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 310 (319)
++|.++|.+..+.+.+..++.++++++ +||+.+ ++++++.+.|.+|+++..
T Consensus 242 ~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 242 TGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred CCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHhcc
Confidence 999999999998888888888888887 689964 778899999999998753
No 55
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.91 E-value=5e-24 Score=154.36 Aligned_cols=240 Identities=15% Similarity=0.150 Sum_probs=164.5
Q ss_pred ccceEEEEEeCCCCceEEEEEEeCCCceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCCCCCCh
Q 020932 58 AVKQQELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQYGNY 136 (319)
Q Consensus 58 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~ 136 (319)
.+....+.+. |.++.+.-++.|+. .|++++|.-++... .|.+....|.+. -++++++|.||+|.|.++......
T Consensus 20 ~~te~kv~vn---g~ql~y~~~G~G~~-~iLlipGalGs~~t-Df~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~ 94 (277)
T KOG2984|consen 20 DYTESKVHVN---GTQLGYCKYGHGPN-YILLIPGALGSYKT-DFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEV 94 (277)
T ss_pred hhhhheeeec---CceeeeeecCCCCc-eeEecccccccccc-cCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchH
Confidence 3455555663 88888665555443 68888998877753 466655555443 389999999999999988877666
Q ss_pred HHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchh-hhhchHHHHHhhhcccc
Q 020932 137 WREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIE-DRLGKDYMEKIMQDGFI 214 (319)
Q Consensus 137 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 214 (319)
+...+|...+++.++..+.+++.++|+|-||..|+..|+++++ |..+|+.++.......-. ..-+..-...+...+..
T Consensus 95 ~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~ 174 (277)
T KOG2984|consen 95 QFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQ 174 (277)
T ss_pred HHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcc
Confidence 7777888888877777789999999999999999999999999 999999987654332111 00011111111111111
Q ss_pred ccccCCCcceeeeehhhHHhhhc-------------cchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeE
Q 020932 215 DVKNKTGDVEYRVTEESLMDRLN-------------TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKL 281 (319)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~ 281 (319)
+... ....+.+...+. ....-.....+++||+|+++|++|++++..++--+....+.+++
T Consensus 175 P~e~-------~Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~ 247 (277)
T KOG2984|consen 175 PYED-------HYGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKV 247 (277)
T ss_pred hHHH-------hcCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceE
Confidence 1111 011111111110 01111112236799999999999999999988888888899999
Q ss_pred EEecCCCccCc-ccHHHHHHHHHHHHHhh
Q 020932 282 HVVEGANHGYT-NHQAELVSVVLDFVKAS 309 (319)
Q Consensus 282 ~~~~~~gH~~~-~~~~~~~~~i~~fl~~~ 309 (319)
.++|.++|.++ -.++++++.+.+||++.
T Consensus 248 ~~~peGkHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 248 EIHPEGKHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred EEccCCCcceeeechHHHHHHHHHHHhcc
Confidence 99999999986 56799999999999864
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.91 E-value=4.5e-23 Score=157.34 Aligned_cols=186 Identities=15% Similarity=0.179 Sum_probs=126.6
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEE
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILG 162 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G 162 (319)
|+||++||++++..++....+.+.|.+. +|+|+++|+||++ ++.++++.++++.+ +.++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-----------~~~~~~l~~l~~~~---~~~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-----------ADAAELLESLVLEH---GGDPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-----------HHHHHHHHHHHHHc---CCCCeEEEE
Confidence 6899999999999642222456667653 6999999999984 34566677777655 677899999
Q ss_pred EehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhh
Q 020932 163 HSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHD 242 (319)
Q Consensus 163 ~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (319)
|||||.+++.+|.++|. .+|+++|.......+. ....... .......+......+.+....+...
T Consensus 68 ~S~Gg~~a~~~a~~~~~--~~vl~~~~~~~~~~~~---------~~~~~~~----~~~~~~~~~~~~~~~~d~~~~~~~~ 132 (190)
T PRK11071 68 SSLGGYYATWLSQCFML--PAVVVNPAVRPFELLT---------DYLGENE----NPYTGQQYVLESRHIYDLKVMQIDP 132 (190)
T ss_pred ECHHHHHHHHHHHHcCC--CEEEECCCCCHHHHHH---------HhcCCcc----cccCCCcEEEcHHHHHHHHhcCCcc
Confidence 99999999999999883 4688888655221111 1111100 0001111333333333332222111
Q ss_pred hhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCcccHHHHHHHHHHHHH
Q 020932 243 ACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVK 307 (319)
Q Consensus 243 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 307 (319)
.+..+|+++++|++|+++|++.+.++++. ++.++++|++|.+. +.+++.+.+.+|+.
T Consensus 133 ----i~~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f~-~~~~~~~~i~~fl~ 189 (190)
T PRK11071 133 ----LESPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAFV-GFERYFNQIVDFLG 189 (190)
T ss_pred ----CCChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcchh-hHHHhHHHHHHHhc
Confidence 23578899999999999999999999884 46778899999984 33888999999975
No 57
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.91 E-value=4.6e-23 Score=184.46 Aligned_cols=240 Identities=21% Similarity=0.264 Sum_probs=166.6
Q ss_pred cccceEEEEEeCCCCceEEEEEEeCC---C---ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDAE---S---SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS 130 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~~---~---~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 130 (319)
.....|.+++++.||.++.++++.|. + -|+||++||.......+.+....+.|+.+||.|+.+|+||.+.-...
T Consensus 361 ~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~ 440 (620)
T COG1506 361 KLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGRE 440 (620)
T ss_pred ccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHH
Confidence 44578999999999999999998774 1 27999999998666545677888999999999999999976542211
Q ss_pred C----CCCChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchH
Q 020932 131 F----QYGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKD 203 (319)
Q Consensus 131 ~----~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~ 203 (319)
. .........+|+.+.++++.+. +.++++++|||+||++++.++.+.+.+++.+...+..+..........
T Consensus 441 F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~-- 518 (620)
T COG1506 441 FADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTE-- 518 (620)
T ss_pred HHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccch--
Confidence 1 0011134478888999988776 556899999999999999999998888888877775543222111000
Q ss_pred HHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC----CC
Q 020932 204 YMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NH 279 (319)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~ 279 (319)
.+...........+. ..+.+.. ........++++|+|+|||++|..||.+++..+.+.+. ++
T Consensus 519 --------~~~~~~~~~~~~~~~-~~~~~~~-----~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~ 584 (620)
T COG1506 519 --------GLRFDPEENGGGPPE-DREKYED-----RSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPV 584 (620)
T ss_pred --------hhcCCHHHhCCCccc-ChHHHHh-----cChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceE
Confidence 000000000000000 0011111 01111122669999999999999999999998887764 57
Q ss_pred eEEEecCCCccCc--ccHHHHHHHHHHHHHhhcCC
Q 020932 280 KLHVVEGANHGYT--NHQAELVSVVLDFVKASLKQ 312 (319)
Q Consensus 280 ~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~~~~~ 312 (319)
+++++|+.+|.+. ++...+.+.+.+|++++++.
T Consensus 585 ~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 585 ELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred EEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 9999999999975 44577899999999998764
No 58
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.90 E-value=2.7e-22 Score=144.69 Aligned_cols=195 Identities=23% Similarity=0.393 Sum_probs=152.9
Q ss_pred eEEEEEeCCCCceEEEEEEeCC--CceEEEEEccC---CCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCC
Q 020932 61 QQELVIPNKYGERLVGVLHDAE--SSEIVVLCHGF---RSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGN 135 (319)
Q Consensus 61 ~~~~~~~~~dg~~l~~~~~~~~--~~~~vv~~hG~---~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 135 (319)
..++.+....| .+.+.+..++ ..|+.|++|.- +++..+.....++..|.++||.++.+|+||.|.|.+..+..
T Consensus 4 ~~~v~i~Gp~G-~le~~~~~~~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~G- 81 (210)
T COG2945 4 MPTVIINGPAG-RLEGRYEPAKTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNG- 81 (210)
T ss_pred CCcEEecCCcc-cceeccCCCCCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCC-
Confidence 34455654444 4555555443 56788888874 56666567788999999999999999999999999987654
Q ss_pred hHHHHhHHHHHHHHHHhCCCc-e-EEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhccc
Q 020932 136 YWREADDLRAVVQYFCGANRA-V-GAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGF 213 (319)
Q Consensus 136 ~~~~~~d~~~~i~~l~~~~~~-~-i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (319)
..+.+|..++++|++.+.++ + ..+.|+|+|+++++.+|.+.|+....+.+.|..+..+..
T Consensus 82 -iGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~dfs----------------- 143 (210)
T COG2945 82 -IGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYDFS----------------- 143 (210)
T ss_pred -cchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchhhh-----------------
Confidence 45589999999999998433 3 368999999999999999999988888887755411000
Q ss_pred cccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCcc
Q 020932 214 IDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTN 293 (319)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 293 (319)
......+|.++|+|+.|.+++++...++++. ...+++++++++|+++.
T Consensus 144 -------------------------------~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~g 191 (210)
T COG2945 144 -------------------------------FLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFHG 191 (210)
T ss_pred -------------------------------hccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceecc
Confidence 0002367999999999999999998888887 56789999999999999
Q ss_pred cHHHHHHHHHHHHH
Q 020932 294 HQAELVSVVLDFVK 307 (319)
Q Consensus 294 ~~~~~~~~i~~fl~ 307 (319)
.-..+.+.|.+|+.
T Consensus 192 Kl~~l~~~i~~~l~ 205 (210)
T COG2945 192 KLIELRDTIADFLE 205 (210)
T ss_pred cHHHHHHHHHHHhh
Confidence 88999999999995
No 59
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.90 E-value=4.7e-22 Score=156.34 Aligned_cols=252 Identities=19% Similarity=0.241 Sum_probs=159.3
Q ss_pred ceEEEEEeCCCCceEEEEEEe-CC--CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCCh
Q 020932 60 KQQELVIPNKYGERLVGVLHD-AE--SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNY 136 (319)
Q Consensus 60 ~~~~~~~~~~dg~~l~~~~~~-~~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~ 136 (319)
..++..+.++||-.+...+.. +. .+|.||++||+.+++.+.+.+.+.+.+.++||.|++++.|||+.+........-
T Consensus 48 ~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 48 AYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred ccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec
Confidence 334445555667656554544 32 578999999999999877889999999999999999999999988764433333
Q ss_pred HHHHhHHHHHHHHHHhC-CCceEEEEEEehhHH-HHHHHHhhcCC--ccEEEEEecccccccchh--------hhhchHH
Q 020932 137 WREADDLRAVVQYFCGA-NRAVGAILGHSKGGS-VVLLYASKYND--IRTFVNVSGRYDLKGGIE--------DRLGKDY 204 (319)
Q Consensus 137 ~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~-~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~--------~~~~~~~ 204 (319)
..+.+|+..++++++.. ...++..+|+|+||. ++..++.+..+ +.+.+.++.++++..... ......+
T Consensus 128 ~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l 207 (345)
T COG0429 128 SGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYL 207 (345)
T ss_pred ccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHH
Confidence 55569999999999886 677899999999995 55554444444 888888887776532211 1111111
Q ss_pred HHHhhh---cccccccc-CCCccee----eeehhhHHhhhcc---------chhhhh----hhccCCCcEEEEecCCCCc
Q 020932 205 MEKIMQ---DGFIDVKN-KTGDVEY----RVTEESLMDRLNT---------NMHDAC----LQIDMECSVLTIHGSSDKI 263 (319)
Q Consensus 205 ~~~~~~---~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~---------~~~~~~----~~~~~~~P~l~i~g~~D~~ 263 (319)
...+.+ ........ ....... ..+..++.+.+.. +..... ...+|.+|+|+|++.+|++
T Consensus 208 ~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~ 287 (345)
T COG0429 208 LRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPF 287 (345)
T ss_pred HHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCC
Confidence 111111 11111100 0000000 0000111111100 111111 1126799999999999999
Q ss_pred cCcchHHHHHh-hCCCCeEEEecCCCcc-Ccc----cHH-HHHHHHHHHHHhhcC
Q 020932 264 IPLQDAHEFDK-IIPNHKLHVVEGANHG-YTN----HQA-ELVSVVLDFVKASLK 311 (319)
Q Consensus 264 ~~~~~~~~~~~-~~~~~~~~~~~~~gH~-~~~----~~~-~~~~~i~~fl~~~~~ 311 (319)
++++..-+... ..|++.+.+-+.+||. +.. ++. ...+.+.+||+..+.
T Consensus 288 ~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 288 MPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred CChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 99877666555 6788999999999999 333 222 567889999987654
No 60
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.90 E-value=7.8e-22 Score=155.61 Aligned_cols=225 Identities=20% Similarity=0.320 Sum_probs=160.5
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGA 159 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~ 159 (319)
...|+++++||+.++..+ |..+...|+.. |-.|+++|.|.||.|...... ++..+++|+..+|+..... ...++.
T Consensus 50 ~~~Pp~i~lHGl~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h-~~~~ma~dv~~Fi~~v~~~~~~~~~~ 126 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVH-NYEAMAEDVKLFIDGVGGSTRLDPVV 126 (315)
T ss_pred CCCCceEEecccccCCCC--HHHHHHHhcccccCceEEEecccCCCCcccccc-CHHHHHHHHHHHHHHcccccccCCce
Confidence 378999999999999965 99999999776 778999999999999876644 4789999999999988643 356799
Q ss_pred EEEEehhH-HHHHHHHhhcCC-ccEEEEEeccc-ccccchhh-------------h----hch-H------------HHH
Q 020932 160 ILGHSKGG-SVVLLYASKYND-IRTFVNVSGRY-DLKGGIED-------------R----LGK-D------------YME 206 (319)
Q Consensus 160 l~G~S~Gg-~~a~~~a~~~p~-v~~~v~~~~~~-~~~~~~~~-------------~----~~~-~------------~~~ 206 (319)
++|||||| .+++..+...|+ +..+|++.-.. .......+ . -+. . ...
T Consensus 127 l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~ 206 (315)
T KOG2382|consen 127 LLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVR 206 (315)
T ss_pred ecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHH
Confidence 99999999 777777778888 77777765332 11110000 0 000 0 111
Q ss_pred HhhhccccccccCCCcceeeeehhhHHhhhcc--ch--hhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEE
Q 020932 207 KIMQDGFIDVKNKTGDVEYRVTEESLMDRLNT--NM--HDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLH 282 (319)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 282 (319)
.+....+.. ........|......+.+.+.. .. ...........|++++.|.++..++.+.-..+.+.+|+++++
T Consensus 207 ~fi~~nl~~-~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~ 285 (315)
T KOG2382|consen 207 QFILTNLKK-SPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVH 285 (315)
T ss_pred HHHHHhcCc-CCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccchhee
Confidence 111112221 2233455555555555544433 11 111111345889999999999999999999999999999999
Q ss_pred EecCCCccCc-ccHHHHHHHHHHHHHhhc
Q 020932 283 VVEGANHGYT-NHQAELVSVVLDFVKASL 310 (319)
Q Consensus 283 ~~~~~gH~~~-~~~~~~~~~i~~fl~~~~ 310 (319)
.++++||+.+ ++|+++.+.|.+|+++..
T Consensus 286 ~ld~aGHwVh~E~P~~~~~~i~~Fl~~~~ 314 (315)
T KOG2382|consen 286 ELDEAGHWVHLEKPEEFIESISEFLEEPE 314 (315)
T ss_pred ecccCCceeecCCHHHHHHHHHHHhcccC
Confidence 9999999975 778999999999987653
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.89 E-value=4.4e-22 Score=146.54 Aligned_cols=142 Identities=28% Similarity=0.513 Sum_probs=114.2
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHh--CCCceEEEEEE
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCG--ANRAVGAILGH 163 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~--~~~~~i~l~G~ 163 (319)
+||++||++++. ..|..+++.|+++||.|+.+|+|++|.+.. ..++.++++++.. .+.++++++||
T Consensus 1 ~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGSR--RDYQPLAEALAEQGYAVVAFDYPGHGDSDG----------ADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTTT--HHHHHHHHHHHHTTEEEEEESCTTSTTSHH----------SHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCCH--HHHHHHHHHHHHCCCEEEEEecCCCCccch----------hHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 589999999987 568999999999999999999999998722 2355556655422 27789999999
Q ss_pred ehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhh
Q 020932 164 SKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDA 243 (319)
Q Consensus 164 S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (319)
|+||.+++.++.+.+.++++|++++... ...+
T Consensus 69 S~Gg~~a~~~~~~~~~v~~~v~~~~~~~-~~~~----------------------------------------------- 100 (145)
T PF12695_consen 69 SMGGAIAANLAARNPRVKAVVLLSPYPD-SEDL----------------------------------------------- 100 (145)
T ss_dssp THHHHHHHHHHHHSTTESEEEEESESSG-CHHH-----------------------------------------------
T ss_pred ccCcHHHHHHhhhccceeEEEEecCccc-hhhh-----------------------------------------------
Confidence 9999999999998877999999999311 0000
Q ss_pred hhhccCCCcEEEEecCCCCccCcchHHHHHhhCC-CCeEEEecCCCcc
Q 020932 244 CLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP-NHKLHVVEGANHG 290 (319)
Q Consensus 244 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~ 290 (319)
...+.|+++++|++|..++.+..+++++.++ +.+++++++++|+
T Consensus 101 ---~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 101 ---AKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ---TTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ---hccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0236799999999999999999999988887 5799999999995
No 62
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.89 E-value=1e-20 Score=150.37 Aligned_cols=135 Identities=16% Similarity=0.177 Sum_probs=108.3
Q ss_pred EEEeCCCCceEEEEEEeCC---CceEEEEEccCCCCCC--ChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHH
Q 020932 64 LVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKD--DPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWR 138 (319)
Q Consensus 64 ~~~~~~dg~~l~~~~~~~~---~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~ 138 (319)
+.+++..|. +.++++.+. ++++||++||++.... ...|..+++.|+++||.|+++|+||||.|.+.....++..
T Consensus 3 ~~l~~~~g~-~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~ 81 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDV 81 (266)
T ss_pred EEecCCCCc-EEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHH
Confidence 456666564 455555443 3578999999987532 1457788999999999999999999999987665567788
Q ss_pred HHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhh
Q 020932 139 EADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDR 199 (319)
Q Consensus 139 ~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~ 199 (319)
+.+|+..+++++.+.+.++++++||||||.+++.++.++|+ ++++|+++|.......+...
T Consensus 82 ~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~ 143 (266)
T TIGR03101 82 WKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQF 143 (266)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHH
Confidence 89999999999988777899999999999999999999987 99999999876655444443
No 63
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.88 E-value=2.3e-20 Score=152.37 Aligned_cols=256 Identities=17% Similarity=0.207 Sum_probs=167.7
Q ss_pred ccccceEEEEEeCCCCceEEEEEEeC---------CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC
Q 020932 56 NLAVKQQELVIPNKYGERLVGVLHDA---------ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE 126 (319)
Q Consensus 56 ~~~~~~~~~~~~~~dg~~l~~~~~~~---------~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 126 (319)
.+.+..++.-++.+||..+..-+..+ +..|+||++||+.+++...+.+.++..+.++||+|++++.||+|.
T Consensus 88 ~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 88 KPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred CCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCC
Confidence 35567788888888998888866532 245999999999998877777899999999999999999999998
Q ss_pred CCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC---ccEEEEEeccccc---ccchhhh
Q 020932 127 SEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND---IRTFVNVSGRYDL---KGGIEDR 199 (319)
Q Consensus 127 s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~~---~~~~~~~ 199 (319)
+.-.....--..+.+|+.+++++++++ ...++..+|.||||++...|+.+..+ +.+.+.++.+.+. ...+...
T Consensus 168 ~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~ 247 (409)
T KOG1838|consen 168 SKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETP 247 (409)
T ss_pred CccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcc
Confidence 875543322355689999999999988 55579999999999999999988754 6666666665553 2223333
Q ss_pred hchHHHHHhhhccccccccCCC-----------cceeeeehhhHHhhhcc-------------chhhhhhhccCCCcEEE
Q 020932 200 LGKDYMEKIMQDGFIDVKNKTG-----------DVEYRVTEESLMDRLNT-------------NMHDACLQIDMECSVLT 255 (319)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~P~l~ 255 (319)
....+.......+......... ......+..++.+.+.. .......-.+|++|+|+
T Consensus 248 ~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~~I~VP~L~ 327 (409)
T KOG1838|consen 248 LYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVDKIKVPLLC 327 (409)
T ss_pred cchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcccccccEEE
Confidence 3333333332222221111000 00000111222221110 00001111267999999
Q ss_pred EecCCCCccCcch-HHHHHhhCCCCeEEEecCCCcc-Cccc----HHHHHHH-HHHHHHhhcC
Q 020932 256 IHGSSDKIIPLQD-AHEFDKIIPNHKLHVVEGANHG-YTNH----QAELVSV-VLDFVKASLK 311 (319)
Q Consensus 256 i~g~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~gH~-~~~~----~~~~~~~-i~~fl~~~~~ 311 (319)
|++.+|+++|.+. -.......|++-+++-..+||. +++. +..+.+. +.+|+.....
T Consensus 328 ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~~~~ 390 (409)
T KOG1838|consen 328 INAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGNAIF 390 (409)
T ss_pred EecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHHHHHh
Confidence 9999999998753 3555666788888888889999 4432 3444444 7788776543
No 64
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.87 E-value=1.2e-20 Score=158.75 Aligned_cols=245 Identities=13% Similarity=0.174 Sum_probs=149.4
Q ss_pred ccceEEEEEeCCCCceEEEEEEeC---CCceEEEEEccCCCCCCC---hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC
Q 020932 58 AVKQQELVIPNKYGERLVGVLHDA---ESSEIVVLCHGFRSTKDD---PSMVNLAVALQNEGISAFRFDFAGNGESEGSF 131 (319)
Q Consensus 58 ~~~~~~~~~~~~dg~~l~~~~~~~---~~~~~vv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 131 (319)
+.+..++.+.. ++..+..+. +. ..+++||++||+..+... ..++.+++.|.++||+|+++|++|+|.+...
T Consensus 35 ~~~~~~~v~~~-~~~~l~~~~-~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~- 111 (350)
T TIGR01836 35 GVTPKEVVYRE-DKVVLYRYT-PVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY- 111 (350)
T ss_pred CCCCCceEEEc-CcEEEEEec-CCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-
Confidence 33444444443 344444332 22 235679999998654411 1136899999999999999999999987543
Q ss_pred CCCChHHHH-hHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccch--hhh-------
Q 020932 132 QYGNYWREA-DDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI--EDR------- 199 (319)
Q Consensus 132 ~~~~~~~~~-~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~--~~~------- 199 (319)
.+++++. +++.++++++.+. +.++++++||||||.+++.+++.+|+ |+++|+++++.+..... ...
T Consensus 112 --~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~ 189 (350)
T TIGR01836 112 --LTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDI 189 (350)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCH
Confidence 2456665 4588888888776 66789999999999999999999988 99999999987653211 000
Q ss_pred ---------hchHHHHHhhh--cc-------cccccc--CCCc-------------ceeeeehhhHHhhh----ccchhh
Q 020932 200 ---------LGKDYMEKIMQ--DG-------FIDVKN--KTGD-------------VEYRVTEESLMDRL----NTNMHD 242 (319)
Q Consensus 200 ---------~~~~~~~~~~~--~~-------~~~~~~--~~~~-------------~~~~~~~~~~~~~~----~~~~~~ 242 (319)
+...+...... .. +..... .... .........+.+.+ ......
T Consensus 190 ~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~ 269 (350)
T TIGR01836 190 DLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLI 269 (350)
T ss_pred HHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCccc
Confidence 00101000000 00 000000 0000 00000000000000 000000
Q ss_pred ---------hhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCC--CeEEEecCCCccC-ccc---HHHHHHHHHHHHH
Q 020932 243 ---------ACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN--HKLHVVEGANHGY-TNH---QAELVSVVLDFVK 307 (319)
Q Consensus 243 ---------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~-~~~---~~~~~~~i~~fl~ 307 (319)
.....++++|+++++|++|.++|++.++.+.+.+++ .++++++ +||.. +.+ ++++++.|.+||+
T Consensus 270 ~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~ 348 (350)
T TIGR01836 270 NGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQ 348 (350)
T ss_pred CCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHH
Confidence 001125689999999999999999999999988864 5677777 68884 332 4789999999997
Q ss_pred h
Q 020932 308 A 308 (319)
Q Consensus 308 ~ 308 (319)
+
T Consensus 349 ~ 349 (350)
T TIGR01836 349 A 349 (350)
T ss_pred h
Confidence 5
No 65
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.87 E-value=7.8e-21 Score=148.99 Aligned_cols=195 Identities=23% Similarity=0.306 Sum_probs=129.9
Q ss_pred HHHHHHHHHHcCceEEEEcCCCCCCCCCCC----CCCChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHH
Q 020932 102 MVNLAVALQNEGISAFRFDFAGNGESEGSF----QYGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYA 174 (319)
Q Consensus 102 ~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~----~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a 174 (319)
|......|+++||.|+.+|+||.+...... ....-....+|+.++++++.++ +.++|.++|+|+||++++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 445678899999999999999987543211 1112245689999999999877 568999999999999999999
Q ss_pred hhcCC-ccEEEEEecccccccchhhhhchHHHH-HhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCc
Q 020932 175 SKYND-IRTFVNVSGRYDLKGGIEDRLGKDYME-KIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECS 252 (319)
Q Consensus 175 ~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 252 (319)
.++|+ ++++|..+|..+.......... +.. .....+.. .. ....+....... ......+++|
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~--~~~~~~~~~~~~------~~-----~~~~~~~~s~~~---~~~~~~~~~P 146 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI--YTKAEYLEYGDP------WD-----NPEFYRELSPIS---PADNVQIKPP 146 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC--HHHGHHHHHSST------TT-----SHHHHHHHHHGG---GGGGCGGGSE
T ss_pred cccceeeeeeeccceecchhcccccccc--cccccccccCcc------ch-----hhhhhhhhcccc---ccccccCCCC
Confidence 98899 9999999998776554433211 111 01000000 00 111111111000 1111015899
Q ss_pred EEEEecCCCCccCcchHHHHHhhCC----CCeEEEecCCCccCc--ccHHHHHHHHHHHHHhhcCC
Q 020932 253 VLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGANHGYT--NHQAELVSVVLDFVKASLKQ 312 (319)
Q Consensus 253 ~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~~~~~ 312 (319)
+|++||++|..||++++.++++.+. +++++++|++||.+. ....++.+.+.+||+++++.
T Consensus 147 ~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 147 VLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp EEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred EEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999988876653 479999999999764 34467899999999998864
No 66
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.86 E-value=7.8e-20 Score=143.74 Aligned_cols=179 Identities=23% Similarity=0.338 Sum_probs=122.0
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC-CCCCCCC--C--------ChHHHHhHHHHHHHHHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE-SEGSFQY--G--------NYWREADDLRAVVQYFC 151 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~-s~~~~~~--~--------~~~~~~~d~~~~i~~l~ 151 (319)
+.|.||++|++.+-. ...+.+++.|+++||.|+++|+-+... ....... . ..+...+|+.++++++.
T Consensus 13 ~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 578999999999877 467899999999999999999864433 1111100 0 01344678888999998
Q ss_pred hCC---CceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeee
Q 020932 152 GAN---RAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVT 228 (319)
Q Consensus 152 ~~~---~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (319)
++. .++|.++|+|+||.+++.++...+.+++.|...|........
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~~~~-------------------------------- 138 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPPPPL-------------------------------- 138 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGGGHH--------------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCCcch--------------------------------
Confidence 874 569999999999999999999886799999988811110000
Q ss_pred hhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhC----CCCeEEEecCCCccCccc---------H
Q 020932 229 EESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII----PNHKLHVVEGANHGYTNH---------Q 295 (319)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~---------~ 295 (319)
....++++|+++++|++|+.++.+..+.+.+.+ ...++++|+|++|.|... .
T Consensus 139 ---------------~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa 203 (218)
T PF01738_consen 139 ---------------EDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAA 203 (218)
T ss_dssp ---------------HHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHH
T ss_pred ---------------hhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHH
Confidence 001145899999999999999998776666554 467999999999998521 2
Q ss_pred HHHHHHHHHHHHhhc
Q 020932 296 AELVSVVLDFVKASL 310 (319)
Q Consensus 296 ~~~~~~i~~fl~~~~ 310 (319)
++.++.+.+||+++|
T Consensus 204 ~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 204 EDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHhcC
Confidence 567899999998865
No 67
>PRK11460 putative hydrolase; Provisional
Probab=99.85 E-value=9.2e-20 Score=143.91 Aligned_cols=173 Identities=18% Similarity=0.251 Sum_probs=117.7
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC----------CC-C---ChHHHHhHHHHHHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF----------QY-G---NYWREADDLRAVVQ 148 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~----------~~-~---~~~~~~~d~~~~i~ 148 (319)
.+|+||++||+|++.. .|..+++.|...++.+..++++|...+.... .. . ......+.+.+.++
T Consensus 15 ~~~~vIlLHG~G~~~~--~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 15 AQQLLLLFHGVGDNPV--AMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCcEEEEEeCCCCChH--HHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 5689999999999994 5889999998876666666666653221100 00 0 11222334445555
Q ss_pred HHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcce
Q 020932 149 YFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVE 224 (319)
Q Consensus 149 ~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (319)
++..+ +.++|+++|||+||.+++.++..+|+ +.+++.+++.+.... .
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~~-----------------------~------ 143 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASLP-----------------------E------ 143 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccccc-----------------------c------
Confidence 55444 34689999999999999999988888 666777765321000 0
Q ss_pred eeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC----CCeEEEecCCCccCcccHHHHHH
Q 020932 225 YRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGANHGYTNHQAELVS 300 (319)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~ 300 (319)
....++|++++||++|.++|.+.++++.+.+. ++++++++++||.+. .+..+
T Consensus 144 ---------------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~---~~~~~ 199 (232)
T PRK11460 144 ---------------------TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID---PRLMQ 199 (232)
T ss_pred ---------------------cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC---HHHHH
Confidence 00126899999999999999999888877664 468889999999985 34444
Q ss_pred HHHHHHHhhc
Q 020932 301 VVLDFVKASL 310 (319)
Q Consensus 301 ~i~~fl~~~~ 310 (319)
.+.+||.+.+
T Consensus 200 ~~~~~l~~~l 209 (232)
T PRK11460 200 FALDRLRYTV 209 (232)
T ss_pred HHHHHHHHHc
Confidence 5555555444
No 68
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.85 E-value=7.9e-20 Score=139.50 Aligned_cols=241 Identities=15% Similarity=0.167 Sum_probs=148.2
Q ss_pred eEEEEEeCCCCceEEEEEEeC--CCceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCC-CCCCh
Q 020932 61 QQELVIPNKYGERLVGVLHDA--ESSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSF-QYGNY 136 (319)
Q Consensus 61 ~~~~~~~~~dg~~l~~~~~~~--~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~-~~~~~ 136 (319)
.+.+.++..++ ++..++..+ ..+|.++++||+|.+. ..|..+++.|... ..+|+++|+||||++.-.. ...+.
T Consensus 50 kedv~i~~~~~-t~n~Y~t~~~~t~gpil~l~HG~G~S~--LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~ 126 (343)
T KOG2564|consen 50 KEDVSIDGSDL-TFNVYLTLPSATEGPILLLLHGGGSSA--LSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSL 126 (343)
T ss_pred ccccccCCCcc-eEEEEEecCCCCCccEEEEeecCcccc--hhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCH
Confidence 45666665544 566666555 3789999999999999 5589999998765 4578889999999998655 44677
Q ss_pred HHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc--CCccEEEEEeccccc----ccchh----------hhh
Q 020932 137 WREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY--NDIRTFVNVSGRYDL----KGGIE----------DRL 200 (319)
Q Consensus 137 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~--p~v~~~v~~~~~~~~----~~~~~----------~~~ 200 (319)
+.+..|+.++++.+-.....+|+|+||||||.+|...|... |.+.++++++-.-.. ...+. +.+
T Consensus 127 eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDVVEgtAmeAL~~m~~fL~~rP~~F~Si 206 (343)
T KOG2564|consen 127 ETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDVVEGTAMEALNSMQHFLRNRPKSFKSI 206 (343)
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchhhhceEEEEEechHHHHHHHHHHHHHhcCCccccch
Confidence 88999999999999877777899999999999998877654 668888887632100 00000 000
Q ss_pred chHHHHHhhhcccccc-----------cc-CC-CcceeeeehhhHHhhhc---cchhhhhhhccCCCcEEEEecCCCCcc
Q 020932 201 GKDYMEKIMQDGFIDV-----------KN-KT-GDVEYRVTEESLMDRLN---TNMHDACLQIDMECSVLTIHGSSDKII 264 (319)
Q Consensus 201 ~~~~~~~~~~~~~~~~-----------~~-~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~P~l~i~g~~D~~~ 264 (319)
....-..+........ .. .. ....|+........++. ....... ....+|-++|-+..|..-
T Consensus 207 ~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~gLS~~F--l~~p~~klLilAg~d~LD 284 (343)
T KOG2564|consen 207 EDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFKGLSDKF--LGLPVPKLLILAGVDRLD 284 (343)
T ss_pred hhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHhhhhhHh--hCCCccceeEEecccccC
Confidence 0000000000000000 00 01 12233332222222221 1111111 134678777777777552
Q ss_pred CcchHHHHHhhCCCCeEEEecCCCccCccc-HHHHHHHHHHHHHhh
Q 020932 265 PLQDAHEFDKIIPNHKLHVVEGANHGYTNH-QAELVSVVLDFVKAS 309 (319)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~i~~fl~~~ 309 (319)
.-...-+.-...++.+++.+||+.+++ |.++...+..|+.++
T Consensus 285 ---kdLtiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~Rn 327 (343)
T KOG2564|consen 285 ---KDLTIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIRN 327 (343)
T ss_pred ---cceeeeeeccceeeeeecccCceeccCCcchHHHHHHHHHhhh
Confidence 111112222456899999999998865 678999999888764
No 69
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=1.8e-19 Score=151.73 Aligned_cols=234 Identities=14% Similarity=0.120 Sum_probs=143.8
Q ss_pred ceEEEEEEeC---CCceEEEEEccCCCCCCC-----------hhHHHHHH---HHHHcCceEEEEcCCCCCCCCC-----
Q 020932 72 ERLVGVLHDA---ESSEIVVLCHGFRSTKDD-----------PSMVNLAV---ALQNEGISAFRFDFAGNGESEG----- 129 (319)
Q Consensus 72 ~~l~~~~~~~---~~~~~vv~~hG~~~~~~~-----------~~~~~~~~---~l~~~G~~v~~~d~~G~G~s~~----- 129 (319)
.++.|..++. .+.++||++|++++++.. ..|..++- .|-..-|-||++|..|.|.|..
T Consensus 41 ~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~ 120 (389)
T PRK06765 41 VQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVIT 120 (389)
T ss_pred ceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCC
Confidence 4556555553 246899999999886511 12444332 2333349999999998764211
Q ss_pred ----------------CCCCCChHHHHhHHHHHHHHHHhCCCceEE-EEEEehhHHHHHHHHhhcCC-ccEEEEEecccc
Q 020932 130 ----------------SFQYGNYWREADDLRAVVQYFCGANRAVGA-ILGHSKGGSVVLLYASKYND-IRTFVNVSGRYD 191 (319)
Q Consensus 130 ----------------~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 191 (319)
.....++.++++++.++++.+ +.+++. ++||||||++++.+|.++|+ ++++|++++...
T Consensus 121 tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l---gi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 121 TGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL---GIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 112246778888888888877 888886 99999999999999999999 999999987543
Q ss_pred cccch----hhhhch-----------------------HHHHH----------hhhccccccccCCCc----ceeeeehh
Q 020932 192 LKGGI----EDRLGK-----------------------DYMEK----------IMQDGFIDVKNKTGD----VEYRVTEE 230 (319)
Q Consensus 192 ~~~~~----~~~~~~-----------------------~~~~~----------~~~~~~~~~~~~~~~----~~~~~~~~ 230 (319)
..... .+.... ..... +....+......... .......+
T Consensus 198 ~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e 277 (389)
T PRK06765 198 NDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFE 277 (389)
T ss_pred CChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHH
Confidence 32211 000000 00000 000000000000000 00000111
Q ss_pred hHHhhh--------c-------------cch-----hhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC----CCe
Q 020932 231 SLMDRL--------N-------------TNM-----HDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHK 280 (319)
Q Consensus 231 ~~~~~~--------~-------------~~~-----~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~ 280 (319)
.+.... . .+. ........+++|+|+|+|++|.++|++..+++.+.++ +++
T Consensus 278 ~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~ 357 (389)
T PRK06765 278 KEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAE 357 (389)
T ss_pred HHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeE
Confidence 111100 0 000 0011122579999999999999999999999988886 689
Q ss_pred EEEecC-CCccC-cccHHHHHHHHHHHHHh
Q 020932 281 LHVVEG-ANHGY-TNHQAELVSVVLDFVKA 308 (319)
Q Consensus 281 ~~~~~~-~gH~~-~~~~~~~~~~i~~fl~~ 308 (319)
++++++ +||.. .++++++.+.|.+||++
T Consensus 358 l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 358 VYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 999985 89996 57889999999999976
No 70
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.84 E-value=1.9e-18 Score=135.70 Aligned_cols=199 Identities=21% Similarity=0.298 Sum_probs=152.7
Q ss_pred EEEEEeCCCCceEEEEEEeCC---CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC-CCCCCCC------
Q 020932 62 QELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN-GESEGSF------ 131 (319)
Q Consensus 62 ~~~~~~~~dg~~l~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~-G~s~~~~------ 131 (319)
+.+.++..| ..+.+++..|. +.|.||++|++.+-. ...+.+++.|+..||.|+++|+-+. |.+....
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~--~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~ 79 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLN--PHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAEL 79 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCc--hHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHH
Confidence 456777765 67888777654 348999999999988 4689999999999999999998763 3222111
Q ss_pred -C----CCChHHHHhHHHHHHHHHHhCC---CceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchH
Q 020932 132 -Q----YGNYWREADDLRAVVQYFCGAN---RAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKD 203 (319)
Q Consensus 132 -~----~~~~~~~~~d~~~~i~~l~~~~---~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~ 203 (319)
. .........|+.+.+++|..+. .++|.++|+||||.+++.++.+.|++++.+...|.........
T Consensus 80 ~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~~~~~~------ 153 (236)
T COG0412 80 ETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIADDTAD------ 153 (236)
T ss_pred hhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCCCcccc------
Confidence 0 1122566789999999998874 6789999999999999999999889999999987543211110
Q ss_pred HHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC----CC
Q 020932 204 YMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NH 279 (319)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~ 279 (319)
..++++|+|+..|+.|..+|.+....+.+.+. +.
T Consensus 154 ------------------------------------------~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~ 191 (236)
T COG0412 154 ------------------------------------------APKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKV 191 (236)
T ss_pred ------------------------------------------cccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCe
Confidence 11568999999999999999887777765553 56
Q ss_pred eEEEecCCCccCccc------------HHHHHHHHHHHHHhhcC
Q 020932 280 KLHVVEGANHGYTNH------------QAELVSVVLDFVKASLK 311 (319)
Q Consensus 280 ~~~~~~~~gH~~~~~------------~~~~~~~i~~fl~~~~~ 311 (319)
++.+++++.|.+... .+..++++.+||++.+.
T Consensus 192 ~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 192 DLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred eEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 789999998997632 24678999999998764
No 71
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.83 E-value=2.6e-20 Score=148.05 Aligned_cols=187 Identities=21% Similarity=0.326 Sum_probs=118.3
Q ss_pred ceEEEEcCCCCCCCCC----CCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEec
Q 020932 114 ISAFRFDFAGNGESEG----SFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSG 188 (319)
Q Consensus 114 ~~v~~~d~~G~G~s~~----~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 188 (319)
|+|+++|+||+|.|++ .....+.++.++++..+++.+ +.++++++||||||.+++.+|+.+|+ |+++|++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~ 77 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL---GIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISP 77 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH---TTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh---CCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEee
Confidence 6899999999999995 234456677788888888877 77789999999999999999999999 999999999
Q ss_pred ccc----cc-cchhh-hhchH----HHH----H---hhhccc---ccccc----CC----Cccee-e-eehhhHHhhhc-
Q 020932 189 RYD----LK-GGIED-RLGKD----YME----K---IMQDGF---IDVKN----KT----GDVEY-R-VTEESLMDRLN- 237 (319)
Q Consensus 189 ~~~----~~-~~~~~-~~~~~----~~~----~---~~~~~~---~~~~~----~~----~~~~~-~-~~~~~~~~~~~- 237 (319)
... .. ..... ..... ... . ...... ..... .. ....+ . .........+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (230)
T PF00561_consen 78 PPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWN 157 (230)
T ss_dssp SSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred eccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccc
Confidence 621 00 00000 00000 000 0 000000 00000 00 00000 0 00000000000
Q ss_pred -----cchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccC-cccHHHHHHHHH
Q 020932 238 -----TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY-TNHQAELVSVVL 303 (319)
Q Consensus 238 -----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~i~ 303 (319)
...........+++|+++++|++|.++|++....+.+.+++.++++++++||.. .++++++.+.|.
T Consensus 158 ~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 158 ALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 000001111257999999999999999999999999999999999999999996 467777777664
No 72
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.83 E-value=2.8e-19 Score=147.16 Aligned_cols=237 Identities=19% Similarity=0.264 Sum_probs=140.3
Q ss_pred cccceEEEEEeCCCCceEEEEEEeCC---CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCC
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY 133 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~~---~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~ 133 (319)
.+.+.++++|+.. |.+|.++++-|. +.|+||++.|+.+..+. ++..+.+.|..+|+.++++|.||.|.|....-.
T Consensus 161 ~~~~i~~v~iP~e-g~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD-~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~ 238 (411)
T PF06500_consen 161 SDYPIEEVEIPFE-GKTIPGYLHLPSGEKPYPTVIVCGGLDSLQED-LYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT 238 (411)
T ss_dssp SSSEEEEEEEEET-TCEEEEEEEESSSSS-EEEEEEE--TTS-GGG-GHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-
T ss_pred CCCCcEEEEEeeC-CcEEEEEEEcCCCCCCCCEEEEeCCcchhHHH-HHHHHHHHHHhCCCEEEEEccCCCcccccCCCC
Confidence 3456788888876 588998887664 45777787777777753 456666789999999999999999998654322
Q ss_pred CChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcC-CccEEEEEeccccccc---chhhhhchHHHH
Q 020932 134 GNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYN-DIRTFVNVSGRYDLKG---GIEDRLGKDYME 206 (319)
Q Consensus 134 ~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p-~v~~~v~~~~~~~~~~---~~~~~~~~~~~~ 206 (319)
.+.+.. ..++++++... +..+|.++|.|+||++|.++|...+ .++++|..++.....- .....+...+..
T Consensus 239 ~D~~~l---~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d 315 (411)
T PF06500_consen 239 QDSSRL---HQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLD 315 (411)
T ss_dssp S-CCHH---HHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-HHHHH
T ss_pred cCHHHH---HHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCCHHHHH
Confidence 222333 34667777665 5679999999999999999987665 4999999999653211 111122222222
Q ss_pred HhhhccccccccCCCcceeeeehhhHHhhh---ccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEE
Q 020932 207 KIMQDGFIDVKNKTGDVEYRVTEESLMDRL---NTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHV 283 (319)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 283 (319)
.+...- +.. ....+.+...+ +.-..-.....+.++|+|.+.|++|.++|.+..+-++..-.+.+...
T Consensus 316 ~LA~rl--------G~~--~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~ 385 (411)
T PF06500_consen 316 VLASRL--------GMA--AVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALR 385 (411)
T ss_dssp HHHHHC--------T-S--CE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEE
T ss_pred HHHHHh--------CCc--cCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceee
Confidence 221110 000 01122222221 11111111123558999999999999999999999888877788888
Q ss_pred ecCCCccCcccHHHHHHHHHHHHHhhc
Q 020932 284 VEGANHGYTNHQAELVSVVLDFVKASL 310 (319)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~i~~fl~~~~ 310 (319)
++... .+..-++....+.+||++.+
T Consensus 386 ~~~~~--~~~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 386 IPSKP--LHMGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp E-SSS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCc--cccchHHHHHHHHHHHHHhc
Confidence 87543 12223677889999998764
No 73
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.83 E-value=9.2e-19 Score=143.24 Aligned_cols=235 Identities=17% Similarity=0.166 Sum_probs=145.3
Q ss_pred cccceEEEEEeCCCCceEEEEEEeCC----CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC--
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDAE----SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-- 130 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~-- 130 (319)
..+...++++.+.+|..+.+++..|. +.|+||.+||+++... .+.... .++.+||.|+.+|.||.|.....
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~--~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~ 128 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSG--DPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYR 128 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GG--GHHHHH-HHHHTT-EEEEE--TTTSSSS-B-S
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCC--Cccccc-ccccCCeEEEEecCCCCCCCCCCcc
Confidence 56788899999999999999998764 5589999999999863 344433 47889999999999999832210
Q ss_pred ------------------CCCCChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecc
Q 020932 131 ------------------FQYGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGR 189 (319)
Q Consensus 131 ------------------~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~ 189 (319)
....-+.....|...+++.+.+. +.++|.+.|.|+||.+++.+|+..++|++++...|.
T Consensus 129 ~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~ 208 (320)
T PF05448_consen 129 GSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPF 208 (320)
T ss_dssp SBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESES
T ss_pred ccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCC
Confidence 00011233468899999999887 567999999999999999999999999999999886
Q ss_pred cccccchhhhhc-----hHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCcc
Q 020932 190 YDLKGGIEDRLG-----KDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKII 264 (319)
Q Consensus 190 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 264 (319)
+.-......... ..+...+.... ..........+.+..-.... ....+++|+++-.|-.|.++
T Consensus 209 l~d~~~~~~~~~~~~~y~~~~~~~~~~d-----------~~~~~~~~v~~~L~Y~D~~n-fA~ri~~pvl~~~gl~D~~c 276 (320)
T PF05448_consen 209 LCDFRRALELRADEGPYPEIRRYFRWRD-----------PHHEREPEVFETLSYFDAVN-FARRIKCPVLFSVGLQDPVC 276 (320)
T ss_dssp SSSHHHHHHHT--STTTHHHHHHHHHHS-----------CTHCHHHHHHHHHHTT-HHH-HGGG--SEEEEEEETT-SSS
T ss_pred ccchhhhhhcCCccccHHHHHHHHhccC-----------CCcccHHHHHHHHhhhhHHH-HHHHcCCCEEEEEecCCCCC
Confidence 543222111110 00111110000 00011122222222111111 11256999999999999999
Q ss_pred CcchHHHHHhhCC-CCeEEEecCCCccCcccHHHHHHHHHHHHHh
Q 020932 265 PLQDAHEFDKIIP-NHKLHVVEGANHGYTNHQAELVSVVLDFVKA 308 (319)
Q Consensus 265 ~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 308 (319)
|+......++.++ .+++.++|..||.... +...++..+||.+
T Consensus 277 PP~t~fA~yN~i~~~K~l~vyp~~~He~~~--~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 277 PPSTQFAAYNAIPGPKELVVYPEYGHEYGP--EFQEDKQLNFLKE 319 (320)
T ss_dssp -HHHHHHHHCC--SSEEEEEETT--SSTTH--HHHHHHHHHHHHH
T ss_pred CchhHHHHHhccCCCeeEEeccCcCCCchh--hHHHHHHHHHHhc
Confidence 9999999999887 5789999999998642 2226677788875
No 74
>PRK10115 protease 2; Provisional
Probab=99.82 E-value=1.6e-18 Score=156.38 Aligned_cols=244 Identities=13% Similarity=0.117 Sum_probs=167.0
Q ss_pred ccceEEEEEeCCCCceEEEE-EEeC-----CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC
Q 020932 58 AVKQQELVIPNKYGERLVGV-LHDA-----ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF 131 (319)
Q Consensus 58 ~~~~~~~~~~~~dg~~l~~~-~~~~-----~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 131 (319)
.+..+++.+++.||.++.++ ++.+ ++.|+||++||..+......|......|.++||.|+.++.||-|.-....
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w 492 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQW 492 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHH
Confidence 56889999999999999984 4433 35699999999887775455677778899999999999999976544221
Q ss_pred CC----CChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhh-hh--
Q 020932 132 QY----GNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIED-RL-- 200 (319)
Q Consensus 132 ~~----~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~-~~-- 200 (319)
.. ..-....+|+.+++++|.++ +.+++.+.|.|.||+++..++.++|+ ++++|+..|..++...+.. .+
T Consensus 493 ~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~ 572 (686)
T PRK10115 493 YEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPL 572 (686)
T ss_pred HHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCC
Confidence 11 00013478999999999887 56799999999999999999999999 9999999998876543211 11
Q ss_pred chHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCc-EEEEecCCCCccCcchHHHHHhhCC--
Q 020932 201 GKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECS-VLTIHGSSDKIIPLQDAHEFDKIIP-- 277 (319)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~-- 277 (319)
...+...+ + .....+............... +++.| +|+++|.+|..||+.++.+++..+.
T Consensus 573 ~~~~~~e~---G------------~p~~~~~~~~l~~~SP~~~v~--~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~ 635 (686)
T PRK10115 573 TTGEFEEW---G------------NPQDPQYYEYMKSYSPYDNVT--AQAYPHLLVTTGLHDSQVQYWEPAKWVAKLREL 635 (686)
T ss_pred ChhHHHHh---C------------CCCCHHHHHHHHHcCchhccC--ccCCCceeEEecCCCCCcCchHHHHHHHHHHhc
Confidence 11111111 0 000111111111122222222 34778 6677999999999999988877663
Q ss_pred --CCeEEEe---cCCCccCcccHHHH---HHHHHHHHHhhcCCCCCCCC
Q 020932 278 --NHKLHVV---EGANHGYTNHQAEL---VSVVLDFVKASLKQDHPGTQ 318 (319)
Q Consensus 278 --~~~~~~~---~~~gH~~~~~~~~~---~~~i~~fl~~~~~~~~~~~~ 318 (319)
+.+++++ +++||.......+. ......|+-..+....|+++
T Consensus 636 ~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~~~~~~~ 684 (686)
T PRK10115 636 KTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQGTLPATP 684 (686)
T ss_pred CCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhCCcCCCcC
Confidence 3567777 89999965444333 33456888888888777664
No 75
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.82 E-value=1.1e-18 Score=151.08 Aligned_cols=214 Identities=14% Similarity=0.134 Sum_probs=132.4
Q ss_pred EEEEEEeCC----CceEEEEEccCCCCCCChhH-----HHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHH-hHH
Q 020932 74 LVGVLHDAE----SSEIVVLCHGFRSTKDDPSM-----VNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREA-DDL 143 (319)
Q Consensus 74 l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~-~d~ 143 (319)
+..+.|.|. .+++||++||+.... +.+ +.+++.|.++||+|+++|++|+|.+..... +++++ +++
T Consensus 174 ~eLi~Y~P~t~~~~~~PlLiVp~~i~k~--yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~---~ddY~~~~i 248 (532)
T TIGR01838 174 FQLIQYEPTTETVHKTPLLIVPPWINKY--YILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT---FDDYIRDGV 248 (532)
T ss_pred EEEEEeCCCCCcCCCCcEEEECcccccc--eeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC---hhhhHHHHH
Confidence 344444443 468999999998776 344 479999999999999999999998865432 33344 457
Q ss_pred HHHHHHHHhC-CCceEEEEEEehhHHHHH----HHHhhc-CC-ccEEEEEecccccccchh--hhhchH---HHH-Hhhh
Q 020932 144 RAVVQYFCGA-NRAVGAILGHSKGGSVVL----LYASKY-ND-IRTFVNVSGRYDLKGGIE--DRLGKD---YME-KIMQ 210 (319)
Q Consensus 144 ~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~----~~a~~~-p~-v~~~v~~~~~~~~~~~~~--~~~~~~---~~~-~~~~ 210 (319)
.++++.+.+. +.++++++|||+||.++. .+++.. ++ |++++++++..++...-. ...... ..+ .+..
T Consensus 249 ~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~ 328 (532)
T TIGR01838 249 IAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGG 328 (532)
T ss_pred HHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHh
Confidence 7777776654 778899999999999852 244554 66 999999998877543210 000000 000 0000
Q ss_pred ccccc----------cc--------------cCCC--cc---ee-----eeehh----hHHhhhccchhh---------h
Q 020932 211 DGFID----------VK--------------NKTG--DV---EY-----RVTEE----SLMDRLNTNMHD---------A 243 (319)
Q Consensus 211 ~~~~~----------~~--------------~~~~--~~---~~-----~~~~~----~~~~~~~~~~~~---------~ 243 (319)
.++.+ .. .... .+ .+ ..... .+.+.+..+... .
T Consensus 329 ~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~ 408 (532)
T TIGR01838 329 GGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVR 408 (532)
T ss_pred cCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEe
Confidence 01000 00 0000 00 00 00000 011111111100 0
Q ss_pred hhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCc
Q 020932 244 CLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT 292 (319)
Q Consensus 244 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 292 (319)
.....+++|+++++|++|.++|++.+..+.+.+++.+..+++++||..+
T Consensus 409 ~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 409 LDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAG 457 (532)
T ss_pred cchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchH
Confidence 1112579999999999999999999999999999999999999999953
No 76
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.81 E-value=1.6e-18 Score=163.71 Aligned_cols=225 Identities=16% Similarity=0.165 Sum_probs=141.7
Q ss_pred CceEEEEEccCCCCCCChhHHH-----HHHHHHHcCceEEEEcCCCCCCCCCCCC--CCChHHHHhHHHHHHHHHHhCCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVN-----LAVALQNEGISAFRFDFAGNGESEGSFQ--YGNYWREADDLRAVVQYFCGANR 155 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~-----~~~~l~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~d~~~~i~~l~~~~~ 155 (319)
.+++||++||++.+. +.|.. +.+.|.++||+|+++|+ |.++.... ..++.+++..+.++++.++....
T Consensus 66 ~~~plllvhg~~~~~--~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~ 140 (994)
T PRK07868 66 VGPPVLMVHPMMMSA--DMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTG 140 (994)
T ss_pred CCCcEEEECCCCCCc--cceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhC
Confidence 458999999999988 45654 47899999999999994 55554322 24556666666666666554555
Q ss_pred ceEEEEEEehhHHHHHHHHhhc-CC-ccEEEEEecccccccch----hhh------------------hchHHHHH-h--
Q 020932 156 AVGAILGHSKGGSVVLLYASKY-ND-IRTFVNVSGRYDLKGGI----EDR------------------LGKDYMEK-I-- 208 (319)
Q Consensus 156 ~~i~l~G~S~Gg~~a~~~a~~~-p~-v~~~v~~~~~~~~~~~~----~~~------------------~~~~~~~~-~-- 208 (319)
++++++||||||.+++.+++.+ ++ |+++|+++++.++.... ... +....... +
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 6899999999999999988755 44 99999988876542210 000 00000000 0
Q ss_pred ------hh---ccccccccCCC------------ccee-ee---ehhhHHhhhcc-c-hh-----hh---hhhccCCCcE
Q 020932 209 ------MQ---DGFIDVKNKTG------------DVEY-RV---TEESLMDRLNT-N-MH-----DA---CLQIDMECSV 253 (319)
Q Consensus 209 ------~~---~~~~~~~~~~~------------~~~~-~~---~~~~~~~~~~~-~-~~-----~~---~~~~~~~~P~ 253 (319)
.. ........... ...| .. ....+...+.. + .. .. ....++++|+
T Consensus 221 l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~ 300 (994)
T PRK07868 221 LDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPV 300 (994)
T ss_pred cChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCE
Confidence 00 00000000000 0000 00 00111111110 0 00 00 1123678999
Q ss_pred EEEecCCCCccCcchHHHHHhhCCCCeE-EEecCCCccCc----ccHHHHHHHHHHHHHhhcCC
Q 020932 254 LTIHGSSDKIIPLQDAHEFDKIIPNHKL-HVVEGANHGYT----NHQAELVSVVLDFVKASLKQ 312 (319)
Q Consensus 254 l~i~g~~D~~~~~~~~~~~~~~~~~~~~-~~~~~~gH~~~----~~~~~~~~~i~~fl~~~~~~ 312 (319)
|+|+|++|.++|++.++.+.+.++++++ .+++++||+.+ .-+++++..|.+||.+....
T Consensus 301 L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 301 LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhccC
Confidence 9999999999999999999999999987 67899999953 23578999999999987643
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.81 E-value=2.4e-17 Score=133.96 Aligned_cols=226 Identities=15% Similarity=0.125 Sum_probs=128.6
Q ss_pred ceEEEEEeCC-CCceEEEEEEeC-----CCceEEEEEccCCCCCCChhHHHHHHHH-HHcCceEEEEcC--CCCCCCCCC
Q 020932 60 KQQELVIPNK-YGERLVGVLHDA-----ESSEIVVLCHGFRSTKDDPSMVNLAVAL-QNEGISAFRFDF--AGNGESEGS 130 (319)
Q Consensus 60 ~~~~~~~~~~-dg~~l~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~--~G~G~s~~~ 130 (319)
..+..++.+. -+..+.+.++.| ++.|+|+++||++++...+.+......+ .+.|+.|+++|. +|+|.+...
T Consensus 12 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~ 91 (275)
T TIGR02821 12 TQGFYRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGED 91 (275)
T ss_pred EEEEEEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCc
Confidence 3444444332 355666666544 2568999999999988653333333445 456999999998 555433210
Q ss_pred C-----------------C---CCCh-HHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEec
Q 020932 131 F-----------------Q---YGNY-WREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSG 188 (319)
Q Consensus 131 ~-----------------~---~~~~-~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 188 (319)
. . ...+ ....+++..+++.....+.++++++||||||++++.++.++|+ +++++++++
T Consensus 92 ~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~ 171 (275)
T TIGR02821 92 DAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAP 171 (275)
T ss_pred ccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECC
Confidence 0 0 0011 1123455555543222256789999999999999999999999 999999998
Q ss_pred ccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCc-c
Q 020932 189 RYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPL-Q 267 (319)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~ 267 (319)
..+..... ............ .... +. . .+............|+++++|+.|..++. .
T Consensus 172 ~~~~~~~~---~~~~~~~~~l~~--------~~~~-~~--------~--~~~~~~~~~~~~~~plli~~G~~D~~v~~~~ 229 (275)
T TIGR02821 172 IVAPSRCP---WGQKAFSAYLGA--------DEAA-WR--------S--YDASLLVADGGRHSTILIDQGTADQFLDEQL 229 (275)
T ss_pred ccCcccCc---chHHHHHHHhcc--------cccc-hh--------h--cchHHHHhhcccCCCeeEeecCCCcccCccc
Confidence 76542110 001111111100 0000 00 0 00000011112367999999999999998 4
Q ss_pred hHHHHHhhC----CCCeEEEecCCCccCcccHHHHHHHHHHHHHh
Q 020932 268 DAHEFDKII----PNHKLHVVEGANHGYTNHQAELVSVVLDFVKA 308 (319)
Q Consensus 268 ~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 308 (319)
....+.+.+ ..+++.++||.+|.+..- ..+....++|..+
T Consensus 230 ~~~~~~~~l~~~g~~v~~~~~~g~~H~f~~~-~~~~~~~~~~~~~ 273 (275)
T TIGR02821 230 RPDAFEQACRAAGQALTLRRQAGYDHSYYFI-ASFIADHLRHHAE 273 (275)
T ss_pred cHHHHHHHHHHcCCCeEEEEeCCCCccchhH-HHhHHHHHHHHHh
Confidence 444444443 357899999999997422 3334444455544
No 78
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=1e-18 Score=132.28 Aligned_cols=221 Identities=14% Similarity=0.137 Sum_probs=149.0
Q ss_pred CCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHH-HHhCCCceEE
Q 020932 81 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQY-FCGANRAVGA 159 (319)
Q Consensus 81 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~-l~~~~~~~i~ 159 (319)
++.+..++++|-.|+++ ..|+.+...|... +.++.+++||+|..-......+++.+++.+...+.. . ..+++.
T Consensus 4 ~~~~~~L~cfP~AGGsa--~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~---~d~P~a 77 (244)
T COG3208 4 PGARLRLFCFPHAGGSA--SLFRSWSRRLPAD-IELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPL---LDAPFA 77 (244)
T ss_pred CCCCceEEEecCCCCCH--HHHHHHHhhCCch-hheeeecCCCcccccCCcccccHHHHHHHHHHHhcccc---CCCCee
Confidence 34667889999999888 6789999988775 999999999999887777777778888877777773 3 345799
Q ss_pred EEEEehhHHHHHHHHhhcCC----ccEEEEEecccc---cccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhH
Q 020932 160 ILGHSKGGSVVLLYASKYND----IRTFVNVSGRYD---LKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESL 232 (319)
Q Consensus 160 l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (319)
++||||||++|.++|.+... ..++.+.+.... ....+...-...+++.+...+..+..-........+....+
T Consensus 78 lfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPil 157 (244)
T COG3208 78 LFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPIL 157 (244)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHH
Confidence 99999999999999987643 566666654332 22233334445566666554443321111111111111111
Q ss_pred Hhhh-ccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC-CCeEEEecCCCccCcc-cHHHHHHHHHHHHHh
Q 020932 233 MDRL-NTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP-NHKLHVVEGANHGYTN-HQAELVSVVLDFVKA 308 (319)
Q Consensus 233 ~~~~-~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~-~~~~~~~~i~~fl~~ 308 (319)
...+ ............+.||+.++.|++|..++.+....+.+..+ ..++.+++| ||+++. ..+++...|.+.+..
T Consensus 158 RAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 158 RADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLAH 235 (244)
T ss_pred HHHHHHhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhhh
Confidence 1111 00111111223679999999999999999999998988887 579999995 999864 456788877777753
No 79
>PLN02442 S-formylglutathione hydrolase
Probab=99.79 E-value=3.4e-17 Score=133.29 Aligned_cols=211 Identities=15% Similarity=0.162 Sum_probs=123.7
Q ss_pred ceEEEEEeC-CCCceEEEEEEeC-----CCceEEEEEccCCCCCCChhH-HHHHHHHHHcCceEEEEcCCCCCC-----C
Q 020932 60 KQQELVIPN-KYGERLVGVLHDA-----ESSEIVVLCHGFRSTKDDPSM-VNLAVALQNEGISAFRFDFAGNGE-----S 127 (319)
Q Consensus 60 ~~~~~~~~~-~dg~~l~~~~~~~-----~~~~~vv~~hG~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~~G~G~-----s 127 (319)
..+++.+.+ .-|..+.+.++-| .+.|+|+++||++++...+.. ..+.+.+...|+.|+.+|..++|. +
T Consensus 17 ~~~~~~~~s~~l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~ 96 (283)
T PLN02442 17 FNRRYKHFSSTLGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEA 96 (283)
T ss_pred EEEEEEEeccccCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCc
Confidence 334444443 2355666666543 256899999999988743221 334566677799999999887661 1
Q ss_pred CC------CC-----C------CCChHHHHhHHHHHHHHHHh-CCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEec
Q 020932 128 EG------SF-----Q------YGNYWREADDLRAVVQYFCG-ANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSG 188 (319)
Q Consensus 128 ~~------~~-----~------~~~~~~~~~d~~~~i~~l~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 188 (319)
.. .. . ........+++...++.... .+.++++++||||||+.|+.++.++|+ +++++.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~ 176 (283)
T PLN02442 97 DSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAP 176 (283)
T ss_pred cccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECC
Confidence 10 00 0 00012234555555544322 267789999999999999999999999 999999998
Q ss_pred ccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhh-hhhccCCCcEEEEecCCCCccCcc
Q 020932 189 RYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDA-CLQIDMECSVLTIHGSSDKIIPLQ 267 (319)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~l~i~g~~D~~~~~~ 267 (319)
..+..... ........... . .... .... +.... ......++|+++++|++|.+++..
T Consensus 177 ~~~~~~~~---~~~~~~~~~~g----~------------~~~~-~~~~--d~~~~~~~~~~~~~pvli~~G~~D~~v~~~ 234 (283)
T PLN02442 177 IANPINCP---WGQKAFTNYLG----S------------DKAD-WEEY--DATELVSKFNDVSATILIDQGEADKFLKEQ 234 (283)
T ss_pred ccCcccCc---hhhHHHHHHcC----C------------Chhh-HHHc--ChhhhhhhccccCCCEEEEECCCCcccccc
Confidence 76533111 00111111100 0 0000 0000 11100 011134789999999999998863
Q ss_pred -hHHHHHhhC----CCCeEEEecCCCccCc
Q 020932 268 -DAHEFDKII----PNHKLHVVEGANHGYT 292 (319)
Q Consensus 268 -~~~~~~~~~----~~~~~~~~~~~gH~~~ 292 (319)
.++.+.+.+ .+++++++++.+|.+.
T Consensus 235 ~~s~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 235 LLPENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred ccHHHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 344443332 3578999999999965
No 80
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.79 E-value=1.6e-17 Score=124.72 Aligned_cols=225 Identities=16% Similarity=0.221 Sum_probs=132.1
Q ss_pred EEEeCCCCceEEEEEEeCC-----CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC-CCCCCCCCCCChH
Q 020932 64 LVIPNKYGERLVGVLHDAE-----SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN-GESEGSFQYGNYW 137 (319)
Q Consensus 64 ~~~~~~dg~~l~~~~~~~~-----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~-G~s~~~~~~~~~~ 137 (319)
..+...+|.+|+.|...|. .+++||+.+|++... ..+..++.+|+.+||+|+.+|...| |.|++.....++.
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrm--dh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms 82 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRM--DHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMS 82 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGG--GGGHHHHHHHHTTT--EEEE---B-------------HH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHH--HHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchH
Confidence 3455578999999887764 458999999999998 4689999999999999999998876 9999998888888
Q ss_pred HHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhccccccc
Q 020932 138 READDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVK 217 (319)
Q Consensus 138 ~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (319)
...+++..+++|+...+..++.|+.-|+.|.+|+..|.+ .++.-+|..-+..++...+.+.+...++..... ..+
T Consensus 83 ~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~-i~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~----~lp 157 (294)
T PF02273_consen 83 IGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAAD-INLSFLITAVGVVNLRDTLEKALGYDYLQLPIE----QLP 157 (294)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTT-S--SEEEEES--S-HHHHHHHHHSS-GGGS-GG----G--
T ss_pred HhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhc-cCcceEEEEeeeeeHHHHHHHHhccchhhcchh----hCC
Confidence 999999999999998899999999999999999999985 468888888888777666555544443332111 111
Q ss_pred cCCCcceeeeehhh-HHhhhccchhh----hhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC--CCeEEEecCCCcc
Q 020932 218 NKTGDVEYRVTEES-LMDRLNTNMHD----ACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP--NHKLHVVEGANHG 290 (319)
Q Consensus 218 ~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~ 290 (319)
............+. ..+.+...+.. ......+.+|++.+++++|.+|......++...+. .++++.++|+.|.
T Consensus 158 ~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~Hd 237 (294)
T PF02273_consen 158 EDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHD 237 (294)
T ss_dssp SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-
T ss_pred CcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccch
Confidence 11111112222222 22223222211 11223568999999999999999989988888664 4788999999999
Q ss_pred CcccH
Q 020932 291 YTNHQ 295 (319)
Q Consensus 291 ~~~~~ 295 (319)
+.+++
T Consensus 238 L~enl 242 (294)
T PF02273_consen 238 LGENL 242 (294)
T ss_dssp TTSSH
T ss_pred hhhCh
Confidence 87664
No 81
>PLN00021 chlorophyllase
Probab=99.78 E-value=5e-17 Score=132.95 Aligned_cols=194 Identities=18% Similarity=0.203 Sum_probs=126.7
Q ss_pred EEEEEEeC---CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHH
Q 020932 74 LVGVLHDA---ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYF 150 (319)
Q Consensus 74 l~~~~~~~---~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l 150 (319)
+.+.++.| ++.|+||++||++.+. ..|..+++.|+++||.|+++|++|++.... ....++..++++|+
T Consensus 39 ~p~~v~~P~~~g~~PvVv~lHG~~~~~--~~y~~l~~~Las~G~~VvapD~~g~~~~~~-------~~~i~d~~~~~~~l 109 (313)
T PLN00021 39 KPLLVATPSEAGTYPVLLFLHGYLLYN--SFYSQLLQHIASHGFIVVAPQLYTLAGPDG-------TDEIKDAAAVINWL 109 (313)
T ss_pred ceEEEEeCCCCCCCCEEEEECCCCCCc--ccHHHHHHHHHhCCCEEEEecCCCcCCCCc-------hhhHHHHHHHHHHH
Confidence 44444433 3668999999999887 458899999999999999999998643211 11234455555555
Q ss_pred Hh-----------CCCceEEEEEEehhHHHHHHHHhhcCC------ccEEEEEecccccccchhhhhchHHHHHhhhccc
Q 020932 151 CG-----------ANRAVGAILGHSKGGSVVLLYASKYND------IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGF 213 (319)
Q Consensus 151 ~~-----------~~~~~i~l~G~S~Gg~~a~~~a~~~p~------v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (319)
.+ .+.++++++|||+||.+++.+|..+++ ++++|+++|......... .
T Consensus 110 ~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~-~-------------- 174 (313)
T PLN00021 110 SSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQ-T-------------- 174 (313)
T ss_pred HhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccC-C--------------
Confidence 43 134689999999999999999988763 788888888543211000 0
Q ss_pred cccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCC-----c----cCcc-hHHHHHhhCC-CCeEE
Q 020932 214 IDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDK-----I----IPLQ-DAHEFDKIIP-NHKLH 282 (319)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~-----~----~~~~-~~~~~~~~~~-~~~~~ 282 (319)
.... + .......++.+|+|++.+..|. . .|.. +..++++.++ .+...
T Consensus 175 ------~p~i------------l----~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~ 232 (313)
T PLN00021 175 ------PPPV------------L----TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHF 232 (313)
T ss_pred ------CCcc------------c----ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeee
Confidence 0000 0 0000111357999999999763 2 2233 3367777775 67788
Q ss_pred EecCCCccCc-ccH-----------------------HHHHHHHHHHHHhhcCCC
Q 020932 283 VVEGANHGYT-NHQ-----------------------AELVSVVLDFVKASLKQD 313 (319)
Q Consensus 283 ~~~~~gH~~~-~~~-----------------------~~~~~~i~~fl~~~~~~~ 313 (319)
+++++||+-+ ++. +.+...+..||+.++..+
T Consensus 233 ~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 233 VAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred eecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 8899999943 211 245667789998888654
No 82
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.77 E-value=2.5e-17 Score=146.43 Aligned_cols=127 Identities=20% Similarity=0.187 Sum_probs=102.1
Q ss_pred EeCCCCceEEEEEEeCC---CceEEEEEccCCCCCC--ChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHH
Q 020932 66 IPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKD--DPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREA 140 (319)
Q Consensus 66 ~~~~dg~~l~~~~~~~~---~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~ 140 (319)
|+..||.+|.+.++.|. +.|+||++||++.... ..........|+++||.|+++|+||+|.|.+.....+ ...+
T Consensus 1 i~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~~~~ 79 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-SDEA 79 (550)
T ss_pred CcCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-cccc
Confidence 35678999998877653 5689999999997652 0012335578899999999999999999998764433 5678
Q ss_pred hHHHHHHHHHHhC--CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccc
Q 020932 141 DDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK 193 (319)
Q Consensus 141 ~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 193 (319)
+|+.++|+++.++ ...+|+++|+|+||.+++.+|...|. ++++|..++..+..
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLY 135 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchh
Confidence 9999999999887 34689999999999999999998877 99999988876654
No 83
>PRK10162 acetyl esterase; Provisional
Probab=99.77 E-value=2.9e-16 Score=130.06 Aligned_cols=227 Identities=15% Similarity=0.227 Sum_probs=140.5
Q ss_pred cceEEEEEeCCCCceEEEEEEeCC--CceEEEEEccCCCCCCC-hhHHHHHHHHHH-cCceEEEEcCCCCCCCCCCCCCC
Q 020932 59 VKQQELVIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDD-PSMVNLAVALQN-EGISAFRFDFAGNGESEGSFQYG 134 (319)
Q Consensus 59 ~~~~~~~~~~~dg~~l~~~~~~~~--~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~~~~~ 134 (319)
+..+.+.++..+| .+.+.++.|. +.|+||++||.|....+ ..+..+...|+. .|+.|+.+|+|...+.
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~------- 126 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQPDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA------- 126 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCCCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC-------
Confidence 4577888887777 4666666553 46899999998743211 346778888877 4999999999964332
Q ss_pred ChHHHHhHHHHHHHHHHhC------CCceEEEEEEehhHHHHHHHHhhc-------CCccEEEEEecccccccchhh-h-
Q 020932 135 NYWREADDLRAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKY-------NDIRTFVNVSGRYDLKGGIED-R- 199 (319)
Q Consensus 135 ~~~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~-------p~v~~~v~~~~~~~~~~~~~~-~- 199 (319)
.+....+|+.++++|+.+. +.++|+|+|+|+||.+++.++... +.++++++++|..+....... .
T Consensus 127 ~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~ 206 (318)
T PRK10162 127 RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLL 206 (318)
T ss_pred CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHh
Confidence 1233467888888887653 356899999999999999888653 238999999987664321100 0
Q ss_pred ------hchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhc-cCCCcEEEEecCCCCccCcchHHHH
Q 020932 200 ------LGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQI-DMECSVLTIHGSSDKIIPLQDAHEF 272 (319)
Q Consensus 200 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~l~i~g~~D~~~~~~~~~~~ 272 (319)
+.......+.. .+.. ...... ........ ... ..-.|+++++|+.|.+.+ +++.+
T Consensus 207 ~~~~~~l~~~~~~~~~~-~y~~--~~~~~~----------~p~~~p~~---~~l~~~lPp~~i~~g~~D~L~d--e~~~~ 268 (318)
T PRK10162 207 GGVWDGLTQQDLQMYEE-AYLS--NDADRE----------SPYYCLFN---NDLTRDVPPCFIAGAEFDPLLD--DSRLL 268 (318)
T ss_pred CCCccccCHHHHHHHHH-HhCC--CccccC----------CcccCcch---hhhhcCCCCeEEEecCCCcCcC--hHHHH
Confidence 00000000000 0000 000000 00000000 001 113699999999999864 45555
Q ss_pred HhhC----CCCeEEEecCCCccCc------ccHHHHHHHHHHHHHhhcC
Q 020932 273 DKII----PNHKLHVVEGANHGYT------NHQAELVSVVLDFVKASLK 311 (319)
Q Consensus 273 ~~~~----~~~~~~~~~~~gH~~~------~~~~~~~~~i~~fl~~~~~ 311 (319)
.+.+ ..+++++++|..|.+. .+..+..+.+.+||++.++
T Consensus 269 ~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 269 YQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred HHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 5444 3579999999999863 1245778889999988764
No 84
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.76 E-value=2e-17 Score=129.62 Aligned_cols=178 Identities=20% Similarity=0.276 Sum_probs=107.2
Q ss_pred CceEEEEEccCCCCCCChhHHHHHH-HHHHcCceEEEEcCCC------CCC---CCCC-----C----CCCChHHHHhHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAV-ALQNEGISAFRFDFAG------NGE---SEGS-----F----QYGNYWREADDL 143 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~-~l~~~G~~v~~~d~~G------~G~---s~~~-----~----~~~~~~~~~~d~ 143 (319)
..++||++||+|++. ..+..+.. .+......++.++-|. .|. +--+ . ....+....+.+
T Consensus 13 ~~~lvi~LHG~G~~~--~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 13 AKPLVILLHGYGDSE--DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp -SEEEEEE--TTS-H--HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CceEEEEECCCCCCc--chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 678999999999988 34554444 2223346677765431 122 1110 0 011122334455
Q ss_pred HHHHHHHHhC--CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHHHHhhhccccccccCC
Q 020932 144 RAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKT 220 (319)
Q Consensus 144 ~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (319)
.++|+...+. +.++|++.|+|+||++|+.++.++|+ +.++|++++...........
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~--------------------- 149 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDR--------------------- 149 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCC---------------------
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccccccc---------------------
Confidence 6666655444 56689999999999999999999998 99999999966432221100
Q ss_pred CcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhC----CCCeEEEecCCCccCcccHH
Q 020932 221 GDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII----PNHKLHVVEGANHGYTNHQA 296 (319)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~ 296 (319)
... .-++|++++||++|+++|.+.+++..+.+ .+++++.+++.||... .
T Consensus 150 -----------------------~~~-~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~---~ 202 (216)
T PF02230_consen 150 -----------------------PEA-LAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS---P 202 (216)
T ss_dssp -----------------------HCC-CCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----H
T ss_pred -----------------------ccc-cCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC---H
Confidence 000 11679999999999999998877766555 3578999999999974 5
Q ss_pred HHHHHHHHHHHhhc
Q 020932 297 ELVSVVLDFVKASL 310 (319)
Q Consensus 297 ~~~~~i~~fl~~~~ 310 (319)
+..+.+.+||++++
T Consensus 203 ~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 203 EELRDLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhhC
Confidence 67778899998753
No 85
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.76 E-value=5.4e-17 Score=126.89 Aligned_cols=171 Identities=15% Similarity=0.135 Sum_probs=106.5
Q ss_pred CceEEEEEccCCCCCCChhHH---HHHHHHHHcCceEEEEcCCCCCCCCCCCCC------CChHHHHhHHHHHHHHHHhC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMV---NLAVALQNEGISAFRFDFAGNGESEGSFQY------GNYWREADDLRAVVQYFCGA 153 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~---~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~------~~~~~~~~d~~~~i~~l~~~ 153 (319)
+.|+||++||.+++... +. .+.+.+.+.||.|+++|++|++.+...... ........++..+++++.++
T Consensus 12 ~~P~vv~lHG~~~~~~~--~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 12 PRALVLALHGCGQTASA--YVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCEEEEeCCCCCCHHH--HhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 67899999999987743 32 345555667999999999998754321110 01123467778888887765
Q ss_pred ---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeeh
Q 020932 154 ---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTE 229 (319)
Q Consensus 154 ---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (319)
+.++++|+|||+||.+++.++.++|+ +.+++.+++........... ..... . . ....
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~----~~~~~--------~--~-----~~~~ 150 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSIS----ATPQM--------C--T-----AATA 150 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchh----hHhhc--------C--C-----CCCH
Confidence 44689999999999999999999999 88888888754322111000 00000 0 0 0000
Q ss_pred hhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC
Q 020932 230 ESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP 277 (319)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (319)
..+.+..... .. .......|++++||++|.+||++.++.+.+.+.
T Consensus 151 ~~~~~~~~~~-~~--~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 151 ASVCRLVRGM-QS--EYNGPTPIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred HHHHHHHhcc-CC--cccCCCCeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 1111111000 00 001224457899999999999999988877653
No 86
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.74 E-value=3.3e-16 Score=126.87 Aligned_cols=217 Identities=21% Similarity=0.271 Sum_probs=129.3
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcC--ceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEE
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEG--ISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 161 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G--~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 161 (319)
+|+|+++||++++.. .|......+.... |+++.+|+||||.|. .. .......++++..+++.+ +..++.++
T Consensus 21 ~~~i~~~hg~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~~---~~~~~~l~ 93 (282)
T COG0596 21 GPPLVLLHGFPGSSS--VWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDAL---GLEKVVLV 93 (282)
T ss_pred CCeEEEeCCCCCchh--hhHHHHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHHh---CCCceEEE
Confidence 559999999999884 3554323333321 899999999999997 11 123333477788888866 66669999
Q ss_pred EEehhHHHHHHHHhhcCC-ccEEEEEecccccc------------cchhhh--hch-----HHHHHhhhcc-cccccc--
Q 020932 162 GHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK------------GGIEDR--LGK-----DYMEKIMQDG-FIDVKN-- 218 (319)
Q Consensus 162 G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~------------~~~~~~--~~~-----~~~~~~~~~~-~~~~~~-- 218 (319)
|||+||.+++.++.++|+ ++++|++++..... ...... ... .......... ......
T Consensus 94 G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (282)
T COG0596 94 GHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAA 173 (282)
T ss_pred EecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccc
Confidence 999999999999999998 99999999754310 000000 000 0000000000 000000
Q ss_pred ---CCCcce--eeeehh-hHHhh----h---ccch---hhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCC-CeE
Q 020932 219 ---KTGDVE--YRVTEE-SLMDR----L---NTNM---HDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN-HKL 281 (319)
Q Consensus 219 ---~~~~~~--~~~~~~-~~~~~----~---~~~~---~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~ 281 (319)
...... ...... ..... . .... ........+++|+++++|++|.+.+......+.+..++ .++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~ 253 (282)
T COG0596 174 RAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARL 253 (282)
T ss_pred hhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceE
Confidence 000000 000000 00000 0 0000 01112235579999999999966666556677777775 899
Q ss_pred EEecCCCccCc-ccHHHHHHHHHHHHH
Q 020932 282 HVVEGANHGYT-NHQAELVSVVLDFVK 307 (319)
Q Consensus 282 ~~~~~~gH~~~-~~~~~~~~~i~~fl~ 307 (319)
.+++++||+.+ ++++.+.+.+.+|++
T Consensus 254 ~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 254 VVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred EEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 99999999975 666778777777443
No 87
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.71 E-value=4.2e-16 Score=118.91 Aligned_cols=236 Identities=17% Similarity=0.131 Sum_probs=155.3
Q ss_pred cccceEEEEEeCCCCceEEEEEEeCC----CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC-
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDAE----SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF- 131 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~- 131 (319)
+.++.-+++++..+|.+|.+|+.-|. +.|.||-.||+++... .|..+. .++..||.|+.+|.||.|.|+.+.
T Consensus 52 ~~ve~ydvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g--~~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~ 128 (321)
T COG3458 52 PRVEVYDVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGG--EWHDML-HWAVAGYAVFVMDVRGQGSSSQDTA 128 (321)
T ss_pred CceEEEEEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCC--Cccccc-cccccceeEEEEecccCCCccccCC
Confidence 45677888999999999999998664 5689999999999983 454443 346679999999999999874211
Q ss_pred ----C----------------CCChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCCccEEEEEec
Q 020932 132 ----Q----------------YGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSG 188 (319)
Q Consensus 132 ----~----------------~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~ 188 (319)
. ..-+.....|+..+++.+.+. +.++|.+.|.|.||.+++.+++..|.|++++++-|
T Consensus 129 ~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~rik~~~~~~P 208 (321)
T COG3458 129 DPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDPRIKAVVADYP 208 (321)
T ss_pred CCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcChhhhccccccc
Confidence 0 001123357777888877665 67799999999999999999999999999999998
Q ss_pred ccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcch
Q 020932 189 RYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQD 268 (319)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 268 (319)
.+.-...+.+.........+..- +... . ......++.+..-.... ....+++|+|+..|--|+++|+..
T Consensus 209 fl~df~r~i~~~~~~~ydei~~y-~k~h----~-----~~e~~v~~TL~yfD~~n-~A~RiK~pvL~svgL~D~vcpPst 277 (321)
T COG3458 209 FLSDFPRAIELATEGPYDEIQTY-FKRH----D-----PKEAEVFETLSYFDIVN-LAARIKVPVLMSVGLMDPVCPPST 277 (321)
T ss_pred ccccchhheeecccCcHHHHHHH-HHhc----C-----chHHHHHHHHhhhhhhh-HHHhhccceEEeecccCCCCCChh
Confidence 76533322222111111111000 0000 0 00122222222111111 112469999999999999999999
Q ss_pred HHHHHhhCC-CCeEEEecCCCccCcccHHHHHHHHHHHHHh
Q 020932 269 AHEFDKIIP-NHKLHVVEGANHGYTNHQAELVSVVLDFVKA 308 (319)
Q Consensus 269 ~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 308 (319)
.-..++.++ .+++.+++.-+|.-.. .-..+.+..|+..
T Consensus 278 qFA~yN~l~~~K~i~iy~~~aHe~~p--~~~~~~~~~~l~~ 316 (321)
T COG3458 278 QFAAYNALTTSKTIEIYPYFAHEGGP--GFQSRQQVHFLKI 316 (321)
T ss_pred hHHHhhcccCCceEEEeeccccccCc--chhHHHHHHHHHh
Confidence 999998886 4678888877888532 2223345556554
No 88
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.69 E-value=1.5e-15 Score=112.78 Aligned_cols=186 Identities=16% Similarity=0.212 Sum_probs=135.4
Q ss_pred EEEEEEeCC-CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC-CCCCCCC--------CCCChHHHHhHH
Q 020932 74 LVGVLHDAE-SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN-GESEGSF--------QYGNYWREADDL 143 (319)
Q Consensus 74 l~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~-G~s~~~~--------~~~~~~~~~~d~ 143 (319)
+..++.+.. ++..||++--..+... .--+..+..++.+||.|+++|+..- -.+.... ...+......++
T Consensus 28 ldaYv~gs~~~~~~li~i~DvfG~~~-~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i 106 (242)
T KOG3043|consen 28 LDAYVVGSTSSKKVLIVIQDVFGFQF-PNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDI 106 (242)
T ss_pred eeEEEecCCCCCeEEEEEEeeecccc-HHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHH
Confidence 444555544 3457777777666553 2367889999999999999997532 1111100 011223346899
Q ss_pred HHHHHHHHhCC-CceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCc
Q 020932 144 RAVVQYFCGAN-RAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGD 222 (319)
Q Consensus 144 ~~~i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (319)
..++++++.++ ..+|.++|+||||-++..+....+.+.+++.+-|.+.-...+
T Consensus 107 ~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~d~~D~-------------------------- 160 (242)
T KOG3043|consen 107 TAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFVDSADI-------------------------- 160 (242)
T ss_pred HHHHHHHHHcCCcceeeEEEEeecceEEEEeeccchhheeeeEecCCcCChhHH--------------------------
Confidence 99999999885 779999999999999999988888888888888754321111
Q ss_pred ceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCC-----CeEEEecCCCccCcc----
Q 020932 223 VEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN-----HKLHVVEGANHGYTN---- 293 (319)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~~---- 293 (319)
..+++|++++.|+.|..+|++....+.+.+.+ .++.++++.+|.++.
T Consensus 161 ------------------------~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~ 216 (242)
T KOG3043|consen 161 ------------------------ANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRAN 216 (242)
T ss_pred ------------------------hcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccC
Confidence 14589999999999999999988877776642 369999999999762
Q ss_pred --c------HHHHHHHHHHHHHhhc
Q 020932 294 --H------QAELVSVVLDFVKASL 310 (319)
Q Consensus 294 --~------~~~~~~~i~~fl~~~~ 310 (319)
. .++..+.+.+||++++
T Consensus 217 ~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 217 ISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhh
Confidence 1 2567888899998875
No 89
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.68 E-value=2e-14 Score=111.35 Aligned_cols=126 Identities=17% Similarity=0.182 Sum_probs=96.1
Q ss_pred eEEEEEeCCCCceEE--EEEEeC--C--CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC-C
Q 020932 61 QQELVIPNKYGERLV--GVLHDA--E--SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-Y 133 (319)
Q Consensus 61 ~~~~~~~~~dg~~l~--~~~~~~--~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~ 133 (319)
...+.+...+|..+. +.|... . +..+||-+||.+++. ..++.+...|.+.|++++.+++||+|.+++... .
T Consensus 6 ~~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH--~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~ 83 (297)
T PF06342_consen 6 RKLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSH--NDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQ 83 (297)
T ss_pred EEEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCc--cchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccc
Confidence 344555555564443 334332 2 345899999999999 458999999999999999999999999987663 3
Q ss_pred CChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccc
Q 020932 134 GNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYD 191 (319)
Q Consensus 134 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~ 191 (319)
.+-.+...-+.++++.+.-. ++++++|||.|+-.|+.++..+| ..++++++|+..
T Consensus 84 ~~n~er~~~~~~ll~~l~i~--~~~i~~gHSrGcenal~la~~~~-~~g~~lin~~G~ 138 (297)
T PF06342_consen 84 YTNEERQNFVNALLDELGIK--GKLIFLGHSRGCENALQLAVTHP-LHGLVLINPPGL 138 (297)
T ss_pred cChHHHHHHHHHHHHHcCCC--CceEEEEeccchHHHHHHHhcCc-cceEEEecCCcc
Confidence 45466677788888877322 46899999999999999999986 569999988643
No 90
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.68 E-value=4.1e-16 Score=116.05 Aligned_cols=154 Identities=14% Similarity=0.192 Sum_probs=98.2
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehh
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKG 166 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~G 166 (319)
|+++||++++.....+..+.+.|... ++|-..++ .....+.+.+.+.+.+..+ .+++++||||+|
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~----------~~P~~~~W~~~l~~~i~~~----~~~~ilVaHSLG 65 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW----------DNPDLDEWVQALDQAIDAI----DEPTILVAHSLG 65 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC------------TS--HHHHHHHHHHCCHC-----TTTEEEEEETHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc----------CCCCHHHHHHHHHHHHhhc----CCCeEEEEeCHH
Confidence 68999999998754445666777766 77777666 1224566666666666543 335999999999
Q ss_pred HHHHHHHH-hhcCC-ccEEEEEecccccc-cchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhh
Q 020932 167 GSVVLLYA-SKYND-IRTFVNVSGRYDLK-GGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDA 243 (319)
Q Consensus 167 g~~a~~~a-~~~p~-v~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (319)
+..++.++ ..... |+++++++|+.... ...... ...+. .
T Consensus 66 c~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~---------------------------------~~~f~-----~ 107 (171)
T PF06821_consen 66 CLTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPE---------------------------------LDGFT-----P 107 (171)
T ss_dssp HHHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCG---------------------------------GCCCT-----T
T ss_pred HHHHHHHHhhcccccccEEEEEcCCCcccccchhhh---------------------------------ccccc-----c
Confidence 99999999 44444 99999999964320 000000 00000 0
Q ss_pred hhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCccc
Q 020932 244 CLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNH 294 (319)
Q Consensus 244 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 294 (319)
.......+|.++|.+++|+++|.+.++++++.+ +++++.++++||+...+
T Consensus 108 ~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 108 LPRDPLPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp SHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGG
T ss_pred CcccccCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCccccc
Confidence 000022567799999999999999999999998 88999999999997544
No 91
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.68 E-value=3.2e-15 Score=112.37 Aligned_cols=183 Identities=17% Similarity=0.227 Sum_probs=114.0
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcC--ceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEe
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEG--ISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 164 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G--~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 164 (319)
||++||+.++..+.-...+.+.+.+.+ ..+.++|++ .......+.+.++|+.. ..+.+.|+|.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-----------~~p~~a~~~l~~~i~~~---~~~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-----------PFPEEAIAQLEQLIEEL---KPENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-----------cCHHHHHHHHHHHHHhC---CCCCeEEEEEC
Confidence 799999999997755566777787765 456677765 12334445555555544 44559999999
Q ss_pred hhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhh
Q 020932 165 KGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDAC 244 (319)
Q Consensus 165 ~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (319)
|||+.|..++.+++ +++ |+++|.+.....+...++..... .....+.+....... +..-. .
T Consensus 68 lGG~~A~~La~~~~-~~a-vLiNPav~p~~~l~~~iG~~~~~-------------~~~e~~~~~~~~~~~-l~~l~---~ 128 (187)
T PF05728_consen 68 LGGFYATYLAERYG-LPA-VLINPAVRPYELLQDYIGEQTNP-------------YTGESYELTEEHIEE-LKALE---V 128 (187)
T ss_pred hHHHHHHHHHHHhC-CCE-EEEcCCCCHHHHHHHhhCccccC-------------CCCccceechHhhhh-cceEe---c
Confidence 99999999988874 444 99999887655554333221100 001111111111111 11000 0
Q ss_pred hhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCcccHHHHHHHHHHHH
Q 020932 245 LQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFV 306 (319)
Q Consensus 245 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl 306 (319)
.......+++++.++.|.+++.+.+... ..++..++.+|++|.+. +-++..+.|.+|+
T Consensus 129 ~~~~~~~~~lvll~~~DEvLd~~~a~~~---~~~~~~~i~~ggdH~f~-~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 129 PYPTNPERYLVLLQTGDEVLDYREAVAK---YRGCAQIIEEGGDHSFQ-DFEEYLPQIIAFL 186 (187)
T ss_pred cccCCCccEEEEEecCCcccCHHHHHHH---hcCceEEEEeCCCCCCc-cHHHHHHHHHHhh
Confidence 0012357999999999999988555433 34556667788899975 3566777888886
No 92
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.67 E-value=3.7e-15 Score=121.05 Aligned_cols=123 Identities=20% Similarity=0.224 Sum_probs=92.5
Q ss_pred CCceEEEEEEeC--C---CceEEEEEccCCCCCCChhHHHH---------HHHHHHcCceEEEEcCCCCCCCCCCCCCCC
Q 020932 70 YGERLVGVLHDA--E---SSEIVVLCHGFRSTKDDPSMVNL---------AVALQNEGISAFRFDFAGNGESEGSFQYGN 135 (319)
Q Consensus 70 dg~~l~~~~~~~--~---~~~~vv~~hG~~~~~~~~~~~~~---------~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~ 135 (319)
||.+|.+.++.| . +.|+||..|+++..... ..... ...|+++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~-~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQT-ASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-H-HHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCc-ccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-
Confidence 688999988766 2 56899999999965411 11111 12389999999999999999999988654
Q ss_pred hHHHHhHHHHHHHHHHhC--CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccccccc
Q 020932 136 YWREADDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG 194 (319)
Q Consensus 136 ~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~ 194 (319)
.....+|..++|+|+..+ ...+|.++|.|++|..++.+|+..|. +++++...+..+...
T Consensus 79 ~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 79 SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 578899999999999998 34589999999999999999996655 999999988777665
No 93
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.67 E-value=1.4e-15 Score=113.37 Aligned_cols=241 Identities=15% Similarity=0.108 Sum_probs=141.2
Q ss_pred EEEeCCCCceEEEEEEeCC-CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCC---CChHHH
Q 020932 64 LVIPNKYGERLVGVLHDAE-SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY---GNYWRE 139 (319)
Q Consensus 64 ~~~~~~dg~~l~~~~~~~~-~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~---~~~~~~ 139 (319)
..++..||..+.+..++.. +.+--+++.|..+... .++++++..+++.||.|+++|+||.|.|+..... ..+.++
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~-~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADGKASGRLVVAGATGVGQ-YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccccCCCccCccccccCCCCCCCcEEecccCCcch-hHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhh
Confidence 6678889999998887754 3343444444444443 5789999999999999999999999999865432 345555
Q ss_pred H-hHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchH----------HHHH
Q 020932 140 A-DDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKD----------YMEK 207 (319)
Q Consensus 140 ~-~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~----------~~~~ 207 (319)
+ .|+.++++++++. ...+...+|||+||.+...+.. ++...+....+....+...+....... .+..
T Consensus 87 A~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~ 165 (281)
T COG4757 87 ARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTF 165 (281)
T ss_pred hhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-CcccceeeEeccccccccchhhhhcccceeeccccccchhh
Confidence 4 6999999999875 4457899999999997766444 345444444433222222111110000 0000
Q ss_pred hhh---ccccccccCCCcceeeeehhhHH-hhhc-cch--h-hhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCC
Q 020932 208 IMQ---DGFIDVKNKTGDVEYRVTEESLM-DRLN-TNM--H-DACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNH 279 (319)
Q Consensus 208 ~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~--~-~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~ 279 (319)
+.. ..+....+......++....... ..+. .+. . ....-..+++|+..+...+|+.+|+.....+.+..+|+
T Consensus 166 w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nA 245 (281)
T COG4757 166 WKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNA 245 (281)
T ss_pred ccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcC
Confidence 000 00000000000000000000000 0000 000 0 00011246899999999999999999999999888875
Q ss_pred e--EEEecC----CCccC-cccH-HHHHHHHHHHH
Q 020932 280 K--LHVVEG----ANHGY-TNHQ-AELVSVVLDFV 306 (319)
Q Consensus 280 ~--~~~~~~----~gH~~-~~~~-~~~~~~i~~fl 306 (319)
. .+.++. .||+- .-++ +..++++++|+
T Consensus 246 pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 246 PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 4 444443 58984 3444 77888888886
No 94
>COG0400 Predicted esterase [General function prediction only]
Probab=99.66 E-value=3.7e-15 Score=113.39 Aligned_cols=173 Identities=17% Similarity=0.270 Sum_probs=114.5
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC--CCCC----C---CCCCCCChHHHHhHHHHHHHHHHhC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG--NGES----E---GSFQYGNYWREADDLRAVVQYFCGA 153 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G--~G~s----~---~~~~~~~~~~~~~d~~~~i~~l~~~ 153 (319)
..|+||++||+|++. ..+.++.+.+..+ +.++.+.=+- .|.- . ...+........+.+.++++.+..+
T Consensus 17 ~~~~iilLHG~Ggde--~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 17 AAPLLILLHGLGGDE--LDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCcEEEEEecCCCCh--hhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 456899999999887 3455655555554 5555442110 1100 0 1111112222234444555444443
Q ss_pred ---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeeh
Q 020932 154 ---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTE 229 (319)
Q Consensus 154 ---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (319)
+.++++++|+|.||++++.+..++|+ ++++|+++|...........
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~~~~------------------------------ 143 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPELLPD------------------------------ 143 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCccccc------------------------------
Confidence 45799999999999999999999998 99999999866543221000
Q ss_pred hhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC----CCeEEEecCCCccCcccHHHHHHHHHHH
Q 020932 230 ESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGANHGYTNHQAELVSVVLDF 305 (319)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~~~~~~~~~i~~f 305 (319)
....|+++++|+.|+++|...+.++.+.+. +++...++ .||... .+..+.+.+|
T Consensus 144 ------------------~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~---~e~~~~~~~w 201 (207)
T COG0400 144 ------------------LAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGHEIP---PEELEAARSW 201 (207)
T ss_pred ------------------cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCCcCC---HHHHHHHHHH
Confidence 126899999999999999988877776653 57888888 799974 4556667778
Q ss_pred HHhhc
Q 020932 306 VKASL 310 (319)
Q Consensus 306 l~~~~ 310 (319)
+.+..
T Consensus 202 l~~~~ 206 (207)
T COG0400 202 LANTL 206 (207)
T ss_pred HHhcc
Confidence 87653
No 95
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.66 E-value=8.5e-15 Score=133.20 Aligned_cols=209 Identities=15% Similarity=0.174 Sum_probs=130.5
Q ss_pred HHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-----------------CCceEEEEEEehh
Q 020932 104 NLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-----------------NRAVGAILGHSKG 166 (319)
Q Consensus 104 ~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-----------------~~~~i~l~G~S~G 166 (319)
.+.+.|+.+||.|+..|.||.|.|++...... ....+|..++|+|+..+ ...+|.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 46688999999999999999999999765433 66789999999999843 1468999999999
Q ss_pred HHHHHHHHhhcCC-ccEEEEEecccccccchhhh--h---------chHHHHHhhhcccccccc-CCCcceeeeehhhHH
Q 020932 167 GSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDR--L---------GKDYMEKIMQDGFIDVKN-KTGDVEYRVTEESLM 233 (319)
Q Consensus 167 g~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 233 (319)
|.+++.+|...|. ++++|.+++..++....... + ....+............. ......+......+.
T Consensus 349 G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 428 (767)
T PRK05371 349 GTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELT 428 (767)
T ss_pred HHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhh
Confidence 9999999888766 99999998876543221110 0 000000000000000000 000000000000000
Q ss_pred -----------hhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC----CCeEEEecCCCccCc--ccHH
Q 020932 234 -----------DRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGANHGYT--NHQA 296 (319)
Q Consensus 234 -----------~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~--~~~~ 296 (319)
..+.. ........++++|+|+|+|..|..++++.+.++++.+. ..++++.+ .+|... ..+.
T Consensus 429 ~~~~~~~~~y~~fW~~-rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~H~~~~~~~~~ 506 (767)
T PRK05371 429 AAQDRKTGDYNDFWDD-RNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GGHVYPNNWQSI 506 (767)
T ss_pred hhhhhcCCCccHHHHh-CCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CCccCCCchhHH
Confidence 00000 00001112679999999999999999888877777663 35565555 578743 2346
Q ss_pred HHHHHHHHHHHhhcCCCCC
Q 020932 297 ELVSVVLDFVKASLKQDHP 315 (319)
Q Consensus 297 ~~~~~i~~fl~~~~~~~~~ 315 (319)
++.+.+.+||++++....+
T Consensus 507 d~~e~~~~Wfd~~LkG~~n 525 (767)
T PRK05371 507 DFRDTMNAWFTHKLLGIDN 525 (767)
T ss_pred HHHHHHHHHHHhccccCCC
Confidence 7889999999999876543
No 96
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.65 E-value=1.4e-14 Score=120.48 Aligned_cols=255 Identities=15% Similarity=0.169 Sum_probs=164.0
Q ss_pred ccccceEEEEEeCCCCceEEEEEEeC--CCceEEEEEccCCCCCCChhH----HHHHHHHHHcCceEEEEcCCCCCCCCC
Q 020932 56 NLAVKQQELVIPNKYGERLVGVLHDA--ESSEIVVLCHGFRSTKDDPSM----VNLAVALQNEGISAFRFDFAGNGESEG 129 (319)
Q Consensus 56 ~~~~~~~~~~~~~~dg~~l~~~~~~~--~~~~~vv~~hG~~~~~~~~~~----~~~~~~l~~~G~~v~~~d~~G~G~s~~ 129 (319)
..+++.|...+.+.||..+.....+. +++|+|++.||+.+++..|.. ..++=.|+++||+|+.-+.||.--|..
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~ 122 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRK 122 (403)
T ss_pred HcCCceEEEEEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchh
Confidence 35788999999999998777655543 578999999999998865222 456777899999999999999765542
Q ss_pred CC----------CCCChHHH-HhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC----ccEEEEEecccccc
Q 020932 130 SF----------QYGNYWRE-ADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND----IRTFVNVSGRYDLK 193 (319)
Q Consensus 130 ~~----------~~~~~~~~-~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~~~ 193 (319)
.. -..+++++ ..|+.+.|+++.+. +.++++.+|||.|+.....++...|+ |+.+++++|.....
T Consensus 123 h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 123 HKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK 202 (403)
T ss_pred hcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc
Confidence 11 12244444 46999999998776 67899999999999999999988875 99999999976333
Q ss_pred ---cchhhhhc--------------------h-H----HHHHhhh----------ccccccccCC-----Cc---cee--
Q 020932 194 ---GGIEDRLG--------------------K-D----YMEKIMQ----------DGFIDVKNKT-----GD---VEY-- 225 (319)
Q Consensus 194 ---~~~~~~~~--------------------~-~----~~~~~~~----------~~~~~~~~~~-----~~---~~~-- 225 (319)
........ . . +...+.. ..+....... .. ..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h 282 (403)
T KOG2624|consen 203 HIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAH 282 (403)
T ss_pred ccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhcc
Confidence 00000000 0 0 0000000 0000000000 00 000
Q ss_pred ---eeehhhHH---h-------------------hhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCe
Q 020932 226 ---RVTEESLM---D-------------------RLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHK 280 (319)
Q Consensus 226 ---~~~~~~~~---~-------------------~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~ 280 (319)
..+...+. . .+...........++++|+.+.+|++|.++.++..+.+...++++.
T Consensus 283 ~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~ 362 (403)
T KOG2624|consen 283 LPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSV 362 (403)
T ss_pred CCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhccccc
Confidence 00000000 0 0000001111112568999999999999999999998888887754
Q ss_pred EEE---ecCCCcc-C---cccHHHHHHHHHHHHHhhc
Q 020932 281 LHV---VEGANHG-Y---TNHQAELVSVVLDFVKASL 310 (319)
Q Consensus 281 ~~~---~~~~gH~-~---~~~~~~~~~~i~~fl~~~~ 310 (319)
... +++-.|. + .+-++++.+.|++.+++..
T Consensus 363 ~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 363 IKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred ccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 422 7889999 3 2457889999999998765
No 97
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.65 E-value=1.2e-14 Score=124.83 Aligned_cols=115 Identities=9% Similarity=0.024 Sum_probs=91.4
Q ss_pred EEEEEEeCC----CceEEEEEccCCCCCCChhH-----HHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHH
Q 020932 74 LVGVLHDAE----SSEIVVLCHGFRSTKDDPSM-----VNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLR 144 (319)
Q Consensus 74 l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~ 144 (319)
+..+.|.|. .+.+||+++.+.... +.+ +.+++.|.++||.|+++|+++-+... ...+++++++.+.
T Consensus 201 ~eLiqY~P~te~v~~~PLLIVPp~INK~--YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~---r~~~ldDYv~~i~ 275 (560)
T TIGR01839 201 LELIQYKPITEQQHARPLLVVPPQINKF--YIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH---REWGLSTYVDALK 275 (560)
T ss_pred eEEEEeCCCCCCcCCCcEEEechhhhhh--heeecCCcchHHHHHHHcCCeEEEEeCCCCChhh---cCCCHHHHHHHHH
Confidence 343445443 357899999998655 333 68999999999999999999866553 3346788888999
Q ss_pred HHHHHHHhC-CCceEEEEEEehhHHHHHH----HHhhcCC--ccEEEEEecccccc
Q 020932 145 AVVQYFCGA-NRAVGAILGHSKGGSVVLL----YASKYND--IRTFVNVSGRYDLK 193 (319)
Q Consensus 145 ~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~----~a~~~p~--v~~~v~~~~~~~~~ 193 (319)
++++.+++. +.++|.++|||+||.++.. +++++++ |++++++.++.++.
T Consensus 276 ~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 276 EAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred HHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 999999877 6778999999999999886 6777774 99999999988765
No 98
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.64 E-value=1.8e-14 Score=115.88 Aligned_cols=224 Identities=16% Similarity=0.179 Sum_probs=138.2
Q ss_pred CceEEEEEccCCCCCCChhHHHH-HHHHHHcCceEEEEcCCCCCCCCCCCCCC----Ch-------HHHHhHHHHHHHHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNL-AVALQNEGISAFRFDFAGNGESEGSFQYG----NY-------WREADDLRAVVQYF 150 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~-~~~l~~~G~~v~~~d~~G~G~s~~~~~~~----~~-------~~~~~d~~~~i~~l 150 (319)
.+|.+|.++|.|.+.- +.-..+ +..|.++|+..+.+..|.||...+..+.. +. ...+.+...+++|+
T Consensus 91 ~rp~~IhLagTGDh~f-~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl 169 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGF-WRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWL 169 (348)
T ss_pred CCceEEEecCCCccch-hhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHH
Confidence 5788999999998762 112344 88888889999999999999876543222 11 22357788999999
Q ss_pred HhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccccc---ccchh-hhhchHHHH-HhhhccccccccCCCcc-
Q 020932 151 CGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDL---KGGIE-DRLGKDYME-KIMQDGFIDVKNKTGDV- 223 (319)
Q Consensus 151 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~---~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~- 223 (319)
..++..++.+.|.||||.+|...|...|. +..+-++++.... ..++. .......+. .+....+.+........
T Consensus 170 ~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~~~~ 249 (348)
T PF09752_consen 170 EREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEEISDIPAQN 249 (348)
T ss_pred HhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhhhcccccCc
Confidence 99999999999999999999999999998 5555555543321 11111 111111111 10111111100000000
Q ss_pred --------eeeeehhhHHhhhcc--chhhhhhhc---cCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCcc
Q 020932 224 --------EYRVTEESLMDRLNT--NMHDACLQI---DMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHG 290 (319)
Q Consensus 224 --------~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 290 (319)
............... +........ .-.-.+.++.+++|..||.+....+.+..|++++..+++ ||.
T Consensus 250 ~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHV 328 (348)
T PF09752_consen 250 KSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHV 328 (348)
T ss_pred ccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcE
Confidence 000000010110000 000000101 113458899999999999999999999999999999986 999
Q ss_pred --CcccHHHHHHHHHHHHHh
Q 020932 291 --YTNHQAELVSVVLDFVKA 308 (319)
Q Consensus 291 --~~~~~~~~~~~i~~fl~~ 308 (319)
++.+.+.+.+.|.+-+++
T Consensus 329 sA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 329 SAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred EEeeechHHHHHHHHHHhhC
Confidence 457778888888877653
No 99
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.62 E-value=8.8e-14 Score=116.13 Aligned_cols=218 Identities=14% Similarity=0.179 Sum_probs=137.7
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEe
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 164 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 164 (319)
|+||++..+.+... .+.+.+++.|.. |+.|+..|+..-+..+......+++++++-+.++++.+ +.+ ++++|+|
T Consensus 103 ~pvLiV~Pl~g~~~-~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~---G~~-v~l~GvC 176 (406)
T TIGR01849 103 PAVLIVAPMSGHYA-TLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL---GPD-IHVIAVC 176 (406)
T ss_pred CcEEEEcCCchHHH-HHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh---CCC-CcEEEEc
Confidence 79999999987664 245788999998 99999999987776554445567888888888888777 666 9999999
Q ss_pred hhHHHHHHHHhhc-----CC-ccEEEEEecccccccc---hhhhh---chHHHHHhh-h--------------------c
Q 020932 165 KGGSVVLLYASKY-----ND-IRTFVNVSGRYDLKGG---IEDRL---GKDYMEKIM-Q--------------------D 211 (319)
Q Consensus 165 ~Gg~~a~~~a~~~-----p~-v~~~v~~~~~~~~~~~---~~~~~---~~~~~~~~~-~--------------------~ 211 (319)
+||..++.+++.. |. ++++++++++.+.... +.... .-.+.+... . .
T Consensus 177 qgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~ 256 (406)
T TIGR01849 177 QPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLA 256 (406)
T ss_pred hhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHH
Confidence 9999977665554 54 9999999998886542 11110 111111111 0 0
Q ss_pred cccccccCCC-ccee----e------------------------eehhhHHhhh----ccchhh---------hhhhccC
Q 020932 212 GFIDVKNKTG-DVEY----R------------------------VTEESLMDRL----NTNMHD---------ACLQIDM 249 (319)
Q Consensus 212 ~~~~~~~~~~-~~~~----~------------------------~~~~~~~~~~----~~~~~~---------~~~~~~~ 249 (319)
+|........ ...+ . ...+.+.+.+ ...... .....+|
T Consensus 257 ~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I 336 (406)
T TIGR01849 257 GFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAI 336 (406)
T ss_pred HHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHC
Confidence 0100000000 0000 0 0000000000 000000 0000256
Q ss_pred C-CcEEEEecCCCCccCcchHHHHHhhC---C--CCeEEEecCCCccCc----ccHHHHHHHHHHHHHh
Q 020932 250 E-CSVLTIHGSSDKIIPLQDAHEFDKII---P--NHKLHVVEGANHGYT----NHQAELVSVVLDFVKA 308 (319)
Q Consensus 250 ~-~P~l~i~g~~D~~~~~~~~~~~~~~~---~--~~~~~~~~~~gH~~~----~~~~~~~~~i~~fl~~ 308 (319)
+ +|+|.+.|++|.++|+++++.+.+.+ + +.+.+..+++||.-. .-+++++..|.+||.+
T Consensus 337 ~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 337 TRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred cccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 7 99999999999999999999998875 4 345677778999942 2347899999999976
No 100
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.62 E-value=1.3e-13 Score=96.83 Aligned_cols=183 Identities=19% Similarity=0.231 Sum_probs=121.5
Q ss_pred eCCC-ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC-----CCCCCCCChHHHHhHHHHHHHHHHhC
Q 020932 80 DAES-SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES-----EGSFQYGNYWREADDLRAVVQYFCGA 153 (319)
Q Consensus 80 ~~~~-~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s-----~~~~~~~~~~~~~~d~~~~i~~l~~~ 153 (319)
++++ ..+||+-||.|.+.++..+...+..|+.+|+.|..++++..-.. .+++...+. -......+..++..
T Consensus 9 pag~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~---~~~~~~~~aql~~~ 85 (213)
T COG3571 9 PAGPAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTL---NPEYIVAIAQLRAG 85 (213)
T ss_pred CCCCCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccC---CHHHHHHHHHHHhc
Confidence 4444 34788899999999988899999999999999999999864221 122222221 12222233333333
Q ss_pred -CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhh
Q 020932 154 -NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEES 231 (319)
Q Consensus 154 -~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (319)
...++++-|+||||.++..++..... |+++++++=++.......+. ..
T Consensus 86 l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~-Rt----------------------------- 135 (213)
T COG3571 86 LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQL-RT----------------------------- 135 (213)
T ss_pred ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccc-hh-----------------------------
Confidence 44579999999999999998877654 99999998655433221100 00
Q ss_pred HHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCcc-----------cHHHHHH
Q 020932 232 LMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTN-----------HQAELVS 300 (319)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----------~~~~~~~ 300 (319)
.....+++|+||.+|+.|.+-..+.+.. +......++++++++.|.+-. +-....+
T Consensus 136 ------------~HL~gl~tPtli~qGtrD~fGtr~~Va~-y~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~ 202 (213)
T COG3571 136 ------------EHLTGLKTPTLITQGTRDEFGTRDEVAG-YALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAE 202 (213)
T ss_pred ------------hhccCCCCCeEEeecccccccCHHHHHh-hhcCCceEEEEeccCccccccccccccccHHHHHHHHHH
Confidence 0001358999999999999977666532 233356899999999999521 1134567
Q ss_pred HHHHHHHh
Q 020932 301 VVLDFVKA 308 (319)
Q Consensus 301 ~i~~fl~~ 308 (319)
+|..|..+
T Consensus 203 ~va~~~~~ 210 (213)
T COG3571 203 QVAGWARR 210 (213)
T ss_pred HHHHHHhh
Confidence 77777765
No 101
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.60 E-value=1.7e-14 Score=121.72 Aligned_cols=108 Identities=16% Similarity=0.138 Sum_probs=83.4
Q ss_pred CceEEEEEccCCCCCCChhHH-HHHHHHHH--cCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC---CCc
Q 020932 83 SSEIVVLCHGFRSTKDDPSMV-NLAVALQN--EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NRA 156 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~-~~~~~l~~--~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~ 156 (319)
.+|++|++||++.+.....|. .+.+.|.. ..++|+++|++|+|.+............++++.+++++|... +.+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 568999999998764212344 36666542 259999999999998865543334456678889999988643 567
Q ss_pred eEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccc
Q 020932 157 VGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRY 190 (319)
Q Consensus 157 ~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 190 (319)
+++|+||||||.+|..++...|+ |.++++++|..
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 99999999999999999998887 99999999854
No 102
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.60 E-value=1.1e-13 Score=109.70 Aligned_cols=218 Identities=18% Similarity=0.256 Sum_probs=91.2
Q ss_pred CceEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCC----CCCCCCCCCCCCChHHHHhHHHHHHHHHHhC----
Q 020932 83 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFA----GNGESEGSFQYGNYWREADDLRAVVQYFCGA---- 153 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~----G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---- 153 (319)
...+||||.|++..... .+...+++.|...||.++-+.++ |+| ..+.+..++|+.++|++++..
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G-------~~SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWG-------TSSLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS--------S--HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcC-------cchhhhHHHHHHHHHHHHHHhhccc
Confidence 56689999999886643 56788999998889999999765 444 346788899999999999988
Q ss_pred -CCceEEEEEEehhHHHHHHHHhhcC------CccEEEEEecccccccchhhhhc----hH---HHHHhhhcccc-cccc
Q 020932 154 -NRAVGAILGHSKGGSVVLLYASKYN------DIRTFVNVSGRYDLKGGIEDRLG----KD---YMEKIMQDGFI-DVKN 218 (319)
Q Consensus 154 -~~~~i~l~G~S~Gg~~a~~~a~~~p------~v~~~v~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~-~~~~ 218 (319)
+.++|+|+|||-|+.-+++|+.... .|+++|+-+|..+.+......-. .. ....+...+-. ....
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILP 184 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG-
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceee
Confidence 4679999999999999999988752 29999999997765543221111 11 11122211111 1110
Q ss_pred -CCC-cc--eeeeehhhHHh---------hhccchhhh---hhhccCCCcEEEEecCCCCccCcch-HHHHHhhCCC---
Q 020932 219 -KTG-DV--EYRVTEESLMD---------RLNTNMHDA---CLQIDMECSVLTIHGSSDKIIPLQD-AHEFDKIIPN--- 278 (319)
Q Consensus 219 -~~~-~~--~~~~~~~~~~~---------~~~~~~~~~---~~~~~~~~P~l~i~g~~D~~~~~~~-~~~~~~~~~~--- 278 (319)
... .. ...++...+.. .++.+.... ...-.+++|+|++.+++|+.||... .+++.+++..
T Consensus 185 ~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~ 264 (303)
T PF08538_consen 185 REFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATN 264 (303)
T ss_dssp ---GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT--------------------
T ss_pred ccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccccccccccccc
Confidence 000 00 11222222222 222221111 1122568899999999999998643 2344444432
Q ss_pred -----CeEEEecCCCccCcccH-----HHHHHHHHHHHH
Q 020932 279 -----HKLHVVEGANHGYTNHQ-----AELVSVVLDFVK 307 (319)
Q Consensus 279 -----~~~~~~~~~gH~~~~~~-----~~~~~~i~~fl~ 307 (319)
..-.++||++|.+-... +.+.+.+..||+
T Consensus 265 ~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 265 PKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ---------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccCC
Confidence 12458999999975322 356777777764
No 103
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=7.7e-14 Score=112.31 Aligned_cols=235 Identities=16% Similarity=0.209 Sum_probs=134.7
Q ss_pred CceEEEEEEeC---CCceEEEEEccCCCCCCCh---------hHHHHH---HHHHHcCceEEEEcCCCCC-CCCCCC---
Q 020932 71 GERLVGVLHDA---ESSEIVVLCHGFRSTKDDP---------SMVNLA---VALQNEGISAFRFDFAGNG-ESEGSF--- 131 (319)
Q Consensus 71 g~~l~~~~~~~---~~~~~vv~~hG~~~~~~~~---------~~~~~~---~~l~~~G~~v~~~d~~G~G-~s~~~~--- 131 (319)
+..+.+..++. ....+||++|++.++.... .|..++ +.+-...|-||+.|-.|.. .|.++.
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 34455544432 2467999999999866321 233332 1122233889999999865 333322
Q ss_pred ----------CCCChHHHHhHHHHHHHHHHhCCCceEE-EEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccch---
Q 020932 132 ----------QYGNYWREADDLRAVVQYFCGANRAVGA-ILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI--- 196 (319)
Q Consensus 132 ----------~~~~~~~~~~d~~~~i~~l~~~~~~~i~-l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~--- 196 (319)
...++.+++.--..+++.| +++++. ++|.||||+.|+.++..+|+ |+.+|.+++........
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~L---GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~ 191 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDAL---GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAF 191 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhc---CcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHH
Confidence 1123344444444555555 899985 99999999999999999999 99999888744222100
Q ss_pred hhh-----------------------hchHHHHHhh----------hccccccccCCCcc--eeeeehhh--------HH
Q 020932 197 EDR-----------------------LGKDYMEKIM----------QDGFIDVKNKTGDV--EYRVTEES--------LM 233 (319)
Q Consensus 197 ~~~-----------------------~~~~~~~~~~----------~~~~~~~~~~~~~~--~~~~~~~~--------~~ 233 (319)
.+. -+-...+.+. ...+.......... ...+..+. +.
T Consensus 192 ~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~ 271 (368)
T COG2021 192 NEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFV 271 (368)
T ss_pred HHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHH
Confidence 000 0000000000 00010000000000 00011111 11
Q ss_pred hhhccchhh------------------hhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCe-EEEec-CCCcc-Cc
Q 020932 234 DRLNTNMHD------------------ACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHK-LHVVE-GANHG-YT 292 (319)
Q Consensus 234 ~~~~~~~~~------------------~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~-~~gH~-~~ 292 (319)
.++..+... ......+++|++++.-+.|.++|++..+++.+.++.+. +++++ ..||. ++
T Consensus 272 ~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL 351 (368)
T COG2021 272 ARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFL 351 (368)
T ss_pred hccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhh
Confidence 111111000 01112578999999999999999999999999998776 66664 67999 56
Q ss_pred ccHHHHHHHHHHHHHh
Q 020932 293 NHQAELVSVVLDFVKA 308 (319)
Q Consensus 293 ~~~~~~~~~i~~fl~~ 308 (319)
.+.+.+...|..||+.
T Consensus 352 ~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 352 VESEAVGPLIRKFLAL 367 (368)
T ss_pred cchhhhhHHHHHHhhc
Confidence 7778888999999864
No 104
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.58 E-value=2.8e-14 Score=115.94 Aligned_cols=133 Identities=17% Similarity=0.133 Sum_probs=87.1
Q ss_pred ccccceEEEEEeCCCCceEEEEEEeCC----CceEEEEEccCCCCCCC----------------hhHHHHHHHHHHcCce
Q 020932 56 NLAVKQQELVIPNKYGERLVGVLHDAE----SSEIVVLCHGFRSTKDD----------------PSMVNLAVALQNEGIS 115 (319)
Q Consensus 56 ~~~~~~~~~~~~~~dg~~l~~~~~~~~----~~~~vv~~hG~~~~~~~----------------~~~~~~~~~l~~~G~~ 115 (319)
..++..|++.|.+.++..+.+++..|. +-|+||++||-++..+. ..-..++..|+++||.
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 357888999999999999998877654 56899999998764411 0013467889999999
Q ss_pred EEEEcCCCCCCCCCCCCCC-----ChHHH---------------HhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHH
Q 020932 116 AFRFDFAGNGESEGSFQYG-----NYWRE---------------ADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLL 172 (319)
Q Consensus 116 v~~~d~~G~G~s~~~~~~~-----~~~~~---------------~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~ 172 (319)
|+++|.+|+|+........ +.... +-|...++++|.++ +.++|.++|+||||..++.
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 9999999999875432111 11111 24455688998877 6789999999999999999
Q ss_pred HHhhcCCccEEEEEec
Q 020932 173 YASKYNDIRTFVNVSG 188 (319)
Q Consensus 173 ~a~~~p~v~~~v~~~~ 188 (319)
+++..+.|++.|..+-
T Consensus 243 LaALDdRIka~v~~~~ 258 (390)
T PF12715_consen 243 LAALDDRIKATVANGY 258 (390)
T ss_dssp HHHH-TT--EEEEES-
T ss_pred HHHcchhhHhHhhhhh
Confidence 9999888988887654
No 105
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.56 E-value=2.6e-14 Score=115.52 Aligned_cols=109 Identities=14% Similarity=0.200 Sum_probs=81.1
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHH-HcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC---CCceE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQ-NEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NRAVG 158 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i 158 (319)
++|++|++||++++........+.+.+. ..+++|+++|+++++.+.......+.....+++..+++.+.+. +.+++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i 114 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENV 114 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHE
Confidence 5789999999999873322345555554 4579999999998743322111223344567888888888664 45789
Q ss_pred EEEEEehhHHHHHHHHhhcCC-ccEEEEEecccc
Q 020932 159 AILGHSKGGSVVLLYASKYND-IRTFVNVSGRYD 191 (319)
Q Consensus 159 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 191 (319)
+++||||||.+|..++.+.++ |+++++++|...
T Consensus 115 ~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 115 HLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred EEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 999999999999999999987 999999988654
No 106
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.55 E-value=3.3e-13 Score=99.29 Aligned_cols=179 Identities=17% Similarity=0.192 Sum_probs=122.5
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEEEEEE
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAILGH 163 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~ 163 (319)
..+|++.|=|+-. .+-..+++.|+++|+.|+.+|-+-+-.+. .+.++.+.|+.++|+...++ +.++++|+|+
T Consensus 3 t~~v~~SGDgGw~--~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~-----rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDGGWR--DLDKQIAEALAKQGVPVVGVDSLRYFWSE-----RTPEQTAADLARIIRHYRARWGRKRVVLIGY 75 (192)
T ss_pred EEEEEEeCCCCch--hhhHHHHHHHHHCCCeEEEechHHHHhhh-----CCHHHHHHHHHHHHHHHHHHhCCceEEEEee
Confidence 4578888887766 45688999999999999999976544433 34477799999999988877 8889999999
Q ss_pred ehhHHHHHHHHhhcCC-----ccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhcc
Q 020932 164 SKGGSVVLLYASKYND-----IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNT 238 (319)
Q Consensus 164 S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (319)
|+|+-+.-....+.|. |+.++++++..... +.+....+...-..
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~d-------------------------------Feihv~~wlg~~~~ 124 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPSTTAD-------------------------------FEIHVSGWLGMGGD 124 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCCcce-------------------------------EEEEhhhhcCCCCC
Confidence 9999887777776663 89999998843211 11111111111111
Q ss_pred c----hhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCcccHHHHHHHHHHHHHh
Q 020932 239 N----MHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVKA 308 (319)
Q Consensus 239 ~----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 308 (319)
+ ......... ..|+++|+|++|.-.... .+ ..++.+.+.+|| ||.+-.+.+.+.+.|++-+++
T Consensus 125 ~~~~~~~pei~~l~-~~~v~CiyG~~E~d~~cp---~l--~~~~~~~i~lpG-gHHfd~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 125 DAAYPVIPEIAKLP-PAPVQCIYGEDEDDSLCP---SL--RQPGVEVIALPG-GHHFDGDYDALAKRILDALKA 191 (192)
T ss_pred cccCCchHHHHhCC-CCeEEEEEcCCCCCCcCc---cc--cCCCcEEEEcCC-CcCCCCCHHHHHHHHHHHHhc
Confidence 1 111111111 469999999987652211 12 125789999996 777777788888888887764
No 107
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.55 E-value=4.5e-14 Score=90.45 Aligned_cols=76 Identities=30% Similarity=0.498 Sum_probs=65.1
Q ss_pred CceEEEEEEeCC-C-ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC-CCCChHHHHhHHHHHH
Q 020932 71 GERLVGVLHDAE-S-SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNYWREADDLRAVV 147 (319)
Q Consensus 71 g~~l~~~~~~~~-~-~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~d~~~~i 147 (319)
|.+|.+..+.|. + +.+|+++||++.++ ..|..+++.|+++||.|+++|+||||.|.+.. ...+++++++|+..++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~--~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHS--GRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHH--HHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 567888777665 3 78999999999998 56999999999999999999999999999866 4468889999998876
Q ss_pred H
Q 020932 148 Q 148 (319)
Q Consensus 148 ~ 148 (319)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 4
No 108
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.54 E-value=1.6e-13 Score=107.81 Aligned_cols=236 Identities=15% Similarity=0.223 Sum_probs=130.4
Q ss_pred EEeCCCCceEEEEEEeCC--CceEEEEEccCCCCCCChhHH-----HHHHHHHHcCceEEEEcCCCCCCCCCC----CCC
Q 020932 65 VIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMV-----NLAVALQNEGISAFRFDFAGNGESEGS----FQY 133 (319)
Q Consensus 65 ~~~~~dg~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~-----~~~~~l~~~G~~v~~~d~~G~G~s~~~----~~~ 133 (319)
.++++-| .+++..++.. ++|++|-.|..|.+..+ .+. +-.+.+.++ +.++-+|.||+..-... ..+
T Consensus 3 ~v~t~~G-~v~V~v~G~~~~~kp~ilT~HDvGlNh~s-cF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~y 79 (283)
T PF03096_consen 3 DVETPYG-SVHVTVQGDPKGNKPAILTYHDVGLNHKS-CFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQY 79 (283)
T ss_dssp EEEETTE-EEEEEEESS--TTS-EEEEE--TT--HHH-HCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT---
T ss_pred eeccCce-EEEEEEEecCCCCCceEEEeccccccchH-HHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccc
Confidence 4555545 6777777665 49999999999987742 122 234555555 99999999999664332 235
Q ss_pred CChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchh---hhhc--------
Q 020932 134 GNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIE---DRLG-------- 201 (319)
Q Consensus 134 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~---~~~~-------- 201 (319)
.+.+++++++..+++++ +.+.++.+|-..||++..++|..+|+ |.++|++++......... ..+.
T Consensus 80 Psmd~LAe~l~~Vl~~f---~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~g 156 (283)
T PF03096_consen 80 PSMDQLAEMLPEVLDHF---GLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYG 156 (283)
T ss_dssp --HHHHHCTHHHHHHHH---T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------C
T ss_pred cCHHHHHHHHHHHHHhC---CccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccc
Confidence 68899999999999999 88899999999999999999999999 999999998654332211 1110
Q ss_pred --hHHHHHhhhccccccccCCCcc---------eeeeehhhHHhhh---ccchhhhhhhccCCCcEEEEecCCCCccCcc
Q 020932 202 --KDYMEKIMQDGFIDVKNKTGDV---------EYRVTEESLMDRL---NTNMHDACLQIDMECSVLTIHGSSDKIIPLQ 267 (319)
Q Consensus 202 --~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~ 267 (319)
....+.+....|-......... .....+..+...+ ..............||+|++.|+..+.. +
T Consensus 157 mt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~ 234 (283)
T PF03096_consen 157 MTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHV--D 234 (283)
T ss_dssp TTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTH--H
T ss_pred cccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcch--h
Confidence 0011111111010000000000 0001111111111 1111111112244799999999998774 6
Q ss_pred hHHHHHhhCC--CCeEEEecCCCccCc-ccHHHHHHHHHHHHHh
Q 020932 268 DAHEFDKIIP--NHKLHVVEGANHGYT-NHQAELVSVVLDFVKA 308 (319)
Q Consensus 268 ~~~~~~~~~~--~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 308 (319)
.+.++..++. +.++..++++|=..+ ++|.++.+.+.-||+-
T Consensus 235 ~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 235 DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 6677777763 468999999977765 6788999999999874
No 109
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.53 E-value=3.9e-14 Score=110.99 Aligned_cols=99 Identities=20% Similarity=0.248 Sum_probs=73.0
Q ss_pred EEEEccCCCCCCC-hhHHHHHHHHHH-cCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC------CCceE
Q 020932 87 VVLCHGFRSTKDD-PSMVNLAVALQN-EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA------NRAVG 158 (319)
Q Consensus 87 vv~~hG~~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~------~~~~i 158 (319)
||++||.+..... .....++..++. .|+.|+.+|+|=. ....+....+|+.++++|+.++ +.++|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~-------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA-------PEAPFPAALEDVKAAYRWLLKNADKLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T-------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc-------ccccccccccccccceeeeccccccccccccce
Confidence 7999999865422 224556666665 7999999999932 2345678899999999999876 46689
Q ss_pred EEEEEehhHHHHHHHHhhc-----CCccEEEEEeccccc
Q 020932 159 AILGHSKGGSVVLLYASKY-----NDIRTFVNVSGRYDL 192 (319)
Q Consensus 159 ~l~G~S~Gg~~a~~~a~~~-----p~v~~~v~~~~~~~~ 192 (319)
+++|+|.||.+++.++... +.++++++++|..+.
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999988753 228999999997765
No 110
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.52 E-value=4.2e-13 Score=105.75 Aligned_cols=204 Identities=20% Similarity=0.351 Sum_probs=124.7
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHH-HcCce--E--EEEcCCCC----CCCCC-----------CCCC-CChHHHHh
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQ-NEGIS--A--FRFDFAGN----GESEG-----------SFQY-GNYWREAD 141 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~-~~G~~--v--~~~d~~G~----G~s~~-----------~~~~-~~~~~~~~ 141 (319)
...|.||+||++++..+ +..++..+. ++|.. + +.++--|. |.-.. .... .++...++
T Consensus 10 ~~tPTifihG~~gt~~s--~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~ 87 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANS--FNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAK 87 (255)
T ss_dssp S-EEEEEE--TTGGCCC--CHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHH
T ss_pred CCCcEEEECCCCCChhH--HHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHH
Confidence 45689999999999854 788999997 66543 3 33444332 22111 1112 35677899
Q ss_pred HHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhc------CCccEEEEEecccccccchhhhhchHHHHHhhhcccc
Q 020932 142 DLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKY------NDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFI 214 (319)
Q Consensus 142 d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~------p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (319)
.+..++.+|.++ +.+++.+|||||||..++.++..+ |.+..+|.++++++........... ..+...
T Consensus 88 wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~---~~~~~~--- 161 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQ---NDLNKN--- 161 (255)
T ss_dssp HHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTT---T-CSTT---
T ss_pred HHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchh---hhhccc---
Confidence 999999999998 889999999999999999998875 4489999999988754332111000 000000
Q ss_pred ccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecC------CCCccCcchHHHHHhhCCC----CeEEEe
Q 020932 215 DVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGS------SDKIIPLQDAHEFDKIIPN----HKLHVV 284 (319)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~------~D~~~~~~~~~~~~~~~~~----~~~~~~ 284 (319)
+ .......+...+.. . .....-.+.+|-|.|. .|..||...++.+...+.+ .+-.++
T Consensus 162 ------g---p~~~~~~y~~l~~~-~---~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v 228 (255)
T PF06028_consen 162 ------G---PKSMTPMYQDLLKN-R---RKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTV 228 (255)
T ss_dssp ----------BSS--HHHHHHHHT-H---GGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEE
T ss_pred ------C---CcccCHHHHHHHHH-H---HhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEE
Confidence 0 00011111111111 0 0112336789999999 8999999988888777754 344555
Q ss_pred c--CCCccCcccHHHHHHHHHHHHH
Q 020932 285 E--GANHGYTNHQAELVSVVLDFVK 307 (319)
Q Consensus 285 ~--~~gH~~~~~~~~~~~~i~~fl~ 307 (319)
. ++.|.-+.+.+++.+.|.+||-
T Consensus 229 ~G~~a~HS~LheN~~V~~~I~~FLw 253 (255)
T PF06028_consen 229 TGKDAQHSQLHENPQVDKLIIQFLW 253 (255)
T ss_dssp ESGGGSCCGGGCCHHHHHHHHHHHC
T ss_pred ECCCCccccCCCCHHHHHHHHHHhc
Confidence 4 4689976677899999999983
No 111
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.52 E-value=4.5e-12 Score=98.36 Aligned_cols=240 Identities=13% Similarity=0.180 Sum_probs=153.0
Q ss_pred eEEEEEeCCCCceEEEEEEeCC--CceEEEEEccCCCCCCChhHH-----HHHHHHHHcCceEEEEcCCCCCCCCCC---
Q 020932 61 QQELVIPNKYGERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMV-----NLAVALQNEGISAFRFDFAGNGESEGS--- 130 (319)
Q Consensus 61 ~~~~~~~~~dg~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~-----~~~~~l~~~G~~v~~~d~~G~G~s~~~--- 130 (319)
.++..+.+..| .+++..++.. ++|++|-.|..|.+..+ .+. +-+..+..+ |.++-+|-||+-.....
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~~kpaiiTyhDlglN~~s-cFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~ 98 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKGNKPAIITYHDLGLNHKS-CFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPE 98 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCCCCceEEEecccccchHh-HhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCC
Confidence 56667777666 4666666543 58999999999998853 232 335566777 99999999998544322
Q ss_pred -CCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccch---hhhhchHHH
Q 020932 131 -FQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGI---EDRLGKDYM 205 (319)
Q Consensus 131 -~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~---~~~~~~~~~ 205 (319)
..+.+.++.++++..+++++ +.+.|+-+|...|+++..++|..+|+ |-++|++++......++ ...+...++
T Consensus 99 ~y~yPsmd~LAd~l~~VL~~f---~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l 175 (326)
T KOG2931|consen 99 GYPYPSMDDLADMLPEVLDHF---GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLL 175 (326)
T ss_pred CCCCCCHHHHHHHHHHHHHhc---CcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHH
Confidence 23568899999999999999 88889999999999999999999999 99999998755433222 222111111
Q ss_pred ----------HHhhhccccccccCCCc---------ceeeeehhh---HHhhhccchhhhhhhc----cCCCcEEEEecC
Q 020932 206 ----------EKIMQDGFIDVKNKTGD---------VEYRVTEES---LMDRLNTNMHDACLQI----DMECSVLTIHGS 259 (319)
Q Consensus 206 ----------~~~~~~~~~~~~~~~~~---------~~~~~~~~~---~~~~~~~~~~~~~~~~----~~~~P~l~i~g~ 259 (319)
+.+....|-........ ......+.. +.+.+........... .++||+|++.|+
T Consensus 176 ~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd 255 (326)
T KOG2931|consen 176 YYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGD 255 (326)
T ss_pred HhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecC
Confidence 11111111100000000 000111111 1111111111111111 346999999999
Q ss_pred CCCccCcchHHHHHhhCC--CCeEEEecCCCccCcc-cHHHHHHHHHHHHHh
Q 020932 260 SDKIIPLQDAHEFDKIIP--NHKLHVVEGANHGYTN-HQAELVSVVLDFVKA 308 (319)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-~~~~~~~~i~~fl~~ 308 (319)
+.+.+ +.+.+....+- +.++..+.++|-...+ .|..+.+.+.-|++-
T Consensus 256 ~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 256 NSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred CCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 88775 45556655552 5788999999999876 788999999988874
No 112
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.52 E-value=1.4e-13 Score=109.28 Aligned_cols=211 Identities=13% Similarity=0.165 Sum_probs=124.5
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEe
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 164 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 164 (319)
++|+++|+.+++. ..|..+++.|...++.|+.++.+|.+ .......++++++++..+.|...... .++.|+|||
T Consensus 1 ~~lf~~p~~gG~~--~~y~~la~~l~~~~~~v~~i~~~~~~--~~~~~~~si~~la~~y~~~I~~~~~~--gp~~L~G~S 74 (229)
T PF00975_consen 1 RPLFCFPPAGGSA--SSYRPLARALPDDVIGVYGIEYPGRG--DDEPPPDSIEELASRYAEAIRARQPE--GPYVLAGWS 74 (229)
T ss_dssp -EEEEESSTTCSG--GGGHHHHHHHTTTEEEEEEECSTTSC--TTSHEESSHHHHHHHHHHHHHHHTSS--SSEEEEEET
T ss_pred CeEEEEcCCccCH--HHHHHHHHhCCCCeEEEEEEecCCCC--CCCCCCCCHHHHHHHHHHHhhhhCCC--CCeeehccC
Confidence 4799999999988 67999999998755899999999998 22333457788888777777665322 389999999
Q ss_pred hhHHHHHHHHhhcC---C-ccEEEEEecccccccc--hhhhhchH-HHHHhhhccccccccCCCcceeeeehhhHHhhhc
Q 020932 165 KGGSVVLLYASKYN---D-IRTFVNVSGRYDLKGG--IEDRLGKD-YMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLN 237 (319)
Q Consensus 165 ~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (319)
+||.+|+.+|.+.. . +..+++++++...... ........ +...+............... ....+...+.
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 150 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEE----LLARLLRALR 150 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHH----HHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHH----HHHHHHHHHH
Confidence 99999999988652 2 8999999965443211 11111111 22222211111000000000 0001111111
Q ss_pred cchhhh----hhhc-cCCCcEEEEecCCCCccCcc---hHHHHHhhCCC-CeEEEecCCCccCccc--HHHHHHHHHHHH
Q 020932 238 TNMHDA----CLQI-DMECSVLTIHGSSDKIIPLQ---DAHEFDKIIPN-HKLHVVEGANHGYTNH--QAELVSVVLDFV 306 (319)
Q Consensus 238 ~~~~~~----~~~~-~~~~P~l~i~g~~D~~~~~~---~~~~~~~~~~~-~~~~~~~~~gH~~~~~--~~~~~~~i~~fl 306 (319)
...... .... ...+|.++.....|...... ....+.+...+ .+++.++| +|+.+.. ..++.+.|.+||
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 151 DDFQALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp HHHHHHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETTGHHSTTHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCcEecchHHHHHHHHHhccC
Confidence 000000 0000 01457888989888887655 23346666654 57888885 9996543 567777777765
No 113
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=8.2e-13 Score=120.08 Aligned_cols=229 Identities=19% Similarity=0.221 Sum_probs=147.6
Q ss_pred ceEEEEEeCCCCceEEEEEEeCC------CceEEEEEccCCCCCC--ChhHHHHHH-HHHHcCceEEEEcCCCCCCCCCC
Q 020932 60 KQQELVIPNKYGERLVGVLHDAE------SSEIVVLCHGFRSTKD--DPSMVNLAV-ALQNEGISAFRFDFAGNGESEGS 130 (319)
Q Consensus 60 ~~~~~~~~~~dg~~l~~~~~~~~------~~~~vv~~hG~~~~~~--~~~~~~~~~-~l~~~G~~v~~~d~~G~G~s~~~ 130 (319)
..+.+.+ ||....+.+..|. +-|.+|.+||..++.. ...-..+.. .....|+.|+.+|.||.|.....
T Consensus 499 ~~~~i~~---~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~ 575 (755)
T KOG2100|consen 499 EFGKIEI---DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWD 575 (755)
T ss_pred eeEEEEe---ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchh
Confidence 4444554 6888887776653 3478888899886321 011122333 35667999999999998766543
Q ss_pred CCCC---C-hHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCC--ccEEEEEecccccccchhhhhc
Q 020932 131 FQYG---N-YWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND--IRTFVNVSGRYDLKGGIEDRLG 201 (319)
Q Consensus 131 ~~~~---~-~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~~~~~ 201 (319)
.... . -...++|...+++++.+. +.++|.++|+|.||++++.++...++ +++.+.++|..++. .......
T Consensus 576 ~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~t 654 (755)
T KOG2100|consen 576 FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYT 654 (755)
T ss_pred HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eeccccc
Confidence 2110 0 123467777777777666 67899999999999999999999984 77779999987764 2211111
Q ss_pred hHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCc-EEEEecCCCCccCcchHHHHHhhCC---
Q 020932 202 KDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECS-VLTIHGSSDKIIPLQDAHEFDKIIP--- 277 (319)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~--- 277 (319)
..++ +. .. ................ .++.| .|++||+.|..|+.+++..+.+.+.
T Consensus 655 erym------g~---p~-----------~~~~~y~e~~~~~~~~--~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~g 712 (755)
T KOG2100|consen 655 ERYM------GL---PS-----------ENDKGYEESSVSSPAN--NIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAG 712 (755)
T ss_pred Hhhc------CC---Cc-----------cccchhhhccccchhh--hhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCC
Confidence 1110 00 00 0000000000011111 22444 5999999999999999988887764
Q ss_pred -CCeEEEecCCCccCcccH--HHHHHHHHHHHHhhcCCCC
Q 020932 278 -NHKLHVVEGANHGYTNHQ--AELVSVVLDFVKASLKQDH 314 (319)
Q Consensus 278 -~~~~~~~~~~gH~~~~~~--~~~~~~i~~fl~~~~~~~~ 314 (319)
..++.++|+.+|.+.... ..+...+..|+...+....
T Consensus 713 v~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~~~~~~~ 752 (755)
T KOG2100|consen 713 VPFRLLVYPDENHGISYVEVISHLYEKLDRFLRDCFGSPV 752 (755)
T ss_pred CceEEEEeCCCCcccccccchHHHHHHHHHHHHHHcCccc
Confidence 268899999999986543 7789999999997765543
No 114
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.2e-12 Score=111.46 Aligned_cols=226 Identities=14% Similarity=0.144 Sum_probs=140.1
Q ss_pred cceEEEEEeCCCCceEEEEEEeCC------CceEEEEEccCCCCC---CChhH--HHHHHHHHHcCceEEEEcCCCCCCC
Q 020932 59 VKQQELVIPNKYGERLVGVLHDAE------SSEIVVLCHGFRSTK---DDPSM--VNLAVALQNEGISAFRFDFAGNGES 127 (319)
Q Consensus 59 ~~~~~~~~~~~dg~~l~~~~~~~~------~~~~vv~~hG~~~~~---~~~~~--~~~~~~l~~~G~~v~~~d~~G~G~s 127 (319)
.+.|-+.+.+..|..+.+..+.|. +-|+++++-|..+.- .++.+ .--...|+..||.|+++|-||.-..
T Consensus 611 ~p~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hR 690 (867)
T KOG2281|consen 611 VPPEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHR 690 (867)
T ss_pred CChhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCcccc
Confidence 344778888888899999888663 468999999987533 11222 1224568889999999999986433
Q ss_pred CCC--------CCCCChHHHHhHHHHHHHHHHhC----CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccccccc
Q 020932 128 EGS--------FQYGNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKG 194 (319)
Q Consensus 128 ~~~--------~~~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~ 194 (319)
... ..... ++|-.+.+++|.++ +.++|.+-|||+||++++..+.++|+ ++..|.-+|..++ .
T Consensus 691 GlkFE~~ik~kmGqVE----~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W-~ 765 (867)
T KOG2281|consen 691 GLKFESHIKKKMGQVE----VEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDW-R 765 (867)
T ss_pred chhhHHHHhhccCeee----ehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceee-e
Confidence 211 11122 34444455555444 67899999999999999999999999 5555544443332 2
Q ss_pred chhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHh
Q 020932 195 GIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDK 274 (319)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 274 (319)
........+ +...+..+......-......+.+. .-....|++||--|..|...+...+..
T Consensus 766 ~YDTgYTER---------YMg~P~~nE~gY~agSV~~~Veklp----------depnRLlLvHGliDENVHF~Hts~Lvs 826 (867)
T KOG2281|consen 766 LYDTGYTER---------YMGYPDNNEHGYGAGSVAGHVEKLP----------DEPNRLLLVHGLIDENVHFAHTSRLVS 826 (867)
T ss_pred eecccchhh---------hcCCCccchhcccchhHHHHHhhCC----------CCCceEEEEecccccchhhhhHHHHHH
Confidence 211111111 1111111111111111111111111 114469999999999999888777665
Q ss_pred hC----CCCeEEEecCCCccCc--ccHHHHHHHHHHHHHh
Q 020932 275 II----PNHKLHVVEGANHGYT--NHQAELVSVVLDFVKA 308 (319)
Q Consensus 275 ~~----~~~~~~~~~~~gH~~~--~~~~~~~~~i~~fl~~ 308 (319)
.+ +..++++||+.-|.+- +...-+...+..|+++
T Consensus 827 ~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 827 ALVKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred HHHhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 54 4569999999999973 4456677888899875
No 115
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.49 E-value=4e-12 Score=99.15 Aligned_cols=100 Identities=18% Similarity=0.234 Sum_probs=79.3
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC--------
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-------- 153 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-------- 153 (319)
+.-|+|||+||+.... ..|..+.+.++++||.|+.+|+...+.. .-....+++.++++|+.+.
T Consensus 15 g~yPVv~f~~G~~~~~--s~Ys~ll~hvAShGyIVV~~d~~~~~~~-------~~~~~~~~~~~vi~Wl~~~L~~~l~~~ 85 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLIN--SWYSQLLEHVASHGYIVVAPDLYSIGGP-------DDTDEVASAAEVIDWLAKGLESKLPLG 85 (259)
T ss_pred CCcCEEEEeCCcCCCH--HHHHHHHHHHHhCceEEEEecccccCCC-------CcchhHHHHHHHHHHHHhcchhhcccc
Confidence 4679999999999655 5699999999999999999996653221 1134467778888887653
Q ss_pred ---CCceEEEEEEehhHHHHHHHHhhc-----CC-ccEEEEEeccc
Q 020932 154 ---NRAVGAILGHSKGGSVVLLYASKY-----ND-IRTFVNVSGRY 190 (319)
Q Consensus 154 ---~~~~i~l~G~S~Gg~~a~~~a~~~-----p~-v~~~v~~~~~~ 190 (319)
+..++.|.|||-||-+|..++..+ +. ++++|+++|.-
T Consensus 86 v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 86 VKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 455899999999999999988886 23 99999999855
No 116
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.49 E-value=1.1e-11 Score=103.07 Aligned_cols=213 Identities=15% Similarity=0.141 Sum_probs=128.1
Q ss_pred CceEEEEEEeC--C---CceEEEEEccCCCCCCC--hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHH
Q 020932 71 GERLVGVLHDA--E---SSEIVVLCHGFRSTKDD--PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDL 143 (319)
Q Consensus 71 g~~l~~~~~~~--~---~~~~vv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~ 143 (319)
+..+.+..+.| . +.|+||++||.+-.... .....+...+...|+.|+.+|||-. ....+....+|+
T Consensus 61 ~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrla-------Pe~~~p~~~~d~ 133 (312)
T COG0657 61 GDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLA-------PEHPFPAALEDA 133 (312)
T ss_pred CCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCC-------CCCCCCchHHHH
Confidence 43345555554 2 47899999998755432 2234555666778999999999832 223556668889
Q ss_pred HHHHHHHHhC------CCceEEEEEEehhHHHHHHHHhhcC-----CccEEEEEecccccccchhhh---------hchH
Q 020932 144 RAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKYN-----DIRTFVNVSGRYDLKGGIEDR---------LGKD 203 (319)
Q Consensus 144 ~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~~~~~~~~~~~---------~~~~ 203 (319)
.++++|+.++ +.++|.+.|+|.||.+++.++.... ...+.++++|..+... .... +...
T Consensus 134 ~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~~~~~~~~~ 212 (312)
T COG0657 134 YAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYGEADLLDAA 212 (312)
T ss_pred HHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcCCccccCHH
Confidence 9999998866 3788999999999999998876543 3799999999877654 1100 1111
Q ss_pred HHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHH----hhCCCC
Q 020932 204 YMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFD----KIIPNH 279 (319)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~----~~~~~~ 279 (319)
.........+......... .....+.... ... -.|+++++|+.|.+.+ +.+.+. +.-..+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~--------p~~spl~~~~-----~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~ 276 (312)
T COG0657 213 AILAWFADLYLGAAPDRED--------PEASPLASDD-----LSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPV 276 (312)
T ss_pred HHHHHHHHHhCcCccccCC--------CccCcccccc-----ccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeE
Confidence 1111111111100000000 0000000000 011 3689999999999987 444444 443457
Q ss_pred eEEEecCCCccCc--cc--HHHHHHHHHHHHH
Q 020932 280 KLHVVEGANHGYT--NH--QAELVSVVLDFVK 307 (319)
Q Consensus 280 ~~~~~~~~gH~~~--~~--~~~~~~~i~~fl~ 307 (319)
+++.+++..|.+. .. ..+....+.+|+.
T Consensus 277 ~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 277 ELRVYPGMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred EEEEeCCcceeccccCcHHHHHHHHHHHHHHH
Confidence 8999999999873 22 2334556666666
No 117
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.47 E-value=5.8e-13 Score=103.48 Aligned_cols=169 Identities=21% Similarity=0.223 Sum_probs=85.7
Q ss_pred hHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchH-HHHHhhhcccccc
Q 020932 141 DDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKD-YMEKIMQDGFIDV 216 (319)
Q Consensus 141 ~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 216 (319)
+-+..+++||.++ +.++|.|+|.|.||-+|+.+|..+|+|+++|.++|............... .+..+........
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 83 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKFS 83 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE--EE----B-GGG-E
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCCCccCCcCCcChhhce
Confidence 4467888999887 44689999999999999999999999999999998765443322111100 0000000000000
Q ss_pred ccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHH-HHHhhC-----C-CCeEEEecCCCc
Q 020932 217 KNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAH-EFDKII-----P-NHKLHVVEGANH 289 (319)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~-~~~~~~-----~-~~~~~~~~~~gH 289 (319)
.................... .........++++|+|+|.|++|.+.|..... .+.+++ + +.+.+.|+++||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~--~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH 161 (213)
T PF08840_consen 84 WNEPGLLRSRYAFELADDKA--VEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGH 161 (213)
T ss_dssp E-TTS-EE-TT-B--TTTGG--GCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S
T ss_pred ecCCcceehhhhhhcccccc--cccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCc
Confidence 00000000000000000000 01111222367999999999999999865443 333322 2 468899999999
Q ss_pred cCc---c--------------------------cHHHHHHHHHHHHHhhcC
Q 020932 290 GYT---N--------------------------HQAELVSVVLDFVKASLK 311 (319)
Q Consensus 290 ~~~---~--------------------------~~~~~~~~i~~fl~~~~~ 311 (319)
.+. . ...+.++.+++||++++.
T Consensus 162 ~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 162 LIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp ---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred eecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 941 0 124679999999999875
No 118
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.45 E-value=1.1e-12 Score=101.00 Aligned_cols=171 Identities=18% Similarity=0.187 Sum_probs=98.5
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHH-cCceEEEEcCCCCCCCCCCCC-----CCChHHHHhHHHHHHHHHHhC---
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQN-EGISAFRFDFAGNGESEGSFQ-----YGNYWREADDLRAVVQYFCGA--- 153 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~d~~~~i~~l~~~--- 153 (319)
+.|.||++||.+++.+.+.-..-...|++ +||.|+.++............ ...-......+.++++++..+
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 45899999999998843111111234554 489999888542211111000 001122356677888887766
Q ss_pred CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhH
Q 020932 154 NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESL 232 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (319)
+.++|++.|+|.||.++..++..+|+ +.++..+++....... .... ....+. .+... ......
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~--~~~~--a~~~m~-~g~~~-----------~p~~~~ 158 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAA--SGAS--ALSAMR-SGPRP-----------APAAAW 158 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccccccc--Cccc--HHHHhh-CCCCC-----------ChHHHH
Confidence 77899999999999999999999999 8888777764322111 0000 011110 00000 000000
Q ss_pred HhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhC
Q 020932 233 MDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII 276 (319)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~ 276 (319)
....... . ....|++++||+.|..|.+....++.+.+
T Consensus 159 ~a~~~~g------~-~~~~P~~v~hG~~D~tV~~~n~~~~~~q~ 195 (220)
T PF10503_consen 159 GARSDAG------A-YPGYPRIVFHGTADTTVNPQNADQLVAQW 195 (220)
T ss_pred Hhhhhcc------C-CCCCCEEEEecCCCCccCcchHHHHHHHH
Confidence 0000000 0 11469999999999999998888776654
No 119
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.45 E-value=9.8e-13 Score=117.93 Aligned_cols=110 Identities=18% Similarity=0.250 Sum_probs=83.9
Q ss_pred EEeCCCCceEEEEEEeC---------CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-----
Q 020932 65 VIPNKYGERLVGVLHDA---------ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS----- 130 (319)
Q Consensus 65 ~~~~~dg~~l~~~~~~~---------~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~----- 130 (319)
.+...++.++.+..... +..|+||++||++++. ..|..+++.|.++||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~--~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~ 498 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAK--ENALAFAGTLAAAGVATIAIDHPLHGARSFDANASG 498 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCH--HHHHHHHHHHHhCCcEEEEeCCCCCCcccccccccc
Confidence 44445666665443221 1346899999999999 4689999999999999999999999999432
Q ss_pred -----CC-------------CCChHHHHhHHHHHHHHHH------h-------CCCceEEEEEEehhHHHHHHHHhh
Q 020932 131 -----FQ-------------YGNYWREADDLRAVVQYFC------G-------ANRAVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 131 -----~~-------------~~~~~~~~~d~~~~i~~l~------~-------~~~~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
.. ..++.+.+.|+..+...+. . .+..+++++||||||.++..++..
T Consensus 499 ~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 499 VNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 11 1256788899999888886 1 134689999999999999999875
No 120
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.43 E-value=2.6e-11 Score=99.23 Aligned_cols=233 Identities=15% Similarity=0.160 Sum_probs=131.3
Q ss_pred cccceEEEEEeCCCCceEEEEEEeCC------CceEEEEEccCCCCCC---ChhHHHHHHHHHHc-CceEEEEcCCCCCC
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDAE------SSEIVVLCHGFRSTKD---DPSMVNLAVALQNE-GISAFRFDFAGNGE 126 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~~------~~~~vv~~hG~~~~~~---~~~~~~~~~~l~~~-G~~v~~~d~~G~G~ 126 (319)
.++...++.+....+ +..++|.|. ..|.||++||.|.... ...+..+...++.. +..|+.+|||=.-+
T Consensus 59 ~~v~~~dv~~~~~~~--l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPE 136 (336)
T KOG1515|consen 59 NGVTSKDVTIDPFTN--LPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPE 136 (336)
T ss_pred cCceeeeeEecCCCC--eEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCC
Confidence 445556666665444 555566543 4689999999985432 24677777777444 78899999983221
Q ss_pred CCCCCCCCChHHHHhHHHHHHHHHHhC-------CCceEEEEEEehhHHHHHHHHhhc-------CCccEEEEEeccccc
Q 020932 127 SEGSFQYGNYWREADDLRAVVQYFCGA-------NRAVGAILGHSKGGSVVLLYASKY-------NDIRTFVNVSGRYDL 192 (319)
Q Consensus 127 s~~~~~~~~~~~~~~d~~~~i~~l~~~-------~~~~i~l~G~S~Gg~~a~~~a~~~-------p~v~~~v~~~~~~~~ 192 (319)
. .+....+|..+++.|+.++ +.++|+|.|-|.||.+|..+|.+. +.+++.|++.|.+..
T Consensus 137 ---h----~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 137 ---H----PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred ---C----CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 1 2223345555555555442 778999999999999998877653 239999999998765
Q ss_pred ccchhhhh----------chHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCC
Q 020932 193 KGGIEDRL----------GKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDK 262 (319)
Q Consensus 193 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 262 (319)
........ .......+.......... .. ...+..-... ..........-.|+|++.++.|.
T Consensus 210 ~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~--~~------~~p~~np~~~-~~~~d~~~~~lp~tlv~~ag~D~ 280 (336)
T KOG1515|consen 210 TDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKT--DL------DHPFINPVGN-SLAKDLSGLGLPPTLVVVAGYDV 280 (336)
T ss_pred CCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCC--Cc------CCcccccccc-ccccCccccCCCceEEEEeCchh
Confidence 44332210 000111111100000000 00 0000000000 00000001113459999999998
Q ss_pred ccCcchHHHHHhhC----CCCeEEEecCCCccCc---c---cHHHHHHHHHHHHHhh
Q 020932 263 IIPLQDAHEFDKII----PNHKLHVVEGANHGYT---N---HQAELVSVVLDFVKAS 309 (319)
Q Consensus 263 ~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~---~---~~~~~~~~i~~fl~~~ 309 (319)
+. .....+++.+ -..++..++++.|.++ . ...++.+.+.+|+++.
T Consensus 281 L~--D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 281 LR--DEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred hh--hhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 86 3444444443 3467778999999953 1 2356788888888764
No 121
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.43 E-value=1.5e-11 Score=91.90 Aligned_cols=180 Identities=18% Similarity=0.213 Sum_probs=115.4
Q ss_pred CceEEEEEccCCCCCCCh--hHHHHHHHHHHcCceEEEEcCCCC----CCC--CC------CC----CCC----------
Q 020932 83 SSEIVVLCHGFRSTKDDP--SMVNLAVALQNEGISAFRFDFAGN----GES--EG------SF----QYG---------- 134 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~--~~~~~~~~l~~~G~~v~~~d~~G~----G~s--~~------~~----~~~---------- 134 (319)
.++-||++||+-.+...+ -...+.+.|.+. +..+.+|-|-- +.+ .. +. ...
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 467899999999988421 013455666666 77888876620 111 10 00 000
Q ss_pred -ChHHHHhHHHHHHHHHHhCCCceE-EEEEEehhHHHHHHHHhh---------cCCccEEEEEecccccccchhhhhchH
Q 020932 135 -NYWREADDLRAVVQYFCGANRAVG-AILGHSKGGSVVLLYASK---------YNDIRTFVNVSGRYDLKGGIEDRLGKD 203 (319)
Q Consensus 135 -~~~~~~~d~~~~i~~l~~~~~~~i-~l~G~S~Gg~~a~~~a~~---------~p~v~~~v~~~~~~~~~~~~~~~~~~~ 203 (319)
.+...-+-+..+.+++.+++ ++ .|+|+|.|+.++..++.. .|.++-+|++++.........
T Consensus 83 ~~~~~~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~------ 154 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLD------ 154 (230)
T ss_pred ccccChHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhh------
Confidence 00111123455555555554 24 899999999999988872 134788888888544321110
Q ss_pred HHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEE
Q 020932 204 YMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHV 283 (319)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~ 283 (319)
.......+++|.|.|.|+.|.++|.+.+..|++.+++..++.
T Consensus 155 --------------------------------------~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~ 196 (230)
T KOG2551|consen 155 --------------------------------------ESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLE 196 (230)
T ss_pred --------------------------------------hhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEe
Confidence 001111568999999999999999999999999999997777
Q ss_pred ecCCCccCcccHHHHHHHHHHHHHhhcC
Q 020932 284 VEGANHGYTNHQAELVSVVLDFVKASLK 311 (319)
Q Consensus 284 ~~~~gH~~~~~~~~~~~~i~~fl~~~~~ 311 (319)
-+ +||+.... ..+.+.|.+||+..+.
T Consensus 197 Hp-ggH~VP~~-~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 197 HP-GGHIVPNK-AKYKEKIADFIQSFLQ 222 (230)
T ss_pred cC-CCccCCCc-hHHHHHHHHHHHHHHH
Confidence 77 59996533 3667777777776553
No 122
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.43 E-value=1.2e-11 Score=99.48 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=87.9
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHc---CceEEEEcCCCCCCCCCC------CCCCChHHHHhHHHHHHHHHHhC-
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNE---GISAFRFDFAGNGESEGS------FQYGNYWREADDLRAVVQYFCGA- 153 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~---G~~v~~~d~~G~G~s~~~------~~~~~~~~~~~d~~~~i~~l~~~- 153 (319)
+..+++++|..|-. .+|..+.+.|.++ .+.|+++.+.||-.++.. ....+.+++++-..++++.+...
T Consensus 2 ~~li~~IPGNPGlv--~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~ 79 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV--EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQK 79 (266)
T ss_pred cEEEEEECCCCChH--HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhh
Confidence 56899999999999 5789999888754 799999999999776654 24567788888888888877664
Q ss_pred --CCceEEEEEEehhHHHHHHHHhhcC---C-ccEEEEEeccc
Q 020932 154 --NRAVGAILGHSKGGSVVLLYASKYN---D-IRTFVNVSGRY 190 (319)
Q Consensus 154 --~~~~i~l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~ 190 (319)
...+++++|||.|++++++++.+.+ . |.+++++.|..
T Consensus 80 ~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 80 NKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred cCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 4568999999999999999999999 2 99999998854
No 123
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.42 E-value=1.7e-11 Score=93.68 Aligned_cols=102 Identities=17% Similarity=0.243 Sum_probs=82.2
Q ss_pred CCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-------
Q 020932 81 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA------- 153 (319)
Q Consensus 81 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~------- 153 (319)
.|.-|.|+|+||+.-.. .+|..+...++.+||.|+++++-.. .. .+-.+.+++..++++|+.+.
T Consensus 43 ~G~yPVilF~HG~~l~n--s~Ys~lL~HIASHGfIVVAPQl~~~--~~-----p~~~~Ei~~aa~V~~WL~~gL~~~Lp~ 113 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYN--SFYSQLLAHIASHGFIVVAPQLYTL--FP-----PDGQDEIKSAASVINWLPEGLQHVLPE 113 (307)
T ss_pred CCCccEEEEeechhhhh--HHHHHHHHHHhhcCeEEEechhhcc--cC-----CCchHHHHHHHHHHHHHHhhhhhhCCC
Confidence 35779999999999887 6799999999999999999998632 11 12245578888888888654
Q ss_pred ----CCceEEEEEEehhHHHHHHHHhhcC-C--ccEEEEEecccc
Q 020932 154 ----NRAVGAILGHSKGGSVVLLYASKYN-D--IRTFVNVSGRYD 191 (319)
Q Consensus 154 ----~~~~i~l~G~S~Gg~~a~~~a~~~p-~--v~~~v~~~~~~~ 191 (319)
+..++.++|||.||-.|..+|..+. + +.++|.++|...
T Consensus 114 ~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 114 NVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred CcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 5678999999999999999998873 4 889999888543
No 124
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.42 E-value=7.9e-12 Score=89.92 Aligned_cols=170 Identities=12% Similarity=0.104 Sum_probs=111.0
Q ss_pred eEEEEEccCCCCCCChhHHHH-HHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEE
Q 020932 85 EIVVLCHGFRSTKDDPSMVNL-AVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGH 163 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~-~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~ 163 (319)
+.+|++||++++... .|+.. ...|. .+-.+++. ......++++++.+.+.+..+ .++++||+|
T Consensus 3 ~~~lIVpG~~~Sg~~-HWq~~we~~l~----~a~rveq~-------~w~~P~~~dWi~~l~~~v~a~----~~~~vlVAH 66 (181)
T COG3545 3 TDVLIVPGYGGSGPN-HWQSRWESALP----NARRVEQD-------DWEAPVLDDWIARLEKEVNAA----EGPVVLVAH 66 (181)
T ss_pred ceEEEecCCCCCChh-HHHHHHHhhCc----cchhcccC-------CCCCCCHHHHHHHHHHHHhcc----CCCeEEEEe
Confidence 568999999999864 45433 22232 23334432 223345566776666666654 345999999
Q ss_pred ehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhh
Q 020932 164 SKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHD 242 (319)
Q Consensus 164 S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (319)
|+|+.++++++.+... |.|+++++|+.......... ....+.
T Consensus 67 SLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~--------------------------------~~~tf~----- 109 (181)
T COG3545 67 SLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPK--------------------------------HLMTFD----- 109 (181)
T ss_pred cccHHHHHHHHHhhhhccceEEEecCCCccccccchh--------------------------------hccccC-----
Confidence 9999999999988766 99999999865322111000 000000
Q ss_pred hhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCcc----cHHHHHHHHHHHHHh
Q 020932 243 ACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTN----HQAELVSVVLDFVKA 308 (319)
Q Consensus 243 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~i~~fl~~ 308 (319)
.....+..-|.+++.+.+|++++++.++.+++.+. ..++...++||+.-+ .=++....+.+++.+
T Consensus 110 ~~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~wg-s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 110 PIPREPLPFPSVVVASRNDPYVSYEHAEDLANAWG-SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred CCccccCCCceeEEEecCCCCCCHHHHHHHHHhcc-HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 00111335699999999999999999999999884 577888889999532 335666666666654
No 125
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.42 E-value=1e-11 Score=106.51 Aligned_cols=138 Identities=18% Similarity=0.251 Sum_probs=108.7
Q ss_pred CccccceEEEEEeCCCCceEEEEEEeCC---CceEEEEEc--cCCCCCCC-hhHHHHHH---HHHHcCceEEEEcCCCCC
Q 020932 55 QNLAVKQQELVIPNKYGERLVGVLHDAE---SSEIVVLCH--GFRSTKDD-PSMVNLAV---ALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 55 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~---~~~~vv~~h--G~~~~~~~-~~~~~~~~---~l~~~G~~v~~~d~~G~G 125 (319)
...++..+.+.++..||++|...+|.|. +.|+++..+ .+.-.... ........ .++.+||.|+..|.||.|
T Consensus 13 ~~~~~~~~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 13 RYAGYIERDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred cccceeeeeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccc
Confidence 3345788899999999999999877654 678888888 33332100 11223334 688999999999999999
Q ss_pred CCCCCCCCCChHHHHhHHHHHHHHHHhC--CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccc
Q 020932 126 ESEGSFQYGNYWREADDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK 193 (319)
Q Consensus 126 ~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 193 (319)
.|++......- +.++|-.+.|+|+.++ ...+|..+|.|++|...+.+|+..|. +++++..++..+..
T Consensus 93 ~SeG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y 162 (563)
T COG2936 93 GSEGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRY 162 (563)
T ss_pred cCCcccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccccc
Confidence 99998865443 6799999999999998 56789999999999999999988876 99999988877644
No 126
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.40 E-value=2.9e-12 Score=94.00 Aligned_cols=201 Identities=14% Similarity=0.223 Sum_probs=127.1
Q ss_pred cceEEEEEeCCCCceEEEEEEeCCCceEEEEEccCCCCC-CChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChH
Q 020932 59 VKQQELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTK-DDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYW 137 (319)
Q Consensus 59 ~~~~~~~~~~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~ 137 (319)
.+.+.+.+-.. |.++.-.+.+....+..||+||.---. ....-...+.-+.++||+|..+++- .+. ...+.+
T Consensus 43 ~r~e~l~Yg~~-g~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~---q~htL~ 115 (270)
T KOG4627|consen 43 IRVEHLRYGEG-GRQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCP---QVHTLE 115 (270)
T ss_pred cchhccccCCC-CceEEEEecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCc---ccccHH
Confidence 34455555433 333322233345778999999963222 1123345666777889999998763 222 223567
Q ss_pred HHHhHHHHHHHHHHhC--CCceEEEEEEehhHHHHHHHHhhc--CCccEEEEEecccccccchhhhhchHHHHHhhhccc
Q 020932 138 READDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKY--NDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGF 213 (319)
Q Consensus 138 ~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (319)
+...++...++++.+. +.+++.+-|||.|+.+|+.+..+. |.|.++++.++.+++.+......+
T Consensus 116 qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g------------ 183 (270)
T KOG4627|consen 116 QTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESG------------ 183 (270)
T ss_pred HHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccc------------
Confidence 7778888888887765 556788889999999999987765 449999999997765432211110
Q ss_pred cccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccC
Q 020932 214 IDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGY 291 (319)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~ 291 (319)
. ....+.+. .+..+-+. .. ...++.|+|++.|++|.---.++.+.+.....++.+..+++.+|+-
T Consensus 184 -~--------dlgLt~~~-ae~~Scdl-~~--~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~ 248 (270)
T KOG4627|consen 184 -N--------DLGLTERN-AESVSCDL-WE--YTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYD 248 (270)
T ss_pred -c--------ccCcccch-hhhcCccH-HH--hcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhh
Confidence 0 00000000 00000000 00 1145889999999999776678889999998899999999999993
No 127
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.39 E-value=1e-11 Score=104.41 Aligned_cols=179 Identities=14% Similarity=0.195 Sum_probs=99.5
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC------CCC---CC-------------CCCh---
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES------EGS---FQ-------------YGNY--- 136 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s------~~~---~~-------------~~~~--- 136 (319)
++-|+|||-||++++. ..+..++..|+.+||-|+++|+|..-.+ ++. .. ....
T Consensus 98 ~~~PvvIFSHGlgg~R--~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSR--TSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT--T--TTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCcch--hhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 5679999999999999 4589999999999999999999954211 000 00 0000
Q ss_pred ----------HHHHhHHHHHHHHHHhC-----------------------CCceEEEEEEehhHHHHHHHHhhcCCccEE
Q 020932 137 ----------WREADDLRAVVQYFCGA-----------------------NRAVGAILGHSKGGSVVLLYASKYNDIRTF 183 (319)
Q Consensus 137 ----------~~~~~d~~~~i~~l~~~-----------------------~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~ 183 (319)
..-+.++..+++.+... +.++|+++|||+||..++..+.....+++.
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~ 255 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAG 255 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceE
Confidence 01135566666666431 245799999999999999988888779999
Q ss_pred EEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCc
Q 020932 184 VNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKI 263 (319)
Q Consensus 184 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 263 (319)
|+++++...... +. ...++.|+|+|+++. .
T Consensus 256 I~LD~W~~Pl~~-------------------------------------------~~-----~~~i~~P~L~InSe~-f- 285 (379)
T PF03403_consen 256 ILLDPWMFPLGD-------------------------------------------EI-----YSKIPQPLLFINSES-F- 285 (379)
T ss_dssp EEES---TTS-G-------------------------------------------GG-----GGG--S-EEEEEETT-T-
T ss_pred EEeCCcccCCCc-------------------------------------------cc-----ccCCCCCEEEEECcc-c-
Confidence 999986431100 00 013478999998875 2
Q ss_pred cCcchHHHHHh---hCCCCeEEEecCCCccCcc--------------------cH----HHHHHHHHHHHHhhcCC
Q 020932 264 IPLQDAHEFDK---IIPNHKLHVVEGANHGYTN--------------------HQ----AELVSVVLDFVKASLKQ 312 (319)
Q Consensus 264 ~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~--------------------~~----~~~~~~i~~fl~~~~~~ 312 (319)
.-.+....+.+ .-++..++.+.|+.|.-+. ++ +...+.+.+||++++.-
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 286 QWWENIFRMKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLGL 361 (379)
T ss_dssp --HHHHHHHHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred CChhhHHHHHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 22233333333 2245678899999998321 12 23467788999998763
No 128
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.38 E-value=4e-12 Score=103.91 Aligned_cols=109 Identities=11% Similarity=0.116 Sum_probs=85.2
Q ss_pred CceEEEEEccCCCCCCC---hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHH-hHHHHHHHHHHhC-CCce
Q 020932 83 SSEIVVLCHGFRSTKDD---PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREA-DDLRAVVQYFCGA-NRAV 157 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~-~d~~~~i~~l~~~-~~~~ 157 (319)
-+++++++|.+-....- ..-+.++..|.++|+.|+.+++++-..+.. ..++++++ +++...++.+++. +.++
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~---~~~~edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA---AKNLEDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh---hccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 35689999998765411 112678899999999999999987666555 33566766 8888888888776 6688
Q ss_pred EEEEEEehhHHHHHHHHhhcCC--ccEEEEEeccccccc
Q 020932 158 GAILGHSKGGSVVLLYASKYND--IRTFVNVSGRYDLKG 194 (319)
Q Consensus 158 i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~ 194 (319)
|.++|+|.||.++..+++.++. |+.++++.+..++..
T Consensus 183 InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~ 221 (445)
T COG3243 183 INLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSH 221 (445)
T ss_pred cceeeEecchHHHHHHHHhhhhcccccceeeecchhhcc
Confidence 9999999999999988888765 999999988776553
No 129
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.35 E-value=7.2e-12 Score=97.56 Aligned_cols=163 Identities=14% Similarity=0.214 Sum_probs=82.6
Q ss_pred CceEEEEEccCCCCCCChhH----HHHHHHHHHcCceEEEEcCCCC-----CCCC-------------CCCCCC------
Q 020932 83 SSEIVVLCHGFRSTKDDPSM----VNLAVALQNEGISAFRFDFAGN-----GESE-------------GSFQYG------ 134 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~----~~~~~~l~~~G~~v~~~d~~G~-----G~s~-------------~~~~~~------ 134 (319)
+++-||++||++.+.+ .+ ..+.+.|.+.++.++.+|-|-- |-.. ....+.
T Consensus 3 ~k~riLcLHG~~~na~--if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAE--IFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT--HH--HHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCcCHH--HHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 4778999999999994 45 3455556553689888885521 1110 000000
Q ss_pred -ChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc---------CCccEEEEEecccccccchhhhhchHH
Q 020932 135 -NYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY---------NDIRTFVNVSGRYDLKGGIEDRLGKDY 204 (319)
Q Consensus 135 -~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~---------p~v~~~v~~~~~~~~~~~~~~~~~~~~ 204 (319)
.+....+.+..+.+.+.+.++ =..|+|+|.||.+|..++... +.++.+|++++..........
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~------ 153 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQE------ 153 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTT------
T ss_pred ccccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhh------
Confidence 011122223333333333332 248999999999998887642 238899999885542211000
Q ss_pred HHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCC-CeEEE
Q 020932 205 MEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN-HKLHV 283 (319)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~ 283 (319)
.. ...++++|+|.|+|.+|.+++++.++.+.+.+.+ .+++.
T Consensus 154 -----------------------------------~~---~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~ 195 (212)
T PF03959_consen 154 -----------------------------------LY---DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIE 195 (212)
T ss_dssp -----------------------------------TT-----TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEE
T ss_pred -----------------------------------hh---ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEE
Confidence 00 1125689999999999999999999999999877 77777
Q ss_pred ecCCCccCcc
Q 020932 284 VEGANHGYTN 293 (319)
Q Consensus 284 ~~~~gH~~~~ 293 (319)
.+ +||.+-.
T Consensus 196 h~-gGH~vP~ 204 (212)
T PF03959_consen 196 HD-GGHHVPR 204 (212)
T ss_dssp ES-SSSS---
T ss_pred EC-CCCcCcC
Confidence 77 5888643
No 130
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.33 E-value=7.2e-10 Score=88.63 Aligned_cols=114 Identities=18% Similarity=0.240 Sum_probs=87.1
Q ss_pred ceEEEEEeCCCCceEEEEEEe-C--CCceEEEEEccCCCCCCChhH-----HHHHHHHHHcCceEEEEcCCCCCCCCCCC
Q 020932 60 KQQELVIPNKYGERLVGVLHD-A--ESSEIVVLCHGFRSTKDDPSM-----VNLAVALQNEGISAFRFDFAGNGESEGSF 131 (319)
Q Consensus 60 ~~~~~~~~~~dg~~l~~~~~~-~--~~~~~vv~~hG~~~~~~~~~~-----~~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 131 (319)
..+++.+.. |+..+...... + .+...||++-|.++..+.... ..+.+.....|-+|+.+++||.|.|.+..
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~ 189 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP 189 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC
Confidence 567788876 78888876553 2 367799999999887764111 22333333457899999999999999887
Q ss_pred CCCChHHHHhHHHHHHHHHHhC----CCceEEEEEEehhHHHHHHHHhhc
Q 020932 132 QYGNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 132 ~~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
. .++++.|..+++++|+++ +.++|++.|||+||.++..++...
T Consensus 190 s---~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 190 S---RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred C---HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 3 488899999999999864 347899999999999999866554
No 131
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.32 E-value=3.9e-11 Score=93.27 Aligned_cols=154 Identities=18% Similarity=0.194 Sum_probs=95.8
Q ss_pred CCCceEEEEEEeCC------Cc-eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC---CCCC-CC----CC
Q 020932 69 KYGERLVGVLHDAE------SS-EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG---ESEG-SF----QY 133 (319)
Q Consensus 69 ~dg~~l~~~~~~~~------~~-~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G---~s~~-~~----~~ 133 (319)
.-|.++.+.++.|+ +- |.|||+||.|..+.. -...+ +. |.--++++.+-.+ .++. .. ..
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~d-n~~~l---~s--g~gaiawa~pedqcfVlAPQy~~if~d~e 242 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSD-NDKVL---SS--GIGAIAWAGPEDQCFVLAPQYNPIFADSE 242 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCch-hhhhh---hc--CccceeeecccCceEEEcccccccccccc
Confidence 34788999888773 23 899999999988753 11111 11 2223333333222 0000 00 00
Q ss_pred CChHHHHhHHHHHHH-HHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHHHHh
Q 020932 134 GNYWREADDLRAVVQ-YFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKI 208 (319)
Q Consensus 134 ~~~~~~~~d~~~~i~-~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 208 (319)
...+........+++ .+.++ +..+|+++|.|+||+-++.++.++|+ +.+.+++++..+......
T Consensus 243 ~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~lv~----------- 311 (387)
T COG4099 243 EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVYLVR----------- 311 (387)
T ss_pred cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhhhhh-----------
Confidence 011222233333333 44444 66799999999999999999999999 999999998544210000
Q ss_pred hhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC
Q 020932 209 MQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP 277 (319)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 277 (319)
..-+.|+.++|+.+|.++|.+.++-+++.++
T Consensus 312 --------------------------------------~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk 342 (387)
T COG4099 312 --------------------------------------TLKKAPIWVFHSSDDKVIPVSNSRVLYERLK 342 (387)
T ss_pred --------------------------------------hhccCceEEEEecCCCccccCcceeehHHHH
Confidence 0117899999999999999998876666554
No 132
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.31 E-value=5.3e-11 Score=101.21 Aligned_cols=239 Identities=15% Similarity=0.071 Sum_probs=159.4
Q ss_pred cccceEEEEEeCCCCceEEEEEEeC----CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ 132 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 132 (319)
.++..++...++.||++|.++.... .+.|++|+--|....+....+......+.++|...+..+.||-|+-.+.-+
T Consensus 390 ~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH 469 (648)
T COG1505 390 DNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWH 469 (648)
T ss_pred cCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHH
Confidence 4678888888999999999987742 257777776666655544456666688889999999999999887653221
Q ss_pred C----CChHHHHhHHHHHHHHHHhCC---CceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHH
Q 020932 133 Y----GNYWREADDLRAVVQYFCGAN---RAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDY 204 (319)
Q Consensus 133 ~----~~~~~~~~d~~~~i~~l~~~~---~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~ 204 (319)
. .+-....+|..++.+.|.+++ ++++.+.|-|-||.+.-....++|+ +.++|+--|..++.+--.-..+..|
T Consensus 470 ~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW 549 (648)
T COG1505 470 QAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSW 549 (648)
T ss_pred HHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhh
Confidence 1 112334689999999998885 4689999999999999888899999 8888888886665433222223333
Q ss_pred HHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCC--CeEE
Q 020932 205 MEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN--HKLH 282 (319)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~ 282 (319)
..... .+..++...................-.|+||-.+.+|.-|.|.++++++..+.. ..+.
T Consensus 550 ~~EYG---------------~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~ 614 (648)
T COG1505 550 IAEYG---------------NPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVL 614 (648)
T ss_pred HhhcC---------------CCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceE
Confidence 32211 111222222222333333333323346899999999999999999998877643 3333
Q ss_pred Ee--cCCCccCcccH---HHHHHHHHHHHHhhc
Q 020932 283 VV--EGANHGYTNHQ---AELVSVVLDFVKASL 310 (319)
Q Consensus 283 ~~--~~~gH~~~~~~---~~~~~~i~~fl~~~~ 310 (319)
.+ .++||.--.+. ..-...+..||.+.+
T Consensus 615 ~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 615 LREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred EEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 33 36899964333 334555667887765
No 133
>PRK04940 hypothetical protein; Provisional
Probab=99.29 E-value=5.3e-10 Score=82.44 Aligned_cols=174 Identities=13% Similarity=0.131 Sum_probs=100.2
Q ss_pred EEEEccCCCCCCChh--HHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCC-CceEEEEEE
Q 020932 87 VVLCHGFRSTKDDPS--MVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGAN-RAVGAILGH 163 (319)
Q Consensus 87 vv~~hG~~~~~~~~~--~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~-~~~i~l~G~ 163 (319)
||++||+.++..+.. .+.+. .+ ..+++++ +++ ........+.+.+.+..+...+ .+++.|+|.
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~-~~-~p~~~~~--~l~----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQ-FI-DPDVRLI--SYS----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhhe-ee-CCCCeEE--ECC----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 799999999986511 11111 22 1123333 221 0112222334444444322211 246999999
Q ss_pred ehhHHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhh
Q 020932 164 SKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDA 243 (319)
Q Consensus 164 S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (319)
|+||+.|..++.++. ...|+++|.......+...++. ... +....+...+.+.
T Consensus 68 SLGGyyA~~La~~~g--~~aVLiNPAv~P~~~L~~~ig~-----------------~~~--y~~~~~~h~~eL~------ 120 (180)
T PRK04940 68 GLGGYWAERIGFLCG--IRQVIFNPNLFPEENMEGKIDR-----------------PEE--YADIATKCVTNFR------ 120 (180)
T ss_pred ChHHHHHHHHHHHHC--CCEEEECCCCChHHHHHHHhCC-----------------Ccc--hhhhhHHHHHHhh------
Confidence 999999999999876 4778899987764433322210 000 1111111111111
Q ss_pred hhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCC-eEEEecCCCccCcccHHHHHHHHHHHHHh
Q 020932 244 CLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNH-KLHVVEGANHGYTNHQAELVSVVLDFVKA 308 (319)
Q Consensus 244 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 308 (319)
.+..-..+++..+.|.+.+...+.+.+. ++ ++.+.+|++|.+. +-++....|.+|++.
T Consensus 121 ---~~~p~r~~vllq~gDEvLDyr~a~~~y~---~~y~~~v~~GGdH~f~-~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 121 ---EKNRDRCLVILSRNDEVLDSQRTAEELH---PYYEIVWDEEQTHKFK-NISPHLQRIKAFKTL 179 (180)
T ss_pred ---hcCcccEEEEEeCCCcccCHHHHHHHhc---cCceEEEECCCCCCCC-CHHHHHHHHHHHHhc
Confidence 1123457999999999998777665553 44 6888898888863 446688889999853
No 134
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.28 E-value=3.7e-11 Score=95.23 Aligned_cols=131 Identities=22% Similarity=0.195 Sum_probs=93.0
Q ss_pred cceEEEEEeCCCCceEEEEEEeCC------CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC
Q 020932 59 VKQQELVIPNKYGERLVGVLHDAE------SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ 132 (319)
Q Consensus 59 ~~~~~~~~~~~dg~~l~~~~~~~~------~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 132 (319)
-..++..+.+.||.++...+.... .+..||++-|..+-.+- .....=++.||.|+.+++||++.|.+.+.
T Consensus 212 ~NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv----G~m~tP~~lgYsvLGwNhPGFagSTG~P~ 287 (517)
T KOG1553|consen 212 KNGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV----GVMNTPAQLGYSVLGWNHPGFAGSTGLPY 287 (517)
T ss_pred CCCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe----eeecChHHhCceeeccCCCCccccCCCCC
Confidence 457888999999999988776421 34578888887764421 22223345689999999999999998774
Q ss_pred CCChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccccccch
Q 020932 133 YGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYDLKGGI 196 (319)
Q Consensus 133 ~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~~~~~~ 196 (319)
...- ...+.+++++.... ..+.|++.|||.||..+..+|..+|+|+++|+-++.-++....
T Consensus 288 p~n~---~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLA 351 (517)
T KOG1553|consen 288 PVNT---LNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLA 351 (517)
T ss_pred cccc---hHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHH
Confidence 4332 22233333333222 4567999999999999999999999999999998866554433
No 135
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.27 E-value=8.9e-11 Score=87.20 Aligned_cols=176 Identities=14% Similarity=0.190 Sum_probs=115.6
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC------------------CCCCCCCChHHHHhHHHH
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES------------------EGSFQYGNYWREADDLRA 145 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s------------------~~~~~~~~~~~~~~d~~~ 145 (319)
..+||++||.|.+..+ |.++.+.|.-.....+++.-|-.-.+ ....+..+....++.+..
T Consensus 3 ~atIi~LHglGDsg~~--~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSG--WAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred eEEEEEEecCCCCCcc--HHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 4589999999999954 77777777666677787754422111 011122233444566666
Q ss_pred HHHHHHhC--CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCc
Q 020932 146 VVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGD 222 (319)
Q Consensus 146 ~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (319)
+++...+. +..+|.+-|+|+||.+++..+..++. +.+++..++........... ...
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~~~~----------------~~~---- 140 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIGLPG----------------WLP---- 140 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhhccC----------------Ccc----
Confidence 66666555 45689999999999999999999977 88888777754311110000 000
Q ss_pred ceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhC----CCCeEEEecCCCccCcccHHHH
Q 020932 223 VEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKII----PNHKLHVVEGANHGYTNHQAEL 298 (319)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~~~gH~~~~~~~~~ 298 (319)
..+ ..|++..||+.|++||....+...+.+ ..++++.+++.+|... .+-
T Consensus 141 -----------------------~~~-~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~---~~e 193 (206)
T KOG2112|consen 141 -----------------------GVN-YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS---PQE 193 (206)
T ss_pred -----------------------ccC-cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc---HHH
Confidence 001 579999999999999987665544433 3478999999999964 233
Q ss_pred HHHHHHHHHh
Q 020932 299 VSVVLDFVKA 308 (319)
Q Consensus 299 ~~~i~~fl~~ 308 (319)
.+.+..|+++
T Consensus 194 ~~~~~~~~~~ 203 (206)
T KOG2112|consen 194 LDDLKSWIKT 203 (206)
T ss_pred HHHHHHHHHH
Confidence 4556667765
No 136
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.24 E-value=1.4e-10 Score=114.45 Aligned_cols=217 Identities=9% Similarity=0.044 Sum_probs=127.0
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 161 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 161 (319)
+.+++++++||++++. +.|..+++.|... +.|+.++++|+|.+. ....+++.+++++.+.++.+. ...+++++
T Consensus 1066 ~~~~~l~~lh~~~g~~--~~~~~l~~~l~~~-~~v~~~~~~g~~~~~--~~~~~l~~la~~~~~~i~~~~--~~~p~~l~ 1138 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFA--WQFSVLSRYLDPQ-WSIYGIQSPRPDGPM--QTATSLDEVCEAHLATLLEQQ--PHGPYHLL 1138 (1296)
T ss_pred CCCCCeEEecCCCCch--HHHHHHHHhcCCC-CcEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHhhC--CCCCEEEE
Confidence 4457899999999988 6799999998764 999999999998653 234577888888888887652 23479999
Q ss_pred EEehhHHHHHHHHhhc---CC-ccEEEEEecccccccchhh----hhchHHHHHhhh--ccccccccCCCcceeeeehhh
Q 020932 162 GHSKGGSVVLLYASKY---ND-IRTFVNVSGRYDLKGGIED----RLGKDYMEKIMQ--DGFIDVKNKTGDVEYRVTEES 231 (319)
Q Consensus 162 G~S~Gg~~a~~~a~~~---p~-v~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 231 (319)
|||+||.+|..+|.+. ++ +..++++++.......... ............ ........ ... .......
T Consensus 1139 G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~ 1215 (1296)
T PRK10252 1139 GYSLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQ--GSL-STELFTT 1215 (1296)
T ss_pred EechhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhh--ccc-cHHHHHH
Confidence 9999999999998863 45 8888888764321100000 000000000000 00000000 000 0000011
Q ss_pred HHhhhccch--hhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCcccHHHHHHHHHHHHHhh
Q 020932 232 LMDRLNTNM--HDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVKAS 309 (319)
Q Consensus 232 ~~~~~~~~~--~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 309 (319)
+...+.... ........+.+|++++.+..|..........+.+...+.++..++ ++|+.+..+.. ...+.++|.+.
T Consensus 1216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~v~-g~H~~~~~~~~-~~~~~~~l~~~ 1293 (1296)
T PRK10252 1216 IEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWIAELDVYRQD-CAHVDIISPEA-FEKIGPILRAT 1293 (1296)
T ss_pred HHHHHHHHHHHHHhccCCcccCceEEEEcCCCCcccCCcccchhhhcCCCEEEECC-CCHHHHCCcHH-HHHHHHHHHHH
Confidence 111111100 001111245789999999998766555555555555667888886 68997544433 35555566554
Q ss_pred c
Q 020932 310 L 310 (319)
Q Consensus 310 ~ 310 (319)
+
T Consensus 1294 l 1294 (1296)
T PRK10252 1294 L 1294 (1296)
T ss_pred h
Confidence 3
No 137
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.24 E-value=5.4e-11 Score=96.40 Aligned_cols=196 Identities=19% Similarity=0.189 Sum_probs=113.0
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC--CCCCCCC------CCCChHHHHhHHHHHHHHHHhC-
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN--GESEGSF------QYGNYWREADDLRAVVQYFCGA- 153 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~--G~s~~~~------~~~~~~~~~~d~~~~i~~l~~~- 153 (319)
..|.|++-||.|+...+ +..+++.|++.||.|..++++|- |..+... ....+.+...|+..+|++|.+.
T Consensus 70 ~~PlvvlshG~Gs~~~~--f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~ 147 (365)
T COG4188 70 LLPLVVLSHGSGSYVTG--FAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLT 147 (365)
T ss_pred cCCeEEecCCCCCCccc--hhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhh
Confidence 56899999999999854 78899999999999999999984 3332111 1112345568888888887765
Q ss_pred ---------CCceEEEEEEehhHHHHHHHHhhcCCccEEE-------EEeccccccc--chhhhhchHHHHHhhhccccc
Q 020932 154 ---------NRAVGAILGHSKGGSVVLLYASKYNDIRTFV-------NVSGRYDLKG--GIEDRLGKDYMEKIMQDGFID 215 (319)
Q Consensus 154 ---------~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v-------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 215 (319)
+..+|.++|||+||+.++.++....+...+. .++....... ...+....... ..-.+
T Consensus 148 ~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q~~av~~~-----~~~~~ 222 (365)
T COG4188 148 ASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQCAAVWLP-----RQAYD 222 (365)
T ss_pred cCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhccccccccc-----hhhhc
Confidence 3568999999999999999887665411111 1111111000 00000000000 00000
Q ss_pred cccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcc-hHHHHHhhCCCC--eEEEecCCCccC
Q 020932 216 VKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQ-DAHEFDKIIPNH--KLHVVEGANHGY 291 (319)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~--~~~~~~~~gH~~ 291 (319)
..+...+........ ...........+++.|++++.|..|...|+. ........+++. -+..++++.|+-
T Consensus 223 ~rDpriravvA~~p~------~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~s 295 (365)
T COG4188 223 LRDPRIRAVVAINPA------LGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFS 295 (365)
T ss_pred cccccceeeeeccCC------cccccccccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCcccc
Confidence 000000000000000 0000111122367899999999999987754 445556677765 678889999994
No 138
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=99.20 E-value=1.1e-09 Score=83.51 Aligned_cols=201 Identities=17% Similarity=0.249 Sum_probs=125.6
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcC-----ceEEEEcCCCC----CCCCC-----------CCCCCChHHHHhHHHH
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEG-----ISAFRFDFAGN----GESEG-----------SFQYGNYWREADDLRA 145 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G-----~~v~~~d~~G~----G~s~~-----------~~~~~~~~~~~~d~~~ 145 (319)
|.||+||++++.. ....++..|...+ --++.+|--|. |.-+. .....+..++...+..
T Consensus 47 PTIfIhGsgG~as--S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 47 PTIFIHGSGGTAS--SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ceEEEecCCCChh--HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 6899999999994 4788888887763 13566666652 21111 1122345667889999
Q ss_pred HHHHHHhC-CCceEEEEEEehhHHHHHHHHhhc------CCccEEEEEecccccccchhhhhchHHHHHhhhcccccccc
Q 020932 146 VVQYFCGA-NRAVGAILGHSKGGSVVLLYASKY------NDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKN 218 (319)
Q Consensus 146 ~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~------p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (319)
++.+|.++ +.+++.++||||||.-...++..+ |.+..+|.++++++........ ...+...
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de------------~v~~v~~ 192 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDE------------TVTDVLK 192 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCc------------chheeec
Confidence 99999988 888999999999999999988876 4599999999988721111000 0000000
Q ss_pred CCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCC------CCccCcchHHHHHhhCCC---C-e--EEEecC
Q 020932 219 KTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSS------DKIIPLQDAHEFDKIIPN---H-K--LHVVEG 286 (319)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~------D~~~~~~~~~~~~~~~~~---~-~--~~~~~~ 286 (319)
.... .......+.+.. ........+.+|+|.|+- |..||...+...+..+++ . . +..=++
T Consensus 193 ~~~~----~~~t~y~~y~~~----n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~ 264 (288)
T COG4814 193 DGPG----LIKTPYYDYIAK----NYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKD 264 (288)
T ss_pred cCcc----ccCcHHHHHHHh----cceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCc
Confidence 0000 000111111110 111113367899999984 566777777776666653 2 1 233346
Q ss_pred CCccCcccHHHHHHHHHHHHHh
Q 020932 287 ANHGYTNHQAELVSVVLDFVKA 308 (319)
Q Consensus 287 ~gH~~~~~~~~~~~~i~~fl~~ 308 (319)
+.|.-+.+.+.+.+.+..||-+
T Consensus 265 a~Hs~lhen~~v~~yv~~FLw~ 286 (288)
T COG4814 265 ARHSKLHENPTVAKYVKNFLWE 286 (288)
T ss_pred chhhccCCChhHHHHHHHHhhc
Confidence 8899776778888899999864
No 139
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.18 E-value=1.4e-09 Score=88.65 Aligned_cols=65 Identities=14% Similarity=0.187 Sum_probs=48.6
Q ss_pred cCCCcEEEEecCCCCccCcchHHHHHhhC-----CCCeEEEecCCCccCcccHHHHHHHHHHHHHhhcCCCC
Q 020932 248 DMECSVLTIHGSSDKIIPLQDAHEFDKII-----PNHKLHVVEGANHGYTNHQAELVSVVLDFVKASLKQDH 314 (319)
Q Consensus 248 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~~~~~~ 314 (319)
..+.|+++.+|..|.++|.....++.+.+ .+++++.+++.+|.... ..-.....+||.+.+..+.
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~--~~~~~~a~~Wl~~rf~G~~ 286 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA--FASAPDALAWLDDRFAGKP 286 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh--hcCcHHHHHHHHHHHCCCC
Confidence 44799999999999999998887776543 35678888999998531 1123566789998887664
No 140
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.16 E-value=9.5e-10 Score=86.04 Aligned_cols=107 Identities=23% Similarity=0.242 Sum_probs=71.9
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHH--------cCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQN--------EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA- 153 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~- 153 (319)
.+.+|||+||.+++.. .++.++..+.+ ..++++++|+......- ....+....+.+.+.++.+.+.
T Consensus 3 ~g~pVlFIhG~~Gs~~--q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~---~g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYK--QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF---HGRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHh--HHHHHHHHHhhhhhhccCccceeEEEeccCcccccc---ccccHHHHHHHHHHHHHHHHHhh
Confidence 4678999999988873 46667666522 14788999987532211 1123334445555555554332
Q ss_pred -----CCceEEEEEEehhHHHHHHHHhhcC---C-ccEEEEEeccccccc
Q 020932 154 -----NRAVGAILGHSKGGSVVLLYASKYN---D-IRTFVNVSGRYDLKG 194 (319)
Q Consensus 154 -----~~~~i~l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~~~~ 194 (319)
+.++|+++||||||.+|..++...+ + |+.+|.++++.....
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 5678999999999999988776653 3 999999988765443
No 141
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.16 E-value=3.9e-10 Score=88.17 Aligned_cols=124 Identities=23% Similarity=0.190 Sum_probs=85.2
Q ss_pred EEEeCCCCceEEEEEEeCC----CceEEEEEccCCCCCCChhHHHHH--HHHH-HcCceEEEEcC-C------CCCCCCC
Q 020932 64 LVIPNKYGERLVGVLHDAE----SSEIVVLCHGFRSTKDDPSMVNLA--VALQ-NEGISAFRFDF-A------GNGESEG 129 (319)
Q Consensus 64 ~~~~~~dg~~l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~--~~l~-~~G~~v~~~d~-~------G~G~s~~ 129 (319)
.++.. +|.+..++++.|. +.|.||++||.+++... +.... +.|+ ..||-|+.+|- + +.+.+..
T Consensus 38 ~s~~~-~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag--~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~ 114 (312)
T COG3509 38 ASFDV-NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG--QLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFG 114 (312)
T ss_pred ccccc-CCCccceEEEcCCCCCCCCCEEEEEecCCCChHH--hhcccchhhhhcccCcEEECcCccccccCCCcccccCC
Confidence 34443 3777888887653 45799999999998842 32222 4444 34999999852 2 2223322
Q ss_pred CCCCCChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccc
Q 020932 130 SFQYGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRY 190 (319)
Q Consensus 130 ~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 190 (319)
+.....-.+.+.++.+++..+..+ +..+|++.|.|-||.++..++..+|+ +.++..+++..
T Consensus 115 p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 115 PADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 221111234577888888888777 56699999999999999999999999 88888887754
No 142
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.13 E-value=1.5e-08 Score=87.93 Aligned_cols=118 Identities=18% Similarity=0.127 Sum_probs=82.2
Q ss_pred CceEEEEEEeCC----CceEEEEEccCCCCCCChhHHHHH------------------HHHHHcCceEEEEcCC-CCCCC
Q 020932 71 GERLVGVLHDAE----SSEIVVLCHGFRSTKDDPSMVNLA------------------VALQNEGISAFRFDFA-GNGES 127 (319)
Q Consensus 71 g~~l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~------------------~~l~~~G~~v~~~d~~-G~G~s 127 (319)
+..+.+|++++. +.|+||+++|..+++. ++..+. -.+.+. .+++.+|.| |+|.|
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss--~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S 136 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSS--MFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFS 136 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHH--HHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcc
Confidence 678888888743 6799999999988772 332211 013333 578899975 88888
Q ss_pred CCCCC--CCChHHHHhHHHHHHHHHHhC----CCceEEEEEEehhHHHHHHHHhhc---------CC--ccEEEEEeccc
Q 020932 128 EGSFQ--YGNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASKY---------ND--IRTFVNVSGRY 190 (319)
Q Consensus 128 ~~~~~--~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~---------p~--v~~~v~~~~~~ 190 (319)
..... ..+.++.++|+.++++...++ ...+++|+|||+||..+-.+|.+. .. ++++++-+|..
T Consensus 137 ~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 137 YADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred cCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 65432 234467788999888866543 346899999999999887776652 12 78888888755
Q ss_pred c
Q 020932 191 D 191 (319)
Q Consensus 191 ~ 191 (319)
+
T Consensus 217 d 217 (462)
T PTZ00472 217 D 217 (462)
T ss_pred C
Confidence 4
No 143
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=99.11 E-value=7.8e-08 Score=78.99 Aligned_cols=204 Identities=15% Similarity=0.180 Sum_probs=130.9
Q ss_pred eEEEEEeCCCCceEEEEEEeCC---CceEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCCC--CCCCC------
Q 020932 61 QQELVIPNKYGERLVGVLHDAE---SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFAG--NGESE------ 128 (319)
Q Consensus 61 ~~~~~~~~~dg~~l~~~~~~~~---~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G--~G~s~------ 128 (319)
.+-+.+... +.++-..+.+.. ...+||++||.+.+.+. .....+...|.++||.++.+.+|. .....
T Consensus 62 ~e~~~L~~~-~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~ 140 (310)
T PF12048_consen 62 DEVQWLQAG-EERFLALWRPANSAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEA 140 (310)
T ss_pred hhcEEeecC-CEEEEEEEecccCCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCC
Confidence 344455543 444444444332 45699999999999863 456788889999999999998887 11000
Q ss_pred ------C--CC-CC----------------CChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC--cc
Q 020932 129 ------G--SF-QY----------------GNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND--IR 181 (319)
Q Consensus 129 ------~--~~-~~----------------~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--v~ 181 (319)
+ .. .. ..-.....-+.+++.++.+++..+++|+||+.|+..++.+....+. ++
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~d 220 (310)
T PF12048_consen 141 EEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPD 220 (310)
T ss_pred CCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccC
Confidence 0 00 00 0012334567777777777777789999999999999999998875 99
Q ss_pred EEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCC
Q 020932 182 TFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSD 261 (319)
Q Consensus 182 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 261 (319)
++|++++.......-. .+.+ . ..+++.|+|=|++.+.
T Consensus 221 aLV~I~a~~p~~~~n~---------------------------------~l~~--------~--la~l~iPvLDi~~~~~ 257 (310)
T PF12048_consen 221 ALVLINAYWPQPDRNP---------------------------------ALAE--------Q--LAQLKIPVLDIYSADN 257 (310)
T ss_pred eEEEEeCCCCcchhhh---------------------------------hHHH--------H--hhccCCCEEEEecCCC
Confidence 9999998654321100 0000 0 0134889999998884
Q ss_pred CccCcchH---HHHHhhC--CCCeEEEecCCCccCcccHHHHHHHHHHHHHhh
Q 020932 262 KIIPLQDA---HEFDKII--PNHKLHVVEGANHGYTNHQAELVSVVLDFVKAS 309 (319)
Q Consensus 262 ~~~~~~~~---~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~~ 309 (319)
..+ .+.+ +.+.++. ++.+-+.+.+..|......+.+.+.|..||+++
T Consensus 258 ~~~-~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 258 PAS-QQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred hHH-HHHHHHHHHHHHhccCCCceeEecCCCCCChhhHHHHHHHHHHHHHHhh
Confidence 332 2222 1222332 245666777777766555566999999999874
No 144
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=1.6e-09 Score=92.97 Aligned_cols=244 Identities=16% Similarity=0.123 Sum_probs=147.4
Q ss_pred cccceEEEEEeCCCCceEEEEEEeC------CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDA------ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS 130 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~------~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 130 (319)
..+..+++.+++.||+.+....... +++|.+|+.+|.-+-+-...|..-...|.+.|+.....|.||-|+-...
T Consensus 437 s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~ 516 (712)
T KOG2237|consen 437 SDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQ 516 (712)
T ss_pred cceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccc
Confidence 4567889999999998887644322 3778777777765443223354444556778998888999998765433
Q ss_pred CCCCC----hHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhch
Q 020932 131 FQYGN----YWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGK 202 (319)
Q Consensus 131 ~~~~~----~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~ 202 (319)
..... =..-.+|..+.+++|.++ ...+..+.|.|.||.++..++..+|+ +.++|+-.|..+...........
T Consensus 517 WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilp 596 (712)
T KOG2237|consen 517 WHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILP 596 (712)
T ss_pred hhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccc
Confidence 21111 022368999999999888 46789999999999999999999999 88888888877765544443333
Q ss_pred HHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC-----
Q 020932 203 DYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----- 277 (319)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----- 277 (319)
.+...+...+... ....+.................-..+|+..+.+|..|.+..+.++.+.+.
T Consensus 597 lt~sd~ee~g~p~------------~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~ 664 (712)
T KOG2237|consen 597 LTTSDYEEWGNPE------------DFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCD 664 (712)
T ss_pred cchhhhcccCChh------------hhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhc
Confidence 3333322211111 00001000001111111111112358899999987776665555443331
Q ss_pred ------CCeEEEecCCCccCcccHH---HHHHHHHHHHHhhcCC
Q 020932 278 ------NHKLHVVEGANHGYTNHQA---ELVSVVLDFVKASLKQ 312 (319)
Q Consensus 278 ------~~~~~~~~~~gH~~~~~~~---~~~~~i~~fl~~~~~~ 312 (319)
.+-+.+-.++||..-.... +-.....+||.+.+..
T Consensus 665 ~~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 665 SLKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLNS 708 (712)
T ss_pred chhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhcC
Confidence 1335666799999643322 2234455777776654
No 145
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.06 E-value=3.6e-09 Score=85.04 Aligned_cols=110 Identities=16% Similarity=0.138 Sum_probs=81.4
Q ss_pred CCceEEEEEEeCC------CceEEEEEccCCCCCCChhHHHHHHHHHHc---C------ceEEEEcCCCCCCCCCCCCC-
Q 020932 70 YGERLVGVLHDAE------SSEIVVLCHGFRSTKDDPSMVNLAVALQNE---G------ISAFRFDFAGNGESEGSFQY- 133 (319)
Q Consensus 70 dg~~l~~~~~~~~------~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~---G------~~v~~~d~~G~G~s~~~~~~- 133 (319)
.|.+++.....+. .-.+++++|||.++- +.+..++..|.+. | |.|+++.+||+|.|+++...
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv--~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~G 209 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSV--REFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTG 209 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchH--HHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCC
Confidence 4878886554332 224899999999998 6688888888654 3 68999999999999987643
Q ss_pred CChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEE
Q 020932 134 GNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFV 184 (319)
Q Consensus 134 ~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v 184 (319)
.+..+.+.-+..++-.| +.++..+-|--+|+.++..+|..+|+ |.++=
T Consensus 210 Fn~~a~ArvmrkLMlRL---g~nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 210 FNAAATARVMRKLMLRL---GYNKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred ccHHHHHHHHHHHHHHh---CcceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 33233333333333333 88999999999999999999999998 76653
No 146
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.06 E-value=1.8e-10 Score=88.73 Aligned_cols=100 Identities=23% Similarity=0.290 Sum_probs=60.3
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCce---EEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEEE
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGIS---AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAI 160 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l 160 (319)
.||||+||.+++.. .-|..+++.|.++||. ++++++-...............+.+..+.++|+.+.+. +. +|-|
T Consensus 2 ~PVVlVHG~~~~~~-~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAY-SNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDI 79 (219)
T ss_dssp --EEEE--TTTTTC-GGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEE
T ss_pred CCEEEECCCCcchh-hCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEE
Confidence 57999999998665 4689999999999999 79999853332111111111123457788888877765 66 9999
Q ss_pred EEEehhHHHHHHHHhhcCCccEEEEE
Q 020932 161 LGHSKGGSVVLLYASKYNDIRTFVNV 186 (319)
Q Consensus 161 ~G~S~Gg~~a~~~a~~~p~v~~~v~~ 186 (319)
|||||||.++-.+.......+..+.+
T Consensus 80 VgHS~G~~iaR~yi~~~~~~d~~~~l 105 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKGGGGADKVVNL 105 (219)
T ss_dssp EEETCHHHHHHHHHHHCTGGGTEEE-
T ss_pred EEcCCcCHHHHHHHHHcCCCCcccCc
Confidence 99999999998887654324433333
No 147
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.00 E-value=6.3e-09 Score=88.64 Aligned_cols=160 Identities=21% Similarity=0.263 Sum_probs=104.1
Q ss_pred CceEEEEEccCC-CCCCChhHHHHHHHHHHcC--ceEEEEcCCCC-CCCCCCCCCCChHHHHhHHHHHHHHHHhC-----
Q 020932 83 SSEIVVLCHGFR-STKDDPSMVNLAVALQNEG--ISAFRFDFAGN-GESEGSFQYGNYWREADDLRAVVQYFCGA----- 153 (319)
Q Consensus 83 ~~~~vv~~hG~~-~~~~~~~~~~~~~~l~~~G--~~v~~~d~~G~-G~s~~~~~~~~~~~~~~d~~~~i~~l~~~----- 153 (319)
..|.++++||.+ ....+..+..+-+.|.-.| ..+..+|++.- |. .++...++-+..+.++...+
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-------~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-------ANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-------cchHHHHHHHHHHhhhhhhhhhccC
Confidence 357889999988 2221112223334443333 45667777631 11 23333444444444432222
Q ss_pred CCceEEEEEEehhHHHHHHHHhhcCC--ccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhh
Q 020932 154 NRAVGAILGHSKGGSVVLLYASKYND--IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEES 231 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (319)
...+|+|+|.|||+.++++......+ |+++|+++=+++-.++.......
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgprgirDE----------------------------- 298 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGPRGIRDE----------------------------- 298 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcccCCcch-----------------------------
Confidence 45689999999999999988877665 89999998665543332211100
Q ss_pred HHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC-CCeEEEecCCCccC
Q 020932 232 LMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP-NHKLHVVEGANHGY 291 (319)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~ 291 (319)
....++.|+|++.|.+|..++++..+++.+.+. ..+++++.+++|.+
T Consensus 299 -------------~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsm 346 (784)
T KOG3253|consen 299 -------------ALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSM 346 (784)
T ss_pred -------------hhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccc
Confidence 011348999999999999999999999998875 57899999999996
No 148
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.99 E-value=1e-07 Score=81.51 Aligned_cols=126 Identities=13% Similarity=0.136 Sum_probs=73.5
Q ss_pred EEEEEeCC-CCceEEEEEEeCC-----CceEEEEEccCCCCCCChhHHHHHHHHHHcCc----eEEEEcCCCCCCCCCCC
Q 020932 62 QELVIPNK-YGERLVGVLHDAE-----SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGI----SAFRFDFAGNGESEGSF 131 (319)
Q Consensus 62 ~~~~~~~~-dg~~l~~~~~~~~-----~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~----~v~~~d~~G~G~s~~~~ 131 (319)
+.+.+.+. -|.+..+++|.|. +.|+|+++||....... ......+.|...|. .++.+|..+.. ....
T Consensus 181 ~~~~~~S~~Lg~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~-~~~~~ld~li~~g~i~P~ivV~id~~~~~--~R~~ 257 (411)
T PRK10439 181 KEIIWKSERLGNSRRVWIYTTGDAAPEERPLAILLDGQFWAESM-PVWPALDSLTHRGQLPPAVYLLIDAIDTT--HRSQ 257 (411)
T ss_pred EEEEEEccccCCceEEEEEECCCCCCCCCCEEEEEECHHhhhcC-CHHHHHHHHHHcCCCCceEEEEECCCCcc--cccc
Confidence 44444432 2444555555542 35889999996533221 23455566766663 35677753211 1111
Q ss_pred CCCChHHH----HhHHHHHHHHHHh--CCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccc
Q 020932 132 QYGNYWRE----ADDLRAVVQYFCG--ANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRY 190 (319)
Q Consensus 132 ~~~~~~~~----~~d~~~~i~~l~~--~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 190 (319)
.......+ .+++.-.|+.... .+.++.+|.|+||||..|+.++.++|+ +.+++.++|.+
T Consensus 258 el~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 258 ELPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred cCCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 11111222 2344444433211 155678999999999999999999999 99999999865
No 149
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.97 E-value=5.7e-09 Score=79.98 Aligned_cols=230 Identities=12% Similarity=0.124 Sum_probs=126.8
Q ss_pred EEEeCCCceEEEEEccCCCCCCChhH-HHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhH-----------HH
Q 020932 77 VLHDAESSEIVVLCHGFRSTKDDPSM-VNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADD-----------LR 144 (319)
Q Consensus 77 ~~~~~~~~~~vv~~hG~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d-----------~~ 144 (319)
++.+.+..+.-|.+-|-|.+.. .- ..+.+.+.++|...+.+.-|-+|+...+......-..+.| ..
T Consensus 106 ~liPQK~~~KOG~~a~tgdh~y--~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~ 183 (371)
T KOG1551|consen 106 WLIPQKMADLCLSWALTGDHVY--TRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFV 183 (371)
T ss_pred eecccCcCCeeEEEeecCCcee--EeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3444445666677767676652 22 2466777888899999999999988765432222222222 22
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhch--HHHHHhhhc-cccccccCC
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGK--DYMEKIMQD-GFIDVKNKT 220 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~ 220 (319)
.++.|-...+..++.++|-||||.+|......++. |.-+=++++...........+.. ..+.+..+. .+.....+.
T Consensus 184 ~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~ 263 (371)
T KOG1551|consen 184 KLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRN 263 (371)
T ss_pred HhcccccccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhC
Confidence 33333222377899999999999999998887776 44443333322111111111111 111111110 000000111
Q ss_pred Ccceee--------eehhhHHhhhccch--hhhhhhc--cCC-CcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCC
Q 020932 221 GDVEYR--------VTEESLMDRLNTNM--HDACLQI--DME-CSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGA 287 (319)
Q Consensus 221 ~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~--~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (319)
....+. ....+....+..-+ ....... .++ --+.++.+++|..+|......+.+..|++++..++ +
T Consensus 264 p~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-g 342 (371)
T KOG1551|consen 264 PAQSYHLLSKEQSRNSRKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-G 342 (371)
T ss_pred chhhHHHHHHHhhhcchHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCCCEEEEee-c
Confidence 100000 00011111111000 0011111 111 22778889999999999999999999999999999 6
Q ss_pred Ccc--CcccHHHHHHHHHHHHHhh
Q 020932 288 NHG--YTNHQAELVSVVLDFVKAS 309 (319)
Q Consensus 288 gH~--~~~~~~~~~~~i~~fl~~~ 309 (319)
||. ++...+.+.++|.+-|++.
T Consensus 343 GHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 343 GHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred CceeeeehhchHHHHHHHHHHHhh
Confidence 999 3567788999999988774
No 150
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.96 E-value=4.4e-07 Score=69.31 Aligned_cols=218 Identities=16% Similarity=0.178 Sum_probs=121.4
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHc-C--ceEEEEcCCCCCCCC---CC------CCCCChHHHHhHHHHHHHHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-G--ISAFRFDFAGNGESE---GS------FQYGNYWREADDLRAVVQYF 150 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G--~~v~~~d~~G~G~s~---~~------~~~~~~~~~~~d~~~~i~~l 150 (319)
+++.|++++|..|.. .+|..++..|... + ..++.+...||-.-+ .. ....+.+++++-=.++++.-
T Consensus 28 ~~~li~~IpGNPG~~--gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLL--GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CceEEEEecCCCCch--hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 688999999999998 6789999888655 2 448888888885433 11 12234444444444444433
Q ss_pred HhCCCceEEEEEEehhHHHHHHHHhhc-CC--ccEEEEEeccccc----ccchh-------------------hhhchHH
Q 020932 151 CGANRAVGAILGHSKGGSVVLLYASKY-ND--IRTFVNVSGRYDL----KGGIE-------------------DRLGKDY 204 (319)
Q Consensus 151 ~~~~~~~i~l~G~S~Gg~~a~~~a~~~-p~--v~~~v~~~~~~~~----~~~~~-------------------~~~~~~~ 204 (319)
.- ...+++++|||.|+++.+.++... ++ |.+++++-|.... +.+.. -.....+
T Consensus 106 ~P-k~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ 184 (301)
T KOG3975|consen 106 VP-KDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGF 184 (301)
T ss_pred CC-CCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHH
Confidence 22 345799999999999999988744 33 7788877663210 00000 0001111
Q ss_pred HHHhhhccccccccCCCc---ceeeeehhhHHhh-----------hccchhhhhhhccCCCcEEEEecCCCCccCcchHH
Q 020932 205 MEKIMQDGFIDVKNKTGD---VEYRVTEESLMDR-----------LNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAH 270 (319)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 270 (319)
.+.+.-.......+.... ...........+. ......... .+..+-+.+.+|.+|..||.+...
T Consensus 185 ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~--een~d~l~Fyygt~DgW~p~~~~d 262 (301)
T KOG3975|consen 185 IRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYC--EENLDSLWFYYGTNDGWVPSHYYD 262 (301)
T ss_pred HHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHH--HhcCcEEEEEccCCCCCcchHHHH
Confidence 111111000000000000 0000111111110 000001111 122678899999999999999999
Q ss_pred HHHhhCCCC--eEEEecCCCccCc-ccHHHHHHHHHHHH
Q 020932 271 EFDKIIPNH--KLHVVEGANHGYT-NHQAELVSVVLDFV 306 (319)
Q Consensus 271 ~~~~~~~~~--~~~~~~~~gH~~~-~~~~~~~~~i~~fl 306 (319)
.+.+.+|.. ++-+ ++..|.+. .+.+.++..+.+.+
T Consensus 263 ~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 263 YYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred HHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 999999864 4444 67899975 44566666666654
No 151
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.95 E-value=5.1e-09 Score=82.55 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=82.8
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEe
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 164 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 164 (319)
|++.++|+.++.. +.|..++..|... ..|+.++.||.+.. .....+++++++...+.|..++ +..++.|+|||
T Consensus 1 ~pLF~fhp~~G~~--~~~~~L~~~l~~~-~~v~~l~a~g~~~~--~~~~~~l~~~a~~yv~~Ir~~Q--P~GPy~L~G~S 73 (257)
T COG3319 1 PPLFCFHPAGGSV--LAYAPLAAALGPL-LPVYGLQAPGYGAG--EQPFASLDDMAAAYVAAIRRVQ--PEGPYVLLGWS 73 (257)
T ss_pred CCEEEEcCCCCcH--HHHHHHHHHhccC-ceeeccccCccccc--ccccCCHHHHHHHHHHHHHHhC--CCCCEEEEeec
Confidence 5789999999998 6799999999988 99999999999862 3344577888887777777665 44579999999
Q ss_pred hhHHHHHHHHhhcC---C-ccEEEEEecccc
Q 020932 165 KGGSVVLLYASKYN---D-IRTFVNVSGRYD 191 (319)
Q Consensus 165 ~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~ 191 (319)
+||.+|..+|.+.. + |..++++++...
T Consensus 74 ~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 74 LGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999988752 2 999999998776
No 152
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.94 E-value=4.6e-09 Score=89.73 Aligned_cols=91 Identities=16% Similarity=0.181 Sum_probs=74.0
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcC
Q 020932 100 PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 100 ~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p 178 (319)
..|..+++.|.+.||.+ ..|++|+|.+.... ...+...+++.+.++.+.+. +..+++|+||||||.++..++..+|
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~--~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQS--NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCCCCcccc--ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCC
Confidence 57999999999999855 88999999876542 22456678888888877655 6678999999999999999998877
Q ss_pred C-----ccEEEEEecccccc
Q 020932 179 D-----IRTFVNVSGRYDLK 193 (319)
Q Consensus 179 ~-----v~~~v~~~~~~~~~ 193 (319)
+ |+++|.++++..-.
T Consensus 185 ~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 185 DVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred HhHHhHhccEEEECCCCCCC
Confidence 4 89999998876543
No 153
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.94 E-value=1.4e-08 Score=79.94 Aligned_cols=106 Identities=16% Similarity=0.255 Sum_probs=73.9
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC------C---CC---C---------CCC------
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE------G---SF---Q---------YGN------ 135 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~------~---~~---~---------~~~------ 135 (319)
+-|.|||-||+|++. ..|..+.-.|+.+||-|.++++|.+..+- . +. . ...
T Consensus 117 k~PvvvFSHGLggsR--t~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSR--TLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CccEEEEecccccch--hhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 458999999999999 67999999999999999999998765331 0 00 0 000
Q ss_pred --hHHHHhHHHHHHHHHHhC------------------------CCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecc
Q 020932 136 --YWREADDLRAVVQYFCGA------------------------NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGR 189 (319)
Q Consensus 136 --~~~~~~d~~~~i~~l~~~------------------------~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~ 189 (319)
...-+++...+++-+.+. +..++.++|||+||..++...+.+.++++.|+.+++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~W 274 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeee
Confidence 011123333333333221 233588999999999999888887789999998875
Q ss_pred c
Q 020932 190 Y 190 (319)
Q Consensus 190 ~ 190 (319)
.
T Consensus 275 M 275 (399)
T KOG3847|consen 275 M 275 (399)
T ss_pred e
Confidence 4
No 154
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.90 E-value=2.1e-09 Score=88.73 Aligned_cols=109 Identities=14% Similarity=0.188 Sum_probs=67.5
Q ss_pred CceEEEEEccCCCCC-CChhHHHHHHHHHH---cCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC---CC
Q 020932 83 SSEIVVLCHGFRSTK-DDPSMVNLAVALQN---EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NR 155 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~-~~~~~~~~~~~l~~---~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~ 155 (319)
++|++|++|||.++. .......+.+.|.. .+++|+++|+...-...-...........+.+..+|+.|... ..
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~ 149 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPP 149 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---G
T ss_pred CCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCCh
Confidence 689999999999988 43345566665544 479999999952211000000001122345566677777632 67
Q ss_pred ceEEEEEEehhHHHHHHHHhhcCC---ccEEEEEecccc
Q 020932 156 AVGAILGHSKGGSVVLLYASKYND---IRTFVNVSGRYD 191 (319)
Q Consensus 156 ~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~ 191 (319)
++++|+|||+||.+|-.++..... |..++.++|...
T Consensus 150 ~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 150 ENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp GGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred hHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 899999999999999998877654 999999998654
No 155
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.85 E-value=1.6e-07 Score=81.55 Aligned_cols=226 Identities=14% Similarity=0.074 Sum_probs=137.4
Q ss_pred ccccceEEEEEeCCCCceEEEEEEe------CCCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCC
Q 020932 56 NLAVKQQELVIPNKYGERLVGVLHD------AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEG 129 (319)
Q Consensus 56 ~~~~~~~~~~~~~~dg~~l~~~~~~------~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~ 129 (319)
+..+..+++.++..||.++.+.+.- .++.|++|+.-|.-+.+....+....-.|.++|+.....-.||-|+-..
T Consensus 414 p~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~ 493 (682)
T COG1770 414 PEDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGR 493 (682)
T ss_pred hhHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccCh
Confidence 3567889999998999988875432 2467888887776555533345555556789998877778888775442
Q ss_pred CCC-CCCh---HHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhc
Q 020932 130 SFQ-YGNY---WREADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLG 201 (319)
Q Consensus 130 ~~~-~~~~---~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~ 201 (319)
..- .... ..-..|..++.++|.++ ..+.++++|-|.||++.-..+...|+ ++++|+-.|..+....+....-
T Consensus 494 ~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~sl 573 (682)
T COG1770 494 AWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSL 573 (682)
T ss_pred HHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCC
Confidence 110 0000 11257888888888877 45689999999999999999999999 9999999998776544322110
Q ss_pred hHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC----
Q 020932 202 KDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP---- 277 (319)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~---- 277 (319)
+.. ...+ ........++...-............ +.-.|+|++.|.+|+.|......++...+.
T Consensus 574 PLT-----~~E~-------~EWGNP~d~e~y~yikSYSPYdNV~a-~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~t 640 (682)
T COG1770 574 PLT-----VTEW-------DEWGNPLDPEYYDYIKSYSPYDNVEA-QPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKT 640 (682)
T ss_pred CCC-----ccch-------hhhCCcCCHHHHHHHhhcCchhcccc-CCCCceEEEccccCCccccchHHHHHHHHhhccc
Confidence 000 0000 00011111121111112222222222 224689999999999998766666655543
Q ss_pred CCe---EEEecCCCccCccc
Q 020932 278 NHK---LHVVEGANHGYTNH 294 (319)
Q Consensus 278 ~~~---~~~~~~~gH~~~~~ 294 (319)
+.. +.+=-++||.-...
T Consensus 641 d~~plLlkt~M~aGHgG~Sg 660 (682)
T COG1770 641 DGNPLLLKTNMDAGHGGASG 660 (682)
T ss_pred CCCcEEEEecccccCCCCCC
Confidence 222 22213689985433
No 156
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.84 E-value=1.3e-07 Score=78.04 Aligned_cols=106 Identities=17% Similarity=0.233 Sum_probs=73.5
Q ss_pred CceEEEEEccCCCCCCC-----hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHH-hCCCc
Q 020932 83 SSEIVVLCHGFRSTKDD-----PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFC-GANRA 156 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~-----~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~-~~~~~ 156 (319)
+.|+||++||+|-.... .....+...|. ...++++|+.-... ......+..+..++.+..++|. +.+.+
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~---~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSS---DEHGHKYPTQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecccccc---ccCCCcCchHHHHHHHHHHHHHhccCCC
Confidence 46999999999865532 11223333444 35899999864320 0112345566778888888887 56888
Q ss_pred eEEEEEEehhHHHHHHHHhhcC---C---ccEEEEEecccccc
Q 020932 157 VGAILGHSKGGSVVLLYASKYN---D---IRTFVNVSGRYDLK 193 (319)
Q Consensus 157 ~i~l~G~S~Gg~~a~~~a~~~p---~---v~~~v~~~~~~~~~ 193 (319)
+|+|+|-|.||.+++.++.... . -+++|+++|+....
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 9999999999999987765431 1 68999999988765
No 157
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.83 E-value=4.9e-08 Score=78.59 Aligned_cols=111 Identities=20% Similarity=0.153 Sum_probs=63.2
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcC----ceEEEEcCCCCCCCCC-----------CCCCCChHHHHhHH-HHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEG----ISAFRFDFAGNGESEG-----------SFQYGNYWREADDL-RAV 146 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~~G~G~s~~-----------~~~~~~~~~~~~d~-~~~ 146 (319)
+-|+|+++||..............+.+...| ..+++++..+.+.... .........+.+.+ .++
T Consensus 23 ~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~el 102 (251)
T PF00756_consen 23 PYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEEL 102 (251)
T ss_dssp TEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTHH
T ss_pred CCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhccc
Confidence 5689999999822111111223344444443 3456666555441110 01111112222222 244
Q ss_pred HHHHHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccc
Q 020932 147 VQYFCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK 193 (319)
Q Consensus 147 i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 193 (319)
+.++.++ ..++..|.|+||||..|+.++.++|+ +.++++++|.+...
T Consensus 103 ~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 103 IPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred hhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 4444443 22238999999999999999999999 99999999876554
No 158
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.80 E-value=9.1e-07 Score=74.97 Aligned_cols=86 Identities=15% Similarity=0.169 Sum_probs=59.8
Q ss_pred HHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC--CCceEEEEEEehhHHHHHHHHhhcCC-
Q 020932 103 VNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND- 179 (319)
Q Consensus 103 ~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~- 179 (319)
..+...|. .|+.|+.+.+. ..+....++.+......++++.+... +..+.+|+|.|.||..++.+|+.+|+
T Consensus 91 SevG~AL~-~GHPvYFV~F~-----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~ 164 (581)
T PF11339_consen 91 SEVGVALR-AGHPVYFVGFF-----PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDL 164 (581)
T ss_pred cHHHHHHH-cCCCeEEEEec-----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCc
Confidence 34455554 48999988764 11223345555555566666666655 23489999999999999999999999
Q ss_pred ccEEEEEeccccccc
Q 020932 180 IRTFVNVSGRYDLKG 194 (319)
Q Consensus 180 v~~~v~~~~~~~~~~ 194 (319)
+.-+|+-+++.+.+.
T Consensus 165 ~gplvlaGaPlsywa 179 (581)
T PF11339_consen 165 VGPLVLAGAPLSYWA 179 (581)
T ss_pred cCceeecCCCccccc
Confidence 777777776665544
No 159
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.77 E-value=9.3e-07 Score=76.79 Aligned_cols=125 Identities=18% Similarity=0.127 Sum_probs=80.6
Q ss_pred EEeCCCCceEEEEEEeCC----CceEEEEEccCCCCCCChhHHHHHHH-------------------HHHcCceEEEEcC
Q 020932 65 VIPNKYGERLVGVLHDAE----SSEIVVLCHGFRSTKDDPSMVNLAVA-------------------LQNEGISAFRFDF 121 (319)
Q Consensus 65 ~~~~~dg~~l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~~~-------------------l~~~G~~v~~~d~ 121 (319)
.+....+..+.+|+++.. ++|.||++.|..+++ .++..+.+. +.+. .+++.+|.
T Consensus 17 ~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~S--S~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~ 93 (415)
T PF00450_consen 17 PVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCS--SMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQ 93 (415)
T ss_dssp EECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB---THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--
T ss_pred ecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceec--cccccccccCceEEeecccccccccccccccc-cceEEEee
Confidence 444446788999888753 679999999998887 344333221 2333 67999995
Q ss_pred C-CCCCCCCCCCC---CChHHHHhHHHHHHHHHHhC----CCceEEEEEEehhHHHHHHHHhh----c-----CC--ccE
Q 020932 122 A-GNGESEGSFQY---GNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASK----Y-----ND--IRT 182 (319)
Q Consensus 122 ~-G~G~s~~~~~~---~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~----~-----p~--v~~ 182 (319)
| |.|.|...... .+.++.++|+..+|+..-.+ ...+++|.|.|+||..+-.+|.. . +. +++
T Consensus 94 PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkG 173 (415)
T PF00450_consen 94 PVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKG 173 (415)
T ss_dssp STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEE
T ss_pred cCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccc
Confidence 5 89998765533 25567778888888665554 34589999999999876655543 2 13 899
Q ss_pred EEEEeccccc
Q 020932 183 FVNVSGRYDL 192 (319)
Q Consensus 183 ~v~~~~~~~~ 192 (319)
+++.+|..+.
T Consensus 174 i~IGng~~dp 183 (415)
T PF00450_consen 174 IAIGNGWIDP 183 (415)
T ss_dssp EEEESE-SBH
T ss_pred ceecCccccc
Confidence 9999886654
No 160
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.76 E-value=1.8e-06 Score=64.93 Aligned_cols=108 Identities=16% Similarity=0.139 Sum_probs=79.1
Q ss_pred CceEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCC-CceEEE
Q 020932 83 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGAN-RAVGAI 160 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~-~~~i~l 160 (319)
.+..|||+-|++..--. .+...+...|-+.+|..+.+.++.+-. .....++.+.++|+..+++++...+ -.+|+|
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~---G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYN---GYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccc---ccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 45679999999876522 345788899999999999988763211 1122345666899999999876542 347999
Q ss_pred EEEehhHHHHHHHHhhc--CC-ccEEEEEecccccc
Q 020932 161 LGHSKGGSVVLLYASKY--ND-IRTFVNVSGRYDLK 193 (319)
Q Consensus 161 ~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~~~ 193 (319)
+|||-|+.-.+.++... ++ +.+.|+.+|..+..
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999888887443 44 88889988877655
No 161
>PLN02606 palmitoyl-protein thioesterase
Probab=98.76 E-value=3.1e-06 Score=67.75 Aligned_cols=104 Identities=20% Similarity=0.191 Sum_probs=68.7
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCCCC-CChHHHHhHHHHHHHHHHhCCCceEEE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQY-GNYWREADDLRAVVQYFCGANRAVGAI 160 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~-~~~~~~~~d~~~~i~~l~~~~~~~i~l 160 (319)
...|||+.||+|.+..+..+..+.+.+.+. |+.+.++. .|-+. .... ....++++.+.+.+....... +-+.+
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~-~G~na 99 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELS-EGYNI 99 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhc-CceEE
Confidence 345799999999555434577888887533 67666655 23221 1112 344555666666555533222 24899
Q ss_pred EEEehhHHHHHHHHhhcCC---ccEEEEEecccc
Q 020932 161 LGHSKGGSVVLLYASKYND---IRTFVNVSGRYD 191 (319)
Q Consensus 161 ~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~ 191 (319)
+|+|.||.++-.++.+.|+ |+.+|.++++-.
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 9999999999999988754 999999987543
No 162
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.74 E-value=5.1e-08 Score=77.80 Aligned_cols=209 Identities=15% Similarity=0.080 Sum_probs=111.8
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC---CCceEEEEE
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NRAVGAILG 162 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G 162 (319)
++|++=||.+... .......+...+.|++++.+-.+-....... ......+..+++.+.+. +..++.+-.
T Consensus 1 plvvl~gW~gA~~-~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~~~il~H~ 73 (240)
T PF05705_consen 1 PLVVLLGWMGAKP-KHLAKYSDLYQDPGFDILLVTSPPADFFWPS------KRLAPAADKLLELLSDSQSASPPPILFHS 73 (240)
T ss_pred CEEEEEeCCCCCH-HHHHHHHHHHHhcCCeEEEEeCCHHHHeeec------cchHHHHHHHHHHhhhhccCCCCCEEEEE
Confidence 3566667776554 4566777777779999999876532111111 12223333444444443 223799999
Q ss_pred EehhHHHHHHHHhh-----------cCCccEEEEEeccccccc-chhhh----hchH----H--HHHhhhccccccccCC
Q 020932 163 HSKGGSVVLLYASK-----------YNDIRTFVNVSGRYDLKG-GIEDR----LGKD----Y--MEKIMQDGFIDVKNKT 220 (319)
Q Consensus 163 ~S~Gg~~a~~~a~~-----------~p~v~~~v~~~~~~~~~~-~~~~~----~~~~----~--~~~~~~~~~~~~~~~~ 220 (319)
+|.||...+..... .|.++++|+-+++..... ..... +... + ...+............
T Consensus 74 FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (240)
T PF05705_consen 74 FSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLSIISY 153 (240)
T ss_pred EECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99988776654431 122888888777643221 11000 0000 0 0000000000000000
Q ss_pred CcceeeeehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC----CCeEEEecCCCccCc--cc
Q 020932 221 GDVEYRVTEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGANHGYT--NH 294 (319)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~--~~ 294 (319)
.............. ...........+|-|+++++.|.+++.+..++..+... +++...++++.|.-+ .+
T Consensus 154 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~ 228 (240)
T PF05705_consen 154 FIFGYPDVQEYYRR-----ALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKH 228 (240)
T ss_pred HHhcCCcHHHHHHH-----HHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccC
Confidence 00000000000000 01111222447899999999999999988877765543 367788899999954 67
Q ss_pred HHHHHHHHHHHH
Q 020932 295 QAELVSVVLDFV 306 (319)
Q Consensus 295 ~~~~~~~i~~fl 306 (319)
++++++.+.+|+
T Consensus 229 p~~Y~~~v~~fw 240 (240)
T PF05705_consen 229 PDRYWRAVDEFW 240 (240)
T ss_pred HHHHHHHHHhhC
Confidence 899999998874
No 163
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.70 E-value=1.6e-07 Score=73.97 Aligned_cols=109 Identities=18% Similarity=0.280 Sum_probs=75.2
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCc--eEEEEcCCCCCCCCCC-CCCCChHHHHhHHHHHHHHHHhC-CCce
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGI--SAFRFDFAGNGESEGS-FQYGNYWREADDLRAVVQYFCGA-NRAV 157 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~--~v~~~d~~G~G~s~~~-~~~~~~~~~~~d~~~~i~~l~~~-~~~~ 157 (319)
.++..+||+||+..+.+. -....++....-|+ .++.+.+|..|....- ....+......++..+|+.+... +..+
T Consensus 16 ~~~~vlvfVHGyn~~f~~-a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFED-ALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCeEEEEEeCCCCCHHH-HHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 467899999999998743 23344444333344 6999999988763221 11123334467788888888777 7889
Q ss_pred EEEEEEehhHHHHHHHHhhc----C------CccEEEEEecccc
Q 020932 158 GAILGHSKGGSVVLLYASKY----N------DIRTFVNVSGRYD 191 (319)
Q Consensus 158 i~l~G~S~Gg~~a~~~a~~~----p------~v~~~v~~~~~~~ 191 (319)
|+|++||||+.+.+.+.... + .+..+|+++|-.+
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 99999999999988876542 1 1678888887544
No 164
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.68 E-value=4.7e-06 Score=69.27 Aligned_cols=166 Identities=15% Similarity=0.177 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHhC---CC--ceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHH--HHhhhcc
Q 020932 141 DDLRAVVQYFCGA---NR--AVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYM--EKIMQDG 212 (319)
Q Consensus 141 ~d~~~~i~~l~~~---~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 212 (319)
-|+..++..+... .. -+++++|+|.||++|...|.-.|. +++++=-+++.... +.-.+++... +......
T Consensus 164 iD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~--l~~I~Gre~~~~~y~~~~~ 241 (403)
T PF11144_consen 164 IDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPP--LRYIFGREIDFMKYICSGE 241 (403)
T ss_pred HHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccch--hheeeeeecCccccccccc
Confidence 4555555555554 22 379999999999999999998898 77777655543321 1111211110 0000000
Q ss_pred ------------ccccccCCCcceeeeehh-hHH-hhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC-
Q 020932 213 ------------FIDVKNKTGDVEYRVTEE-SLM-DRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP- 277 (319)
Q Consensus 213 ------------~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~- 277 (319)
....+.......+.+... ... ..+..+..........++-.+..|+..|..+|.+.-+++++.+.
T Consensus 242 ~~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~ 321 (403)
T PF11144_consen 242 FFNFKNIRIYCFDKTFWTRNKNSPYYFSKARYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKN 321 (403)
T ss_pred ccccCCEEEEEEeccccccCCCCccccChHHHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHH
Confidence 001111111112222221 222 22222222222222235667788999999999999888887664
Q ss_pred ---CCeEEEec-----------CCCccCc-ccHHHHHHHHHHHHHh
Q 020932 278 ---NHKLHVVE-----------GANHGYT-NHQAELVSVVLDFVKA 308 (319)
Q Consensus 278 ---~~~~~~~~-----------~~gH~~~-~~~~~~~~~i~~fl~~ 308 (319)
+++++.+. +..|..- ....-+.+.+-..+++
T Consensus 322 lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~lek 367 (403)
T PF11144_consen 322 LGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLEK 367 (403)
T ss_pred cCCCeEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHHH
Confidence 57777772 4567743 3333344444444444
No 165
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.66 E-value=1.2e-05 Score=64.58 Aligned_cols=105 Identities=18% Similarity=0.219 Sum_probs=71.4
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAI 160 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l 160 (319)
....++|+.||+|.+..+.-...+.+.+.+. |..+.++.. | .+....-.....++++.+.+.+....... +-+.+
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g--~~~~~s~~~~~~~Qve~vce~l~~~~~l~-~G~na 98 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-G--NGVGDSWLMPLTQQAEIACEKVKQMKELS-QGYNI 98 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-C--CCccccceeCHHHHHHHHHHHHhhchhhh-CcEEE
Confidence 3455799999999887654566777777553 677777764 2 22211122344566666666665533322 23999
Q ss_pred EEEehhHHHHHHHHhhcCC---ccEEEEEeccc
Q 020932 161 LGHSKGGSVVLLYASKYND---IRTFVNVSGRY 190 (319)
Q Consensus 161 ~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~ 190 (319)
+|+|.||.++-.++.+.|+ |+.+|.++++-
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 9999999999999988764 99999998754
No 166
>COG3150 Predicted esterase [General function prediction only]
Probab=98.65 E-value=3.8e-06 Score=60.24 Aligned_cols=184 Identities=16% Similarity=0.211 Sum_probs=97.9
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehh
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKG 166 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~G 166 (319)
||++||+.++..+.--.-+.+.+... ...+.+-.| .. ........+.+..+|... +.+...|+|.|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i~y~~p-------~l-~h~p~~a~~ele~~i~~~---~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDIEYSTP-------HL-PHDPQQALKELEKAVQEL---GDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccceeeecC-------CC-CCCHHHHHHHHHHHHHHc---CCCCceEEeecch
Confidence 89999999988653223333444433 222222221 11 123455567777777766 4445899999999
Q ss_pred HHHHHHHHhhcCCccEEEEEecccccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhHHhhhccchhhhhhh
Q 020932 167 GSVVLLYASKYNDIRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESLMDRLNTNMHDACLQ 246 (319)
Q Consensus 167 g~~a~~~a~~~p~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (319)
|+.|.+++.+.. +++ |+++|.....+.+...++. ..+......+......+...-.....
T Consensus 70 GY~At~l~~~~G-ira-v~~NPav~P~e~l~gylg~-------------~en~ytg~~y~le~~hI~~l~~~~~~----- 129 (191)
T COG3150 70 GYYATWLGFLCG-IRA-VVFNPAVRPYELLTGYLGR-------------PENPYTGQEYVLESRHIATLCVLQFR----- 129 (191)
T ss_pred HHHHHHHHHHhC-Chh-hhcCCCcCchhhhhhhcCC-------------CCCCCCcceEEeehhhHHHHHHhhcc-----
Confidence 999999888753 433 4566655443333222111 00001111222222222221111110
Q ss_pred ccC-CCcEEEEecCC-CCccCcchHHHHHhhCCCCeEEEecCCCccCcccHHHHHHHHHHHHH
Q 020932 247 IDM-ECSVLTIHGSS-DKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVK 307 (319)
Q Consensus 247 ~~~-~~P~l~i~g~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~ 307 (319)
.+ +...+++.... |.+.+...+. +.+..+...+.+|+.|-+.. -....+.|..|..
T Consensus 130 -~l~~p~~~~lL~qtgDEvLDyr~a~---a~y~~~~~~V~dgg~H~F~~-f~~~l~~i~aF~g 187 (191)
T COG3150 130 -ELNRPRCLVLLSQTGDEVLDYRQAV---AYYHPCYEIVWDGGDHKFKG-FSRHLQRIKAFKG 187 (191)
T ss_pred -ccCCCcEEEeecccccHHHHHHHHH---HHhhhhhheeecCCCccccc-hHHhHHHHHHHhc
Confidence 11 23355555555 9887654443 44456677888898998742 3455667777764
No 167
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.64 E-value=4.2e-07 Score=67.65 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=68.9
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHH-HHcCceEEEEcCCCCC-----CCCC--------C----------CCCCChHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVAL-QNEGISAFRFDFAGNG-----ESEG--------S----------FQYGNYWR 138 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l-~~~G~~v~~~d~~G~G-----~s~~--------~----------~~~~~~~~ 138 (319)
+-|++.++.|+.++.+++.-+.-.+.. .++|+.|+.+|-.-.| +.+. - ..+.-++.
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 358999999999999874444444443 5569999999864332 2210 0 00111222
Q ss_pred HHhHHHHHHHH-HHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccccc
Q 020932 139 EADDLRAVVQY-FCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDL 192 (319)
Q Consensus 139 ~~~d~~~~i~~-l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~ 192 (319)
.++++.+.+.. ....+..++.+.||||||.-|+..+.+.|. .+++-..+|..+.
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 23344444431 111156679999999999999998888887 7777777765543
No 168
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.61 E-value=2e-06 Score=67.14 Aligned_cols=95 Identities=18% Similarity=0.079 Sum_probs=64.7
Q ss_pred EEccCC--CCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehh
Q 020932 89 LCHGFR--STKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKG 166 (319)
Q Consensus 89 ~~hG~~--~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~G 166 (319)
++|+.+ ++. ..|..+...|... +.|+.++++|++.+.... .+++..++.+...+... ....+++++|||+|
T Consensus 2 ~~~~~~~~~~~--~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~--~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~G 74 (212)
T smart00824 2 CFPSTAAPSGP--HEYARLAAALRGR-RDVSALPLPGFGPGEPLP--ASADALVEAQAEAVLRA--AGGRPFVLVGHSSG 74 (212)
T ss_pred ccCCCCCCCcH--HHHHHHHHhcCCC-ccEEEecCCCCCCCCCCC--CCHHHHHHHHHHHHHHh--cCCCCeEEEEECHH
Confidence 445544 333 4688888888764 899999999998655432 34455555444444322 13557999999999
Q ss_pred HHHHHHHHhhc---CC-ccEEEEEeccc
Q 020932 167 GSVVLLYASKY---ND-IRTFVNVSGRY 190 (319)
Q Consensus 167 g~~a~~~a~~~---p~-v~~~v~~~~~~ 190 (319)
|.++...+... +. +.+++++++..
T Consensus 75 g~~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 75 GLLAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 99998888764 33 88888887643
No 169
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.59 E-value=2.9e-07 Score=80.16 Aligned_cols=108 Identities=17% Similarity=0.128 Sum_probs=70.9
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCC-------CCCChHHHHhHHHHHHHHHHhC--
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSF-------QYGNYWREADDLRAVVQYFCGA-- 153 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~d~~~~i~~l~~~-- 153 (319)
+|++|++-|=+.-...+....+...|+++ |-.++++++|.+|.|.+.. .+.+.++..+|+..++++++.+
T Consensus 29 gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~ 108 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYN 108 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhc
Confidence 77777775544322111223345555554 7789999999999997532 3456688899999999999854
Q ss_pred --CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccc
Q 020932 154 --NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYD 191 (319)
Q Consensus 154 --~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~ 191 (319)
...+++++|-|+||.+|..+-.++|+ |.+.+..+++..
T Consensus 109 ~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 109 TAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred CCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 34489999999999999999999999 899998887653
No 170
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.56 E-value=4.8e-06 Score=68.64 Aligned_cols=221 Identities=20% Similarity=0.217 Sum_probs=118.7
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC----------CCCCChHHH---HhHHHHHHHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS----------FQYGNYWRE---ADDLRAVVQY 149 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~----------~~~~~~~~~---~~d~~~~i~~ 149 (319)
+-|.+++.||++...+. ....+..++..++.++..+....|.+... ......... ..++...-..
T Consensus 48 ~~p~v~~~h~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQ--SLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYR 125 (299)
T ss_pred cCceEEeccCccccccC--cchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHH
Confidence 45789999999999864 23377888888888887775333222211 100000000 0111111111
Q ss_pred HHhCCCceEEEEEEehhHHHHHHHHhhcC---CccEEEEEecccccccchhhhh-----chHHHHHhhhc-cccccccCC
Q 020932 150 FCGANRAVGAILGHSKGGSVVLLYASKYN---DIRTFVNVSGRYDLKGGIEDRL-----GKDYMEKIMQD-GFIDVKNKT 220 (319)
Q Consensus 150 l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v~~~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~ 220 (319)
.......+....|+++|+..+..++...+ +...++.+.............. .......+... .+... ..
T Consensus 126 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 203 (299)
T COG1073 126 LLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELIDYLITPGGFAPL--PA 203 (299)
T ss_pred HHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhhhhccCCCCCCC--Cc
Confidence 11113357899999999999998888776 2444444443332222211111 11111111111 11111 00
Q ss_pred Cccee-eeehhhHHhhhccchhhhhhhccCC-CcEEEEecCCCCccCcchHHHHHhhCCC--CeEEEecCCCccCcc-c-
Q 020932 221 GDVEY-RVTEESLMDRLNTNMHDACLQIDME-CSVLTIHGSSDKIIPLQDAHEFDKIIPN--HKLHVVEGANHGYTN-H- 294 (319)
Q Consensus 221 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~P~l~i~g~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~-~- 294 (319)
..... ..... .......+...... .+. +|+|+++|.+|..+|...+..+++.... .+...+++++|.... .
T Consensus 204 ~~~~~~~~~~~-~~~~~~~d~~~~~~--~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~ 280 (299)
T COG1073 204 PEAPLDTLPLR-AVLLLLLDPFDDAE--KISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNP 280 (299)
T ss_pred ccccccccccc-hhhhccCcchhhHh--hcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCcc
Confidence 00000 00011 11122222222222 223 7999999999999999999999887765 578888999999652 2
Q ss_pred H--HHHHHHHHHHHHhhc
Q 020932 295 Q--AELVSVVLDFVKASL 310 (319)
Q Consensus 295 ~--~~~~~~i~~fl~~~~ 310 (319)
+ .+....+.+|+.+.+
T Consensus 281 ~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 281 PAVEQALDKLAEFLERHL 298 (299)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 2 378999999998865
No 171
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.53 E-value=3.5e-07 Score=77.20 Aligned_cols=124 Identities=12% Similarity=0.038 Sum_probs=80.5
Q ss_pred eCCCCceEEEEEEe-CC-CceEEEEEccCCCCCCC-hhHHHHHHHHHHcC-ceEEEEcCCC--CCCCC---CC-CCCCCh
Q 020932 67 PNKYGERLVGVLHD-AE-SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEG-ISAFRFDFAG--NGESE---GS-FQYGNY 136 (319)
Q Consensus 67 ~~~dg~~l~~~~~~-~~-~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G-~~v~~~d~~G--~G~s~---~~-~~~~~~ 136 (319)
.+.|+..|..|--. +. +.|++|+|||.+-...+ .....-...|+++| +-|+.+++|= .|.-. -. .....-
T Consensus 75 ~sEDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~ 154 (491)
T COG2272 75 GSEDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFAS 154 (491)
T ss_pred ccccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccc
Confidence 34577777755443 22 56999999998643321 11122346788887 8899999882 12111 11 011111
Q ss_pred HHHHhHHHHHHHHHHhC------CCceEEEEEEehhHHHHHHHHhhcCC----ccEEEEEecccc
Q 020932 137 WREADDLRAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKYND----IRTFVNVSGRYD 191 (319)
Q Consensus 137 ~~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~ 191 (319)
.--..|...+++|+++. ++++|.|+|+|.||+.++.+++. |. +.++|+.++...
T Consensus 155 n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 155 NLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 12357888899999886 67899999999999988887665 54 777788887664
No 172
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.50 E-value=1.1e-06 Score=77.98 Aligned_cols=121 Identities=17% Similarity=0.085 Sum_probs=77.1
Q ss_pred CCCCceEEEEEEe----CCCceEEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCC-C---CCCCCCCCCCCChH
Q 020932 68 NKYGERLVGVLHD----AESSEIVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFA-G---NGESEGSFQYGNYW 137 (319)
Q Consensus 68 ~~dg~~l~~~~~~----~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~-G---~G~s~~~~~~~~~~ 137 (319)
+.|...+..+.-. .++.|+||++||.+....+.... ....|+.. |+.|+.+++| | +..+.... ....
T Consensus 75 sEdcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~--~~~n 151 (493)
T cd00312 75 SEDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIE--LPGN 151 (493)
T ss_pred CCcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCCC--CCcc
Confidence 4567777654432 12468999999975433211111 23344444 3899999999 3 32222111 1112
Q ss_pred HHHhHHHHHHHHHHhC------CCceEEEEEEehhHHHHHHHHhhc--CC-ccEEEEEecccc
Q 020932 138 READDLRAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKY--ND-IRTFVNVSGRYD 191 (319)
Q Consensus 138 ~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~--p~-v~~~v~~~~~~~ 191 (319)
.-..|...+++|+++. +.++|.|+|+|.||..+..++... +. ++++|+.++...
T Consensus 152 ~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 152 YGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 2357888888888775 577999999999999988877763 23 888888887554
No 173
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.50 E-value=2.1e-06 Score=70.34 Aligned_cols=89 Identities=20% Similarity=0.195 Sum_probs=66.8
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEEEE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAIL 161 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~ 161 (319)
....-||+.|-|+-. ..-+.+++.|.++|+.|+.+|-.=+-.|. .+.++.++|+..+|++...+ +..++.|+
T Consensus 259 sd~~av~~SGDGGWr--~lDk~v~~~l~~~gvpVvGvdsLRYfW~~-----rtPe~~a~Dl~r~i~~y~~~w~~~~~~li 331 (456)
T COG3946 259 SDTVAVFYSGDGGWR--DLDKEVAEALQKQGVPVVGVDSLRYFWSE-----RTPEQIAADLSRLIRFYARRWGAKRVLLI 331 (456)
T ss_pred cceEEEEEecCCchh--hhhHHHHHHHHHCCCceeeeehhhhhhcc-----CCHHHHHHHHHHHHHHHHHhhCcceEEEE
Confidence 344567777777766 34688999999999999999964333333 34477799999999988876 88899999
Q ss_pred EEehhHHHHHHHHhhcC
Q 020932 162 GHSKGGSVVLLYASKYN 178 (319)
Q Consensus 162 G~S~Gg~~a~~~a~~~p 178 (319)
|+|+|+-+.-..-.+.|
T Consensus 332 GySfGADvlP~~~n~L~ 348 (456)
T COG3946 332 GYSFGADVLPFAYNRLP 348 (456)
T ss_pred eecccchhhHHHHHhCC
Confidence 99999987555444433
No 174
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.50 E-value=1.3e-06 Score=66.80 Aligned_cols=83 Identities=11% Similarity=0.142 Sum_probs=53.8
Q ss_pred CCCceEEEEEccCCCCCCChhHHHHHHHHHHcCce-EEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEE
Q 020932 81 AESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGIS-AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGA 159 (319)
Q Consensus 81 ~~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~ 159 (319)
...+..||+..|+|.+.. .+..+. ...+++ ++++|+|..- ++ . | + ...++|.
T Consensus 8 ~~~~~LilfF~GWg~d~~--~f~hL~---~~~~~D~l~~yDYr~l~----------~d--~-~-------~--~~y~~i~ 60 (213)
T PF04301_consen 8 RNGKELILFFAGWGMDPS--PFSHLI---LPENYDVLICYDYRDLD----------FD--F-D-------L--SGYREIY 60 (213)
T ss_pred cCCCeEEEEEecCCCChH--Hhhhcc---CCCCccEEEEecCcccc----------cc--c-c-------c--ccCceEE
Confidence 334679999999999873 343331 123465 4577887211 11 0 1 1 1567899
Q ss_pred EEEEehhHHHHHHHHhhcCCccEEEEEecccc
Q 020932 160 ILGHSKGGSVVLLYASKYNDIRTFVNVSGRYD 191 (319)
Q Consensus 160 l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~ 191 (319)
|+|+|||-.+|..+.... .++..|.+++...
T Consensus 61 lvAWSmGVw~A~~~l~~~-~~~~aiAINGT~~ 91 (213)
T PF04301_consen 61 LVAWSMGVWAANRVLQGI-PFKRAIAINGTPY 91 (213)
T ss_pred EEEEeHHHHHHHHHhccC-CcceeEEEECCCC
Confidence 999999999998876653 4777788877543
No 175
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.50 E-value=7.8e-07 Score=69.54 Aligned_cols=90 Identities=18% Similarity=0.203 Sum_probs=49.1
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHH-HHHHhCC--Cce
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVV-QYFCGAN--RAV 157 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i-~~l~~~~--~~~ 157 (319)
+.-.||++||+.++. ..|..+.+.|... .+.-..+...++.... .....+++...+.+.+-| +.+.... ..+
T Consensus 3 ~~hLvV~vHGL~G~~--~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~-~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNP--ADMRYLKNHLEKIPEDLPNARIVVLGYSNNE-FKTFDGIDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCH--HHHHHHHHHHHHhhhhcchhhhhhhcccccc-cccchhhHHHHHHHHHHHHHhcccccccccc
Confidence 345799999999998 4577777776651 1221122222221111 112233444444443333 3222222 348
Q ss_pred EEEEEEehhHHHHHHHHh
Q 020932 158 GAILGHSKGGSVVLLYAS 175 (319)
Q Consensus 158 i~l~G~S~Gg~~a~~~a~ 175 (319)
|.++||||||.++-.+..
T Consensus 80 IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALG 97 (217)
T ss_pred ceEEEecccHHHHHHHHH
Confidence 999999999999866544
No 176
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.49 E-value=1.2e-05 Score=62.41 Aligned_cols=102 Identities=22% Similarity=0.332 Sum_probs=71.3
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEE
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGH 163 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~ 163 (319)
.++|++||++++..+.....+.+.+.+. |..|+++|. |.| ..........++++-+.+.+....+. ..-+.++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g--~~~s~l~pl~~Qv~~~ce~v~~m~~l-sqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG--IKDSSLMPLWEQVDVACEKVKQMPEL-SQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC--cchhhhccHHHHHHHHHHHHhcchhc-cCceEEEEE
Confidence 5789999999988654567777777766 888999996 334 11112233455555555555533332 233899999
Q ss_pred ehhHHHHHHHHhhcCC--ccEEEEEeccc
Q 020932 164 SKGGSVVLLYASKYND--IRTFVNVSGRY 190 (319)
Q Consensus 164 S~Gg~~a~~~a~~~p~--v~~~v~~~~~~ 190 (319)
|.||.++-.++...++ |+..|.++++-
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 9999999988877765 99999998754
No 177
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.40 E-value=2.8e-06 Score=68.98 Aligned_cols=109 Identities=17% Similarity=0.301 Sum_probs=78.1
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCce--EEEEcCCCCCCCCC-CCCCCChHHHHhHHHHHHHHHHhC-CCce
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGIS--AFRFDFAGNGESEG-SFQYGNYWREADDLRAVVQYFCGA-NRAV 157 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~--v~~~d~~G~G~s~~-~~~~~~~~~~~~d~~~~i~~l~~~-~~~~ 157 (319)
..+..+||+||+..+-+. --...++...+.|+. .+.+.+|..|.--+ ..+..+...-..++..+|+.|... ..++
T Consensus 114 ~~k~vlvFvHGfNntf~d-av~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFED-AVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCCchhH-HHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 367799999999988764 345667777776654 77888886665321 112233344568899999999887 4789
Q ss_pred EEEEEEehhHHHHHHHHhhc--------CC-ccEEEEEecccc
Q 020932 158 GAILGHSKGGSVVLLYASKY--------ND-IRTFVNVSGRYD 191 (319)
Q Consensus 158 i~l~G~S~Gg~~a~~~a~~~--------p~-v~~~v~~~~~~~ 191 (319)
|+|++||||.++++..+.+. +. |+-+|+.+|-.+
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 99999999999998866542 12 778888887544
No 178
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.37 E-value=3.9e-06 Score=75.43 Aligned_cols=122 Identities=12% Similarity=0.001 Sum_probs=72.4
Q ss_pred CCCCceEEEEEEeCC----CceEEEEEccCCCCCCCh--hHHHHHHHHHHcCceEEEEcCC----CCCCCCCCCCCCChH
Q 020932 68 NKYGERLVGVLHDAE----SSEIVVLCHGFRSTKDDP--SMVNLAVALQNEGISAFRFDFA----GNGESEGSFQYGNYW 137 (319)
Q Consensus 68 ~~dg~~l~~~~~~~~----~~~~vv~~hG~~~~~~~~--~~~~~~~~l~~~G~~v~~~d~~----G~G~s~~~~~~~~~~ 137 (319)
+.|...|.++.-... +.|++|++||.+....+. ....-...++.+++-|+.+++| |+-.+...... .-.
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~-~gN 183 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAP-SGN 183 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSH-BST
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccC-chh
Confidence 456777775433221 359999999987544321 2233345566778999999998 33222211111 113
Q ss_pred HHHhHHHHHHHHHHhC------CCceEEEEEEehhHHHHHHHHhhcC--C-ccEEEEEeccc
Q 020932 138 READDLRAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKYN--D-IRTFVNVSGRY 190 (319)
Q Consensus 138 ~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~ 190 (319)
.=..|...+++|+++. ++++|.|+|+|.||..+...+.... . +.++|+.++..
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 3367899999999886 6779999999999998776665532 3 99999999843
No 179
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.27 E-value=3.2e-06 Score=70.62 Aligned_cols=100 Identities=20% Similarity=0.298 Sum_probs=69.9
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCce---EEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEE
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGIS---AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGA 159 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~ 159 (319)
.-+++++||++.+.. .+..+...+...|+. ++.+++++- ... . +.....+.+.+.++..... +.+++.
T Consensus 59 ~~pivlVhG~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~-~----~~~~~~~ql~~~V~~~l~~~ga~~v~ 130 (336)
T COG1075 59 KEPIVLVHGLGGGYG--NFLPLDYRLAILGWLTNGVYAFELSGG-DGT-Y----SLAVRGEQLFAYVDEVLAKTGAKKVN 130 (336)
T ss_pred CceEEEEccCcCCcc--hhhhhhhhhcchHHHhccccccccccc-CCC-c----cccccHHHHHHHHHHHHhhcCCCceE
Confidence 448999999977764 477777777777777 888888755 111 1 1112233344444333332 678899
Q ss_pred EEEEehhHHHHHHHHhhcC--C-ccEEEEEecccc
Q 020932 160 ILGHSKGGSVVLLYASKYN--D-IRTFVNVSGRYD 191 (319)
Q Consensus 160 l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~~ 191 (319)
++|||+||.....++...+ . |+.++.++++-.
T Consensus 131 LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 131 LIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred EEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 9999999999999999888 4 999999987644
No 180
>PLN02209 serine carboxypeptidase
Probab=98.26 E-value=0.00079 Score=58.26 Aligned_cols=128 Identities=10% Similarity=0.034 Sum_probs=79.8
Q ss_pred EEEEEeCCCCceEEEEEEeCC----CceEEEEEccCCCCCCChhHHHHHH-----------------------HHHHcCc
Q 020932 62 QELVIPNKYGERLVGVLHDAE----SSEIVVLCHGFRSTKDDPSMVNLAV-----------------------ALQNEGI 114 (319)
Q Consensus 62 ~~~~~~~~dg~~l~~~~~~~~----~~~~vv~~hG~~~~~~~~~~~~~~~-----------------------~l~~~G~ 114 (319)
-.+.+....+..+.+++++.. ..|.|+++.|..+++. .+..+.+ .+.+. .
T Consensus 42 Gy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS--~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-a 118 (437)
T PLN02209 42 GYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSC--LSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-A 118 (437)
T ss_pred EEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHH--hhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-C
Confidence 444555445677888887653 5789999999988773 2211110 12222 5
Q ss_pred eEEEEc-CCCCCCCCCCC--CCCChHHHHhHHHHHHHHHHhC----CCceEEEEEEehhHHHHHHHHhh----c-----C
Q 020932 115 SAFRFD-FAGNGESEGSF--QYGNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASK----Y-----N 178 (319)
Q Consensus 115 ~v~~~d-~~G~G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~----~-----p 178 (319)
+++.+| ..|.|.|-... ...+-+..++|+..+++..-+. ...+++|.|.|+||..+-.+|.. . +
T Consensus 119 nllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~ 198 (437)
T PLN02209 119 NIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNP 198 (437)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCC
Confidence 788899 45888885432 1222234567777777654443 23479999999999865555432 1 2
Q ss_pred C--ccEEEEEeccccc
Q 020932 179 D--IRTFVNVSGRYDL 192 (319)
Q Consensus 179 ~--v~~~v~~~~~~~~ 192 (319)
. ++++++.++..+.
T Consensus 199 ~inl~Gi~igng~td~ 214 (437)
T PLN02209 199 PINLQGYVLGNPITHI 214 (437)
T ss_pred ceeeeeEEecCcccCh
Confidence 2 7899988886543
No 181
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.24 E-value=3.7e-06 Score=57.12 Aligned_cols=59 Identities=24% Similarity=0.429 Sum_probs=53.4
Q ss_pred CCcEEEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCc-ccHHHHHHHHHHHHHh
Q 020932 250 ECSVLTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYT-NHQAELVSVVLDFVKA 308 (319)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~i~~fl~~ 308 (319)
..|+|++.++.|+++|.+.++++.+.+++++++++++.||..+ ....-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 5899999999999999999999999999999999999999976 4557778888899875
No 182
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.23 E-value=4.2e-05 Score=63.81 Aligned_cols=148 Identities=14% Similarity=0.168 Sum_probs=93.4
Q ss_pred CCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecc-cccccchhhhhchHHHHHhhhcc-ccc--cccC-CCcceeeee
Q 020932 154 NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGR-YDLKGGIEDRLGKDYMEKIMQDG-FID--VKNK-TGDVEYRVT 228 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~-~~~~~~~~~ 228 (319)
..+++++.|.|==|..++..|+..++|++++.+.-. ++....+... ...-+ ... +... .........
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~--------y~~yG~~ws~a~~dY~~~gi~~~l~ 241 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQ--------YRSYGGNWSFAFQDYYNEGITQQLD 241 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHH--------HHHhCCCCccchhhhhHhCchhhcC
Confidence 678999999999999999999977779888876542 2322222111 11111 000 0000 000011111
Q ss_pred hhhHHhhhc-cchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCCC-CeEEEecCCCccCcccHHHHHHHHHHHH
Q 020932 229 EESLMDRLN-TNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPN-HKLHVVEGANHGYTNHQAELVSVVLDFV 306 (319)
Q Consensus 229 ~~~~~~~~~-~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~i~~fl 306 (319)
...+..... -|..... .+++.|.++|.|..|+++.+....-+.+.+|+ ..+..+||++|.... .++.+.+..|+
T Consensus 242 tp~f~~L~~ivDP~~Y~--~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~ 317 (367)
T PF10142_consen 242 TPEFDKLMQIVDPYSYR--DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFY 317 (367)
T ss_pred CHHHHHHHHhcCHHHHH--HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHH
Confidence 122221111 1111111 14489999999999999999999999999985 568889999999765 77888899999
Q ss_pred HhhcCCC
Q 020932 307 KASLKQD 313 (319)
Q Consensus 307 ~~~~~~~ 313 (319)
.......
T Consensus 318 ~~~~~~~ 324 (367)
T PF10142_consen 318 NRIQNGR 324 (367)
T ss_pred HHHHcCC
Confidence 9866543
No 183
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.19 E-value=0.0014 Score=56.80 Aligned_cols=127 Identities=10% Similarity=0.030 Sum_probs=75.9
Q ss_pred EEEeCCCCceEEEEEEeCC----CceEEEEEccCCCCCCC-hhHHHHHH-------------H-------HHHcCceEEE
Q 020932 64 LVIPNKYGERLVGVLHDAE----SSEIVVLCHGFRSTKDD-PSMVNLAV-------------A-------LQNEGISAFR 118 (319)
Q Consensus 64 ~~~~~~dg~~l~~~~~~~~----~~~~vv~~hG~~~~~~~-~~~~~~~~-------------~-------l~~~G~~v~~ 118 (319)
+.+....+..+.+|+++.. ..|.|+.+.|..+++.. ..+..+.. . +.+. .+++.
T Consensus 42 ~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllf 120 (433)
T PLN03016 42 IGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANIIF 120 (433)
T ss_pred EEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEEE
Confidence 3443334677888887653 57899999999887731 01111111 1 1222 57889
Q ss_pred Ec-CCCCCCCCCCCCC--CChHHHHhHHHHHHHHHHhC----CCceEEEEEEehhHHHHHHHHhh----c-----CC--c
Q 020932 119 FD-FAGNGESEGSFQY--GNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASK----Y-----ND--I 180 (319)
Q Consensus 119 ~d-~~G~G~s~~~~~~--~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~----~-----p~--v 180 (319)
+| .-|.|.|...... .+-...++++..++...-+. ...+++|.|.|+||..+-.+|.. . +. +
T Consensus 121 iDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inL 200 (433)
T PLN03016 121 LDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINL 200 (433)
T ss_pred ecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccc
Confidence 99 5588988644321 11123345666666543332 34579999999999866555442 1 22 7
Q ss_pred cEEEEEecccc
Q 020932 181 RTFVNVSGRYD 191 (319)
Q Consensus 181 ~~~v~~~~~~~ 191 (319)
+++++-+|..+
T Consensus 201 kGi~iGNg~t~ 211 (433)
T PLN03016 201 QGYMLGNPVTY 211 (433)
T ss_pred eeeEecCCCcC
Confidence 89988887553
No 184
>COG0627 Predicted esterase [General function prediction only]
Probab=98.17 E-value=3.5e-05 Score=63.24 Aligned_cols=225 Identities=17% Similarity=0.131 Sum_probs=110.8
Q ss_pred CceEEEEEccCCCCCCChh-HHHHHHHHHHcCceEEEEcCC--------------CCCCCCC---CC-----CCCCh-HH
Q 020932 83 SSEIVVLCHGFRSTKDDPS-MVNLAVALQNEGISAFRFDFA--------------GNGESEG---SF-----QYGNY-WR 138 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~-~~~~~~~l~~~G~~v~~~d~~--------------G~G~s~~---~~-----~~~~~-~~ 138 (319)
+-|+++++||..++..+.+ ...+-......|+.++++|-. |-+.|-. .. ....+ ..
T Consensus 53 ~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tf 132 (316)
T COG0627 53 DIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETF 132 (316)
T ss_pred CCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHH
Confidence 4567888899888753322 234444445567878876432 2211110 00 00111 22
Q ss_pred HHhHHHHHHHHHHhCCC--ceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccccchhhhhchHHHHHhhhccccc
Q 020932 139 EADDLRAVVQYFCGANR--AVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLKGGIEDRLGKDYMEKIMQDGFID 215 (319)
Q Consensus 139 ~~~d~~~~i~~l~~~~~--~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (319)
..+++...++....... ++..++||||||.-|+.+|+++|+ ++.+..++|........... ..+...+.......
T Consensus 133 l~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~--~~~~~~~g~~~~~~ 210 (316)
T COG0627 133 LTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPT--LAMGDPWGGKAFNA 210 (316)
T ss_pred HHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccccccccc--ccccccccCccHHH
Confidence 23455544443222122 268999999999999999999988 99999999877765333222 00000000000000
Q ss_pred cccCCCc-ceeeeehhhHHhhhccc--hhhhhhhccCCCcEEEEecCCCCccC--cchHHHHHhhCC----CCeEEEecC
Q 020932 216 VKNKTGD-VEYRVTEESLMDRLNTN--MHDACLQIDMECSVLTIHGSSDKIIP--LQDAHEFDKIIP----NHKLHVVEG 286 (319)
Q Consensus 216 ~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~l~i~g~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~ 286 (319)
....... ...........+.+... ........ ...++++-+|..|.+.. ....+.+.+.+. +..+...++
T Consensus 211 ~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~-~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~ 289 (316)
T COG0627 211 MLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGG-SPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVRDQPG 289 (316)
T ss_pred hcCCCccccccccCchhHHHHhhhcccccceeccc-CCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceeeeCCC
Confidence 0000101 11111222222221100 00000000 24567778898888764 223455555443 456666678
Q ss_pred CCccCcccHHHHHHHHHHHHHhhcC
Q 020932 287 ANHGYTNHQAELVSVVLDFVKASLK 311 (319)
Q Consensus 287 ~gH~~~~~~~~~~~~i~~fl~~~~~ 311 (319)
++|.... =....+....|+...+.
T Consensus 290 G~Hsw~~-w~~~l~~~~~~~a~~l~ 313 (316)
T COG0627 290 GDHSWYF-WASQLADHLPWLAGALG 313 (316)
T ss_pred CCcCHHH-HHHHHHHHHHHHHHHhc
Confidence 8998532 13445555666666554
No 185
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.17 E-value=1.1e-05 Score=68.88 Aligned_cols=83 Identities=16% Similarity=0.234 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHcCceE-----EE-EcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHH
Q 020932 101 SMVNLAVALQNEGISA-----FR-FDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYA 174 (319)
Q Consensus 101 ~~~~~~~~l~~~G~~v-----~~-~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a 174 (319)
.|..+++.|.+.||.. .+ +|+|-- ....+.....+...|+.+.....++|+|+||||||.++..++
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~--------~~~~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS--------PAERDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc--------hhhHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHH
Confidence 6899999999988752 22 687721 112346678888888888776677999999999999999988
Q ss_pred hhcC------C-ccEEEEEecccc
Q 020932 175 SKYN------D-IRTFVNVSGRYD 191 (319)
Q Consensus 175 ~~~p------~-v~~~v~~~~~~~ 191 (319)
...+ + |+++|.++++..
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCC
Confidence 7763 2 999999998764
No 186
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.06 E-value=8e-06 Score=64.90 Aligned_cols=107 Identities=20% Similarity=0.287 Sum_probs=54.2
Q ss_pred CCceEEEEEccCCCCCCC-hhHHHHHHHHHHc--CceEEEEcCCCCCCCC-CCCC-CCChHHHHhHHHHHHHHHHhCCCc
Q 020932 82 ESSEIVVLCHGFRSTKDD-PSMVNLAVALQNE--GISAFRFDFAGNGESE-GSFQ-YGNYWREADDLRAVVQYFCGANRA 156 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~-~~~~-~~~~~~~~~d~~~~i~~l~~~~~~ 156 (319)
.+..|||+.||+|.+..+ ..+..+.+.+.+. |.-|.+++.- .+.++ .... ......+++.+.+.+....+.. +
T Consensus 3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~-~ 80 (279)
T PF02089_consen 3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELA-N 80 (279)
T ss_dssp TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGT-T
T ss_pred CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhh-c
Confidence 345579999999986522 2345555444433 6778888762 21110 0000 1122334444444444432222 3
Q ss_pred eEEEEEEehhHHHHHHHHhhcCC--ccEEEEEeccc
Q 020932 157 VGAILGHSKGGSVVLLYASKYND--IRTFVNVSGRY 190 (319)
Q Consensus 157 ~i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~ 190 (319)
-+.++|+|.||.++-.++.+.++ |+.+|.++++-
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 49999999999999999999876 99999998754
No 187
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.01 E-value=6e-05 Score=67.20 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=63.6
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHH----------------cCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQN----------------EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAV 146 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~----------------~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~ 146 (319)
++-+|+|++|..|+. ...+.++....+ ..++.++.|+-+- - .........++++-+.++
T Consensus 88 sGIPVLFIPGNAGSy--KQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe--~-tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSY--KQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE--F-TAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCceEEEecCCCCch--HHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch--h-hhhccHhHHHHHHHHHHH
Confidence 456899999999987 345555554432 1255666665320 0 001122345556666666
Q ss_pred HHHHHhC----------CCceEEEEEEehhHHHHHHHHhhc---CC-ccEEEEEecccccc
Q 020932 147 VQYFCGA----------NRAVGAILGHSKGGSVVLLYASKY---ND-IRTFVNVSGRYDLK 193 (319)
Q Consensus 147 i~~l~~~----------~~~~i~l~G~S~Gg~~a~~~a~~~---p~-v~~~v~~~~~~~~~ 193 (319)
|+++.+. .+..|+++||||||.+|...+..- ++ |.-++..+++....
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~ 223 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAP 223 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCC
Confidence 6655443 145699999999999998766542 22 66666666654433
No 188
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.87 E-value=0.00046 Score=57.50 Aligned_cols=105 Identities=20% Similarity=0.216 Sum_probs=82.3
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC---CCCChHHHHhHHHHHHHHHHhCCCceE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF---QYGNYWREADDLRAVVQYFCGANRAVG 158 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~---~~~~~~~~~~d~~~~i~~l~~~~~~~i 158 (319)
-.+|+|+..-|++....- ........|. -+-+.+++|-+|.|.+.+ ...++++.+.|..++++.++..-.++.
T Consensus 61 ~drPtV~~T~GY~~~~~p-~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kW 136 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSP-RRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKW 136 (448)
T ss_pred CCCCeEEEecCcccccCc-cccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCc
Confidence 378999999999886532 2334444442 367899999999998765 345678889999999999988777789
Q ss_pred EEEEEehhHHHHHHHHhhcCC-ccEEEEEeccc
Q 020932 159 AILGHSKGGSVVLLYASKYND-IRTFVNVSGRY 190 (319)
Q Consensus 159 ~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~ 190 (319)
+--|-|=||+.++.+=.-+|+ |++.|.-.++.
T Consensus 137 ISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 137 ISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred eecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 999999999999988777898 99988765544
No 189
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.86 E-value=0.00059 Score=54.57 Aligned_cols=107 Identities=14% Similarity=0.098 Sum_probs=62.1
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcC----ceEEEEcCCCCCCCCCCCCCCChHHHHhHH-HHHHHHHHhC----
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEG----ISAFRFDFAGNGESEGSFQYGNYWREADDL-RAVVQYFCGA---- 153 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~-~~~i~~l~~~---- 153 (319)
+.|.+++.||-........+ ...+.|...| -.++.+|.--.-. ............+.+ .+++=++.+.
T Consensus 97 k~pvl~~~DG~~~~~~g~i~-~~~dsli~~g~i~pai~vgid~~d~~~--R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIP-RILDSLIAAGEIPPAILVGIDYIDVKK--RREELHCNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred cccEEEEeccHHHHhcCChH-HHHHHHHHcCCCCCceEEecCCCCHHH--HHHHhcccHHHHHHHHHHhhhhhhccCccc
Confidence 56889999985433221233 3444444443 3455666531000 000111223333333 3344445443
Q ss_pred -CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccccc
Q 020932 154 -NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDL 192 (319)
Q Consensus 154 -~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~ 192 (319)
..+.-+|.|.|+||.+++..+.++|+ +..++..+|.+..
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 34457899999999999999999999 8888888886654
No 190
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.79 E-value=8.3e-05 Score=61.50 Aligned_cols=101 Identities=17% Similarity=0.110 Sum_probs=72.5
Q ss_pred eEEEEEccCCCCCCC-----hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC----------CCCChHHHHhHHHHHHHH
Q 020932 85 EIVVLCHGFRSTKDD-----PSMVNLAVALQNEGISAFRFDFAGNGESEGSF----------QYGNYWREADDLRAVVQY 149 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~-----~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~----------~~~~~~~~~~d~~~~i~~ 149 (319)
.+|++.-|.-++.+. .+.-.+++.| +--++..++|.+|+|.+-- .+.+.++..+|...+|..
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~---~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~ 157 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPEL---KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTF 157 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhh---CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHH
Confidence 568888887665531 1122334333 4568899999999987421 123446667999999999
Q ss_pred HHhC---CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEec
Q 020932 150 FCGA---NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSG 188 (319)
Q Consensus 150 l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 188 (319)
++.. ...+|+++|-|+||++|..+=.++|. +.+.+..++
T Consensus 158 lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 158 LKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASA 200 (492)
T ss_pred HhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccC
Confidence 9876 45689999999999999999999999 555555444
No 191
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.78 E-value=0.0019 Score=51.22 Aligned_cols=105 Identities=8% Similarity=0.037 Sum_probs=73.0
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILG 162 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G 162 (319)
+.|.|+++-...++.. ...+.-.+.|... ..|+.-|+-..-..+-.....+++++++-+.+.+..+ +.+ +++++
T Consensus 102 pdPkvLivapmsGH~a-TLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~---Gp~-~hv~a 175 (415)
T COG4553 102 PDPKVLIVAPMSGHYA-TLLRGTVEALLPY-HDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFL---GPD-AHVMA 175 (415)
T ss_pred CCCeEEEEecccccHH-HHHHHHHHHhccc-cceeEeeccccceeecccCCccHHHHHHHHHHHHHHh---CCC-CcEEE
Confidence 4568888888777765 3567777777765 6899999875544444445567788888888888888 554 78888
Q ss_pred EehhHH-----HHHHHHhhcCC-ccEEEEEecccccc
Q 020932 163 HSKGGS-----VVLLYASKYND-IRTFVNVSGRYDLK 193 (319)
Q Consensus 163 ~S~Gg~-----~a~~~a~~~p~-v~~~v~~~~~~~~~ 193 (319)
.|.-+. +++..+...|. -..+++++++.+..
T Consensus 176 VCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 176 VCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred EecCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 887654 33333334465 78899999887653
No 192
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.76 E-value=0.00082 Score=50.58 Aligned_cols=105 Identities=16% Similarity=0.167 Sum_probs=63.2
Q ss_pred CceEEEEEccCCCCCCChhH---------------HHHHHHHHHcCceEEEEcCCC---CCCCCCCCCCCChHHHHhHHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSM---------------VNLAVALQNEGISAFRFDFAG---NGESEGSFQYGNYWREADDLR 144 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~---------------~~~~~~l~~~G~~v~~~d~~G---~G~s~~~~~~~~~~~~~~d~~ 144 (319)
++..+|++||.|..... .| .++++.-...||.|++.+.-- +-++...+.. ....-++.+.
T Consensus 100 ~~kLlVLIHGSGvVrAG-QWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~k-yirt~veh~~ 177 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAG-QWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQK-YIRTPVEHAK 177 (297)
T ss_pred ccceEEEEecCceEecc-hHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcch-hccchHHHHH
Confidence 56689999999865542 23 334556667799999987531 1111111111 1111223333
Q ss_pred HHHHHHHh-CCCceEEEEEEehhHHHHHHHHhhcCC---ccEEEEEecc
Q 020932 145 AVVQYFCG-ANRAVGAILGHSKGGSVVLLYASKYND---IRTFVNVSGR 189 (319)
Q Consensus 145 ~~i~~l~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~ 189 (319)
-+-..+.. .....+.++.||+||...+.+..++|+ |.++.+..+.
T Consensus 178 yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 178 YVWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HHHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 22222222 266789999999999999999999987 5555555554
No 193
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.68 E-value=9.4e-05 Score=44.74 Aligned_cols=43 Identities=21% Similarity=0.150 Sum_probs=26.9
Q ss_pred cccceEEEEEeCCCCceEEEEEEeCC--------CceEEEEEccCCCCCCC
Q 020932 57 LAVKQQELVIPNKYGERLVGVLHDAE--------SSEIVVLCHGFRSTKDD 99 (319)
Q Consensus 57 ~~~~~~~~~~~~~dg~~l~~~~~~~~--------~~~~vv~~hG~~~~~~~ 99 (319)
.+++.|+..+.+.||..|..+..+.+ ++|+|++.||+.++++.
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 57789999999999999998777654 47899999999999854
No 194
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.59 E-value=0.00017 Score=62.98 Aligned_cols=90 Identities=12% Similarity=0.074 Sum_probs=61.1
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCCCCC--CCCCCCCChHHHHhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhh
Q 020932 100 PSMVNLAVALQNEGISAFRFDFAGNGES--EGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 100 ~~~~~~~~~l~~~G~~v~~~d~~G~G~s--~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
+.|..+++.|++.||. --|+.|..-- .........+.+...+...|+.+... +.++|+|+||||||.+++.++..
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 4679999999999996 3333332110 00111112255567788888887665 46799999999999999987763
Q ss_pred c-----------C----C-ccEEEEEecccc
Q 020932 177 Y-----------N----D-IRTFVNVSGRYD 191 (319)
Q Consensus 177 ~-----------p----~-v~~~v~~~~~~~ 191 (319)
. + + |++.|.+++++.
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccC
Confidence 2 1 1 899999988653
No 195
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.54 E-value=0.0038 Score=49.34 Aligned_cols=40 Identities=33% Similarity=0.385 Sum_probs=35.1
Q ss_pred CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccc
Q 020932 154 NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK 193 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 193 (319)
+.++..++|||+||.+++.....+|+ +...++++|.+-+.
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~ 175 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWH 175 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhC
Confidence 56678999999999999999999999 99999999966543
No 196
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.52 E-value=0.0015 Score=55.66 Aligned_cols=108 Identities=18% Similarity=0.195 Sum_probs=80.0
Q ss_pred CCceEEEEEccCCCCCCC------hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC-------CCChHHHHhHHHHHHH
Q 020932 82 ESSEIVVLCHGFRSTKDD------PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-------YGNYWREADDLRAVVQ 148 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~------~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-------~~~~~~~~~d~~~~i~ 148 (319)
..+|..|+|-|=|...+. ..|..++ .+.|-.|+.+++|-+|.|.+... ..+..+..+|+.++|+
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~A---kkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~ 160 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWA---KKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIK 160 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHH---HHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHH
Confidence 367888888886654422 2333333 34478899999999998865432 2244667899999999
Q ss_pred HHHhC----CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEeccccc
Q 020932 149 YFCGA----NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDL 192 (319)
Q Consensus 149 ~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~ 192 (319)
.+..+ +..+.+.+|-|+-|.++..+=..+|+ +.+.|..+++...
T Consensus 161 ~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 161 AMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred HHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 98776 23489999999999999999999999 8888877776543
No 197
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.51 E-value=0.0022 Score=50.03 Aligned_cols=103 Identities=13% Similarity=0.074 Sum_probs=64.1
Q ss_pred eCCCceEEEEEccCCCCC-CChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCCh-HHHHhHHHHHHHHHHhCC---
Q 020932 80 DAESSEIVVLCHGFRSTK-DDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNY-WREADDLRAVVQYFCGAN--- 154 (319)
Q Consensus 80 ~~~~~~~vv~~hG~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~-~~~~~d~~~~i~~l~~~~--- 154 (319)
++.++.+|=|+-|..-.. -...|+.+.+.|+++||.|++.-+.- ..+.... .........+++.+....
T Consensus 13 P~~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 13 PPRPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV------TFDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCCCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC------CCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 444555666777754322 22568999999999999999987741 1111111 111233444555555431
Q ss_pred --CceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEec
Q 020932 155 --RAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSG 188 (319)
Q Consensus 155 --~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 188 (319)
.-+++-+|||+|+-+-+.+...++. -++-|+++-
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 1367889999999998887776654 666676654
No 198
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.49 E-value=0.0011 Score=59.83 Aligned_cols=121 Identities=17% Similarity=0.135 Sum_probs=70.9
Q ss_pred CCCCceEEEEEEeCC-C--ceEEEEEccCCCCCCC-hh--HHHHHHHHHHcCceEEEEcCC----CCCCCCCCCCCCChH
Q 020932 68 NKYGERLVGVLHDAE-S--SEIVVLCHGFRSTKDD-PS--MVNLAVALQNEGISAFRFDFA----GNGESEGSFQYGNYW 137 (319)
Q Consensus 68 ~~dg~~l~~~~~~~~-~--~~~vv~~hG~~~~~~~-~~--~~~~~~~l~~~G~~v~~~d~~----G~G~s~~~~~~~~~~ 137 (319)
+.|...+.++.-... . .|++|++||.+-...+ .. .......+..+..-|+.+.+| |+..........++.
T Consensus 93 sEDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~g 172 (545)
T KOG1516|consen 93 SEDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLG 172 (545)
T ss_pred cCCCceEEEeccCCCccCCCCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCccc
Confidence 456666664322111 2 6899999998754432 11 122223334445678888887 322222111112221
Q ss_pred HHHhHHHHHHHHHHhC------CCceEEEEEEehhHHHHHHHHhhcC--C-ccEEEEEeccc
Q 020932 138 READDLRAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKYN--D-IRTFVNVSGRY 190 (319)
Q Consensus 138 ~~~~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~p--~-v~~~v~~~~~~ 190 (319)
..|...+++|+++. ++++|.++|||.||..+..+..... . +..+|..++..
T Consensus 173 --l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 173 --LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred --HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 34788888888776 6789999999999999877665421 2 66667666643
No 199
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.31 E-value=0.065 Score=44.77 Aligned_cols=59 Identities=12% Similarity=0.241 Sum_probs=46.7
Q ss_pred CCcEEEEecCCCCccCcchHHHHHhhCC------------------------C-CeEEEecCCCccCcccHHHHHHHHHH
Q 020932 250 ECSVLTIHGSSDKIIPLQDAHEFDKIIP------------------------N-HKLHVVEGANHGYTNHQAELVSVVLD 304 (319)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~~~~~~~~~i~~ 304 (319)
..++|+..|+.|.+|+.-..+.+.+.+. + .++..+-++||....+|....+.+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~ 312 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 312 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHH
Confidence 5899999999999999877777665542 1 45666778999976678888999999
Q ss_pred HHHh
Q 020932 305 FVKA 308 (319)
Q Consensus 305 fl~~ 308 (319)
|+..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 9864
No 200
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.22 E-value=0.018 Score=43.13 Aligned_cols=107 Identities=23% Similarity=0.168 Sum_probs=62.8
Q ss_pred CceEEEEEccCCCCCCChhH------HHHHHHHH------HcCceEEEEcCCCCCCCC-CCC---CCCChHHHHhHHHHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSM------VNLAVALQ------NEGISAFRFDFAGNGESE-GSF---QYGNYWREADDLRAV 146 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~------~~~~~~l~------~~G~~v~~~d~~G~G~s~-~~~---~~~~~~~~~~d~~~~ 146 (319)
...+.++++|.+.+...... ..+.+.+. ..+=.+-++-+.|+-.-. ... ....-..-+.++..+
T Consensus 18 A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f 97 (177)
T PF06259_consen 18 ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARF 97 (177)
T ss_pred cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHH
Confidence 45688899999887753111 11222111 112244444444443221 111 111113335678888
Q ss_pred HHHHHhC--CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecc
Q 020932 147 VQYFCGA--NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGR 189 (319)
Q Consensus 147 i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~ 189 (319)
++-|+.. +..++.++|||+|+.++-.++...+. ++.+|+++++
T Consensus 98 ~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 98 LDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 8877665 34579999999999999987777344 9999988764
No 201
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.19 E-value=0.0012 Score=48.67 Aligned_cols=53 Identities=13% Similarity=0.051 Sum_probs=36.5
Q ss_pred HHhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC-----ccEEEEEecccc
Q 020932 139 EADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-----IRTFVNVSGRYD 191 (319)
Q Consensus 139 ~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-----v~~~v~~~~~~~ 191 (319)
....+...++....+ +..++.++|||+||.+|..++..... +..++.++++..
T Consensus 10 ~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 10 LANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 345555555554432 56689999999999999998877632 566777776543
No 202
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.02 E-value=0.0019 Score=54.80 Aligned_cols=85 Identities=19% Similarity=0.198 Sum_probs=60.9
Q ss_pred hhHHHHHHHHHHcCce------EEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHH
Q 020932 100 PSMVNLAVALQNEGIS------AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLL 172 (319)
Q Consensus 100 ~~~~~~~~~l~~~G~~------v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~ 172 (319)
++|..+++.|..-||. -..+|+|= |- ......+++...+...|+...+. +.++|+|++|||||.+.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~--~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ly 198 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SY--HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLY 198 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---cc--CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHH
Confidence 5789999999999987 33467762 11 11122355667788888877666 4589999999999999999
Q ss_pred HHhhcCC---------ccEEEEEecc
Q 020932 173 YASKYND---------IRTFVNVSGR 189 (319)
Q Consensus 173 ~a~~~p~---------v~~~v~~~~~ 189 (319)
+....+. |++.+.++++
T Consensus 199 Fl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 199 FLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHhcccccchhHHHHHHHHHHccCch
Confidence 9887754 5666666653
No 203
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.89 E-value=0.0027 Score=49.68 Aligned_cols=49 Identities=20% Similarity=0.228 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcC-----CccEEEEEeccc
Q 020932 142 DLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN-----DIRTFVNVSGRY 190 (319)
Q Consensus 142 d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p-----~v~~~v~~~~~~ 190 (319)
...+.++.+.+...+++.+.|||.||.+|..++...+ .|..+...+++.
T Consensus 70 ~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 70 SALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3444555554444456999999999999999888743 278888777754
No 204
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.87 E-value=0.0025 Score=46.08 Aligned_cols=36 Identities=22% Similarity=0.272 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhc
Q 020932 142 DLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 142 d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
.+.+.++.+.++ +..++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 444444444333 446899999999999999888764
No 205
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.70 E-value=0.013 Score=42.71 Aligned_cols=54 Identities=20% Similarity=0.268 Sum_probs=39.9
Q ss_pred HhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEecccccc
Q 020932 140 ADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSGRYDLK 193 (319)
Q Consensus 140 ~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~ 193 (319)
++--.+.-+++.++ -+....+-|-||||+.|..+.-++|+ +.++|.+++.++..
T Consensus 84 ~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdar 139 (227)
T COG4947 84 AERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDAR 139 (227)
T ss_pred HHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHH
Confidence 33334444444444 23457788999999999999999999 89999999977643
No 206
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.65 E-value=0.022 Score=49.30 Aligned_cols=125 Identities=18% Similarity=0.154 Sum_probs=78.5
Q ss_pred EEEEeCCCCceEEEEEEeC----CCceEEEEEccCCCCCCChhHHHHHHHH-------------------HHcCceEEEE
Q 020932 63 ELVIPNKYGERLVGVLHDA----ESSEIVVLCHGFRSTKDDPSMVNLAVAL-------------------QNEGISAFRF 119 (319)
Q Consensus 63 ~~~~~~~dg~~l~~~~~~~----~~~~~vv~~hG~~~~~~~~~~~~~~~~l-------------------~~~G~~v~~~ 119 (319)
.+.+....+..+.+|+.+. ..+|.||.+.|..+++. .. .+...+ .+. -+++-+
T Consensus 48 Yv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSS--l~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~-aNiLfL 123 (454)
T KOG1282|consen 48 YVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSS--LG-GLFEENGPFRVKYNGKTLYLNPYSWNKE-ANILFL 123 (454)
T ss_pred eEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccc--hh-hhhhhcCCeEEcCCCCcceeCCcccccc-ccEEEE
Confidence 3445545789999999875 35789999999998883 22 222221 111 357788
Q ss_pred cCC-CCCCCCCCCC--C-CChHHHHhHHHHHH-HHHHhC---CCceEEEEEEehhHHHHHHHHh----hc-----CC--c
Q 020932 120 DFA-GNGESEGSFQ--Y-GNYWREADDLRAVV-QYFCGA---NRAVGAILGHSKGGSVVLLYAS----KY-----ND--I 180 (319)
Q Consensus 120 d~~-G~G~s~~~~~--~-~~~~~~~~d~~~~i-~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~----~~-----p~--v 180 (319)
|.| |.|.|-.... . .+-+..++|...++ +|+.+. ..+++.|.|-|++|...-.+|. .. |. +
T Consensus 124 d~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNL 203 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINL 203 (454)
T ss_pred ecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccc
Confidence 877 7777653332 1 22244566766655 555543 4557999999999966544443 22 22 7
Q ss_pred cEEEEEecccc
Q 020932 181 RTFVNVSGRYD 191 (319)
Q Consensus 181 ~~~v~~~~~~~ 191 (319)
+|+++-+|..+
T Consensus 204 kG~~IGNg~td 214 (454)
T KOG1282|consen 204 KGYAIGNGLTD 214 (454)
T ss_pred eEEEecCcccC
Confidence 88888777554
No 207
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.58 E-value=0.0059 Score=50.12 Aligned_cols=140 Identities=16% Similarity=0.144 Sum_probs=82.0
Q ss_pred CCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecc-cccccchhhhhchHHHHHhhhccccccccCCCcceeeeehhhH
Q 020932 154 NRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGR-YDLKGGIEDRLGKDYMEKIMQDGFIDVKNKTGDVEYRVTEESL 232 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (319)
.++.+.+-|-|--|..++..|...|++.++|.+..- ++....+.. +.+. ..............+.+
T Consensus 232 ~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~h---------iyrs----YGgnwpi~l~pyyaegi 298 (507)
T COG4287 232 EIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLH---------IYRS----YGGNWPIKLAPYYAEGI 298 (507)
T ss_pred eeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHH---------HHHh----hCCCCCcccchhHhhhH
Confidence 677899999999999999999999988887765431 111111110 0000 00000011111112222
Q ss_pred Hhhhccchhhhh-------------hhccCCCcEEEEecCCCCccCcchHHHHHhhCCCC-eEEEecCCCccCcccHHHH
Q 020932 233 MDRLNTNMHDAC-------------LQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIPNH-KLHVVEGANHGYTNHQAEL 298 (319)
Q Consensus 233 ~~~~~~~~~~~~-------------~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~~~~~~ 298 (319)
.+++..+..... ....+..|-.++.+..|.+++++.+.-.++.+|+. .+.++|+..|.... ..+
T Consensus 299 ~erl~tp~fkqL~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n--~~i 376 (507)
T COG4287 299 DERLETPLFKQLLEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN--QFI 376 (507)
T ss_pred HHhhcCHHHHHHHHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH--HHH
Confidence 222222111111 11245889999999999999999999999999975 57888999999642 223
Q ss_pred HHHHHHHHHh
Q 020932 299 VSVVLDFVKA 308 (319)
Q Consensus 299 ~~~i~~fl~~ 308 (319)
.+.+..|+++
T Consensus 377 ~esl~~flnr 386 (507)
T COG4287 377 KESLEPFLNR 386 (507)
T ss_pred HHHHHHHHHH
Confidence 3344444444
No 208
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.56 E-value=0.0062 Score=48.23 Aligned_cols=38 Identities=18% Similarity=0.162 Sum_probs=26.8
Q ss_pred HhHHHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhc
Q 020932 140 ADDLRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 140 ~~d~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
..++...+..+.++ +..++.+.|||+||.+|..++...
T Consensus 111 ~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 111 YNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHH
Confidence 34455555444443 456899999999999999887753
No 209
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.53 E-value=0.018 Score=49.71 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=67.4
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHH-------------------HHHcCceEEEEc-CCCCCCCCC--CCCCCChHHHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVA-------------------LQNEGISAFRFD-FAGNGESEG--SFQYGNYWREA 140 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~-------------------l~~~G~~v~~~d-~~G~G~s~~--~~~~~~~~~~~ 140 (319)
++|.|+.+.|..+++ ..+..+.+. +.+. -+++-+| .-|.|.|.. .....++....
T Consensus 100 ~rPvi~wlNGGPGcS--S~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~ 176 (498)
T COG2939 100 NRPVIFWLNGGPGCS--SVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAG 176 (498)
T ss_pred CCceEEEecCCCChH--hhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccc
Confidence 589999999999888 344333211 2222 3688899 558888874 33344556666
Q ss_pred hHHHHHHHHHHhC------CCceEEEEEEehhHHHHHHHHhhcCC----ccEEEEEecc
Q 020932 141 DDLRAVVQYFCGA------NRAVGAILGHSKGGSVVLLYASKYND----IRTFVNVSGR 189 (319)
Q Consensus 141 ~d~~~~i~~l~~~------~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~ 189 (319)
+|+..+.+.+.+. ...+.+|+|-|+||.-+-.+|....+ .++++.+.+.
T Consensus 177 ~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 7777666655443 23478999999999987777654321 5566665553
No 210
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.29 E-value=0.029 Score=40.43 Aligned_cols=79 Identities=10% Similarity=0.157 Sum_probs=48.6
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCce-EEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGIS-AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAI 160 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l 160 (319)
.+...||++-|+|..++ .... .....++. ++++|+..... ..++ . ..+.+-+
T Consensus 9 qgd~LIvyFaGwgtpps--~v~H---LilpeN~dl~lcYDY~dl~l------dfDf-------s---------Ay~hirl 61 (214)
T COG2830 9 QGDHLIVYFAGWGTPPS--AVNH---LILPENHDLLLCYDYQDLNL------DFDF-------S---------AYRHIRL 61 (214)
T ss_pred CCCEEEEEEecCCCCHH--HHhh---ccCCCCCcEEEEeehhhcCc------ccch-------h---------hhhhhhh
Confidence 34458888999988773 2322 22333455 67889863211 0111 1 2334789
Q ss_pred EEEehhHHHHHHHHhhcCCccEEEEEec
Q 020932 161 LGHSKGGSVVLLYASKYNDIRTFVNVSG 188 (319)
Q Consensus 161 ~G~S~Gg~~a~~~a~~~p~v~~~v~~~~ 188 (319)
+++|||-.+|-+++...+ ++..+.+++
T Consensus 62 vAwSMGVwvAeR~lqg~~-lksatAiNG 88 (214)
T COG2830 62 VAWSMGVWVAERVLQGIR-LKSATAING 88 (214)
T ss_pred hhhhHHHHHHHHHHhhcc-ccceeeecC
Confidence 999999999998766543 666666665
No 211
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.23 E-value=0.027 Score=42.55 Aligned_cols=104 Identities=16% Similarity=0.115 Sum_probs=53.5
Q ss_pred EEEEEccCCCCCCC-hhHHHHHHHHHHc-C---ceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEE
Q 020932 86 IVVLCHGFRSTKDD-PSMVNLAVALQNE-G---ISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGA 159 (319)
Q Consensus 86 ~vv~~hG~~~~~~~-~~~~~~~~~l~~~-G---~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~ 159 (319)
-||+..|.+..... ..-..+.+.+... | ..+..+++|-..... .-..+...=+.++...|+....+ ...+++
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~--~y~~S~~~G~~~~~~~i~~~~~~CP~~kiv 84 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN--SYGDSVAAGVANLVRLIEEYAARCPNTKIV 84 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG--SCHHHHHHHHHHHHHHHHHHHHHSTTSEEE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc--cccccHHHHHHHHHHHHHHHHHhCCCCCEE
Confidence 35555665543311 1223344444433 3 445556676322111 00011222345666666655555 556899
Q ss_pred EEEEehhHHHHHHHHhh--cC----C-ccEEEEEecccc
Q 020932 160 ILGHSKGGSVVLLYASK--YN----D-IRTFVNVSGRYD 191 (319)
Q Consensus 160 l~G~S~Gg~~a~~~a~~--~p----~-v~~~v~~~~~~~ 191 (319)
|+|+|.|+.++..++.. .+ + |.++++++-+..
T Consensus 85 l~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 85 LAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp EEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred EEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 99999999999998877 22 2 888888876543
No 212
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.18 E-value=0.2 Score=41.85 Aligned_cols=225 Identities=11% Similarity=0.107 Sum_probs=115.6
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC-CCChHHHHhHHHHHHHHHHhCCCceEEE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ-YGNYWREADDLRAVVQYFCGANRAVGAI 160 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~d~~~~i~~l~~~~~~~i~l 160 (319)
+...+||++=||.+..+. ..........+.|+.++.+-.|-+-....... ..+......-+.+++.... -+..++++
T Consensus 36 ~s~k~Iv~~~gWag~~~r-~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~-~~~~pi~f 113 (350)
T KOG2521|consen 36 ESEKPIVVLLGWAGAIDR-NLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYN-SDPCPIIF 113 (350)
T ss_pred CccccEEEEeeeccccch-hHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhcc-CCcCceEE
Confidence 344356666666666653 56677788888899999888775433222211 1122222234444444332 24567888
Q ss_pred EEEehhHHHHHHHH---hh-c-CC----ccEEEEEecccccccch------hhhhchHHHHHhhhccccccccCCCcc--
Q 020932 161 LGHSKGGSVVLLYA---SK-Y-ND----IRTFVNVSGRYDLKGGI------EDRLGKDYMEKIMQDGFIDVKNKTGDV-- 223 (319)
Q Consensus 161 ~G~S~Gg~~a~~~a---~~-~-p~----v~~~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 223 (319)
--+|+||...+... .. . |. ..+++..+.+....... ...........+....+..........
T Consensus 114 h~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 193 (350)
T KOG2521|consen 114 HVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEG 193 (350)
T ss_pred EEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeeccc
Confidence 89999997654322 22 2 32 45566655433211100 000011111111111111000000000
Q ss_pred -eeee----------ehhhHHhhhccchhhhhhhccCCCcEEEEecCCCCccCcchHHHHHhhCC----CCeEEEecCCC
Q 020932 224 -EYRV----------TEESLMDRLNTNMHDACLQIDMECSVLTIHGSSDKIIPLQDAHEFDKIIP----NHKLHVVEGAN 288 (319)
Q Consensus 224 -~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~g 288 (319)
.+.. ....+.+++.. .......+.+.+.+..|.++|.+..+++.+... +++-.-+.++-
T Consensus 194 ~~~~~~~~~~~~~~~r~~~~~~r~~~------~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~ 267 (350)
T KOG2521|consen 194 GAYLLGPLAEKISMSRKYHFLDRYEE------QRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSE 267 (350)
T ss_pred chhhhhhhhhccccccchHHHHHHHh------hhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCcc
Confidence 0000 00001111111 111225788999999999999988888754432 34555666788
Q ss_pred ccC--cccHHHHHHHHHHHHHhhcCCCC
Q 020932 289 HGY--TNHQAELVSVVLDFVKASLKQDH 314 (319)
Q Consensus 289 H~~--~~~~~~~~~~i~~fl~~~~~~~~ 314 (319)
|.- ...+..+.+...+|+++......
T Consensus 268 H~~h~r~~p~~y~~~~~~Fl~~~~~~~~ 295 (350)
T KOG2521|consen 268 HVAHFRSFPKTYLKKCSEFLRSVISSYN 295 (350)
T ss_pred ceeeeccCcHHHHHHHHHHHHhcccccC
Confidence 884 35678999999999998776543
No 213
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.15 E-value=0.01 Score=45.40 Aligned_cols=72 Identities=18% Similarity=0.153 Sum_probs=45.5
Q ss_pred HHHHHHHcCceEEEEcCCCCCCCC-----CCCCCCChHHHHhHHHHHHHHHHhC--CCceEEEEEEehhHHHHHHHHhhc
Q 020932 105 LAVALQNEGISAFRFDFAGNGESE-----GSFQYGNYWREADDLRAVVQYFCGA--NRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 105 ~~~~l~~~G~~v~~~d~~G~G~s~-----~~~~~~~~~~~~~d~~~~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
.+..|... .+|+++=+|=..... .......++.-..|+.++.++..++ +.++++|+|||.|+.+..+++.+.
T Consensus 38 qas~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 38 QASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HhhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 34445555 578888777432111 1111112233357888887765554 456899999999999999998875
No 214
>PLN02454 triacylglycerol lipase
Probab=96.01 E-value=0.017 Score=49.09 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=27.1
Q ss_pred HHhHHHHHHHHHHhC-CCc--eEEEEEEehhHHHHHHHHhh
Q 020932 139 EADDLRAVVQYFCGA-NRA--VGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 139 ~~~d~~~~i~~l~~~-~~~--~i~l~G~S~Gg~~a~~~a~~ 176 (319)
..+++...|+.+.++ ... +|++.|||+||.+|+.+|..
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 345566666666554 222 49999999999999998854
No 215
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.71 E-value=0.019 Score=48.12 Aligned_cols=87 Identities=17% Similarity=0.145 Sum_probs=46.0
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCCCCCCCC-CCCCCCChHHHHhHHHHHHHHHHhCCCceEE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFAGNGESE-GSFQYGNYWREADDLRAVVQYFCGANRAVGA 159 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~G~s~-~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~ 159 (319)
++-.||+.||+.+ .+...|...+...... +..++.....+.-... ......+ ...++++.+.+.+. ..++|.
T Consensus 79 ~~HLvVlthGi~~-~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG-~Rla~~~~e~~~~~---si~kIS 153 (405)
T KOG4372|consen 79 PKHLVVLTHGLHG-ADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLG-ERLAEEVKETLYDY---SIEKIS 153 (405)
T ss_pred CceEEEecccccc-ccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeee-cccHHHHhhhhhcc---ccceee
Confidence 4558999999988 2213466556665554 3323333333211111 0001111 22234444443333 578999
Q ss_pred EEEEehhHHHHHHHH
Q 020932 160 ILGHSKGGSVVLLYA 174 (319)
Q Consensus 160 l~G~S~Gg~~a~~~a 174 (319)
.+|||+||.++..+.
T Consensus 154 fvghSLGGLvar~AI 168 (405)
T KOG4372|consen 154 FVGHSLGGLVARYAI 168 (405)
T ss_pred eeeeecCCeeeeEEE
Confidence 999999999876543
No 216
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.65 E-value=0.023 Score=42.67 Aligned_cols=59 Identities=19% Similarity=0.356 Sum_probs=45.4
Q ss_pred CCcEEEEecCCCCccCcchHHHHHhhCCC-----CeEEEecCCCccCc--cc--HHHHHHHHHHHHHh
Q 020932 250 ECSVLTIHGSSDKIIPLQDAHEFDKIIPN-----HKLHVVEGANHGYT--NH--QAELVSVVLDFVKA 308 (319)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----~~~~~~~~~gH~~~--~~--~~~~~~~i~~fl~~ 308 (319)
++++|-|-|++|.++...+.....+.+.+ ...++.+|+||+-. .. .+++...|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 67888899999999998877666665543 45678899999943 22 47788889999875
No 217
>PLN02310 triacylglycerol lipase
Probab=95.29 E-value=0.03 Score=47.51 Aligned_cols=36 Identities=28% Similarity=0.581 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHhCC-CceEEEEEEehhHHHHHHHHhh
Q 020932 141 DDLRAVVQYFCGAN-RAVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 141 ~d~~~~i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
+.+..+++.....+ ..+|.+.|||+||.+|...|..
T Consensus 193 ~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 193 QEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 44444444332222 2479999999999999988754
No 218
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=95.26 E-value=0.07 Score=46.88 Aligned_cols=97 Identities=19% Similarity=0.228 Sum_probs=59.8
Q ss_pred CceEEEEEccCCCCCCC-----hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC----
Q 020932 83 SSEIVVLCHGFRSTKDD-----PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---- 153 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~-----~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---- 153 (319)
++-.|+-+||.|....+ .+.+.++..| |..|+.+|+-=.-+ .-|....+++.-+--|+...
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPE-------aPFPRaleEv~fAYcW~inn~all 464 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPE-------APFPRALEEVFFAYCWAINNCALL 464 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCC-------CCCCcHHHHHHHHHHHHhcCHHHh
Confidence 45578889999854421 3334444444 78999999842211 12233345555555555544
Q ss_pred --CCceEEEEEEehhHHHHHHHHhhc----CC-ccEEEEEecc
Q 020932 154 --NRAVGAILGHSKGGSVVLLYASKY----ND-IRTFVNVSGR 189 (319)
Q Consensus 154 --~~~~i~l~G~S~Gg~~a~~~a~~~----p~-v~~~v~~~~~ 189 (319)
..++|+++|-|.||.+.+..+.+. -. -+++++..++
T Consensus 465 G~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 465 GSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred CcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 457899999999998766555442 22 5788887654
No 219
>PLN02571 triacylglycerol lipase
Probab=95.13 E-value=0.049 Score=46.41 Aligned_cols=20 Identities=35% Similarity=0.395 Sum_probs=18.0
Q ss_pred eEEEEEEehhHHHHHHHHhh
Q 020932 157 VGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 157 ~i~l~G~S~Gg~~a~~~a~~ 176 (319)
+|++.|||+||.+|...|..
T Consensus 227 sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 227 SITICGHSLGAALATLNAVD 246 (413)
T ss_pred cEEEeccchHHHHHHHHHHH
Confidence 68999999999999998865
No 220
>PLN00413 triacylglycerol lipase
Probab=95.11 E-value=0.035 Score=47.83 Aligned_cols=22 Identities=27% Similarity=0.539 Sum_probs=19.3
Q ss_pred CCceEEEEEEehhHHHHHHHHh
Q 020932 154 NRAVGAILGHSKGGSVVLLYAS 175 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~ 175 (319)
+..++++.|||+||.+|..+|.
T Consensus 282 p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 282 PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCCeEEEEecCHHHHHHHHHHH
Confidence 5568999999999999998875
No 221
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.03 E-value=1.2 Score=38.68 Aligned_cols=110 Identities=14% Similarity=0.089 Sum_probs=61.0
Q ss_pred CceEEEEEEeCC--CceEEEEEccCCCCCCChhHHHHHHHHHHcCceE-EEEcCCCCCCCCCCCCCCChHHHHhHHH---
Q 020932 71 GERLVGVLHDAE--SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISA-FRFDFAGNGESEGSFQYGNYWREADDLR--- 144 (319)
Q Consensus 71 g~~l~~~~~~~~--~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v-~~~d~~G~G~s~~~~~~~~~~~~~~d~~--- 144 (319)
+..+.++ +.|| +.|..|++.|+-. .+.+.-..+.+.| |... +.-|.|=-|.+= +..-+.+-+.+.
T Consensus 275 reEi~yY-FnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaF----YlGs~eyE~~I~~~I 345 (511)
T TIGR03712 275 RQEFIYY-FNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAF----YLGSDEYEQGIINVI 345 (511)
T ss_pred CCeeEEe-cCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeecccccccee----eeCcHHHHHHHHHHH
Confidence 4444443 3444 5677899999876 3323333344444 4443 445776544332 111122333333
Q ss_pred -HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCCccEEEEEecccc
Q 020932 145 -AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFVNVSGRYD 191 (319)
Q Consensus 145 -~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~~~~~~ 191 (319)
..+++|.= +.+.++|-|-|||..-|+.+++... ..++|+--|..+
T Consensus 346 ~~~L~~LgF-~~~qLILSGlSMGTfgAlYYga~l~-P~AIiVgKPL~N 391 (511)
T TIGR03712 346 QEKLDYLGF-DHDQLILSGLSMGTFGALYYGAKLS-PHAIIVGKPLVN 391 (511)
T ss_pred HHHHHHhCC-CHHHeeeccccccchhhhhhcccCC-CceEEEcCcccc
Confidence 44444411 3457999999999999999988752 355555555443
No 222
>PLN02162 triacylglycerol lipase
Probab=94.90 E-value=0.041 Score=47.31 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=18.9
Q ss_pred CCceEEEEEEehhHHHHHHHHh
Q 020932 154 NRAVGAILGHSKGGSVVLLYAS 175 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~ 175 (319)
+..++++.|||+||.+|..+|.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 4558999999999999998765
No 223
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.86 E-value=0.043 Score=47.83 Aligned_cols=36 Identities=31% Similarity=0.556 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHhCC-CceEEEEEEehhHHHHHHHHhh
Q 020932 141 DDLRAVVQYFCGAN-RAVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 141 ~d~~~~i~~l~~~~-~~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
+++..+++.....+ ..+|.+.|||+||.+|...|..
T Consensus 302 ~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 302 EEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44555554443222 2369999999999999988754
No 224
>PLN02408 phospholipase A1
Probab=94.58 E-value=0.056 Score=45.34 Aligned_cols=21 Identities=33% Similarity=0.347 Sum_probs=18.5
Q ss_pred eEEEEEEehhHHHHHHHHhhc
Q 020932 157 VGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 157 ~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
+|.+.|||+||.+|..+|...
T Consensus 201 sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 599999999999999987754
No 225
>PLN02324 triacylglycerol lipase
Probab=94.57 E-value=0.088 Score=44.84 Aligned_cols=20 Identities=30% Similarity=0.370 Sum_probs=17.9
Q ss_pred eEEEEEEehhHHHHHHHHhh
Q 020932 157 VGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 157 ~i~l~G~S~Gg~~a~~~a~~ 176 (319)
+|.+.|||+||.+|+..|..
T Consensus 216 sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred eEEEecCcHHHHHHHHHHHH
Confidence 69999999999999998864
No 226
>PLN02934 triacylglycerol lipase
Probab=94.57 E-value=0.052 Score=47.23 Aligned_cols=33 Identities=24% Similarity=0.484 Sum_probs=24.1
Q ss_pred HHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHh
Q 020932 143 LRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYAS 175 (319)
Q Consensus 143 ~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~ 175 (319)
+...++.+.++ +..++++.|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 44444444443 4558999999999999999875
No 227
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.26 E-value=0.37 Score=42.61 Aligned_cols=60 Identities=20% Similarity=0.368 Sum_probs=47.6
Q ss_pred CCcEEEEecCCCCccCcchHHHHHhhC----CC--------CeEEEecCCCccCc---ccHHHHHHHHHHHHHhh
Q 020932 250 ECSVLTIHGSSDKIIPLQDAHEFDKII----PN--------HKLHVVEGANHGYT---NHQAELVSVVLDFVKAS 309 (319)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~~~~~~~~----~~--------~~~~~~~~~gH~~~---~~~~~~~~~i~~fl~~~ 309 (319)
...+++.||..|.++|+..+..+++.. .. .++..+||.+|+.- ..+-.....+.+|+++-
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 578999999999999999887776543 21 47899999999953 33457888999999864
No 228
>PLN02719 triacylglycerol lipase
Probab=94.17 E-value=0.073 Score=46.38 Aligned_cols=21 Identities=33% Similarity=0.469 Sum_probs=18.3
Q ss_pred ceEEEEEEehhHHHHHHHHhh
Q 020932 156 AVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 156 ~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
.+|.+.|||+||.+|..+|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 379999999999999998754
No 229
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.14 E-value=0.32 Score=38.23 Aligned_cols=78 Identities=17% Similarity=0.197 Sum_probs=42.0
Q ss_pred CceEEEEcCCCC-CCCCCCCCCCChHHHH----hHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc---C----Cc
Q 020932 113 GISAFRFDFAGN-GESEGSFQYGNYWREA----DDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY---N----DI 180 (319)
Q Consensus 113 G~~v~~~d~~G~-G~s~~~~~~~~~~~~~----~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~---p----~v 180 (319)
|+.+..+++|.. +--.+ ....++++.+ +.+.++|+.... ..++++++|+|+|+.++...+.+. + +.
T Consensus 2 ~~~~~~V~YPa~f~P~~g-~~~~t~~~Sv~~G~~~L~~ai~~~~~-~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~ 79 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTG-IGSPTYDESVAEGVANLDAAIRAAIA-AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDD 79 (225)
T ss_pred CcceEEecCCchhcCcCC-CCCCccchHHHHHHHHHHHHHHhhcc-CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCc
Confidence 577788888751 11111 1111222222 333333332211 456799999999999998877654 1 13
Q ss_pred cEEEEEeccccc
Q 020932 181 RTFVNVSGRYDL 192 (319)
Q Consensus 181 ~~~v~~~~~~~~ 192 (319)
-.+|+++-+...
T Consensus 80 l~fVl~gnP~rp 91 (225)
T PF08237_consen 80 LSFVLIGNPRRP 91 (225)
T ss_pred eEEEEecCCCCC
Confidence 356666654433
No 230
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.07 E-value=0.11 Score=43.34 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=30.1
Q ss_pred CCceEEEEEEehhHHHHHHHHhhcC-----C-ccEEEEEeccccc
Q 020932 154 NRAVGAILGHSKGGSVVLLYASKYN-----D-IRTFVNVSGRYDL 192 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~~~p-----~-v~~~v~~~~~~~~ 192 (319)
+..+|.|+|||+|+.+....+.... . |+.+++++++...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 6668999999999999877655432 2 7999999887654
No 231
>PLN02753 triacylglycerol lipase
Probab=93.94 E-value=0.14 Score=44.92 Aligned_cols=21 Identities=33% Similarity=0.485 Sum_probs=18.5
Q ss_pred ceEEEEEEehhHHHHHHHHhh
Q 020932 156 AVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 156 ~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
.+|.+.|||+||.+|...|..
T Consensus 312 ~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 479999999999999998753
No 232
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=93.90 E-value=0.15 Score=48.86 Aligned_cols=96 Identities=13% Similarity=0.112 Sum_probs=60.1
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC-CCCCCCChHHHHhHHHHHHHHHHhCCCceEEE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE-GSFQYGNYWREADDLRAVVQYFCGANRAVGAI 160 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~-~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l 160 (319)
...|++.|+|..-+.. .....++..| ..|-+|.-. ......+++..+.-....++.++ +..+..+
T Consensus 2121 se~~~~Ffv~pIEG~t--t~l~~la~rl----------e~PaYglQ~T~~vP~dSies~A~~yirqirkvQ--P~GPYrl 2186 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFT--TALESLASRL----------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQ--PEGPYRL 2186 (2376)
T ss_pred ccCCceEEEeccccch--HHHHHHHhhc----------CCcchhhhccccCCcchHHHHHHHHHHHHHhcC--CCCCeee
Confidence 3678999999998866 3355555444 233333322 22233454444444444444332 4457899
Q ss_pred EEEehhHHHHHHHHhhcCC---ccEEEEEecccc
Q 020932 161 LGHSKGGSVVLLYASKYND---IRTFVNVSGRYD 191 (319)
Q Consensus 161 ~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~ 191 (319)
+|+|+|+.++..+|....+ ...+|++++...
T Consensus 2187 ~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2187 AGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred eccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 9999999999998876543 777999887543
No 233
>PLN02802 triacylglycerol lipase
Probab=93.78 E-value=0.099 Score=45.58 Aligned_cols=21 Identities=33% Similarity=0.488 Sum_probs=18.4
Q ss_pred eEEEEEEehhHHHHHHHHhhc
Q 020932 157 VGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 157 ~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
+|++.|||+||.+|..+|...
T Consensus 331 sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 331 SITVTGHSLGAALALLVADEL 351 (509)
T ss_pred eEEEeccchHHHHHHHHHHHH
Confidence 689999999999999887654
No 234
>PLN02847 triacylglycerol lipase
Probab=93.75 E-value=0.46 Score=42.43 Aligned_cols=23 Identities=30% Similarity=0.313 Sum_probs=19.0
Q ss_pred CCceEEEEEEehhHHHHHHHHhh
Q 020932 154 NRAVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
+.-+++++|||+||.+|..++..
T Consensus 249 PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHH
Confidence 34479999999999999887664
No 235
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=93.66 E-value=0.91 Score=33.85 Aligned_cols=40 Identities=15% Similarity=0.186 Sum_probs=34.8
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
+.++.+|++-|+.++..+.....+.+.|...|+.++.+|=
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 4678999999999988766778889999999999999984
No 236
>PLN02761 lipase class 3 family protein
Probab=93.58 E-value=0.12 Score=45.31 Aligned_cols=21 Identities=33% Similarity=0.396 Sum_probs=18.1
Q ss_pred ceEEEEEEehhHHHHHHHHhh
Q 020932 156 AVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 156 ~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
-+|.+.|||+||.+|...|..
T Consensus 294 ~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 369999999999999988753
No 237
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.06 E-value=0.14 Score=42.98 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=26.0
Q ss_pred HHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc
Q 020932 138 READDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 138 ~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
.+.+++..+++.. ..-+|.+.|||+||.+|..+|..-
T Consensus 156 ~~~~~~~~L~~~~---~~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 156 GLDAELRRLIELY---PNYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHhc---CCcEEEEecCChHHHHHHHHHHHH
Confidence 3344555555544 445799999999999999877653
No 238
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=92.03 E-value=0.2 Score=44.33 Aligned_cols=80 Identities=20% Similarity=0.204 Sum_probs=54.1
Q ss_pred HHcCceEEEEcCCCCCCCCC--CCC-CCChHHH-----------HhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHh
Q 020932 110 QNEGISAFRFDFAGNGESEG--SFQ-YGNYWRE-----------ADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYAS 175 (319)
Q Consensus 110 ~~~G~~v~~~d~~G~G~s~~--~~~-~~~~~~~-----------~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~ 175 (319)
..+||.++.-|- ||..+.. ... ..+.+.. ..-..++++..-.+.++.-+..|.|-||.-++..|.
T Consensus 56 ~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 56 LARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred hhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHH
Confidence 456999999995 6654432 111 1121111 122234444444446777899999999999999999
Q ss_pred hcCC-ccEEEEEeccc
Q 020932 176 KYND-IRTFVNVSGRY 190 (319)
Q Consensus 176 ~~p~-v~~~v~~~~~~ 190 (319)
++|+ ++++|.-+|..
T Consensus 135 ryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 135 RYPEDFDGILAGAPAI 150 (474)
T ss_pred hChhhcCeEEeCCchH
Confidence 9999 99999998854
No 239
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=91.21 E-value=0.41 Score=32.92 Aligned_cols=28 Identities=14% Similarity=0.171 Sum_probs=16.5
Q ss_pred CCceEEEEEEeCC--CceEEEEEccCCCCC
Q 020932 70 YGERLVGVLHDAE--SSEIVVLCHGFRSTK 97 (319)
Q Consensus 70 dg~~l~~~~~~~~--~~~~vv~~hG~~~~~ 97 (319)
+|..|+.....+. +..+||++||+.++-
T Consensus 76 ~g~~iHFih~rs~~~~aiPLll~HGWPgSf 105 (112)
T PF06441_consen 76 DGLDIHFIHVRSKRPNAIPLLLLHGWPGSF 105 (112)
T ss_dssp TTEEEEEEEE--S-TT-EEEEEE--SS--G
T ss_pred eeEEEEEEEeeCCCCCCeEEEEECCCCccH
Confidence 4888887665543 556899999999986
No 240
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.16 E-value=0.33 Score=38.83 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=24.8
Q ss_pred HHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhc
Q 020932 143 LRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 143 ~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
..+++..+++. ...++.+.|||+||.+|..+..++
T Consensus 262 ~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 262 ALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 33444444333 455799999999999999877765
No 241
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.16 E-value=0.33 Score=38.83 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=24.8
Q ss_pred HHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhc
Q 020932 143 LRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 143 ~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
..+++..+++. ...++.+.|||+||.+|..+..++
T Consensus 262 ~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 262 ALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 33444444333 455799999999999999877765
No 242
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=90.76 E-value=2.4 Score=29.78 Aligned_cols=73 Identities=14% Similarity=0.069 Sum_probs=43.6
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCce---EEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGIS---AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVG 158 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i 158 (319)
.++|.|+-+||+.|+..++.-+-+++.|-..|.. |..+...-| -+.......+.+++...|......-...+
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~h-----FP~~~~v~~Yk~~L~~~I~~~v~~C~rsl 124 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHH-----FPHNSNVDEYKEQLKSWIRGNVSRCPRSL 124 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeeccccc-----CCCchHHHHHHHHHHHHHHHHHHhCCcCe
Confidence 4788999999999999776667778887766643 222221111 11223445566777777765555433334
Q ss_pred E
Q 020932 159 A 159 (319)
Q Consensus 159 ~ 159 (319)
.
T Consensus 125 F 125 (127)
T PF06309_consen 125 F 125 (127)
T ss_pred e
Confidence 3
No 243
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=90.19 E-value=2.8 Score=34.26 Aligned_cols=94 Identities=18% Similarity=0.337 Sum_probs=54.3
Q ss_pred ceEEEEEccCCCCCCChh----HHHHHHHH-HHcCceEEEEcCCCCCCC--------CCCCC---CCCh-HHHHhHHHHH
Q 020932 84 SEIVVLCHGFRSTKDDPS----MVNLAVAL-QNEGISAFRFDFAGNGES--------EGSFQ---YGNY-WREADDLRAV 146 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~----~~~~~~~l-~~~G~~v~~~d~~G~G~s--------~~~~~---~~~~-~~~~~d~~~~ 146 (319)
+..|||+=|.+.+..... ...+.+.+ ...+-..+.+=.+|.|.. ..... ...+ ....+.+..+
T Consensus 1 k~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~a 80 (277)
T PF09994_consen 1 KRIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDA 80 (277)
T ss_pred CcEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHH
Confidence 356888888887764321 23445555 222334555566777761 11100 0011 2223455555
Q ss_pred HHHHHhC--CCceEEEEEEehhHHHHHHHHhhc
Q 020932 147 VQYFCGA--NRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 147 i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
..++.+. ..++|.++|+|-|+.+|-.++..-
T Consensus 81 y~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 81 YRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 6656444 566899999999999999887654
No 244
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=89.71 E-value=3.6 Score=33.89 Aligned_cols=118 Identities=19% Similarity=0.133 Sum_probs=73.3
Q ss_pred CCceEEEEEEeCC-----CceEEEEEccCCCCCCChhHHHHH--------------HHHHHcCceEEEEcCC-CCCCCCC
Q 020932 70 YGERLVGVLHDAE-----SSEIVVLCHGFRSTKDDPSMVNLA--------------VALQNEGISAFRFDFA-GNGESEG 129 (319)
Q Consensus 70 dg~~l~~~~~~~~-----~~~~vv~~hG~~~~~~~~~~~~~~--------------~~l~~~G~~v~~~d~~-G~G~s~~ 129 (319)
++..+.+|++... .+|..+.+.|..+.+.. -+..+. -.|.. -.++.+|-| |.|.|--
T Consensus 12 ~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSst-G~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyV 88 (414)
T KOG1283|consen 12 TGAHMFWWLYYATANVKSERPLALWLQGGPGASST-GFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYV 88 (414)
T ss_pred cCceEEEEEeeeccccccCCCeeEEecCCCCCCCc-CccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeee
Confidence 4667777666432 56788889888765532 122221 12333 367777766 6676642
Q ss_pred C--CCC-CChHHHHhHHHHHHHHHHhC----CCceEEEEEEehhHHHHHHHHhhcCC----------ccEEEEEeccc
Q 020932 130 S--FQY-GNYWREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASKYND----------IRTFVNVSGRY 190 (319)
Q Consensus 130 ~--~~~-~~~~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~p~----------v~~~v~~~~~~ 190 (319)
. ..+ .+..+.+.|+.++++.+-.. ...+++|+..|+||-+|..++....+ +.++++=.++.
T Consensus 89 dg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 89 DGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred cCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 2 211 24456678888888877665 34579999999999999887765421 45666655543
No 245
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=87.29 E-value=1.6 Score=38.19 Aligned_cols=59 Identities=19% Similarity=0.330 Sum_probs=45.5
Q ss_pred CcEEEEecCCCCccCcchHHHHHhhCC-------------------------CCeEEEecCCCccC-cccHHHHHHHHHH
Q 020932 251 CSVLTIHGSSDKIIPLQDAHEFDKIIP-------------------------NHKLHVVEGANHGY-TNHQAELVSVVLD 304 (319)
Q Consensus 251 ~P~l~i~g~~D~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~gH~~-~~~~~~~~~~i~~ 304 (319)
.++++..|+.|-++|.-..+.+.+.+. +..+..+.|+||.. ...++.....+.+
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 799999999999999887777644331 12357778999984 6677888899999
Q ss_pred HHHhh
Q 020932 305 FVKAS 309 (319)
Q Consensus 305 fl~~~ 309 (319)
||...
T Consensus 444 fl~g~ 448 (454)
T KOG1282|consen 444 FLNGQ 448 (454)
T ss_pred HHcCC
Confidence 99763
No 246
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.06 E-value=1.1 Score=39.97 Aligned_cols=50 Identities=20% Similarity=0.182 Sum_probs=33.4
Q ss_pred HhHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHhhc-----CC-------ccEEEEEecc
Q 020932 140 ADDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYASKY-----ND-------IRTFVNVSGR 189 (319)
Q Consensus 140 ~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~~~-----p~-------v~~~v~~~~~ 189 (319)
+.-..++++.+... +..+|+.+||||||.++=.++..- |+ -.++|.++.+
T Consensus 507 ~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 507 AARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 44455666666655 356899999999999876655432 32 5677777654
No 247
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.90 E-value=1.7 Score=38.12 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=32.2
Q ss_pred CCCceEEEEEEehhHHHHHHHHhhc---CC---ccEEEEEeccccccc
Q 020932 153 ANRAVGAILGHSKGGSVVLLYASKY---ND---IRTFVNVSGRYDLKG 194 (319)
Q Consensus 153 ~~~~~i~l~G~S~Gg~~a~~~a~~~---p~---v~~~v~~~~~~~~~~ 194 (319)
++.++|.|+|+|+|+.+....+... .+ |..+++++++.....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~ 491 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKA 491 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCH
Confidence 3788999999999999987655432 22 889999998776543
No 248
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=85.74 E-value=5.1 Score=32.46 Aligned_cols=38 Identities=16% Similarity=0.027 Sum_probs=27.6
Q ss_pred CCceEEEEEEehhHHHHHHHHhhcC---C-ccEEEEEecccc
Q 020932 154 NRAVGAILGHSKGGSVVLLYASKYN---D-IRTFVNVSGRYD 191 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~~~p---~-v~~~v~~~~~~~ 191 (319)
...+++|.|.|+|++-+...-.... + +++.+..+++..
T Consensus 107 ~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 107 RRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred cCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 4558999999999987665433322 2 899999888654
No 249
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=84.01 E-value=11 Score=25.43 Aligned_cols=82 Identities=15% Similarity=0.117 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCCh-HHHHhHHHHHHHHHHhCCCceEEEEEEehhHH--HHHHHHhhc
Q 020932 101 SMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNY-WREADDLRAVVQYFCGANRAVGAILGHSKGGS--VVLLYASKY 177 (319)
Q Consensus 101 ~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~-~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~--~a~~~a~~~ 177 (319)
.+..+.+.+..+|+..-.+.++..|.+....-...- +.-..-+..+++.. ...+++++|-|--.= +-..+|.++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~f---P~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDF---PERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHC---CCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 456666777777888777778777655332211111 12344555666655 667899999996543 344567788
Q ss_pred CC-ccEEEE
Q 020932 178 ND-IRTFVN 185 (319)
Q Consensus 178 p~-v~~~v~ 185 (319)
|+ |.++.+
T Consensus 89 P~~i~ai~I 97 (100)
T PF09949_consen 89 PGRILAIYI 97 (100)
T ss_pred CCCEEEEEE
Confidence 98 776643
No 250
>PF03283 PAE: Pectinacetylesterase
Probab=82.81 E-value=5.9 Score=33.81 Aligned_cols=35 Identities=31% Similarity=0.303 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHhC---CCceEEEEEEehhHHHHHHHHh
Q 020932 141 DDLRAVVQYFCGA---NRAVGAILGHSKGGSVVLLYAS 175 (319)
Q Consensus 141 ~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~a~~~a~ 175 (319)
..+.+++++|... +.++|+|.|.|.||.-++..+-
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 5577888887765 4578999999999998876544
No 251
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=81.09 E-value=3.6 Score=35.99 Aligned_cols=105 Identities=13% Similarity=0.049 Sum_probs=54.4
Q ss_pred CceEEEEEccCCCCCCC-hhHHHHHHHHHHcC-ceEEEEcCCC--C-----CCCCCCCCCCChHHHHhHHHHHHHHHHhC
Q 020932 83 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEG-ISAFRFDFAG--N-----GESEGSFQYGNYWREADDLRAVVQYFCGA 153 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G-~~v~~~d~~G--~-----G~s~~~~~~~~~~~~~~d~~~~i~~l~~~ 153 (319)
+..++|.+-|.|.-+.+ ..-..-.+.|+..+ ..|+.+++|= + +..+..+..... -|-.-+++|+++.
T Consensus 134 n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl----~DQqLAl~WV~~N 209 (601)
T KOG4389|consen 134 NLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGL----LDQQLALQWVQEN 209 (601)
T ss_pred CceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccch----HHHHHHHHHHHHh
Confidence 44467777776643321 11112234555543 3455666651 1 122222222222 2334456676665
Q ss_pred ------CCceEEEEEEehhHHHHH-HHHhhcC-C-ccEEEEEecccc
Q 020932 154 ------NRAVGAILGHSKGGSVVL-LYASKYN-D-IRTFVNVSGRYD 191 (319)
Q Consensus 154 ------~~~~i~l~G~S~Gg~~a~-~~a~~~p-~-v~~~v~~~~~~~ 191 (319)
++++|.|+|.|.|+.-.. ++.+-.. . ++..|+-++..+
T Consensus 210 i~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 210 IAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred HHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 677999999999997433 3332111 1 777777766544
No 252
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=79.58 E-value=13 Score=28.78 Aligned_cols=62 Identities=16% Similarity=0.259 Sum_probs=41.7
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCc-eEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGI-SAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 161 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 161 (319)
..-+|++.||...++.. .|.-+-..|.++|| .|+....-|+ -++..+|+++++.+.+.+.|+
T Consensus 137 ~e~~vlmgHGt~h~s~~-~YacLd~~~~~~~f~~v~v~~ve~y----------------P~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 137 DEILVLMGHGTDHHSNA-AYACLDHVLDEYGFDNVFVAAVEGY----------------PLVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred CeEEEEEecCCCccHHH-HHHHHHHHHHhcCCCceEEEEecCC----------------CcHHHHHHHHHHcCCceEEEe
Confidence 34578889998887742 45556666778888 5666554332 235677888888777776665
No 253
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=79.31 E-value=29 Score=29.97 Aligned_cols=98 Identities=13% Similarity=0.082 Sum_probs=60.4
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCC-----------------------CChHHHHhH
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY-----------------------GNYWREADD 142 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~-----------------------~~~~~~~~d 142 (319)
+|++ =|...+.. ..+..+.+.+.+.|..++.+|.-=.|......+. ...+.+.+-
T Consensus 3 tI~i-igT~DTK~-~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~g 80 (403)
T PF06792_consen 3 TIAI-IGTLDTKG-EELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARG 80 (403)
T ss_pred EEEE-EEccCCCH-HHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHH
Confidence 3444 35555553 3567778888889999999997544433321110 011222344
Q ss_pred HHHHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEE
Q 020932 143 LRAVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVN 185 (319)
Q Consensus 143 ~~~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~ 185 (319)
+..++..+.++ ..+-|+-+|-|.|..++..+....|= +-++++
T Consensus 81 a~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 81 AARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 45555555443 35568889999999999998888775 555554
No 254
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=79.28 E-value=3.4 Score=30.40 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=30.5
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
++.||++-|..++..+..-..+.+.|.+.|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 47899999999988655667888889999999999984
No 255
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=78.78 E-value=5.6 Score=25.00 Aligned_cols=41 Identities=15% Similarity=0.191 Sum_probs=31.1
Q ss_pred HHHHhHHHHHHHHHHhC----CCceEEEEEEehhHHHHHHHHhhc
Q 020932 137 WREADDLRAVVQYFCGA----NRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 137 ~~~~~d~~~~i~~l~~~----~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
....+.+...|++++.+ +++++.++|-|-|=.+|.+.++.+
T Consensus 17 ~GC~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 17 VGCARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 34467788888888775 668899999999999998877765
No 256
>PRK02399 hypothetical protein; Provisional
Probab=78.59 E-value=34 Score=29.57 Aligned_cols=97 Identities=16% Similarity=0.115 Sum_probs=59.6
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCC----------CC-------------ChHHHHhHHH
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQ----------YG-------------NYWREADDLR 144 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~----------~~-------------~~~~~~~d~~ 144 (319)
|++=|...+.. ..+..+.+.+.++|..|+.+|.-..|......+ .. ..+.+.+-+.
T Consensus 6 I~iigT~DTK~-~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~ 84 (406)
T PRK02399 6 IYIAGTLDTKG-EELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAA 84 (406)
T ss_pred EEEEeccCCcH-HHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHH
Confidence 45556666664 245666777788899999999844432211000 00 0122234444
Q ss_pred HHHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC-ccEEEE
Q 020932 145 AVVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFVN 185 (319)
Q Consensus 145 ~~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~ 185 (319)
.++..|.++ ..+-++-+|-|.|..++..+....|= +-++++
T Consensus 85 ~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 85 AFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 555544444 46678899999999999998888875 555554
No 257
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=75.79 E-value=42 Score=27.98 Aligned_cols=94 Identities=16% Similarity=0.146 Sum_probs=58.1
Q ss_pred CceEEEEEccCCCCCCC---hhHHHHHHHHHH-cCceEEEEcCCCCCCCCCCCC----------C-CC--hHHHHhHHHH
Q 020932 83 SSEIVVLCHGFRSTKDD---PSMVNLAVALQN-EGISAFRFDFAGNGESEGSFQ----------Y-GN--YWREADDLRA 145 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~---~~~~~~~~~l~~-~G~~v~~~d~~G~G~s~~~~~----------~-~~--~~~~~~d~~~ 145 (319)
.+..|+++-|....-.. .-...+...|.+ .|.+++++=-+|.|.-.-... . .+ -....+.+..
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~ 109 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIRE 109 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 56677888775432211 113456666666 578888888888886521110 0 00 0123456666
Q ss_pred HHHHHHhC--CCceEEEEEEehhHHHHHHHHhh
Q 020932 146 VVQYFCGA--NRAVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 146 ~i~~l~~~--~~~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
+-..|... ..++|+++|+|-|++.|--+|..
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 66666555 56789999999999998877765
No 258
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=73.66 E-value=5.7 Score=29.77 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=26.2
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcC
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 178 (319)
-+++.|.+++...-.+.|-|.|+.++..++...+
T Consensus 15 Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 4555665656665689999999999999988754
No 259
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=72.32 E-value=53 Score=26.90 Aligned_cols=106 Identities=12% Similarity=0.136 Sum_probs=58.9
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC--C----CCCCC-----------------CCCC--CCChH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA--G----NGESE-----------------GSFQ--YGNYW 137 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~--G----~G~s~-----------------~~~~--~~~~~ 137 (319)
.+|++|++=|..++....+.+++...+...+-..+.+++- - ++..- ++.. ..+..
T Consensus 17 ~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLDPAv~~vpy~aniDIRDtVkYkEvMkqY~LGPNGgI~TsLN 96 (366)
T KOG1532|consen 17 QRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLDPAVRNVPYPANIDIRDTVKYKEVMKQYQLGPNGGIVTSLN 96 (366)
T ss_pred cCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCCHHHhcCCCccCCchhhhhhHHHHHHHhCCCCCcchhhhHH
Confidence 6788888889888886667788888887775544444331 0 11000 1110 11222
Q ss_pred HHHhHHHHHHHHHHh---C-------CCceEEEEEEehhHHHHHHHH-hhcCCccEEEEEec
Q 020932 138 READDLRAVVQYFCG---A-------NRAVGAILGHSKGGSVVLLYA-SKYNDIRTFVNVSG 188 (319)
Q Consensus 138 ~~~~d~~~~i~~l~~---~-------~~~~i~l~G~S~Gg~~a~~~a-~~~p~v~~~v~~~~ 188 (319)
-.+.-+..+++.+.+ . .+..|-++-||..|.+..... ..+|.|-..|.-.+
T Consensus 97 LF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~lass~ptvv~YvvDt~ 158 (366)
T KOG1532|consen 97 LFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLASSFPTVVVYVVDTP 158 (366)
T ss_pred HHHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhhcCCeEEEEEecCC
Confidence 223333433333333 2 356788899998888777654 44565555554444
No 260
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=71.30 E-value=13 Score=30.53 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=24.8
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCc
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGI 114 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~ 114 (319)
..+|.++=+||+.|+..++.-.-+++.+-..|-
T Consensus 107 p~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~Gl 139 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYVAEIIAENLYRGGL 139 (344)
T ss_pred CCCCeEEEecCCCCCchhHHHHHHHHHHHhccc
Confidence 368899999999999976555666666665553
No 261
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=70.79 E-value=6.7 Score=32.63 Aligned_cols=62 Identities=24% Similarity=0.264 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc
Q 020932 101 SMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 101 ~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
.+.++++.|.... .-++++ |-|. . .---.-+++.|.+.+...=.++|.|+|+.++..++...
T Consensus 3 d~~rl~r~l~~~~-~gLvL~--GGG~----------R--G~ahiGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 3 DFSRLARVLTGNS-IALVLG--GGGA----------R--GCAHIGVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred hHHHHHHHhcCCC-EEEEEC--ChHH----------H--HHHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 3677888887663 233333 2110 0 11123455666666766558999999999999999874
No 262
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=70.44 E-value=7.5 Score=29.71 Aligned_cols=33 Identities=21% Similarity=0.213 Sum_probs=25.3
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
.+++.+.+.+...=.+.|-|.||.+|..++...
T Consensus 16 Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 455666555655568999999999999998764
No 263
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=70.16 E-value=31 Score=26.63 Aligned_cols=65 Identities=22% Similarity=0.267 Sum_probs=39.9
Q ss_pred CceEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHh
Q 020932 83 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCG 152 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~ 152 (319)
.+++++++||.....-. ..-..+.+.|.+.|..+...-+++.|..-. ......+-...+++|+.+
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~-----~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG-----NPENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT-----SHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC-----CchhHHHHHHHHHHHHHH
Confidence 46899999998765421 345678888999888777777665444111 122333445555566543
No 264
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=69.68 E-value=34 Score=26.30 Aligned_cols=73 Identities=14% Similarity=0.144 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcC---C
Q 020932 103 VNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN---D 179 (319)
Q Consensus 103 ~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~ 179 (319)
....+.+..++++++.+|-+|....+ ....+++..+++.+ ....++++=-+..+.-.+..+..+- .
T Consensus 73 ~~~l~~~~~~~~D~vlIDT~Gr~~~d--------~~~~~el~~~~~~~---~~~~~~LVlsa~~~~~~~~~~~~~~~~~~ 141 (196)
T PF00448_consen 73 REALEKFRKKGYDLVLIDTAGRSPRD--------EELLEELKKLLEAL---NPDEVHLVLSATMGQEDLEQALAFYEAFG 141 (196)
T ss_dssp HHHHHHHHHTTSSEEEEEE-SSSSTH--------HHHHHHHHHHHHHH---SSSEEEEEEEGGGGGHHHHHHHHHHHHSS
T ss_pred HHHHHHHhhcCCCEEEEecCCcchhh--------HHHHHHHHHHhhhc---CCccceEEEecccChHHHHHHHHHhhccc
Confidence 34455666778999999998764321 44466777777766 5556766655555555554444432 2
Q ss_pred ccEEEEE
Q 020932 180 IRTFVNV 186 (319)
Q Consensus 180 v~~~v~~ 186 (319)
+.++|+-
T Consensus 142 ~~~lIlT 148 (196)
T PF00448_consen 142 IDGLILT 148 (196)
T ss_dssp TCEEEEE
T ss_pred CceEEEE
Confidence 7888864
No 265
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=69.48 E-value=33 Score=29.96 Aligned_cols=73 Identities=16% Similarity=0.130 Sum_probs=53.1
Q ss_pred HHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC---
Q 020932 103 VNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND--- 179 (319)
Q Consensus 103 ~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~--- 179 (319)
..-.+.+...+|+|+.+|--|.=.- -+.+.+.+.++-+.+ .++.+.+|--++=|.-|...|..+.+
T Consensus 172 k~al~~ak~~~~DvvIvDTAGRl~i--------de~Lm~El~~Ik~~~---~P~E~llVvDam~GQdA~~~A~aF~e~l~ 240 (451)
T COG0541 172 KAALEKAKEEGYDVVIVDTAGRLHI--------DEELMDELKEIKEVI---NPDETLLVVDAMIGQDAVNTAKAFNEALG 240 (451)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccc--------cHHHHHHHHHHHhhc---CCCeEEEEEecccchHHHHHHHHHhhhcC
Confidence 4445666777889999997653211 144455566665555 78889999999999999999998876
Q ss_pred ccEEEEE
Q 020932 180 IRTFVNV 186 (319)
Q Consensus 180 v~~~v~~ 186 (319)
+.++|+-
T Consensus 241 itGvIlT 247 (451)
T COG0541 241 ITGVILT 247 (451)
T ss_pred CceEEEE
Confidence 8888875
No 266
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=69.47 E-value=8.9 Score=30.18 Aligned_cols=33 Identities=27% Similarity=0.212 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
-+++.+.+.+.+.-.+.|-|.|+.+|..+|...
T Consensus 17 GvL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 17 GFLAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 345555555655558999999999999998754
No 267
>PRK10279 hypothetical protein; Provisional
Probab=69.21 E-value=7.2 Score=32.31 Aligned_cols=33 Identities=21% Similarity=0.234 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
-+++.|.+.+...-.+.|.|+|+.++..+|...
T Consensus 22 GVL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 22 GVINALKKVGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 456666666777668999999999999998754
No 268
>PRK12467 peptide synthase; Provisional
Probab=69.04 E-value=21 Score=41.12 Aligned_cols=95 Identities=16% Similarity=0.061 Sum_probs=61.9
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEe
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 164 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 164 (319)
+.+++.|...++. +.+..+...|.. +..++.+..++.-... ....++...+....+.+.+.+. ..+..+.|+|
T Consensus 3693 ~~l~~~h~~~r~~--~~~~~l~~~l~~-~~~~~~l~~~~~~~d~--~~~~~~~~~~~~y~~~~~~~~~--~~p~~l~g~s 3765 (3956)
T PRK12467 3693 PALFCRHEGLGTV--FDYEPLAVILEG-DRHVLGLTCRHLLDDG--WQDTSLQAMAVQYADYILWQQA--KGPYGLLGWS 3765 (3956)
T ss_pred cceeeechhhcch--hhhHHHHHHhCC-CCcEEEEecccccccc--CCccchHHHHHHHHHHHHHhcc--CCCeeeeeee
Confidence 5599999998887 556777777754 3678887766542111 1223455566666666666543 3457899999
Q ss_pred hhHHHHHHHHhhc---CC-ccEEEEE
Q 020932 165 KGGSVVLLYASKY---ND-IRTFVNV 186 (319)
Q Consensus 165 ~Gg~~a~~~a~~~---p~-v~~~v~~ 186 (319)
+||.++..++... .+ +..+.++
T Consensus 3766 ~g~~~a~~~~~~l~~~g~~~~~~~~~ 3791 (3956)
T PRK12467 3766 LGGTLARLVAELLEREGESEAFLGLF 3791 (3956)
T ss_pred cchHHHHHHHHHHHHcCCceeEEEEE
Confidence 9999998877653 23 5544444
No 269
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=67.91 E-value=28 Score=30.08 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=29.4
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES 127 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s 127 (319)
|||+|...-.. +..+++.|.++|+.|..+-..+.+..
T Consensus 2 il~~~~~~p~~----~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFPGQ----FRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCchh----HHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 78888876643 78999999999999998877665543
No 270
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=65.62 E-value=10 Score=30.81 Aligned_cols=33 Identities=33% Similarity=0.297 Sum_probs=25.3
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
-+++.+.+.+..-=.+.|.|+|+.++..+|...
T Consensus 27 GVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 455666555666458999999999999998864
No 271
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=64.74 E-value=9.8 Score=31.67 Aligned_cols=33 Identities=30% Similarity=0.402 Sum_probs=26.5
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
-+++.|.+.+...-.+.|-|+|+.++..+|...
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 355566566777789999999999999999864
No 272
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=63.99 E-value=15 Score=27.61 Aligned_cols=34 Identities=26% Similarity=0.255 Sum_probs=25.1
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcC
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 178 (319)
-+++.+.+++...=.+.|-|.|+.+|..++...+
T Consensus 17 Gvl~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 17 GVLRALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3455555555554589999999999999887654
No 273
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=63.56 E-value=46 Score=27.36 Aligned_cols=52 Identities=10% Similarity=0.100 Sum_probs=36.7
Q ss_pred HhHHHHHHHHHHhC-----CCceEEEEEEehhHHHHHHHHhhcCC---ccEEEEEecccc
Q 020932 140 ADDLRAVVQYFCGA-----NRAVGAILGHSKGGSVVLLYASKYND---IRTFVNVSGRYD 191 (319)
Q Consensus 140 ~~d~~~~i~~l~~~-----~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~v~~~~~~~ 191 (319)
-..+...|++.+.. ++++|.++|-|-|=.+|.+.++.+.. --++..--|...
T Consensus 21 e~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte 80 (398)
T COG3007 21 EANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTE 80 (398)
T ss_pred HHHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCcc
Confidence 45677777877765 67899999999999999988877643 334444444433
No 274
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=63.54 E-value=22 Score=27.62 Aligned_cols=40 Identities=10% Similarity=0.145 Sum_probs=31.5
Q ss_pred CceEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCC
Q 020932 83 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
.++.|.|++-.+.+.+. .+.....+.|.+.|..+.-+++-
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~ 71 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLS 71 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeecc
Confidence 46789999988887753 34577888899999998888863
No 275
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=63.02 E-value=11 Score=31.16 Aligned_cols=32 Identities=22% Similarity=0.242 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhh
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
++.+.+.+.+.++-.++|||+|-+.|+.++..
T Consensus 71 a~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 71 ALARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 34455555577788999999999988776543
No 276
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=62.56 E-value=6.7 Score=32.85 Aligned_cols=32 Identities=25% Similarity=0.308 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhh
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
++.+.++..+..+-.++|||+|=+.|+.++..
T Consensus 73 al~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 73 ALARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 34455666677888999999999988876543
No 277
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=62.47 E-value=84 Score=26.16 Aligned_cols=88 Identities=17% Similarity=0.125 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcCceEEEEcCCCCCCCCCCCCC--CChHHHHhHHHHHHHHHHhCCCceE------EEEEEeh--------
Q 020932 102 MVNLAVALQNEGISAFRFDFAGNGESEGSFQY--GNYWREADDLRAVVQYFCGANRAVG------AILGHSK-------- 165 (319)
Q Consensus 102 ~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~--~~~~~~~~d~~~~i~~l~~~~~~~i------~l~G~S~-------- 165 (319)
-...+..|.+.||.|+++|-.-.|....-... .-+.....|-..+-+.+.+..++-| ..||-|+
T Consensus 13 GSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~ 92 (329)
T COG1087 13 GSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYD 92 (329)
T ss_pred HHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHh
Confidence 45567788889999999998766654422211 1112223333333333333344332 3566663
Q ss_pred ---hHHHHHHHHhhcCCccEEEEEecc
Q 020932 166 ---GGSVVLLYASKYNDIRTFVNVSGR 189 (319)
Q Consensus 166 ---Gg~~a~~~a~~~p~v~~~v~~~~~ 189 (319)
+|.+.+.-+.+.-+|+.+|..++.
T Consensus 93 NNv~gTl~Ll~am~~~gv~~~vFSStA 119 (329)
T COG1087 93 NNVVGTLNLIEAMLQTGVKKFIFSSTA 119 (329)
T ss_pred hchHhHHHHHHHHHHhCCCEEEEecch
Confidence 455555545554559999988764
No 278
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=62.25 E-value=72 Score=24.70 Aligned_cols=71 Identities=15% Similarity=0.038 Sum_probs=44.7
Q ss_pred HHHHHHHcCc-eEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEeh----hHHHHHHHHhhcCC
Q 020932 105 LAVALQNEGI-SAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSK----GGSVVLLYASKYND 179 (319)
Q Consensus 105 ~~~~l~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~----Gg~~a~~~a~~~p~ 179 (319)
..+.+...|. .|+..+.+... .++.+.+++-+.++++.. + ..++++|+|. |..++-.+|++..-
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~~-------~~~~e~~a~al~~~i~~~---~-p~lVL~~~t~~~~~grdlaprlAarLga 136 (202)
T cd01714 68 ALREALAMGADRAILVSDRAFA-------GADTLATAKALAAAIKKI---G-VDLILTGKQSIDGDTGQVGPLLAELLGW 136 (202)
T ss_pred HHHHHHHcCCCEEEEEeccccc-------CCChHHHHHHHHHHHHHh---C-CCEEEEcCCcccCCcCcHHHHHHHHhCC
Confidence 4445556676 57777765322 223355556566655543 4 3589999998 88899888888643
Q ss_pred --ccEEEEE
Q 020932 180 --IRTFVNV 186 (319)
Q Consensus 180 --v~~~v~~ 186 (319)
+..++-+
T Consensus 137 ~lvsdv~~l 145 (202)
T cd01714 137 PQITYVSKI 145 (202)
T ss_pred CccceEEEE
Confidence 5555554
No 279
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=61.85 E-value=17 Score=27.26 Aligned_cols=34 Identities=29% Similarity=0.386 Sum_probs=24.9
Q ss_pred HHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc
Q 020932 144 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 144 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
.-+++.|.+++...=.+.|-|.|+.+|..++...
T Consensus 16 ~Gvl~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 16 IGVLKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3455556555555458999999999999988654
No 280
>COG3494 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=61.52 E-value=41 Score=26.91 Aligned_cols=58 Identities=14% Similarity=0.270 Sum_probs=41.9
Q ss_pred HHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChH-HHHhHHHHHHHHHHhCCCceEEEEE
Q 020932 103 VNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYW-READDLRAVVQYFCGANRAVGAILG 162 (319)
Q Consensus 103 ~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~-~~~~d~~~~i~~l~~~~~~~i~l~G 162 (319)
..+++....+|+.++.+-++|.-+.+ ...+.+. --..++-.++++++.++.+++++.|
T Consensus 18 ~~va~~a~~~G~~~~ii~l~~eaD~~--~~~~e~~~~~iG~vg~lik~l~~~~v~~vVl~G 76 (279)
T COG3494 18 LEVAENARNQGYAPFIIGLRGEADPE--LKEFEYKEVSIGEVGKLIKLLKTEGVDRVVLAG 76 (279)
T ss_pred HHHHHHHHhCCCCcEEEEecCccchh--hhcCCCeEEeHHHHHHHHHHHHHcCCcEEEEec
Confidence 45788889999999999998654432 1111111 2257889999999999888888876
No 281
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=61.32 E-value=38 Score=26.96 Aligned_cols=40 Identities=18% Similarity=0.013 Sum_probs=28.3
Q ss_pred CceEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCC
Q 020932 83 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
.+|.|+|++=.....+. .+...+.+.|.+.|+.+..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 46779999887744321 23466777888889998888765
No 282
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=61.18 E-value=8.2 Score=34.87 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=27.8
Q ss_pred EEEEEEehhHHHHHHHHhhcCC--ccEEEEEecccc
Q 020932 158 GAILGHSKGGSVVLLYASKYND--IRTFVNVSGRYD 191 (319)
Q Consensus 158 i~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~~~~ 191 (319)
|+.-+.|-||..++.+|.+..+ |++++...|...
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~ 322 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVN 322 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccC
Confidence 5666899999999998888766 999999887443
No 283
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function.
Probab=61.11 E-value=54 Score=26.28 Aligned_cols=58 Identities=16% Similarity=0.181 Sum_probs=39.7
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEE
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 161 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 161 (319)
=++++|..++..++..+.+...+.+.|.+++-++- ....++..+++.++..+ .+++|+
T Consensus 54 nvLL~G~rGtGKSSlVkall~~y~~~GLRlIev~k----------------~~L~~l~~l~~~l~~~~-~kFIlf 111 (249)
T PF05673_consen 54 NVLLWGARGTGKSSLVKALLNEYADQGLRLIEVSK----------------EDLGDLPELLDLLRDRP-YKFILF 111 (249)
T ss_pred ceEEecCCCCCHHHHHHHHHHHHhhcCceEEEECH----------------HHhccHHHHHHHHhcCC-CCEEEE
Confidence 35668888877666778888888899988887763 23566777777776543 344444
No 284
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=60.84 E-value=14 Score=28.96 Aligned_cols=34 Identities=24% Similarity=0.128 Sum_probs=25.6
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcC
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 178 (319)
-+++.+.+.+...-.+.|.|.|+..|..++...+
T Consensus 15 Gvl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 15 GVLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3455555556544489999999999999998764
No 285
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=60.44 E-value=13 Score=30.69 Aligned_cols=31 Identities=16% Similarity=0.052 Sum_probs=23.0
Q ss_pred HHHHHHhCCCceEEEEEEehhHHHHHHHHhh
Q 020932 146 VVQYFCGANRAVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 146 ~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
+.+.+++.+..+..++|||+|=+.|+.++..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 3344555577788999999999888876543
No 286
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=58.91 E-value=0.46 Score=38.85 Aligned_cols=108 Identities=16% Similarity=0.065 Sum_probs=62.7
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHh-CCCceEEEE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCG-ANRAVGAIL 161 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~-~~~~~i~l~ 161 (319)
.+..++..||...+... ........+...++.++..|+++++.+.+......+.....++..++.+... ....++.++
T Consensus 87 ~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
T COG1073 87 FGESGGDPRGLADSEGY-AEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVW 165 (299)
T ss_pred ccccccccccccCcccc-ccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccce
Confidence 44567888887555531 2223334455557889999999999887554332222222333333333221 134468999
Q ss_pred EEehhHHHHHHHHhhc----CC-ccEEEEEecccc
Q 020932 162 GHSKGGSVVLLYASKY----ND-IRTFVNVSGRYD 191 (319)
Q Consensus 162 G~S~Gg~~a~~~a~~~----p~-v~~~v~~~~~~~ 191 (319)
|.|+||..++...... ++ ++.++.-++...
T Consensus 166 g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (299)
T COG1073 166 GESLGGALALLLLGANPELARELIDYLITPGGFAP 200 (299)
T ss_pred eeccCceeeccccccchHHHHhhhhhhccCCCCCC
Confidence 9999999988866542 22 455554444333
No 287
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=58.88 E-value=14 Score=30.00 Aligned_cols=41 Identities=7% Similarity=0.237 Sum_probs=34.8
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
+..|+||++.|+.+++.....+.+.+.|-.+|+.|.++.-|
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 45699999999988886667788899999999999999765
No 288
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=58.76 E-value=61 Score=28.54 Aligned_cols=70 Identities=11% Similarity=0.119 Sum_probs=43.4
Q ss_pred HHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC---ccE
Q 020932 106 AVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND---IRT 182 (319)
Q Consensus 106 ~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~ 182 (319)
.+.+...+|.++.+|-+|.-..+ ..+.+.+..+.+.. .+..++++--++-|.-+...+..+.+ +.+
T Consensus 175 l~~~~~~~~DvViIDTaGr~~~d--------~~lm~El~~i~~~~---~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g 243 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRHKQE--------DSLFEEMLQVAEAI---QPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGS 243 (429)
T ss_pred HHHHHhCCCCEEEEECCCCCcch--------HHHHHHHHHHhhhc---CCcEEEEEeccccChhHHHHHHHHHhccCCcE
Confidence 34455568999999999753211 23344444444433 55667888777777766666665532 777
Q ss_pred EEEE
Q 020932 183 FVNV 186 (319)
Q Consensus 183 ~v~~ 186 (319)
+|+-
T Consensus 244 ~IlT 247 (429)
T TIGR01425 244 VIIT 247 (429)
T ss_pred EEEE
Confidence 7764
No 289
>PTZ00445 p36-lilke protein; Provisional
Probab=58.59 E-value=53 Score=25.63 Aligned_cols=65 Identities=15% Similarity=0.043 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHcCceEEEEcCCCC------CCCCCCC-CCC-ChHHHHhHHHHHHHHHHhCCCceEEEEEEehh
Q 020932 101 SMVNLAVALQNEGISAFRFDFAGN------GESEGSF-QYG-NYWREADDLRAVVQYFCGANRAVGAILGHSKG 166 (319)
Q Consensus 101 ~~~~~~~~l~~~G~~v~~~d~~G~------G~s~~~~-~~~-~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~G 166 (319)
....+.+.|.+.|+.+++.|+-.. |....+. ... -......++..++..+.+.+. +|.|+-+|--
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I-~v~VVTfSd~ 102 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNI-KISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCC-eEEEEEccch
Confidence 356788899999999999998432 1111110 000 011124567777887776655 4899999954
No 290
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=58.25 E-value=17 Score=28.94 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=25.1
Q ss_pred HHHHHHHhCCCc--eEEEEEEehhHHHHHHHHhhcC
Q 020932 145 AVVQYFCGANRA--VGAILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 145 ~~i~~l~~~~~~--~i~l~G~S~Gg~~a~~~a~~~p 178 (319)
-+++.|.+++.. .-.+.|-|.|+.++..++...+
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 355666666554 3379999999999999988653
No 291
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=57.99 E-value=11 Score=33.00 Aligned_cols=35 Identities=23% Similarity=0.245 Sum_probs=27.2
Q ss_pred HHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcC
Q 020932 144 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 144 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 178 (319)
.-+++.+.+++..+=++.|-|.|+.+|..++...+
T Consensus 89 iGVLkaL~E~gl~p~vIsGTSaGAivAal~as~~~ 123 (421)
T cd07230 89 IGVLKALFEANLLPRIISGSSAGSIVAAILCTHTD 123 (421)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCH
Confidence 35666666666666689999999999999988654
No 292
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=57.15 E-value=55 Score=21.74 Aligned_cols=81 Identities=10% Similarity=0.114 Sum_probs=47.8
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEEEE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAIL 161 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~ 161 (319)
+.+.|||..|........+-....+.|.+.|.....+|..- . .++...+..+... ....|.+=
T Consensus 11 ~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~~-----------~-----~~~~~~l~~~tg~~tvP~vfi~ 74 (97)
T TIGR00365 11 ENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVLE-----------D-----PEIRQGIKEYSNWPTIPQLYVK 74 (97)
T ss_pred cCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECCC-----------C-----HHHHHHHHHHhCCCCCCEEEEC
Confidence 56788998887433332334566677778888777777630 1 1222233322222 34456777
Q ss_pred EEehhHHHHHHHHhhcCC
Q 020932 162 GHSKGGSVVLLYASKYND 179 (319)
Q Consensus 162 G~S~Gg~~a~~~a~~~p~ 179 (319)
|...||.--+..+.+..+
T Consensus 75 g~~iGG~ddl~~l~~~g~ 92 (97)
T TIGR00365 75 GEFVGGCDIIMEMYQSGE 92 (97)
T ss_pred CEEEeChHHHHHHHHCcC
Confidence 888999987776555443
No 293
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=56.74 E-value=14 Score=28.08 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=26.3
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
|.+..+-||...+..-..++..|+.+|++|+.+|+-
T Consensus 1 I~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~D 36 (195)
T PF01656_consen 1 IAVTSGKGGVGKTTIAANLAQALARKGKKVLLIDLD 36 (195)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEES
T ss_pred CEEEcCCCCccHHHHHHHHHhccccccccccccccC
Confidence 345566666664456678999999999999999983
No 294
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=56.69 E-value=18 Score=26.00 Aligned_cols=43 Identities=19% Similarity=0.221 Sum_probs=29.4
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE 128 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~ 128 (319)
++|.+-|.-++.-+.....++..|.++||+|.++=.-+||+..
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~ 43 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFE 43 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcc
Confidence 4677778777665567788999999999998876666666554
No 295
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=56.68 E-value=15 Score=29.07 Aligned_cols=40 Identities=10% Similarity=0.223 Sum_probs=34.2
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
+.|+||++.|+.+.+.......+...|-.+|+.|.++.-|
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p 68 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP 68 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 4689999999988886667788889999999999998876
No 296
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=56.58 E-value=1.1e+02 Score=25.48 Aligned_cols=74 Identities=9% Similarity=0.058 Sum_probs=44.7
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC----CCC--CCCC-----------------CCCCCCChHHHHhH
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF----AGN--GESE-----------------GSFQYGNYWREADD 142 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~----~G~--G~s~-----------------~~~~~~~~~~~~~d 142 (319)
.||++-|-.++.- ..++-.|++++-.++..|- +|. |... .+....+...+.++
T Consensus 5 ~ii~I~GpTasGK----S~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~ 80 (300)
T PRK14729 5 KIVFIFGPTAVGK----SNILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKE 80 (300)
T ss_pred cEEEEECCCccCH----HHHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHH
Confidence 4777888777773 4455566665457888883 333 2111 11223455677888
Q ss_pred HHHHHHHHHhCCCceEEEEEEe
Q 020932 143 LRAVVQYFCGANRAVGAILGHS 164 (319)
Q Consensus 143 ~~~~i~~l~~~~~~~i~l~G~S 164 (319)
...+|+.+..++.-+ +|+|-|
T Consensus 81 a~~~i~~i~~~gk~P-ilvGGT 101 (300)
T PRK14729 81 ALKIIKELRQQKKIP-IFVGGS 101 (300)
T ss_pred HHHHHHHHHHCCCCE-EEEeCc
Confidence 999998887765443 555543
No 297
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=55.75 E-value=94 Score=26.01 Aligned_cols=38 Identities=18% Similarity=0.291 Sum_probs=25.4
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
.+++++|.+.+........+++.|.++|+.|..+...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 34555665433322566788999998999988776544
No 298
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=55.10 E-value=16 Score=29.90 Aligned_cols=29 Identities=21% Similarity=0.094 Sum_probs=21.7
Q ss_pred HHHHhCC-CceEEEEEEehhHHHHHHHHhh
Q 020932 148 QYFCGAN-RAVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 148 ~~l~~~~-~~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
+.+.+.+ ..+-.++|||+|=+.|+.++..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 3444445 7788999999999988876654
No 299
>PRK14974 cell division protein FtsY; Provisional
Probab=55.01 E-value=1.1e+02 Score=25.93 Aligned_cols=68 Identities=19% Similarity=0.286 Sum_probs=41.7
Q ss_pred HHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcC---CccEEE
Q 020932 108 ALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN---DIRTFV 184 (319)
Q Consensus 108 ~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v~~~v 184 (319)
.....|+.++.+|-.|....+ ....+.+..+.+.+ .+..++++.-+.-|.-+...+..+. .+.++|
T Consensus 217 ~~~~~~~DvVLIDTaGr~~~~--------~~lm~eL~~i~~~~---~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giI 285 (336)
T PRK14974 217 HAKARGIDVVLIDTAGRMHTD--------ANLMDELKKIVRVT---KPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVI 285 (336)
T ss_pred HHHhCCCCEEEEECCCccCCc--------HHHHHHHHHHHHhh---CCceEEEeeccccchhHHHHHHHHHhcCCCCEEE
Confidence 334457889999988754422 33345555555544 4556677777777776666665543 277777
Q ss_pred EE
Q 020932 185 NV 186 (319)
Q Consensus 185 ~~ 186 (319)
+-
T Consensus 286 lT 287 (336)
T PRK14974 286 LT 287 (336)
T ss_pred Ee
Confidence 64
No 300
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=54.56 E-value=36 Score=26.70 Aligned_cols=79 Identities=14% Similarity=0.111 Sum_probs=48.8
Q ss_pred HHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCc--eEEEEEEehhHHH----HHHHHhhcC
Q 020932 105 LAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRA--VGAILGHSKGGSV----VLLYASKYN 178 (319)
Q Consensus 105 ~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~--~i~l~G~S~Gg~~----a~~~a~~~p 178 (319)
.++.|...+..|+.+|+-|-...- .+......-++|....++.+...+.+ +=+.+|-+.|+.- |+.+...++
T Consensus 102 ~~eklk~~~vdvvsLDfvgDn~vI--k~vy~l~ksv~dyl~~l~~L~e~~irvvpHitiGL~~gki~~e~kaIdiL~~~~ 179 (275)
T COG1856 102 DLEKLKEELVDVVSLDFVGDNDVI--KRVYKLPKSVEDYLRSLLLLKENGIRVVPHITIGLDFGKIHGEFKAIDILVNYE 179 (275)
T ss_pred HHHHHHHhcCcEEEEeecCChHHH--HHHHcCCccHHHHHHHHHHHHHcCceeceeEEEEeccCcccchHHHHHHHhcCC
Confidence 456777778899999997643221 11122233367778888888776544 3378899999864 566666443
Q ss_pred CccEEEEE
Q 020932 179 DIRTFVNV 186 (319)
Q Consensus 179 ~v~~~v~~ 186 (319)
.+++|+.
T Consensus 180 -~DalVl~ 186 (275)
T COG1856 180 -PDALVLV 186 (275)
T ss_pred -CCeEEEE
Confidence 3444443
No 301
>PRK07933 thymidylate kinase; Validated
Probab=54.12 E-value=32 Score=26.86 Aligned_cols=41 Identities=22% Similarity=0.296 Sum_probs=32.6
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGES 127 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s 127 (319)
+|.+=|.-++.-+.....+.+.|..+|+.|+....|++|.+
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~ 42 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRS 42 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 45667777776556778899999999999999999976643
No 302
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=53.11 E-value=70 Score=29.85 Aligned_cols=65 Identities=17% Similarity=0.194 Sum_probs=41.5
Q ss_pred CceEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHh
Q 020932 83 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCG 152 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~ 152 (319)
-+.+++++||.....-. ..-..+...|..+|..|-..-+|+-|.+-..+ +...+-+..+++|+.+
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~-----~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP-----ENRVKVLKEILDWFKR 615 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc-----hhHHHHHHHHHHHHHH
Confidence 45689999999876632 23467788888889888777776544332221 3335556666666644
No 303
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=52.94 E-value=61 Score=24.01 Aligned_cols=48 Identities=23% Similarity=0.212 Sum_probs=26.9
Q ss_pred HhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEec
Q 020932 140 ADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSG 188 (319)
Q Consensus 140 ~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 188 (319)
.+++.++++.+..+ .++|+++|-|..|..-+.++...++ |+.++=.+|
T Consensus 54 ~~~l~~~L~~~~~~-gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 54 KAELREFLEKLKAE-GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHT-T--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHc-CCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 34455555555554 4679999999999998888887666 777776555
No 304
>KOG0635 consensus Adenosine 5'-phosphosulfate kinase [Inorganic ion transport and metabolism]
Probab=52.93 E-value=42 Score=24.59 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=32.9
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
.+..+|++.|+.++..+.....+.+.|.++|-..+.+|-
T Consensus 29 qkGcviWiTGLSgSGKStlACaL~q~L~qrgkl~Y~LDG 67 (207)
T KOG0635|consen 29 QKGCVIWITGLSGSGKSTLACALSQALLQRGKLTYILDG 67 (207)
T ss_pred CCCcEEEEeccCCCCchhHHHHHHHHHHhcCceEEEecC
Confidence 567899999999988766778888999999988888874
No 305
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=52.44 E-value=17 Score=31.37 Aligned_cols=36 Identities=17% Similarity=0.159 Sum_probs=28.1
Q ss_pred HHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC
Q 020932 144 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND 179 (319)
Q Consensus 144 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 179 (319)
.-+++.|.+++..+=++.|-|.|+.+|..+|...++
T Consensus 99 ~Gv~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~ 134 (391)
T cd07229 99 LGVVKALWLRGLLPRIITGTATGALIAALVGVHTDE 134 (391)
T ss_pred HHHHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHH
Confidence 356666666677767899999999999999986543
No 306
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=52.42 E-value=68 Score=28.55 Aligned_cols=87 Identities=13% Similarity=0.144 Sum_probs=51.7
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhH
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGG 167 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg 167 (319)
+|--|+|.+.. .....-+++-..+||.|+.+|--|.-... ..+...+..+++. ..++.|+.+|.-+=|
T Consensus 442 lfekGYgkd~a-~vak~AI~~a~~~gfDVvLiDTAGR~~~~--------~~lm~~l~k~~~~---~~pd~i~~vgealvg 509 (587)
T KOG0781|consen 442 LFEKGYGKDAA-GVAKEAIQEARNQGFDVVLIDTAGRMHNN--------APLMTSLAKLIKV---NKPDLILFVGEALVG 509 (587)
T ss_pred HHhhhcCCChH-HHHHHHHHHHHhcCCCEEEEeccccccCC--------hhHHHHHHHHHhc---CCCceEEEehhhhhC
Confidence 34456666653 34455555666779999999987643221 1223334444433 367889999988877
Q ss_pred HHHHHHHhhc---------CC-ccEEEEE
Q 020932 168 SVVLLYASKY---------ND-IRTFVNV 186 (319)
Q Consensus 168 ~~a~~~a~~~---------p~-v~~~v~~ 186 (319)
.=++.-+.++ |. |+++++.
T Consensus 510 ~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 510 NDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred cHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 7665444332 33 7777764
No 307
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=52.26 E-value=25 Score=22.60 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=23.8
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 120 (319)
+++-|.++...+..-..++..|++.|+.|+.+|
T Consensus 2 ~~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 2 IVVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 344455555443456788899999999999998
No 308
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=51.94 E-value=15 Score=32.01 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=27.6
Q ss_pred HHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC
Q 020932 144 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND 179 (319)
Q Consensus 144 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 179 (319)
.-+++.+.+++..+=++.|.|.|+.+|..++...++
T Consensus 83 ~GVlkaL~e~gllp~iI~GtSAGAivaalla~~t~~ 118 (407)
T cd07232 83 FGVVKALLDADLLPNVISGTSGGSLVAALLCTRTDE 118 (407)
T ss_pred HHHHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 356666666666666899999999999999986543
No 309
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=50.71 E-value=24 Score=28.60 Aligned_cols=34 Identities=24% Similarity=0.187 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCceE-EEEEEehhHHHHHHHHhhcC
Q 020932 145 AVVQYFCGANRAVG-AILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 145 ~~i~~l~~~~~~~i-~l~G~S~Gg~~a~~~a~~~p 178 (319)
-+++.+.+.+..++ .+.|.|.|+.++..++....
T Consensus 15 Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 15 GVLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred HHHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCc
Confidence 45555555555434 89999999999999887754
No 310
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=50.30 E-value=1.8e+02 Score=25.69 Aligned_cols=75 Identities=13% Similarity=0.202 Sum_probs=41.9
Q ss_pred HHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHH-HHHHHHhhcCC--c
Q 020932 104 NLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGS-VVLLYASKYND--I 180 (319)
Q Consensus 104 ~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~-~a~~~a~~~p~--v 180 (319)
.+.+.+..+++.++.+|-+|+...+ ....+.+..+++.........++|+=-+..+. -...++..+.. +
T Consensus 290 ~l~~~l~~~~~D~VLIDTaGr~~rd--------~~~l~eL~~~~~~~~~~~~~e~~LVLsAt~~~~~~~~~~~~f~~~~~ 361 (432)
T PRK12724 290 KFKETLARDGSELILIDTAGYSHRN--------LEQLERMQSFYSCFGEKDSVENLLVLSSTSSYHHTLTVLKAYESLNY 361 (432)
T ss_pred HHHHHHHhCCCCEEEEeCCCCCccC--------HHHHHHHHHHHHhhcCCCCCeEEEEEeCCCCHHHHHHHHHHhcCCCC
Confidence 3444555568999999997654221 23455555555544222222355554444444 55555555544 7
Q ss_pred cEEEEE
Q 020932 181 RTFVNV 186 (319)
Q Consensus 181 ~~~v~~ 186 (319)
+++|+-
T Consensus 362 ~glIlT 367 (432)
T PRK12724 362 RRILLT 367 (432)
T ss_pred CEEEEE
Confidence 888874
No 311
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=49.51 E-value=1.5e+02 Score=26.16 Aligned_cols=71 Identities=15% Similarity=0.141 Sum_probs=39.8
Q ss_pred HHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcC---Ccc
Q 020932 105 LAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN---DIR 181 (319)
Q Consensus 105 ~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~v~ 181 (319)
..+.+...+|.++.+|.+|....+ +...+.+..+.+.+ .+..+++|--++-|.-+...|..+. .+.
T Consensus 174 al~~~~~~~~DvVIIDTaGr~~~d--------~~l~~eL~~i~~~~---~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~ 242 (428)
T TIGR00959 174 ALEYAKENGFDVVIVDTAGRLQID--------EELMEELAAIKEIL---NPDEILLVVDAMTGQDAVNTAKTFNERLGLT 242 (428)
T ss_pred HHHHHHhcCCCEEEEeCCCccccC--------HHHHHHHHHHHHhh---CCceEEEEEeccchHHHHHHHHHHHhhCCCC
Confidence 344455678999999999864321 22344444444433 3444566655555555555555443 266
Q ss_pred EEEEE
Q 020932 182 TFVNV 186 (319)
Q Consensus 182 ~~v~~ 186 (319)
++|+-
T Consensus 243 giIlT 247 (428)
T TIGR00959 243 GVVLT 247 (428)
T ss_pred EEEEe
Confidence 66654
No 312
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=49.24 E-value=1.5e+02 Score=25.03 Aligned_cols=85 Identities=15% Similarity=0.144 Sum_probs=53.4
Q ss_pred CCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC---CCceEEEEEEehhHHH
Q 020932 93 FRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NRAVGAILGHSKGGSV 169 (319)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l~G~S~Gg~~ 169 (319)
.|+++.. ....-.+.-..+||.|+.+|--|.=... ..+.+.+..+.+-+... .+..+.++--+.-|.-
T Consensus 202 ~G~DpAa-VafDAi~~Akar~~DvvliDTAGRLhnk--------~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqn 272 (340)
T COG0552 202 EGADPAA-VAFDAIQAAKARGIDVVLIDTAGRLHNK--------KNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQN 272 (340)
T ss_pred CCCCcHH-HHHHHHHHHHHcCCCEEEEeCcccccCc--------hhHHHHHHHHHHHhccccCCCCceEEEEEEcccChh
Confidence 5555543 3333445555668999999987632221 23344454444444332 3445778879999999
Q ss_pred HHHHHhhcCC---ccEEEEE
Q 020932 170 VLLYASKYND---IRTFVNV 186 (319)
Q Consensus 170 a~~~a~~~p~---v~~~v~~ 186 (319)
++.-|..+.+ +.++|+-
T Consensus 273 al~QAk~F~eav~l~GiIlT 292 (340)
T COG0552 273 ALSQAKIFNEAVGLDGIILT 292 (340)
T ss_pred HHHHHHHHHHhcCCceEEEE
Confidence 9998888866 8888875
No 313
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=49.05 E-value=8.2 Score=30.50 Aligned_cols=40 Identities=15% Similarity=0.295 Sum_probs=30.2
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
+.|+||++.|+.+++.......+...|-.+|+.|.++.-|
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 3579999999999885555677777788889999999876
No 314
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=49.04 E-value=64 Score=24.22 Aligned_cols=79 Identities=10% Similarity=-0.016 Sum_probs=41.2
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC--CCCChHHHHhHHHHHHHHHHhCCCceEEEEEEe
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF--QYGNYWREADDLRAVVQYFCGANRAVGAILGHS 164 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 164 (319)
-|++.|.|.+. .....+...|..-|..+...+-.......... -..++.....++.++++.+++++. +++++--+
T Consensus 32 ~I~i~G~G~S~--~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~Dv~I~iS~sG~t~~~i~~~~~ak~~g~-~ii~IT~~ 108 (179)
T TIGR03127 32 RIFVAGAGRSG--LVGKAFAMRLMHLGFNVYVVGETTTPSIKKGDLLIAISGSGETESLVTVAKKAKEIGA-TVAAITTN 108 (179)
T ss_pred EEEEEecCHHH--HHHHHHHHHHHhCCCeEEEeCCcccCCCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCC-eEEEEECC
Confidence 47778888766 45677777888888888877432211110000 001222334566666666655543 34444333
Q ss_pred hhHH
Q 020932 165 KGGS 168 (319)
Q Consensus 165 ~Gg~ 168 (319)
.++.
T Consensus 109 ~~s~ 112 (179)
T TIGR03127 109 PEST 112 (179)
T ss_pred CCCc
Confidence 3333
No 315
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=48.76 E-value=24 Score=27.46 Aligned_cols=36 Identities=14% Similarity=0.208 Sum_probs=30.1
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
++|++.|+.+++...+.+.+++.|.+++++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 478889999998776778999999999998887654
No 316
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=48.61 E-value=19 Score=29.97 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=25.9
Q ss_pred HHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhc
Q 020932 144 RAVVQYFCGANRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 144 ~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
.-+++.+.+.+..+-++.|-|.|+.+|..++...
T Consensus 84 ~GVlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 84 VGVVRTLVEHQLLPRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 3455666666666668999999999999988754
No 317
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=48.12 E-value=31 Score=27.60 Aligned_cols=33 Identities=18% Similarity=0.114 Sum_probs=23.4
Q ss_pred HHHHHHhCCCc--e--EEEEEEehhHHHHHHHHhhcC
Q 020932 146 VVQYFCGANRA--V--GAILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 146 ~i~~l~~~~~~--~--i~l~G~S~Gg~~a~~~a~~~p 178 (319)
+++.|.+.+.. + -.+.|-|.|+.+|..++...+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCC
Confidence 44555555543 1 289999999999999888653
No 318
>PRK10867 signal recognition particle protein; Provisional
Probab=48.12 E-value=2e+02 Score=25.53 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=38.0
Q ss_pred HHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC---ccE
Q 020932 106 AVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND---IRT 182 (319)
Q Consensus 106 ~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~ 182 (319)
.+.....+|.++.+|-+|....+ +...+.+..+.+.+ .+..++++--++-|.-+...+..+.+ +.+
T Consensus 176 ~~~a~~~~~DvVIIDTaGrl~~d--------~~lm~eL~~i~~~v---~p~evllVlda~~gq~av~~a~~F~~~~~i~g 244 (433)
T PRK10867 176 LEEAKENGYDVVIVDTAGRLHID--------EELMDELKAIKAAV---NPDEILLVVDAMTGQDAVNTAKAFNEALGLTG 244 (433)
T ss_pred HHHHHhcCCCEEEEeCCCCcccC--------HHHHHHHHHHHHhh---CCCeEEEEEecccHHHHHHHHHHHHhhCCCCE
Confidence 33445568999999999864321 22334444444433 34445555555555555555554432 566
Q ss_pred EEE
Q 020932 183 FVN 185 (319)
Q Consensus 183 ~v~ 185 (319)
+|+
T Consensus 245 iIl 247 (433)
T PRK10867 245 VIL 247 (433)
T ss_pred EEE
Confidence 665
No 319
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=46.98 E-value=41 Score=26.30 Aligned_cols=37 Identities=22% Similarity=0.117 Sum_probs=27.9
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
+.+.+|++-|..... .-..++..|+++||.|++-..+
T Consensus 5 ~~~k~VlItgcs~GG---IG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGG---IGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred cCCCeEEEeecCCcc---hhHHHHHHHHhCCeEEEEEccc
Confidence 456677777766555 3578999999999999987654
No 320
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=46.82 E-value=1.2e+02 Score=25.66 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=24.8
Q ss_pred HHHHHHHHHhCC-CceEEEEEEehhHHH--------HHHHHhhcCCccEEEEE
Q 020932 143 LRAVVQYFCGAN-RAVGAILGHSKGGSV--------VLLYASKYNDIRTFVNV 186 (319)
Q Consensus 143 ~~~~i~~l~~~~-~~~i~l~G~S~Gg~~--------a~~~a~~~p~v~~~v~~ 186 (319)
+..+++.+.... ..+++|+=|++=|.. ++..++..|.|.-+..+
T Consensus 123 ~~~i~~~l~~~~~~~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~I~lIASi 175 (326)
T PF04084_consen 123 LDFIISYLESRPSPPPLYLVIHNIDGPSLRNEKAQSLLAQLASIPNIHLIASI 175 (326)
T ss_pred HHHHHHHHhccCCCCceEEEEECCCChhhcChHHHHHHHHHHcCCCeEEEEec
Confidence 334444444443 668999999987765 23333444555444443
No 321
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=46.59 E-value=83 Score=20.70 Aligned_cols=60 Identities=13% Similarity=0.133 Sum_probs=32.7
Q ss_pred EEEEEccCCCC-CCChhHHHHHHHHHHcC--ceEE-EEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEE
Q 020932 86 IVVLCHGFRST-KDDPSMVNLAVALQNEG--ISAF-RFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 161 (319)
Q Consensus 86 ~vv~~hG~~~~-~~~~~~~~~~~~l~~~G--~~v~-~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 161 (319)
.|+.-||.... ........+++.+.++. +.|. ++-.. ...++.++++.+...+.++|+++
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~~~~~~~v~~a~~~~----------------~~P~i~~~l~~l~~~g~~~vvvv 65 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAESLPDFPYYVGFQSG----------------LGPDTEEAIRELAEEGYQRVVIV 65 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHHCCCCCEEEEEECC----------------CCCCHHHHHHHHHHcCCCeEEEE
Confidence 46777998875 32234566777776652 2221 11111 01235566777766677777665
No 322
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=46.36 E-value=1.2e+02 Score=26.25 Aligned_cols=71 Identities=8% Similarity=0.080 Sum_probs=40.6
Q ss_pred HHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC---cc
Q 020932 105 LAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND---IR 181 (319)
Q Consensus 105 ~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~ 181 (319)
=.+.+.+.+|.++.+|--|.-.- . ..+.+.+.++.+.+ .++.+++|=-+.=|..|...|..+.+ |.
T Consensus 175 gv~~fKke~fdvIIvDTSGRh~q-----e---~sLfeEM~~v~~ai---~Pd~vi~VmDasiGQaae~Qa~aFk~~vdvg 243 (483)
T KOG0780|consen 175 GVDRFKKENFDVIIVDTSGRHKQ-----E---ASLFEEMKQVSKAI---KPDEIIFVMDASIGQAAEAQARAFKETVDVG 243 (483)
T ss_pred HHHHHHhcCCcEEEEeCCCchhh-----h---HHHHHHHHHHHhhc---CCCeEEEEEeccccHhHHHHHHHHHHhhccc
Confidence 35667788999999998653211 1 33345555555555 56666655444444444444554443 66
Q ss_pred EEEEE
Q 020932 182 TFVNV 186 (319)
Q Consensus 182 ~~v~~ 186 (319)
++|+-
T Consensus 244 ~vIlT 248 (483)
T KOG0780|consen 244 AVILT 248 (483)
T ss_pred eEEEE
Confidence 66653
No 323
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=46.17 E-value=33 Score=28.05 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=30.4
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE 126 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 126 (319)
+|.+. |=||..-+..-..++..|+..|++|+.+|+--.|.
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n 42 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKAD 42 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCccc
Confidence 45555 77777755556889999999999999999865544
No 324
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=46.14 E-value=91 Score=21.04 Aligned_cols=60 Identities=20% Similarity=0.241 Sum_probs=34.4
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCc-eEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEE
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGI-SAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 161 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 161 (319)
..|++-||.-.... ..+..+...+.+++. .|..--+ + . .-++.++++.+..++.++|.++
T Consensus 2 ~illvgHGSr~~~~-~~~~~l~~~l~~~~~~~v~~~~l----E--~----------~P~i~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 2 AVVFMGHGTDHPSN-AVYAALEYVLREEDPANVFVGTV----E--G----------YPGLDDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred eEEEEECCCCchhh-hHHHHHHHHHHhcCCCcEEEEEE----c--C----------CCCHHHHHHHHHHcCCCEEEEE
Confidence 35667799887653 467888888876542 2221111 1 0 1224556666666677777665
No 325
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=45.78 E-value=31 Score=28.55 Aligned_cols=34 Identities=24% Similarity=0.269 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcC
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 178 (319)
-+++.+.+.+..+-.+.|.|.|+.+|..++....
T Consensus 86 Gvl~aL~e~~l~~~~i~GtSaGAi~aa~~~~~~~ 119 (298)
T cd07206 86 GVVKALWEQDLLPRVISGSSAGAIVAALLGTHTD 119 (298)
T ss_pred HHHHHHHHcCCCCCEEEEEcHHHHHHHHHHcCCc
Confidence 4445555555555589999999999999887643
No 326
>PLN02748 tRNA dimethylallyltransferase
Probab=45.67 E-value=1.5e+02 Score=26.56 Aligned_cols=77 Identities=17% Similarity=0.108 Sum_probs=46.3
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcC----CCC--CCCC-----------------CCCCCCChHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDF----AGN--GESE-----------------GSFQYGNYWR 138 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~----~G~--G~s~-----------------~~~~~~~~~~ 138 (319)
+++.+|++-|-.++.- ..++..|+.+ +..++..|- +|. |... .+...++...
T Consensus 20 ~~~~~i~i~GptgsGK----s~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~ 95 (468)
T PLN02748 20 GKAKVVVVMGPTGSGK----SKLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKD 95 (468)
T ss_pred CCCCEEEEECCCCCCH----HHHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHH
Confidence 4556778888777763 4455666655 556888772 332 1111 1123356677
Q ss_pred HHhHHHHHHHHHHhCCCceEEEEEEe
Q 020932 139 EADDLRAVVQYFCGANRAVGAILGHS 164 (319)
Q Consensus 139 ~~~d~~~~i~~l~~~~~~~i~l~G~S 164 (319)
+..+...+|+.+..++.-+ +|+|-|
T Consensus 96 F~~~A~~~I~~I~~rgk~P-IlVGGT 120 (468)
T PLN02748 96 FRDHAVPLIEEILSRNGLP-VIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHHhcCCCe-EEEcCh
Confidence 7888999999887775443 555443
No 327
>PRK00889 adenylylsulfate kinase; Provisional
Probab=45.55 E-value=46 Score=24.83 Aligned_cols=38 Identities=18% Similarity=0.180 Sum_probs=28.7
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
++.++.+.|..++..+.....++..|...|..+..+|.
T Consensus 3 ~g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 3 RGVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 34588888998888655667788888777888877764
No 328
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=45.34 E-value=88 Score=23.24 Aligned_cols=41 Identities=12% Similarity=0.183 Sum_probs=34.6
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 125 (319)
+.|+-+-|+-++........+++.|..+||+|.++-.-+|+
T Consensus 2 ~~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 2 MKILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred CcEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 35677778877776567889999999999999999999998
No 329
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=44.92 E-value=60 Score=26.15 Aligned_cols=39 Identities=10% Similarity=0.101 Sum_probs=26.4
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCce-EEEEcCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGIS-AFRFDFA 122 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~-v~~~d~~ 122 (319)
+.+.|++++-.+.... .....+.+.|.+.|+. |-.++.+
T Consensus 27 ~~~rI~~iptAS~~~~-~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 27 EDAIIVIITSASEEPR-EVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCceEEEEeCCCCChH-HHHHHHHHHHHHcCCceeEEEecC
Confidence 5577888886655433 3456777888888984 6666664
No 330
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=44.75 E-value=31 Score=27.70 Aligned_cols=31 Identities=13% Similarity=0.133 Sum_probs=22.2
Q ss_pred HHHHHHHhCCCc---eE-EEEEEehhHHHHHHHHh
Q 020932 145 AVVQYFCGANRA---VG-AILGHSKGGSVVLLYAS 175 (319)
Q Consensus 145 ~~i~~l~~~~~~---~i-~l~G~S~Gg~~a~~~a~ 175 (319)
-+++.|.+++.. ++ .+.|-|.|+.+|..++.
T Consensus 16 GVl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 16 GAAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHcCchhhccCCEEEEECHHHHHHHHHhc
Confidence 345555555543 34 79999999999999884
No 331
>PLN02840 tRNA dimethylallyltransferase
Probab=44.66 E-value=1.7e+02 Score=25.83 Aligned_cols=76 Identities=20% Similarity=0.148 Sum_probs=43.7
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCC----CC--CCCC-----------------CCCCCCChHH
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFA----GN--GESE-----------------GSFQYGNYWR 138 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~----G~--G~s~-----------------~~~~~~~~~~ 138 (319)
.+..+|++-|-.++.- ..++..|+++ +..++..|-. |. |... .+....+...
T Consensus 19 ~~~~vi~I~GptgsGK----Ttla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~ 94 (421)
T PLN02840 19 KKEKVIVISGPTGAGK----SRLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGA 94 (421)
T ss_pred cCCeEEEEECCCCCCH----HHHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHH
Confidence 3445777777777663 4455555554 4457777742 22 1111 1112345567
Q ss_pred HHhHHHHHHHHHHhCCCceEEEEEE
Q 020932 139 EADDLRAVVQYFCGANRAVGAILGH 163 (319)
Q Consensus 139 ~~~d~~~~i~~l~~~~~~~i~l~G~ 163 (319)
+.+++..+|+.+..++.-+ +|+|-
T Consensus 95 F~~~A~~~I~~i~~rgkiP-IvVGG 118 (421)
T PLN02840 95 FFDDARRATQDILNRGRVP-IVAGG 118 (421)
T ss_pred HHHHHHHHHHHHHhcCCCE-EEEcC
Confidence 7889999999887776544 44443
No 332
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=44.28 E-value=45 Score=22.81 Aligned_cols=31 Identities=23% Similarity=0.317 Sum_probs=24.4
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDF 121 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~ 121 (319)
||++.|..++. -..+++.|+++ |+.++..|-
T Consensus 1 vI~I~G~~gsG----KST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSG----KSTLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSS----HHHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCC----HHHHHHHHHHHHCCeEEEecc
Confidence 68889998888 34567777776 899998887
No 333
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=44.06 E-value=37 Score=27.35 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=23.0
Q ss_pred HHHHHHHhCCCc----eEEEEEEehhHHHHHHHHhhcC
Q 020932 145 AVVQYFCGANRA----VGAILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 145 ~~i~~l~~~~~~----~i~l~G~S~Gg~~a~~~a~~~p 178 (319)
-+++.+.++++. .-.+.|-|.|+..+..++...+
T Consensus 21 GVl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 21 GVASCLLEHAPFLVANARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred HHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHcCCC
Confidence 344555444432 2468899999999999887653
No 334
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=43.69 E-value=34 Score=27.00 Aligned_cols=36 Identities=14% Similarity=0.288 Sum_probs=26.2
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 120 (319)
...||++|....... .....+++.|.++||.++.++
T Consensus 186 ~g~IiLlHd~~~~t~-~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNA-EALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHH-HHHHHHHHHHHHCCCEEEEhH
Confidence 346899997533221 357889999999999998775
No 335
>CHL00175 minD septum-site determining protein; Validated
Probab=43.64 E-value=52 Score=26.89 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=31.2
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
...|.+..|-|+...+..-..++..|++.|++|+.+|+-
T Consensus 15 ~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 15 SRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred ceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 457777777787776556688899999999999999874
No 336
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=43.27 E-value=2e+02 Score=24.28 Aligned_cols=42 Identities=24% Similarity=0.312 Sum_probs=27.9
Q ss_pred EEEEEcc--CCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC
Q 020932 86 IVVLCHG--FRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE 128 (319)
Q Consensus 86 ~vv~~hG--~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~ 128 (319)
+||.+-. .|++........+++.|.++|++|.++. ||+|...
T Consensus 50 pvIsVGNi~vGGtGKTP~v~~L~~~l~~~g~~~~ils-RGYg~~~ 93 (325)
T PRK00652 50 PVIVVGNITVGGTGKTPVVIALAEQLQARGLKPGVVS-RGYGGKL 93 (325)
T ss_pred CEEEEcCeeCCCCChHHHHHHHHHHHHHCCCeEEEEC-CCCCCCc
Confidence 3555532 2344433567888899999999877665 8888754
No 337
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=42.96 E-value=38 Score=24.83 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=21.1
Q ss_pred HHHHHHHhCCC--ceEEEEEEehhHHHHHHHH
Q 020932 145 AVVQYFCGANR--AVGAILGHSKGGSVVLLYA 174 (319)
Q Consensus 145 ~~i~~l~~~~~--~~i~l~G~S~Gg~~a~~~a 174 (319)
-+++.+.+++. .--.+.|.|.|+.++..++
T Consensus 15 gvl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 15 GVLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 34444544444 3347889999999999988
No 338
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=42.82 E-value=43 Score=26.32 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=24.2
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
.+.=|+++|.|-+.+ +..|+++||.|+.+|+-
T Consensus 37 ~~~rvLvPgCG~g~D-------~~~La~~G~~VvGvDls 68 (218)
T PF05724_consen 37 PGGRVLVPGCGKGYD-------MLWLAEQGHDVVGVDLS 68 (218)
T ss_dssp TSEEEEETTTTTSCH-------HHHHHHTTEEEEEEES-
T ss_pred CCCeEEEeCCCChHH-------HHHHHHCCCeEEEEecC
Confidence 334578888888762 46788899999999983
No 339
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=42.70 E-value=1.9e+02 Score=23.71 Aligned_cols=71 Identities=11% Similarity=0.128 Sum_probs=43.3
Q ss_pred HHHHHHH-cCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEE-EEEehhHHHHHHHHhhcCC--c
Q 020932 105 LAVALQN-EGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAI-LGHSKGGSVVLLYASKYND--I 180 (319)
Q Consensus 105 ~~~~l~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l-~G~S~Gg~~a~~~a~~~p~--v 180 (319)
..+.+.+ .++.++.+|.+|....+ ....+.+.++++.. .+..+++ +.-++++.-+...+..+.. +
T Consensus 145 ~l~~l~~~~~~D~ViIDt~Gr~~~~--------~~~l~el~~~~~~~---~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~ 213 (270)
T PRK06731 145 ALTYFKEEARVDYILIDTAGKNYRA--------SETVEEMIETMGQV---EPDYICLTLSASMKSKDMIEIITNFKDIHI 213 (270)
T ss_pred HHHHHHhcCCCCEEEEECCCCCcCC--------HHHHHHHHHHHhhh---CCCeEEEEEcCccCHHHHHHHHHHhCCCCC
Confidence 3344444 36899999999864322 23344455555433 3444554 4456778777777777755 8
Q ss_pred cEEEEE
Q 020932 181 RTFVNV 186 (319)
Q Consensus 181 ~~~v~~ 186 (319)
+++|+-
T Consensus 214 ~~~I~T 219 (270)
T PRK06731 214 DGIVFT 219 (270)
T ss_pred CEEEEE
Confidence 888874
No 340
>PRK06696 uridine kinase; Validated
Probab=42.57 E-value=57 Score=25.63 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=30.6
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 120 (319)
.++|.||.+.|..++..+..-..+++.|...|..++.+.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 357899999999988866667788888877787777744
No 341
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=42.27 E-value=1.9e+02 Score=23.66 Aligned_cols=71 Identities=14% Similarity=0.160 Sum_probs=39.5
Q ss_pred HHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHH---hCCCceEEEEEEehhHHHHHHHHhhcCC---cc
Q 020932 108 ALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFC---GANRAVGAILGHSKGGSVVLLYASKYND---IR 181 (319)
Q Consensus 108 ~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~---~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~ 181 (319)
.+..+||.++.+|-+|....+ ....+.+..+.+... ......++++--+.-|.-++..+..+-+ +.
T Consensus 149 ~~~~~~~D~ViIDT~G~~~~d--------~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~~~ 220 (272)
T TIGR00064 149 KAKARNIDVVLIDTAGRLQNK--------VNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVGLT 220 (272)
T ss_pred HHHHCCCCEEEEeCCCCCcch--------HHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhCCCC
Confidence 334568999999999876522 333455555555443 1224445555555455544444444332 66
Q ss_pred EEEEE
Q 020932 182 TFVNV 186 (319)
Q Consensus 182 ~~v~~ 186 (319)
++|+-
T Consensus 221 g~IlT 225 (272)
T TIGR00064 221 GIILT 225 (272)
T ss_pred EEEEE
Confidence 76664
No 342
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=42.12 E-value=50 Score=24.49 Aligned_cols=36 Identities=25% Similarity=0.254 Sum_probs=27.1
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
|.+..+-|+...+..-..++..|++.|++|+.+|.-
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D 37 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDAD 37 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCC
Confidence 445555566665456688899999999999999864
No 343
>PRK14340 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=42.05 E-value=1.9e+02 Score=25.77 Aligned_cols=93 Identities=10% Similarity=-0.031 Sum_probs=50.8
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-CCCCCh-HHHHhHHHHHHH---HHHhCCCceEEEEE
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-FQYGNY-WREADDLRAVVQ---YFCGANRAVGAILG 162 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~-~~~~~~-~~~~~d~~~~i~---~l~~~~~~~i~l~G 162 (319)
++++-+|+......-..+...|.+.||.++-- + ...+-- -...++ +...+.+...|. .+++.+++.+++++
T Consensus 9 ~~i~tlGC~~N~~dse~~~~~l~~~G~~~~~~--~--~~ADviiiNTC~v~~~A~~k~~~~i~~~~~~k~~~~~~~ivv~ 84 (445)
T PRK14340 9 FYIHTFGCQMNQADSEIITALLQDEGYVPAAS--E--EDADIVLLNTCAVRENAVERIGHYLQHLKGAKRRRKGLLVGVL 84 (445)
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHCcCEECCC--c--ccCCEEEEEeeeeeccHHHHHHHHHHHHHHHhhcCCCCEEEEe
Confidence 77888888775444567788888889865421 0 001100 001111 111233444433 33334555567777
Q ss_pred EehhHHHHHHHHhhcCCccEEE
Q 020932 163 HSKGGSVVLLYASKYNDIRTFV 184 (319)
Q Consensus 163 ~S~Gg~~a~~~a~~~p~v~~~v 184 (319)
-|+.-...-.++...|+|+.++
T Consensus 85 GC~a~~~~~e~~~~~p~vd~v~ 106 (445)
T PRK14340 85 GCVPQYEREEMFSMFPVIDFLA 106 (445)
T ss_pred CcccccchHHHHhhCCCCcEEE
Confidence 7776666666666678888776
No 344
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=41.88 E-value=42 Score=24.90 Aligned_cols=36 Identities=22% Similarity=0.282 Sum_probs=25.9
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
|.+..+-|+...+..-..++..|+++|++|+.+|.-
T Consensus 2 i~v~~~kgG~GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 2 IVVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred EEEeeCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 344455555554356678899999999999999864
No 345
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=41.78 E-value=24 Score=26.88 Aligned_cols=36 Identities=17% Similarity=0.271 Sum_probs=24.2
Q ss_pred eEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEc
Q 020932 85 EIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d 120 (319)
..||++|........ .....+++.|.++||.++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 358999952221110 245778899999999988764
No 346
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=41.62 E-value=42 Score=26.63 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=30.0
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 125 (319)
.|.+..+-|+...+..-..++..|+..|++|+.+|.-..|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 4556666666665456678899999999999999986544
No 347
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=41.24 E-value=33 Score=27.98 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=26.3
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 120 (319)
..||++|....+. .....+++.|.++||.++.++
T Consensus 231 G~IILmHd~~~T~--~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASST--EGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHH--HHHHHHHHHHHHCCCEEEeHH
Confidence 4688999765444 357888999999999998774
No 348
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=40.64 E-value=1.6e+02 Score=24.67 Aligned_cols=72 Identities=14% Similarity=0.043 Sum_probs=40.2
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCC----C--CCCCCC-----------------CCCCCChHHH
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFA----G--NGESEG-----------------SFQYGNYWRE 139 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~----G--~G~s~~-----------------~~~~~~~~~~ 139 (319)
.+.+|++-|-.++. -..++..|++. +..++..|-. + +|.... .....+...+
T Consensus 3 ~~~~i~i~GptgsG----Kt~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f 78 (307)
T PRK00091 3 KPKVIVIVGPTASG----KTALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADF 78 (307)
T ss_pred CceEEEEECCCCcC----HHHHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHH
Confidence 34678888888777 34566666655 5567777653 1 111110 0112344566
Q ss_pred HhHHHHHHHHHHhCCCceEE
Q 020932 140 ADDLRAVVQYFCGANRAVGA 159 (319)
Q Consensus 140 ~~d~~~~i~~l~~~~~~~i~ 159 (319)
.+++...++.+..++..+|+
T Consensus 79 ~~~a~~~i~~i~~~gk~pIl 98 (307)
T PRK00091 79 QRDALAAIADILARGKLPIL 98 (307)
T ss_pred HHHHHHHHHHHHhCCCCEEE
Confidence 67777888777665544333
No 349
>PRK10824 glutaredoxin-4; Provisional
Probab=40.58 E-value=1.2e+02 Score=20.98 Aligned_cols=80 Identities=16% Similarity=0.102 Sum_probs=47.7
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEEEE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAIL 161 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~ 161 (319)
+.++|||..|........+-....+.|...|.....+|.-. + .++...+...... ...+|++=
T Consensus 14 ~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~-----------d-----~~~~~~l~~~sg~~TVPQIFI~ 77 (115)
T PRK10824 14 ENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ-----------N-----PDIRAELPKYANWPTFPQLWVD 77 (115)
T ss_pred cCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC-----------C-----HHHHHHHHHHhCCCCCCeEEEC
Confidence 57889999986544433334555566666675544455420 1 1233344433222 45678999
Q ss_pred EEehhHHHHHHHHhhcC
Q 020932 162 GHSKGGSVVLLYASKYN 178 (319)
Q Consensus 162 G~S~Gg~~a~~~a~~~p 178 (319)
|...||.--+..+.+..
T Consensus 78 G~~IGG~ddl~~l~~~G 94 (115)
T PRK10824 78 GELVGGCDIVIEMYQRG 94 (115)
T ss_pred CEEEcChHHHHHHHHCC
Confidence 99999997776655543
No 350
>PRK09273 hypothetical protein; Provisional
Probab=40.42 E-value=1.8e+02 Score=22.76 Aligned_cols=79 Identities=9% Similarity=0.064 Sum_probs=41.5
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC
Q 020932 100 PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND 179 (319)
Q Consensus 100 ~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 179 (319)
..+..+.+.|.+.||.|+-+-. + .......+|.+...-+...+ .+...+ ..+++-..|-.+++ .|-++|.
T Consensus 17 ~i~~~L~~~L~~~G~eV~D~G~--~---~~~~~s~dYpd~a~~vA~~V---~~g~~d-~GIliCGTGiG~si-AANK~pG 86 (211)
T PRK09273 17 IIYEALKKVADPKGHEVFNYGM--Y---DEEDHQLTYVQNGIMASILL---NSKAVD-FVVTGCGTGQGAML-ALNSFPG 86 (211)
T ss_pred HHHHHHHHHHHHCCCEEEEeCC--C---CCCCCCCChHHHHHHHHHHH---HcCCCC-EEEEEcCcHHHHHH-HHhcCCC
Confidence 4567888999999998854432 1 11111134444444333333 333233 44444333333322 3557788
Q ss_pred ccEEEEEec
Q 020932 180 IRTFVNVSG 188 (319)
Q Consensus 180 v~~~v~~~~ 188 (319)
|.+..+.++
T Consensus 87 Iraalc~d~ 95 (211)
T PRK09273 87 VVCGYCIDP 95 (211)
T ss_pred eEEEEeCCH
Confidence 888777765
No 351
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=40.24 E-value=97 Score=20.90 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=21.6
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 120 (319)
.+.+.||++.+..... -...+..|...||.|..++
T Consensus 63 ~~~~vvvyc~~g~~~~----s~~~a~~l~~~G~~v~~l~ 97 (110)
T cd01521 63 KEKLFVVYCDGPGCNG----ATKAALKLAELGFPVKEMI 97 (110)
T ss_pred CCCeEEEEECCCCCch----HHHHHHHHHHcCCeEEEec
Confidence 4567777776543221 3456677888899865553
No 352
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=39.51 E-value=57 Score=27.56 Aligned_cols=40 Identities=10% Similarity=0.159 Sum_probs=29.2
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
++..+|.+.|-|+...+..-..++..|+..|++|+.+|.-
T Consensus 29 ~~~~ii~v~gkgG~GKSt~a~nLa~~la~~g~rVllid~D 68 (329)
T cd02033 29 KKTQIIAIYGKGGIGKSFTLANLSYMMAQQGKRVLLIGCD 68 (329)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEee
Confidence 3444555557777775555678899999999999988763
No 353
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=39.50 E-value=39 Score=25.27 Aligned_cols=36 Identities=17% Similarity=0.128 Sum_probs=26.8
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRF 119 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~ 119 (319)
...+.|+++-|-|.+. ..-...++.|..+|+.|.++
T Consensus 23 ~~~~~v~il~G~GnNG--gDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNG--GDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp CTT-EEEEEE-SSHHH--HHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEEECCCCCh--HHHHHHHHHHHHCCCeEEEE
Confidence 3567788888888877 44567889999999998883
No 354
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=39.47 E-value=1e+02 Score=25.03 Aligned_cols=54 Identities=19% Similarity=0.076 Sum_probs=44.4
Q ss_pred HHHHhHHHHHHHHHHhCCCceEEEEEEehhHHH-HHHHHhhcCCccEEEEEeccc
Q 020932 137 WREADDLRAVVQYFCGANRAVGAILGHSKGGSV-VLLYASKYNDIRTFVNVSGRY 190 (319)
Q Consensus 137 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~-a~~~a~~~p~v~~~v~~~~~~ 190 (319)
....+|..++++.....+...+.++|.+....- ++.+|..+|.+-..+.+-|..
T Consensus 13 ~~~~~d~~~vi~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~~v~~~~G~HP~~ 67 (256)
T COG0084 13 EEFDEDRDEVIARAREAGVKKMVVVGTDLEDFKRALELAEKYPNVYAAVGVHPLD 67 (256)
T ss_pred hhhcCCHHHHHHHHHHcCCcEEEEeecCHHHHHHHHHHHHhCCCeEEEEeeCCCc
Confidence 345667788888887778889999999999986 888888999887778787766
No 355
>PRK14331 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=39.38 E-value=2.5e+02 Score=24.85 Aligned_cols=93 Identities=9% Similarity=-0.107 Sum_probs=47.2
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-CCCCCh-HHHHhHHHHHH---HHHHhCCCceEEEEE
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-FQYGNY-WREADDLRAVV---QYFCGANRAVGAILG 162 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~-~~~~~~-~~~~~d~~~~i---~~l~~~~~~~i~l~G 162 (319)
++++-+|+......-..+...|.+.||.+.-- . ...+-- -...++ ......+...| +.+++.+++..+++|
T Consensus 3 ~~i~t~GC~~N~~ds~~~~~~l~~~G~~~~~~--~--~~aDviiiNTC~v~~~a~~k~~~~i~~~~~~k~~~p~~~ivv~ 78 (437)
T PRK14331 3 YYIKTFGCQMNFNDSEKIKGILQTLGYEPADD--W--EEADLILVNTCTIREKPDQKVLSHLGEYKKIKEKNPNALIGVC 78 (437)
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHCcCEECCC--c--ccCCEEEEeCcceecHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 56677777764334466788888889865431 0 011100 001111 22233444444 444444455456666
Q ss_pred EehhHHHHHHHHhhcCCccEEE
Q 020932 163 HSKGGSVVLLYASKYNDIRTFV 184 (319)
Q Consensus 163 ~S~Gg~~a~~~a~~~p~v~~~v 184 (319)
-++.....-.++...|.++.++
T Consensus 79 Gc~a~~~~e~~~~~~p~vD~vv 100 (437)
T PRK14331 79 GCLAQRAGYEIVQKAPFIDIVF 100 (437)
T ss_pred cchhcCChHHHHhcCCCCcEEE
Confidence 5655544444455567676665
No 356
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=39.36 E-value=46 Score=26.84 Aligned_cols=21 Identities=19% Similarity=0.264 Sum_probs=17.7
Q ss_pred EEEEEEehhHHHHHHHHhhcC
Q 020932 158 GAILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 158 i~l~G~S~Gg~~a~~~a~~~p 178 (319)
-.+.|-|.|+.++..++...+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 369999999999999987654
No 357
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=38.78 E-value=1.5e+02 Score=22.23 Aligned_cols=78 Identities=8% Similarity=-0.025 Sum_probs=39.5
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC--CCCChHHHHhHHHHHHHHHHhCCCceEEEEEEeh
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF--QYGNYWREADDLRAVVQYFCGANRAVGAILGHSK 165 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~--~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~ 165 (319)
|++-|.|.+. .....+...|..-|..+..++-.......... -..+......++..+++.+++.+.. ++.+.-+-
T Consensus 36 I~i~G~G~S~--~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~D~vI~iS~sG~t~~~i~~~~~ak~~g~~-iI~IT~~~ 112 (179)
T cd05005 36 IFVYGAGRSG--LVAKAFAMRLMHLGLNVYVVGETTTPAIGPGDLLIAISGSGETSSVVNAAEKAKKAGAK-VVLITSNP 112 (179)
T ss_pred EEEEecChhH--HHHHHHHHHHHhCCCeEEEeCCCCCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHCCCe-EEEEECCC
Confidence 5666777765 45667777787778888876432111000000 0012233345666666666555433 44444334
Q ss_pred hHH
Q 020932 166 GGS 168 (319)
Q Consensus 166 Gg~ 168 (319)
++.
T Consensus 113 ~s~ 115 (179)
T cd05005 113 DSP 115 (179)
T ss_pred CCc
Confidence 443
No 358
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=38.70 E-value=28 Score=27.54 Aligned_cols=29 Identities=14% Similarity=0.256 Sum_probs=21.4
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
=|++.|-|-+.+ +..|+++||.|+.+|+-
T Consensus 46 rvLvPgCGkg~D-------~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID-------MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH-------HHHHHhCCCcEEEEecC
Confidence 456666666542 46788999999999983
No 359
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=38.47 E-value=47 Score=26.67 Aligned_cols=20 Identities=20% Similarity=0.165 Sum_probs=17.2
Q ss_pred EEEEEehhHHHHHHHHhhcC
Q 020932 159 AILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 159 ~l~G~S~Gg~~a~~~a~~~p 178 (319)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999887654
No 360
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=38.33 E-value=56 Score=22.60 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=24.9
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
+.+-|-++...+..-..++..|+++|.+|+++|.
T Consensus 2 i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~ 35 (116)
T cd02034 2 IAITGKGGVGKTTIAALLARYLAEKGKPVLAIDA 35 (116)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEC
Confidence 3455666665445567788889888999999985
No 361
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=37.61 E-value=77 Score=21.00 Aligned_cols=27 Identities=22% Similarity=0.437 Sum_probs=17.4
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHc
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNE 112 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~ 112 (319)
.|++-||......+..+..+++.+.+.
T Consensus 2 ivlv~hGS~~~~~~~~~~~l~~~l~~~ 28 (101)
T cd03416 2 LLLVGHGSRDPRAAEALEALAERLRER 28 (101)
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 466778887653223567777777665
No 362
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=37.52 E-value=53 Score=26.52 Aligned_cols=39 Identities=15% Similarity=0.228 Sum_probs=29.4
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE 126 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 126 (319)
|.+. |=||...+..-..++..|+..|++|+.+|+--.|.
T Consensus 4 iav~-~KGGvGKTT~~~nLA~~La~~G~kVlliD~Dpq~n 42 (270)
T cd02040 4 IAIY-GKGGIGKSTTTQNLSAALAEMGKKVMIVGCDPKAD 42 (270)
T ss_pred EEEE-eCCcCCHHHHHHHHHHHHHhCCCeEEEEEcCCCCC
Confidence 4445 66666654566889999999999999999865543
No 363
>PLN02924 thymidylate kinase
Probab=37.26 E-value=70 Score=25.18 Aligned_cols=41 Identities=17% Similarity=0.306 Sum_probs=32.8
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
..+.+|.+=|..++..+.....+.+.|..+|+.|+....|+
T Consensus 14 ~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~ 54 (220)
T PLN02924 14 SRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPD 54 (220)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCC
Confidence 44567888888888765677889999999999998877765
No 364
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=37.24 E-value=30 Score=28.90 Aligned_cols=19 Identities=32% Similarity=0.340 Sum_probs=16.8
Q ss_pred EEEEEehhHHHHHHHHhhc
Q 020932 159 AILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 159 ~l~G~S~Gg~~a~~~a~~~ 177 (319)
.+.|.|.||.+|+.++...
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6889999999999998754
No 365
>COG0218 Predicted GTPase [General function prediction only]
Probab=37.22 E-value=93 Score=24.05 Aligned_cols=56 Identities=14% Similarity=0.258 Sum_probs=31.8
Q ss_pred CCcEEEEecCCCCccCcchH---HHHHhhC---CCCe--EEEecCCCccCcccHHHHHHHHHHHHHh
Q 020932 250 ECSVLTIHGSSDKIIPLQDA---HEFDKII---PNHK--LHVVEGANHGYTNHQAELVSVVLDFVKA 308 (319)
Q Consensus 250 ~~P~l~i~g~~D~~~~~~~~---~~~~~~~---~~~~--~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 308 (319)
..|++++.-.-|.+-..+.. ....+.+ +... +..++-....- -+++...|.+|+..
T Consensus 135 ~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G---i~~l~~~i~~~~~~ 198 (200)
T COG0218 135 GIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG---IDELKAKILEWLKE 198 (200)
T ss_pred CCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC---HHHHHHHHHHHhhc
Confidence 78999999999998754443 2233222 2222 33333222211 36677777777754
No 366
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=37.08 E-value=96 Score=25.50 Aligned_cols=30 Identities=13% Similarity=0.321 Sum_probs=23.4
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
-|.|+|..|.++ ..+.|+..||+|+.+|+-
T Consensus 252 vPmi~fakG~g~---------~Le~l~~tG~DVvgLDWT 281 (359)
T KOG2872|consen 252 VPMILFAKGSGG---------ALEELAQTGYDVVGLDWT 281 (359)
T ss_pred CceEEEEcCcch---------HHHHHHhcCCcEEeeccc
Confidence 377888877655 347788999999999984
No 367
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=37.07 E-value=60 Score=23.86 Aligned_cols=38 Identities=13% Similarity=0.160 Sum_probs=28.0
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 125 (319)
+.+-|..++..+.....++..|..+|++|..+..-+++
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 45557666664456688888898889999999876554
No 368
>PRK14337 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=37.03 E-value=2.5e+02 Score=24.97 Aligned_cols=94 Identities=13% Similarity=0.053 Sum_probs=50.8
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC-CCCCh-HHHHhHHHHHHHHH---HhCCCceEEEEE
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNY-WREADDLRAVVQYF---CGANRAVGAILG 162 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~-~~~~~d~~~~i~~l---~~~~~~~i~l~G 162 (319)
++++-+|+......-..+...|.+.||.+... ...+--- ...++ ....+.....|..+ +..+++..+++|
T Consensus 6 ~~i~tlGC~~N~~dse~~~~~l~~~G~~~~~~-----~~ADiiiiNTC~v~~~A~~~~~~~i~~~~~~k~~~p~~~ivv~ 80 (446)
T PRK14337 6 FHIITFGCQMNVNDSDWLARALVARGFTEAPE-----EEARVFIVNTCSVRDKPEQKVYSLLGRIRHATKKNPDVFVAVG 80 (446)
T ss_pred EEEEeeCCCCcHHHHHHHHHHHHHCCCEECCc-----CCCCEEEEeccCeecHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 56777777774445577888899999976431 1111000 11111 22233444444333 433444456777
Q ss_pred EehhHHHHHHHHhhcCCccEEEEE
Q 020932 163 HSKGGSVVLLYASKYNDIRTFVNV 186 (319)
Q Consensus 163 ~S~Gg~~a~~~a~~~p~v~~~v~~ 186 (319)
-++-....-.+....|+|+.++.-
T Consensus 81 GC~a~~~~~~~~~~~p~vd~vv~~ 104 (446)
T PRK14337 81 GCVAQQIGSGFFSRFPQVRLVFGT 104 (446)
T ss_pred CCccccccHHHHhhCCCCcEEECC
Confidence 677555555555567778766643
No 369
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=36.97 E-value=2.6e+02 Score=23.75 Aligned_cols=38 Identities=11% Similarity=0.195 Sum_probs=24.1
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFAG 123 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G 123 (319)
.+++=+|+||.|.... ...+.++|.++ +..|+..|.-+
T Consensus 210 ~g~vDi~V~gaGTGGT---itgvGRylke~~~~~kVv~vdp~~ 249 (362)
T KOG1252|consen 210 DGKVDIFVAGAGTGGT---ITGVGRYLKEQNPNIKVVGVDPQE 249 (362)
T ss_pred cCCCCEEEeccCCCce---eechhHHHHHhCCCCEEEEeCCCc
Confidence 4556678888776653 34455666555 46788888654
No 370
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=36.65 E-value=1.3e+02 Score=21.45 Aligned_cols=37 Identities=16% Similarity=0.063 Sum_probs=23.4
Q ss_pred CceEEEEEccCCCCCC-----------ChhH-----------HHHHHHHHHcCceEEEE
Q 020932 83 SSEIVVLCHGFRSTKD-----------DPSM-----------VNLAVALQNEGISAFRF 119 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~-----------~~~~-----------~~~~~~l~~~G~~v~~~ 119 (319)
...++||+||-.-+.. .-+| ...+..|.+.|++|+++
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 4568999999643221 1233 23456788899998764
No 371
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=36.50 E-value=1.3e+02 Score=22.90 Aligned_cols=25 Identities=12% Similarity=-0.001 Sum_probs=13.4
Q ss_pred HHHHhHHHHHHHHHHhCCC-ceEEEE
Q 020932 137 WREADDLRAVVQYFCGANR-AVGAIL 161 (319)
Q Consensus 137 ~~~~~d~~~~i~~l~~~~~-~~i~l~ 161 (319)
+...+-+..+++.+++..+ .+|+++
T Consensus 74 ~~~~~~~~~fv~~iR~~hP~tPIllv 99 (178)
T PF14606_consen 74 EEFRERLDGFVKTIREAHPDTPILLV 99 (178)
T ss_dssp TTHHHHHHHHHHHHHTT-SSS-EEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 4445666677777766633 344444
No 372
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=36.49 E-value=73 Score=24.46 Aligned_cols=38 Identities=16% Similarity=0.238 Sum_probs=27.4
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
..|.+..+-++...+..-..++..|+..|++|+.+|.-
T Consensus 18 kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 18 KVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34555555555554456688999999999999999874
No 373
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=36.40 E-value=69 Score=25.62 Aligned_cols=38 Identities=21% Similarity=0.248 Sum_probs=28.4
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
.|.+..+-|+...+..-..++..|++.|++|+.+|.--
T Consensus 3 ii~v~s~kGGvGKTt~a~~lA~~la~~g~~vlliD~D~ 40 (261)
T TIGR01968 3 VIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADI 40 (261)
T ss_pred EEEEecCCCCccHHHHHHHHHHHHHHcCCeEEEEECCC
Confidence 45555666666654566788999999999999999853
No 374
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=36.39 E-value=52 Score=26.62 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=26.4
Q ss_pred cCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 020932 92 GFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 92 G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 125 (319)
|=||...+..-..++..|+.+|++|+.+|+--.|
T Consensus 7 gKGGvGKTT~a~nLA~~la~~G~rvlliD~Dpq~ 40 (267)
T cd02032 7 GKGGIGKSTTSSNLSVALAKRGKKVLQIGCDPKH 40 (267)
T ss_pred cCCCCCHHHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 6666665455688999999999999999985433
No 375
>TIGR01969 minD_arch cell division ATPase MinD, archaeal. This model represents the archaeal branch of the MinD family. MinD, a weak ATPase, works in bacteria with MinC as a generalized cell division inhibitor and, through interaction with MinE, prevents septum placement inappropriate sites. Often several members of this family are found in archaeal genomes, and the function is uncharacterized. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. The exact roles of the various archaeal MinD homologs are unknown.
Probab=36.39 E-value=66 Score=25.58 Aligned_cols=38 Identities=26% Similarity=0.302 Sum_probs=27.7
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
+|.++.+=||...+..-..++..|+..|++|+.+|+--
T Consensus 2 ii~v~~~KGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 39 (251)
T TIGR01969 2 IITIASGKGGTGKTTITANLGVALAKLGKKVLALDADI 39 (251)
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 34555555555544556788999999999999999754
No 376
>TIGR01287 nifH nitrogenase iron protein. This model describes nitrogenase (EC 1.18.6.1) iron protein, also called nitrogenase reductase or nitrogenase component II. This model includes molybdenum-iron nitrogenase reductase (nifH), vanadium-iron nitrogenase reductase (vnfH), and iron-iron nitrogenase reductase (anfH). The model excludes the homologous protein from the light-independent protochlorophyllide reductase.
Probab=35.91 E-value=74 Score=25.90 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=29.1
Q ss_pred EEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC
Q 020932 89 LCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE 126 (319)
Q Consensus 89 ~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 126 (319)
.+-|=||...+..-..++..|+..|++|+.+|+-..|.
T Consensus 4 a~~gKGGVGKTT~a~nLA~~La~~G~~VlliD~D~q~~ 41 (275)
T TIGR01287 4 AIYGKGGIGKSTTTQNIAAALAEMGKKVMIVGCDPKAD 41 (275)
T ss_pred EEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 33477777755567889999999999999999865543
No 377
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=35.75 E-value=2.7e+02 Score=23.48 Aligned_cols=69 Identities=13% Similarity=0.182 Sum_probs=40.3
Q ss_pred HHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHH---hCCCceEEEEEEehhHHHHHHHHhhcCC---ccEE
Q 020932 110 QNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFC---GANRAVGAILGHSKGGSVVLLYASKYND---IRTF 183 (319)
Q Consensus 110 ~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~---~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---v~~~ 183 (319)
..++|.++.+|.+|..... ....+.+..+.+.+. ...+..++++-.+.-|.-++.-+..+-+ +.++
T Consensus 193 ~~~~~D~ViIDTaGr~~~~--------~~l~~eL~~~~~v~~~~~~~~p~~~~LVl~a~~g~~~~~~a~~f~~~~~~~gi 264 (318)
T PRK10416 193 KARGIDVLIIDTAGRLHNK--------TNLMEELKKIKRVIKKADPDAPHEVLLVLDATTGQNALSQAKAFHEAVGLTGI 264 (318)
T ss_pred HhCCCCEEEEeCCCCCcCC--------HHHHHHHHHHHHHHhhhcCCCCceEEEEEECCCChHHHHHHHHHHhhCCCCEE
Confidence 3467999999999865432 233344444444332 2234456777777777766665555432 6666
Q ss_pred EEE
Q 020932 184 VNV 186 (319)
Q Consensus 184 v~~ 186 (319)
|+-
T Consensus 265 IlT 267 (318)
T PRK10416 265 ILT 267 (318)
T ss_pred EEE
Confidence 654
No 378
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=35.63 E-value=45 Score=27.89 Aligned_cols=22 Identities=27% Similarity=0.229 Sum_probs=18.2
Q ss_pred CCceEEEEEEehhHHHHHHHHh
Q 020932 154 NRAVGAILGHSKGGSVVLLYAS 175 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~~a~~~a~ 175 (319)
+..+..+.|||+|=+.|+.++.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 3667799999999999887665
No 379
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=35.60 E-value=49 Score=22.98 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=26.4
Q ss_pred eEEEEE-EehhHHHHHHHHhhcCCccEEEEEecc
Q 020932 157 VGAILG-HSKGGSVVLLYASKYNDIRTFVNVSGR 189 (319)
Q Consensus 157 ~i~l~G-~S~Gg~~a~~~a~~~p~v~~~v~~~~~ 189 (319)
||.|+| ..+.|.-.+.++..+|++.-+.+++..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~ 34 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSS 34 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEEST
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeec
Confidence 588999 889999889988889987766666553
No 380
>PHA02518 ParA-like protein; Provisional
Probab=35.49 E-value=75 Score=24.39 Aligned_cols=39 Identities=18% Similarity=0.241 Sum_probs=27.8
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 125 (319)
|.+...=||...+..-..++..|+..|++|+.+|+--.+
T Consensus 3 i~v~~~KGGvGKTT~a~~la~~la~~g~~vlliD~D~q~ 41 (211)
T PHA02518 3 IAVLNQKGGAGKTTVATNLASWLHADGHKVLLVDLDPQG 41 (211)
T ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 445555555554445678889999999999999985443
No 381
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=35.39 E-value=3e+02 Score=23.88 Aligned_cols=88 Identities=22% Similarity=0.265 Sum_probs=56.8
Q ss_pred CceEEEEEccCCCCCC-----ChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCce
Q 020932 83 SSEIVVLCHGFRSTKD-----DPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAV 157 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~-----~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 157 (319)
+...||++||...+.. ...|..+++.+.++|+ +-.+|.-..|..++ ++..+.-++.++.. +.+
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF~~G------leeDa~~lR~~a~~----~~~- 237 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGFADG------LEEDAYALRLFAEV----GPE- 237 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhhccc------hHHHHHHHHHHHHh----CCc-
Confidence 4457999999876653 2679999999999975 55677665554433 23334444444442 222
Q ss_pred EEEEEEehhHHHHHHHHhhcCC-ccEEEEEec
Q 020932 158 GAILGHSKGGSVVLLYASKYND-IRTFVNVSG 188 (319)
Q Consensus 158 i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 188 (319)
.++..|+.=..++. .+ |.++.+++.
T Consensus 238 -~lva~S~SKnfgLY-----gERVGa~~vva~ 263 (396)
T COG1448 238 -LLVASSFSKNFGLY-----GERVGALSVVAE 263 (396)
T ss_pred -EEEEehhhhhhhhh-----hhccceeEEEeC
Confidence 78888876665543 44 888888865
No 382
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=35.22 E-value=49 Score=22.90 Aligned_cols=22 Identities=18% Similarity=0.344 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHcCceEEEEcCC
Q 020932 101 SMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 101 ~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
.+..+++.|+++|+.|++.|.-
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 4678999999999999999974
No 383
>PRK03846 adenylylsulfate kinase; Provisional
Probab=35.22 E-value=71 Score=24.50 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=27.0
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 120 (319)
.+|.+|.+.|..++..+.....+...|...|+.++.+|
T Consensus 22 ~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 22 HKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 56778888888777754455666677776777777776
No 384
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=35.03 E-value=1e+02 Score=23.83 Aligned_cols=40 Identities=13% Similarity=0.267 Sum_probs=29.1
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHH-cCceEEEEcCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQN-EGISAFRFDFA 122 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~-~G~~v~~~d~~ 122 (319)
..+.|.+.-+-|+...+..-..++..|+. .|++|+.+|.-
T Consensus 34 ~~~vi~v~s~kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 34 NNNLIMVTSSLPGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 34566777666666654556788999986 59999999864
No 385
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=34.62 E-value=23 Score=28.77 Aligned_cols=15 Identities=33% Similarity=0.308 Sum_probs=12.9
Q ss_pred CCceEEEEEEehhHH
Q 020932 154 NRAVGAILGHSKGGS 168 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~ 168 (319)
+...|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 567899999999975
No 386
>PRK13973 thymidylate kinase; Provisional
Probab=34.56 E-value=90 Score=24.30 Aligned_cols=38 Identities=16% Similarity=0.140 Sum_probs=31.4
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
.+|.+=|..++..+.....+.+.|...|+.|+....||
T Consensus 4 ~~IviEG~dGsGKtTq~~~l~~~l~~~g~~~~~~~~p~ 41 (213)
T PRK13973 4 RFITFEGGEGAGKSTQIRLLAERLRAAGYDVLVTREPG 41 (213)
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 46666888777765677889999999999999998887
No 387
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=34.49 E-value=79 Score=23.10 Aligned_cols=21 Identities=14% Similarity=0.300 Sum_probs=15.2
Q ss_pred HHHHHHHHHHcCceEEEEcCC
Q 020932 102 MVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 102 ~~~~~~~l~~~G~~v~~~d~~ 122 (319)
...+.+.|.+.|+.|..+|+.
T Consensus 2 ~~~~~~~f~~~g~~v~~l~~~ 22 (154)
T PF03575_consen 2 VEKFRKAFRKLGFEVDQLDLS 22 (154)
T ss_dssp HHHHHHHHHHCT-EEEECCCT
T ss_pred HHHHHHHHHHCCCEEEEEecc
Confidence 356677888889888888875
No 388
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART). Interestingly, this novel domain also exists as an N-terminal domain of sigma54-dependent transcriptional activators (enhancer-binding proteins). Because sigma54 dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain (see PIRSF003187 from PIRSF, PIRSF005263 from PIRSF, PIRSF003184 from PIRSF, PIRSF005263 from PIRSF, IPR014443 from INTERPRO for details), the proteins of the current entry may be predicted to play a role in signal recognition/receiving and signal transduction.; PDB: 2P10_C.
Probab=34.49 E-value=1.1e+02 Score=24.93 Aligned_cols=82 Identities=18% Similarity=0.211 Sum_probs=43.2
Q ss_pred HHHHHHHHcCceEEEEcCCC-CCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHH-----HHHhhc
Q 020932 104 NLAVALQNEGISAFRFDFAG-NGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVL-----LYASKY 177 (319)
Q Consensus 104 ~~~~~l~~~G~~v~~~d~~G-~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~-----~~a~~~ 177 (319)
..++.+++.|-+++++.+-- .|.+.+.....+.++.++.+.++.+...+.+++ ++++.| ||.++. .+..+.
T Consensus 161 e~A~~M~~AGaDiiv~H~GlT~gG~~Ga~~~~sl~~a~~~~~~i~~aa~~v~~d-ii~l~h--GGPI~~p~D~~~~l~~t 237 (268)
T PF09370_consen 161 EQARAMAEAGADIIVAHMGLTTGGSIGAKTALSLEEAAERIQEIFDAARAVNPD-IIVLCH--GGPIATPEDAQYVLRNT 237 (268)
T ss_dssp HHHHHHHHHT-SEEEEE-SS----------S--HHHHHHHHHHHHHHHHCC-TT--EEEEE--CTTB-SHHHHHHHHHH-
T ss_pred HHHHHHHHcCCCEEEecCCccCCCCcCccccCCHHHHHHHHHHHHHHHHHhCCC-eEEEEe--CCCCCCHHHHHHHHhcC
Confidence 45677788899999988632 233333444557777777788888777665544 666666 787642 333333
Q ss_pred CCccEEEEEec
Q 020932 178 NDIRTFVNVSG 188 (319)
Q Consensus 178 p~v~~~v~~~~ 188 (319)
+++.+.+.-++
T Consensus 238 ~~~~Gf~G~Ss 248 (268)
T PF09370_consen 238 KGIHGFIGASS 248 (268)
T ss_dssp TTEEEEEESTT
T ss_pred CCCCEEecccc
Confidence 44777766554
No 389
>KOG0855 consensus Alkyl hydroperoxide reductase, thiol specific antioxidant and related enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=34.46 E-value=1.5e+02 Score=22.06 Aligned_cols=60 Identities=8% Similarity=0.063 Sum_probs=38.6
Q ss_pred eEEEEEeCCCCceEEEEEEeCCCceEEEEEccCCCCC----CChhHHHHHHHHHHcCceEEEEcC
Q 020932 61 QQELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTK----DDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 61 ~~~~~~~~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~----~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
.-++++...||..+...-+. ++++.|+|+-....+. ...-++.-.+.|...|+.|+.+..
T Consensus 69 iPD~tL~dedg~sisLkkit-~nk~vV~f~YP~asTPGCTkQaCgFRDnY~k~kka~aeV~GlS~ 132 (211)
T KOG0855|consen 69 IPDFTLKDEDGKSISLKKIT-GNKPVVLFFYPAASTPGCTKQACGFRDNYEKFKKAGAEVIGLSG 132 (211)
T ss_pred CCCcccccCCCCeeeeeeec-CCCcEEEEEeccCCCCCcccccccccccHHHHhhcCceEEeecc
Confidence 34556777788877754443 3457888876554333 113456677888888999987753
No 390
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=34.05 E-value=1.6e+02 Score=22.91 Aligned_cols=40 Identities=10% Similarity=0.169 Sum_probs=29.0
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAG 123 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G 123 (319)
..+.|++++-.....+ .+...+.+.|.+. |+.+..++...
T Consensus 30 ~~~~i~~IptAs~~~~-~~~~~~~~a~~~l~G~~~~~~~~~~ 70 (212)
T cd03146 30 ARPKVLFVPTASGDRD-EYTARFYAAFESLRGVEVSHLHLFD 70 (212)
T ss_pred CCCeEEEECCCCCCHH-HHHHHHHHHHhhccCcEEEEEeccC
Confidence 5667888887776443 3456777888888 99988887643
No 391
>COG0489 Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=33.83 E-value=1.1e+02 Score=24.81 Aligned_cols=47 Identities=23% Similarity=0.246 Sum_probs=37.5
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEG 129 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~ 129 (319)
.+..|+..-|-++...+..-..++..++..|++|..+|.-.+|.+..
T Consensus 56 ~~~~I~V~S~kgGvGKStva~nLA~alA~~G~rVlliDaD~~gps~~ 102 (265)
T COG0489 56 VKNVIAVTSGKGGVGKSTVAVNLAAALAQLGKRVLLLDADLRGPSIP 102 (265)
T ss_pred cceEEEEEeCCCCCcHHHHHHHHHHHHHhcCCcEEEEeCcCCCCchH
Confidence 45667777787777755667889999999999999999887776653
No 392
>PRK14325 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=33.82 E-value=2.8e+02 Score=24.61 Aligned_cols=93 Identities=8% Similarity=-0.049 Sum_probs=48.6
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-CCCCCh-HHHHhHHHHH---HHHHHhCCCceEEEEE
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-FQYGNY-WREADDLRAV---VQYFCGANRAVGAILG 162 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~-~~~~~~-~~~~~d~~~~---i~~l~~~~~~~i~l~G 162 (319)
++++-+|+......-..+...|.+.||.++-- .. ..+-- -...++ ....+.+... +..+++..++..+++|
T Consensus 6 ~~i~t~GC~~N~~ds~~~~~~l~~~g~~~~~~-~~---~aDvviinTC~v~~~a~~~~~~~i~~~~~~k~~~p~~~vvvg 81 (444)
T PRK14325 6 LYIKTYGCQMNEYDSSKMADLLGAEGYELTDD-PE---EADLILLNTCSIREKAQEKVFSELGRWRKLKEKNPDLIIGVG 81 (444)
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHHCcCEECCC-cC---CCCEEEEEcceeeehHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 67778888775444577888898899876521 10 00000 000111 1112233333 3333444455567777
Q ss_pred EehhHHHHHHHHhhcCCccEEE
Q 020932 163 HSKGGSVVLLYASKYNDIRTFV 184 (319)
Q Consensus 163 ~S~Gg~~a~~~a~~~p~v~~~v 184 (319)
-++.....-.++...|.++.++
T Consensus 82 Gc~as~~~ee~~~~~~~vD~vv 103 (444)
T PRK14325 82 GCVAQQEGEEILKRAPYVDIVF 103 (444)
T ss_pred CchhccCHHHHHhhCCCCcEEE
Confidence 6666665555555567777765
No 393
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=33.79 E-value=1.3e+02 Score=20.52 Aligned_cols=27 Identities=15% Similarity=0.327 Sum_probs=17.2
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHc
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNE 112 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~ 112 (319)
.||+-||.........+..+++.+.++
T Consensus 3 ~llv~HGS~~~~~~~~~~~l~~~l~~~ 29 (117)
T cd03414 3 VVLVGRGSSDPDANADVAKIARLLEEG 29 (117)
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 567778876443324567777777654
No 394
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=33.70 E-value=2.1e+02 Score=23.19 Aligned_cols=61 Identities=8% Similarity=0.037 Sum_probs=40.1
Q ss_pred HHHHHHHHHHcCce-EEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC
Q 020932 102 MVNLAVALQNEGIS-AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND 179 (319)
Q Consensus 102 ~~~~~~~l~~~G~~-v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 179 (319)
...+.+.+.+.|.. ++.+|+| .++...+++.+.+.+.+.|.++.-+.----.-.++...+.
T Consensus 106 ~e~f~~~~~~aGvdGviipDLp-----------------~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~s~g 167 (258)
T PRK13111 106 VERFAADAAEAGVDGLIIPDLP-----------------PEEAEELRAAAKKHGLDLIFLVAPTTTDERLKKIASHASG 167 (258)
T ss_pred HHHHHHHHHHcCCcEEEECCCC-----------------HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCC
Confidence 56788999999986 7788886 2445555665556688888877666644333444444444
No 395
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=33.65 E-value=59 Score=24.73 Aligned_cols=29 Identities=24% Similarity=0.313 Sum_probs=19.6
Q ss_pred EEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 89 LCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 89 ~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
.+.|.|--. ..++..|++.|+.|+.+|.-
T Consensus 4 ~ViGlGyvG-----l~~A~~lA~~G~~V~g~D~~ 32 (185)
T PF03721_consen 4 AVIGLGYVG-----LPLAAALAEKGHQVIGVDID 32 (185)
T ss_dssp EEE--STTH-----HHHHHHHHHTTSEEEEE-S-
T ss_pred EEECCCcch-----HHHHHHHHhCCCEEEEEeCC
Confidence 344655543 67889999999999999974
No 396
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=33.44 E-value=1.1e+02 Score=25.76 Aligned_cols=44 Identities=23% Similarity=0.272 Sum_probs=30.5
Q ss_pred EEEEEccC--CCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC
Q 020932 86 IVVLCHGF--RSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS 130 (319)
Q Consensus 86 ~vv~~hG~--~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~ 130 (319)
+||.+-.+ |++....+-..+++.|.++|+++..+. ||||.....
T Consensus 36 pVIsVGNltvGGTGKTP~v~~L~~~L~~~G~~~~IlS-RGYg~~~~~ 81 (326)
T PF02606_consen 36 PVISVGNLTVGGTGKTPLVIWLARLLQARGYRPAILS-RGYGRKSKG 81 (326)
T ss_pred cEEEEcccccCCCCchHHHHHHHHHHHhcCCceEEEc-CCCCCCCCC
Confidence 46665543 334444677889999999999977776 789876543
No 397
>COG4425 Predicted membrane protein [Function unknown]
Probab=33.30 E-value=1.7e+02 Score=25.86 Aligned_cols=51 Identities=10% Similarity=-0.003 Sum_probs=29.5
Q ss_pred hHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHh----hcCCccEEEEEecccc
Q 020932 141 DDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYAS----KYNDIRTFVNVSGRYD 191 (319)
Q Consensus 141 ~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~----~~p~v~~~v~~~~~~~ 191 (319)
+++...++.|-+....|+++.|-|+|++-...--. -..+.+++...+|++.
T Consensus 382 ~aVy~yw~qLP~~sRPKLylhG~SLGa~~s~~~s~dl~dvl~dfdGaLwSGppf~ 436 (588)
T COG4425 382 EAVYGYWTQLPKSSRPKLYLHGESLGAMGSEAPSMDLFDVLGDFDGALWSGPPFN 436 (588)
T ss_pred HHHHHHHHhCCcCCCCceEEeccccccccCccccccHHHHHhhcccceecCCCCC
Confidence 44444444444445568999999999875433111 1122667766666553
No 398
>PTZ00062 glutaredoxin; Provisional
Probab=33.22 E-value=2.3e+02 Score=22.02 Aligned_cols=83 Identities=14% Similarity=0.182 Sum_probs=50.6
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC-CCceEEEE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA-NRAVGAIL 161 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~ 161 (319)
+.|.+||..|........+-....+.|.+.|.....+|.. .+ .++.+.+..+... ....|.+=
T Consensus 112 ~~~Vvvf~Kg~~~~p~C~~C~~~k~~L~~~~i~y~~~DI~-----------~d-----~~~~~~l~~~sg~~TvPqVfI~ 175 (204)
T PTZ00062 112 NHKILLFMKGSKTFPFCRFSNAVVNMLNSSGVKYETYNIF-----------ED-----PDLREELKVYSNWPTYPQLYVN 175 (204)
T ss_pred cCCEEEEEccCCCCCCChhHHHHHHHHHHcCCCEEEEEcC-----------CC-----HHHHHHHHHHhCCCCCCeEEEC
Confidence 5688899998765444334456667777777777777763 00 2233344333222 34567788
Q ss_pred EEehhHHHHHHHHhhcCCcc
Q 020932 162 GHSKGGSVVLLYASKYNDIR 181 (319)
Q Consensus 162 G~S~Gg~~a~~~a~~~p~v~ 181 (319)
|--.||.--+.-+....+++
T Consensus 176 G~~IGG~d~l~~l~~~G~L~ 195 (204)
T PTZ00062 176 GELIGGHDIIKELYESNSLR 195 (204)
T ss_pred CEEEcChHHHHHHHHcCChh
Confidence 88899987776555544443
No 399
>TIGR00089 RNA modification enzyme, MiaB family. This subfamily is aparrently a part of a larger superfamily of enzymes utilizing both a 4Fe4S cluster and S-adenosyl methionine (SAM) to initiate radical reactions. MiaB acts on a particular isoprenylated Adenine base of certain tRNAs causing thiolation at an aromatic carbon, and probably also transferring a methyl grouyp from SAM to the thiol. The particular substrate of the three other clades is unknown but may be very closely related.
Probab=33.19 E-value=3.4e+02 Score=23.93 Aligned_cols=93 Identities=6% Similarity=0.018 Sum_probs=50.4
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-CCCCCh-HHHHhHHHHHHHHHHhCCCce-EEEEEEe
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-FQYGNY-WREADDLRAVVQYFCGANRAV-GAILGHS 164 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~-~~~~~~-~~~~~d~~~~i~~l~~~~~~~-i~l~G~S 164 (319)
+.++-+|+......-..+...|.+.||.++-.+- ..+-- -...++ ....+.....++.+...+.+. .+++|-+
T Consensus 2 ~~~~t~GC~~N~~ds~~~~~~l~~~g~~~~~~~~----~aD~v~intC~v~~~a~~~~~~~i~~~~~~~~~~~~vvvgGc 77 (429)
T TIGR00089 2 VYIETYGCQMNEADSEIMAGLLKEAGYEVTDDPE----EADVIIINTCAVREKAEQKVRSRLGELAKLKKKNAKIVVAGC 77 (429)
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHHCcCEECCCcc----cCCEEEEecceeechHHHHHHHHHHHHHHhCcCCCEEEEECc
Confidence 4566777776444557788888889996653211 00000 000011 222445666777666554433 5666666
Q ss_pred hhHHHHHHHHhhcCCccEEE
Q 020932 165 KGGSVVLLYASKYNDIRTFV 184 (319)
Q Consensus 165 ~Gg~~a~~~a~~~p~v~~~v 184 (319)
+--...-.++...|.++.++
T Consensus 78 ~a~~~~ee~~~~~~~vd~vv 97 (429)
T TIGR00089 78 LAQREGEELLKRIPEVDIVL 97 (429)
T ss_pred ccccCHHHHHhhCCCCCEEE
Confidence 65555555455567777654
No 400
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=33.08 E-value=16 Score=26.93 Aligned_cols=15 Identities=13% Similarity=0.135 Sum_probs=10.2
Q ss_pred CCceEEEEEEehhHH
Q 020932 154 NRAVGAILGHSKGGS 168 (319)
Q Consensus 154 ~~~~i~l~G~S~Gg~ 168 (319)
.+++|.|+|.|++..
T Consensus 102 ~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 102 SPKKISLVGCSLADN 116 (157)
T ss_dssp -ESEEEEESSS-S-T
T ss_pred CCCEEEEEEecccCC
Confidence 467899999998877
No 401
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=32.85 E-value=50 Score=27.53 Aligned_cols=17 Identities=29% Similarity=0.370 Sum_probs=15.3
Q ss_pred EEEEEehhHHHHHHHHh
Q 020932 159 AILGHSKGGSVVLLYAS 175 (319)
Q Consensus 159 ~l~G~S~Gg~~a~~~a~ 175 (319)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58899999999999876
No 402
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=32.70 E-value=1.1e+02 Score=19.01 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=20.0
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHH-cCceEEEE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQN-EGISAFRF 119 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~-~G~~v~~~ 119 (319)
..|.++++||..... ...+++.++. +|+.++.+
T Consensus 30 ~~~~~~lvhGga~~G----aD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 30 RHPDMVLVHGGAPKG----ADRIAARWARERGVPVIRF 63 (71)
T ss_pred hCCCEEEEECCCCCC----HHHHHHHHHHHCCCeeEEe
Confidence 346788999977333 2445555544 37766554
No 403
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=32.64 E-value=72 Score=28.67 Aligned_cols=42 Identities=14% Similarity=0.280 Sum_probs=35.2
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
.+.|.||++.|+.+++-......+...|..+|++|..+..|.
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 457899999999888866677888999999999999988763
No 404
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=32.56 E-value=1.4e+02 Score=27.01 Aligned_cols=23 Identities=17% Similarity=0.099 Sum_probs=16.4
Q ss_pred HHHHHHHHHcC-ceEEEEcCCCCC
Q 020932 103 VNLAVALQNEG-ISAFRFDFAGNG 125 (319)
Q Consensus 103 ~~~~~~l~~~G-~~v~~~d~~G~G 125 (319)
..++..|.+.| +.|-.+|.....
T Consensus 26 ~~lAa~L~~~G~~~V~iiD~~~~~ 49 (497)
T TIGR02026 26 AYIGGALLDAGYHDVTFLDAMTGP 49 (497)
T ss_pred HHHHHHHHhcCCcceEEecccccC
Confidence 45666777889 688898876443
No 405
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=32.47 E-value=70 Score=26.63 Aligned_cols=34 Identities=15% Similarity=0.085 Sum_probs=27.1
Q ss_pred HhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhh
Q 020932 140 ADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASK 176 (319)
Q Consensus 140 ~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~ 176 (319)
.+.+.++++|+++. ..-++|-|+|+.+++.+..-
T Consensus 121 W~El~~i~~w~~~~---~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 121 WDELKEILDWAKTH---VTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHHHHc---CCCEEEEcHHHHHHHHHcCC
Confidence 55688999998765 36789999999998876654
No 406
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=32.45 E-value=73 Score=25.79 Aligned_cols=34 Identities=18% Similarity=0.212 Sum_probs=26.2
Q ss_pred cCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 020932 92 GFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 92 G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 125 (319)
|=||...+..-..++..|+++|++|+.+|+--.|
T Consensus 7 gKGGVGKTT~~~nLA~~La~~g~rVLliD~D~q~ 40 (268)
T TIGR01281 7 GKGGIGKSTTSSNLSVAFAKLGKRVLQIGCDPKH 40 (268)
T ss_pred cCCcCcHHHHHHHHHHHHHhCCCeEEEEecCccc
Confidence 6666664445678899999999999999985444
No 407
>PRK13236 nitrogenase reductase; Reviewed
Probab=32.43 E-value=88 Score=25.93 Aligned_cols=42 Identities=12% Similarity=0.084 Sum_probs=31.4
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE 128 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~ 128 (319)
+|-+.|=||...+..-..++..|++.|++|+.+|.--.|.+.
T Consensus 8 ~~~~~GKGGVGKTt~a~NLA~~La~~G~rVLliD~D~q~~~~ 49 (296)
T PRK13236 8 QIAFYGKGGIGKSTTSQNTLAAMAEMGQRILIVGCDPKADST 49 (296)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHCCCcEEEEEccCCCCcc
Confidence 444477777775556688999999999999999986555443
No 408
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=32.29 E-value=24 Score=26.63 Aligned_cols=37 Identities=11% Similarity=0.044 Sum_probs=28.7
Q ss_pred HHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcC
Q 020932 139 EADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYN 178 (319)
Q Consensus 139 ~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p 178 (319)
+.+.+.++++|.++.. ...+|-|+|++.|+.++...+
T Consensus 83 Yw~El~~i~dwa~~~v---~stl~iCWgaqaal~~~yGi~ 119 (175)
T cd03131 83 YWEELTEILDWAKTHV---TSTLFSCWAAMAALYYFYGIK 119 (175)
T ss_pred hHHHHHHHHHHHHHhC---cchHHHHHHHHHHHHHHcCcc
Confidence 3566999999997553 577899999999998776543
No 409
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=32.27 E-value=31 Score=30.50 Aligned_cols=52 Identities=12% Similarity=0.101 Sum_probs=34.3
Q ss_pred EEEecCCCCccCcchHHHHHhhCCCCeEEEecCCCccCcccHHHHHHHHHHHHHh
Q 020932 254 LTIHGSSDKIIPLQDAHEFDKIIPNHKLHVVEGANHGYTNHQAELVSVVLDFVKA 308 (319)
Q Consensus 254 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~i~~fl~~ 308 (319)
-+++|..|..|+.+.++.. . +..+....++ +.|..+...+++.+.|.+||..
T Consensus 370 ~~~y~dGDGTV~~~S~~~~-~-~~~~~~~~l~-~~H~~il~n~~v~~~I~~fL~~ 421 (440)
T PLN02733 370 EYTYVDGDGTVPVESAKAD-G-LNAVARVGVP-GDHRGILRDEHVFRILKHWLKV 421 (440)
T ss_pred eEEEeCCCCEEecchhhcc-C-ccccccccCC-chHHHHhcCHHHHHHHHHHHhc
Confidence 3455666777766655432 1 2334445556 7899777788999999999954
No 410
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=32.08 E-value=2.3e+02 Score=21.86 Aligned_cols=68 Identities=18% Similarity=0.152 Sum_probs=34.3
Q ss_pred ceEEEEEccCCCCCCC-hhHHHHHHHHHHcCce--EEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHH
Q 020932 84 SEIVVLCHGFRSTKDD-PSMVNLAVALQNEGIS--AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFC 151 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~--v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~ 151 (319)
+.++++++|-....-. .....+.+.|.+.|-. +..++--+||.........+-....+-...+++++.
T Consensus 145 ~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~ 215 (218)
T PF01738_consen 145 KAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFK 215 (218)
T ss_dssp -S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHC
T ss_pred CCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHH
Confidence 4578888887655422 1235677777666544 445554568876655543333333445566666663
No 411
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=31.98 E-value=3e+02 Score=22.96 Aligned_cols=97 Identities=15% Similarity=0.199 Sum_probs=51.8
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHc--CceEEEEcCCCC-----C----------CCCCCC--CCCChHHH----HhH
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNE--GISAFRFDFAGN-----G----------ESEGSF--QYGNYWRE----ADD 142 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~--G~~v~~~d~~G~-----G----------~s~~~~--~~~~~~~~----~~d 142 (319)
+=.|+-|.|... ....++++|.++ +..+++.|.-|. | .+.-+. ...-++.. .++
T Consensus 170 ~d~fVagvGTGG---TitGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~GIG~~~ip~~~~~~~iD~v~~V~d~~ 246 (300)
T COG0031 170 VDAFVAGVGTGG---TITGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEGIGAGFVPENLDLDLIDEVIRVSDEE 246 (300)
T ss_pred CCEEEEeCCcch---hHHHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCCCCCCcCCcccccccCceEEEECHHH
Confidence 334455554444 246677888665 478999887652 1 111111 01001111 244
Q ss_pred HHHHHHHHHhCCCceEEEEEEehhHHHH--HHHHhhcCCccEEEEEec
Q 020932 143 LRAVVQYFCGANRAVGAILGHSKGGSVV--LLYASKYNDIRTFVNVSG 188 (319)
Q Consensus 143 ~~~~i~~l~~~~~~~i~l~G~S~Gg~~a--~~~a~~~p~v~~~v~~~~ 188 (319)
..+..+.|..+. =.++|-|-|+.++ +.+|.+.+.=+.+|.+-|
T Consensus 247 A~~~~r~La~~e---GilvG~SsGA~~~aa~~~a~~~~~g~~IVti~p 291 (300)
T COG0031 247 AIATARRLAREE---GLLVGISSGAALAAALKLAKELPAGKTIVTILP 291 (300)
T ss_pred HHHHHHHHHHHh---CeeecccHHHHHHHHHHHHHhcCCCCeEEEEEC
Confidence 555555554332 3889999999864 455666554445555544
No 412
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=31.72 E-value=2.2e+02 Score=21.27 Aligned_cols=27 Identities=7% Similarity=0.107 Sum_probs=20.9
Q ss_pred HHHHHHHHHHcCceEEEEcCCCCCCCC
Q 020932 102 MVNLAVALQNEGISAFRFDFAGNGESE 128 (319)
Q Consensus 102 ~~~~~~~l~~~G~~v~~~d~~G~G~s~ 128 (319)
-....+.|..++|-|..+|+--.-+.+
T Consensus 16 GSacv~~FkannywV~siDl~eNe~Ad 42 (236)
T KOG4022|consen 16 GSACVEFFKANNYWVLSIDLSENEQAD 42 (236)
T ss_pred hHHHHHHHHhcCeEEEEEeeccccccc
Confidence 456788899999999999997554433
No 413
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=31.64 E-value=3.5e+02 Score=23.57 Aligned_cols=73 Identities=15% Similarity=0.170 Sum_probs=46.5
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEe
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHS 164 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S 164 (319)
-.|++.--++.+. .+...+++.|.+.|..|..+++. .+|..++++.+ ...+-+++|-+
T Consensus 249 V~l~Y~smyg~T~--~ma~aiaegl~~~gv~v~~~~~~-----------------~~~~~eI~~~i---~~a~~~vvGsP 306 (388)
T COG0426 249 VDLIYDSMYGNTE--KMAQAIAEGLMKEGVDVEVINLE-----------------DADPSEIVEEI---LDAKGLVVGSP 306 (388)
T ss_pred EEEEEecccCCHH--HHHHHHHHHhhhcCCceEEEEcc-----------------cCCHHHHHHHH---hhcceEEEecC
Confidence 3455555555555 57889999999999999999984 12444455444 22346888888
Q ss_pred ---------hhHHHHHHHHhhcCC
Q 020932 165 ---------KGGSVVLLYASKYND 179 (319)
Q Consensus 165 ---------~Gg~~a~~~a~~~p~ 179 (319)
++..+....+...++
T Consensus 307 T~~~~~~p~i~~~l~~v~~~~~~~ 330 (388)
T COG0426 307 TINGGAHPPIQTALGYVLALAPKN 330 (388)
T ss_pred cccCCCCchHHHHHHHHHhccCcC
Confidence 455555555555444
No 414
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=31.61 E-value=1e+02 Score=25.67 Aligned_cols=61 Identities=15% Similarity=0.021 Sum_probs=34.5
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHH
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYF 150 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l 150 (319)
..+||.+.|.-.++ --+..|+.+||.|..+=++.+-.-+........+...+|+..+.+.|
T Consensus 6 ~~VvvamSgGVDSs------Vaa~Ll~~~g~~v~gv~M~nWd~~de~~s~cp~e~D~~da~~Vc~~L 66 (377)
T KOG2805|consen 6 DRVVVAMSGGVDSS------VAARLLAARGYNVTGVFMKNWDSLDEFGSQCPAERDWKDAKRVCKQL 66 (377)
T ss_pred ceEEEEecCCchHH------HHHHHHHhcCCCeeEEeeeccccccccccCCCchhhHHHHHHHHHHh
Confidence 34566666655544 12456788899999887776632222222233444555666555554
No 415
>COG0621 MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]
Probab=31.57 E-value=2.9e+02 Score=24.57 Aligned_cols=85 Identities=7% Similarity=0.013 Sum_probs=51.3
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCce----------EEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCce
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGIS----------AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAV 157 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~----------v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~ 157 (319)
+++..+|+......-..++..|...||. |+.++--+. .+...+-+...|..+...+++.
T Consensus 5 v~i~T~GC~~N~~DSe~m~~~L~~~G~~~~~~~~~eADvviiNTC~V-----------~~~a~~k~~~~i~~~~~~~p~~ 73 (437)
T COG0621 5 VYIETLGCQMNLYDSERMAGLLEAAGYEELVEDPEEADVVIINTCAV-----------REKAEQKVRSAIGELKKLKPDA 73 (437)
T ss_pred EEEEecCCCccHHHHHHHHHHHHHcCCccccCCcccCCEEEEecCee-----------eehHHHHHHHHHHHHHHhCCCC
Confidence 5666777766434446778888888983 444443211 1222445666666666666666
Q ss_pred EEEEEEehhHHHHHHHHhhcCCccEEE
Q 020932 158 GAILGHSKGGSVVLLYASKYNDIRTFV 184 (319)
Q Consensus 158 i~l~G~S~Gg~~a~~~a~~~p~v~~~v 184 (319)
.++++-|++-.- -....+.|.++.++
T Consensus 74 ~iiVtGC~aq~~-~~i~~~~p~vd~v~ 99 (437)
T COG0621 74 KIIVTGCLAQAE-EEILERAPEVDIVL 99 (437)
T ss_pred EEEEeCCccccC-HHHHhhCCCceEEE
Confidence 777877777666 44455567666555
No 416
>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase. Members of this family use energey from ATP hydrolysis and transfer electrons through a Fe4-S4 cluster to other subunit for reduction of substrate.
Probab=31.47 E-value=1e+02 Score=23.95 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=27.1
Q ss_pred cCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC
Q 020932 92 GFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE 126 (319)
Q Consensus 92 G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 126 (319)
|=|+...+..-..++..|++.|++|+.+|.--.|.
T Consensus 7 gKGGvGKTt~~~nLA~~la~~G~rvLliD~D~q~~ 41 (212)
T cd02117 7 GKGGIGKSTTSQNLSAALAEMGKKVLQVGCDPKAD 41 (212)
T ss_pred CCCcCcHHHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 66666654556889999999999999999765553
No 417
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=31.27 E-value=1.2e+02 Score=23.32 Aligned_cols=39 Identities=15% Similarity=0.254 Sum_probs=23.1
Q ss_pred EEEccCCCCCCChhHHHHHHHHHH----cCceEEEEcCCCCCC
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQN----EGISAFRFDFAGNGE 126 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~----~G~~v~~~d~~G~G~ 126 (319)
+++-|..++..+.....++..++. ....++++|..|.+.
T Consensus 41 ~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l 83 (205)
T PF01580_consen 41 LLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDL 83 (205)
T ss_dssp EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCC
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCcccc
Confidence 444455555533455666667666 578999999987643
No 418
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=31.24 E-value=3.2e+02 Score=23.05 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=24.5
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
++...|.|++- .....+++.|.+.||.|..+-..+
T Consensus 5 ~i~~~g~gG~~--~~~~~la~~L~~~g~ev~vv~~~~ 39 (357)
T PRK00726 5 LLAGGGTGGHV--FPALALAEELKKRGWEVLYLGTAR 39 (357)
T ss_pred EEEcCcchHhh--hHHHHHHHHHHhCCCEEEEEECCC
Confidence 44445666555 456789999999999988775433
No 419
>PRK09936 hypothetical protein; Provisional
Probab=31.10 E-value=1.8e+02 Score=24.10 Aligned_cols=28 Identities=14% Similarity=0.281 Sum_probs=26.1
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCCCCC
Q 020932 100 PSMVNLAVALQNEGISAFRFDFAGNGES 127 (319)
Q Consensus 100 ~~~~~~~~~l~~~G~~v~~~d~~G~G~s 127 (319)
..|+.+.+.+...|++.+++.+-++|++
T Consensus 38 ~qWq~~~~~~~~~G~~tLivQWt~yG~~ 65 (296)
T PRK09936 38 TQWQGLWSQLRLQGFDTLVVQWTRYGDA 65 (296)
T ss_pred HHHHHHHHHHHHcCCcEEEEEeeeccCC
Confidence 5799999999999999999999999988
No 420
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=31.02 E-value=1.2e+02 Score=24.74 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=30.1
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
....|.+.-+-++...+..-..++..|+..|.+|+.+|.
T Consensus 102 ~~~vi~vts~~~g~Gktt~a~nLA~~la~~g~~VllID~ 140 (274)
T TIGR03029 102 GRKALAVVSAKSGEGCSYIAANLAIVFSQLGEKTLLIDA 140 (274)
T ss_pred CCeEEEEECCCCCCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 445667776666666545668899999999999999997
No 421
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=30.97 E-value=1.3e+02 Score=25.29 Aligned_cols=45 Identities=9% Similarity=0.093 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCCccEEEEE
Q 020932 142 DLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFVNV 186 (319)
Q Consensus 142 d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~ 186 (319)
.+.+.++.|++++.+-|+++.|+-|-..-..+|.+.++|+.++.-
T Consensus 195 ~~~~~v~~Lr~~gvD~II~LsH~g~~~~d~~lA~~v~gIDvIigG 239 (313)
T cd08162 195 QIQPSIDALTAQGINKIILLSHLQQISIEQALAALLSGVDVIIAG 239 (313)
T ss_pred HHHHHHHHHHHCCCCEEEEEecccccchHHHHHhcCCCCCEEEeC
Confidence 366778888877788899999984434456677777888877643
No 422
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=30.90 E-value=1.3e+02 Score=25.15 Aligned_cols=42 Identities=26% Similarity=0.356 Sum_probs=28.8
Q ss_pred EEEEEccC--CCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC
Q 020932 86 IVVLCHGF--RSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE 128 (319)
Q Consensus 86 ~vv~~hG~--~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~ 128 (319)
+||.+-.+ |++.....-..+++.|.++|+.+..+. ||||...
T Consensus 29 PVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~IlS-RGYg~~~ 72 (311)
T TIGR00682 29 PVVIVGNLSVGGTGKTPVVVWLAELLKDRGLRVGVLS-RGYGSKT 72 (311)
T ss_pred CEEEEeccccCCcChHHHHHHHHHHHHHCCCEEEEEC-CCCCCCC
Confidence 45555443 334333667788899999999987776 6998754
No 423
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=30.90 E-value=60 Score=26.52 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=26.3
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 125 (319)
++|++-|+.+++-+.....+.+.|.+.++.|+.++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 5788899999986656678888888889999888854333
No 424
>PRK06490 glutamine amidotransferase; Provisional
Probab=30.88 E-value=2.8e+02 Score=22.18 Aligned_cols=83 Identities=14% Similarity=0.036 Sum_probs=43.2
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC-CCCC----C--C------CCCCCCChHHHHhHHHHHHHHH
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA-GNGE----S--E------GSFQYGNYWREADDLRAVVQYF 150 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~-G~G~----s--~------~~~~~~~~~~~~~d~~~~i~~l 150 (319)
...+|+.|--.... ..+.+.|.+.|+.+-.++.. |--. . + ++........+..++.++|+.+
T Consensus 8 ~~vlvi~h~~~~~~-----g~l~~~l~~~g~~~~v~~~~~~~~~p~~l~~~dgvii~Ggp~~~~d~~~wi~~~~~~i~~~ 82 (239)
T PRK06490 8 RPVLIVLHQERSTP-----GRVGQLLQERGYPLDIRRPRLGDPLPDTLEDHAGAVIFGGPMSANDPDDFIRREIDWISVP 82 (239)
T ss_pred ceEEEEecCCCCCC-----hHHHHHHHHCCCceEEEeccCCCCCCCcccccCEEEEECCCCCCCCCchHHHHHHHHHHHH
Confidence 34566667665554 33566677777776655422 1000 0 0 1111111123344445555544
Q ss_pred HhCCCceEEEEEEehhHHHHHHHH
Q 020932 151 CGANRAVGAILGHSKGGSVVLLYA 174 (319)
Q Consensus 151 ~~~~~~~i~l~G~S~Gg~~a~~~a 174 (319)
... ++-++|.|+|..+...+.
T Consensus 83 ~~~---~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 83 LKE---NKPFLGICLGAQMLARHL 103 (239)
T ss_pred HHC---CCCEEEECHhHHHHHHHc
Confidence 332 356899999999877754
No 425
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=30.85 E-value=1.9e+02 Score=20.17 Aligned_cols=62 Identities=10% Similarity=0.182 Sum_probs=33.4
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHc-Cc-eEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEE
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNE-GI-SAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 161 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 161 (319)
..||+-||......+..+..+++.+.++ ++ .|. .-+-.++ .-++.+.++.+..++.+++.++
T Consensus 3 ~lvlv~hGS~~~~~~~~~~~~~~~l~~~~~~~~v~-~afle~~--------------~P~l~~~l~~l~~~g~~~v~vv 66 (126)
T PRK00923 3 GLLLVGHGSRLPYNKEVVTKIAEKIKEKHPFYIVE-VGFMEFN--------------EPTIPEALKKLIGTGADKIIVV 66 (126)
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHhCCCCeEE-EEEEEcC--------------CCCHHHHHHHHHHcCCCEEEEE
Confidence 4567779986543223566777777664 22 221 1111000 1235566666666677777766
No 426
>cd02042 ParA ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in R. etli Sym plasmid. This operon is involved in the plasmid replication and partition.
Probab=30.82 E-value=1e+02 Score=20.36 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=23.0
Q ss_pred EEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 89 LCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 89 ~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
+...-|+...+..-..++..|+++|.+|+.+|.-
T Consensus 4 ~~~~kgG~Gkst~~~~la~~~~~~~~~vl~~d~d 37 (104)
T cd02042 4 VANQKGGVGKTTTAVNLAAALARRGKRVLLIDLD 37 (104)
T ss_pred EEeCCCCcCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 3333444443345677888888889999998863
No 427
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=30.80 E-value=2.2e+02 Score=23.19 Aligned_cols=49 Identities=6% Similarity=0.078 Sum_probs=34.0
Q ss_pred HHHHHHHHHHcCce-EEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhH
Q 020932 102 MVNLAVALQNEGIS-AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGG 167 (319)
Q Consensus 102 ~~~~~~~l~~~G~~-v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg 167 (319)
...+.+.+++.|.. ++.+|+| .++...+++.+++.+...+.++.-..--
T Consensus 108 ~e~F~~~~~~aGvdgviipDLP-----------------~ee~~~~~~~~~~~gi~~I~lv~PtT~~ 157 (263)
T CHL00200 108 INKFIKKISQAGVKGLIIPDLP-----------------YEESDYLISVCNLYNIELILLIAPTSSK 157 (263)
T ss_pred HHHHHHHHHHcCCeEEEecCCC-----------------HHHHHHHHHHHHHcCCCEEEEECCCCCH
Confidence 46788888998987 7788997 2334455555555588888888666543
No 428
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=30.76 E-value=2.1e+02 Score=21.50 Aligned_cols=53 Identities=17% Similarity=0.092 Sum_probs=35.2
Q ss_pred HHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCC-ceEEEEEEehh
Q 020932 108 ALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANR-AVGAILGHSKG 166 (319)
Q Consensus 108 ~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~-~~i~l~G~S~G 166 (319)
.|.+.|+..+.+|.-+.=..... .....++.+.++.+++... ++|.++--|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~~~------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPPYE------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCCCc------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 38889999999998644221111 2224566667777766643 48999998886
No 429
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=30.72 E-value=3.7e+02 Score=23.52 Aligned_cols=92 Identities=9% Similarity=-0.043 Sum_probs=46.0
Q ss_pred eEEEEEccCCCCCC-ChhHHHHHHHHHHcCceEEEEcCCCC--CCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEE
Q 020932 85 EIVVLCHGFRSTKD-DPSMVNLAVALQNEGISAFRFDFAGN--GESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 161 (319)
Q Consensus 85 ~~vv~~hG~~~~~~-~~~~~~~~~~l~~~G~~v~~~d~~G~--G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 161 (319)
.++|+++-...... +.........|.+.|+.|+-+..--+ |+... -...+.++.++.+...+..-.....+++.+.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~-g~~~~~~~i~~~v~~~~~~~~~~~~~~vlit 191 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGK-GRLAEPETIVKAAEREFSPKEDLEGKRVLIT 191 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccC-CCCCCHHHHHHHHHHHHhhccccCCceEEEe
Confidence 45666666443331 13457778888888987766553211 33221 1122334444444443322111234566666
Q ss_pred EE------------------ehhHHHHHHHHhhc
Q 020932 162 GH------------------SKGGSVVLLYASKY 177 (319)
Q Consensus 162 G~------------------S~Gg~~a~~~a~~~ 177 (319)
|- .+|..+|..++.+.
T Consensus 192 ~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G 225 (390)
T TIGR00521 192 AGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG 225 (390)
T ss_pred cCCccCCCCceeeecCCCcchHHHHHHHHHHHCC
Confidence 66 35566666665553
No 430
>TIGR02016 BchX chlorophyllide reductase iron protein subunit X. This model represents the X subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase. This subunit is homologous to the nitrogenase component II, or "iron" protein.
Probab=30.67 E-value=82 Score=26.14 Aligned_cols=35 Identities=11% Similarity=0.224 Sum_probs=27.0
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
|.+. |=|+...+..-..++..|+.+|++|+.+|.-
T Consensus 3 Iav~-gKGGvGKTT~a~nLA~~La~~g~rVLlID~D 37 (296)
T TIGR02016 3 IAIY-GKGGSGKSFTTTNLSHMMAEMGKRVLQLGCD 37 (296)
T ss_pred EEEE-CCCCCCHHHHHHHHHHHHHHCCCeEEEEEec
Confidence 3344 7777665456688999999999999999984
No 431
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=30.35 E-value=2.4e+02 Score=21.18 Aligned_cols=39 Identities=15% Similarity=0.269 Sum_probs=28.2
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
..+.++.+.|..++..+.....+...+...|+.++.+|-
T Consensus 16 ~~~~~i~i~G~~GsGKstla~~l~~~l~~~~~~~~~l~~ 54 (184)
T TIGR00455 16 HRGVVIWLTGLSGSGKSTIANALEKKLESKGYRVYVLDG 54 (184)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECC
Confidence 456789999988877544566777777777777777753
No 432
>PRK14336 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=30.21 E-value=3.5e+02 Score=23.85 Aligned_cols=93 Identities=10% Similarity=-0.001 Sum_probs=48.0
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCC-CCCCh-HHHHhHHH---HHHHHHHhCCCceEEEEE
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSF-QYGNY-WREADDLR---AVVQYFCGANRAVGAILG 162 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~-~~~~~-~~~~~d~~---~~i~~l~~~~~~~i~l~G 162 (319)
++++-+|+......-..+...|.+.||.++-- .- ..+--- ...++ +...+.+. ..++.+++.++...++++
T Consensus 4 ~~i~t~GC~~N~~dse~~~~~l~~~G~~~~~~-~~---~AD~viiNTC~v~~~a~~~~~~~i~~~~~~~~~~~~~~ivv~ 79 (418)
T PRK14336 4 YYLWTIGCQMNQAESERLGRLFELWGYSLADK-AE---DAELVLVNSCVVREHAENKVINRLHLLRKLKNKNPKLKIALT 79 (418)
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHCcCEECCC-cc---cCCEEEEecccEecHHHHHHHHHHHHHHHHHhhCCCCEEEEE
Confidence 56777777774444567888888899865531 10 111000 01111 12223333 333333333445567776
Q ss_pred EehhHHHHHHHHhhcCCccEEE
Q 020932 163 HSKGGSVVLLYASKYNDIRTFV 184 (319)
Q Consensus 163 ~S~Gg~~a~~~a~~~p~v~~~v 184 (319)
-|+.-...-.++...|+++.++
T Consensus 80 GC~~~~~~~~l~~~~p~vd~v~ 101 (418)
T PRK14336 80 GCLVGQDISLIRKKFPFVDYIF 101 (418)
T ss_pred CChhcCCHHHHHhhCCCCcEEE
Confidence 6666555555555667776665
No 433
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=30.13 E-value=1.3e+02 Score=24.28 Aligned_cols=34 Identities=21% Similarity=0.060 Sum_probs=26.3
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 120 (319)
..|+++-|-|.+... -.-.++.|..+||.|.++-
T Consensus 61 ~~V~VlcG~GNNGGD--Glv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGD--GLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchh--HHHHHHHHHHCCCeEEEEE
Confidence 457788888888843 5567899999999987765
No 434
>PRK14329 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=29.91 E-value=4e+02 Score=23.92 Aligned_cols=95 Identities=8% Similarity=-0.016 Sum_probs=49.7
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-CCCCCh-HHHHhHHHHHH---HHHHhCCCceEEEEE
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-FQYGNY-WREADDLRAVV---QYFCGANRAVGAILG 162 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~-~~~~~~-~~~~~d~~~~i---~~l~~~~~~~i~l~G 162 (319)
++++-+|+......-..++..|.+.||.+.. +.- ..+-- -...++ ....+.+...+ ..+++.+++..+++|
T Consensus 26 ~~i~t~GC~~N~~dse~~~~~l~~~G~~~~~-~~~---~ADiviiNTC~v~~~a~~k~~~~i~~~~~~k~~~p~~~ivvg 101 (467)
T PRK14329 26 LFIESYGCQMNFADSEIVASILQMAGYNTTE-NLE---EADLVLVNTCSIRDNAEQKVRKRLEKFNALKKKNPKLIVGVL 101 (467)
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHCcCEECC-Ccc---cCCEEEEeCcceechHHHHHHHHHHHHHHHHhhCCCcEEEEE
Confidence 6778888877544457788889889997543 111 01100 001111 11223444445 334444455567777
Q ss_pred EehhHHHHHHHHhhcCCccEEEEE
Q 020932 163 HSKGGSVVLLYASKYNDIRTFVNV 186 (319)
Q Consensus 163 ~S~Gg~~a~~~a~~~p~v~~~v~~ 186 (319)
-++--...-.++...|+++.++.-
T Consensus 102 Gc~a~~~~~~~l~~~~~vD~vv~~ 125 (467)
T PRK14329 102 GCMAERLKDKLLEEEKIVDLVVGP 125 (467)
T ss_pred CChhcCcHHHHHhcCCCceEEECC
Confidence 666555554544444546666643
No 435
>PLN02757 sirohydrochlorine ferrochelatase
Probab=29.32 E-value=1.5e+02 Score=21.81 Aligned_cols=64 Identities=8% Similarity=0.114 Sum_probs=34.3
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEE
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAIL 161 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~ 161 (319)
...||+-||.-....+..+..+++.+.++ ++..+-.-+-.. .--++.+.++.+..++.++|+++
T Consensus 14 ~~lllvgHGSrd~~a~~~~~~la~~l~~~~~~~~V~~aFle~--------------~~Psl~eal~~l~~~g~~~vvVv 78 (154)
T PLN02757 14 DGVVIVDHGSRRKESNLMLEEFVAMYKQKTGHPIVEPAHMEL--------------AEPSIKDAFGRCVEQGASRVIVS 78 (154)
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhCCCCcEEEEEEec--------------CCCCHHHHHHHHHHCCCCEEEEE
Confidence 45677778887655434566777777543 333221111100 01235556666555577777765
No 436
>PRK07667 uridine kinase; Provisional
Probab=29.22 E-value=1.2e+02 Score=23.24 Aligned_cols=42 Identities=17% Similarity=0.297 Sum_probs=31.1
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGN 124 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~ 124 (319)
..+.||.+-|..+++.+..-..+.+.|...|..+..++...+
T Consensus 15 ~~~~iIgI~G~~gsGKStla~~L~~~l~~~~~~~~~i~~Dd~ 56 (193)
T PRK07667 15 ENRFILGIDGLSRSGKTTFVANLKENMKQEGIPFHIFHIDDY 56 (193)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCcEEEEEcCcc
Confidence 345889999998888655567777888777888777766553
No 437
>TIGR02540 gpx7 putative glutathione peroxidase Gpx7. This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.
Probab=29.19 E-value=2.2e+02 Score=20.54 Aligned_cols=62 Identities=15% Similarity=0.127 Sum_probs=33.5
Q ss_pred EEEeCCCCceEEEEEEeCCCceEEEEEccCCCCCCCh---hHHHHHHHHHHcCceEEEEcCCCCCCC
Q 020932 64 LVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDDP---SMVNLAVALQNEGISAFRFDFAGNGES 127 (319)
Q Consensus 64 ~~~~~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~~---~~~~~~~~l~~~G~~v~~~d~~G~G~s 127 (319)
+++.+.+|..+... .-..++.||......+..... .+..+.+.+.+.|+.++.++..-+|.+
T Consensus 5 f~l~~~~G~~~~l~--~~~Gk~vvv~~~as~C~~c~~~~~~l~~l~~~~~~~~~~v~~i~~~~~~~~ 69 (153)
T TIGR02540 5 FEVKDARGRTVSLE--KYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGES 69 (153)
T ss_pred ceeECCCCCEecHH--HhCCCEEEEEEeCCCCCchhhhHHHHHHHHHHHhhCCeEEEEEeccccccC
Confidence 34555567554421 112455555544443333212 234666667777899999987545544
No 438
>PLN02204 diacylglycerol kinase
Probab=29.15 E-value=4.4e+02 Score=24.62 Aligned_cols=36 Identities=6% Similarity=0.131 Sum_probs=25.4
Q ss_pred CceEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEE
Q 020932 83 SSEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFR 118 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~ 118 (319)
.+..+|++|..++.... ..|..+.+.|...|+.+-+
T Consensus 159 ~k~llVivNP~sGkg~~~~~~~~V~p~f~~a~i~~~v 195 (601)
T PLN02204 159 PKNLLVFVHPLSGKGSGSRTWETVSPIFIRAKVKTKV 195 (601)
T ss_pred CceEEEEECCCCCCcchHHHHHHHHHHHHHcCCeEEE
Confidence 45678999988775532 4577888889888876433
No 439
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=28.93 E-value=1.5e+02 Score=25.44 Aligned_cols=59 Identities=15% Similarity=0.097 Sum_probs=34.0
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHH
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYF 150 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l 150 (319)
..+|+.+.|.-.++ --+..|.++||.|+.+-+.-+..... ..........|+..+.+.|
T Consensus 4 ~kV~v~mSGGVDSS------VaA~lLk~QGyeViGl~m~~~~~~~~--~~C~s~~d~~da~~va~~L 62 (356)
T COG0482 4 KKVLVGMSGGVDSS------VAAYLLKEQGYEVIGLFMKNWDEDGG--GGCCSEEDLRDAERVADQL 62 (356)
T ss_pred cEEEEEccCCHHHH------HHHHHHHHcCCeEEEEEEEeeccCCC--CcCCchhHHHHHHHHHHHh
Confidence 44566666655544 13456778899999998876664111 1112234455566665555
No 440
>PRK13768 GTPase; Provisional
Probab=28.91 E-value=85 Score=25.30 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=26.9
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
++++-|.++...+.....++..+...|.+|+.+|+
T Consensus 4 ~i~v~G~~G~GKTt~~~~~~~~l~~~g~~v~~i~~ 38 (253)
T PRK13768 4 IVFFLGTAGSGKTTLTKALSDWLEEQGYDVAIVNL 38 (253)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHhcCCceEEEEC
Confidence 56666777777555667888899889999888875
No 441
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=28.85 E-value=2.6e+02 Score=23.06 Aligned_cols=92 Identities=12% Similarity=0.114 Sum_probs=47.6
Q ss_pred EccCCCCCCChhHHHHHHHHHHcCceEEEE------cCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC---CCceEEE
Q 020932 90 CHGFRSTKDDPSMVNLAVALQNEGISAFRF------DFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA---NRAVGAI 160 (319)
Q Consensus 90 ~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~------d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~---~~~~i~l 160 (319)
+||.-+++. -...|...|++|+++ +++|||...+.... .+++.++++.+... ..=..++
T Consensus 11 v~G~vGn~A------A~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~~------~e~l~~~l~~l~~~~~~~~~davl 78 (281)
T COG2240 11 VYGSVGNSA------AIFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVMP------PEQLADLLNGLEAIDKLGECDAVL 78 (281)
T ss_pred eecccccHh------HHHHHHHcCCceeeeceEEecCCCCCCCCCCcCCC------HHHHHHHHHHHHhcccccccCEEE
Confidence 456666552 234566678887765 68899986654422 23344444444331 2223566
Q ss_pred EEEehhHHHHH----HHHh-hcCCccEEEEEecccccc
Q 020932 161 LGHSKGGSVVL----LYAS-KYNDIRTFVNVSGRYDLK 193 (319)
Q Consensus 161 ~G~S~Gg~~a~----~~a~-~~p~v~~~v~~~~~~~~~ 193 (319)
-|+=-.+..+- .+.+ +..+-+.+++++|...-.
T Consensus 79 tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~ 116 (281)
T COG2240 79 TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDP 116 (281)
T ss_pred EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCC
Confidence 67632222221 1111 222356778888865443
No 442
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=28.63 E-value=1.2e+02 Score=22.94 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=31.9
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE 126 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 126 (319)
.++|+.+=|..++..+.....+...|..+|++|-.+-+.|||.
T Consensus 5 ~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~ 47 (173)
T PRK10751 5 MIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDM 47 (173)
T ss_pred CceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCc
Confidence 4567777787777655566888888988899887777766654
No 443
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=28.54 E-value=3.5e+02 Score=22.58 Aligned_cols=98 Identities=15% Similarity=0.112 Sum_probs=60.8
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCC--------------------CChHHHHhHHHH
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQY--------------------GNYWREADDLRA 145 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~--------------------~~~~~~~~d~~~ 145 (319)
..|++-|.+.+... ....+++.....|-.++.+|.---+........ ..-...+.-..+
T Consensus 3 krIyVvgT~DTKg~-EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A 81 (401)
T COG5441 3 KRIYVVGTADTKGE-ELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEA 81 (401)
T ss_pred ceEEEEecCCCcch-hHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHH
Confidence 45777788887753 566777888888999999997532221110000 000122233346
Q ss_pred HHHHHHhC-CCceEEEEEEehhHHHHHHHHhhcCC-ccEEE
Q 020932 146 VVQYFCGA-NRAVGAILGHSKGGSVVLLYASKYND-IRTFV 184 (319)
Q Consensus 146 ~i~~l~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v 184 (319)
+.+.+.++ +..-++-+|-|.|..++.-.+...|- +-+++
T Consensus 82 ~~r~l~sR~dV~gmig~GGsgGT~lit~~m~~LPlgvPK~m 122 (401)
T COG5441 82 FVRFLSSRGDVAGMIGMGGSGGTALITPAMRRLPLGVPKVM 122 (401)
T ss_pred HHHHhhcccchhheeecCCCcchHhhhhHHHhcCcCCccee
Confidence 66667666 45567888999999988888888775 44443
No 444
>PHA02114 hypothetical protein
Probab=28.24 E-value=1.1e+02 Score=20.33 Aligned_cols=35 Identities=11% Similarity=0.250 Sum_probs=27.3
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 120 (319)
-.+||+=-.+..+. ..|..+...|...||+|++-.
T Consensus 82 ~gtivldvn~amsr--~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 82 YGTIVLDVNYAMSR--APWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred cCeEEEEehhhhcc--CcHHHHHHHHHhcCceeeehh
Confidence 35677766677776 458999999999999999754
No 445
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=28.21 E-value=53 Score=23.16 Aligned_cols=34 Identities=21% Similarity=0.161 Sum_probs=23.4
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
++...|.+++- .-+..+++.|.++|++|...-.+
T Consensus 2 li~~~Gt~Ghv--~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 2 LIATGGTRGHV--YPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEESSHHHH--HHHHHHHHHHHHTT-EEEEEETG
T ss_pred EEEEcCChhHH--HHHHHHHHHHhccCCeEEEeecc
Confidence 34455555655 56788999999999999765443
No 446
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=28.10 E-value=2e+02 Score=25.48 Aligned_cols=45 Identities=13% Similarity=0.141 Sum_probs=26.3
Q ss_pred hHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEEEEec
Q 020932 141 DDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFVNVSG 188 (319)
Q Consensus 141 ~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~ 188 (319)
.+...+.+++.....+++.++| ||.+++.+|....+ =..+.++..
T Consensus 134 ~~~~~l~~~l~~~~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~ 179 (438)
T PRK13512 134 EDTDAIDQFIKANQVDKALVVG---AGYISLEVLENLYERGLHPTLIHR 179 (438)
T ss_pred HHHHHHHHHHhhcCCCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEec
Confidence 3444444444443467899998 67888887765443 224455543
No 447
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=28.07 E-value=67 Score=23.94 Aligned_cols=20 Identities=35% Similarity=0.383 Sum_probs=16.3
Q ss_pred EEEEEEehhHHHHHHHHhhc
Q 020932 158 GAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 158 i~l~G~S~Gg~~a~~~a~~~ 177 (319)
-.+.|-|.||.+|+.++...
T Consensus 29 d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 29 DVISGTSAGALNAALLALGY 48 (204)
T ss_dssp SEEEEECCHHHHHHHHHTC-
T ss_pred cEEEEcChhhhhHHHHHhCC
Confidence 37899999999998877763
No 448
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=27.94 E-value=1.1e+02 Score=26.77 Aligned_cols=41 Identities=12% Similarity=0.183 Sum_probs=29.0
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 125 (319)
.+|.+...=||.+.+..-..++..|+..|++|+++|+--.|
T Consensus 122 ~vIav~n~KGGvGKTTta~nLA~~LA~~G~rVLlIDlDpQ~ 162 (405)
T PRK13869 122 QVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAVDLDPQA 162 (405)
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHhcCCceEEEcCCCCC
Confidence 34555555555554445678899999999999999985444
No 449
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=27.90 E-value=2.1e+02 Score=19.74 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=20.6
Q ss_pred cCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 020932 92 GFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 92 G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
|...+.. .+-..+.+.|.++||.|+.++.++
T Consensus 7 GaS~~~~-~~g~~v~~~l~~~G~~v~~Vnp~~ 37 (116)
T PF13380_consen 7 GASDNPG-KFGYRVLRNLKAAGYEVYPVNPKG 37 (116)
T ss_dssp T--SSTT-SHHHHHHHHHHHTT-EEEEESTTC
T ss_pred cccCCCC-ChHHHHHHHHHhCCCEEEEECCCc
Confidence 4444433 345667888888999999999876
No 450
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=27.78 E-value=1.4e+02 Score=25.52 Aligned_cols=65 Identities=17% Similarity=0.056 Sum_probs=37.2
Q ss_pred HHHHHHHHHcCceEEEEcCCC------------CCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHH
Q 020932 103 VNLAVALQNEGISAFRFDFAG------------NGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVV 170 (319)
Q Consensus 103 ~~~~~~l~~~G~~v~~~d~~G------------~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a 170 (319)
..+.+.|.++|++|..+-+-- --.|.++-+. ...+.....++.+.. .++=++|.|+|=.+.
T Consensus 191 ~nIlr~L~~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPGDP----~~~~~~i~~ik~l~~---~~iPifGICLGHQll 263 (368)
T COG0505 191 RNILRELVKRGCRVTVVPADTSAEEILALNPDGIFLSNGPGDP----APLDYAIETIKELLG---TKIPIFGICLGHQLL 263 (368)
T ss_pred HHHHHHHHHCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCCCh----hHHHHHHHHHHHHhc---cCCCeEEEcHHHHHH
Confidence 567889999999988875531 1122222222 223444444444422 224788999998876
Q ss_pred HHHH
Q 020932 171 LLYA 174 (319)
Q Consensus 171 ~~~a 174 (319)
.++.
T Consensus 264 alA~ 267 (368)
T COG0505 264 ALAL 267 (368)
T ss_pred HHhc
Confidence 5543
No 451
>PLN02412 probable glutathione peroxidase
Probab=27.75 E-value=2.2e+02 Score=21.12 Aligned_cols=59 Identities=8% Similarity=0.163 Sum_probs=34.5
Q ss_pred EEEEeCCCCceEEEEEEeCCCceEEEEEccCCCCCCC---hhHHHHHHHHHHcCceEEEEcCCC
Q 020932 63 ELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDD---PSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 63 ~~~~~~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
.+++++.+|..+.. ..-..+++||.+....+.... ..+..+.+.+.+.|+.|+.+....
T Consensus 11 df~l~d~~G~~v~l--~~~~gk~vlv~f~a~~C~~c~~e~~~l~~l~~~~~~~g~~vvgv~~~~ 72 (167)
T PLN02412 11 DFTVKDIGGNDVSL--NQYKGKVLLIVNVASKCGLTDSNYKELNVLYEKYKEQGFEILAFPCNQ 72 (167)
T ss_pred ceEEECCCCCEEeH--HHhCCCEEEEEEeCCCCCChHHHHHHHHHHHHHHhhCCcEEEEecccc
Confidence 34555566765542 121345666666554443321 234567777888899999998653
No 452
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=27.71 E-value=2.4e+02 Score=21.87 Aligned_cols=58 Identities=19% Similarity=0.209 Sum_probs=34.2
Q ss_pred ceEEEEEccCCCCCCC-hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHH
Q 020932 84 SEIVVLCHGFRSTKDD-PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQ 148 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~ 148 (319)
+.+|+++||-....-. .......+.|.+.|.+|-.-.++|-|.+- ..+...++.++++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i-------~~~~~~~~~~~l~ 213 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI-------SPEELRDLREFLE 213 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS---------HHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC-------CHHHHHHHHHHHh
Confidence 4589999999887632 22467778888888877777777544332 1344555555554
No 453
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=27.69 E-value=2.7e+02 Score=22.84 Aligned_cols=66 Identities=17% Similarity=-0.054 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhH
Q 020932 101 SMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGG 167 (319)
Q Consensus 101 ~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg 167 (319)
..+.+++.-++.|+.-+.+|---.+.........+-..-..|+.+++++.++++.+ |.|..||-++
T Consensus 33 ~~k~yIDfAa~~G~eYvlvD~GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~KgVg-i~lw~~~~~~ 98 (273)
T PF10566_consen 33 TQKRYIDFAAEMGIEYVLVDAGWYGWEKDDDFDFTKPIPDFDLPELVDYAKEKGVG-IWLWYHSETG 98 (273)
T ss_dssp HHHHHHHHHHHTT-SEEEEBTTCCGS--TTT--TT-B-TT--HHHHHHHHHHTT-E-EEEEEECCHT
T ss_pred HHHHHHHHHHHcCCCEEEeccccccccccccccccccCCccCHHHHHHHHHHcCCC-EEEEEeCCcc
Confidence 46777888888999988888533321101100001112247899999999888654 8999999883
No 454
>PTZ00056 glutathione peroxidase; Provisional
Probab=27.66 E-value=2.9e+02 Score=21.30 Aligned_cols=61 Identities=8% Similarity=0.108 Sum_probs=33.3
Q ss_pred ceEEEEEeCCCCceEEEEEEeCCCceEEEEEccCCCCCCC---hhHHHHHHHHHHcCceEEEEcCC
Q 020932 60 KQQELVIPNKYGERLVGVLHDAESSEIVVLCHGFRSTKDD---PSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 60 ~~~~~~~~~~dg~~l~~~~~~~~~~~~vv~~hG~~~~~~~---~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
..-.+.+...+|..+... .-..+++||...+..+.... .....+.+.+.++|+.|+.+...
T Consensus 18 ~~pdf~l~d~~G~~vsL~--~~kGkvvlv~fwAswC~~C~~e~p~L~~l~~~~~~~g~~vvgv~~~ 81 (199)
T PTZ00056 18 SIYDYTVKTLEGTTVPMS--SLKNKVLMITNSASKCGLTKKHVDQMNRLHSVFNPLGLEILAFPTS 81 (199)
T ss_pred CCCceEEECCCCCEEeHH--HhCCCEEEEEEECCCCCChHHHHHHHHHHHHHHhcCceEEEEecch
Confidence 334455666667655422 21245666655544432211 22345566666779999999764
No 455
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=27.62 E-value=2.4e+02 Score=20.48 Aligned_cols=39 Identities=15% Similarity=0.223 Sum_probs=26.3
Q ss_pred CCceEEEE-EccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 82 ESSEIVVL-CHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 82 ~~~~~vv~-~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
+.+|.|++ --|..++. .-.+-++..|.+.||.|+..-+.
T Consensus 10 g~rprvlvak~GlDgHd--~gakvia~~l~d~GfeVi~~g~~ 49 (143)
T COG2185 10 GARPRVLVAKLGLDGHD--RGAKVIARALADAGFEVINLGLF 49 (143)
T ss_pred CCCceEEEeccCccccc--cchHHHHHHHHhCCceEEecCCc
Confidence 45565544 45655555 34677888899999999876654
No 456
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=27.57 E-value=92 Score=25.35 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=27.5
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 125 (319)
|-+. |=||...+..-..++..|++.|++|+.+|+--.|
T Consensus 4 iav~-~KGGVGKTT~~~nLA~~La~~G~rVLlID~Dpq~ 41 (274)
T PRK13235 4 VAIY-GKGGIGKSTTTQNTVAGLAEMGKKVMVVGCDPKA 41 (274)
T ss_pred EEEe-CCCCccHHHHHHHHHHHHHHCCCcEEEEecCCcc
Confidence 4444 5666664445678999999999999999874333
No 457
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.53 E-value=1.1e+02 Score=25.18 Aligned_cols=19 Identities=32% Similarity=0.377 Sum_probs=16.8
Q ss_pred EEEEEehhHHHHHHHHhhc
Q 020932 159 AILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 159 ~l~G~S~Gg~~a~~~a~~~ 177 (319)
.+.|.|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 7889999999999988764
No 458
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=27.27 E-value=3.6e+02 Score=22.27 Aligned_cols=83 Identities=17% Similarity=0.086 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-
Q 020932 101 SMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND- 179 (319)
Q Consensus 101 ~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~- 179 (319)
....+++.+.+.|..-+.+- .|.++....+.++..+-+..+++.. +.+-.+++|-+.+-.-++.++....+
T Consensus 22 ~l~~l~~~l~~~Gv~gi~v~-----GstGE~~~Ls~eEr~~l~~~~~~~~---~~~~pvi~gv~~~t~~~i~~a~~a~~~ 93 (289)
T cd00951 22 AYRAHVEWLLSYGAAALFAA-----GGTGEFFSLTPDEYAQVVRAAVEET---AGRVPVLAGAGYGTATAIAYAQAAEKA 93 (289)
T ss_pred HHHHHHHHHHHcCCCEEEEC-----cCCcCcccCCHHHHHHHHHHHHHHh---CCCCCEEEecCCCHHHHHHHHHHHHHh
Confidence 45778888888898766643 1233333444444444445555554 22222445555455556666655544
Q ss_pred -ccEEEEEecccc
Q 020932 180 -IRTFVNVSGRYD 191 (319)
Q Consensus 180 -v~~~v~~~~~~~ 191 (319)
+++++++.|.+.
T Consensus 94 Gad~v~~~pP~y~ 106 (289)
T cd00951 94 GADGILLLPPYLT 106 (289)
T ss_pred CCCEEEECCCCCC
Confidence 889888777654
No 459
>COG4213 XylF ABC-type xylose transport system, periplasmic component [Carbohydrate transport and metabolism]
Probab=26.90 E-value=2.6e+02 Score=23.46 Aligned_cols=76 Identities=18% Similarity=0.145 Sum_probs=44.9
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHH---hHHHHHHHHHHhCC---Cc
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREA---DDLRAVVQYFCGAN---RA 156 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~---~d~~~~i~~l~~~~---~~ 156 (319)
.++-+|++....+.. .....+.-.+.|..|+++|..=+.. . -.-+.+|+... -...++++.+...+ ..
T Consensus 80 qg~~vlvi~a~d~~~----l~~~i~~A~~~gikViaYDRlI~n~-d-vd~YvsFDN~~VG~lQa~~l~~~lk~k~~~~~g 153 (341)
T COG4213 80 QGVKVLVIGAIDGGV----LSNAVEKAKSEGIKVIAYDRLINNA-D-VDFYVSFDNEKVGELQAKALVKGLKLKPLTSEG 153 (341)
T ss_pred cCCCEEEEEeccchh----HHHHHHHHHHcCCeEEEeecccccC-C-ccEEEEecchhHHHHHHHHHHHHhccCCCCCCC
Confidence 455566666655544 5667777788899999999875541 1 11122333321 23345555565554 56
Q ss_pred eEEEEEEe
Q 020932 157 VGAILGHS 164 (319)
Q Consensus 157 ~i~l~G~S 164 (319)
++.++|-|
T Consensus 154 n~~l~~GS 161 (341)
T COG4213 154 NYVLLGGS 161 (341)
T ss_pred CEEEecCC
Confidence 78888777
No 460
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=26.78 E-value=1.4e+02 Score=20.81 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=19.3
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 120 (319)
.+++.||++...|..+ ...+..|...||+|..+|
T Consensus 85 ~~~~vvvyC~~~G~rs-----~~a~~~L~~~G~~v~~L~ 118 (128)
T cd01520 85 RDPKLLIYCARGGMRS-----QSLAWLLESLGIDVPLLE 118 (128)
T ss_pred CCCeEEEEeCCCCccH-----HHHHHHHHHcCCceeEeC
Confidence 3567888885323222 223355566699866554
No 461
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=26.76 E-value=90 Score=24.51 Aligned_cols=16 Identities=13% Similarity=0.302 Sum_probs=13.3
Q ss_pred HHHHHHcCceEEEEcC
Q 020932 106 AVALQNEGISAFRFDF 121 (319)
Q Consensus 106 ~~~l~~~G~~v~~~d~ 121 (319)
+..|+++|+.|+++|.
T Consensus 52 a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 52 MLWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHHhCCCeEEEEcc
Confidence 3456789999999997
No 462
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=26.73 E-value=1.1e+02 Score=26.49 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=29.7
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCC
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNG 125 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G 125 (319)
.+|.+...=||.+.+..-..++..|+..|++|+.+|+-..+
T Consensus 105 ~vI~v~n~KGGvGKTT~a~nLA~~La~~G~rVLlID~DpQ~ 145 (387)
T TIGR03453 105 QVIAVTNFKGGSGKTTTAAHLAQYLALRGYRVLAIDLDPQA 145 (387)
T ss_pred eEEEEEccCCCcCHHHHHHHHHHHHHhcCCCEEEEecCCCC
Confidence 45555556666664445678889999999999999986444
No 463
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=26.71 E-value=2.4e+02 Score=22.52 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=24.1
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
++++-|..+. .-..+++.|.++|+.|+..+...
T Consensus 11 ~vlItG~s~g----IG~~la~~l~~~G~~v~~~~~~~ 43 (266)
T PRK06171 11 IIIVTGGSSG----IGLAIVKELLANGANVVNADIHG 43 (266)
T ss_pred EEEEeCCCCh----HHHHHHHHHHHCCCEEEEEeCCc
Confidence 3455565443 45778999999999999988653
No 464
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=26.64 E-value=94 Score=26.83 Aligned_cols=18 Identities=22% Similarity=0.361 Sum_probs=16.1
Q ss_pred EEEEEehhHHHHHHHHhh
Q 020932 159 AILGHSKGGSVVLLYASK 176 (319)
Q Consensus 159 ~l~G~S~Gg~~a~~~a~~ 176 (319)
.++|-|.|+.+|..++..
T Consensus 47 ~IaGtSAGALvAAl~asG 64 (382)
T cd07219 47 RVAGTSAGSVIAALVVCG 64 (382)
T ss_pred eEEEEcHHHHHHHHHHhC
Confidence 589999999999988876
No 465
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=26.62 E-value=85 Score=26.38 Aligned_cols=34 Identities=18% Similarity=0.149 Sum_probs=23.1
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
|++++.+.+........+++.|.++||.|..+-.
T Consensus 2 ~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~ 35 (350)
T cd03785 2 ILIAGGGTGGHIFPALALAEELRERGAEVLFLGT 35 (350)
T ss_pred EEEEecCchhhhhHHHHHHHHHHhCCCEEEEEEC
Confidence 4555555544324456899999999999877643
No 466
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=26.59 E-value=23 Score=31.37 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=29.8
Q ss_pred HHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC-ccEEE
Q 020932 145 AVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND-IRTFV 184 (319)
Q Consensus 145 ~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v 184 (319)
-+++.|.+++.-+-++-|-|+||.+|..++.+..+ ++.+.
T Consensus 191 GVlrtL~e~dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 191 GVLRTLLEQDLLPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred HHHHHHHHccccchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 45566666676667899999999999999887644 55444
No 467
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=26.41 E-value=3e+02 Score=22.47 Aligned_cols=50 Identities=10% Similarity=0.104 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCce-EEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHH
Q 020932 102 MVNLAVALQNEGIS-AFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGS 168 (319)
Q Consensus 102 ~~~~~~~l~~~G~~-v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~ 168 (319)
...+.+.+.+.|.. ++.+|+| .++.+++....+ +.+.+.|.++.=+..--
T Consensus 111 ie~F~~~~~~~GvdGlivpDLP--------------~ee~~~~~~~~~---~~gi~~I~lvaPtt~~~ 161 (265)
T COG0159 111 IEKFLRRAKEAGVDGLLVPDLP--------------PEESDELLKAAE---KHGIDPIFLVAPTTPDE 161 (265)
T ss_pred HHHHHHHHHHcCCCEEEeCCCC--------------hHHHHHHHHHHH---HcCCcEEEEeCCCCCHH
Confidence 46677788888876 8899998 333444444444 44777777775444433
No 468
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=26.35 E-value=89 Score=24.43 Aligned_cols=16 Identities=13% Similarity=0.248 Sum_probs=13.6
Q ss_pred HHHHHHcCceEEEEcC
Q 020932 106 AVALQNEGISAFRFDF 121 (319)
Q Consensus 106 ~~~l~~~G~~v~~~d~ 121 (319)
+..|+++|+.|+++|.
T Consensus 49 a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 49 LAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHhCCCeEEEEeC
Confidence 4567789999999997
No 469
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=26.12 E-value=1.7e+02 Score=26.91 Aligned_cols=49 Identities=14% Similarity=0.187 Sum_probs=34.4
Q ss_pred HHhHHHHHHHHHHhCCCceEEEEEE------ehhHHHHHHHHhhcCCccEEEEEec
Q 020932 139 EADDLRAVVQYFCGANRAVGAILGH------SKGGSVVLLYASKYNDIRTFVNVSG 188 (319)
Q Consensus 139 ~~~d~~~~i~~l~~~~~~~i~l~G~------S~Gg~~a~~~a~~~p~v~~~v~~~~ 188 (319)
-++.+..+++.+... .++|+++|| |.|+.+++..-+..-+-.+.+.+.|
T Consensus 322 RaRvis~al~d~i~e-~d~VfImGHk~pDmDalGsAig~~~~A~~~~~~a~~v~dp 376 (655)
T COG3887 322 RARVISTALSDIIKE-SDNVFIMGHKFPDMDALGSAIGMQKFASMNNKEAFAVLDP 376 (655)
T ss_pred HHHHHHHHHHHHHhh-cCcEEEEccCCCChHHHHHHHHHHHHHHhcccccEEEECc
Confidence 356666666655544 668999999 7899999887665444456666665
No 470
>PRK13886 conjugal transfer protein TraL; Provisional
Probab=26.00 E-value=1.4e+02 Score=23.93 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=27.6
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
.++++.|-|+...+..-..++..|+.+|..|+++|.-
T Consensus 4 i~~i~~~KGGvGKSt~a~~la~~l~~~g~~vl~iD~D 40 (241)
T PRK13886 4 IHMVLQGKGGVGKSFIAATIAQYKASKGQKPLCIDTD 40 (241)
T ss_pred EEEEecCCCCCcHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 4555566666665455678888999999999999873
No 471
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=25.98 E-value=1.1e+02 Score=27.01 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=31.1
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
.+|.+|++-|..+..-+.....++..|..+|+.|..++.
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~~ 136 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVCA 136 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 457899999988887555567888888888999888875
No 472
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=25.71 E-value=1.9e+02 Score=25.27 Aligned_cols=103 Identities=17% Similarity=0.124 Sum_probs=57.9
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhC----CCceE
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGA----NRAVG 158 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~----~~~~i 158 (319)
....|+++.-..+-.+ .-...++.+...|.-|+-.|..++=.--...+... -..+.|+.++.+.+... ....-
T Consensus 47 ~~~~villSd~~G~~d--~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ec-vylisd~Ealsr~~Qr~a~~g~yr~P 123 (456)
T COG3946 47 PQGLVILLSDEAGIGD--QERSRADALLARGALVAPVDLGAYLAALGADDNEC-VYLISDFEALSREAQRAADLGVYRLP 123 (456)
T ss_pred cceeeEEEEcccChhh--hhcchhHHHhhcCCeeeccccchhhhccccCCCcc-eEEehhHHHHhHHHHHHhhccCcccc
Confidence 3345555544333332 12345778888889999999877633222211111 11233444433333222 33345
Q ss_pred EEEEEehhHHHHHHHHhhcCC--ccEEEEEec
Q 020932 159 AILGHSKGGSVVLLYASKYND--IRTFVNVSG 188 (319)
Q Consensus 159 ~l~G~S~Gg~~a~~~a~~~p~--v~~~v~~~~ 188 (319)
+|.|---||.++...++..|. +.+.+...+
T Consensus 124 Vl~g~g~Gg~~A~asaaqSp~atlag~Vsldp 155 (456)
T COG3946 124 VLTGPGQGGTLAYASAAQSPDATLAGAVSLDP 155 (456)
T ss_pred eEeecCCCcHHHHHHHhhChhhhhcCccCCCC
Confidence 888899999999998888776 666655543
No 473
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=25.66 E-value=1.7e+02 Score=24.99 Aligned_cols=42 Identities=24% Similarity=0.320 Sum_probs=28.4
Q ss_pred EEEEEccC--CCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC
Q 020932 86 IVVLCHGF--RSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE 128 (319)
Q Consensus 86 ~vv~~hG~--~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~ 128 (319)
+||.+-.+ |++........+++.|.++|+.+..+. ||+|...
T Consensus 57 PVIsVGNitvGGTGKTP~v~~La~~l~~~G~~~~IlS-RGYg~~~ 100 (338)
T PRK01906 57 PVVVVGNVTVGGTGKTPTVIALVDALRAAGFTPGVVS-RGYGAKI 100 (338)
T ss_pred CEEEECCccCCCCChHHHHHHHHHHHHHcCCceEEEe-cCCCCCC
Confidence 45665543 333333566778888999999876665 8888754
No 474
>PRK10818 cell division inhibitor MinD; Provisional
Probab=25.61 E-value=1.3e+02 Score=24.38 Aligned_cols=37 Identities=24% Similarity=0.375 Sum_probs=27.5
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
+|.+..+-||...+..-..++..|+..|++|+.+|+-
T Consensus 4 viav~s~KGGvGKTt~a~nlA~~la~~g~~vllvD~D 40 (270)
T PRK10818 4 IIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFD 40 (270)
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 4555555566654456678888999999999999974
No 475
>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase. Type III Iron-containing alcohol dehydrogenases (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. The ADH of hyperthermophilic archaeon Thermococcus hydrothermalis oxidizes a series of primary aliphatic and aromatic alcohols preferentially from C2 to C8 but is also active towards methanol and glycerol and stereospecific for monoterpenes. It was suggested that the type III ADHs in microorganisms are involved in acetaldehyde detoxication rather than in alcohol turnover.
Probab=25.58 E-value=4.5e+02 Score=22.82 Aligned_cols=65 Identities=15% Similarity=0.157 Sum_probs=36.6
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEE
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILG 162 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G 162 (319)
.++++.|-........+..+.+.|.+.|..+..++- -.. . .+ .+.+.+.++.+++.+.+-|+.+|
T Consensus 28 r~livtd~~~~~~~g~~~~v~~~L~~~gi~~~~f~~----v~~-~---p~----~~~v~~~~~~~~~~~~D~IIaiG 92 (383)
T cd08186 28 KVLLVTGKSAYKKSGAWDKVEPALDEHGIEYVLYNK----VTP-N---PT----VDQVDEAAKLGREFGAQAVIAIG 92 (383)
T ss_pred EEEEEcCccHHhhcChHHHHHHHHHHcCCeEEEeCC----CCC-C---CC----HHHHHHHHHHHHHcCCCEEEEeC
Confidence 345555533211113467888999888888877761 111 1 12 45566666666666666555443
No 476
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=25.40 E-value=1.1e+02 Score=25.38 Aligned_cols=37 Identities=14% Similarity=0.240 Sum_probs=26.5
Q ss_pred EccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC
Q 020932 90 CHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE 126 (319)
Q Consensus 90 ~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 126 (319)
+-|=||...+..-..++..|++.|++|+++|+--.|.
T Consensus 5 ~~gKGGVGKTTta~nLA~~La~~G~rVLlID~DpQ~n 41 (290)
T CHL00072 5 VYGKGGIGKSTTSCNISIALARRGKKVLQIGCDPKHD 41 (290)
T ss_pred EECCCCCcHHHHHHHHHHHHHHCCCeEEEEeccCCCc
Confidence 3445555543456788999999999999999854443
No 477
>COG3580 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.34 E-value=3.6e+02 Score=22.64 Aligned_cols=38 Identities=11% Similarity=0.114 Sum_probs=26.7
Q ss_pred ceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 020932 84 SEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 84 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
...||.-|.+--++ ..-..+.+.+...|+.|+..|---
T Consensus 203 ~gVvLaGrPYh~Dp--eiNhgI~e~i~~~g~~IlTedsI~ 240 (351)
T COG3580 203 KGVVLAGRPYHFDP--EINHGIPEKINSRGIPILTEDSIP 240 (351)
T ss_pred eeEEEeCCccccCc--ccccchHHHHhhcCCeeeecccch
Confidence 34555556664444 345778899999999999998654
No 478
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=25.27 E-value=1.4e+02 Score=26.00 Aligned_cols=42 Identities=14% Similarity=0.147 Sum_probs=29.3
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC-CCCCC
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF-AGNGE 126 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~-~G~G~ 126 (319)
.+|.+...=||.+.+..-..++..|+..|++|+++|+ -..|.
T Consensus 107 ~vIai~n~KGGVGKTT~a~nLA~~LA~~G~rVLlID~~DpQ~n 149 (388)
T PRK13705 107 PVIGVAAHKGGVYKTSVSVHLAQDLALKGLRVLLVEGNDPQGT 149 (388)
T ss_pred eEEEEECCCCCchHHHHHHHHHHHHHhcCCCeEEEcCCCCCCc
Confidence 3444555556655434567888999999999999995 55554
No 479
>COG3596 Predicted GTPase [General function prediction only]
Probab=25.23 E-value=3.9e+02 Score=22.11 Aligned_cols=19 Identities=21% Similarity=0.445 Sum_probs=14.6
Q ss_pred cCceEEEEcCCCCCCCCCC
Q 020932 112 EGISAFRFDFAGNGESEGS 130 (319)
Q Consensus 112 ~G~~v~~~d~~G~G~s~~~ 130 (319)
.|.....+|.||.|++...
T Consensus 85 ~~~~l~lwDtPG~gdg~~~ 103 (296)
T COG3596 85 DGENLVLWDTPGLGDGKDK 103 (296)
T ss_pred cccceEEecCCCcccchhh
Confidence 3566888999999987643
No 480
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=25.21 E-value=1.7e+02 Score=24.30 Aligned_cols=37 Identities=19% Similarity=0.115 Sum_probs=26.2
Q ss_pred CceEEEEEccCCCCCCCh---hHHHHHHHHHHcCceEEEE
Q 020932 83 SSEIVVLCHGFRSTKDDP---SMVNLAVALQNEGISAFRF 119 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~---~~~~~~~~l~~~G~~v~~~ 119 (319)
+++.|++.||.......| .|..+++.|.++|+.++..
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~ 217 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLP 217 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEe
Confidence 467888888866544333 5678888888778887654
No 481
>PRK14338 (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Probab=25.03 E-value=5e+02 Score=23.25 Aligned_cols=93 Identities=13% Similarity=0.039 Sum_probs=49.3
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCCCC-CCCCCh-HHHHhHHHHH---HHHHHhCCCceEEEEE
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESEGS-FQYGNY-WREADDLRAV---VQYFCGANRAVGAILG 162 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~-~~~~~~-~~~~~d~~~~---i~~l~~~~~~~i~l~G 162 (319)
++++-+|+......-..+...|.+.||.+.-- +- ..+-- -...++ +...+.+... +..+++.++...++++
T Consensus 23 ~~i~t~GC~~N~~dse~~~~~l~~~G~~~~~~--~~--~AD~~iiNTC~v~~~a~~~~~~~i~~~~~~k~~~p~~~ivv~ 98 (459)
T PRK14338 23 YYVWTVGCQMNVSDSERLEAALQGVGYSPAER--PE--DADFIVLNSCSVRASAEERILGKLGELQRLKRQRPDTRIVLW 98 (459)
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHCcCEECCC--cc--cCCEEEEeccceeeHHHHHHHHHHHHHHHHHhhCCCCEEEEe
Confidence 67778888775445577888898899865421 10 01100 001111 1222333333 3434444445557777
Q ss_pred EehhHHHHHHH-HhhcCCccEEE
Q 020932 163 HSKGGSVVLLY-ASKYNDIRTFV 184 (319)
Q Consensus 163 ~S~Gg~~a~~~-a~~~p~v~~~v 184 (319)
-++.....-.+ ....|+++.++
T Consensus 99 GC~a~~~~~~~~~~~~p~vd~v~ 121 (459)
T PRK14338 99 GCMVGPNNQSIFAERLPMVDHFV 121 (459)
T ss_pred CCccccChhHhhHhcCCCCcEEE
Confidence 77777666555 45566666555
No 482
>PRK05541 adenylylsulfate kinase; Provisional
Probab=25.02 E-value=1.1e+02 Score=22.71 Aligned_cols=38 Identities=13% Similarity=0.118 Sum_probs=27.2
Q ss_pred CceEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 020932 83 SSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 83 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 120 (319)
..|.+|++-|..++..+.....++..|...+..++.+|
T Consensus 5 ~~~~~I~i~G~~GsGKst~a~~l~~~l~~~~~~~~~~~ 42 (176)
T PRK05541 5 PNGYVIWITGLAGSGKTTIAKALYERLKLKYSNVIYLD 42 (176)
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEEe
Confidence 45678888999888755556677777776666666665
No 483
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=24.94 E-value=1.3e+02 Score=19.78 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=18.1
Q ss_pred CCceEEEEEccCCCCCCChhHHHHHHHHHHcCceE
Q 020932 82 ESSEIVVLCHGFRSTKDDPSMVNLAVALQNEGISA 116 (319)
Q Consensus 82 ~~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v 116 (319)
..++.||++++... -...+..|.+.||.+
T Consensus 60 ~~~~ivv~C~~G~r------s~~aa~~L~~~G~~~ 88 (100)
T cd01523 60 DDQEVTVICAKEGS------SQFVAELLAERGYDV 88 (100)
T ss_pred CCCeEEEEcCCCCc------HHHHHHHHHHcCcee
Confidence 35666776653321 244677888899983
No 484
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=24.90 E-value=3.1e+02 Score=24.87 Aligned_cols=19 Identities=32% Similarity=0.454 Sum_probs=15.4
Q ss_pred EEEEEehhHHHHHHHHhhc
Q 020932 159 AILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 159 ~l~G~S~Gg~~a~~~a~~~ 177 (319)
.+-|.|-||++|+.+....
T Consensus 453 ~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 453 LICGVSTGGILAIALGVKL 471 (763)
T ss_pred HHhccCchHHHHHHHHhcC
Confidence 4669999999999876653
No 485
>COG3562 KpsS Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]
Probab=24.78 E-value=4.4e+02 Score=22.51 Aligned_cols=78 Identities=22% Similarity=0.276 Sum_probs=50.1
Q ss_pred eEEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCCCC-CC-CCCCChHHHHhHHHHHHHHHHhC-CCceEEEE
Q 020932 85 EIVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGESE-GS-FQYGNYWREADDLRAVVQYFCGA-NRAVGAIL 161 (319)
Q Consensus 85 ~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~-~~-~~~~~~~~~~~d~~~~i~~l~~~-~~~~i~l~ 161 (319)
..++++-|=-+ .++..++..|...|-.|+.+++-+ |++- .+ .....+.+..++..+.++.+..+ .++.++++
T Consensus 14 ~NflllQGPvg----~ff~~la~~le~~~~~v~k~NfN~-GD~~fyp~~~t~~~~~~~D~~~~~~r~f~~~hsi~aivlf 88 (403)
T COG3562 14 ENFLLLQGPVG----PFFQELASWLELNGKRVFKINFNA-GDSTFYPQAGTVVYNDNLDDFPTFLRKFIAQHSIDAIVLF 88 (403)
T ss_pred cceEeeeCCcc----hHHHHHHHHHHhcCceEEEEeecC-CCceeeecCCccccccchhHHHHHHHHHHHhccCCceEEe
Confidence 56788877655 468999999999999999999853 3332 11 12223334455555666554444 67778888
Q ss_pred EEehhH
Q 020932 162 GHSKGG 167 (319)
Q Consensus 162 G~S~Gg 167 (319)
|-.--=
T Consensus 89 gd~R~y 94 (403)
T COG3562 89 GDTRLY 94 (403)
T ss_pred ccchHH
Confidence 876543
No 486
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=24.63 E-value=1.8e+02 Score=25.38 Aligned_cols=41 Identities=15% Similarity=0.097 Sum_probs=28.5
Q ss_pred EEEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC-CCCCC
Q 020932 86 IVVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF-AGNGE 126 (319)
Q Consensus 86 ~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~-~G~G~ 126 (319)
+|.+...=||.+.+..-..++..|+.+|++|+++|+ -..|.
T Consensus 108 vIav~n~KGGVGKTTta~nLA~~LA~~G~rVLlIDl~DpQ~n 149 (387)
T PHA02519 108 VLAVMSHKGGVYKTSSAVHTAQWLALQGHRVLLIEGNDPQGT 149 (387)
T ss_pred EEEEecCCCCCcHHHHHHHHHHHHHhCCCcEEEEeCCCCCCC
Confidence 334444445555434567889999999999999995 65554
No 487
>PLN03019 carbonic anhydrase
Probab=24.55 E-value=1.5e+02 Score=25.02 Aligned_cols=30 Identities=20% Similarity=0.228 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHhCCCceEEEEEEehhHHHHHHH
Q 020932 141 DDLRAVVQYFCGANRAVGAILGHSKGGSVVLLY 173 (319)
Q Consensus 141 ~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~ 173 (319)
..+.-++..+ +.+.|+|+|||-=|.+...+
T Consensus 203 aSIEYAV~~L---~V~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 203 AAIEYAVLHL---KVENIVVIGHSACGGIKGLM 232 (330)
T ss_pred hhHHHHHHHh---CCCEEEEecCCCchHHHHHH
Confidence 3344444545 78889999999877665543
No 488
>cd02038 FleN-like FleN is a member of the Fer4_NifH superfamily. It shares the common function as an ATPase, with the ATP-binding domain at the N-terminus. In Pseudomonas aeruginosa, FleN gene is involved in regulating the number of flagella and chemotactic motility by influencing FleQ activity.
Probab=24.42 E-value=1.7e+02 Score=20.78 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=26.9
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFAG 123 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 123 (319)
|.+..+-|+...+..-..++..++.+|.+|+.+|.-.
T Consensus 2 i~~~~~kgg~gkt~~~~~~a~~~~~~~~~~~~vd~D~ 38 (139)
T cd02038 2 IAVTSGKGGVGKTNISANLALALAKLGKRVLLLDADL 38 (139)
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 4455666666544456788889999999999999753
No 489
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=24.39 E-value=3.5e+02 Score=21.15 Aligned_cols=32 Identities=22% Similarity=0.112 Sum_probs=23.9
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
+..+.|.+.. .-+.++..|+++|++|++.|+.
T Consensus 16 ~~~vtGg~sG----IGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 16 VAAVTGGSSG----IGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred eeEEecCCch----HHHHHHHHHHhcCcEEEEeecc
Confidence 4445554443 3678899999999999999875
No 490
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=24.36 E-value=2.7e+02 Score=20.58 Aligned_cols=50 Identities=14% Similarity=0.185 Sum_probs=32.4
Q ss_pred CceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceE-EEEEEehhHHHHHHHHh
Q 020932 113 GISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVG-AILGHSKGGSVVLLYAS 175 (319)
Q Consensus 113 G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i-~l~G~S~Gg~~a~~~a~ 175 (319)
|-.|+++|.+|--.| .+.+...++.+...+ .++ +++|-|.|=.-++...+
T Consensus 67 ~~~vi~Ld~~Gk~~s------------Se~fA~~l~~~~~~G-~~i~f~IGG~~Gl~~~~~~~a 117 (155)
T COG1576 67 GSYVVLLDIRGKALS------------SEEFADFLERLRDDG-RDISFLIGGADGLSEAVKARA 117 (155)
T ss_pred CCeEEEEecCCCcCC------------hHHHHHHHHHHHhcC-CeEEEEEeCcccCCHHHHHHH
Confidence 567999999874322 244555666665556 444 78899998766665433
No 491
>PRK08339 short chain dehydrogenase; Provisional
Probab=24.27 E-value=3.8e+02 Score=21.51 Aligned_cols=31 Identities=10% Similarity=0.064 Sum_probs=23.0
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDF 121 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 121 (319)
++++-|..+. .-..+++.|+++|++|+..+.
T Consensus 10 ~~lItGas~g----IG~aia~~l~~~G~~V~~~~r 40 (263)
T PRK08339 10 LAFTTASSKG----IGFGVARVLARAGADVILLSR 40 (263)
T ss_pred EEEEeCCCCc----HHHHHHHHHHHCCCEEEEEeC
Confidence 4555665543 357889999999999998875
No 492
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=24.24 E-value=1.7e+02 Score=23.71 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=26.9
Q ss_pred cCCCCCCChhHHHHHHHHHHcCceEEEEcCCCCCC
Q 020932 92 GFRSTKDDPSMVNLAVALQNEGISAFRFDFAGNGE 126 (319)
Q Consensus 92 G~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~ 126 (319)
|=||...+..-..++..|+.+|++|+.+|+--.|.
T Consensus 9 ~KGGVGKTT~~~nLA~~la~~G~kVLliD~Dpq~~ 43 (270)
T PRK13185 9 GKGGIGKSTTSSNLSAAFAKLGKKVLQIGCDPKHD 43 (270)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCeEEEEeccCCcc
Confidence 56666644556889999999999999999865443
No 493
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=24.23 E-value=4e+02 Score=21.81 Aligned_cols=31 Identities=23% Similarity=0.142 Sum_probs=23.6
Q ss_pred EEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 88 VLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 88 v~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
+++-|..+. .-..+++.|+++||+++.+..+
T Consensus 9 ~lITGASsG----IG~~~A~~lA~~g~~liLvaR~ 39 (265)
T COG0300 9 ALITGASSG----IGAELAKQLARRGYNLILVARR 39 (265)
T ss_pred EEEECCCch----HHHHHHHHHHHCCCEEEEEeCc
Confidence 444555443 4678999999999999999875
No 494
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning]
Probab=24.19 E-value=1.4e+02 Score=23.97 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=23.3
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHc-CceEEEEcC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNE-GISAFRFDF 121 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~ 121 (319)
.|.+.|=|++..+..-.-++..|.++ ||+|+++|-
T Consensus 2 kIaI~GKGG~GKTtiaalll~~l~~~~~~~VLvVDa 37 (255)
T COG3640 2 KIAITGKGGVGKTTIAALLLKRLLSKGGYNVLVVDA 37 (255)
T ss_pred eEEEecCCCccHHHHHHHHHHHHHhcCCceEEEEeC
Confidence 46677877777543333336666666 599999985
No 495
>PRK09072 short chain dehydrogenase; Provisional
Probab=24.06 E-value=1.4e+02 Score=23.96 Aligned_cols=32 Identities=25% Similarity=0.119 Sum_probs=23.8
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEcCC
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFDFA 122 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 122 (319)
.+++.|..+. .-..+++.|.++|+.|++.+..
T Consensus 7 ~vlItG~s~~----iG~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 7 RVLLTGASGG----IGQALAEALAAAGARLLLVGRN 38 (263)
T ss_pred EEEEECCCch----HHHHHHHHHHHCCCEEEEEECC
Confidence 3555565543 4678899999999999999853
No 496
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=24.02 E-value=4.2e+02 Score=21.95 Aligned_cols=84 Identities=12% Similarity=-0.033 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCCCCCCCCCCCCChHHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCC
Q 020932 100 PSMVNLAVALQNEGISAFRFDFAGNGESEGSFQYGNYWREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYND 179 (319)
Q Consensus 100 ~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~ 179 (319)
..+..+++.+.+.|.+-+.+- .|.++....+.++..+-+..+++.. +.+-.+++|-+..-.-++.++....+
T Consensus 26 ~~l~~li~~l~~~Gv~gi~v~-----GstGE~~~Lt~eEr~~v~~~~~~~~---~g~~pvi~gv~~~t~~ai~~a~~a~~ 97 (296)
T TIGR03249 26 AAYRENIEWLLGYGLEALFAA-----GGTGEFFSLTPAEYEQVVEIAVSTA---KGKVPVYTGVGGNTSDAIEIARLAEK 97 (296)
T ss_pred HHHHHHHHHHHhcCCCEEEEC-----CCCcCcccCCHHHHHHHHHHHHHHh---CCCCcEEEecCccHHHHHHHHHHHHH
Confidence 346888899999998866643 1233333344344444444455544 22223555554333445555555444
Q ss_pred --ccEEEEEecccc
Q 020932 180 --IRTFVNVSGRYD 191 (319)
Q Consensus 180 --v~~~v~~~~~~~ 191 (319)
+++++++.|.+.
T Consensus 98 ~Gadav~~~pP~y~ 111 (296)
T TIGR03249 98 AGADGYLLLPPYLI 111 (296)
T ss_pred hCCCEEEECCCCCC
Confidence 888888777654
No 497
>cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS). The end-product PAPS is a biologically "activated" sulfate form important for the assimilation of inorganic sulfate.
Probab=24.00 E-value=1e+02 Score=22.37 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=24.0
Q ss_pred EEEEccCCCCCCChhHHHHHHHHHHcCceEEEEc
Q 020932 87 VVLCHGFRSTKDDPSMVNLAVALQNEGISAFRFD 120 (319)
Q Consensus 87 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d 120 (319)
||++-|..++..+..-+.++..+...|+.++.+|
T Consensus 1 ~i~i~G~~GsGKSTla~~L~~~l~~~g~~~~~i~ 34 (149)
T cd02027 1 VIWLTGLSGSGKSTIARALEEKLFQRGRPVYVLD 34 (149)
T ss_pred CEEEEcCCCCCHHHHHHHHHHHHHHcCCCEEEEc
Confidence 4667788887755556677777776777777775
No 498
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=23.89 E-value=1e+02 Score=28.15 Aligned_cols=25 Identities=20% Similarity=0.121 Sum_probs=20.9
Q ss_pred CCCceEEEEEEehhHHHHHHHHhhc
Q 020932 153 ANRAVGAILGHSKGGSVVLLYASKY 177 (319)
Q Consensus 153 ~~~~~i~l~G~S~Gg~~a~~~a~~~ 177 (319)
.+.++-.++|||+|=+.|+..|.-.
T Consensus 262 ~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 262 FAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred cCCCCCEEeecCHHHHHHHHHhCCC
Confidence 4777889999999999988877654
No 499
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=23.81 E-value=4.1e+02 Score=21.78 Aligned_cols=49 Identities=18% Similarity=0.064 Sum_probs=34.0
Q ss_pred HHHHhHHHHHHHHHHhCCCceEEEEEEehhHHHHHHHHhhcCCccEEEEE
Q 020932 137 WREADDLRAVVQYFCGANRAVGAILGHSKGGSVVLLYASKYNDIRTFVNV 186 (319)
Q Consensus 137 ~~~~~d~~~~i~~l~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~v~~~v~~ 186 (319)
.+..+.+.+.++.+++++.+-|+++.|. |--.-..+|.+.|+|+.++.-
T Consensus 165 ~d~~~~~~~~v~~lr~~~~D~II~l~H~-G~~~d~~la~~~~giD~Iigg 213 (281)
T cd07409 165 LDEIEAAQKEADKLKAQGVNKIIALSHS-GYEVDKEIARKVPGVDVIVGG 213 (281)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEEecc-CchhHHHHHHcCCCCcEEEeC
Confidence 3445667788888887777778888887 444455667777778876643
No 500
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=23.61 E-value=2.8e+02 Score=19.86 Aligned_cols=25 Identities=24% Similarity=0.167 Sum_probs=18.7
Q ss_pred hhHHHHHHHHHHcCceEEEEcCCCC
Q 020932 100 PSMVNLAVALQNEGISAFRFDFAGN 124 (319)
Q Consensus 100 ~~~~~~~~~l~~~G~~v~~~d~~G~ 124 (319)
.....+++.|.++|+.|..+-...-
T Consensus 16 ~~~~~l~~~l~~~G~~v~v~~~~~~ 40 (177)
T PF13439_consen 16 RVVLNLARALAKRGHEVTVVSPGVK 40 (177)
T ss_dssp HHHHHHHHHHHHTT-EEEEEESS-T
T ss_pred HHHHHHHHHHHHCCCEEEEEEcCCC
Confidence 5678899999999999888855433
Done!