Query 020933
Match_columns 319
No_of_seqs 399 out of 3106
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 10:19:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020933.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020933hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 3.7E-53 1.3E-57 390.3 22.1 237 48-289 8-247 (294)
2 1xj5_A Spermidine synthase 1; 100.0 7.7E-46 2.6E-50 349.7 28.1 276 10-288 7-284 (334)
3 3c6k_A Spermine synthase; sper 100.0 3E-45 1E-49 347.0 24.1 241 42-289 122-380 (381)
4 3adn_A Spermidine synthase; am 100.0 7.3E-45 2.5E-49 337.5 19.9 237 49-290 9-248 (294)
5 2i7c_A Spermidine synthase; tr 100.0 1.7E-43 6E-48 326.5 28.5 236 50-287 2-239 (283)
6 2o07_A Spermidine synthase; st 100.0 2.6E-43 8.7E-48 328.6 24.4 243 43-287 12-256 (304)
7 1iy9_A Spermidine synthase; ro 100.0 5.2E-43 1.8E-47 322.1 26.0 237 51-291 2-240 (275)
8 2b2c_A Spermidine synthase; be 100.0 1.1E-42 3.6E-47 325.7 24.7 238 48-287 3-269 (314)
9 2qfm_A Spermine synthase; sper 100.0 1.7E-42 5.7E-47 327.1 25.8 241 40-287 103-361 (364)
10 1inl_A Spermidine synthase; be 100.0 1.6E-42 5.6E-47 322.0 24.9 245 43-291 9-256 (296)
11 2pt6_A Spermidine synthase; tr 100.0 5.2E-42 1.8E-46 322.0 28.1 248 49-298 39-288 (321)
12 3bwc_A Spermidine synthase; SA 100.0 3E-41 1E-45 314.5 26.0 241 46-287 12-258 (304)
13 1uir_A Polyamine aminopropyltr 100.0 4.2E-40 1.4E-44 308.1 25.4 236 51-291 4-246 (314)
14 1mjf_A Spermidine synthase; sp 100.0 2.6E-39 9E-44 298.2 25.1 229 51-287 2-239 (281)
15 2cmg_A Spermidine synthase; tr 100.0 5.5E-39 1.9E-43 293.4 16.8 218 52-291 1-220 (262)
16 3gjy_A Spermidine synthase; AP 100.0 5.3E-34 1.8E-38 265.9 17.8 228 82-315 32-281 (317)
17 3orh_A Guanidinoacetate N-meth 99.6 1.6E-15 5.3E-20 135.5 13.5 122 110-240 47-169 (236)
18 3p9n_A Possible methyltransfer 99.6 6E-15 2E-19 126.6 13.3 110 125-242 43-154 (189)
19 3dxy_A TRNA (guanine-N(7)-)-me 99.6 9.3E-15 3.2E-19 129.2 14.2 127 126-260 34-165 (218)
20 3dr5_A Putative O-methyltransf 99.6 8.3E-15 2.8E-19 129.7 13.3 104 128-240 58-162 (221)
21 2fca_A TRNA (guanine-N(7)-)-me 99.6 1.9E-14 6.3E-19 126.5 14.3 127 126-260 38-168 (213)
22 2ozv_A Hypothetical protein AT 99.6 2.1E-14 7.3E-19 130.0 15.0 130 125-262 35-186 (260)
23 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.5E-14 5.3E-19 126.5 13.5 113 126-242 41-157 (214)
24 3ntv_A MW1564 protein; rossman 99.6 3.3E-14 1.1E-18 126.3 15.5 104 126-240 71-175 (232)
25 4gek_A TRNA (CMO5U34)-methyltr 99.6 1.4E-14 4.9E-19 131.5 11.9 108 124-240 68-177 (261)
26 3tfw_A Putative O-methyltransf 99.6 4.4E-14 1.5E-18 126.9 14.5 106 126-241 63-170 (248)
27 3c3y_A Pfomt, O-methyltransfer 99.6 2.8E-14 9.6E-19 127.4 13.1 107 125-241 69-181 (237)
28 1sui_A Caffeoyl-COA O-methyltr 99.6 3E-14 1E-18 128.1 13.3 106 125-240 78-189 (247)
29 1xdz_A Methyltransferase GIDB; 99.6 9E-14 3.1E-18 123.9 15.7 121 126-260 70-191 (240)
30 3duw_A OMT, O-methyltransferas 99.5 3.6E-14 1.2E-18 124.6 13.0 106 126-241 58-167 (223)
31 1dus_A MJ0882; hypothetical pr 99.5 1.7E-13 5.8E-18 116.4 16.6 125 125-263 51-175 (194)
32 3c3p_A Methyltransferase; NP_9 99.5 3.9E-14 1.3E-18 123.5 11.7 103 126-240 56-159 (210)
33 3lpm_A Putative methyltransfer 99.5 1.2E-13 4.3E-18 124.5 14.9 126 126-260 49-190 (259)
34 4hg2_A Methyltransferase type 99.5 1.7E-14 6E-19 130.7 8.9 115 125-258 38-152 (257)
35 1zx0_A Guanidinoacetate N-meth 99.5 4.5E-14 1.6E-18 125.4 11.4 110 125-240 59-169 (236)
36 3ckk_A TRNA (guanine-N(7)-)-me 99.5 5.7E-14 2E-18 125.5 12.1 130 126-259 46-182 (235)
37 2igt_A SAM dependent methyltra 99.5 1.6E-13 5.5E-18 128.8 15.5 148 126-277 153-309 (332)
38 3g89_A Ribosomal RNA small sub 99.5 1.9E-13 6.5E-18 123.2 15.4 148 125-287 79-229 (249)
39 3e05_A Precorrin-6Y C5,15-meth 99.5 1.2E-13 4.1E-18 119.7 13.5 120 125-261 39-158 (204)
40 3fpf_A Mtnas, putative unchara 99.5 3.3E-14 1.1E-18 131.0 10.3 103 123-241 119-222 (298)
41 3mti_A RRNA methylase; SAM-dep 99.5 2.6E-13 8.8E-18 115.5 14.4 110 125-241 21-135 (185)
42 3hm2_A Precorrin-6Y C5,15-meth 99.5 2.5E-13 8.5E-18 114.4 13.7 105 125-242 24-128 (178)
43 2ift_A Putative methylase HI07 99.5 5.3E-14 1.8E-18 122.4 9.3 110 126-243 53-165 (201)
44 3r3h_A O-methyltransferase, SA 99.5 6E-14 2E-18 125.8 9.7 105 126-240 60-169 (242)
45 3u81_A Catechol O-methyltransf 99.5 1.1E-13 3.7E-18 121.8 10.9 108 126-241 58-170 (221)
46 3tr6_A O-methyltransferase; ce 99.5 5.8E-14 2E-18 123.3 9.0 106 126-241 64-174 (225)
47 2esr_A Methyltransferase; stru 99.5 5.4E-14 1.8E-18 119.0 7.9 109 125-243 30-140 (177)
48 4dzr_A Protein-(glutamine-N5) 99.5 7.1E-14 2.4E-18 120.9 8.8 131 125-262 29-184 (215)
49 3njr_A Precorrin-6Y methylase; 99.5 5.5E-13 1.9E-17 116.3 14.5 117 125-261 54-170 (204)
50 3cbg_A O-methyltransferase; cy 99.5 3.2E-13 1.1E-17 120.0 12.8 106 126-241 72-182 (232)
51 2avd_A Catechol-O-methyltransf 99.5 4.1E-13 1.4E-17 118.2 12.7 105 126-240 69-178 (229)
52 2b78_A Hypothetical protein SM 99.5 4.4E-13 1.5E-17 128.3 13.7 130 125-257 211-347 (385)
53 2fhp_A Methylase, putative; al 99.5 6.1E-14 2.1E-18 119.1 6.8 109 126-243 44-156 (187)
54 3evz_A Methyltransferase; NYSG 99.5 2E-13 7E-18 120.2 10.0 127 125-261 54-196 (230)
55 3jwg_A HEN1, methyltransferase 99.5 1.3E-12 4.6E-17 114.1 15.1 110 126-241 29-141 (219)
56 2fpo_A Methylase YHHF; structu 99.5 2.3E-13 7.8E-18 118.4 10.1 106 126-242 54-161 (202)
57 1nt2_A Fibrillarin-like PRE-rR 99.5 1.7E-12 5.7E-17 113.9 15.7 105 124-241 55-161 (210)
58 3dtn_A Putative methyltransfer 99.4 6.4E-13 2.2E-17 117.2 12.9 106 125-241 43-148 (234)
59 3eey_A Putative rRNA methylase 99.4 6.7E-13 2.3E-17 114.1 12.6 113 125-241 21-139 (197)
60 2hnk_A SAM-dependent O-methylt 99.4 3.7E-13 1.3E-17 119.8 10.7 106 126-241 60-181 (239)
61 3jwh_A HEN1; methyltransferase 99.4 1E-12 3.5E-17 114.7 13.4 110 126-241 29-141 (217)
62 3mb5_A SAM-dependent methyltra 99.4 4.2E-13 1.4E-17 120.1 10.7 119 124-261 91-210 (255)
63 1g8a_A Fibrillarin-like PRE-rR 99.4 4.4E-12 1.5E-16 111.6 16.9 104 124-240 71-177 (227)
64 2b3t_A Protein methyltransfera 99.4 1E-12 3.5E-17 119.6 13.1 140 91-241 77-238 (276)
65 2vdv_E TRNA (guanine-N(7)-)-me 99.4 1E-12 3.5E-17 117.5 13.0 117 126-242 49-174 (246)
66 2gb4_A Thiopurine S-methyltran 99.4 7.2E-13 2.5E-17 119.6 11.4 109 126-239 68-189 (252)
67 1jsx_A Glucose-inhibited divis 99.4 6.4E-13 2.2E-17 115.0 10.6 102 126-242 65-166 (207)
68 1pjz_A Thiopurine S-methyltran 99.4 1.2E-13 4.3E-18 120.2 6.0 110 124-238 20-137 (203)
69 3dlc_A Putative S-adenosyl-L-m 99.4 6.1E-13 2.1E-17 115.3 10.3 106 126-241 43-148 (219)
70 1ws6_A Methyltransferase; stru 99.4 2.4E-13 8.1E-18 113.6 7.4 105 126-243 41-149 (171)
71 2frn_A Hypothetical protein PH 99.4 5.2E-13 1.8E-17 122.0 10.2 122 125-261 124-247 (278)
72 1fbn_A MJ fibrillarin homologu 99.4 9.7E-12 3.3E-16 110.0 17.9 104 124-240 72-177 (230)
73 3ofk_A Nodulation protein S; N 99.4 1.2E-12 4.1E-17 114.0 11.8 105 125-241 50-154 (216)
74 3kkz_A Uncharacterized protein 99.4 9.5E-13 3.3E-17 118.7 11.4 107 124-241 44-150 (267)
75 3hem_A Cyclopropane-fatty-acyl 99.4 1.3E-12 4.3E-17 120.2 12.2 108 125-241 71-183 (302)
76 3f4k_A Putative methyltransfer 99.4 8.6E-13 2.9E-17 117.9 10.6 106 125-241 45-150 (257)
77 4dcm_A Ribosomal RNA large sub 99.4 2.1E-12 7E-17 123.2 13.6 112 126-242 222-335 (375)
78 2gpy_A O-methyltransferase; st 99.4 4.6E-13 1.6E-17 118.5 7.9 105 126-240 54-159 (233)
79 3dli_A Methyltransferase; PSI- 99.4 2.2E-12 7.5E-17 114.5 12.2 103 125-243 40-142 (240)
80 3grz_A L11 mtase, ribosomal pr 99.4 6.9E-13 2.4E-17 114.8 8.4 101 125-241 59-159 (205)
81 1l3i_A Precorrin-6Y methyltran 99.4 3.6E-12 1.2E-16 107.9 12.7 120 125-262 32-152 (192)
82 2yxd_A Probable cobalt-precorr 99.4 1.5E-11 5.1E-16 103.4 16.1 114 125-261 34-147 (183)
83 3mgg_A Methyltransferase; NYSG 99.4 1E-12 3.6E-17 118.8 9.4 107 125-241 36-142 (276)
84 3g07_A 7SK snRNA methylphospha 99.4 8.7E-13 3E-17 121.2 9.0 115 126-241 46-220 (292)
85 1vl5_A Unknown conserved prote 99.4 1.3E-12 4.4E-17 117.3 9.8 104 125-240 36-139 (260)
86 1ve3_A Hypothetical protein PH 99.4 1.2E-12 4.1E-17 114.5 9.3 106 125-241 37-142 (227)
87 4htf_A S-adenosylmethionine-de 99.4 2E-12 6.9E-17 117.7 10.9 107 125-241 67-173 (285)
88 4dmg_A Putative uncharacterize 99.4 4.6E-12 1.6E-16 121.5 13.8 124 126-257 214-342 (393)
89 3a27_A TYW2, uncharacterized p 99.4 3.2E-12 1.1E-16 116.5 12.0 123 125-262 118-241 (272)
90 3lbf_A Protein-L-isoaspartate 99.4 2E-12 6.8E-17 112.2 10.2 101 125-243 76-176 (210)
91 3ujc_A Phosphoethanolamine N-m 99.4 1.6E-12 5.5E-17 116.2 9.9 107 124-241 53-159 (266)
92 2bm8_A Cephalosporin hydroxyla 99.4 8.1E-13 2.8E-17 118.0 7.8 100 126-241 81-187 (236)
93 2ex4_A Adrenal gland protein A 99.4 9.4E-13 3.2E-17 117.0 7.8 107 126-241 79-185 (241)
94 3ajd_A Putative methyltransfer 99.4 5.6E-12 1.9E-16 114.9 13.2 117 125-245 82-215 (274)
95 1nv8_A HEMK protein; class I a 99.4 3.1E-12 1.1E-16 117.4 11.5 151 80-242 80-250 (284)
96 3gu3_A Methyltransferase; alph 99.4 2.8E-12 9.7E-17 117.0 11.1 108 124-243 20-128 (284)
97 3g5l_A Putative S-adenosylmeth 99.4 2.8E-12 9.7E-17 114.4 10.8 103 126-242 44-146 (253)
98 3hnr_A Probable methyltransfer 99.4 2.6E-12 8.8E-17 112.1 10.3 112 112-241 34-145 (220)
99 2p7i_A Hypothetical protein; p 99.4 2.1E-12 7.3E-17 113.9 9.6 100 126-242 42-142 (250)
100 2vdw_A Vaccinia virus capping 99.3 2E-12 6.9E-17 119.7 9.7 115 125-242 47-170 (302)
101 2xvm_A Tellurite resistance pr 99.3 2.4E-12 8.3E-17 110.1 9.5 104 126-240 32-135 (199)
102 3g5t_A Trans-aconitate 3-methy 99.3 2.3E-12 8E-17 118.2 9.9 109 125-240 35-148 (299)
103 3dh0_A SAM dependent methyltra 99.3 1.5E-12 5E-17 113.6 8.0 107 125-241 36-143 (219)
104 2b25_A Hypothetical protein; s 99.3 3.1E-12 1.1E-16 119.6 10.6 123 125-260 104-234 (336)
105 3h2b_A SAM-dependent methyltra 99.3 3.8E-12 1.3E-16 109.8 10.3 100 127-241 42-141 (203)
106 4df3_A Fibrillarin-like rRNA/T 99.3 7.2E-12 2.5E-16 111.7 12.4 129 122-262 73-209 (233)
107 3e8s_A Putative SAM dependent 99.3 1.2E-11 4.2E-16 107.6 13.6 100 126-242 52-153 (227)
108 1wxx_A TT1595, hypothetical pr 99.3 4.3E-12 1.5E-16 121.1 11.6 124 126-255 209-339 (382)
109 1nkv_A Hypothetical protein YJ 99.3 2.8E-12 9.5E-17 114.5 9.6 106 125-241 35-140 (256)
110 3ou2_A SAM-dependent methyltra 99.3 4.4E-12 1.5E-16 110.0 10.4 103 125-242 45-147 (218)
111 1kpg_A CFA synthase;, cyclopro 99.3 6.7E-12 2.3E-16 114.2 11.9 105 125-241 63-168 (287)
112 3c0k_A UPF0064 protein YCCW; P 99.3 6.9E-12 2.4E-16 120.2 12.6 128 126-256 220-354 (396)
113 2as0_A Hypothetical protein PH 99.3 5.9E-12 2E-16 120.6 12.0 127 126-256 217-350 (396)
114 2p35_A Trans-aconitate 2-methy 99.3 3E-12 1E-16 114.3 9.4 102 125-242 32-133 (259)
115 1yb2_A Hypothetical protein TA 99.3 3.5E-12 1.2E-16 116.0 9.9 117 125-260 109-226 (275)
116 1xxl_A YCGJ protein; structura 99.3 6.5E-12 2.2E-16 111.5 11.0 106 124-241 19-124 (239)
117 2pwy_A TRNA (adenine-N(1)-)-me 99.3 5.7E-12 2E-16 112.5 10.7 118 125-260 95-213 (258)
118 3dmg_A Probable ribosomal RNA 99.3 4.5E-12 1.5E-16 121.1 10.4 109 126-243 233-342 (381)
119 3lcc_A Putative methyl chlorid 99.3 2.5E-12 8.6E-17 113.6 8.1 106 126-241 66-171 (235)
120 3v97_A Ribosomal RNA large sub 99.3 6E-12 2E-16 129.0 12.0 114 126-243 539-659 (703)
121 3e23_A Uncharacterized protein 99.3 1.5E-11 5.1E-16 106.7 12.6 100 125-241 42-141 (211)
122 2yqz_A Hypothetical protein TT 99.3 6.1E-12 2.1E-16 112.4 10.4 103 125-240 38-140 (263)
123 3dou_A Ribosomal RNA large sub 99.3 1.8E-11 6E-16 105.8 12.9 131 113-267 14-160 (191)
124 1o54_A SAM-dependent O-methylt 99.3 5.9E-12 2E-16 114.5 10.4 117 125-260 111-228 (277)
125 3bus_A REBM, methyltransferase 99.3 9.1E-12 3.1E-16 112.2 11.5 107 125-241 60-166 (273)
126 3k6r_A Putative transferase PH 99.3 1.3E-11 4.6E-16 112.8 12.4 101 125-240 124-224 (278)
127 3pfg_A N-methyltransferase; N, 99.3 3E-12 1E-16 115.1 8.0 101 125-240 49-150 (263)
128 2nxc_A L11 mtase, ribosomal pr 99.3 6.3E-12 2.2E-16 113.3 10.0 117 125-262 119-236 (254)
129 2pxx_A Uncharacterized protein 99.3 2.2E-12 7.4E-17 111.6 6.7 109 125-242 41-160 (215)
130 3d2l_A SAM-dependent methyltra 99.3 3.7E-12 1.3E-16 112.5 8.2 104 126-242 33-138 (243)
131 3bkw_A MLL3908 protein, S-aden 99.3 7.9E-12 2.7E-16 110.4 10.3 102 126-241 43-144 (243)
132 3m70_A Tellurite resistance pr 99.3 5.5E-12 1.9E-16 114.8 9.6 104 126-241 120-223 (286)
133 2yvl_A TRMI protein, hypotheti 99.3 1.2E-11 4E-16 109.9 11.5 118 125-262 90-207 (248)
134 1xtp_A LMAJ004091AAA; SGPP, st 99.3 6.1E-12 2.1E-16 112.0 9.6 106 125-241 92-197 (254)
135 3ggd_A SAM-dependent methyltra 99.3 7.2E-12 2.4E-16 111.3 9.9 106 125-241 55-163 (245)
136 4fsd_A Arsenic methyltransfera 99.3 4.4E-12 1.5E-16 121.0 9.1 113 125-241 82-203 (383)
137 2ipx_A RRNA 2'-O-methyltransfe 99.3 6.5E-12 2.2E-16 111.1 9.5 106 124-241 75-182 (233)
138 1ej0_A FTSJ; methyltransferase 99.3 9.5E-12 3.2E-16 103.6 10.0 120 125-263 21-154 (180)
139 2fk8_A Methoxy mycolic acid sy 99.3 1.3E-11 4.6E-16 114.0 12.0 106 125-241 89-194 (318)
140 3tma_A Methyltransferase; thum 99.3 1E-11 3.4E-16 117.1 11.3 112 125-242 202-318 (354)
141 1wzn_A SAM-dependent methyltra 99.3 4.3E-12 1.5E-16 113.1 8.2 106 125-242 40-146 (252)
142 3kr9_A SAM-dependent methyltra 99.3 1.1E-11 3.7E-16 110.0 10.7 107 125-242 14-120 (225)
143 3vc1_A Geranyl diphosphate 2-C 99.3 5.5E-12 1.9E-16 116.6 9.1 106 125-241 116-221 (312)
144 3l8d_A Methyltransferase; stru 99.3 8.9E-12 3.1E-16 110.1 10.1 102 125-241 52-153 (242)
145 2pjd_A Ribosomal RNA small sub 99.3 3.4E-12 1.1E-16 120.0 7.7 108 126-242 196-304 (343)
146 1ixk_A Methyltransferase; open 99.3 1.6E-11 5.6E-16 114.2 12.2 114 125-244 117-249 (315)
147 2qm3_A Predicted methyltransfe 99.3 7.8E-12 2.7E-16 118.9 10.2 105 126-240 172-277 (373)
148 3sm3_A SAM-dependent methyltra 99.3 1.7E-11 5.7E-16 107.5 11.4 112 125-241 29-141 (235)
149 3ocj_A Putative exported prote 99.3 3.9E-12 1.3E-16 117.2 7.6 111 124-241 116-227 (305)
150 3p2e_A 16S rRNA methylase; met 99.3 2.2E-12 7.5E-17 114.4 5.4 109 126-239 24-137 (225)
151 3ccf_A Cyclopropane-fatty-acyl 99.3 1.1E-11 3.9E-16 112.4 10.2 100 125-242 56-155 (279)
152 2p8j_A S-adenosylmethionine-de 99.3 4.4E-12 1.5E-16 109.6 7.1 119 111-241 10-128 (209)
153 3gnl_A Uncharacterized protein 99.3 1.5E-11 5E-16 110.3 10.6 106 125-241 20-125 (244)
154 1ri5_A MRNA capping enzyme; me 99.3 4.7E-12 1.6E-16 115.2 7.4 112 125-243 63-176 (298)
155 3thr_A Glycine N-methyltransfe 99.3 5.5E-12 1.9E-16 115.0 7.8 115 126-242 57-176 (293)
156 3lec_A NADB-rossmann superfami 99.3 1.2E-11 4E-16 110.1 9.6 106 125-241 20-125 (230)
157 3uwp_A Histone-lysine N-methyl 99.3 1E-11 3.5E-16 118.8 9.8 121 112-240 162-287 (438)
158 2yx1_A Hypothetical protein MJ 99.3 1.9E-11 6.4E-16 114.8 11.2 101 125-244 194-294 (336)
159 2qe6_A Uncharacterized protein 99.3 5.8E-11 2E-15 108.3 14.1 108 126-241 77-196 (274)
160 3q7e_A Protein arginine N-meth 99.3 1.1E-11 3.8E-16 116.9 9.6 108 126-241 66-173 (349)
161 2o57_A Putative sarcosine dime 99.3 8.9E-12 3.1E-16 113.9 8.7 107 125-241 81-187 (297)
162 3g2m_A PCZA361.24; SAM-depende 99.3 4.2E-12 1.4E-16 116.5 6.4 110 126-243 82-192 (299)
163 2plw_A Ribosomal RNA methyltra 99.3 2.6E-11 8.8E-16 104.3 10.9 120 125-263 21-172 (201)
164 2yxe_A Protein-L-isoaspartate 99.3 1.4E-11 4.8E-16 107.2 9.3 102 125-242 76-178 (215)
165 3r0q_C Probable protein argini 99.3 1.6E-11 5.5E-16 117.0 10.5 108 125-241 62-169 (376)
166 2fyt_A Protein arginine N-meth 99.3 2.2E-11 7.5E-16 114.5 11.3 107 125-239 63-169 (340)
167 2kw5_A SLR1183 protein; struct 99.3 1.8E-11 6.1E-16 105.4 9.8 100 129-241 32-131 (202)
168 1dl5_A Protein-L-isoaspartate 99.3 2.2E-11 7.5E-16 113.2 11.1 102 125-242 74-176 (317)
169 3cgg_A SAM-dependent methyltra 99.3 3.8E-11 1.3E-15 101.8 11.6 103 125-242 45-148 (195)
170 1i9g_A Hypothetical protein RV 99.3 1.6E-11 5.6E-16 111.2 9.9 120 125-260 98-218 (280)
171 1y8c_A S-adenosylmethionine-de 99.3 7.5E-12 2.6E-16 110.4 7.4 107 125-242 36-143 (246)
172 2pbf_A Protein-L-isoaspartate 99.3 1.7E-11 5.8E-16 107.7 9.5 105 125-241 79-193 (227)
173 3i9f_A Putative type 11 methyl 99.3 1.2E-11 4.3E-16 103.5 8.3 97 125-241 16-112 (170)
174 1o9g_A RRNA methyltransferase; 99.2 8.9E-12 3.1E-16 111.5 7.6 114 126-240 51-213 (250)
175 3gdh_A Trimethylguanosine synt 99.2 2E-12 7E-17 114.6 3.3 103 126-240 78-180 (241)
176 1wy7_A Hypothetical protein PH 99.2 2.9E-10 9.9E-15 98.2 16.8 101 125-240 48-148 (207)
177 3id6_C Fibrillarin-like rRNA/T 99.2 4.4E-11 1.5E-15 106.7 11.5 106 124-241 74-181 (232)
178 1i1n_A Protein-L-isoaspartate 99.2 1.8E-11 6.2E-16 107.4 8.9 116 112-242 64-183 (226)
179 3bxo_A N,N-dimethyltransferase 99.2 1.1E-11 3.9E-16 109.1 7.4 101 125-241 39-141 (239)
180 1r18_A Protein-L-isoaspartate( 99.2 1.5E-11 5.1E-16 108.4 8.2 106 125-242 83-195 (227)
181 3m6w_A RRNA methylase; rRNA me 99.2 4E-11 1.4E-15 117.1 11.5 114 125-244 100-232 (464)
182 1vbf_A 231AA long hypothetical 99.2 3.5E-11 1.2E-15 105.8 10.1 98 125-242 69-166 (231)
183 3m33_A Uncharacterized protein 99.2 9.2E-12 3.2E-16 109.7 6.2 93 125-239 47-140 (226)
184 1ne2_A Hypothetical protein TA 99.2 1.3E-10 4.4E-15 100.1 13.3 96 125-239 50-145 (200)
185 3dp7_A SAM-dependent methyltra 99.2 4.1E-11 1.4E-15 113.4 10.5 110 125-241 178-287 (363)
186 1jg1_A PIMT;, protein-L-isoasp 99.2 2.7E-11 9.1E-16 107.4 8.7 102 125-243 90-191 (235)
187 3q87_B N6 adenine specific DNA 99.2 4.7E-11 1.6E-15 100.8 9.8 96 126-241 23-123 (170)
188 1u2z_A Histone-lysine N-methyl 99.2 3.9E-11 1.3E-15 116.2 10.3 108 125-240 241-358 (433)
189 3bgv_A MRNA CAP guanine-N7 met 99.2 9.3E-12 3.2E-16 115.1 5.6 117 125-242 33-156 (313)
190 2y1w_A Histone-arginine methyl 99.2 2.8E-11 9.6E-16 114.0 8.8 106 126-241 50-155 (348)
191 2qy6_A UPF0209 protein YFCK; s 99.2 6E-11 2.1E-15 107.4 10.5 115 126-241 60-213 (257)
192 3fzg_A 16S rRNA methylase; met 99.2 1.6E-11 5.6E-16 105.8 6.3 114 110-240 38-151 (200)
193 2avn_A Ubiquinone/menaquinone 99.2 2.3E-11 8E-16 109.3 7.6 102 125-244 53-155 (260)
194 2gs9_A Hypothetical protein TT 99.2 3E-11 1E-15 104.7 7.9 98 126-242 36-133 (211)
195 2h00_A Methyltransferase 10 do 99.2 8.9E-12 3E-16 111.6 4.7 82 126-210 65-150 (254)
196 3m4x_A NOL1/NOP2/SUN family pr 99.2 6E-11 2.1E-15 115.6 10.7 128 125-257 104-252 (456)
197 3iv6_A Putative Zn-dependent a 99.2 6.9E-11 2.4E-15 107.2 10.3 106 124-242 43-149 (261)
198 4hc4_A Protein arginine N-meth 99.2 2.7E-11 9.3E-16 115.3 8.0 120 110-240 69-188 (376)
199 2aot_A HMT, histamine N-methyl 99.2 4.3E-11 1.5E-15 109.5 9.1 111 126-241 52-172 (292)
200 2frx_A Hypothetical protein YE 99.2 1.1E-10 3.7E-15 114.6 12.4 127 126-257 117-264 (479)
201 3cc8_A Putative methyltransfer 99.2 4.9E-11 1.7E-15 103.9 8.9 101 125-242 31-131 (230)
202 2nyu_A Putative ribosomal RNA 99.2 8.5E-11 2.9E-15 100.5 10.2 120 125-263 21-163 (196)
203 2wa2_A Non-structural protein 99.2 2.4E-11 8.3E-16 111.1 6.9 126 125-263 81-213 (276)
204 3mq2_A 16S rRNA methyltransfer 99.2 3.6E-11 1.2E-15 104.9 7.6 110 125-241 26-140 (218)
205 2yxl_A PH0851 protein, 450AA l 99.2 7.3E-11 2.5E-15 115.0 10.4 117 125-245 258-393 (450)
206 2i62_A Nicotinamide N-methyltr 99.2 9.4E-12 3.2E-16 111.3 3.7 115 126-241 56-198 (265)
207 2a14_A Indolethylamine N-methy 99.2 6.3E-12 2.2E-16 113.6 2.5 114 126-241 55-197 (263)
208 1g6q_1 HnRNP arginine N-methyl 99.2 7.6E-11 2.6E-15 110.2 9.7 107 126-240 38-144 (328)
209 2dul_A N(2),N(2)-dimethylguano 99.2 1.1E-10 3.9E-15 111.2 10.8 105 126-241 47-164 (378)
210 1sqg_A SUN protein, FMU protei 99.2 1.1E-10 3.9E-15 112.9 11.0 115 125-244 245-377 (429)
211 3axs_A Probable N(2),N(2)-dime 99.1 8.7E-11 3E-15 112.4 9.5 104 126-241 52-158 (392)
212 1p91_A Ribosomal RNA large sub 99.1 5E-11 1.7E-15 107.3 7.4 97 125-243 84-180 (269)
213 3mcz_A O-methyltransferase; ad 99.1 9.3E-11 3.2E-15 110.0 9.4 108 127-241 180-287 (352)
214 3i53_A O-methyltransferase; CO 99.1 1.4E-10 4.6E-15 108.2 10.3 106 126-241 169-274 (332)
215 3bkx_A SAM-dependent methyltra 99.1 1E-10 3.5E-15 105.4 9.2 110 125-241 42-159 (275)
216 3ege_A Putative methyltransfer 99.1 5.5E-11 1.9E-15 107.0 7.3 98 125-241 33-130 (261)
217 2oxt_A Nucleoside-2'-O-methylt 99.1 6.1E-11 2.1E-15 107.8 7.4 126 125-263 73-205 (265)
218 3gwz_A MMCR; methyltransferase 99.1 1.8E-10 6.3E-15 109.1 11.0 107 125-241 201-307 (369)
219 3hp7_A Hemolysin, putative; st 99.1 1.8E-10 6.2E-15 105.9 10.0 127 95-240 55-184 (291)
220 1qzz_A RDMB, aclacinomycin-10- 99.1 1.1E-10 3.8E-15 110.3 8.7 107 125-241 181-287 (374)
221 3sso_A Methyltransferase; macr 99.1 1.4E-10 4.6E-15 110.8 8.8 108 111-240 205-323 (419)
222 2ip2_A Probable phenazine-spec 99.1 2.2E-10 7.5E-15 106.6 9.6 104 128-241 169-272 (334)
223 3bt7_A TRNA (uracil-5-)-methyl 99.1 1.4E-09 4.8E-14 103.2 15.2 102 127-244 214-329 (369)
224 2g72_A Phenylethanolamine N-me 99.1 3.1E-11 1.1E-15 110.2 3.6 114 126-240 71-214 (289)
225 3bzb_A Uncharacterized protein 99.1 5.3E-10 1.8E-14 102.1 11.5 109 126-240 79-204 (281)
226 1x19_A CRTF-related protein; m 99.1 4.3E-10 1.5E-14 105.9 10.9 107 125-241 189-295 (359)
227 1tw3_A COMT, carminomycin 4-O- 99.1 1.8E-10 6E-15 108.4 8.2 107 125-241 182-288 (360)
228 2r3s_A Uncharacterized protein 99.1 1.4E-10 4.8E-15 107.7 7.4 108 125-241 164-271 (335)
229 2p41_A Type II methyltransfera 99.1 1.4E-10 4.8E-15 107.5 7.3 124 125-263 81-211 (305)
230 3b3j_A Histone-arginine methyl 99.1 1.5E-10 5.1E-15 113.8 6.8 106 126-241 158-263 (480)
231 2ih2_A Modification methylase 99.1 1.2E-10 4.2E-15 111.6 6.0 119 126-260 39-183 (421)
232 2f8l_A Hypothetical protein LM 99.0 1.7E-10 5.8E-15 108.3 6.5 128 126-261 130-276 (344)
233 3cvo_A Methyltransferase-like 99.0 1.2E-09 4E-14 95.3 11.2 101 126-240 30-153 (202)
234 3htx_A HEN1; HEN1, small RNA m 99.0 6.8E-10 2.3E-14 113.8 11.1 111 126-241 721-834 (950)
235 3tm4_A TRNA (guanine N2-)-meth 99.0 8.7E-10 3E-14 104.8 11.0 103 124-231 215-321 (373)
236 1uwv_A 23S rRNA (uracil-5-)-me 99.0 1.7E-09 5.8E-14 104.8 13.1 103 125-241 285-389 (433)
237 1vlm_A SAM-dependent methyltra 99.0 4.9E-10 1.7E-14 97.9 7.6 92 127-241 48-139 (219)
238 2jjq_A Uncharacterized RNA met 99.0 1.1E-09 3.9E-14 105.8 10.9 99 125-241 289-387 (425)
239 3lcv_B Sisomicin-gentamicin re 99.0 3E-10 1E-14 102.3 6.0 114 111-240 122-235 (281)
240 4a6d_A Hydroxyindole O-methylt 99.0 1.5E-09 5.1E-14 102.4 10.7 104 126-240 179-282 (353)
241 3giw_A Protein of unknown func 99.0 2.2E-09 7.5E-14 97.7 11.0 111 126-241 78-200 (277)
242 3lst_A CALO1 methyltransferase 99.0 1.3E-09 4.6E-14 102.2 9.6 104 125-241 183-286 (348)
243 1af7_A Chemotaxis receptor met 99.0 8.7E-10 3E-14 100.6 7.6 111 126-240 105-251 (274)
244 3opn_A Putative hemolysin; str 99.0 1.5E-09 5E-14 96.7 8.7 115 107-240 20-136 (232)
245 2xyq_A Putative 2'-O-methyl tr 98.9 3.1E-09 1.1E-13 97.7 10.6 127 110-262 45-189 (290)
246 3reo_A (ISO)eugenol O-methyltr 98.9 1.6E-09 5.5E-14 102.7 8.7 99 125-241 202-300 (368)
247 4e2x_A TCAB9; kijanose, tetron 98.9 4.9E-10 1.7E-14 107.6 4.9 103 125-241 106-208 (416)
248 2b9e_A NOL1/NOP2/SUN domain fa 98.9 6.2E-09 2.1E-13 96.6 12.0 115 125-244 101-237 (309)
249 1zq9_A Probable dimethyladenos 98.9 4.6E-09 1.6E-13 96.2 10.5 78 125-211 27-104 (285)
250 3p9c_A Caffeic acid O-methyltr 98.9 2.5E-09 8.5E-14 101.3 8.9 99 125-241 200-298 (364)
251 1fp1_D Isoliquiritigenin 2'-O- 98.9 1.5E-09 5.2E-14 102.8 7.2 98 125-240 208-305 (372)
252 1fp2_A Isoflavone O-methyltran 98.9 2.3E-09 7.9E-14 100.7 8.4 99 125-241 187-288 (352)
253 4azs_A Methyltransferase WBDD; 98.9 4.3E-09 1.5E-13 105.4 9.8 76 125-206 65-140 (569)
254 3ldg_A Putative uncharacterize 98.9 5.8E-09 2E-13 99.6 10.0 111 125-241 193-343 (384)
255 2zfu_A Nucleomethylin, cerebra 98.9 4.8E-09 1.6E-13 91.0 8.0 86 125-241 66-151 (215)
256 3k0b_A Predicted N6-adenine-sp 98.9 3.8E-09 1.3E-13 101.2 7.9 111 125-241 200-350 (393)
257 3ldu_A Putative methylase; str 98.9 3.1E-09 1.1E-13 101.5 7.3 110 126-241 195-344 (385)
258 2okc_A Type I restriction enzy 98.8 5.8E-09 2E-13 101.3 8.2 112 126-242 171-308 (445)
259 2h1r_A Dimethyladenosine trans 98.8 5.1E-09 1.7E-13 96.6 7.3 76 125-210 41-116 (299)
260 3gru_A Dimethyladenosine trans 98.8 1.1E-08 3.9E-13 94.2 9.6 76 125-210 49-124 (295)
261 3frh_A 16S rRNA methylase; met 98.8 5.6E-09 1.9E-13 93.1 7.1 102 125-240 104-205 (253)
262 3fut_A Dimethyladenosine trans 98.8 2.5E-08 8.6E-13 90.8 11.4 98 126-240 47-144 (271)
263 1m6y_A S-adenosyl-methyltransf 98.8 2.5E-08 8.6E-13 92.1 11.1 90 112-209 15-107 (301)
264 3ll7_A Putative methyltransfer 98.8 1.1E-08 3.7E-13 98.2 8.0 81 127-211 94-174 (410)
265 1zg3_A Isoflavanone 4'-O-methy 98.7 1.3E-08 4.3E-13 95.8 7.4 97 126-240 193-292 (358)
266 2r6z_A UPF0341 protein in RSP 98.7 6.7E-09 2.3E-13 93.9 4.8 81 126-211 83-172 (258)
267 1qam_A ERMC' methyltransferase 98.7 5.2E-08 1.8E-12 87.1 10.3 76 125-210 29-104 (244)
268 3tqs_A Ribosomal RNA small sub 98.7 4E-08 1.4E-12 88.6 9.4 77 125-210 28-106 (255)
269 2wk1_A NOVP; transferase, O-me 98.7 2.3E-08 7.7E-13 91.5 7.2 109 125-241 105-244 (282)
270 2oyr_A UPF0341 protein YHIQ; a 98.7 2E-08 6.9E-13 90.7 5.9 82 128-212 90-176 (258)
271 1yub_A Ermam, rRNA methyltrans 98.7 1.4E-09 4.9E-14 97.1 -1.7 116 112-240 18-144 (245)
272 3lkd_A Type I restriction-modi 98.7 1.6E-07 5.6E-12 93.3 12.8 117 126-245 221-362 (542)
273 4fzv_A Putative methyltransfer 98.7 1.6E-07 5.4E-12 88.8 12.0 136 124-260 146-305 (359)
274 2ar0_A M.ecoki, type I restric 98.7 6.7E-08 2.3E-12 96.2 9.9 114 126-242 169-313 (541)
275 2ld4_A Anamorsin; methyltransf 98.6 2.4E-08 8.3E-13 83.9 5.6 91 124-241 10-101 (176)
276 3khk_A Type I restriction-modi 98.6 2.4E-08 8.3E-13 99.4 5.6 115 125-243 243-397 (544)
277 3ftd_A Dimethyladenosine trans 98.6 1.9E-07 6.3E-12 83.9 10.6 98 126-241 31-131 (249)
278 3vyw_A MNMC2; tRNA wobble urid 98.6 8.5E-07 2.9E-11 81.7 14.7 144 127-287 97-260 (308)
279 2oo3_A Protein involved in cat 98.6 4.2E-07 1.4E-11 82.7 11.9 132 111-262 82-217 (283)
280 3v97_A Ribosomal RNA large sub 98.6 9.8E-08 3.4E-12 97.8 8.5 114 126-242 190-348 (703)
281 3s1s_A Restriction endonucleas 98.6 2E-07 7E-12 95.5 10.6 136 126-262 321-488 (878)
282 3evf_A RNA-directed RNA polyme 98.5 1.7E-07 5.9E-12 84.7 8.2 132 125-267 73-207 (277)
283 3gcz_A Polyprotein; flavivirus 98.4 2.3E-07 8E-12 84.0 6.4 140 110-267 77-224 (282)
284 3ua3_A Protein arginine N-meth 98.4 5.5E-07 1.9E-11 91.0 8.4 107 127-239 410-532 (745)
285 4gqb_A Protein arginine N-meth 98.4 3E-07 1E-11 92.7 6.2 103 127-238 358-464 (637)
286 3uzu_A Ribosomal RNA small sub 98.4 6.2E-07 2.1E-11 81.9 7.7 78 125-210 41-124 (279)
287 1qyr_A KSGA, high level kasuga 98.4 5.2E-07 1.8E-11 81.1 6.7 78 125-210 20-100 (252)
288 3eld_A Methyltransferase; flav 98.3 2.5E-06 8.6E-11 77.7 10.8 140 113-267 71-214 (300)
289 3r24_A NSP16, 2'-O-methyl tran 98.2 9.8E-06 3.4E-10 73.6 11.0 150 110-286 91-256 (344)
290 1wg8_A Predicted S-adenosylmet 98.2 1E-05 3.4E-10 73.6 10.8 84 113-209 12-98 (285)
291 2px2_A Genome polyprotein [con 98.0 5.5E-05 1.9E-09 67.6 12.3 140 110-267 60-206 (269)
292 3ps9_A TRNA 5-methylaminomethy 98.0 2.7E-05 9.3E-10 79.1 10.6 114 127-241 67-219 (676)
293 3p8z_A Mtase, non-structural p 97.9 7.5E-05 2.6E-09 65.9 11.5 141 109-264 64-207 (267)
294 3pvc_A TRNA 5-methylaminomethy 97.9 3.4E-05 1.2E-09 78.6 9.9 115 126-241 58-211 (689)
295 3lkz_A Non-structural protein 97.8 6.1E-05 2.1E-09 68.5 9.4 141 110-264 81-225 (321)
296 3ufb_A Type I restriction-modi 97.8 5.1E-05 1.7E-09 75.2 9.7 113 126-242 217-363 (530)
297 4auk_A Ribosomal RNA large sub 97.7 0.00011 3.6E-09 69.4 9.2 71 125-210 210-280 (375)
298 2efj_A 3,7-dimethylxanthine me 97.7 0.00013 4.4E-09 69.3 9.2 109 127-241 53-225 (384)
299 3b5i_A S-adenosyl-L-methionine 97.6 0.00013 4.4E-09 69.1 8.7 117 125-241 51-225 (374)
300 3tos_A CALS11; methyltransfera 97.6 0.00076 2.6E-08 60.5 12.1 144 125-281 68-252 (257)
301 1i4w_A Mitochondrial replicati 97.5 0.00012 4E-09 68.9 5.8 59 127-192 59-117 (353)
302 1m6e_X S-adenosyl-L-methionnin 97.5 0.0002 6.8E-09 67.4 7.3 115 124-241 49-209 (359)
303 3tka_A Ribosomal RNA small sub 97.3 0.00072 2.5E-08 62.8 9.3 75 126-208 57-136 (347)
304 1g55_A DNA cytosine methyltran 97.3 0.0031 1.1E-07 58.8 13.4 149 127-288 2-170 (343)
305 2c7p_A Modification methylase 97.2 0.008 2.7E-07 55.7 15.1 146 127-287 11-173 (327)
306 2k4m_A TR8_protein, UPF0146 pr 97.2 0.00019 6.5E-09 58.8 2.9 59 126-205 35-94 (153)
307 2zig_A TTHA0409, putative modi 97.1 0.00058 2E-08 62.3 5.9 47 125-173 234-280 (297)
308 3g7u_A Cytosine-specific methy 97.1 0.0058 2E-07 57.7 12.6 149 128-290 3-175 (376)
309 1f8f_A Benzyl alcohol dehydrog 96.9 0.0017 5.9E-08 60.8 7.2 101 124-241 188-289 (371)
310 1boo_A Protein (N-4 cytosine-s 96.8 0.0028 9.6E-08 58.6 8.2 67 178-244 11-87 (323)
311 1pl8_A Human sorbitol dehydrog 96.7 0.0048 1.6E-07 57.4 8.5 98 124-241 169-273 (356)
312 3m6i_A L-arabinitol 4-dehydrog 96.6 0.012 4E-07 54.8 11.0 100 124-241 177-283 (363)
313 4ej6_A Putative zinc-binding d 96.6 0.0039 1.3E-07 58.5 7.6 101 124-241 180-284 (370)
314 3s2e_A Zinc-containing alcohol 96.6 0.0037 1.3E-07 57.7 7.3 99 124-241 164-263 (340)
315 3fpc_A NADP-dependent alcohol 96.6 0.0031 1.1E-07 58.6 6.4 100 124-240 164-265 (352)
316 3ubt_Y Modification methylase 96.5 0.092 3.1E-06 48.0 16.1 148 129-290 2-166 (331)
317 4h0n_A DNMT2; SAH binding, tra 96.5 0.04 1.4E-06 51.1 13.5 150 128-290 4-172 (333)
318 1eg2_A Modification methylase 96.5 0.0048 1.6E-07 57.0 7.1 64 180-243 37-108 (319)
319 2zig_A TTHA0409, putative modi 96.5 0.0031 1.1E-07 57.4 5.7 65 179-243 19-99 (297)
320 1g60_A Adenine-specific methyl 96.4 0.0035 1.2E-07 56.0 5.7 61 181-241 4-74 (260)
321 3qv2_A 5-cytosine DNA methyltr 96.4 0.031 1.1E-06 51.7 12.1 151 126-288 9-181 (327)
322 2dph_A Formaldehyde dismutase; 96.4 0.0043 1.5E-07 58.7 6.2 108 125-240 184-298 (398)
323 3uko_A Alcohol dehydrogenase c 96.3 0.0069 2.3E-07 56.8 7.3 101 124-241 191-295 (378)
324 1pqw_A Polyketide synthase; ro 96.2 0.0082 2.8E-07 50.7 6.6 99 124-241 36-137 (198)
325 3jv7_A ADH-A; dehydrogenase, n 96.2 0.011 3.7E-07 54.6 7.7 97 125-241 170-270 (345)
326 4eez_A Alcohol dehydrogenase 1 96.2 0.021 7E-07 52.6 9.5 100 125-241 162-263 (348)
327 2jhf_A Alcohol dehydrogenase E 96.1 0.015 5.2E-07 54.3 8.2 97 125-241 190-293 (374)
328 4b7c_A Probable oxidoreductase 96.1 0.0077 2.6E-07 55.4 6.1 99 124-240 147-247 (336)
329 1p0f_A NADP-dependent alcohol 96.1 0.013 4.3E-07 54.9 7.6 97 125-241 190-293 (373)
330 1cdo_A Alcohol dehydrogenase; 96.1 0.013 4.3E-07 54.9 7.6 97 125-241 191-294 (374)
331 4dvj_A Putative zinc-dependent 96.0 0.018 6.1E-07 53.8 8.4 97 126-240 171-269 (363)
332 3ip1_A Alcohol dehydrogenase, 96.0 0.017 6E-07 54.6 8.4 101 125-241 212-318 (404)
333 1g60_A Adenine-specific methyl 96.0 0.0068 2.3E-07 54.0 5.2 46 125-172 211-256 (260)
334 4a2c_A Galactitol-1-phosphate 96.0 0.02 6.9E-07 52.7 8.6 101 124-241 158-260 (346)
335 1e3i_A Alcohol dehydrogenase, 96.0 0.014 4.8E-07 54.6 7.6 97 125-241 194-297 (376)
336 1e3j_A NADP(H)-dependent ketos 95.9 0.021 7E-07 52.9 8.4 99 125-241 167-271 (352)
337 2fzw_A Alcohol dehydrogenase c 95.9 0.015 5.2E-07 54.2 7.5 97 125-241 189-292 (373)
338 2b5w_A Glucose dehydrogenase; 95.9 0.024 8.2E-07 52.6 8.6 94 128-241 174-273 (357)
339 1uuf_A YAHK, zinc-type alcohol 95.9 0.038 1.3E-06 51.6 10.0 95 125-241 193-288 (369)
340 1kol_A Formaldehyde dehydrogen 95.9 0.016 5.5E-07 54.6 7.4 109 125-241 184-300 (398)
341 3me5_A Cytosine-specific methy 95.8 0.13 4.4E-06 50.1 13.6 126 127-260 88-249 (482)
342 1v3u_A Leukotriene B4 12- hydr 95.7 0.016 5.6E-07 53.1 6.8 98 125-241 144-244 (333)
343 1vj0_A Alcohol dehydrogenase, 95.7 0.015 5E-07 54.6 6.4 97 125-241 194-298 (380)
344 3uog_A Alcohol dehydrogenase; 95.6 0.038 1.3E-06 51.4 8.9 95 125-241 188-287 (363)
345 2c0c_A Zinc binding alcohol de 95.6 0.025 8.6E-07 52.7 7.5 98 125-241 162-261 (362)
346 2d8a_A PH0655, probable L-thre 95.5 0.018 6E-07 53.3 6.2 99 126-241 167-267 (348)
347 2j3h_A NADP-dependent oxidored 95.5 0.019 6.4E-07 52.9 6.2 98 125-240 154-254 (345)
348 3two_A Mannitol dehydrogenase; 95.5 0.041 1.4E-06 50.8 8.4 91 124-241 174-265 (348)
349 2dq4_A L-threonine 3-dehydroge 95.4 0.009 3.1E-07 55.2 3.8 98 126-241 164-262 (343)
350 3gms_A Putative NADPH:quinone 95.3 0.021 7E-07 52.7 5.8 99 124-241 142-243 (340)
351 1pjc_A Protein (L-alanine dehy 95.3 0.096 3.3E-06 48.9 10.5 101 126-241 166-267 (361)
352 3qwb_A Probable quinone oxidor 95.3 0.02 6.7E-07 52.6 5.7 97 125-240 147-246 (334)
353 4eye_A Probable oxidoreductase 95.3 0.027 9.3E-07 52.0 6.5 97 124-240 157-256 (342)
354 3swr_A DNA (cytosine-5)-methyl 95.3 1.1 3.7E-05 47.4 19.2 153 127-290 540-725 (1002)
355 3fbg_A Putative arginate lyase 95.2 0.039 1.3E-06 50.9 7.4 96 126-240 150-247 (346)
356 2zb4_A Prostaglandin reductase 95.2 0.029 9.9E-07 52.0 6.5 99 125-240 157-259 (357)
357 2h6e_A ADH-4, D-arabinose 1-de 95.2 0.037 1.2E-06 51.0 7.0 95 126-241 170-269 (344)
358 1rjw_A ADH-HT, alcohol dehydro 95.1 0.031 1.1E-06 51.5 6.4 98 125-241 163-261 (339)
359 2hcy_A Alcohol dehydrogenase 1 95.1 0.028 9.5E-07 51.9 5.9 99 125-241 168-269 (347)
360 3jyn_A Quinone oxidoreductase; 95.1 0.021 7.1E-07 52.3 5.0 98 125-241 139-239 (325)
361 2vhw_A Alanine dehydrogenase; 94.9 0.14 4.7E-06 48.2 10.3 100 126-240 167-267 (377)
362 3fwz_A Inner membrane protein 94.9 0.12 4.1E-06 41.0 8.5 96 127-242 7-106 (140)
363 2cf5_A Atccad5, CAD, cinnamyl 94.8 0.082 2.8E-06 49.0 8.5 95 126-241 180-275 (357)
364 4dup_A Quinone oxidoreductase; 94.8 0.028 9.6E-07 52.1 5.2 99 124-241 165-265 (353)
365 1yqd_A Sinapyl alcohol dehydro 94.8 0.14 4.7E-06 47.6 10.0 95 126-241 187-282 (366)
366 2eih_A Alcohol dehydrogenase; 94.7 0.048 1.7E-06 50.2 6.4 98 125-241 165-265 (343)
367 1jvb_A NAD(H)-dependent alcoho 94.6 0.038 1.3E-06 51.0 5.5 100 124-241 168-271 (347)
368 1wly_A CAAR, 2-haloacrylate re 94.5 0.056 1.9E-06 49.5 6.3 98 125-241 144-244 (333)
369 3gaz_A Alcohol dehydrogenase s 94.5 0.07 2.4E-06 49.2 7.0 95 124-240 148-245 (343)
370 1piw_A Hypothetical zinc-type 94.3 0.065 2.2E-06 49.7 6.5 96 125-240 178-275 (360)
371 2vz8_A Fatty acid synthase; tr 94.3 0.0086 2.9E-07 69.2 0.5 103 127-241 1241-1348(2512)
372 1iz0_A Quinone oxidoreductase; 94.3 0.11 3.7E-06 46.8 7.7 92 124-240 123-217 (302)
373 2qrv_A DNA (cytosine-5)-methyl 94.2 0.091 3.1E-06 47.8 7.1 75 126-210 15-93 (295)
374 1yb5_A Quinone oxidoreductase; 94.1 0.07 2.4E-06 49.4 6.2 98 125-241 169-269 (351)
375 1qor_A Quinone oxidoreductase; 94.1 0.053 1.8E-06 49.5 5.2 98 125-241 139-239 (327)
376 2j8z_A Quinone oxidoreductase; 94.1 0.064 2.2E-06 49.7 5.9 99 124-241 160-261 (354)
377 3goh_A Alcohol dehydrogenase, 94.1 0.046 1.6E-06 49.6 4.8 88 124-240 140-228 (315)
378 2eez_A Alanine dehydrogenase; 93.9 0.28 9.5E-06 45.8 9.9 100 126-240 165-265 (369)
379 2cdc_A Glucose dehydrogenase g 93.9 0.099 3.4E-06 48.5 6.7 93 127-241 181-278 (366)
380 3gqv_A Enoyl reductase; medium 93.8 0.17 5.9E-06 47.0 8.3 97 125-240 163-262 (371)
381 3p2y_A Alanine dehydrogenase/p 93.6 0.21 7.2E-06 47.1 8.5 108 126-240 183-301 (381)
382 3l9w_A Glutathione-regulated p 93.6 0.22 7.7E-06 47.4 8.7 95 127-241 4-102 (413)
383 1boo_A Protein (N-4 cytosine-s 93.5 0.028 9.7E-07 51.7 2.2 62 125-193 251-312 (323)
384 3nx4_A Putative oxidoreductase 93.5 0.095 3.2E-06 47.6 5.8 91 129-241 149-241 (324)
385 4dio_A NAD(P) transhydrogenase 93.1 0.36 1.2E-05 45.9 9.2 108 126-240 189-311 (405)
386 3av4_A DNA (cytosine-5)-methyl 93.1 4.1 0.00014 44.3 18.3 151 127-288 851-1034(1330)
387 3iht_A S-adenosyl-L-methionine 93.0 0.14 5E-06 42.0 5.4 103 125-239 39-145 (174)
388 1xa0_A Putative NADPH dependen 93.0 0.1 3.5E-06 47.5 5.1 93 129-241 152-246 (328)
389 4ft4_B DNA (cytosine-5)-methyl 92.9 5.2 0.00018 40.9 18.3 56 128-192 213-273 (784)
390 1id1_A Putative potassium chan 92.9 0.55 1.9E-05 37.5 8.9 100 127-243 3-107 (153)
391 2y0c_A BCEC, UDP-glucose dehyd 92.6 1.3 4.6E-05 42.7 12.8 108 126-241 7-128 (478)
392 2py6_A Methyltransferase FKBM; 92.6 0.17 5.7E-06 48.1 6.1 48 125-172 225-274 (409)
393 3ggo_A Prephenate dehydrogenas 92.5 1.2 4.1E-05 40.5 11.7 91 127-239 33-126 (314)
394 4a27_A Synaptic vesicle membra 92.4 0.12 4.2E-06 47.6 5.0 97 124-241 140-238 (349)
395 3krt_A Crotonyl COA reductase; 92.4 0.26 8.9E-06 47.2 7.4 104 125-240 227-343 (456)
396 3c85_A Putative glutathione-re 92.4 0.43 1.5E-05 39.3 7.9 97 127-242 39-140 (183)
397 1x13_A NAD(P) transhydrogenase 92.4 0.71 2.4E-05 43.7 10.3 42 126-168 171-213 (401)
398 4a0s_A Octenoyl-COA reductase/ 92.1 0.29 1E-05 46.6 7.2 99 124-241 218-336 (447)
399 2vn8_A Reticulon-4-interacting 91.8 0.34 1.2E-05 45.0 7.3 97 125-241 182-280 (375)
400 3dfz_A SIRC, precorrin-2 dehyd 91.8 0.72 2.4E-05 40.1 8.8 100 114-241 18-121 (223)
401 4dkj_A Cytosine-specific methy 91.8 1.4 4.7E-05 41.8 11.5 46 127-172 10-60 (403)
402 1l7d_A Nicotinamide nucleotide 91.6 0.49 1.7E-05 44.4 8.1 42 126-168 171-213 (384)
403 3oig_A Enoyl-[acyl-carrier-pro 91.6 2.2 7.7E-05 37.0 12.0 110 126-241 6-147 (266)
404 3gg2_A Sugar dehydrogenase, UD 91.6 3.8 0.00013 39.2 14.5 106 128-241 3-122 (450)
405 1zcj_A Peroxisomal bifunctiona 91.4 1.1 3.8E-05 43.1 10.5 103 127-243 37-152 (463)
406 3llv_A Exopolyphosphatase-rela 91.2 1.3 4.6E-05 34.5 9.3 68 127-209 6-79 (141)
407 2o3j_A UDP-glucose 6-dehydroge 91.0 3.6 0.00012 39.7 13.9 108 128-241 10-135 (481)
408 1lss_A TRK system potassium up 91.0 1.7 5.9E-05 33.4 9.7 92 128-238 5-100 (140)
409 3tqh_A Quinone oxidoreductase; 90.8 0.66 2.3E-05 42.0 7.9 92 124-240 150-244 (321)
410 2g1u_A Hypothetical protein TM 90.7 0.54 1.9E-05 37.7 6.5 100 126-243 18-120 (155)
411 3ado_A Lambda-crystallin; L-gu 90.6 0.43 1.5E-05 43.8 6.4 106 125-243 4-125 (319)
412 2aef_A Calcium-gated potassium 90.5 1.5 5E-05 37.6 9.5 95 127-243 9-107 (234)
413 3ic5_A Putative saccharopine d 90.4 1.2 4.3E-05 33.0 8.1 68 127-208 5-77 (118)
414 3o38_A Short chain dehydrogena 90.1 2.6 8.9E-05 36.6 11.1 78 126-209 21-110 (266)
415 3grk_A Enoyl-(acyl-carrier-pro 90.1 4.9 0.00017 35.7 13.0 108 126-241 30-169 (293)
416 4a7p_A UDP-glucose dehydrogena 90.0 2.1 7.2E-05 41.0 11.0 126 126-262 7-147 (446)
417 1tt7_A YHFP; alcohol dehydroge 89.9 0.13 4.5E-06 46.8 2.3 91 129-241 153-247 (330)
418 3guy_A Short-chain dehydrogena 89.6 3.5 0.00012 34.9 11.2 72 128-209 2-81 (230)
419 1rjd_A PPM1P, carboxy methyl t 89.3 1.5 5.1E-05 40.4 9.1 108 126-238 97-229 (334)
420 4e12_A Diketoreductase; oxidor 89.2 0.52 1.8E-05 42.1 5.8 103 128-243 5-123 (283)
421 1eg2_A Modification methylase 89.2 0.37 1.3E-05 44.2 4.8 47 125-173 241-290 (319)
422 1jw9_B Molybdopterin biosynthe 89.2 0.47 1.6E-05 41.8 5.3 33 127-160 31-65 (249)
423 2hwk_A Helicase NSP2; rossman 88.8 0.7 2.4E-05 41.7 6.1 64 199-267 205-277 (320)
424 1h2b_A Alcohol dehydrogenase; 88.7 0.54 1.9E-05 43.4 5.6 94 125-241 185-285 (359)
425 3ce6_A Adenosylhomocysteinase; 88.5 2.3 7.8E-05 41.4 10.1 89 125-241 272-361 (494)
426 3lyl_A 3-oxoacyl-(acyl-carrier 88.4 5.9 0.0002 33.8 11.9 78 126-209 4-91 (247)
427 3imf_A Short chain dehydrogena 88.3 3.9 0.00013 35.4 10.8 78 126-209 5-92 (257)
428 3l4b_C TRKA K+ channel protien 88.3 1.8 6.3E-05 36.6 8.4 96 129-243 2-101 (218)
429 3mog_A Probable 3-hydroxybutyr 88.3 0.87 3E-05 44.2 7.0 103 127-243 5-122 (483)
430 2uyo_A Hypothetical protein ML 88.2 1.7 5.9E-05 39.5 8.6 112 127-243 103-220 (310)
431 3eod_A Protein HNR; response r 88.1 4.6 0.00016 30.2 9.9 78 150-239 7-85 (130)
432 1zej_A HBD-9, 3-hydroxyacyl-CO 88.1 1.7 5.9E-05 39.2 8.5 98 125-243 10-109 (293)
433 4dcm_A Ribosomal RNA large sub 88.1 1.4 4.8E-05 41.1 8.1 116 126-262 38-153 (375)
434 1f0y_A HCDH, L-3-hydroxyacyl-C 88.0 1.5 5E-05 39.4 7.9 101 128-241 16-136 (302)
435 1wma_A Carbonyl reductase [NAD 88.0 4 0.00014 35.1 10.6 78 126-209 3-91 (276)
436 2dpo_A L-gulonate 3-dehydrogen 87.9 2 7E-05 39.2 8.9 103 127-242 6-124 (319)
437 4e7p_A Response regulator; DNA 87.8 4 0.00014 31.6 9.6 78 151-239 21-99 (150)
438 3pi7_A NADH oxidoreductase; gr 87.6 0.41 1.4E-05 44.0 4.0 95 128-241 166-263 (349)
439 3ijr_A Oxidoreductase, short c 87.5 5.4 0.00019 35.3 11.4 110 126-241 46-182 (291)
440 1mv8_A GMD, GDP-mannose 6-dehy 87.4 8.7 0.0003 36.3 13.4 103 129-239 2-121 (436)
441 3pxx_A Carveol dehydrogenase; 87.4 8 0.00027 33.7 12.4 110 126-241 9-153 (287)
442 3k96_A Glycerol-3-phosphate de 87.4 6.4 0.00022 36.3 12.1 100 127-241 29-133 (356)
443 3pk0_A Short-chain dehydrogena 87.3 4.5 0.00015 35.1 10.6 79 126-209 9-97 (262)
444 3zwc_A Peroxisomal bifunctiona 87.3 1.9 6.7E-05 44.0 9.2 102 128-243 317-431 (742)
445 3o26_A Salutaridine reductase; 87.2 1.3 4.4E-05 39.2 7.0 79 126-209 11-100 (311)
446 2q3e_A UDP-glucose 6-dehydroge 87.1 8.9 0.0003 36.6 13.4 106 128-239 6-129 (467)
447 3rih_A Short chain dehydrogena 87.0 2.8 9.4E-05 37.5 9.1 79 126-209 40-128 (293)
448 3f1l_A Uncharacterized oxidore 86.9 4.9 0.00017 34.6 10.5 79 126-209 11-101 (252)
449 3dqp_A Oxidoreductase YLBE; al 86.9 5.5 0.00019 33.2 10.6 67 129-210 2-73 (219)
450 4fn4_A Short chain dehydrogena 86.8 6.6 0.00023 34.5 11.3 78 126-209 6-93 (254)
451 3sju_A Keto reductase; short-c 86.7 5.7 0.0002 34.9 11.0 78 126-209 23-110 (279)
452 3h7a_A Short chain dehydrogena 86.4 4.5 0.00015 35.0 10.0 78 126-209 6-92 (252)
453 3tjr_A Short chain dehydrogena 86.4 5.3 0.00018 35.6 10.7 78 126-209 30-117 (301)
454 2rir_A Dipicolinate synthase, 86.3 6.4 0.00022 35.1 11.2 87 126-241 156-246 (300)
455 3cea_A MYO-inositol 2-dehydrog 86.2 5.5 0.00019 36.0 10.9 70 126-209 7-80 (346)
456 3d4o_A Dipicolinate synthase s 86.2 7 0.00024 34.8 11.4 87 126-241 154-244 (293)
457 3i1j_A Oxidoreductase, short c 86.2 5.4 0.00018 33.9 10.3 79 126-209 13-103 (247)
458 1dlj_A UDP-glucose dehydrogena 86.0 4 0.00014 38.3 10.1 103 129-241 2-117 (402)
459 1zkd_A DUF185; NESG, RPR58, st 86.0 0.78 2.7E-05 43.2 5.0 49 124-172 78-133 (387)
460 4e21_A 6-phosphogluconate dehy 86.0 4.2 0.00014 37.7 10.1 92 127-241 22-115 (358)
461 1lnq_A MTHK channels, potassiu 85.9 3.6 0.00012 37.3 9.5 95 127-243 115-213 (336)
462 3pqe_A L-LDH, L-lactate dehydr 85.6 10 0.00035 34.6 12.3 105 126-241 4-122 (326)
463 1zsy_A Mitochondrial 2-enoyl t 85.6 2.2 7.6E-05 39.1 8.0 96 124-240 165-269 (357)
464 3kht_A Response regulator; PSI 85.6 4.5 0.00015 30.9 8.7 69 151-229 6-75 (144)
465 3ucx_A Short chain dehydrogena 85.5 9.5 0.00032 33.0 11.7 75 126-208 10-96 (264)
466 4g65_A TRK system potassium up 85.5 2.7 9.3E-05 40.3 8.7 71 125-206 233-306 (461)
467 3ged_A Short-chain dehydrogena 85.3 11 0.00038 32.9 12.0 72 128-209 3-84 (247)
468 4fs3_A Enoyl-[acyl-carrier-pro 85.2 12 0.00042 32.3 12.3 78 126-209 5-95 (256)
469 3h8v_A Ubiquitin-like modifier 85.2 0.66 2.3E-05 42.0 4.0 33 127-160 36-70 (292)
470 3rkr_A Short chain oxidoreduct 85.1 5.8 0.0002 34.4 10.1 78 126-209 28-115 (262)
471 3kto_A Response regulator rece 85.0 4.4 0.00015 30.7 8.4 80 151-240 7-87 (136)
472 3k31_A Enoyl-(acyl-carrier-pro 85.0 8.6 0.0003 34.0 11.4 76 126-209 29-117 (296)
473 3r1i_A Short-chain type dehydr 85.0 4.7 0.00016 35.4 9.6 78 126-209 31-118 (276)
474 3lf2_A Short chain oxidoreduct 85.0 7.9 0.00027 33.5 11.0 80 126-209 7-96 (265)
475 4egf_A L-xylulose reductase; s 84.9 4.6 0.00016 35.2 9.4 79 126-209 19-107 (266)
476 4e6p_A Probable sorbitol dehyd 84.6 11 0.00038 32.4 11.7 75 126-209 7-91 (259)
477 1yb1_A 17-beta-hydroxysteroid 84.5 10 0.00035 32.9 11.5 78 126-209 30-117 (272)
478 4fc7_A Peroxisomal 2,4-dienoyl 84.5 5.9 0.0002 34.7 9.9 79 126-209 26-114 (277)
479 3svt_A Short-chain type dehydr 84.5 8.7 0.0003 33.6 11.1 81 126-209 10-100 (281)
480 3ioy_A Short-chain dehydrogena 84.4 8.7 0.0003 34.5 11.3 80 126-209 7-96 (319)
481 3is3_A 17BETA-hydroxysteroid d 84.4 12 0.0004 32.5 11.8 110 126-241 17-152 (270)
482 3trk_A Nonstructural polyprote 84.3 2.1 7.1E-05 38.2 6.5 63 199-263 210-279 (324)
483 4eso_A Putative oxidoreductase 84.2 7.6 0.00026 33.5 10.4 107 126-241 7-138 (255)
484 3tfo_A Putative 3-oxoacyl-(acy 84.2 6.5 0.00022 34.4 10.1 77 127-209 4-90 (264)
485 3t4x_A Oxidoreductase, short c 84.2 10 0.00034 32.9 11.3 78 126-209 9-94 (267)
486 1ae1_A Tropinone reductase-I; 84.2 14 0.00049 32.0 12.3 78 126-209 20-108 (273)
487 3pid_A UDP-glucose 6-dehydroge 84.1 4.6 0.00016 38.5 9.5 104 128-241 37-153 (432)
488 3t8y_A CHEB, chemotaxis respon 84.1 3.4 0.00012 32.8 7.6 95 136-240 10-105 (164)
489 3lua_A Response regulator rece 84.1 4.6 0.00016 30.7 8.1 79 151-240 5-88 (140)
490 4g81_D Putative hexonate dehyd 84.1 5.9 0.0002 34.8 9.7 78 126-209 8-95 (255)
491 3cz5_A Two-component response 83.9 6.8 0.00023 30.2 9.2 79 151-240 6-86 (153)
492 3l77_A Short-chain alcohol deh 83.9 10 0.00035 31.9 11.0 78 127-209 2-89 (235)
493 3ilh_A Two component response 83.9 5.5 0.00019 30.2 8.5 80 151-239 10-97 (146)
494 2km1_A Protein DRE2; yeast, an 83.8 0.88 3E-05 36.4 3.6 75 159-239 21-96 (136)
495 3v2h_A D-beta-hydroxybutyrate 83.7 9.3 0.00032 33.5 10.9 80 126-210 24-114 (281)
496 4ibo_A Gluconate dehydrogenase 83.6 4.9 0.00017 35.2 9.0 78 126-209 25-112 (271)
497 3h2s_A Putative NADH-flavin re 83.6 6.9 0.00024 32.5 9.6 99 129-240 2-103 (224)
498 3hv2_A Response regulator/HD d 83.6 5.5 0.00019 30.8 8.5 77 151-239 15-91 (153)
499 1zh8_A Oxidoreductase; TM0312, 83.5 6 0.0002 36.0 9.8 72 126-210 17-92 (340)
500 3d0o_A L-LDH 1, L-lactate dehy 83.4 9.7 0.00033 34.4 11.1 103 126-241 5-123 (317)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=100.00 E-value=3.7e-53 Score=390.29 Aligned_cols=237 Identities=36% Similarity=0.692 Sum_probs=217.9
Q ss_pred cccCCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhccccCCCCC
Q 020933 48 SVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNP 127 (319)
Q Consensus 48 ~~~~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~ 127 (319)
+.+.+||+++. +|..+.|+++++|++++|+||+|.|+++..+|++|+|||.+|++++||+.|||||+|+|++.+++|
T Consensus 8 ~~~~~w~e~~~---~~~~~~~~v~~vl~~~~S~yQ~i~v~~s~~~G~~L~LDg~~q~te~De~~YhE~l~h~~l~~~p~p 84 (294)
T 3o4f_A 8 AEKKQWHETLH---DQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHA 84 (294)
T ss_dssp --CEEEECCSS---SSEEEEEEESEEEEEEC---CCEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCC
T ss_pred ccccceeeecc---CCcceEEEEeeEEEeccCCCceEEEEEcCCcceEEEECCchhhccccHHHHHHHHHHHHHhhCCCC
Confidence 46678998876 677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccC-CCCCCCeEEEEcChHHHHHhCCCCCccEEEE
Q 020933 128 KKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (319)
Q Consensus 128 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~-~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~ 206 (319)
++||+||+|+|++++++++++++++|++||||++|+++|+++|+..+. .++++|++++++|+++|++.. .++||+||+
T Consensus 85 k~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~-~~~yDvIi~ 163 (294)
T 3o4f_A 85 KHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIIS 163 (294)
T ss_dssp CEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-SCCEEEEEE
T ss_pred CeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-cccCCEEEE
Confidence 999999999999999999999899999999999999999999987543 368899999999999999865 789999999
Q ss_pred cCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee--EEE
Q 020933 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL--PSC 284 (319)
Q Consensus 207 D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~--~~~ 284 (319)
|+++|.+++..|++.+||+.++++|+|||++++|+++++.+.+.+..+.++++++| ..+.++...||+||+|.| ++|
T Consensus 164 D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F-~~v~~~~~~vPty~~g~w~f~~a 242 (294)
T 3o4f_A 164 DCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYF-SDVGFYQAAIPTYYGGIMTFAWA 242 (294)
T ss_dssp SCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHC-SEEEEEEECCTTSSSSCEEEEEE
T ss_pred eCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhC-CceeeeeeeeccCCCcceeheeE
Confidence 99999999999999999999999999999999999999999999999999999999 578889999999999988 889
Q ss_pred EcCCC
Q 020933 285 SAVNS 289 (319)
Q Consensus 285 S~~~~ 289 (319)
|++..
T Consensus 243 s~~~~ 247 (294)
T 3o4f_A 243 TDNDA 247 (294)
T ss_dssp ESCTT
T ss_pred ECCCc
Confidence 98744
No 2
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=100.00 E-value=7.7e-46 Score=349.68 Aligned_cols=276 Identities=77% Similarity=1.295 Sum_probs=220.4
Q ss_pred CCCCCCCCCCcccccccccCCCccccccCCCCCCCCCCcccCCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEe
Q 020933 10 TDLPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQS 89 (319)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~ 89 (319)
.++|+||+++++.++.+. + .+.. ...+++..++++++.++||+|..++|||++++++++++|++.+|+||+|.|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~w~~e~~~~~~~~~~~~~v~~vl~~~~s~~q~I~v~~~ 83 (334)
T 1xj5_A 7 SATDLKRPREEDDNGGAA-T-METE-NGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQS 83 (334)
T ss_dssp -------------------------------------CCCCSSEEEECCTTSTTEEEEEEEEEEEEEEECSSCEEEEEEE
T ss_pred cccccccccccccccccc-c-hhcc-cCCCCCCCCCCcccccceEEEeccCCCCceEEEEeeeEEEEeecCCeEEEEEEc
Confidence 478999999976654311 1 1111 134456678899999999999998899999999999999999999999999999
Q ss_pred cCCeeEEEEcCeEeecccchhHHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhc
Q 020933 90 STYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQF 169 (319)
Q Consensus 90 ~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~ 169 (319)
..+|++|++||.+|+++++++.|++++.+++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++
T Consensus 84 ~~~g~~l~ldg~~~~~~~de~~y~e~L~~l~l~~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~ 163 (334)
T 1xj5_A 84 ATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQF 163 (334)
T ss_dssp SSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEECCEeecCcCcchHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999998888889999999999999999999987778999999999999999999
Q ss_pred cccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChH
Q 020933 170 FPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMH 249 (319)
Q Consensus 170 ~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~ 249 (319)
++..+.++.+++++++++|+.+++...++++||+|++|++++.++...++..+||+.++++|+|||+|+++++++|.+..
T Consensus 164 ~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~ 243 (334)
T 1xj5_A 164 FPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHMD 243 (334)
T ss_dssp CHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCHH
T ss_pred HHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccHH
Confidence 87532234567999999999999875435789999999998887767787899999999999999999999989999888
Q ss_pred HHHHHHHHHHhhcCCceeEeEEeecccCCCee--EEEEcCC
Q 020933 250 IIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL--PSCSAVN 288 (319)
Q Consensus 250 ~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~--~~~S~~~ 288 (319)
.+..+.+.++++|+..+.+++..+|+|+++.| ++||++.
T Consensus 244 ~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf~~as~~~ 284 (334)
T 1xj5_A 244 IIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTEG 284 (334)
T ss_dssp HHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEEEEEECSS
T ss_pred HHHHHHHHHHHhCccccceEEEeCCcccCCceEEEEcccCC
Confidence 88899999999997567777789999998877 8888864
No 3
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=100.00 E-value=3e-45 Score=346.95 Aligned_cols=241 Identities=24% Similarity=0.431 Sum_probs=203.8
Q ss_pred CCCCCCcccCCeeeccCCCCC---CceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHh
Q 020933 42 QPDCISSVIPGWFSEISPMWP---GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITH 118 (319)
Q Consensus 42 ~~~~~~~~~~~w~~~~~~~~~---g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~ 118 (319)
..+++|++++| ..++.+|| |++++|+|+++|++++|+||+|.|+++..|||+|+|||.+|++++| +.|++||+|
T Consensus 122 ~~~~~~~~~rg--~~~~~~~p~sdg~~~~y~v~~vl~~~~S~yQ~I~V~es~~~Gr~L~LDG~~Q~te~D-~~Y~e~l~h 198 (381)
T 3c6k_A 122 RVKRLPPIVRG--GAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAIMG 198 (381)
T ss_dssp CEECCCCEEES--CSSCCBCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHHTT
T ss_pred hhcccCccccC--CccCceeECCCCcEEEEEeEEEEEeCCCCCceEEEEEcCCcceEEEECCceeeeCCh-HHHHHHHHH
Confidence 46789999997 44555666 9999999999999999999999999999999999999999999999 679999999
Q ss_pred ccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCC-CC---CCCeEEEEcChHHHHH
Q 020933 119 LPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG-FE---DPRVTLHIGDGVAFLK 194 (319)
Q Consensus 119 l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~-~~---~~~v~v~~~D~~~~l~ 194 (319)
++++.+ ++++||+||+|+|+++++++++++ ++|++||||++|+++|+++|+..+.+ ++ ++|++++++|+++|++
T Consensus 199 ~~l~~~-~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~ 276 (381)
T 3c6k_A 199 SGKEDY-TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLK 276 (381)
T ss_dssp TTCCCC-TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHH
T ss_pred HHhhcC-CCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHH
Confidence 998765 579999999999999999999965 89999999999999999999876432 33 4679999999999997
Q ss_pred hC--CCCCccEEEEcCCCC------CCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCce
Q 020933 195 AV--PEGTYDAVIVDSSDP------IGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSV 266 (319)
Q Consensus 195 ~~--~~~~fDvIi~D~~~~------~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v 266 (319)
+. ..++||+||+|++++ .+++..||+++||+.++++|+|||++++|++++|.+ +.+..+.++++++|+ .+
T Consensus 277 ~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~-~~~~~i~~tl~~vF~-~v 354 (381)
T 3c6k_A 277 RYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT-EALSLYEEQLGRLYC-PV 354 (381)
T ss_dssp HHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH-HHHHHHHHHHTTSSS-CE
T ss_pred hhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcch-hHHHHHHHHHHHhCC-cc
Confidence 43 246899999998763 334567899999999999999999999999888864 667889999999995 45
Q ss_pred eE--eEEeecccCCCee-EEEEcCCC
Q 020933 267 NY--AWTTVPTYPRTFL-PSCSAVNS 289 (319)
Q Consensus 267 ~~--~~~~vP~~~~g~~-~~~S~~~~ 289 (319)
.+ +...||+|++.|. ++|||+..
T Consensus 355 ~~~~~~~~VPSy~~~W~F~~aSK~~~ 380 (381)
T 3c6k_A 355 EFSKEIVCVPSYLELWVFYTVWKKAK 380 (381)
T ss_dssp EEEEEEECCGGGSSCEEEEEEEECCC
T ss_pred eEeeEEEEecCCCCceeeeEEECCCC
Confidence 43 3468999997665 88998744
No 4
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=100.00 E-value=7.3e-45 Score=337.48 Aligned_cols=237 Identities=36% Similarity=0.684 Sum_probs=199.6
Q ss_pred ccCCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhccccCCCCCc
Q 020933 49 VIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPK 128 (319)
Q Consensus 49 ~~~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~ 128 (319)
-+.-|+++ +|||++++++++++|++++|+||+|.|+++..+|++|++||.+|++++|++.|++||+|++++.+++++
T Consensus 9 ~~~~~~~~---~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~Y~e~l~~~~l~~~~~~~ 85 (294)
T 3adn_A 9 EKKQWHET---LHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAK 85 (294)
T ss_dssp ---CEECC---SCSSEEEEECCSCEEEEC----CCCEEECCTTTCCEEEETTEEEEETTTHHHHHHHHHHHHHHHSTTCC
T ss_pred hhhccccc---cCCCceEEEEcccEEEEeECCCceEEEEEcCCcceEEEECCeEeeccCchhHHHHHHHHHHHhcCCCCC
Confidence 34569874 589999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred eeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccC-CCCCCCeEEEEcChHHHHHhCCCCCccEEEEc
Q 020933 129 KVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVD 207 (319)
Q Consensus 129 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~-~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D 207 (319)
+|||||||+|.++++++++.+..+|++||+|+.++++|+++++..+. .+++++++++++|++++++.. +++||+||+|
T Consensus 86 ~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-~~~fDvIi~D 164 (294)
T 3adn_A 86 HVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-SQTFDVIISD 164 (294)
T ss_dssp EEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-CCCEEEEEEC
T ss_pred EEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-CCCccEEEEC
Confidence 99999999999999999997788999999999999999999986532 256789999999999998754 6789999999
Q ss_pred CCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee--EEEE
Q 020933 208 SSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL--PSCS 285 (319)
Q Consensus 208 ~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~--~~~S 285 (319)
++++.++...+++.+||+.++++|+|||++++++++++.+.+.+..+.++++++| ..+.++...+|+||+|.| ++||
T Consensus 165 ~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vp~~p~g~~~f~~as 243 (294)
T 3adn_A 165 CTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYF-SDVGFYQAAIPTYYGGIMTFAWAT 243 (294)
T ss_dssp C----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHC-SEEEEEEEECTTSSSSEEEEEEEE
T ss_pred CCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHC-CCeEEEEEEecccCCCceEEEEEe
Confidence 9999888888999999999999999999999999888988899999999999999 568888889999999987 8899
Q ss_pred cCCCC
Q 020933 286 AVNSD 290 (319)
Q Consensus 286 ~~~~~ 290 (319)
++..+
T Consensus 244 ~~~~~ 248 (294)
T 3adn_A 244 DNDAL 248 (294)
T ss_dssp SCTTC
T ss_pred CCccc
Confidence 87544
No 5
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=100.00 E-value=1.7e-43 Score=326.48 Aligned_cols=236 Identities=53% Similarity=0.980 Sum_probs=216.7
Q ss_pred cCCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhccccCCCCCce
Q 020933 50 IPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKK 129 (319)
Q Consensus 50 ~~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~ 129 (319)
+++||+|.++.|||++++++++++|++.+|+||+|.|+++..+|++|++||.+|+++++++.|++|+.+++++.++++++
T Consensus 2 ~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~ 81 (283)
T 2i7c_A 2 SKKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKN 81 (283)
T ss_dssp -CCEEEECCTTSTTCCEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHTTSSSCCE
T ss_pred CceeEEEcccCCCCceEEEecccEEEEEECCCccEEEEEcCCCCEEEEECCEeeecccchhhHHHHHHHHHHhcCCCCCe
Confidence 46899999777999999999999999999999999999999999999999999999999999999999999888888999
Q ss_pred eeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCC
Q 020933 130 VLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSS 209 (319)
Q Consensus 130 VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~ 209 (319)
|||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.++++++++++++|+.+++... +++||+|++|.+
T Consensus 82 VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Ii~d~~ 160 (283)
T 2i7c_A 82 VLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYDVIIVDSS 160 (283)
T ss_dssp EEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEEEEEEECC
T ss_pred EEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC-CCCceEEEEcCC
Confidence 9999999999999999987778999999999999999999976533345789999999999998765 678999999999
Q ss_pred CCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee--EEEEcC
Q 020933 210 DPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL--PSCSAV 287 (319)
Q Consensus 210 ~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~--~~~S~~ 287 (319)
++.++...+++.+|++.++++|+|||+++++.+++|...+.+..+.+.++++| ..+.++...+|+|++|+| ++||++
T Consensus 161 ~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F-~~v~~~~~~vP~y~~g~~g~~~~s~~ 239 (283)
T 2i7c_A 161 DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLF-KKVEYANISIPTYPCGCIGILCCSKT 239 (283)
T ss_dssp CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTC-SEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHC-CceEEEEEEcCCcCCCcEEEEEEeCC
Confidence 98888888888999999999999999999999988988888999999999999 468888889999999986 888887
No 6
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=100.00 E-value=2.6e-43 Score=328.60 Aligned_cols=243 Identities=50% Similarity=0.967 Sum_probs=207.4
Q ss_pred CCCCCcccCCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhcccc
Q 020933 43 PDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLC 122 (319)
Q Consensus 43 ~~~~~~~~~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~ 122 (319)
....+.+.++||+|.+++|||++++++++++|++.+|+||+|.|+++..+|++|++||.+|+++++++.|++|+.|++++
T Consensus 12 ~~~~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~L~ldg~~~~~~~de~~y~e~l~~~~l~ 91 (304)
T 2o07_A 12 ASGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERDEFSYQEMIANLPLC 91 (304)
T ss_dssp ------CBTTEEEECCTTSTTEEEEEEEEEEEEEEECSSSEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHT
T ss_pred CCCCcccccceEEEeccCCCCceEEEEeccEEEEEECCCcEEEEEEcCCCceEEEECCEEEeecccchHHHHHHHHHHHh
Confidence 44566788999999998999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 123 SIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 123 ~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++....++++++++++++|+.+++... +++||
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-~~~fD 170 (304)
T 2o07_A 92 SHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN-QDAFD 170 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC-SSCEE
T ss_pred hCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC-CCCce
Confidence 88889999999999999999999987778999999999999999999875322344679999999999998754 67899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee-
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL- 281 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~- 281 (319)
+|++|++++..++..+++.+||+.++++|+|||+++++..++|.+....+.+.+.++++|+ .+.+++..+|+|++|.|
T Consensus 171 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~-~v~~~~~~vP~~~~g~~g 249 (304)
T 2o07_A 171 VIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFP-VVAYAYCTIPTYPSGQIG 249 (304)
T ss_dssp EEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCS-EEEEEEEECTTSGGGEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCC-CceeEEEEeccccCcceE
Confidence 9999999887776677788999999999999999999988888888888999999999994 68888889999998876
Q ss_pred -EEEEcC
Q 020933 282 -PSCSAV 287 (319)
Q Consensus 282 -~~~S~~ 287 (319)
++||++
T Consensus 250 ~~~as~~ 256 (304)
T 2o07_A 250 FMLCSKN 256 (304)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 888876
No 7
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=100.00 E-value=5.2e-43 Score=322.07 Aligned_cols=237 Identities=35% Similarity=0.725 Sum_probs=214.6
Q ss_pred CCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhccccCCCCCcee
Q 020933 51 PGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKV 130 (319)
Q Consensus 51 ~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~V 130 (319)
++||+|..+ ||++++++++++|++.+|+||+|.|+++..+|++|++||.+|++++|++.|+++|.|++++.++++++|
T Consensus 2 ~~w~~e~~~--~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~de~~y~e~l~~~~l~~~~~~~~V 79 (275)
T 1iy9_A 2 ELWYTEKQT--KNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHV 79 (275)
T ss_dssp CEEEEEEEE--TTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCCEE
T ss_pred CccEEEecC--CCcEEEEeeeeEEEEEECCCceEEEEEcCCCCEEEEECCEEeecccchhHHHHHHHHHHHhhCCCCCEE
Confidence 479999874 899999999999999999999999999999999999999999999999999999999988778889999
Q ss_pred eEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCC
Q 020933 131 LVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSD 210 (319)
Q Consensus 131 L~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~ 210 (319)
||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.++++++++++++|+++++... +++||+|++|+++
T Consensus 80 LdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-~~~fD~Ii~d~~~ 158 (275)
T 1iy9_A 80 LVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS-ENQYDVIMVDSTE 158 (275)
T ss_dssp EEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC-CSCEEEEEESCSS
T ss_pred EEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCeeEEEECCCC
Confidence 999999999999999987778999999999999999999875433456789999999999998764 6789999999999
Q ss_pred CCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee--EEEEcCC
Q 020933 211 PIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL--PSCSAVN 288 (319)
Q Consensus 211 ~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~--~~~S~~~ 288 (319)
+..++.++++.+|++.++++|+|||+++++..+++.+.+.+..+.++++++|+ .+.++...+|+|++|.| ++||++.
T Consensus 159 ~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~~~~vp~~~~g~w~~~~ask~~ 237 (275)
T 1iy9_A 159 PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFP-ITKLYTANIPTYPSGLWTFTIGSKKY 237 (275)
T ss_dssp CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCS-EEEEEEECCTTSGGGCEEEEEEESSC
T ss_pred CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCC-CeEEEEEecCcccCcceEEEEeeCCC
Confidence 88888888999999999999999999999998888888899999999999994 67788889999987766 7888874
Q ss_pred CCC
Q 020933 289 SDL 291 (319)
Q Consensus 289 ~~~ 291 (319)
.+.
T Consensus 238 ~~~ 240 (275)
T 1iy9_A 238 DPL 240 (275)
T ss_dssp CTT
T ss_pred Ccc
Confidence 444
No 8
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=100.00 E-value=1.1e-42 Score=325.71 Aligned_cols=238 Identities=52% Similarity=0.994 Sum_probs=205.1
Q ss_pred cccCCeeeccC---------------------------CCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcC
Q 020933 48 SVIPGWFSEIS---------------------------PMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDG 100 (319)
Q Consensus 48 ~~~~~w~~~~~---------------------------~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg 100 (319)
.+.+|||+|.+ ++|||++++++++++|++.+|+||+|.|+++..+|+.|++||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg 82 (314)
T 2b2c_A 3 KLHKGWFTEFSPDDLEKMNGASDEEPTKVLKSDGQEMGGAWPGQAFSLQVKKVLFHEKSKYQDVLVFESTTYGNVLVLDG 82 (314)
T ss_dssp CBCSSEEEEECSCCC-----------------------CCCTTEEEEEEEEEEEEEEECSSCEEEEEEETTTEEEEEETT
T ss_pred cccccceEeeccccccccccccccccccccccccccccccCCCceEEeecccEEEEEECCCCCEEEEEcCCCCEEEEECC
Confidence 46789999984 379999999999999999999999999999999999999999
Q ss_pred eEeecccchhHHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCC
Q 020933 101 VIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDP 180 (319)
Q Consensus 101 ~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~ 180 (319)
.+|+++++++.|++++++++++.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.++.++
T Consensus 83 ~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~ 162 (314)
T 2b2c_A 83 IVQATERDEFSYQEMLAHLPMFAHPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHP 162 (314)
T ss_dssp EEEEESSSSSHHHHHHHHHHHHHSSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCT
T ss_pred EeecCCcchhHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCC
Confidence 99999999999999999998887888999999999999999999998777899999999999999999997643234467
Q ss_pred CeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHh
Q 020933 181 RVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (319)
Q Consensus 181 ~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 260 (319)
+++++++|+.+++... +++||+|++|++++..+...+++.+|++.++++|+|||+++++.+++|.+.+.+..+.+.+++
T Consensus 163 rv~~~~~D~~~~l~~~-~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 241 (314)
T 2b2c_A 163 KLDLFCGDGFEFLKNH-KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRK 241 (314)
T ss_dssp TEEEECSCHHHHHHHC-TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHH
T ss_pred CEEEEEChHHHHHHhc-CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHH
Confidence 9999999999998764 678999999998887777778888999999999999999999998888888889999999999
Q ss_pred hcCCceeEeEEeecccCCCee--EEEEcC
Q 020933 261 IFKGSVNYAWTTVPTYPRTFL--PSCSAV 287 (319)
Q Consensus 261 ~F~~~v~~~~~~vP~~~~g~~--~~~S~~ 287 (319)
+|+ .+.++...+|+|++|+| ++||++
T Consensus 242 vF~-~v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 242 IFP-AVTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp HCS-EEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HCC-cceEEEEEecCcCCCceEEEEEeCC
Confidence 994 68888889999999986 888887
No 9
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=100.00 E-value=1.7e-42 Score=327.07 Aligned_cols=241 Identities=25% Similarity=0.446 Sum_probs=201.8
Q ss_pred CCCCCCCCcccCCeeeccCCCCC---CceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHH
Q 020933 40 NKQPDCISSVIPGWFSEISPMWP---GEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMI 116 (319)
Q Consensus 40 ~~~~~~~~~~~~~w~~~~~~~~~---g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l 116 (319)
....|++|||++|| +++.+|| |++++++++++|++++|+||+|.|+++..+|++|+|||.+|++++| +.|+|||
T Consensus 103 ~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~v~~vl~~~~S~yQ~I~V~es~~~G~~L~LDG~~q~te~D-~~YhE~l 179 (364)
T 2qfm_A 103 TGRVKRLPPIVRGG--AIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGNILILSGDVNLAESD-LAYTRAI 179 (364)
T ss_dssp --CEECCCCEEESC--SSCCBCCCTTCCCBBCCEEEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTC-HHHHHHH
T ss_pred ccccccCCCccCCC--ccCceeEccCCcEEEEEeeeEEEeccCCCeeEEEEEeCCcceEEEECCEEeeecCc-hHHHHHH
Confidence 34679999999995 7888999 6899999999999999999999999999999999999999999999 9999999
Q ss_pred HhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccC-CCCCC---CeEEEEcChHHH
Q 020933 117 THLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDP---RVTLHIGDGVAF 192 (319)
Q Consensus 117 ~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~-~~~~~---~v~v~~~D~~~~ 192 (319)
++.++ .++++++||+||||+|+++++++++++ .+|++||+|+.++++|+++|+..+. .++++ +++++++|+++|
T Consensus 180 ~~~~~-~~p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~ 257 (364)
T 2qfm_A 180 MGSGK-EDYTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV 257 (364)
T ss_dssp TTTTC-CCCTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH
T ss_pred hhhhh-hCCCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHH
Confidence 99887 678999999999999999999999965 8999999999999999999986532 24444 899999999999
Q ss_pred HHhC--CCCCccEEEEcCCC-CCCC-ccccchHHHHHHH----HHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCC
Q 020933 193 LKAV--PEGTYDAVIVDSSD-PIGP-AQELFEKPFFESV----AKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKG 264 (319)
Q Consensus 193 l~~~--~~~~fDvIi~D~~~-~~~~-~~~l~~~~f~~~~----~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 264 (319)
++.. .+++||+||+|+++ |.+. +.++++.+||+.+ +++|+|||++++++++++. .+....+.+.+++.|+
T Consensus 258 L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~-~e~~~~~~~~l~~~F~- 335 (364)
T 2qfm_A 258 LKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL-TEALSLYEEQLGRLYC- 335 (364)
T ss_dssp HHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC-HHHHHHHHHHHTTSSS-
T ss_pred HHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch-HHHHHHHHHHHHHhCC-
Confidence 9752 25789999999998 7553 3358999999999 8999999999999987755 3444444445999995
Q ss_pred ceeE--eEEeecccCCCee-EEEEcC
Q 020933 265 SVNY--AWTTVPTYPRTFL-PSCSAV 287 (319)
Q Consensus 265 ~v~~--~~~~vP~~~~g~~-~~~S~~ 287 (319)
.|.+ +...||+|++-|. ..|+|+
T Consensus 336 ~v~~~~~~~~vPsy~~~w~f~~~~k~ 361 (364)
T 2qfm_A 336 PVEFSKEIVCVPSYLELWVFYTVWKK 361 (364)
T ss_dssp CEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred ceEEeeEeeecCCchhheEeEEeecc
Confidence 6766 6788999997444 777776
No 10
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=100.00 E-value=1.6e-42 Score=321.96 Aligned_cols=245 Identities=31% Similarity=0.616 Sum_probs=211.5
Q ss_pred CCCCCcccCCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhcccc
Q 020933 43 PDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLC 122 (319)
Q Consensus 43 ~~~~~~~~~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~ 122 (319)
.+++| +..+||+|..+ |||.+++++++++|++.+|+||+|.|+++..+|+.|++||.+|+++++++.|++++.+++++
T Consensus 9 ~~~~~-~~~~w~~e~~~-~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~ 86 (296)
T 1inl_A 9 RELQP-RQHLWYFEYYT-GNNVGLFMKMNRVIYSGQSDIQRIDIFENPDLGVVFALDGITMTTEKDEFMYHEMLAHVPMF 86 (296)
T ss_dssp CCCCC-CSSEEEEEECT-TSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHH
T ss_pred hhcCC-CCCceEEEecC-CCCceEEeecccEEEEEECCCccEEEEEcCCCcEEEEECCEEeecccchhHHHHHHhHHHHh
Confidence 34555 88899999987 99999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 123 SIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 123 ~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.++++++++++++|+.+++... +++||
T Consensus 87 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD 165 (296)
T 1inl_A 87 LHPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF-KNEFD 165 (296)
T ss_dssp HSSSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC-SSCEE
T ss_pred cCCCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-CCCce
Confidence 78888999999999999999999987678999999999999999999865322334679999999999998654 67899
Q ss_pred EEEEcCCCC-CCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee
Q 020933 203 AVIVDSSDP-IGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL 281 (319)
Q Consensus 203 vIi~D~~~~-~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~ 281 (319)
+|++|++++ .++...+++.++++.++++|+|||++++++++++.+.+.+..+.++++++|+ .+.++...+|+||+|.|
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~~~~vp~~p~g~~ 244 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFP-ITRVYLGFMTTYPSGMW 244 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCS-EEEEEEEECTTSTTSEE
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCC-ceEEEEeecCccCCCce
Confidence 999999887 6667778889999999999999999999998888888889999999999995 67777788999998877
Q ss_pred --EEEEcCCCCC
Q 020933 282 --PSCSAVNSDL 291 (319)
Q Consensus 282 --~~~S~~~~~~ 291 (319)
++||++..+.
T Consensus 245 ~f~~as~~~~~~ 256 (296)
T 1inl_A 245 SYTFASKGIDPI 256 (296)
T ss_dssp EEEEEESSCCTT
T ss_pred EEEEecCCCChh
Confidence 7888874443
No 11
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=100.00 E-value=5.2e-42 Score=322.03 Aligned_cols=248 Identities=52% Similarity=0.952 Sum_probs=220.1
Q ss_pred ccCCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhccccCCCCCc
Q 020933 49 VIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPK 128 (319)
Q Consensus 49 ~~~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~ 128 (319)
+..+||+|..++|||.+++++++++|++++|+||+|.|+++..+|+.|++||.+|+++++++.|+|++.+++++.+++++
T Consensus 39 ~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~~~~~~~ 118 (321)
T 2pt6_A 39 FSKKWFSEFSIMWPGQAFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPK 118 (321)
T ss_dssp --CCEEEECCTTSTTCCEEEEEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSSCC
T ss_pred ccceEEEEeccCCCCceEEEecccEEEEEECCCceEEEEEcCCCcEEEEECCEeeeCcccchHHHHHHHHHHHhcCCCCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999998888788889
Q ss_pred eeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcC
Q 020933 129 KVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDS 208 (319)
Q Consensus 129 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~ 208 (319)
+|||||||+|.++++++++.+..+|++||+|+.+++.|+++++....++++++++++++|+.+++... +++||+|++|.
T Consensus 119 ~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fDvIi~d~ 197 (321)
T 2pt6_A 119 NVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-TNTYDVIIVDS 197 (321)
T ss_dssp EEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-CSCEEEEEEEC
T ss_pred EEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc-CCCceEEEECC
Confidence 99999999999999999987778999999999999999999876422344679999999999998764 67899999999
Q ss_pred CCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee--EEEEc
Q 020933 209 SDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL--PSCSA 286 (319)
Q Consensus 209 ~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~--~~~S~ 286 (319)
+++.++...+++.++++.++++|+|||+++++..+++.+.+.+..+.+.++++|+ .+.++...+|+|++|+| ++||+
T Consensus 198 ~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~~~~vp~~~~g~w~f~~as~ 276 (321)
T 2pt6_A 198 SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFK-KVEYANISIPTYPCGCIGILCCSK 276 (321)
T ss_dssp CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCS-EEEEEEEECTTSGGGEEEEEEEES
T ss_pred cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCC-CeEEEEEEeccccCceEEEEEeeC
Confidence 8888777778889999999999999999999988888888899999999999994 67788889999999887 78898
Q ss_pred CCCCCCCCccCc
Q 020933 287 VNSDLSPSMPSL 298 (319)
Q Consensus 287 ~~~~~~~~~~~l 298 (319)
+..+.+....++
T Consensus 277 ~~~p~~~~~~~~ 288 (321)
T 2pt6_A 277 TDTGLTKPNKKL 288 (321)
T ss_dssp STTCSSSCSSCC
T ss_pred CCCccchhHHHH
Confidence 765655443333
No 12
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=100.00 E-value=3e-41 Score=314.55 Aligned_cols=241 Identities=46% Similarity=0.898 Sum_probs=209.6
Q ss_pred CCcccCCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEec---CCeeEEEEcCeEeecccchhHHHHHHHhcccc
Q 020933 46 ISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSS---TYGKVLILDGVIQLTERDECAYQEMITHLPLC 122 (319)
Q Consensus 46 ~~~~~~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~---~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~ 122 (319)
.+.+..+||+|..++|||++++++++++|++.+|+||+|.|+++. .+|++|++||.+|+++.+++.|++++.+++++
T Consensus 12 ~~~~~~~w~~e~~~~~~~~~~~~~~~~~l~~~~s~~q~i~v~~~~p~g~~g~~l~ldg~~~~~~~de~~y~e~l~~~~l~ 91 (304)
T 3bwc_A 12 SELISGGWFREENDQWPGQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDEFVYHEVLGHTSLC 91 (304)
T ss_dssp CCCCTTSEEEECCSSSCSEEEEEEEEEEEEEEECSSSEEEEEEECTTSSCCEEEEETTEEEEETTTHHHHHHHHHHHHHT
T ss_pred CccccCceEEEeccCCCCceEEEecccEEEEeECCCCCEEEEEecCCCccceEEEECCeeeeecccchHHHHHHhhhhhh
Confidence 456788999999999999999999999999999999999999999 89999999999999999999999999999888
Q ss_pred CCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 123 SIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 123 ~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
.++++++|||||||+|.++++++++.+..+|++||+|+.+++.|+++++.....+.+++++++++|+.+++...++++||
T Consensus 92 ~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 92 SHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp TSSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred cCCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCcee
Confidence 88889999999999999999999987778999999999999999999864322345689999999999998652367899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhh-cCCceeEeEEeecccCCCee
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI-FKGSVNYAWTTVPTYPRTFL 281 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~~v~~~~~~vP~~~~g~~ 281 (319)
+|++|.+++..+...+++.+|++.++++|||||+++++..++|.+......+.+.++++ |+ .+.++...+|+||+|.|
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~-~v~~~~~~vP~yp~g~w 250 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFA-SVQYALMHVPTYPCGSI 250 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCS-EEEEEECCCTTSTTSCC
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCC-cEEEEEeecccccCcce
Confidence 99999998887778888899999999999999999999988888888889999999999 94 67777788999998877
Q ss_pred --EEEEcC
Q 020933 282 --PSCSAV 287 (319)
Q Consensus 282 --~~~S~~ 287 (319)
++||++
T Consensus 251 ~f~~as~~ 258 (304)
T 3bwc_A 251 GTLVCSKK 258 (304)
T ss_dssp EEEEEESS
T ss_pred EEEEEeCC
Confidence 888886
No 13
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=100.00 E-value=4.2e-40 Score=308.15 Aligned_cols=236 Identities=36% Similarity=0.608 Sum_probs=207.9
Q ss_pred CCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhccccCCCCCcee
Q 020933 51 PGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKV 130 (319)
Q Consensus 51 ~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~V 130 (319)
.+||+|.. +||++++++++++|++.+|+||+|.|+++..+|++|++||.+|+++.+++.|++++.|++++.++++++|
T Consensus 4 ~~w~~e~~--~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~~q~~~~~e~~Y~e~l~~~~l~~~~~~~~V 81 (314)
T 1uir_A 4 GMYFFEHV--TPYETLVRRMERVIASGKTPFQDYFLFESKGFGKVLILDKDVQSTERDEYIYHETLVHPAMLTHPEPKRV 81 (314)
T ss_dssp SCEEEEES--SSSEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTEEEEETTTHHHHHHHHHHHHHHHSSCCCEE
T ss_pred CceEEEEc--CCCcEEEEecceEEEEEECCCCCEEEEEcCCCcEEEEECCEEeeeecchhHHHHHHHHHHHhcCCCCCeE
Confidence 57999987 4999999999999999999999999999999999999999999999999999999999998888899999
Q ss_pred eEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCC-CCCCCeEEEEcChHHHHHhCCCCCccEEEEcCC
Q 020933 131 LVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG-FEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSS 209 (319)
Q Consensus 131 L~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~-~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~ 209 (319)
||||||+|.++++++++.+..+|++||+|+.+++.|+++++..+.+ +++++++++++|+.+++... +++||+|++|.+
T Consensus 82 LdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-~~~fD~Ii~d~~ 160 (314)
T 1uir_A 82 LIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT-EERYDVVIIDLT 160 (314)
T ss_dssp EEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC-CCCEEEEEEECC
T ss_pred EEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc-CCCccEEEECCC
Confidence 9999999999999999877789999999999999999998753222 34689999999999998765 688999999999
Q ss_pred CCC---CCccccchHHHHHHHHHhcCCCcEEEEecCCcc-cChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee--EE
Q 020933 210 DPI---GPAQELFEKPFFESVAKALRPGGVVSTQAESIW-LHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL--PS 283 (319)
Q Consensus 210 ~~~---~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~-~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~--~~ 283 (319)
++. ++...+++.+|++.++++|+|||+++++..+++ .+.+.+..+.+.++++|+ .+.++...+|++ +|.| ++
T Consensus 161 ~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~-~v~~~~~~vP~~-~g~~~~~~ 238 (314)
T 1uir_A 161 DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFR-YVRSYKNHIPGF-FLNFGFLL 238 (314)
T ss_dssp CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCS-EEEEEEEEEGGG-TEEEEEEE
T ss_pred CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCC-ceEEEEEecCCC-CCeEEEEE
Confidence 887 666778889999999999999999999987777 667788999999999994 677777889999 5655 88
Q ss_pred EEcCCCCC
Q 020933 284 CSAVNSDL 291 (319)
Q Consensus 284 ~S~~~~~~ 291 (319)
||++..+.
T Consensus 239 as~~~~p~ 246 (314)
T 1uir_A 239 ASDAFDPA 246 (314)
T ss_dssp EESSSCTT
T ss_pred EECCCCcc
Confidence 99874443
No 14
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=100.00 E-value=2.6e-39 Score=298.17 Aligned_cols=229 Identities=35% Similarity=0.604 Sum_probs=201.0
Q ss_pred CCeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhccccCCCCCcee
Q 020933 51 PGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKV 130 (319)
Q Consensus 51 ~~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~V 130 (319)
++||+|..+ ||++++++++++|++.+|+||+|.|+++..+|+.|++||.+|+++++++.|++++.+++++.++++++|
T Consensus 2 ~~w~~e~~~--~~~~~~~~~~~~l~~~~s~~~~i~v~~~~~~g~~L~ldg~~q~~~~d~~~y~e~l~~~~l~~~~~~~~V 79 (281)
T 1mjf_A 2 ERAFIEWYP--RGYGVAFKIKKKIYEKLSKYQKIEVYETEGFGRLLALDGTVQLVTLGERSYHEPLVHPAMLAHPKPKRV 79 (281)
T ss_dssp --CEEEEEG--GGEEEEECEEEEEEEEECSSCEEEEEEESSSCEEEEETTEEEEETTTTHHHHHHHHHHHHHHSSCCCEE
T ss_pred CccEEEecC--CCceEEEeeccEEEEeeCCCccEEEEECCCccEEEEECCEeeeccccchHHHHHHHHHHHhhCCCCCeE
Confidence 479999874 899999999999999999999999999999999999999999999999999999999888778888999
Q ss_pred eEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCC-------CCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 131 LVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGF-------EDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 131 L~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~-------~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
||||||+|.++++++++ +..+|++||+|+.+++.|++++ ..+.++ .+++++++++|+.+++.. +++||+
T Consensus 80 LdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~--~~~fD~ 155 (281)
T 1mjf_A 80 LVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN--NRGFDV 155 (281)
T ss_dssp EEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH--CCCEEE
T ss_pred EEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc--cCCeeE
Confidence 99999999999999999 7789999999999999999998 442233 467999999999999875 578999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee--
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL-- 281 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~-- 281 (319)
|++|.+++.+++..+++.+|++.++++|+|||+++++.++++.+.+.+..+.+.++++|+ .+.++...+|++ +|.|
T Consensus 156 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~-~v~~~~~~vP~~-~g~~~~ 233 (281)
T 1mjf_A 156 IIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFD-RVYYYSFPVIGY-ASPWAF 233 (281)
T ss_dssp EEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCS-EEEEEEECCTTS-SSSEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCC-ceEEEEEecCCC-CceEEE
Confidence 999999887777778889999999999999999999988888888889999999999994 677777889999 5655
Q ss_pred EEEEcC
Q 020933 282 PSCSAV 287 (319)
Q Consensus 282 ~~~S~~ 287 (319)
++||++
T Consensus 234 ~~as~~ 239 (281)
T 1mjf_A 234 LVGVKG 239 (281)
T ss_dssp EEEEES
T ss_pred EEeeCC
Confidence 888886
No 15
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=100.00 E-value=5.5e-39 Score=293.36 Aligned_cols=218 Identities=17% Similarity=0.209 Sum_probs=193.2
Q ss_pred CeeeccCCCCCCceeEeecceEEEEEeCCCccEEEEEecCCeeEEEEcCeEeecccchhHHHHHHHhccccCCCCCceee
Q 020933 52 GWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVL 131 (319)
Q Consensus 52 ~w~~~~~~~~~g~~~~~~~~~vl~~~~s~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y~e~l~~l~l~~~~~~~~VL 131 (319)
+||+|.. |||++++++++++|++++|+||+|.|++++.+|++|++||. |+++.+++.|++++.+++++.++++++||
T Consensus 1 ~w~~e~~--~~~~~~~~~~~~vl~~~~s~~q~i~v~~~~~~g~~l~ldg~-q~~~~d~~~y~e~l~~~~~~~~~~~~~VL 77 (262)
T 2cmg_A 1 MWITQEI--TPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ-LLFKNFLHIESELLAHMGGCTKKELKEVL 77 (262)
T ss_dssp CEEEEEE--ETTEEEEEECSEEEEEEECSSCEEEEEEETTTEEEEEETTE-EEEGGGTHHHHHHHHHHHHTTSSCCCEEE
T ss_pred CcEEEEc--CCCceEEEEEeeEEEeeECCCceEEEEECCCccEEEEEcCc-ccccchHHHHHHHHHHHhhhcCCCCCEEE
Confidence 5999987 69999999999999999999999999999999999999999 99999999999999999988888899999
Q ss_pred EeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCC
Q 020933 132 VIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDP 211 (319)
Q Consensus 132 ~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~ 211 (319)
+||||+|.++++++++ + .+|++||+|+.+++.|+++++....++.+++++++++|+.+++ ++||+|++|++++
T Consensus 78 ~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-----~~fD~Ii~d~~dp 150 (262)
T 2cmg_A 78 IVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-----KKYDLIFCLQEPD 150 (262)
T ss_dssp EESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-----CCEEEEEESSCCC
T ss_pred EEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-----hhCCEEEECCCCh
Confidence 9999999999999999 7 8999999999999999999875322345689999999999875 6799999997664
Q ss_pred CCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee--EEEEcCCC
Q 020933 212 IGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL--PSCSAVNS 289 (319)
Q Consensus 212 ~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~--~~~S~~~~ 289 (319)
. .||+.++++|+|||+++++.++++.+...+..+.++++++|+ .+.++...+|+ +|+| ++||++..
T Consensus 151 ~---------~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~-~~~~~~~~vP~--~g~~~~~~as~~~~ 218 (262)
T 2cmg_A 151 I---------HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFS-VAMPFVAPLRI--LSNKGYIYASFKTH 218 (262)
T ss_dssp H---------HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCS-EEEEECCTTCT--TCCEEEEEEESSCC
T ss_pred H---------HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCC-ceEEEEEccCC--CcccEEEEeeCCCC
Confidence 2 389999999999999999988888777788999999999995 57776677898 5665 68998755
Q ss_pred CC
Q 020933 290 DL 291 (319)
Q Consensus 290 ~~ 291 (319)
+.
T Consensus 219 p~ 220 (262)
T 2cmg_A 219 PL 220 (262)
T ss_dssp TT
T ss_pred ch
Confidence 54
No 16
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=5.3e-34 Score=265.94 Aligned_cols=228 Identities=18% Similarity=0.196 Sum_probs=188.6
Q ss_pred ccEEEEEec--CCeeEEEEcCeEeecc------cchhHHHHHHHhcccc---CCCCCc--eeeEeeccccHHHHHHHhcC
Q 020933 82 QNVMVFQSS--TYGKVLILDGVIQLTE------RDECAYQEMITHLPLC---SIPNPK--KVLVIGGGDGGVLREVSRHS 148 (319)
Q Consensus 82 q~i~v~~~~--~~g~~L~ldg~~q~~~------~de~~Y~e~l~~l~l~---~~~~~~--~VL~IG~G~G~~~~~l~~~~ 148 (319)
...+|.... .+|++|+|||.+|++. .+++.|+++|+|++++ .+++++ +||+||||+|.++++++++.
T Consensus 32 ~~~~~~~d~~~~~g~~L~lDG~~Qs~~~l~dP~~le~~Y~e~m~~~~~~l~~~~p~p~~~rVLdIG~G~G~la~~la~~~ 111 (317)
T 3gjy_A 32 SVIELEADSYTTDGWLISINGVPSSHIVLGQPQALEFEYMRWIATGARAFIDAHQDASKLRITHLGGGACTMARYFADVY 111 (317)
T ss_dssp SEEEEEECSSSTTEEEEEETTEEEEEEETTCTTCCCSHHHHHHHHHHHHHHHHHSCGGGCEEEEESCGGGHHHHHHHHHS
T ss_pred eeEEEEecCCCCceEEEEECCEeEEEEECCCCcchhhHHHHHHHHHHHhhcccCCCCCCCEEEEEECCcCHHHHHHHHHC
Confidence 336677665 4899999999999985 5899999999999887 577776 99999999999999999954
Q ss_pred CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHH
Q 020933 149 SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVA 228 (319)
Q Consensus 149 ~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~ 228 (319)
+..+|++||||+.++++|+++|+.. .+++++++++|+++++...++++||+||+|.+++...+.++++.+||+.++
T Consensus 112 p~~~v~~VEidp~vi~~Ar~~~~~~----~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~ 187 (317)
T 3gjy_A 112 PQSRNTVVELDAELARLSREWFDIP----RAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCH 187 (317)
T ss_dssp TTCEEEEEESCHHHHHHHHHHSCCC----CTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHH
T ss_pred CCcEEEEEECCHHHHHHHHHhcccc----CCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHH
Confidence 5569999999999999999999754 468999999999999976545789999999999888788899999999999
Q ss_pred HhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEeecccC--CCee-EEEEcCCCCC------CCCccCcc
Q 020933 229 KALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYP--RTFL-PSCSAVNSDL------SPSMPSLH 299 (319)
Q Consensus 229 ~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~--~g~~-~~~S~~~~~~------~~~~~~l~ 299 (319)
++|+|||+|+++..+. .....++.++++++++|+ .+..+....|.++ .+|+ ++||+.+.+. +....+++
T Consensus 188 r~LkpgGvlv~~~~~~-~~~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g~~~gN~Vl~As~~plp~~~~~~~~~l~r~~~ 265 (317)
T 3gjy_A 188 RGLAPGGLYVANCGDH-SDLRGAKSELAGMMEVFE-HVAVIADPPMLKGRRYGNIILMGSDTEFFSSNSTEASAITRELL 265 (317)
T ss_dssp HHEEEEEEEEEEEEEC-TTCHHHHHHHHHHHHHCS-EEEEEECHHHHTTSSCEEEEEEEESSCCCCTTSHHHHHHHHHHT
T ss_pred HhcCCCcEEEEEecCC-cchHHHHHHHHHHHHHCC-ceEEEEecCCCCCCcCceEEEEEECCCCCcccccchHHHHHHHc
Confidence 9999999999997543 234678899999999995 4544433445443 3455 9999987766 56677889
Q ss_pred CCCcccccccchhccc
Q 020933 300 GHPFPIRIKWCMFLHS 315 (319)
Q Consensus 300 ~~p~~~~~~~~~~~~~ 315 (319)
+.+.|.+++...|+..
T Consensus 266 ~~~~p~~~~~~~~l~~ 281 (317)
T 3gjy_A 266 GGGVPAQYKDESWVRK 281 (317)
T ss_dssp SSSSCCEEECHHHHHH
T ss_pred CCCCCeEEECHHHHHH
Confidence 9999999998877654
No 17
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.64 E-value=1.6e-15 Score=135.52 Aligned_cols=122 Identities=17% Similarity=0.198 Sum_probs=95.3
Q ss_pred hHHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcCh
Q 020933 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG 189 (319)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~ 189 (319)
..|.+.++.+ ..+++.+|||||||+|..+..++++.+ .++++||+|+.+++.|++++... ..+++++.+|+
T Consensus 47 ~~~m~~~a~~---~~~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~-----~~~~~~~~~~a 117 (236)
T 3orh_A 47 TPYMHALAAA---ASSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLW 117 (236)
T ss_dssp HHHHHHHHHH---HTTTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCH
T ss_pred HHHHHHHHHh---hccCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC-----CCceEEEeehH
Confidence 4455544432 234678999999999999999998854 68999999999999999987653 46899999999
Q ss_pred HHHHHhCCCCCccEEEEcCCCCCCCcccc-chHHHHHHHHHhcCCCcEEEEe
Q 020933 190 VAFLKAVPEGTYDAVIVDSSDPIGPAQEL-FEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 190 ~~~l~~~~~~~fDvIi~D~~~~~~~~~~l-~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
...+...++++||.|+.|.........+. ....++++++|+|||||+|++.
T Consensus 118 ~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 118 EDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred HhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 98877666789999998876543322222 2357899999999999999874
No 18
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.61 E-value=6e-15 Score=126.58 Aligned_cols=110 Identities=18% Similarity=0.179 Sum_probs=88.7
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+++++... +. ++++++++|+.+++...++++||+|
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~--~~--~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEAL--GL--SGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHH--TC--SCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHc--CC--CceEEEEccHHHHHhhccCCCccEE
Confidence 35679999999999999988876 4568999999999999999998765 22 5899999999998765546899999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHH--hcCCCcEEEEecC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAK--ALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~--~LkpgG~lv~~~~ 242 (319)
++|.+..... -...++++.+.+ +|+|||+++++..
T Consensus 118 ~~~~p~~~~~---~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 118 LADPPYNVDS---ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EECCCTTSCH---HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EECCCCCcch---hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 9886533210 113568889988 9999999999764
No 19
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.60 E-value=9.3e-15 Score=129.17 Aligned_cols=127 Identities=20% Similarity=0.222 Sum_probs=100.2
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCCccEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~fDvI 204 (319)
...+|||||||+|.++..+++..+..+|++||+++.+++.|+++.... .-.+++++.+|+.+++.. .++++||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~----~l~nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEE----GLSNLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHT----TCSSEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHh----CCCcEEEEECCHHHHHHHHcCCCChheE
Confidence 456999999999999999998877789999999999999999987644 234799999999997653 457899999
Q ss_pred EEcCCCCCCCc----cccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHh
Q 020933 205 IVDSSDPIGPA----QELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (319)
Q Consensus 205 i~D~~~~~~~~----~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 260 (319)
++..++|+... .++...++++.+.++|||||++++.+.. ......+.+.+..
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~----~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW----EPYAEHMLEVMSS 165 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC----HHHHHHHHHHHHT
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC----HHHHHHHHHHHHh
Confidence 99877776432 2345568999999999999999987643 2344555555544
No 20
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.60 E-value=8.3e-15 Score=129.74 Aligned_cols=104 Identities=15% Similarity=0.211 Sum_probs=87.4
Q ss_pred ceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEE
Q 020933 128 KKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (319)
Q Consensus 128 ~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~ 206 (319)
.+|||||||+|..+..+++. ++..+|++||+|+.+++.|++++... ++.+++++++++|+.+++...++++||+|++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA--GYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT--TCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 39999999999999999985 44689999999999999999998765 3332589999999999887654578999999
Q ss_pred cCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 207 D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|..... ..++++.+.++|||||++++.
T Consensus 136 d~~~~~-------~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 136 QVSPMD-------LKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CCCTTT-------HHHHHHHHHHHEEEEEEEEET
T ss_pred cCcHHH-------HHHHHHHHHHHcCCCcEEEEe
Confidence 864321 346899999999999999985
No 21
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.59 E-value=1.9e-14 Score=126.47 Aligned_cols=127 Identities=17% Similarity=0.213 Sum_probs=98.0
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
+..+|||||||+|.++..+++..+..+|++||+++.+++.|++++... ..++++++.+|+.++....++++||.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~----~~~nv~~~~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS----EAQNVKLLNIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS----CCSSEEEECCCGGGHHHHCCTTSCCEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc----CCCCEEEEeCCHHHHHhhcCcCCcCEEE
Confidence 456899999999999999998767789999999999999999987654 2257999999998854334467899999
Q ss_pred EcCCCCCCCc----cccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHh
Q 020933 206 VDSSDPIGPA----QELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (319)
Q Consensus 206 ~D~~~~~~~~----~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 260 (319)
+..++|+... ..+....+++.+.++|||||.+++.+.+ ......+.+.+.+
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~----~~~~~~~~~~~~~ 168 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN----RGLFEYSLKSFSE 168 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC----HHHHHHHHHHHHH
T ss_pred EECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC----HHHHHHHHHHHHH
Confidence 8877765432 2344678999999999999999987543 2334444444443
No 22
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.58 E-value=2.1e-14 Score=129.99 Aligned_cols=130 Identities=15% Similarity=0.277 Sum_probs=96.7
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhcccc---ccCCCCCCCeEEEEcChHHHHH-----hC
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPD---VAVGFEDPRVTLHIGDGVAFLK-----AV 196 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~---~~~~~~~~~v~v~~~D~~~~l~-----~~ 196 (319)
.++.+|||||||+|.++..++++.+..+|++||+++.+++.|++++.. . ++. .+++++++|+.++.. ..
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~--~l~-~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNA--AFS-ARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGT--TTG-GGEEEEECCTTCCHHHHHHTTC
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhC--CCc-ceEEEEeCCHHHHhhhhhhhcc
Confidence 456799999999999999999887678999999999999999999875 3 222 379999999988743 12
Q ss_pred CCCCccEEEEcCCCCCCC--------------ccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhc
Q 020933 197 PEGTYDAVIVDSSDPIGP--------------AQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIF 262 (319)
Q Consensus 197 ~~~~fDvIi~D~~~~~~~--------------~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F 262 (319)
++++||+|+++++..... ........+++.+.++|||||.+++... ......+.+.+++.|
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~-----~~~~~~~~~~l~~~~ 186 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR-----PQSVAEIIAACGSRF 186 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC-----GGGHHHHHHHHTTTE
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc-----HHHHHHHHHHHHhcC
Confidence 357899999985432110 0011246789999999999999987532 234556667777666
No 23
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.58 E-value=1.5e-14 Score=126.53 Aligned_cols=113 Identities=19% Similarity=0.317 Sum_probs=91.7
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
...+|||||||+|.++..+++..+..++++||+++.+++.|++++... + -++++++.+|+.++....++++||+|+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~--~--~~~v~~~~~d~~~~~~~~~~~~~D~i~ 116 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV--G--VPNIKLLWVDGSDLTDYFEDGEIDRLY 116 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--C--CSSEEEEECCSSCGGGTSCTTCCSEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc--C--CCCEEEEeCCHHHHHhhcCCCCCCEEE
Confidence 467999999999999999998877789999999999999999987654 2 258999999998754323467899999
Q ss_pred EcCCCCCCCc----cccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 206 VDSSDPIGPA----QELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 206 ~D~~~~~~~~----~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++.++++... ..+....+++.+.++|+|||++++.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 117 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred EECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 9877665321 223457899999999999999998754
No 24
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.58 E-value=3.3e-14 Score=126.30 Aligned_cols=104 Identities=23% Similarity=0.350 Sum_probs=88.0
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHH-hCCCCCccEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLK-AVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~-~~~~~~fDvI 204 (319)
++++|||||||+|..+..+++..+..+|++||+++.+++.|++++... ++ .++++++.+|+.+++. .. +++||+|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~-~~~fD~V 146 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY--HF-ENQVRIIEGNALEQFENVN-DKVYDMI 146 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT--TC-TTTEEEEESCGGGCHHHHT-TSCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEECCHHHHHHhhc-cCCccEE
Confidence 568999999999999999998666789999999999999999998764 22 2489999999998776 54 6789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++|..... ...+++.+.++|+|||++++.
T Consensus 147 ~~~~~~~~-------~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 147 FIDAAKAQ-------SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp EEETTSSS-------HHHHHHHHGGGEEEEEEEEEE
T ss_pred EEcCcHHH-------HHHHHHHHHHhcCCCeEEEEe
Confidence 98864321 457999999999999999984
No 25
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.56 E-value=1.4e-14 Score=131.52 Aligned_cols=108 Identities=15% Similarity=0.193 Sum_probs=84.6
Q ss_pred CCCCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
.+++.+|||||||+|..+..++++. +..+|++||+++.|++.|++++... + ...+++++++|+.++ +.+.|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~--~-~~~~v~~~~~D~~~~----~~~~~ 140 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY--K-APTPVDVIEGDIRDI----AIENA 140 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS--C-CSSCEEEEESCTTTC----CCCSE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh--c-cCceEEEeecccccc----ccccc
Confidence 4567899999999999999998863 4568999999999999999987654 2 235899999997764 34679
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|+|++...-...+... ...++++++++|||||+|++.
T Consensus 141 d~v~~~~~l~~~~~~~--~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 141 SMVVLNFTLQFLEPSE--RQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp EEEEEESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceeeeeeeecCchh--HhHHHHHHHHHcCCCcEEEEE
Confidence 9999865433222111 246899999999999999875
No 26
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.56 E-value=4.4e-14 Score=126.89 Aligned_cols=106 Identities=21% Similarity=0.308 Sum_probs=87.8
Q ss_pred CCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCC-CCCccE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP-EGTYDA 203 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~-~~~fDv 203 (319)
++++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++... ++. ++++++++|+.+++.... .++||+
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--g~~-~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA--GVD-QRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT--TCT-TTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCC-CcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 568999999999999999998754 689999999999999999998754 332 489999999999876552 248999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|++|.... ....+++.+.++|||||++++..
T Consensus 140 V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 140 IFIDADKP-------NNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp EEECSCGG-------GHHHHHHHHHHTCCTTCEEEEEC
T ss_pred EEECCchH-------HHHHHHHHHHHhcCCCeEEEEeC
Confidence 99986421 13578999999999999999864
No 27
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.56 E-value=2.8e-14 Score=127.42 Aligned_cols=107 Identities=23% Similarity=0.358 Sum_probs=88.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-----CC
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-----PE 198 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-----~~ 198 (319)
.++++|||||||+|..+..+++..+ ..+|+++|+|+.+++.|++++... ++ .++++++++|+.+++... +.
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA--GV-EHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHHhccCCC
Confidence 3678999999999999999998643 689999999999999999998754 33 348999999999876542 14
Q ss_pred CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++||+|++|.... ....+++.+.++|+|||++++..
T Consensus 146 ~~fD~I~~d~~~~-------~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 146 GSYDFGFVDADKP-------NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCcCEEEECCchH-------HHHHHHHHHHHhcCCCeEEEEec
Confidence 6899999985421 14679999999999999999863
No 28
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.56 E-value=3e-14 Score=128.15 Aligned_cols=106 Identities=21% Similarity=0.314 Sum_probs=87.3
Q ss_pred CCCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-----CC
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-----PE 198 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-----~~ 198 (319)
.++++|||||||+|..+..+++..+ ..+|+++|+|+.+++.|++++... ++ .++++++++|+.+++... ..
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA--GV-DHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCCeEEEECCHHHHHHHHHhccCCC
Confidence 3578999999999999999998643 679999999999999999998764 33 358999999999876532 14
Q ss_pred CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++||+|++|.... ....+++.+.++|+|||++++.
T Consensus 155 ~~fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 155 GSYDFIFVDADKD-------NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp TCBSEEEECSCST-------THHHHHHHHHHHBCTTCCEEEE
T ss_pred CCEEEEEEcCchH-------HHHHHHHHHHHhCCCCeEEEEe
Confidence 7899999986521 1457999999999999999975
No 29
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.55 E-value=9e-14 Score=123.94 Aligned_cols=121 Identities=9% Similarity=0.024 Sum_probs=91.2
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCCccEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~fDvI 204 (319)
.+.+|||||||+|..+..+++..+..+|++||+++.+++.+++++... + -++++++++|+.++.... ..++||+|
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~--~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL--Q--LENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--T--CSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--C--CCCEEEEeccHHHhcccccccCCccEE
Confidence 567999999999999999987555679999999999999999987654 2 236999999998864210 14689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHh
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 260 (319)
+++... ....+++.+.++|+|||++++..+.. ..+.+..+.+.+++
T Consensus 146 ~~~~~~--------~~~~~l~~~~~~LkpgG~l~~~~g~~--~~~~~~~~~~~l~~ 191 (240)
T 1xdz_A 146 TARAVA--------RLSVLSELCLPLVKKNGLFVALKAAS--AEEELNAGKKAITT 191 (240)
T ss_dssp EEECCS--------CHHHHHHHHGGGEEEEEEEEEEECC---CHHHHHHHHHHHHH
T ss_pred EEeccC--------CHHHHHHHHHHhcCCCCEEEEEeCCC--chHHHHHHHHHHHH
Confidence 987631 14579999999999999998864322 23344455555544
No 30
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.55 E-value=3.6e-14 Score=124.57 Aligned_cols=106 Identities=20% Similarity=0.295 Sum_probs=86.8
Q ss_pred CCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCC---CCCc
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP---EGTY 201 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~---~~~f 201 (319)
++++|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++... ++ ..+++++++|+.+.+.... .++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA--NL-NDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 578999999999999999998754 679999999999999999998754 22 2479999999988765321 2679
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+|++|...+ ....+++.+.++|+|||++++..
T Consensus 135 D~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 135 DFIFIDADKQ-------NNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp SEEEECSCGG-------GHHHHHHHHHHTCCTTCEEEEES
T ss_pred CEEEEcCCcH-------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 9999986522 13579999999999999999864
No 31
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.55 E-value=1.7e-13 Score=116.43 Aligned_cols=125 Identities=13% Similarity=0.223 Sum_probs=95.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|.++..+++. ..+++++|+++.+++.+++++... +..+.+++++.+|+.+.+. +++||+|
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~~~~d~~~~~~---~~~~D~v 123 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLN--NLDNYDIRVVHSDLYENVK---DRKYNKI 123 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHT--TCTTSCEEEEECSTTTTCT---TSCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECchhcccc---cCCceEE
Confidence 35679999999999999999988 478999999999999999987654 2222259999999877542 5789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFK 263 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 263 (319)
+++....... .....+++.+.++|+|||.+++...+ ......+.+.+++.|.
T Consensus 124 ~~~~~~~~~~---~~~~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~l~~~~~ 175 (194)
T 1dus_A 124 ITNPPIRAGK---EVLHRIIEEGKELLKDNGEIWVVIQT----KQGAKSLAKYMKDVFG 175 (194)
T ss_dssp EECCCSTTCH---HHHHHHHHHHHHHEEEEEEEEEEEES----THHHHHHHHHHHHHHS
T ss_pred EECCCcccch---hHHHHHHHHHHHHcCCCCEEEEEECC----CCChHHHHHHHHHHhc
Confidence 9876432211 11357899999999999999987533 2344556677777784
No 32
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.53 E-value=3.9e-14 Score=123.45 Aligned_cols=103 Identities=20% Similarity=0.301 Sum_probs=85.8
Q ss_pred CCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
++++|||||||+|..+..+++..+ ..+|+++|+|+.+++.+++++... ++ .++++++.+|+.+++... ++ ||+|
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~-~~-fD~v 130 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN--GL-IDRVELQVGDPLGIAAGQ-RD-IDIL 130 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--SG-GGGEEEEESCHHHHHTTC-CS-EEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--CC-CceEEEEEecHHHHhccC-CC-CCEE
Confidence 567999999999999999998754 679999999999999999988654 22 247999999999887654 46 9999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++|.... ....+++.+.++|||||++++.
T Consensus 131 ~~~~~~~-------~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 131 FMDCDVF-------NGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EEETTTS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEcCChh-------hhHHHHHHHHHhcCCCeEEEEE
Confidence 9985421 2467999999999999999985
No 33
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.53 E-value=1.2e-13 Score=124.50 Aligned_cols=126 Identities=17% Similarity=0.152 Sum_probs=93.4
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++.+|||||||+|.++..+++..+ .+|++||+++.+++.|++++... ++. .+++++++|+.++....+.++||+|+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~--~~~-~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYN--QLE-DQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHT--TCT-TTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHC--CCc-ccEEEEECcHHHhhhhhccCCccEEE
Confidence 567999999999999999998864 38999999999999999998754 332 47999999999887544468999999
Q ss_pred EcCCCCCC----Ccc------------ccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHh
Q 020933 206 VDSSDPIG----PAQ------------ELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (319)
Q Consensus 206 ~D~~~~~~----~~~------------~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 260 (319)
+|++.... ... .....++++.+.++|||||++++.. .......+.+.+++
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-----~~~~~~~~~~~l~~ 190 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH-----RPERLLDIIDIMRK 190 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE-----CTTTHHHHHHHHHH
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE-----cHHHHHHHHHHHHH
Confidence 98653111 000 0112468999999999999999843 22334455555554
No 34
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.52 E-value=1.7e-14 Score=130.70 Aligned_cols=115 Identities=17% Similarity=0.233 Sum_probs=86.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+...+|||||||+|..+..++++. .+|++||+|+.+++.|++ .++++++++|+.+.. .++++||+|
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~----------~~~v~~~~~~~e~~~--~~~~sfD~v 103 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR----------HPRVTYAVAPAEDTG--LPPASVDVA 103 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC----------CTTEEEEECCTTCCC--CCSSCEEEE
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh----------cCCceeehhhhhhhc--ccCCcccEE
Confidence 456799999999999999999885 689999999999987654 258999999987652 347899999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHH
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANC 258 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l 258 (319)
++...-++.. ...++++++|+|||||+|++...........+..+++.+
T Consensus 104 ~~~~~~h~~~-----~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~~~~ 152 (257)
T 4hg2_A 104 IAAQAMHWFD-----LDRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDRL 152 (257)
T ss_dssp EECSCCTTCC-----HHHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHHHHH
T ss_pred EEeeehhHhh-----HHHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHHHHH
Confidence 9855444332 457999999999999999886543222233344444433
No 35
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.52 E-value=4.5e-14 Score=125.36 Aligned_cols=110 Identities=18% Similarity=0.213 Sum_probs=85.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++.. ..+|++||+++.+++.|+++.... ..+++++++|+.+.+...++++||+|
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~fD~V 132 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ-----THKVIPLKGLWEDVAPTLPDGHFDGI 132 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGC-----SSEEEEEESCHHHHGGGSCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhc-----CCCeEEEecCHHHhhcccCCCceEEE
Confidence 356799999999999999998764 358999999999999999987653 25899999999987554556899999
Q ss_pred EEcCCCCCCCcccc-chHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQEL-FEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l-~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++|......+..+. ....+++.++++|||||+|++.
T Consensus 133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 98644321111111 1235799999999999999864
No 36
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.52 E-value=5.7e-14 Score=125.51 Aligned_cols=130 Identities=18% Similarity=0.154 Sum_probs=93.8
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhcccccc--CCCCCCCeEEEEcChHHHHHh-CCCCCcc
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVA--VGFEDPRVTLHIGDGVAFLKA-VPEGTYD 202 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~--~~~~~~~v~v~~~D~~~~l~~-~~~~~fD 202 (319)
+..+|||||||+|.++..+++..+..+|++||+++.+++.|++++.... ......+++++.+|+.+++.. .++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 4568999999999999999988777899999999999999987654210 001235899999999875432 3468899
Q ss_pred EEEEcCCCCCCC----ccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHH
Q 020933 203 AVIVDSSDPIGP----AQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCR 259 (319)
Q Consensus 203 vIi~D~~~~~~~----~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~ 259 (319)
.|++..++|+.. ..++....+++.+.++|||||.|++.+.. ......+.+.+.
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~----~~~~~~~~~~l~ 182 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV----LELHDWMCTHFE 182 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC----HHHHHHHHHHHH
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC----HHHHHHHHHHHH
Confidence 999887776532 23344568999999999999999987643 234444444444
No 37
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.52 E-value=1.6e-13 Score=128.81 Aligned_cols=148 Identities=16% Similarity=0.171 Sum_probs=101.1
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC--CCCCccE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~--~~~~fDv 203 (319)
++.+|||+|||+|.++..+++.. .+|++||+|+.+++.+++++... ++.+.+++++++|+.+++... ..++||+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~--gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~ 228 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLA--GLEQAPIRWICEDAMKFIQREERRGSTYDI 228 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHH--TCTTSCEEEECSCHHHHHHHHHHHTCCBSE
T ss_pred CCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECcHHHHHHHHHhcCCCceE
Confidence 45799999999999999999874 38999999999999999998765 333336999999999987532 1468999
Q ss_pred EEEcCCC-CCCCcccc-----chHHHHHHHHHhcCCCcEEEEec-CCcccChHHHHHHHHHHHhhcCCceeEeEEeeccc
Q 020933 204 VIVDSSD-PIGPAQEL-----FEKPFFESVAKALRPGGVVSTQA-ESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTY 276 (319)
Q Consensus 204 Ii~D~~~-~~~~~~~l-----~~~~f~~~~~~~LkpgG~lv~~~-~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~ 276 (319)
|++|++. .......+ ...++++.+.++|+|||++++.. .+.....+.+..+++.........+......+|..
T Consensus 229 Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~~~e~~~p~~ 308 (332)
T 2igt_A 229 ILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVASGELVIREA 308 (332)
T ss_dssp EEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEEEEEEEEECC
T ss_pred EEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEEEEEEecccC
Confidence 9998763 11111101 13478999999999999966544 33333445555555533322222343334455654
Q ss_pred C
Q 020933 277 P 277 (319)
Q Consensus 277 ~ 277 (319)
.
T Consensus 309 ~ 309 (332)
T 2igt_A 309 G 309 (332)
T ss_dssp C
T ss_pred C
Confidence 3
No 38
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.52 E-value=1.9e-13 Score=123.16 Aligned_cols=148 Identities=11% Similarity=0.058 Sum_probs=103.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~fDv 203 (319)
..+.+|||||||+|..+..++...+..+|++||+++.+++.++++.... ++ .+++++++|+.++... ...++||+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~l--~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVL--GL--KGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--TC--SSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh--CC--CceEEEECcHHHhhcccccCCCceE
Confidence 4567999999999999999998767789999999999999999988765 22 3699999999887532 11478999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhh-cCCceeEeEEeecccCCCee-
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI-FKGSVNYAWTTVPTYPRTFL- 281 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~~v~~~~~~vP~~~~g~~- 281 (319)
|++..... ...+++.+.++|||||.+++..+.. ..+.+..+.+.++.. | .........+|.......
T Consensus 155 I~s~a~~~--------~~~ll~~~~~~LkpgG~l~~~~g~~--~~~e~~~~~~~l~~~G~-~~~~~~~~~~p~~~~~R~l 223 (249)
T 3g89_A 155 AVARAVAP--------LCVLSELLLPFLEVGGAAVAMKGPR--VEEELAPLPPALERLGG-RLGEVLALQLPLSGEARHL 223 (249)
T ss_dssp EEEESSCC--------HHHHHHHHGGGEEEEEEEEEEECSC--CHHHHTTHHHHHHHHTE-EEEEEEEEECTTTCCEEEE
T ss_pred EEECCcCC--------HHHHHHHHHHHcCCCeEEEEEeCCC--cHHHHHHHHHHHHHcCC-eEEEEEEeeCCCCCCcEEE
Confidence 99865421 3578999999999999988754321 223344444444433 3 123333335665443333
Q ss_pred EEEEcC
Q 020933 282 PSCSAV 287 (319)
Q Consensus 282 ~~~S~~ 287 (319)
++..+.
T Consensus 224 ~~~~k~ 229 (249)
T 3g89_A 224 VVLEKT 229 (249)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 444443
No 39
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.52 E-value=1.2e-13 Score=119.72 Aligned_cols=120 Identities=18% Similarity=0.142 Sum_probs=94.2
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.+++++... + -++++++.+|+.+.+.. .++||+|
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~--~~~v~~~~~d~~~~~~~--~~~~D~i 112 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF--V--ARNVTLVEAFAPEGLDD--LPDPDRV 112 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH--T--CTTEEEEECCTTTTCTT--SCCCSEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh--C--CCcEEEEeCChhhhhhc--CCCCCEE
Confidence 4567999999999999999999877789999999999999999988765 2 25899999998776542 3679999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhh
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 261 (319)
+++.... ....+++.+.++|+|||.+++.... ......+.+.+++.
T Consensus 113 ~~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~----~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 113 FIGGSGG-------MLEEIIDAVDRRLKSEGVIVLNAVT----LDTLTKAVEFLEDH 158 (204)
T ss_dssp EESCCTT-------CHHHHHHHHHHHCCTTCEEEEEECB----HHHHHHHHHHHHHT
T ss_pred EECCCCc-------CHHHHHHHHHHhcCCCeEEEEEecc----cccHHHHHHHHHHC
Confidence 9876543 2457999999999999999986432 23444455555443
No 40
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.52 E-value=3.3e-14 Score=131.00 Aligned_cols=103 Identities=15% Similarity=0.272 Sum_probs=83.3
Q ss_pred CCCCCceeeEeeccccHHHHH-HHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCc
Q 020933 123 SIPNPKKVLVIGGGDGGVLRE-VSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 123 ~~~~~~~VL~IG~G~G~~~~~-l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
....+.+|||||||+|+++.. +++. +..+|++||+|+++++.|++++... ++ .+++++++|+.++. +++|
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~--gl--~~v~~v~gDa~~l~----d~~F 189 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGL--GV--DGVNVITGDETVID----GLEF 189 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHH--TC--CSEEEEESCGGGGG----GCCC
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhc--CC--CCeEEEECchhhCC----CCCc
Confidence 456788999999999876644 5554 3579999999999999999998765 33 58999999998862 5789
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+|+++...+ ...++++.+.++|||||++++..
T Consensus 190 DvV~~~a~~~-------d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 190 DVLMVAALAE-------PKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp SEEEECTTCS-------CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEECCCcc-------CHHHHHHHHHHHcCCCcEEEEEc
Confidence 9999865421 14579999999999999999875
No 41
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.51 E-value=2.6e-13 Score=115.55 Aligned_cols=110 Identities=14% Similarity=0.139 Sum_probs=82.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+.+.+|||||||+|..+..+++. ..+|+++|+|+.+++.|++++... ++ ++++++++|...+... .+++||+|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~--~~--~~v~~~~~~~~~l~~~-~~~~fD~v 93 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDL--GI--ENTELILDGHENLDHY-VREPIRAA 93 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHH--TC--CCEEEEESCGGGGGGT-CCSCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc--CC--CcEEEEeCcHHHHHhh-ccCCcCEE
Confidence 45679999999999999999988 478999999999999999998765 22 5899999877664322 36789999
Q ss_pred EEcCC-CCCCCc----cccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSS-DPIGPA----QELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~-~~~~~~----~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+++.. -+.... .......+++.+.++|||||.+++..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 98742 121100 00113467899999999999998864
No 42
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.50 E-value=2.5e-13 Score=114.39 Aligned_cols=105 Identities=18% Similarity=0.183 Sum_probs=84.7
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++..+..+|+++|+++.+++.+++++... +.. .++ ++.+|+.+.+... .++||+|
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~-~~~-~~~~d~~~~~~~~-~~~~D~i 98 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL--GVS-DRI-AVQQGAPRAFDDV-PDNPDVI 98 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT--TCT-TSE-EEECCTTGGGGGC-CSCCSEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh--CCC-CCE-EEecchHhhhhcc-CCCCCEE
Confidence 4567999999999999999998866789999999999999999987654 222 378 8889987766542 3789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+++..... ..+++.+.++|+|||.+++...
T Consensus 99 ~~~~~~~~--------~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 99 FIGGGLTA--------PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp EECC-TTC--------TTHHHHHHHTCCTTCEEEEEEC
T ss_pred EECCcccH--------HHHHHHHHHhcCCCCEEEEEee
Confidence 97654432 3689999999999999998653
No 43
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.50 E-value=5.3e-14 Score=122.39 Aligned_cols=110 Identities=17% Similarity=0.253 Sum_probs=85.2
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCC-ccEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGT-YDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~-fDvI 204 (319)
.+.+|||+|||+|.++..+++.. ..+|++||+|+.+++.|++++... ++..++++++.+|+.+++....+++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~--~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTL--KCSSEQAEVINQSSLDFLKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHT--TCCTTTEEEECSCHHHHTTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHh--CCCccceEEEECCHHHHHHhhccCCCCCEE
Confidence 45799999999999999877764 368999999999999999998754 2222589999999998865322468 9999
Q ss_pred EEcCCCCCCCccccchHHHHHHH--HHhcCCCcEEEEecCC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESV--AKALRPGGVVSTQAES 243 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~--~~~LkpgG~lv~~~~~ 243 (319)
++|.+.... ...++++.+ .++|+|||++++....
T Consensus 130 ~~~~~~~~~-----~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 130 FLDPPFHFN-----LAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp EECCCSSSC-----HHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred EECCCCCCc-----cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 988762211 134678888 5679999999987543
No 44
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.49 E-value=6e-14 Score=125.84 Aligned_cols=105 Identities=18% Similarity=0.341 Sum_probs=86.5
Q ss_pred CCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC----CCCC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV----PEGT 200 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~----~~~~ 200 (319)
++++|||||||+|..+..+++..+ ..+|++||+++.+++.|++++... ++ .++++++++|+.+++... ..++
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~gda~~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA--KQ-EHKIKLRLGPALDTLHSLLNEGGEHQ 136 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT--TC-TTTEEEEESCHHHHHHHHHHHHCSSC
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHhhccCCCC
Confidence 578999999999999999998643 679999999999999999998764 32 258999999999887542 1378
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
||+|++|.... ....+++.+.++|+|||++++.
T Consensus 137 fD~V~~d~~~~-------~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 137 FDFIFIDADKT-------NYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEEEEESCGG-------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeEEEEcCChH-------HhHHHHHHHHHhcCCCeEEEEE
Confidence 99999986521 1457899999999999999985
No 45
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.49 E-value=1.1e-13 Score=121.81 Aligned_cols=108 Identities=20% Similarity=0.246 Sum_probs=84.8
Q ss_pred CCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCC----CC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE----GT 200 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~----~~ 200 (319)
++++|||||||+|..+..+++.. +..+|++||+++.+++.|++++... ++ ..+++++++|+.+++..... ++
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA--GL-QDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TC-GGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc--CC-CCceEEEECCHHHHHHHHHHhcCCCc
Confidence 56899999999999999999853 3679999999999999999988765 22 24799999999988765422 68
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
||+|++|....... ...++++.+ ++|||||++++..
T Consensus 135 fD~V~~d~~~~~~~----~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 135 LDMVFLDHWKDRYL----PDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp CSEEEECSCGGGHH----HHHHHHHHT-TCCCTTCEEEESC
T ss_pred eEEEEEcCCcccch----HHHHHHHhc-cccCCCeEEEEeC
Confidence 99999986432111 122466666 9999999999864
No 46
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.49 E-value=5.8e-14 Score=123.32 Aligned_cols=106 Identities=20% Similarity=0.374 Sum_probs=86.6
Q ss_pred CCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCC----CC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE----GT 200 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~----~~ 200 (319)
++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++... +. ..+++++++|+.+++..... ++
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA--GL-SDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC--CC-CCceEEEeCCHHHHHHHhhhccCCCC
Confidence 567999999999999999998644 689999999999999999998654 22 24799999999887654311 78
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
||+|++|.... ....+++.+.++|+|||++++..
T Consensus 141 fD~v~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 141 YDLIYIDADKA-------NTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccEEEECCCHH-------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 99999876421 14578999999999999998863
No 47
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.48 E-value=5.4e-14 Score=118.96 Aligned_cols=109 Identities=17% Similarity=0.181 Sum_probs=86.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+++++... ++ .++++++.+|+.+++... .++||+|
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~-~~~fD~i 104 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMT--KA-ENRFTLLKMEAERAIDCL-TGRFDLV 104 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTT--TC-GGGEEEECSCHHHHHHHB-CSCEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHc--CC-CCceEEEECcHHHhHHhh-cCCCCEE
Confidence 35679999999999999999987 4579999999999999999988654 22 247999999999977654 5679999
Q ss_pred EEcCCCCCCCccccchHHHHHHHH--HhcCCCcEEEEecCC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVA--KALRPGGVVSTQAES 243 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~--~~LkpgG~lv~~~~~ 243 (319)
+++.+... ....++++.+. ++|+|||++++....
T Consensus 105 ~~~~~~~~-----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 105 FLDPPYAK-----ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp EECCSSHH-----HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EECCCCCc-----chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 98754210 11346677776 999999999987643
No 48
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.48 E-value=7.1e-14 Score=120.91 Aligned_cols=131 Identities=13% Similarity=0.170 Sum_probs=78.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh--CCCCCcc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA--VPEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~--~~~~~fD 202 (319)
.++.+|||+|||+|.++..+++..+..+++++|+|+.+++.+++++... .. +++++++|+.+.+.. ...++||
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~-~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF----GA-VVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh----CC-ceEEEEcchHhhhhhhhhccCccc
Confidence 4678999999999999999999876679999999999999999988754 22 789999999886653 0137899
Q ss_pred EEEEcCCCCCCCc-----ccc-----------------chHHHHHHHHHhcCCCcE-EEEecCCcccChHHHHHHHHHHH
Q 020933 203 AVIVDSSDPIGPA-----QEL-----------------FEKPFFESVAKALRPGGV-VSTQAESIWLHMHIIEDIVANCR 259 (319)
Q Consensus 203 vIi~D~~~~~~~~-----~~l-----------------~~~~f~~~~~~~LkpgG~-lv~~~~~~~~~~~~~~~~~~~l~ 259 (319)
+|++|.+...... ... ....+++.+.++|||||+ +++... +...+.+..+++.++
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~~ 181 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG--HNQADEVARLFAPWR 181 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT--TSCHHHHHHHTGGGG
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC--CccHHHHHHHHHHhh
Confidence 9999765421110 000 015788889999999999 666542 233444444444334
Q ss_pred hhc
Q 020933 260 QIF 262 (319)
Q Consensus 260 ~~F 262 (319)
..|
T Consensus 182 ~gf 184 (215)
T 4dzr_A 182 ERG 184 (215)
T ss_dssp GGT
T ss_pred cCC
Confidence 446
No 49
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.48 E-value=5.5e-13 Score=116.31 Aligned_cols=117 Identities=17% Similarity=0.169 Sum_probs=90.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++. ..+|++||+++.+++.|++++... +.. .+++++.+|+.+.+.. .+.||+|
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~--g~~-~~v~~~~~d~~~~~~~--~~~~D~v 126 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTY--GLS-PRMRAVQGTAPAALAD--LPLPEAV 126 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT--TCT-TTEEEEESCTTGGGTT--SCCCSEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc--CCC-CCEEEEeCchhhhccc--CCCCCEE
Confidence 45679999999999999999988 478999999999999999987654 222 2899999999886543 3579999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhh
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 261 (319)
+++... ... +++.+.++|||||.+++.... .+....+.+.+++.
T Consensus 127 ~~~~~~--------~~~-~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~~ 170 (204)
T 3njr_A 127 FIGGGG--------SQA-LYDRLWEWLAPGTRIVANAVT----LESETLLTQLHARH 170 (204)
T ss_dssp EECSCC--------CHH-HHHHHHHHSCTTCEEEEEECS----HHHHHHHHHHHHHH
T ss_pred EECCcc--------cHH-HHHHHHHhcCCCcEEEEEecC----cccHHHHHHHHHhC
Confidence 977522 133 899999999999999987533 34445555555543
No 50
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.47 E-value=3.2e-13 Score=119.96 Aligned_cols=106 Identities=21% Similarity=0.380 Sum_probs=86.1
Q ss_pred CCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCC--C--CC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP--E--GT 200 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~--~--~~ 200 (319)
++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+++...+ + ++
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~-~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA--GV-AEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TC-GGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 567999999999999999998644 579999999999999999988654 22 2479999999988765431 2 78
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
||+|++|...+ ....+++.+.++|+|||++++..
T Consensus 149 fD~V~~d~~~~-------~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 149 FDLIFIDADKR-------NYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEEECSCGG-------GHHHHHHHHHHTEEEEEEEEEEC
T ss_pred cCEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEeC
Confidence 99999886421 13578999999999999999863
No 51
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.46 E-value=4.1e-13 Score=118.15 Aligned_cols=105 Identities=20% Similarity=0.394 Sum_probs=85.9
Q ss_pred CCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCC--C--CC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP--E--GT 200 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~--~--~~ 200 (319)
++++|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++... +. ..+++++.+|+.+.+.... . ++
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~-~~~i~~~~~d~~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA--EA-EHKIDLRLKPALETLDELLAAGEAGT 145 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT--TC-TTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--CC-CCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence 568999999999999999998643 679999999999999999998654 22 2589999999988765321 1 68
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
||+|++|.... ....+++.+.++|+|||++++.
T Consensus 146 ~D~v~~d~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 146 FDVAVVDADKE-------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEEEECSCST-------THHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 99999986521 1357899999999999999985
No 52
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.46 E-value=4.4e-13 Score=128.26 Aligned_cols=130 Identities=12% Similarity=0.096 Sum_probs=95.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC--CCCCcc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~--~~~~fD 202 (319)
..+++|||+|||+|.++..+++.. ..+|++||+++.+++.|++++..+ ++.+.+++++++|+.+++... ..++||
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n--~~~~~~v~~~~~D~~~~l~~~~~~~~~fD 287 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEAN--HLDMANHQLVVMDVFDYFKYARRHHLTYD 287 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHT--TCCCTTEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHHhCCCcc
Confidence 356799999999999999999863 468999999999999999998765 333238999999999987542 145899
Q ss_pred EEEEcCCCCC---CCccc--cchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHH
Q 020933 203 AVIVDSSDPI---GPAQE--LFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVAN 257 (319)
Q Consensus 203 vIi~D~~~~~---~~~~~--l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 257 (319)
+|++|++... ..... -...++++.+.++|+|||++++.+++.....+.+..+++.
T Consensus 288 ~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~ 347 (385)
T 2b78_A 288 IIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEK 347 (385)
T ss_dssp EEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHH
Confidence 9999976521 11011 1123467788999999999999887665555554444443
No 53
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.46 E-value=6.1e-14 Score=119.14 Aligned_cols=109 Identities=16% Similarity=0.136 Sum_probs=84.7
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC--CCCCccE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~--~~~~fDv 203 (319)
.+.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+++++... ++ .++++++.+|+.+++... ..++||+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAIT--KE-PEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHH--TC-GGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHh--CC-CcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 5679999999999999998886 4578999999999999999988654 21 247999999998876431 1478999
Q ss_pred EEEcCCCCCCCccccchHHHHHHH--HHhcCCCcEEEEecCC
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESV--AKALRPGGVVSTQAES 243 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~--~~~LkpgG~lv~~~~~ 243 (319)
|+++.+.... ...++++.+ .++|+|||++++....
T Consensus 120 i~~~~~~~~~-----~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 120 VLLDPPYAKQ-----EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEECCCGGGC-----CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EEECCCCCch-----hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 9988652111 134667777 8889999999987543
No 54
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.45 E-value=2e-13 Score=120.19 Aligned_cols=127 Identities=20% Similarity=0.242 Sum_probs=92.2
Q ss_pred CCCceeeEeecc-ccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGG-DGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G-~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
+++.+||||||| +|.++..+++.. ..+|+++|+|+.+++.+++++... . .+++++++|+..+.. .++++||+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~-~~v~~~~~d~~~~~~-~~~~~fD~ 126 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERN----N-SNVRLVKSNGGIIKG-VVEGTFDV 126 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHT----T-CCCEEEECSSCSSTT-TCCSCEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHh----C-CCcEEEeCCchhhhh-cccCceeE
Confidence 466899999999 999999999874 478999999999999999988765 2 279999999753322 23578999
Q ss_pred EEEcCCCCCCCc---------------cccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhh
Q 020933 204 VIVDSSDPIGPA---------------QELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (319)
Q Consensus 204 Ii~D~~~~~~~~---------------~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 261 (319)
|+++++...... .......+++.+.++|||||.+++...+ .......+.+.+++.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~~~l~~~ 196 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD---KEKLLNVIKERGIKL 196 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES---CHHHHHHHHHHHHHT
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc---cHhHHHHHHHHHHHc
Confidence 998865322111 0011267899999999999999986432 224455566666554
No 55
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.45 E-value=1.3e-12 Score=114.07 Aligned_cols=110 Identities=23% Similarity=0.216 Sum_probs=82.5
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCC---CCCeEEEEcChHHHHHhCCCCCcc
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE---DPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~---~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
++.+|||||||+|.++..+++..+..+|++||+|+.+++.+++++... ++. .++++++.+|+..... +.++||
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~~~--~~~~fD 104 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID--RLPEMQRKRISLFQSSLVYRDK--RFSGYD 104 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG--GSCHHHHTTEEEEECCSSSCCG--GGTTCS
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh--ccccccCcceEEEeCccccccc--ccCCCC
Confidence 567999999999999999998876679999999999999999987643 111 1389999999743221 247899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|++...-...+.. ....+++.+.++|||||++++..
T Consensus 105 ~V~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 105 AATVIEVIEHLDEN--RLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EEEEESCGGGCCHH--HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEEEHHHHHhCCHH--HHHHHHHHHHHhhCCCEEEEEcc
Confidence 99974332211111 12478999999999999877653
No 56
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.45 E-value=2.3e-13 Score=118.41 Aligned_cols=106 Identities=14% Similarity=0.128 Sum_probs=83.8
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
.+.+|||+|||+|.++..+++.. ..+|++||+|+.+++.+++++... ++ ++++++++|+.+++... .++||+|+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~--~~--~~v~~~~~D~~~~~~~~-~~~fD~V~ 127 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATL--KA--GNARVVNSNAMSFLAQK-GTPHNIVF 127 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHT--TC--CSEEEECSCHHHHHSSC-CCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHc--CC--CcEEEEECCHHHHHhhc-CCCCCEEE
Confidence 45799999999999999877764 358999999999999999988754 22 58999999999887542 57899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHH--hcCCCcEEEEecC
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAK--ALRPGGVVSTQAE 242 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~--~LkpgG~lv~~~~ 242 (319)
+|.+.... ...++++.+.+ +|+|||++++...
T Consensus 128 ~~~p~~~~-----~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 128 VDPPFRRG-----LLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp ECCSSSTT-----THHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ECCCCCCC-----cHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 88662211 13467777765 5999999998754
No 57
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.45 E-value=1.7e-12 Score=113.90 Aligned_cols=105 Identities=12% Similarity=0.096 Sum_probs=77.5
Q ss_pred CCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHH--hCCCCCc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLK--AVPEGTY 201 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~--~~~~~~f 201 (319)
..++.+|||||||+|..+..+++..+..+|++||+++.+++.+.+.... ..++.++.+|+..... .. .++|
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~------~~~v~~~~~d~~~~~~~~~~-~~~f 127 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE------RNNIIPLLFDASKPWKYSGI-VEKV 127 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH------CSSEEEECSCTTCGGGTTTT-CCCE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc------CCCeEEEEcCCCCchhhccc-ccce
Confidence 3456799999999999999998875456899999999877655443322 1368889999876421 12 4789
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+|+++...+. ....+++.++++|||||.+++..
T Consensus 128 D~V~~~~~~~~------~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 128 DLIYQDIAQKN------QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEeccChh------HHHHHHHHHHHHhCCCCEEEEEE
Confidence 99999854321 12346899999999999998863
No 58
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.45 E-value=6.4e-13 Score=117.17 Aligned_cols=106 Identities=15% Similarity=0.191 Sum_probs=84.7
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|..+..+++..+..+|+++|+++.+++.+++++... ++++++.+|+.+... .++||+|
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~~---~~~fD~v 113 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN------LKVKYIEADYSKYDF---EEKYDMV 113 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC------TTEEEEESCTTTCCC---CSCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC------CCEEEEeCchhccCC---CCCceEE
Confidence 4568999999999999999998866789999999999999999998653 389999999876532 3789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+. ....++++.++++|||||.+++..
T Consensus 114 ~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 114 VSALSIHHLED--EDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp EEESCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCccccCCH--HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 98643222211 112358999999999999999864
No 59
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.45 E-value=6.7e-13 Score=114.08 Aligned_cols=113 Identities=15% Similarity=0.158 Sum_probs=86.7
Q ss_pred CCCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+.+|||+|||+|..+..+++.. +..+|+++|+++.+++.+++++... +. .++++++++|+.++.... +++||+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~-~~~fD~ 96 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL--NL-IDRVTLIKDGHQNMDKYI-DCPVKA 96 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT--TC-GGGEEEECSCGGGGGGTC-CSCEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCCeEEEECCHHHHhhhc-cCCceE
Confidence 456799999999999999998863 4569999999999999999998654 22 258999999988775433 578999
Q ss_pred EEEcCCC-CCCC----ccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 204 VIVDSSD-PIGP----AQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 204 Ii~D~~~-~~~~----~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+++... +... .......++++.+.++|||||++++..
T Consensus 97 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 97 VMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 9987643 2110 000113469999999999999998864
No 60
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.44 E-value=3.7e-13 Score=119.79 Aligned_cols=106 Identities=18% Similarity=0.391 Sum_probs=85.0
Q ss_pred CCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC--------
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-------- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-------- 196 (319)
++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++... +. ..+++++.+|+.+++...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~-~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN--GL-ENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCCEEEEECCHHHHHHHHHhhccccc
Confidence 567999999999999999998744 579999999999999999998654 22 236999999998865422
Q ss_pred -----C-C-CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 197 -----P-E-GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 197 -----~-~-~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+ + ++||+|+++.... ....+++.+.++|+|||++++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKE-------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGG-------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCCHH-------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 1 6899999884321 13478999999999999999864
No 61
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.44 E-value=1e-12 Score=114.73 Aligned_cols=110 Identities=18% Similarity=0.161 Sum_probs=82.9
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCC---CCCeEEEEcChHHHHHhCCCCCcc
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE---DPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~---~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
++.+|||||||+|.++..+++..+..+|+++|+|+.+++.+++++... ++. .++++++.+|+.... . +.++||
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~d~~~~~-~-~~~~fD 104 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRL--RLPRNQWERLQLIQGALTYQD-K-RFHGYD 104 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTC--CCCHHHHTTEEEEECCTTSCC-G-GGCSCS
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHh--cCCcccCcceEEEeCCccccc-c-cCCCcC
Confidence 567999999999999999999866679999999999999999987643 211 138999999974321 1 247899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|++...-...+.. ....+++.++++|||||++++..
T Consensus 105 ~v~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 105 AATVIEVIEHLDLS--RLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EEEEESCGGGCCHH--HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEeeHHHHHcCCHH--HHHHHHHHHHHHcCCCEEEEEcc
Confidence 99975432211111 12578999999999999887654
No 62
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.43 E-value=4.2e-13 Score=120.14 Aligned_cols=119 Identities=24% Similarity=0.317 Sum_probs=93.5
Q ss_pred CCCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
...+.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++... +. ..+++++.+|+.+.+ ++++||
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~---~~~~~D 164 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA--GF-DDRVTIKLKDIYEGI---EEENVD 164 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH--TC-TTTEEEECSCGGGCC---CCCSEE
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc--CC-CCceEEEECchhhcc---CCCCcC
Confidence 345679999999999999999987 66789999999999999999998654 22 246999999988653 357899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhh
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 261 (319)
+|++|..++ ..+++.+.++|+|||.+++...+ ......+.+.+++.
T Consensus 165 ~v~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 165 HVILDLPQP---------ERVVEHAAKALKPGGFFVAYTPC----SNQVMRLHEKLREF 210 (255)
T ss_dssp EEEECSSCG---------GGGHHHHHHHEEEEEEEEEEESS----HHHHHHHHHHHHHT
T ss_pred EEEECCCCH---------HHHHHHHHHHcCCCCEEEEEECC----HHHHHHHHHHHHHc
Confidence 999976543 35799999999999999986533 23445555555544
No 63
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.43 E-value=4.4e-12 Score=111.59 Aligned_cols=104 Identities=21% Similarity=0.193 Sum_probs=82.0
Q ss_pred CCCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHH--HhCCCCC
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL--KAVPEGT 200 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l--~~~~~~~ 200 (319)
...+.+|||+|||+|.++..+++. .+..+|+++|+++.+++.++++.... ++++++.+|+.+.. ... .++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~------~~v~~~~~d~~~~~~~~~~-~~~ 143 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER------RNIVPILGDATKPEEYRAL-VPK 143 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC------TTEEEEECCTTCGGGGTTT-CCC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc------CCCEEEEccCCCcchhhcc-cCC
Confidence 345679999999999999999976 34578999999999999998876532 58999999987642 222 468
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
||+|++|...+. ....+++.+.++|||||.+++.
T Consensus 144 ~D~v~~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 144 VDVIFEDVAQPT------QAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCCCHh------HHHHHHHHHHHhcCCCCEEEEE
Confidence 999998876321 1235699999999999998875
No 64
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.43 E-value=1e-12 Score=119.60 Aligned_cols=140 Identities=14% Similarity=0.189 Sum_probs=98.5
Q ss_pred CCeeEEEEcCeEeecccchh-HHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhc
Q 020933 91 TYGKVLILDGVIQLTERDEC-AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQF 169 (319)
Q Consensus 91 ~~g~~L~ldg~~q~~~~de~-~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~ 169 (319)
.+|..+.++.......++.. ....++..+. .++.+|||||||+|.++..+++..+..+|+++|+|+.+++.++++
T Consensus 77 f~~~~~~~~~~~~ipr~~te~l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n 152 (276)
T 2b3t_A 77 FWSLPLFVSPATLIPRPDTECLVEQALARLP----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRN 152 (276)
T ss_dssp ETTEEEECCTTSCCCCTTHHHHHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHH
T ss_pred ECCceEEeCCCCcccCchHHHHHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH
Confidence 45666665554444433322 2223333322 356799999999999999999766678999999999999999998
Q ss_pred cccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCC-------------Ccccc--------chHHHHHHHH
Q 020933 170 FPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIG-------------PAQEL--------FEKPFFESVA 228 (319)
Q Consensus 170 ~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~-------------~~~~l--------~~~~f~~~~~ 228 (319)
+... ..++++++++|..+.+. .++||+|+++++.... +...+ ....+++.+.
T Consensus 153 ~~~~----~~~~v~~~~~d~~~~~~---~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~ 225 (276)
T 2b3t_A 153 AQHL----AIKNIHILQSDWFSALA---GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSR 225 (276)
T ss_dssp HHHH----TCCSEEEECCSTTGGGT---TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHG
T ss_pred HHHc----CCCceEEEEcchhhhcc---cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHH
Confidence 7654 22479999999887642 4689999988653211 00011 2357889999
Q ss_pred HhcCCCcEEEEec
Q 020933 229 KALRPGGVVSTQA 241 (319)
Q Consensus 229 ~~LkpgG~lv~~~ 241 (319)
++|+|||++++..
T Consensus 226 ~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 226 NALVSGGFLLLEH 238 (276)
T ss_dssp GGEEEEEEEEEEC
T ss_pred HhcCCCCEEEEEE
Confidence 9999999999865
No 65
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.43 E-value=1e-12 Score=117.54 Aligned_cols=117 Identities=20% Similarity=0.246 Sum_probs=89.7
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCC----CCCCCeEEEEcChHHHHHh-CCCCC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG----FEDPRVTLHIGDGVAFLKA-VPEGT 200 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~----~~~~~v~v~~~D~~~~l~~-~~~~~ 200 (319)
++.+|||||||+|.++..+++..+..+|++||+++.+++.+++++...... ..-++++++.+|+.+++.. .+.+.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 457999999999999999998876679999999999999999876532000 0124799999999886643 23578
Q ss_pred ccEEEEcCCCCCCC----ccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 201 YDAVIVDSSDPIGP----AQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 201 fDvIi~D~~~~~~~----~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+|.|++..++++.. ...+...++++.+.++|+|||+|++.+.
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 99999877666532 1233446899999999999999998653
No 66
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.42 E-value=7.2e-13 Score=119.61 Aligned_cols=109 Identities=10% Similarity=-0.030 Sum_probs=80.5
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccc--------cCCC-----CCCCeEEEEcChHHH
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV--------AVGF-----EDPRVTLHIGDGVAF 192 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~--------~~~~-----~~~~v~v~~~D~~~~ 192 (319)
.+.+|||+|||+|..+..+++.. .+|++||+++.+++.|++..... ..++ ...+++++++|+.+.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRG--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTT--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHCC--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 56799999999999999999884 58999999999999998765310 0000 136899999999886
Q ss_pred HHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEE
Q 020933 193 LKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (319)
Q Consensus 193 l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~ 239 (319)
.... .++||+|+....-...+.. ....+++.+.++|||||++++
T Consensus 146 ~~~~-~~~FD~V~~~~~l~~l~~~--~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 146 PRAN-IGKFDRIWDRGALVAINPG--DHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp GGGC-CCCEEEEEESSSTTTSCGG--GHHHHHHHHHHTEEEEEEEEE
T ss_pred Cccc-CCCEEEEEEhhhhhhCCHH--HHHHHHHHHHHHcCCCeEEEE
Confidence 4321 3789999964332222211 135789999999999999864
No 67
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.42 E-value=6.4e-13 Score=114.98 Aligned_cols=102 Identities=12% Similarity=0.042 Sum_probs=83.6
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++.+|||||||+|..+..+++..+..+++++|+++.+++.+++++... ..++++++.+|+.++. +.++||+|+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~---~~~~~D~i~ 137 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL----KLENIEPVQSRVEEFP---SEPPFDGVI 137 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT----TCSSEEEEECCTTTSC---CCSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCeEEEecchhhCC---ccCCcCEEE
Confidence 357999999999999999998766789999999999999999987654 2235999999987754 257899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++.... ...+++.+.++|+|||.+++..+
T Consensus 138 ~~~~~~--------~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 138 SRAFAS--------LNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp CSCSSS--------HHHHHHHHTTSEEEEEEEEEEES
T ss_pred EeccCC--------HHHHHHHHHHhcCCCcEEEEEeC
Confidence 754311 35789999999999999998653
No 68
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.42 E-value=1.2e-13 Score=120.18 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=78.8
Q ss_pred CCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhcccccc----CC----CCCCCeEEEEcChHHHHHh
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVA----VG----FEDPRVTLHIGDGVAFLKA 195 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~----~~----~~~~~v~v~~~D~~~~l~~ 195 (319)
.+.+.+|||+|||+|..+..+++.. .+|++||+|+.+++.|++...... .+ +..++++++++|+.+....
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQG--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHC--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCC--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 3466899999999999999999873 589999999999999998754200 00 0135899999998775321
Q ss_pred CCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEE
Q 020933 196 VPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVS 238 (319)
Q Consensus 196 ~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv 238 (319)
. .++||+|++...-...+.. ....+++.++++|||||.++
T Consensus 98 ~-~~~fD~v~~~~~l~~l~~~--~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 98 D-IGHCAAFYDRAAMIALPAD--MRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp H-HHSEEEEEEESCGGGSCHH--HHHHHHHHHHHHSCSEEEEE
T ss_pred c-CCCEEEEEECcchhhCCHH--HHHHHHHHHHHHcCCCcEEE
Confidence 0 1689999964332211111 13468999999999999833
No 69
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.42 E-value=6.1e-13 Score=115.27 Aligned_cols=106 Identities=16% Similarity=0.234 Sum_probs=84.0
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++.+|||||||+|.++..+++. +..+|+++|+++.+++.+++++... +. .++++++++|+.+.. .++++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~--~~~~~~D~v~ 116 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADA--NL-NDRIQIVQGDVHNIP--IEDNYADLIV 116 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECBTTBCS--SCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhc--cc-cCceEEEEcCHHHCC--CCcccccEEE
Confidence 4459999999999999999988 4579999999999999999987654 22 358999999987642 2367899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+...-.... ....+++.+.++|+|||.+++..
T Consensus 117 ~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 117 SRGSVFFWE----DVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp EESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECchHhhcc----CHHHHHHHHHHhCCCCCEEEEEe
Confidence 864322211 13579999999999999999863
No 70
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.42 E-value=2.4e-13 Score=113.64 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=82.9
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC--CCCCccE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~--~~~~fDv 203 (319)
.+.+|||+|||+|.++..++++.+ +|+++|+|+.+++.+++++... .. +++++++|+.+++... ..++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~----~~-~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRT----GL-GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHH----TC-CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHc----CC-ceEEEeccHHHHHHhhhccCCceEE
Confidence 567999999999999999998853 4999999999999999988765 22 7999999998865432 1348999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHH--HhcCCCcEEEEecCC
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVA--KALRPGGVVSTQAES 243 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~--~~LkpgG~lv~~~~~ 243 (319)
|+++.+.. .. ..++++.+. ++|+|||++++....
T Consensus 114 i~~~~~~~-~~-----~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 114 AFMAPPYA-MD-----LAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp EEECCCTT-SC-----TTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred EEECCCCc-hh-----HHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 99886533 11 235677777 999999999987643
No 71
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.42 E-value=5.2e-13 Score=122.05 Aligned_cols=122 Identities=12% Similarity=0.074 Sum_probs=93.4
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||+|||+|.++..+++.... +|+++|+|+.+++.+++++..+ +.. .+++++++|+.++.. +++||+|
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n--~~~-~~v~~~~~D~~~~~~---~~~fD~V 196 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLN--KVE-DRMSAYNMDNRDFPG---ENIADRI 196 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHT--TCT-TTEEEECSCTTTCCC---CSCEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHc--CCC-ceEEEEECCHHHhcc---cCCccEE
Confidence 34679999999999999999988543 7999999999999999987754 333 469999999988764 5789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCc--ccChHHHHHHHHHHHhh
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI--WLHMHIIEDIVANCRQI 261 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~~~~~l~~~ 261 (319)
++|.+.. ..++++.+.++|+|||++++...++ ......++.+.+.+++.
T Consensus 197 i~~~p~~--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 197 LMGYVVR--------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEY 247 (278)
T ss_dssp EECCCSS--------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHT
T ss_pred EECCchh--------HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHc
Confidence 9976521 2468999999999999999876442 11233445555555543
No 72
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.41 E-value=9.7e-12 Score=109.96 Aligned_cols=104 Identities=14% Similarity=0.164 Sum_probs=82.6
Q ss_pred CCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHH--hCCCCCc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLK--AVPEGTY 201 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~--~~~~~~f 201 (319)
...+.+|||||||+|.++..+++..+..+|++||+++.+++.++++... .++++++.+|+..... .. .++|
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~------~~~v~~~~~d~~~~~~~~~~-~~~~ 144 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE------RENIIPILGDANKPQEYANI-VEKV 144 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT------CTTEEEEECCTTCGGGGTTT-SCCE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc------CCCeEEEECCCCCccccccc-CccE
Confidence 3456799999999999999999875567999999999999999988653 2689999999876321 12 3689
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|+|+.+...+. ....+++.+.+.|||||.+++.
T Consensus 145 D~v~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYEDVAQPN------QAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEECCCSTT------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEecCChh------HHHHHHHHHHHhCCCCcEEEEE
Confidence 99997754321 1356799999999999999884
No 73
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.41 E-value=1.2e-12 Score=113.99 Aligned_cols=105 Identities=14% Similarity=0.188 Sum_probs=83.3
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++... ++++++++|+.++. ++++||+|
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~---~~~~fD~v 118 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRW------SHISWAATDILQFS---TAELFDLI 118 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTC------SSEEEEECCTTTCC---CSCCEEEE
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccC------CCeEEEEcchhhCC---CCCCccEE
Confidence 356799999999999999999874 58999999999999999988643 48999999988764 36899999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+... ....+++.+.++|||||++++..
T Consensus 119 ~~~~~l~~~~~~~-~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 119 VVAEVLYYLEDMT-QMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp EEESCGGGSSSHH-HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEccHHHhCCCHH-HHHHHHHHHHHHcCCCCEEEEEe
Confidence 9864332221110 01467999999999999999864
No 74
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.41 E-value=9.5e-13 Score=118.71 Aligned_cols=107 Identities=16% Similarity=0.140 Sum_probs=85.9
Q ss_pred CCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
.+++.+|||||||+|..+..+++. +..+|+++|+++.+++.+++++... +. .++++++++|+.++. .++++||+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~--~~~~~fD~ 117 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQS--GL-QNRVTGIVGSMDDLP--FRNEELDL 117 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTSCC--CCTTCEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHc--CC-CcCcEEEEcChhhCC--CCCCCEEE
Confidence 346789999999999999999998 5569999999999999999987654 22 257999999987643 23678999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|++...-... ....+++.+.++|||||++++..
T Consensus 118 i~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 118 IWSEGAIYNI-----GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp EEESSCGGGT-----CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEcCCceec-----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 9975432211 24679999999999999999875
No 75
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.41 E-value=1.3e-12 Score=120.24 Aligned_cols=108 Identities=15% Similarity=0.098 Sum_probs=84.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.+++++... ++ ..+++++.+|+.++ +++||+|
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~-----~~~fD~v 141 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEV--DS-PRRKEVRIQGWEEF-----DEPVDRI 141 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHS--CC-SSCEEEEECCGGGC-----CCCCSEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhc--CC-CCceEEEECCHHHc-----CCCccEE
Confidence 4567999999999999999998744 68999999999999999987654 22 24899999998765 5789999
Q ss_pred EEcCCCCCCC-c----cccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGP-A----QELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~-~----~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+ + ..-....+++.+.++|||||+++++.
T Consensus 142 ~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 142 VSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9853321111 1 11123589999999999999999875
No 76
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.40 E-value=8.6e-13 Score=117.85 Aligned_cols=106 Identities=14% Similarity=0.085 Sum_probs=85.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+.+.+|||||||+|..+..+++..+ .+|+++|+++.+++.+++++... +. ..+++++++|+.++. .++++||+|
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~--~~~~~fD~v 118 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKA--NC-ADRVKGITGSMDNLP--FQNEELDLI 118 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHc--CC-CCceEEEECChhhCC--CCCCCEEEE
Confidence 4567999999999999999999865 39999999999999999987654 22 247999999986542 235799999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-... ....+++.+.++|||||++++..
T Consensus 119 ~~~~~l~~~-----~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 119 WSEGAIYNI-----GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp EEESCSCCC-----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EecChHhhc-----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 986443222 14679999999999999999875
No 77
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.40 E-value=2.1e-12 Score=123.19 Aligned_cols=112 Identities=15% Similarity=0.148 Sum_probs=86.4
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCC-CCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE-DPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~-~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.+.+|||||||+|.++..+++..+..+|++||+|+.+++.+++++... +.. ..+++++.+|+.+.+ ++++||+|
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n--gl~~~~~v~~~~~D~~~~~---~~~~fD~I 296 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN--MPEALDRCEFMINNALSGV---EPFRFNAV 296 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--CGGGGGGEEEEECSTTTTC---CTTCEEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc--CCCcCceEEEEechhhccC---CCCCeeEE
Confidence 347999999999999999999877789999999999999999988764 221 236899999988753 35789999
Q ss_pred EEcCCCCCCCc-cccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDSSDPIGPA-QELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~~~~~~~-~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+++.+...... ......++++.+.++|||||++++...
T Consensus 297 i~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 297 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp EECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 99876432211 112234789999999999999998643
No 78
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.39 E-value=4.6e-13 Score=118.51 Aligned_cols=105 Identities=20% Similarity=0.380 Sum_probs=86.4
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCC-CCCccEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP-EGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~-~~~fDvI 204 (319)
++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++... +. ..+++++.+|+.+++.... +++||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL--GL-ESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT--TC-TTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--CC-CCcEEEEECCHHHHHHhcccCCCccEE
Confidence 567999999999999999998766689999999999999999988654 22 2479999999988654321 4689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+++...+ ....+++.+.++|+|||++++.
T Consensus 131 ~~~~~~~-------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 131 FIDAAKG-------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEEGGGS-------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred EECCCHH-------HHHHHHHHHHHHcCCCeEEEEE
Confidence 9876532 2457999999999999999986
No 79
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.39 E-value=2.2e-12 Score=114.49 Aligned_cols=103 Identities=14% Similarity=0.187 Sum_probs=81.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|.++..+++.. .+|+++|+++.+++.+++. ++++.+|+.+++...++++||+|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~------------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEG--IESIGVDINEDMIKFCEGK------------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHT--CCEEEECSCHHHHHHHHTT------------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCC--CcEEEEECCHHHHHHHHhh------------cceeeccHHHHhhhcCCCCeeEE
Confidence 456899999999999999998873 4799999999999998864 67889999988755557899999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
++...-...+.. ....+++.+.++|||||++++...+
T Consensus 106 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 106 MISHFVEHLDPE--RLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEESCGGGSCGG--GHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EECCchhhCCcH--HHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 975332211111 1357999999999999999987643
No 80
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.38 E-value=6.9e-13 Score=114.83 Aligned_cols=101 Identities=14% Similarity=0.161 Sum_probs=81.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|.++..+++. +..+|+++|+++.+++.+++++... + ..+++++.+|+.++. +++||+|
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~--~--~~~v~~~~~d~~~~~----~~~fD~i 129 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALN--G--IYDIALQKTSLLADV----DGKFDLI 129 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHT--T--CCCCEEEESSTTTTC----CSCEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHc--C--CCceEEEeccccccC----CCCceEE
Confidence 45679999999999999998886 4569999999999999999988754 2 224999999987652 5789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+++.... . ...+++.+.++|+|||.+++..
T Consensus 130 ~~~~~~~-----~--~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 130 VANILAE-----I--LLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp EEESCHH-----H--HHHHGGGSGGGEEEEEEEEEEE
T ss_pred EECCcHH-----H--HHHHHHHHHHhcCCCCEEEEEe
Confidence 9875321 1 3578899999999999999853
No 81
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.38 E-value=3.6e-12 Score=107.93 Aligned_cols=120 Identities=19% Similarity=0.279 Sum_probs=92.7
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||+|||+|..+..+++.. .+|+++|+++.+++.+++++... +. .++++++.+|+.+.+.. .++||+|
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~~--~~~~D~v 104 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRH--GL-GDNVTLMEGDAPEALCK--IPDIDIA 104 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHT--TC-CTTEEEEESCHHHHHTT--SCCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHc--CC-CcceEEEecCHHHhccc--CCCCCEE
Confidence 456799999999999999999875 78999999999999999987654 21 25899999998885542 2589999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhh-c
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI-F 262 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F 262 (319)
+++.... . ...+++.+.++|+|||.+++...+ ......+.+.+++. |
T Consensus 105 ~~~~~~~--~-----~~~~l~~~~~~l~~gG~l~~~~~~----~~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 105 VVGGSGG--E-----LQEILRIIKDKLKPGGRIIVTAIL----LETKFEAMECLRDLGF 152 (192)
T ss_dssp EESCCTT--C-----HHHHHHHHHHTEEEEEEEEEEECB----HHHHHHHHHHHHHTTC
T ss_pred EECCchH--H-----HHHHHHHHHHhcCCCcEEEEEecC----cchHHHHHHHHHHCCC
Confidence 9875431 1 367999999999999999986532 34445555566544 5
No 82
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=1.5e-11 Score=103.43 Aligned_cols=114 Identities=12% Similarity=0.172 Sum_probs=89.3
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|.++..+++ +..+++++|+++.+++.+++++... + -++++++.+|+.+.+. +++||+|
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~--~--~~~~~~~~~d~~~~~~---~~~~D~i 104 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKF--N--IKNCQIIKGRAEDVLD---KLEFNKA 104 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHT--T--CCSEEEEESCHHHHGG---GCCCSEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHc--C--CCcEEEEECCcccccc---CCCCcEE
Confidence 3567999999999999999998 4579999999999999999988654 2 2579999999988543 4689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhh
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 261 (319)
+++.. .....+++.+.++ |||.+++.... ......+.+.+++.
T Consensus 105 ~~~~~--------~~~~~~l~~~~~~--~gG~l~~~~~~----~~~~~~~~~~l~~~ 147 (183)
T 2yxd_A 105 FIGGT--------KNIEKIIEILDKK--KINHIVANTIV----LENAAKIINEFESR 147 (183)
T ss_dssp EECSC--------SCHHHHHHHHHHT--TCCEEEEEESC----HHHHHHHHHHHHHT
T ss_pred EECCc--------ccHHHHHHHHhhC--CCCEEEEEecc----cccHHHHHHHHHHc
Confidence 98765 1145789999888 99999986532 34455566666654
No 83
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.38 E-value=1e-12 Score=118.80 Aligned_cols=107 Identities=17% Similarity=0.217 Sum_probs=86.6
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|.++..+++..+..+|+++|+++.+++.+++++... ..++++++.+|+.+.. .++++||+|
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~--~~~~~fD~v 109 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN----GIKNVKFLQANIFSLP--FEDSSFDHI 109 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCGGGCC--SCTTCEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc----CCCCcEEEEcccccCC--CCCCCeeEE
Confidence 4678999999999999999998876789999999999999999987654 2357999999988653 236799999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++.......+. ...+++.+.++|||||++++..
T Consensus 110 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 110 FVCFVLEHLQS----PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEechhhhcCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 97544322211 3478999999999999999864
No 84
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.38 E-value=8.7e-13 Score=121.22 Aligned_cols=115 Identities=20% Similarity=0.238 Sum_probs=83.1
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCC-----------------------------
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG----------------------------- 176 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~----------------------------- 176 (319)
.+++|||||||+|.++..+++..+..+|++||+|+.+++.|++++......
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 568999999999999999999866679999999999999999986543100
Q ss_pred --------------------------CCCCCeEEEEcChHHH---HHhCCCCCccEEEEcCCCCCCC-c-cccchHHHHH
Q 020933 177 --------------------------FEDPRVTLHIGDGVAF---LKAVPEGTYDAVIVDSSDPIGP-A-QELFEKPFFE 225 (319)
Q Consensus 177 --------------------------~~~~~v~v~~~D~~~~---l~~~~~~~fDvIi~D~~~~~~~-~-~~l~~~~f~~ 225 (319)
+ ..+++++++|.... +.....++||+|++.....+.+ . ..-....+++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~-p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVF-PNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSST-TTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccc-cccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 0 04899999998632 2222368999999754321110 0 0001357899
Q ss_pred HHHHhcCCCcEEEEec
Q 020933 226 SVAKALRPGGVVSTQA 241 (319)
Q Consensus 226 ~~~~~LkpgG~lv~~~ 241 (319)
.++++|+|||+|++..
T Consensus 205 ~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHHhCCCcEEEEec
Confidence 9999999999999864
No 85
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.37 E-value=1.3e-12 Score=117.30 Aligned_cols=104 Identities=16% Similarity=0.274 Sum_probs=82.4
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++... ..++++++++|+.+.. .++++||+|
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~----~~~~v~~~~~d~~~l~--~~~~~fD~V 107 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGN----GHQQVEYVQGDAEQMP--FTDERFHIV 107 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEECCC-CCC--SCTTCEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEecHHhCC--CCCCCEEEE
Confidence 366799999999999999999875 48999999999999999987643 2357999999987642 236799999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++...-...+. ...+++.++++|||||.+++.
T Consensus 108 ~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 108 TCRIAAHHFPN----PASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEhhhhHhcCC----HHHHHHHHHHHcCCCCEEEEE
Confidence 98643322221 357899999999999999885
No 86
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.37 E-value=1.2e-12 Score=114.46 Aligned_cols=106 Identities=20% Similarity=0.238 Sum_probs=83.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+.+.+|||||||+|.++..+++..+ +|+++|+++.+++.+++++... .++++++++|+.+.. .++++||+|
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~~~D~v 107 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-----ESNVEFIVGDARKLS--FEDKTFDYV 107 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCTTSCC--SCTTCEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-----CCCceEEECchhcCC--CCCCcEEEE
Confidence 3478999999999999999998854 8999999999999999987653 268999999987642 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++........... ...+++.++++|+|||.+++..
T Consensus 108 ~~~~~~~~~~~~~--~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 108 IFIDSIVHFEPLE--LNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp EEESCGGGCCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCchHhCCHHH--HHHHHHHHHHHcCCCcEEEEEe
Confidence 9764411222111 3578999999999999998864
No 87
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.37 E-value=2e-12 Score=117.68 Aligned_cols=107 Identities=20% Similarity=0.338 Sum_probs=84.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+.+.+|||||||+|.++..+++.. .+|++||+++.+++.+++.+... +. .++++++.+|+.+.... .+++||+|
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~-~~~~fD~v 140 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERG--HQVILCDLSAQMIDRAKQAAEAK--GV-SDNMQFIHCAAQDVASH-LETPVDLI 140 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC---CC-GGGEEEEESCGGGTGGG-CSSCEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhc--CC-CcceEEEEcCHHHhhhh-cCCCceEE
Confidence 346799999999999999999883 58999999999999999987654 21 25899999999887533 36899999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+. ...+++.+.++|||||++++..
T Consensus 141 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 141 LFHAVLEWVAD----PRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECchhhcccC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 98543222111 3579999999999999999875
No 88
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.37 E-value=4.6e-12 Score=121.49 Aligned_cols=124 Identities=18% Similarity=0.249 Sum_probs=92.6
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++++|||+|||+|.++..+++.. .+|++||+|+.+++.+++++..+ ++. .++.++|+.+++... .+.||+|+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~n--g~~---~~~~~~D~~~~l~~~-~~~fD~Ii 285 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRL--GLR---VDIRHGEALPTLRGL-EGPFHHVL 285 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH--TCC---CEEEESCHHHHHHTC-CCCEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHh--CCC---CcEEEccHHHHHHHh-cCCCCEEE
Confidence 47899999999999999999874 34999999999999999998765 222 357799999998765 34499999
Q ss_pred EcCCCCCCCcccc-----chHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHH
Q 020933 206 VDSSDPIGPAQEL-----FEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVAN 257 (319)
Q Consensus 206 ~D~~~~~~~~~~l-----~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~ 257 (319)
+|++.-....... ...++++.+.++|+|||++++.+++.....+.+...++.
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~ 342 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARR 342 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHH
Confidence 9976422111111 124688889999999999998777665555555544443
No 89
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.37 E-value=3.2e-12 Score=116.49 Aligned_cols=123 Identities=11% Similarity=-0.003 Sum_probs=94.2
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.+..+|||+|||+|.++..+++..+..+|++||+++.+++.+++++..+ + -.+++++.+|+.++ .. .++||+|
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n--~--l~~~~~~~~d~~~~-~~--~~~~D~V 190 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLN--K--LNNVIPILADNRDV-EL--KDVADRV 190 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHT--T--CSSEEEEESCGGGC-CC--TTCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--C--CCCEEEEECChHHc-Cc--cCCceEE
Confidence 4567999999999999999998865679999999999999999988765 2 24789999999887 32 5789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCccc-ChHHHHHHHHHHHhhc
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWL-HMHIIEDIVANCRQIF 262 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~-~~~~~~~~~~~l~~~F 262 (319)
++|.+. ...++++.+.+.|+|||++++....... ..+...+.++.+.+.+
T Consensus 191 i~d~p~--------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~ 241 (272)
T 3a27_A 191 IMGYVH--------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKN 241 (272)
T ss_dssp EECCCS--------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHT
T ss_pred EECCcc--------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHh
Confidence 998754 1346899999999999999876532211 1134555566666544
No 90
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.37 E-value=2e-12 Score=112.24 Aligned_cols=101 Identities=23% Similarity=0.300 Sum_probs=81.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|..+..+++. ..+|+++|+++.+++.+++++... ..++++++.+|+.+.... .++||+|
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~--~~~~D~i 147 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNL----DLHNVSTRHGDGWQGWQA--RAPFDAI 147 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHT----TCCSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc----CCCceEEEECCcccCCcc--CCCccEE
Confidence 46789999999999999999988 378999999999999999988754 234799999998875432 4789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
+++...+..+ +.+.+.|||||++++....
T Consensus 148 ~~~~~~~~~~----------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 148 IVTAAPPEIP----------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESSBCSSCC----------THHHHTEEEEEEEEEEECS
T ss_pred EEccchhhhh----------HHHHHhcccCcEEEEEEcC
Confidence 9876543322 2578899999999987643
No 91
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.37 E-value=1.6e-12 Score=116.25 Aligned_cols=107 Identities=18% Similarity=0.230 Sum_probs=84.2
Q ss_pred CCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..++.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++.+... ++++++++|+.+.. .++++||+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~--~~~~~fD~ 123 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN------NKIIFEANDILTKE--FPENNFDL 123 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC------TTEEEEECCTTTCC--CCTTCEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC------CCeEEEECccccCC--CCCCcEEE
Confidence 3456799999999999999999864 368999999999999999987642 68999999987652 23689999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|++...-...+.. ....+++.+.++|||||.+++..
T Consensus 124 v~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 124 IYSRDAILALSLE--NKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EEEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeHHHHHHhcChH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 9975432221111 14578999999999999999875
No 92
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.37 E-value=8.1e-13 Score=118.00 Aligned_cols=100 Identities=15% Similarity=0.170 Sum_probs=79.6
Q ss_pred CCceeeEeeccccHHHHHHHhc----CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH--HHhCCCC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH----SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF--LKAVPEG 199 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~----~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~--l~~~~~~ 199 (319)
++.+|||||||+|..+..+++. .+..+|++||+++.+++.|+.. .++++++++|+.++ +....+.
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~---------~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASD---------MENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGG---------CTTEEEEECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhcc---------CCceEEEECcchhHHHHHhhccC
Confidence 4579999999999999999886 4568999999999999888721 25899999999875 3322234
Q ss_pred CccEEEEcCCCCCCCccccchHHHHHHHHH-hcCCCcEEEEec
Q 020933 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAK-ALRPGGVVSTQA 241 (319)
Q Consensus 200 ~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~-~LkpgG~lv~~~ 241 (319)
+||+|++|.... ....+++.+.+ +|||||+|++..
T Consensus 152 ~fD~I~~d~~~~-------~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAHA-------NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSCS-------SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCCEEEECCchH-------hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 799999987521 24578999997 999999999864
No 93
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.36 E-value=9.4e-13 Score=116.97 Aligned_cols=107 Identities=15% Similarity=0.210 Sum_probs=83.0
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++.+|||||||+|.++..+++.. ..+|+++|+++.+++.+++++... ...+++++.+|+.++. .++++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~--~~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEE----GKRVRNYFCCGLQDFT--PEPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGG----GGGEEEEEECCGGGCC--CCSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhc----CCceEEEEEcChhhcC--CCCCCEEEEE
Confidence 47899999999999999998875 468999999999999999988653 1347999999977653 2256899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++..-...+... ...+++.+.++|+|||++++..
T Consensus 152 ~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 152 IQWVIGHLTDQH--LAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp EESCGGGSCHHH--HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhhCCHHH--HHHHHHHHHHhcCCCeEEEEEE
Confidence 864322221111 2478999999999999998853
No 94
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.36 E-value=5.6e-12 Score=114.90 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=89.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC--CCCCc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~--~~~~f 201 (319)
..+.+|||+|||+|+.+..+++..+ ..+|+++|+++.+++.+++++... + -++++++++|+.++.... ..++|
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~--g--~~~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM--G--VLNTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT--T--CCSEEEEESCHHHHHHHHHHTTCCE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh--C--CCcEEEEeCChHhcchhhhhccccC
Confidence 3567999999999999999988543 378999999999999999988765 2 248999999998875421 14689
Q ss_pred cEEEEcCCCCC-CCcc-------------ccchHHHHHHHHHhcCCCcEEEEecCCcc
Q 020933 202 DAVIVDSSDPI-GPAQ-------------ELFEKPFFESVAKALRPGGVVSTQAESIW 245 (319)
Q Consensus 202 DvIi~D~~~~~-~~~~-------------~l~~~~f~~~~~~~LkpgG~lv~~~~~~~ 245 (319)
|+|++|++... +.-. .-...++++.+.+.|||||.+++.+++..
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 99999865421 1100 01236789999999999999999876643
No 95
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.36 E-value=3.1e-12 Score=117.43 Aligned_cols=151 Identities=13% Similarity=0.217 Sum_probs=102.4
Q ss_pred CCccEEEEEecCCeeEEEEcCeEeecccchhHH-HHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEEC
Q 020933 80 DYQNVMVFQSSTYGKVLILDGVIQLTERDECAY-QEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEI 158 (319)
Q Consensus 80 ~yq~i~v~~~~~~g~~L~ldg~~q~~~~de~~Y-~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEi 158 (319)
|.|+|. -+...+|..+.++.......++.... ...+..+.. ..+.+|||||||+|.++..+++. +..+|+++|+
T Consensus 80 p~~yi~-g~~~f~~~~~~v~~~~lipr~~te~lv~~~l~~~~~---~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDi 154 (284)
T 1nv8_A 80 PLHYIL-GEKEFMGLSFLVEEGVFVPRPETEELVELALELIRK---YGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDV 154 (284)
T ss_dssp CHHHHH-TEEEETTEEEECCTTSCCCCTTHHHHHHHHHHHHHH---HTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEES
T ss_pred CCeEEe-eeeEECCeEEEeCCCceecChhHHHHHHHHHHHhcc---cCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEEC
Confidence 455552 22344666676665444444443222 223332211 14569999999999999999988 7789999999
Q ss_pred ChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCc---cEEEEcCCCCCC-----------Cccccc----h
Q 020933 159 DKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY---DAVIVDSSDPIG-----------PAQELF----E 220 (319)
Q Consensus 159 d~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~f---DvIi~D~~~~~~-----------~~~~l~----~ 220 (319)
|+.+++.|++++... ++. .+++++++|..+.+. ++| |+|++|++.... +...++ .
T Consensus 155 s~~al~~A~~n~~~~--~l~-~~v~~~~~D~~~~~~----~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dg 227 (284)
T 1nv8_A 155 SSKAVEIARKNAERH--GVS-DRFFVRKGEFLEPFK----EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDG 227 (284)
T ss_dssp CHHHHHHHHHHHHHT--TCT-TSEEEEESSTTGGGG----GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTS
T ss_pred CHHHHHHHHHHHHHc--CCC-CceEEEECcchhhcc----cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcH
Confidence 999999999987654 222 369999999988653 468 999998543210 000000 1
Q ss_pred HHHHHHHH-HhcCCCcEEEEecC
Q 020933 221 KPFFESVA-KALRPGGVVSTQAE 242 (319)
Q Consensus 221 ~~f~~~~~-~~LkpgG~lv~~~~ 242 (319)
.++++.+. +.|+|||++++..+
T Consensus 228 l~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 228 LDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp CHHHHHHHHHCCCTTCEEEEECC
T ss_pred HHHHHHHHHhcCCCCCEEEEEEC
Confidence 26899999 99999999998653
No 96
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.36 E-value=2.8e-12 Score=116.99 Aligned_cols=108 Identities=13% Similarity=0.151 Sum_probs=86.5
Q ss_pred CCCCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
..++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++... ..+++++++|+.++. . +++||
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~--~-~~~fD 91 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-----PYDSEFLEGDATEIE--L-NDKYD 91 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-----SSEEEEEESCTTTCC--C-SSCEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcchhhcC--c-CCCee
Confidence 34678999999999999999998755 479999999999999999987654 248999999988753 2 46899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
+|++...-...+ ....+++.++++|||||.+++...+
T Consensus 92 ~v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 92 IAICHAFLLHMT----TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEEESCGGGCS----SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECChhhcCC----CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 999865422211 1357999999999999999987644
No 97
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.36 E-value=2.8e-12 Score=114.43 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=83.0
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
.+.+|||||||+|..+..+++... .+|+++|+++.+++.+++.+. .++++++.+|+.+.. .++++||+|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~--~~~~~fD~v~ 113 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT-------SPVVCYEQKAIEDIA--IEPDAYNVVL 113 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC-------CTTEEEEECCGGGCC--CCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc-------cCCeEEEEcchhhCC--CCCCCeEEEE
Confidence 568999999999999999998853 489999999999999999875 358999999987642 2368999999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+...-.... ....+++.++++|||||.+++...
T Consensus 114 ~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 114 SSLALHYIA----SFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Echhhhhhh----hHHHHHHHHHHHcCCCcEEEEEeC
Confidence 754322111 145799999999999999998753
No 98
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.36 E-value=2.6e-12 Score=112.08 Aligned_cols=112 Identities=15% Similarity=0.205 Sum_probs=85.2
Q ss_pred HHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH
Q 020933 112 YQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA 191 (319)
Q Consensus 112 Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~ 191 (319)
|.+++..+.. .++.+|||||||+|.++..+++.. .+|+++|+++.+++.+++.++ .+++++.+|+.+
T Consensus 34 ~~~~l~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--------~~~~~~~~d~~~ 100 (220)
T 3hnr_A 34 YEDILEDVVN---KSFGNVLEFGVGTGNLTNKLLLAG--RTVYGIEPSREMRMIAKEKLP--------KEFSITEGDFLS 100 (220)
T ss_dssp HHHHHHHHHH---TCCSEEEEECCTTSHHHHHHHHTT--CEEEEECSCHHHHHHHHHHSC--------TTCCEESCCSSS
T ss_pred HHHHHHHhhc---cCCCeEEEeCCCCCHHHHHHHhCC--CeEEEEeCCHHHHHHHHHhCC--------CceEEEeCChhh
Confidence 4555555432 256799999999999999999873 689999999999999998864 378899999877
Q ss_pred HHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 192 FLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 192 ~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+. . .++||+|++...-...+.. ....+++.+.++|||||.+++..
T Consensus 101 ~~--~-~~~fD~v~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 101 FE--V-PTSIDTIVSTYAFHHLTDD--EKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp CC--C-CSCCSEEEEESCGGGSCHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred cC--C-CCCeEEEEECcchhcCChH--HHHHHHHHHHHhcCCCCEEEEEe
Confidence 53 2 2789999986433222211 12348999999999999999874
No 99
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.35 E-value=2.1e-12 Score=113.94 Aligned_cols=100 Identities=14% Similarity=0.141 Sum_probs=81.0
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+. . +++++++|+.+.. ++++||+|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~-------~-~v~~~~~d~~~~~---~~~~fD~v~ 108 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLK-------D-GITYIHSRFEDAQ---LPRRYDNIV 108 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSC-------S-CEEEEESCGGGCC---CSSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhh-------C-CeEEEEccHHHcC---cCCcccEEE
Confidence 56799999999999999999875 379999999999999998864 1 7999999988762 368899999
Q ss_pred EcCCCCCCCccccchHHHHHHHH-HhcCCCcEEEEecC
Q 020933 206 VDSSDPIGPAQELFEKPFFESVA-KALRPGGVVSTQAE 242 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~-~~LkpgG~lv~~~~ 242 (319)
+...-...+ ....+++.++ ++|||||.+++...
T Consensus 109 ~~~~l~~~~----~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 109 LTHVLEHID----DPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp EESCGGGCS----SHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EhhHHHhhc----CHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 754321111 1357999999 99999999998763
No 100
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.35 E-value=2e-12 Score=119.69 Aligned_cols=115 Identities=12% Similarity=0.120 Sum_probs=78.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCC--CCCeEEEEcCh------HHHHHhC
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE--DPRVTLHIGDG------VAFLKAV 196 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~--~~~v~v~~~D~------~~~l~~~ 196 (319)
+.+.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|+++......... ..++++++.|+ .+.....
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 346799999999998766665543 46899999999999999998754310000 01367888877 3322223
Q ss_pred CCCCccEEEEcCCCCCC-CccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 197 PEGTYDAVIVDSSDPIG-PAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 197 ~~~~fDvIi~D~~~~~~-~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++++||+|++...-+.. ...+ ...+++.++++|||||+|++.+.
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~--~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRH--YATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTT--HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHH--HHHHHHHHHHHcCCCCEEEEEeC
Confidence 45799999975432211 1112 35899999999999999998754
No 101
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.35 E-value=2.4e-12 Score=110.08 Aligned_cols=104 Identities=14% Similarity=0.170 Sum_probs=81.7
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++... ..++++++.+|+.+.. . +++||+|+
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~--~-~~~~D~v~ 102 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANG--YDVDAWDKNAMSIANVERIKSIE----NLDNLHTRVVDLNNLT--F-DRQYDFIL 102 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEECCGGGCC--C-CCCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhC----CCCCcEEEEcchhhCC--C-CCCceEEE
Confidence 56799999999999999999873 58999999999999999987654 2247999999987753 2 57899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+...-...+.. ....+++.+.++|+|||.+++.
T Consensus 103 ~~~~l~~~~~~--~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 103 STVVLMFLEAK--TIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp EESCGGGSCGG--GHHHHHHHHHHTEEEEEEEEEE
T ss_pred EcchhhhCCHH--HHHHHHHHHHHhcCCCeEEEEE
Confidence 76443222111 1457899999999999997654
No 102
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.35 E-value=2.3e-12 Score=118.25 Aligned_cols=109 Identities=14% Similarity=0.103 Sum_probs=84.7
Q ss_pred CCCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC----CCC
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV----PEG 199 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~----~~~ 199 (319)
.++.+|||||||+|..+..+++.. +..+|++||+++.+++.+++++... ....++++++++|+.++.... ..+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 112 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS--PDTYKNVSFKISSSDDFKFLGADSVDKQ 112 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC--C-CCTTEEEEECCTTCCGGGCTTTTTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc--cCCCCceEEEEcCHHhCCccccccccCC
Confidence 367899999999999999999753 5689999999999999999987542 012468999999987754211 027
Q ss_pred CccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 200 ~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+||+|++...-+.. ....+++.+.++|+|||.+++.
T Consensus 113 ~fD~V~~~~~l~~~-----~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 113 KIDMITAVECAHWF-----DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp CEEEEEEESCGGGS-----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEeHhhHHHHh-----CHHHHHHHHHHhcCCCcEEEEE
Confidence 89999986433222 2468999999999999999874
No 103
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.34 E-value=1.5e-12 Score=113.59 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=85.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+.+|||||||+|.++..+++.. +..+|+++|+++.+++.+++.+... ..++++++.+|+.+.. .++++||+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~~d~~~~~--~~~~~fD~ 109 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL----GLKNVEVLKSEENKIP--LPDNTVDF 109 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEECBTTBCS--SCSSCEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc----CCCcEEEEecccccCC--CCCCCeeE
Confidence 456799999999999999998874 5679999999999999999988654 2247999999987643 23678999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|++...-.... ....+++.+.++|+|||.+++..
T Consensus 110 v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 110 IFMAFTFHELS----EPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp EEEESCGGGCS----SHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeehhhhhcC----CHHHHHHHHHHHhCCCeEEEEEE
Confidence 99754332111 13579999999999999998864
No 104
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.34 E-value=3.1e-12 Score=119.65 Aligned_cols=123 Identities=20% Similarity=0.225 Sum_probs=89.3
Q ss_pred CCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhcccccc-----CCC--CCCCeEEEEcChHHHHHhC
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVA-----VGF--EDPRVTLHIGDGVAFLKAV 196 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~-----~~~--~~~~v~v~~~D~~~~l~~~ 196 (319)
..+.+|||+|||+|.++..+++. .+..+|+++|+++.+++.|++++.... .+. ...+++++.+|+.+.+...
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 45679999999999999999986 455799999999999999999876420 011 1258999999988764323
Q ss_pred CCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHh
Q 020933 197 PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (319)
Q Consensus 197 ~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 260 (319)
++++||+|++|...+. .+++.+.++|+|||.+++...+ ...+...++.+++
T Consensus 184 ~~~~fD~V~~~~~~~~---------~~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~ 234 (336)
T 2b25_A 184 KSLTFDAVALDMLNPH---------VTLPVFYPHLKHGGVCAVYVVN----ITQVIELLDGIRT 234 (336)
T ss_dssp ----EEEEEECSSSTT---------TTHHHHGGGEEEEEEEEEEESS----HHHHHHHHHHHHH
T ss_pred CCCCeeEEEECCCCHH---------HHHHHHHHhcCCCcEEEEEeCC----HHHHHHHHHHHHh
Confidence 3568999999876543 2689999999999999986533 3445555665554
No 105
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.34 E-value=3.8e-12 Score=109.75 Aligned_cols=100 Identities=17% Similarity=0.156 Sum_probs=80.5
Q ss_pred CceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEE
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~ 206 (319)
+.+|||||||+|.++..+++.. .+|+++|+++.+++.+++.+ ++++++++|+.++.. ++++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~~--~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG--HQIEGLEPATRLVELARQTH---------PSVTFHHGTITDLSD--SPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT--CCEEEECCCHHHHHHHHHHC---------TTSEEECCCGGGGGG--SCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhC---------CCCeEEeCccccccc--CCCCeEEEEe
Confidence 6799999999999999999873 48999999999999999874 368999999887532 3689999998
Q ss_pred cCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 207 D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
...-...+.. ....+++.+.++|+|||.+++..
T Consensus 109 ~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 109 WYSLIHMGPG--ELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp ESSSTTCCTT--THHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhHhcCCHH--HHHHHHHHHHHHcCCCcEEEEEE
Confidence 5433222111 24679999999999999999875
No 106
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.34 E-value=7.2e-12 Score=111.73 Aligned_cols=129 Identities=15% Similarity=0.098 Sum_probs=95.8
Q ss_pred cCCCCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCC
Q 020933 122 CSIPNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEG 199 (319)
Q Consensus 122 ~~~~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~ 199 (319)
+...++.+|||||||+|.++..+++. .+..+|++||+++.+++.+++.... .+++..+.+|........ ..+
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~------~~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD------RRNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT------CTTEEEEESCTTCGGGGTTTCC
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh------hcCeeEEEEeccCccccccccc
Confidence 33456789999999999999999986 5668999999999999999988754 368999999987643221 257
Q ss_pred CccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC--c---ccChHHHHHHHHHHHhh-c
Q 020933 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES--I---WLHMHIIEDIVANCRQI-F 262 (319)
Q Consensus 200 ~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~--~---~~~~~~~~~~~~~l~~~-F 262 (319)
.+|+|++|...+.. ...+++.+++.|||||.+++.... . ......+++..+.+++. |
T Consensus 147 ~vDvVf~d~~~~~~------~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF 209 (233)
T 4df3_A 147 GVDGLYADVAQPEQ------AAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGL 209 (233)
T ss_dssp CEEEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTC
T ss_pred eEEEEEEeccCChh------HHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCC
Confidence 89999998765532 356899999999999998875311 0 11223456666666653 6
No 107
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.34 E-value=1.2e-11 Score=107.55 Aligned_cols=100 Identities=20% Similarity=0.277 Sum_probs=79.6
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh--CCCCCccE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA--VPEGTYDA 203 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~--~~~~~fDv 203 (319)
.+.+|||||||+|.++..+++.. .+|+++|+++.+++.+++. .+++++.+|..+.... ...++||+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----------~~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRG--IEAVGVDGDRTLVDAARAA----------GAGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHT----------CSSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHCC--CEEEEEcCCHHHHHHHHHh----------cccccchhhHHhhcccccccCCCccE
Confidence 56899999999999999999883 5899999999999999986 2567888998876322 12456999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
|++...-. .. ....+++.++++|||||++++...
T Consensus 120 v~~~~~l~-~~----~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 120 ICANFALL-HQ----DIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEESCCC-SS----CCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEECchhh-hh----hHHHHHHHHHHHhCCCeEEEEEec
Confidence 99864433 11 135799999999999999998764
No 108
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.34 E-value=4.3e-12 Score=121.11 Aligned_cols=124 Identities=14% Similarity=0.156 Sum_probs=94.4
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC--CCCCccE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~--~~~~fDv 203 (319)
.+.+|||+|||+|.++..+++. ..+|++||+++.+++.|++++..+ ++ .+++++.+|+.+++... .+++||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n--~~--~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLN--GL--GNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHT--TC--TTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc--CC--CCceEEECCHHHHHHHHHhcCCCeeE
Confidence 5679999999999999999987 478999999999999999998765 22 34999999999987542 1468999
Q ss_pred EEEcCCCCCCCccc-----cchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHH
Q 020933 204 VIVDSSDPIGPAQE-----LFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIV 255 (319)
Q Consensus 204 Ii~D~~~~~~~~~~-----l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~ 255 (319)
|++|++........ -...++++.+.++|+|||++++.+++.....+.+...+
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i 339 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMV 339 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHH
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHH
Confidence 99987642211111 11246889999999999999998776655554444443
No 109
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.34 E-value=2.8e-12 Score=114.46 Aligned_cols=106 Identities=18% Similarity=0.233 Sum_probs=82.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|.++..+++.. ..+|+++|+++.+++.+++++... ++ .++++++++|+.+.. . +++||+|
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~--~~-~~~v~~~~~d~~~~~--~-~~~fD~V 107 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEEL--GV-SERVHFIHNDAAGYV--A-NEKCDVA 107 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEESCCTTCC--C-SSCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhc--CC-CcceEEEECChHhCC--c-CCCCCEE
Confidence 456799999999999999999875 358999999999999999987654 22 248999999987753 2 5789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++.......+ ....+++.++++|||||.+++..
T Consensus 108 ~~~~~~~~~~----~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 108 ACVGATWIAG----GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEESCGGGTS----SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred EECCChHhcC----CHHHHHHHHHHHcCCCeEEEEec
Confidence 9733221111 13578999999999999998854
No 110
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.33 E-value=4.4e-12 Score=110.02 Aligned_cols=103 Identities=22% Similarity=0.273 Sum_probs=81.4
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+.+.+|||||||+|.++..+++.. .+|+++|+++.+++.+++. ..++++++.+|+.++ .++++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~~d~~~~---~~~~~~D~v 111 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLA--DRVTALDGSAEMIAEAGRH--------GLDNVEFRQQDLFDW---TPDRQWDAV 111 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHGGG--------CCTTEEEEECCTTSC---CCSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHhc--------CCCCeEEEecccccC---CCCCceeEE
Confidence 455799999999999999999883 5899999999999999982 225899999998876 236899999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++...-...+.. ....+++.+.++|+|||.+++...
T Consensus 112 ~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 112 FFAHWLAHVPDD--RFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEechhhcCCHH--HHHHHHHHHHHHcCCCeEEEEEeC
Confidence 985432222211 125789999999999999988753
No 111
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.33 E-value=6.7e-12 Score=114.20 Aligned_cols=105 Identities=13% Similarity=0.115 Sum_probs=81.6
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|..+..+++..+ .+|+++|+++.+++.+++.+... +. .++++++.+|+.++ + ++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~----~-~~fD~v 133 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANS--EN-LRSKRVLLAGWEQF----D-EPVDRI 133 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTC--CC-CSCEEEEESCGGGC----C-CCCSEE
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhc--CC-CCCeEEEECChhhC----C-CCeeEE
Confidence 4567999999999999999985434 48999999999999999987643 22 35899999997653 2 789999
Q ss_pred EEcCCC-CCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSD-PIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~-~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...- +... -....+++.+.++|||||.+++..
T Consensus 134 ~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 134 VSIGAFEHFGH---ERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEESCGGGTCT---TTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeCchhhcCh---HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 974322 2211 114578999999999999999875
No 112
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.33 E-value=6.9e-12 Score=120.18 Aligned_cols=128 Identities=15% Similarity=0.167 Sum_probs=95.6
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC--CCCCccE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~--~~~~fDv 203 (319)
.+++|||+|||+|+++..+++.. ..+|++||+++.+++.|++++..+ ++...+++++.+|+.+++... ..++||+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~n--gl~~~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELN--KLDLSKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHhcCCCCCE
Confidence 56799999999999999999874 568999999999999999998765 321128999999999987532 1468999
Q ss_pred EEEcCCCCCCCccc-----cchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHH
Q 020933 204 VIVDSSDPIGPAQE-----LFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVA 256 (319)
Q Consensus 204 Ii~D~~~~~~~~~~-----l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~ 256 (319)
|++|++........ -...+++..+.+.|+|||++++.+++.....+.+...++
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~ 354 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIA 354 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHH
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHH
Confidence 99997642111111 113578899999999999999987665555444444443
No 113
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.33 E-value=5.9e-12 Score=120.60 Aligned_cols=127 Identities=14% Similarity=0.201 Sum_probs=95.8
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC--CCCCccE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV--PEGTYDA 203 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~--~~~~fDv 203 (319)
.+++|||+|||+|.++..+++. +..+|++||+++.+++.+++++..+ ++. .+++++.+|+.+++... ..++||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n--~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLN--GVE-DRMKFIVGSAFEEMEKLQKKGEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHT--TCG-GGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHc--CCC-ccceEEECCHHHHHHHHHhhCCCCCE
Confidence 5679999999999999999987 4568999999999999999998765 222 28999999999886532 1468999
Q ss_pred EEEcCCCCCCCcccc-----chHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHH
Q 020933 204 VIVDSSDPIGPAQEL-----FEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVA 256 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l-----~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~ 256 (319)
|++|++......... ...++++.+.++|+|||++++.+++.....+.+..++.
T Consensus 293 Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~ 350 (396)
T 2as0_A 293 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMII 350 (396)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHH
Confidence 999876422211111 13468899999999999999887766555554444443
No 114
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.33 E-value=3e-12 Score=114.28 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=82.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++..+..+|+++|+++.+++.+++.. ++++++++|+.++. ++++||+|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~---~~~~fD~v 99 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------PNTNFGKADLATWK---PAQKADLL 99 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS---------TTSEEEECCTTTCC---CSSCEEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC---------CCcEEEECChhhcC---ccCCcCEE
Confidence 4567999999999999999988755678999999999999999872 47899999987754 26789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++...-...+ ....+++.+.++|||||.+++...
T Consensus 100 ~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 100 YANAVFQWVP----DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEESCGGGST----THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEeCchhhCC----CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 9854432221 135789999999999999998763
No 115
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.33 E-value=3.5e-12 Score=116.02 Aligned_cols=117 Identities=20% Similarity=0.277 Sum_probs=90.3
Q ss_pred CCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
.++.+|||+|||+|..+..+++. .+..+|+++|+++.+++.+++++.... ..++++++.+|+.+.+ ++++||+
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---g~~~v~~~~~d~~~~~---~~~~fD~ 182 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFY---DIGNVRTSRSDIADFI---SDQMYDA 182 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTS---CCTTEEEECSCTTTCC---CSCCEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcC---CCCcEEEEECchhccC---cCCCccE
Confidence 45679999999999999999986 556799999999999999999875420 1258999999987743 3578999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHh
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 260 (319)
|++|..++ ..+++.+.++|||||++++...+ ......+.+.+++
T Consensus 183 Vi~~~~~~---------~~~l~~~~~~LkpgG~l~i~~~~----~~~~~~~~~~l~~ 226 (275)
T 1yb2_A 183 VIADIPDP---------WNHVQKIASMMKPGSVATFYLPN----FDQSEKTVLSLSA 226 (275)
T ss_dssp EEECCSCG---------GGSHHHHHHTEEEEEEEEEEESS----HHHHHHHHHHSGG
T ss_pred EEEcCcCH---------HHHHHHHHHHcCCCCEEEEEeCC----HHHHHHHHHHHHH
Confidence 99976542 35799999999999999987643 2234455555544
No 116
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.32 E-value=6.5e-12 Score=111.54 Aligned_cols=106 Identities=18% Similarity=0.211 Sum_probs=83.5
Q ss_pred CCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
...+.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++... ..++++++.+|+.+.. .++++||+
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~--~~~~~fD~ 90 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEK----GVENVRFQQGTAESLP--FPDDSFDI 90 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHH----TCCSEEEEECBTTBCC--SCTTCEEE
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc----CCCCeEEEecccccCC--CCCCcEEE
Confidence 3467899999999999999999875 48999999999999999987654 2247999999987642 23578999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|++.......+ ....+++.++++|||||.+++..
T Consensus 91 v~~~~~l~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 91 ITCRYAAHHFS----DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCchhhcc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 99864322111 13578999999999999998853
No 117
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.32 E-value=5.7e-12 Score=112.52 Aligned_cols=118 Identities=19% Similarity=0.268 Sum_probs=91.4
Q ss_pred CCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+.+|||+|||+|.++..+++. .+..+|+++|+++.+++.+++++.... ..++++++.+|+.+.. .++++||+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~---g~~~v~~~~~d~~~~~--~~~~~~D~ 169 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFW---QVENVRFHLGKLEEAE--LEEAAYDG 169 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC---CCCCEEEEESCGGGCC--CCTTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc---CCCCEEEEECchhhcC--CCCCCcCE
Confidence 45679999999999999999987 556799999999999999999875420 1358999999987751 23578999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHh
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 260 (319)
|++|..++ ..+++.+.++|+|||.+++...+ .....++.+.+++
T Consensus 170 v~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~l~~ 213 (258)
T 2pwy_A 170 VALDLMEP---------WKVLEKAALALKPDRFLVAYLPN----ITQVLELVRAAEA 213 (258)
T ss_dssp EEEESSCG---------GGGHHHHHHHEEEEEEEEEEESC----HHHHHHHHHHHTT
T ss_pred EEECCcCH---------HHHHHHHHHhCCCCCEEEEEeCC----HHHHHHHHHHHHH
Confidence 99976542 25799999999999999986543 2345556666654
No 118
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.32 E-value=4.5e-12 Score=121.09 Aligned_cols=109 Identities=21% Similarity=0.238 Sum_probs=86.9
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
.+.+|||||||+|.++..+++.. .+|++||+|+.+++.+++++... ..+++++.+|+.+... ++++||+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g--~~V~gvDis~~al~~A~~n~~~~-----~~~v~~~~~D~~~~~~--~~~~fD~Ii 303 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLEAN-----ALKAQALHSDVDEALT--EEARFDIIV 303 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTT--CEEEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTTSC--TTCCEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc-----CCCeEEEEcchhhccc--cCCCeEEEE
Confidence 56799999999999999999883 58999999999999999998764 2348999999887753 247899999
Q ss_pred EcCCCCCCCcc-ccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 206 VDSSDPIGPAQ-ELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 206 ~D~~~~~~~~~-~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
++.+...+... .-....+++.+.++|||||++++....
T Consensus 304 ~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 304 TNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp ECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 98765432211 112357899999999999999987644
No 119
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.32 E-value=2.5e-12 Score=113.65 Aligned_cols=106 Identities=13% Similarity=0.135 Sum_probs=82.3
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++.+|||||||+|..+..+++. ..+|+++|+++.+++.+++++.... ...+++++++|+.++. ++++||+|+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~---~~~~v~~~~~d~~~~~---~~~~fD~v~ 137 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSSP---KAEYFSFVKEDVFTWR---PTELFDLIF 137 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTSG---GGGGEEEECCCTTTCC---CSSCEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhccC---CCcceEEEECchhcCC---CCCCeeEEE
Confidence 3469999999999999999874 3689999999999999999876421 1247999999988753 256899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+.......+.. ....+++.+.++|||||.+++..
T Consensus 138 ~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 138 DYVFFCAIEPE--MRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp EESSTTTSCGG--GHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EChhhhcCCHH--HHHHHHHHHHHHCCCCcEEEEEE
Confidence 75433222211 24578999999999999998754
No 120
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.32 E-value=6e-12 Score=129.04 Aligned_cols=114 Identities=12% Similarity=0.206 Sum_probs=90.8
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++++|||+|||+|+++..+++. +..+|++||+|+.+++.+++++..+ ++.+.+++++++|+.+++... .++||+|+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~n--gl~~~~v~~i~~D~~~~l~~~-~~~fD~Ii 614 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLN--GLTGRAHRLIQADCLAWLREA-NEQFDLIF 614 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHT--TCCSTTEEEEESCHHHHHHHC-CCCEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHc--CCCccceEEEecCHHHHHHhc-CCCccEEE
Confidence 5679999999999999999886 3568999999999999999998765 444458999999999998765 67899999
Q ss_pred EcCCCCCCCc--cc-----cchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 206 VDSSDPIGPA--QE-----LFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 206 ~D~~~~~~~~--~~-----l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
+|++...... .. -...++++.+.++|+|||+|++.+++
T Consensus 615 ~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 615 IDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9986421100 00 11346788899999999999987765
No 121
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.31 E-value=1.5e-11 Score=106.74 Aligned_cols=100 Identities=17% Similarity=0.153 Sum_probs=78.4
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+.+.+|||||||+|.++..+++.. .+|+++|+++.+++.+++.+ +++++.+|+.... .+++||+|
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~----------~~~~~~~d~~~~~---~~~~fD~v 106 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAG--FDVDATDGSPELAAEASRRL----------GRPVRTMLFHQLD---AIDAYDAV 106 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH----------TSCCEECCGGGCC---CCSCEEEE
T ss_pred CCCCcEEEECCCCCHHHHHHHHcC--CeEEEECCCHHHHHHHHHhc----------CCceEEeeeccCC---CCCcEEEE
Confidence 356799999999999999999873 58999999999999999875 3567788877653 36899999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+.. ....+++.++++|||||++++..
T Consensus 107 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 107 WAHACLLHVPRD--ELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp EECSCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecCchhhcCHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 975432211111 13578999999999999999874
No 122
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.31 E-value=6.1e-12 Score=112.40 Aligned_cols=103 Identities=19% Similarity=0.247 Sum_probs=82.2
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++.. ..++++++++|+.+.. .++++||+|
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~~d~~~~~--~~~~~fD~v 108 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARG--YRYIALDADAAMLEVFRQKIAG-----VDRKVQVVQADARAIP--LPDESVHGV 108 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTT--CEEEEEESCHHHHHHHHHHTTT-----SCTTEEEEESCTTSCC--SCTTCEEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCC--CEEEEEECCHHHHHHHHHHhhc-----cCCceEEEEcccccCC--CCCCCeeEE
Confidence 456799999999999999999873 6899999999999999998722 2468999999986642 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++...-...+ ....+++.+.++|||||.+++.
T Consensus 109 ~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 109 IVVHLWHLVP----DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEESCGGGCT----THHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCchhhcC----CHHHHHHHHHHHCCCCcEEEEE
Confidence 9754332221 1357899999999999999876
No 123
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.31 E-value=1.8e-11 Score=105.83 Aligned_cols=131 Identities=19% Similarity=0.235 Sum_probs=88.6
Q ss_pred HHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH
Q 020933 113 QEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF 192 (319)
Q Consensus 113 ~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~ 192 (319)
.+++....+ ..++.+|||||||+|+.+..+++. ..+|++||+++.. ..++++++++|+.+.
T Consensus 14 ~ei~~~~~~--~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~---------------~~~~v~~~~~D~~~~ 74 (191)
T 3dou_A 14 EFLLDRYRV--VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME---------------EIAGVRFIRCDIFKE 74 (191)
T ss_dssp HHHHHHHCC--SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC---------------CCTTCEEEECCTTSS
T ss_pred HHHHHHcCC--CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc---------------cCCCeEEEEccccCH
Confidence 455544332 245689999999999999999988 4789999999751 125799999997652
Q ss_pred H-----Hh-CC---CCCccEEEEcCCCCCCCcc---c----cchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHH
Q 020933 193 L-----KA-VP---EGTYDAVIVDSSDPIGPAQ---E----LFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVA 256 (319)
Q Consensus 193 l-----~~-~~---~~~fDvIi~D~~~~~~~~~---~----l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~ 256 (319)
. .. .. .++||+|++|......... . -.....++.+.++|||||.|++.. ........+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~----~~~~~~~~~~~ 150 (191)
T 3dou_A 75 TIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ----FQGDMTNDFIA 150 (191)
T ss_dssp SHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE----ECSTHHHHHHH
T ss_pred HHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE----cCCCCHHHHHH
Confidence 1 11 10 1489999998754322110 0 011356888899999999999853 22334567788
Q ss_pred HHHhhcCCcee
Q 020933 257 NCRQIFKGSVN 267 (319)
Q Consensus 257 ~l~~~F~~~v~ 267 (319)
.++..|. .+.
T Consensus 151 ~l~~~F~-~v~ 160 (191)
T 3dou_A 151 IWRKNFS-SYK 160 (191)
T ss_dssp HHGGGEE-EEE
T ss_pred HHHHhcC-EEE
Confidence 8888893 443
No 124
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.31 E-value=5.9e-12 Score=114.47 Aligned_cols=117 Identities=20% Similarity=0.312 Sum_probs=91.0
Q ss_pred CCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+.+|||+|||+|.++..+++. .+..+|+++|+++.+++.+++++... ++ .++++++.+|+.+.+ ++++||+
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~---~~~~~D~ 184 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW--GL-IERVTIKVRDISEGF---DEKDVDA 184 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT--TC-GGGEEEECCCGGGCC---SCCSEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc--CC-CCCEEEEECCHHHcc---cCCccCE
Confidence 35679999999999999999987 55679999999999999999987654 22 247999999988763 3568999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHh
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 260 (319)
|++|..++ .++++.+.++|+|||.+++...+ ......+.+.+++
T Consensus 185 V~~~~~~~---------~~~l~~~~~~L~pgG~l~~~~~~----~~~~~~~~~~l~~ 228 (277)
T 1o54_A 185 LFLDVPDP---------WNYIDKCWEALKGGGRFATVCPT----TNQVQETLKKLQE 228 (277)
T ss_dssp EEECCSCG---------GGTHHHHHHHEEEEEEEEEEESS----HHHHHHHHHHHHH
T ss_pred EEECCcCH---------HHHHHHHHHHcCCCCEEEEEeCC----HHHHHHHHHHHHH
Confidence 99976542 35799999999999999987543 2334455555554
No 125
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.31 E-value=9.1e-12 Score=112.25 Aligned_cols=107 Identities=22% Similarity=0.299 Sum_probs=83.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++++... ++ ..+++++.+|+.+.. .++++||+|
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~--~~~~~fD~v 133 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAA--GL-ANRVTFSYADAMDLP--FEDASFDAV 133 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTSCC--SCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhc--CC-CcceEEEECccccCC--CCCCCccEE
Confidence 456799999999999999998864 368999999999999999987653 22 248999999987642 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+. ...+++.++++|||||.+++..
T Consensus 134 ~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 134 WALESLHHMPD----RGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEESCTTTSSC----HHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEechhhhCCC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 97433222211 3579999999999999998865
No 126
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.31 E-value=1.3e-11 Score=112.83 Aligned_cols=101 Identities=14% Similarity=0.093 Sum_probs=84.6
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||+|||+|.++..++++. ..+|+++|+||..++.++++...+ +.. .+++++++|++++.. .+.||.|
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N--~v~-~~v~~~~~D~~~~~~---~~~~D~V 196 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLN--KVE-DRMSAYNMDNRDFPG---ENIADRI 196 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHT--TCT-TTEEEECSCTTTCCC---CSCEEEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHc--CCC-CcEEEEeCcHHHhcc---ccCCCEE
Confidence 467899999999999999999884 468999999999999999998766 343 489999999998853 5789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+++.+.. ..+|+..+.++||+||++.+.
T Consensus 197 i~~~p~~--------~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 197 LMGYVVR--------THEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp EECCCSS--------GGGGHHHHHHHEEEEEEEEEE
T ss_pred EECCCCc--------HHHHHHHHHHHcCCCCEEEEE
Confidence 9886531 346888999999999998654
No 127
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.31 E-value=3e-12 Score=115.06 Aligned_cols=101 Identities=23% Similarity=0.253 Sum_probs=79.6
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+.+.+|||||||+|.++..+++.. .+|+++|+++.+++.+++.++ +++++++|+.++.. +++||+|
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~---------~~~~~~~d~~~~~~---~~~fD~v 114 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP---------DAVLHHGDMRDFSL---GRRFSAV 114 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTCCC---SCCEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC---------CCEEEECChHHCCc---cCCcCEE
Confidence 456899999999999999999874 589999999999999998753 68999999877532 5789999
Q ss_pred EEcC-CCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDS-SDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~-~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++.. .-...+.. -....+++.+.++|||||++++.
T Consensus 115 ~~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 115 TCMFSSIGHLAGQ-AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp EECTTGGGGSCHH-HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EEcCchhhhcCCH-HHHHHHHHHHHHhcCCCcEEEEE
Confidence 9754 21111100 01346899999999999999985
No 128
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.30 E-value=6.3e-12 Score=113.28 Aligned_cols=117 Identities=20% Similarity=0.166 Sum_probs=88.3
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||+|||+|.++..+++... +|+++|+|+.+++.+++++... + .. ++++.+|+.+.+. +++||+|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~--~--~~-v~~~~~d~~~~~~---~~~fD~V 188 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRN--G--VR-PRFLEGSLEAALP---FGPFDLL 188 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHT--T--CC-CEEEESCHHHHGG---GCCEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHc--C--Cc-EEEEECChhhcCc---CCCCCEE
Confidence 4568999999999999999988753 8999999999999999987654 1 12 8999999887642 4689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhh-c
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI-F 262 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F 262 (319)
+++.... ....+++.+.++|+|||.+++.... ......+.+.+++. |
T Consensus 189 v~n~~~~-------~~~~~l~~~~~~LkpgG~lils~~~----~~~~~~v~~~l~~~Gf 236 (254)
T 2nxc_A 189 VANLYAE-------LHAALAPRYREALVPGGRALLTGIL----KDRAPLVREAMAGAGF 236 (254)
T ss_dssp EEECCHH-------HHHHHHHHHHHHEEEEEEEEEEEEE----GGGHHHHHHHHHHTTC
T ss_pred EECCcHH-------HHHHHHHHHHHHcCCCCEEEEEeec----cCCHHHHHHHHHHCCC
Confidence 9864321 1357899999999999999985321 12234455555544 6
No 129
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.30 E-value=2.2e-12 Score=111.60 Aligned_cols=109 Identities=17% Similarity=0.288 Sum_probs=83.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++... .+|+++|+++.+++.+++++.. .++++++.+|+.+. ..++++||+|
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~------~~~i~~~~~d~~~~--~~~~~~fD~v 111 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAH------VPQLRWETMDVRKL--DFPSASFDVV 111 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTT------CTTCEEEECCTTSC--CSCSSCEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhccc------CCCcEEEEcchhcC--CCCCCcccEE
Confidence 4567999999999999999998753 3899999999999999998753 35899999998765 2235789999
Q ss_pred EEcCCC---------CCCCcc--ccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDSSD---------PIGPAQ--ELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~~---------~~~~~~--~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++...- ++.... .-....+++.+.++|||||.+++...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 112 LEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp EEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 974321 111100 01135789999999999999998753
No 130
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.30 E-value=3.7e-12 Score=112.50 Aligned_cols=104 Identities=16% Similarity=0.238 Sum_probs=81.2
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
...+|||||||+|.++..+++. .+|+++|+++.+++.+++++... ..+++++.+|+.++. . .++||+|+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~-~~~fD~v~ 101 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMET-----NRHVDFWVQDMRELE--L-PEPVDAIT 101 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEECCGGGCC--C-SSCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhc-----CCceEEEEcChhhcC--C-CCCcCEEE
Confidence 4579999999999999999877 58999999999999999987643 257999999987652 2 47899999
Q ss_pred EcC--CCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 206 VDS--SDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 206 ~D~--~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+.. ........ ....+++.+.++|+|||++++...
T Consensus 102 ~~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 102 ILCDSLNYLQTEA--DVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp ECTTGGGGCCSHH--HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EeCCchhhcCCHH--HHHHHHHHHHHhcCCCeEEEEEcC
Confidence 753 11111111 134689999999999999998653
No 131
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.30 E-value=7.9e-12 Score=110.38 Aligned_cols=102 Identities=18% Similarity=0.216 Sum_probs=81.7
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
.+.+|||||||+|..+..+++.. ..+|+++|+++.+++.+++.+.. .+++++.+|+.+.. .++++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-------~~~~~~~~d~~~~~--~~~~~fD~v~ 112 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGPD-------TGITYERADLDKLH--LPQDSFDLAY 112 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSCS-------SSEEEEECCGGGCC--CCTTCEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhccc-------CCceEEEcChhhcc--CCCCCceEEE
Confidence 56799999999999999999874 34899999999999999998652 37999999987743 2357899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+...-...+ ....+++.++++|+|||.+++..
T Consensus 113 ~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 113 SSLALHYVE----DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eeccccccc----hHHHHHHHHHHhcCcCcEEEEEe
Confidence 754321111 14578999999999999999865
No 132
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.30 E-value=5.5e-12 Score=114.84 Aligned_cols=104 Identities=14% Similarity=0.077 Sum_probs=82.6
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
.+.+|||||||+|.++..+++.. .+|++||+++.+++.+++++... . .+++++.+|+.+... +++||+|+
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g--~~v~~vD~s~~~~~~a~~~~~~~----~-~~~~~~~~d~~~~~~---~~~fD~i~ 189 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG--YDVTSWDHNENSIAFLNETKEKE----N-LNISTALYDINAANI---QENYDFIV 189 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT----T-CCEEEEECCGGGCCC---CSCEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHc----C-CceEEEEeccccccc---cCCccEEE
Confidence 56799999999999999999883 58999999999999999988754 2 289999999877532 57899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+...-...... ....+++.+.++|+|||++++..
T Consensus 190 ~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 190 STVVFMFLNRE--RVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp ECSSGGGSCGG--GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EccchhhCCHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 86543222111 13579999999999999977643
No 133
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.30 E-value=1.2e-11 Score=109.88 Aligned_cols=118 Identities=21% Similarity=0.292 Sum_probs=90.3
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||+|||+|.++..+++. ..+|+++|+++.+++.+++++... ++ +++++++.+|..+... +++.||+|
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~--~~~~~D~v 162 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKF--NL-GKNVKFFNVDFKDAEV--PEGIFHAA 162 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHT--TC-CTTEEEECSCTTTSCC--CTTCBSEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc--CC-CCcEEEEEcChhhccc--CCCcccEE
Confidence 35679999999999999999988 478999999999999999987654 22 2589999999877531 24689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhc
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIF 262 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F 262 (319)
+++..++ ..+++.+.++|+|||.+++...+ ......+.+.+++.|
T Consensus 163 ~~~~~~~---------~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~l~~~f 207 (248)
T 2yvl_A 163 FVDVREP---------WHYLEKVHKSLMEGAPVGFLLPT----ANQVIKLLESIENYF 207 (248)
T ss_dssp EECSSCG---------GGGHHHHHHHBCTTCEEEEEESS----HHHHHHHHHHSTTTE
T ss_pred EECCcCH---------HHHHHHHHHHcCCCCEEEEEeCC----HHHHHHHHHHHHhhC
Confidence 9875532 35789999999999999987543 234445555554435
No 134
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.30 E-value=6.1e-12 Score=111.97 Aligned_cols=106 Identities=18% Similarity=0.257 Sum_probs=82.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++.. ..+|+++|+++.+++.+++++... ++++++++|+.+.. .++++||+|
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~------~~~~~~~~d~~~~~--~~~~~fD~v 162 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM------PVGKFILASMETAT--LPPNTYDLI 162 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS------SEEEEEESCGGGCC--CCSSCEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC------CceEEEEccHHHCC--CCCCCeEEE
Confidence 356899999999999999998764 468999999999999999987542 58999999987642 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+.. ....+++.+.++|||||++++..
T Consensus 163 ~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 163 VIQWTAIYLTDA--DFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhhhCCHH--HHHHHHHHHHHhcCCCeEEEEEe
Confidence 975432211111 13578999999999999998865
No 135
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.30 E-value=7.2e-12 Score=111.28 Aligned_cols=106 Identities=11% Similarity=0.104 Sum_probs=81.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC---CCCCc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV---PEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~---~~~~f 201 (319)
....+|||||||+|..+..+++..+ +|++||+|+.+++.+++++. ..+++++++|+.+..... ....|
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT-------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------ccCceEEECcccccccccccccccCc
Confidence 4567999999999999999998854 89999999999999999873 248999999987753211 01359
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+|++.......+... ...+++.++++|||||++++..
T Consensus 126 d~v~~~~~~~~~~~~~--~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEK--RELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp CEEEEESSSTTSCGGG--HHHHHHHHHHHHTTTCEEEEEE
T ss_pred cEEEEcchhhcCCHHH--HHHHHHHHHHHcCCCCEEEEEe
Confidence 9999875544333211 3579999999999999877653
No 136
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.30 E-value=4.4e-12 Score=120.97 Aligned_cols=113 Identities=19% Similarity=0.245 Sum_probs=86.2
Q ss_pred CCCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccC---C-CCCCCeEEEEcChHHHHH----h
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAV---G-FEDPRVTLHIGDGVAFLK----A 195 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~---~-~~~~~v~v~~~D~~~~l~----~ 195 (319)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.+++++..... + +..++++++++|+.+... .
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 356799999999999999998863 457999999999999999998643210 1 234689999999887521 1
Q ss_pred CCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 196 VPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 196 ~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.++++||+|+++..-...+. ...+++.++++|||||+|++..
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTN----KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCC----HHHHHHHHHHHcCCCCEEEEEE
Confidence 23679999998654322221 3579999999999999999863
No 137
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.30 E-value=6.5e-12 Score=111.15 Aligned_cols=106 Identities=18% Similarity=0.120 Sum_probs=80.1
Q ss_pred CCCCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHH-hCCCCCc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLK-AVPEGTY 201 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~-~~~~~~f 201 (319)
.....+|||||||+|.++..+++.. +..+|++||+++.+++.+.+..... ++++++.+|+.+... ....++|
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~------~~v~~~~~d~~~~~~~~~~~~~~ 148 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR------TNIIPVIEDARHPHKYRMLIAMV 148 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC------TTEEEECSCTTCGGGGGGGCCCE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc------CCeEEEEcccCChhhhcccCCcE
Confidence 3456799999999999999999873 4578999999988777666554431 589999999877421 1125789
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+|++|...+. ....+++.+.++|||||++++..
T Consensus 149 D~V~~~~~~~~------~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 149 DVIFADVAQPD------QTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp EEEEECCCCTT------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEcCCCcc------HHHHHHHHHHHHcCCCeEEEEEE
Confidence 99999866221 12456888999999999999854
No 138
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.30 E-value=9.5e-12 Score=103.60 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=84.1
Q ss_pred CCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHH-----Hh-CC
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL-----KA-VP 197 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l-----~~-~~ 197 (319)
..+.+|||+|||+|.++..+++. .+..+++++|+++ +++. ++++++.+|+.+.. .. .+
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------VGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC--------------TTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc--------------CcEEEEEcccccchhhhhhhccCC
Confidence 35679999999999999999887 4457999999999 5321 47899999987652 10 23
Q ss_pred CCCccEEEEcCCCCCCCccccc-------hHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcC
Q 020933 198 EGTYDAVIVDSSDPIGPAQELF-------EKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFK 263 (319)
Q Consensus 198 ~~~fDvIi~D~~~~~~~~~~l~-------~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 263 (319)
+++||+|+++............ ...+++.+.++|+|||.+++.... ......+.+.+++.|.
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~----~~~~~~~~~~~~~~~~ 154 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ----GEGFDEYLREIRSLFT 154 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES----STTHHHHHHHHHHHEE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec----CCcHHHHHHHHHHhhh
Confidence 5789999987654332211000 157899999999999999986422 1223455566666673
No 139
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.30 E-value=1.3e-11 Score=114.04 Aligned_cols=106 Identities=13% Similarity=0.090 Sum_probs=82.4
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|.++..+++..+ .+|+++|+++.+++.+++.+... +. .++++++.+|+.++ +++||+|
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~-----~~~fD~v 159 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLASI--DT-NRSRQVLLQGWEDF-----AEPVDRI 159 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTS--CC-SSCEEEEESCGGGC-----CCCCSEE
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhc--CC-CCceEEEECChHHC-----CCCcCEE
Confidence 4567999999999999999988643 58999999999999999987654 22 24799999997654 3789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+. -....+++.+.++|||||.+++..
T Consensus 160 ~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 160 VSIEAFEHFGH--ENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EEESCGGGTCG--GGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeChHHhcCH--HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 97533211111 124679999999999999999875
No 140
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.30 E-value=1e-11 Score=117.15 Aligned_cols=112 Identities=13% Similarity=0.160 Sum_probs=87.6
Q ss_pred CCCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+.+|||+|||+|.++.+++... +..+|+++|+|+.+++.|++++... +. .+++++++|+.++... .+.||+
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~--g~--~~i~~~~~D~~~~~~~--~~~~D~ 275 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS--GL--SWIRFLRADARHLPRF--FPEVDR 275 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT--TC--TTCEEEECCGGGGGGT--CCCCSE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc--CC--CceEEEeCChhhCccc--cCCCCE
Confidence 356799999999999999999864 5678999999999999999998765 32 2899999999887542 466999
Q ss_pred EEEcCCCCCCCc--cc--cchHHHHHHHHHhcCCCcEEEEecC
Q 020933 204 VIVDSSDPIGPA--QE--LFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 204 Ii~D~~~~~~~~--~~--l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
|++|++...... .. .....+++.++++|+|||.+++.+.
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999987543221 11 1125789999999999999998654
No 141
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.29 E-value=4.3e-12 Score=113.08 Aligned_cols=106 Identities=21% Similarity=0.276 Sum_probs=82.2
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++... ..+++++++|+.+.. . .++||+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~--~-~~~fD~v 109 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG--YEVVGLDLHEEMLRVARRKAKER-----NLKIEFLQGDVLEIA--F-KNEFDAV 109 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT-----TCCCEEEESCGGGCC--C-CSCEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhc-----CCceEEEECChhhcc--c-CCCccEE
Confidence 356799999999999999999873 58999999999999999987653 237999999987752 2 4689999
Q ss_pred EEcCCC-CCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDSSD-PIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~~-~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++.... ...... ....+++.+.++|+|||++++...
T Consensus 110 ~~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 110 TMFFSTIMYFDEE--DLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EECSSGGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcCCchhcCCHH--HHHHHHHHHHHHcCCCeEEEEecc
Confidence 974322 111111 135789999999999999998653
No 142
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.29 E-value=1.1e-11 Score=110.02 Aligned_cols=107 Identities=10% Similarity=0.128 Sum_probs=85.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|.++..+++..+..+|+++|+|+..++.|++++..+ ++. .+++++.+|+.+.+.. .++||+|
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl~-~~i~~~~~d~l~~l~~--~~~~D~I 88 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH--GLK-EKIQVRLANGLAAFEE--TDQVSVI 88 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TCT-TTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCC-ceEEEEECchhhhccc--CcCCCEE
Confidence 4567999999999999999999877789999999999999999998765 333 3899999998776531 2369998
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++... + . ....++++.+.+.|+++|.|+++..
T Consensus 89 viaG~---G--g-~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 89 TIAGM---G--G-RLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp EEEEE---C--H-HHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred EEcCC---C--h-HHHHHHHHHHHHHhCCCCEEEEECC
Confidence 85311 1 1 1135789999999999999999853
No 143
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.29 E-value=5.5e-12 Score=116.65 Aligned_cols=106 Identities=15% Similarity=0.174 Sum_probs=84.2
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++.. ..+|+++|+++.+++.+++++... ++ ..+++++.+|+.+.. .++++||+|
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~--~~~~~fD~V 189 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRAREL--RI-DDHVRSRVCNMLDTP--FDKGAVTAS 189 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHT--TC-TTTEEEEECCTTSCC--CCTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHc--CC-CCceEEEECChhcCC--CCCCCEeEE
Confidence 456799999999999999998874 368999999999999999987654 22 248999999987642 235799999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-.... ...+++.+.++|||||.+++..
T Consensus 190 ~~~~~l~~~~-----~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 190 WNNESTMYVD-----LHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EEESCGGGSC-----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhCC-----HHHHHHHHHHHcCCCcEEEEEE
Confidence 9743321111 5689999999999999998765
No 144
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.29 E-value=8.9e-12 Score=110.07 Aligned_cols=102 Identities=18% Similarity=0.215 Sum_probs=82.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|.++..+++.. .+|+++|+++.+++.+++... .++++++.+|+.+.. .++++||+|
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~~d~~~~~--~~~~~fD~v 120 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTG--YKAVGVDISEVMIQKGKERGE-------GPDLSFIKGDLSSLP--FENEQFEAI 120 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHTTTC-------BTTEEEEECBTTBCS--SCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhcc-------cCCceEEEcchhcCC--CCCCCccEE
Confidence 456799999999999999999883 589999999999999998752 358999999987652 236899999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+ ....+++.+.++|+|||++++..
T Consensus 121 ~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 121 MAINSLEWTE----EPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp EEESCTTSSS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcChHhhcc----CHHHHHHHHHHHhCCCeEEEEEE
Confidence 9754332221 13478999999999999999875
No 145
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.29 E-value=3.4e-12 Score=120.03 Aligned_cols=108 Identities=19% Similarity=0.298 Sum_probs=85.0
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
.+.+|||||||+|.++..+++..+..+|+++|+|+.+++.+++++... ...++++.+|+.++. +++||+|+
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~-----~~~~~~~~~d~~~~~----~~~fD~Iv 266 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN-----GVEGEVFASNVFSEV----KGRFDMII 266 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT-----TCCCEEEECSTTTTC----CSCEEEEE
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh-----CCCCEEEEccccccc----cCCeeEEE
Confidence 356999999999999999998866668999999999999999988654 234678999987653 57899999
Q ss_pred EcCCCCCCCc-cccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 206 VDSSDPIGPA-QELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 206 ~D~~~~~~~~-~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++.+.+.+.. ..-....+++.+.++|||||.+++...
T Consensus 267 ~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 267 SNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp ECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 8765543221 111135789999999999999988654
No 146
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.29 E-value=1.6e-11 Score=114.17 Aligned_cols=114 Identities=16% Similarity=0.236 Sum_probs=87.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++... + -++++++++|+.++.. . .++||+
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~--g--~~~v~~~~~D~~~~~~-~-~~~fD~ 190 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL--G--VLNVILFHSSSLHIGE-L-NVEFDK 190 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH--T--CCSEEEESSCGGGGGG-G-CCCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh--C--CCeEEEEECChhhccc-c-cccCCE
Confidence 456799999999999999999863 3478999999999999999998765 2 2479999999988754 2 568999
Q ss_pred EEEcCCCC-CCC---ccc--------------cchHHHHHHHHHhcCCCcEEEEecCCc
Q 020933 204 VIVDSSDP-IGP---AQE--------------LFEKPFFESVAKALRPGGVVSTQAESI 244 (319)
Q Consensus 204 Ii~D~~~~-~~~---~~~--------------l~~~~f~~~~~~~LkpgG~lv~~~~~~ 244 (319)
|++|++.. .+. ... ....++++.+.++|||||++++.+++.
T Consensus 191 Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 191 ILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 99987631 110 000 012578999999999999999977654
No 147
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.29 E-value=7.8e-12 Score=118.95 Aligned_cols=105 Identities=14% Similarity=0.176 Sum_probs=82.5
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
.+++||||| |+|.++..+++..+..+|++||+|+.+++.|++++... ++ .+++++.+|+.+.+....+++||+|+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~--g~--~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI--GY--EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH--TC--CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CC--CCEEEEEChhhhhchhhccCCccEEE
Confidence 467999999 99999999988765579999999999999999998765 33 27999999998744321146899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCc-EEEEe
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGG-VVSTQ 240 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG-~lv~~ 240 (319)
+|++. ... . ...+++.+.++|+||| ++++.
T Consensus 247 ~~~p~--~~~-~--~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 247 TDPPE--TLE-A--IRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp ECCCS--SHH-H--HHHHHHHHHHTBCSTTCEEEEE
T ss_pred ECCCC--chH-H--HHHHHHHHHHHcccCCeEEEEE
Confidence 98743 211 2 3689999999999999 43444
No 148
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.29 E-value=1.7e-11 Score=107.45 Aligned_cols=112 Identities=12% Similarity=0.221 Sum_probs=83.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccC-CCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~-~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
+++.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++..... .....+++++.+|+.... .++++||+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~D~ 104 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKG--YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--FHDSSFDF 104 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--SCTTCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--CCCCceeE
Confidence 456799999999999999999883 5899999999999999998765411 011237899999987642 23678999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|++...-...+.. .....+++.+.++|+|||.+++..
T Consensus 105 v~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 105 AVMQAFLTSVPDP-KERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEEESCGGGCCCH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcchhhcCCCH-HHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9975432211110 012268999999999999998864
No 149
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.28 E-value=3.9e-12 Score=117.24 Aligned_cols=111 Identities=16% Similarity=0.169 Sum_probs=84.0
Q ss_pred CCCCceeeEeeccccHHHHHHH-hcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVS-RHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~-~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
.+.+.+|||||||+|..+..++ +..+..+|+++|+++.+++.+++++... +. ..+++++++|+.+.. . +++||
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~--~-~~~fD 189 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH--AL-AGQITLHRQDAWKLD--T-REGYD 189 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS--TT-GGGEEEEECCGGGCC--C-CSCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc--CC-CCceEEEECchhcCC--c-cCCeE
Confidence 3467899999999999999985 4445679999999999999999988654 22 246999999988753 2 38899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|++.......+.. .....+++.+.++|||||++++..
T Consensus 190 ~v~~~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 190 LLTSNGLNIYEPDD-ARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp EEECCSSGGGCCCH-HHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECChhhhcCCH-HHHHHHHHHHHHhcCCCeEEEEEe
Confidence 99964422211111 112348999999999999999875
No 150
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.28 E-value=2.2e-12 Score=114.39 Aligned_cols=109 Identities=10% Similarity=-0.024 Sum_probs=78.7
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECC-hHHHHHH---HhccccccCCCCCCCeEEEEcChHHHHHhCCCCCc
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEID-KMVVDVS---KQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid-~~vi~~a---k~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
.+.+|||||||+|..+..+++..+..+|++||++ +.+++.| +++.... .-++++++.+|+..+.... .+.+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~----~~~~v~~~~~d~~~l~~~~-~d~v 98 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG----GLSNVVFVIAAAESLPFEL-KNIA 98 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT----CCSSEEEECCBTTBCCGGG-TTCE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc----CCCCeEEEEcCHHHhhhhc-cCeE
Confidence 5679999999999999999876567899999999 7777776 7665443 2357999999988763222 2567
Q ss_pred cEEEEcCCCCCCC-ccccchHHHHHHHHHhcCCCcEEEE
Q 020933 202 DAVIVDSSDPIGP-AQELFEKPFFESVAKALRPGGVVST 239 (319)
Q Consensus 202 DvIi~D~~~~~~~-~~~l~~~~f~~~~~~~LkpgG~lv~ 239 (319)
|.|.+..+.+... .......++++.++++|||||.+++
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 7777654322100 0001134689999999999999988
No 151
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.28 E-value=1.1e-11 Score=112.44 Aligned_cols=100 Identities=17% Similarity=0.276 Sum_probs=79.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|..+..+++. ..+|+++|+++.+++.+++.+ ++++++++|+.++. . +++||+|
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~-~~~fD~v 121 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQS--GAEVLGTDNAATMIEKARQNY---------PHLHFDVADARNFR--V-DKPLDAV 121 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC---------TTSCEEECCTTTCC--C-SSCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHhhC---------CCCEEEECChhhCC--c-CCCcCEE
Confidence 35679999999999999999983 468999999999999999875 36789999987642 2 5789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++...-...+ ....+++.++++|||||.+++...
T Consensus 122 ~~~~~l~~~~----d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 122 FSNAMLHWVK----EPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EEESCGGGCS----CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhhCc----CHHHHHHHHHHhcCCCcEEEEEec
Confidence 9754332211 135789999999999999998753
No 152
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.28 E-value=4.4e-12 Score=109.56 Aligned_cols=119 Identities=14% Similarity=0.096 Sum_probs=84.1
Q ss_pred HHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChH
Q 020933 111 AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV 190 (319)
Q Consensus 111 ~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~ 190 (319)
.|.+++..+. ..+.+.+|||||||+|..+..++... ..+|+++|+++.+++.+++++... ..+++++++|+.
T Consensus 10 ~~~~~~~~~~--~~~~~~~vLDiGcG~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~ 81 (209)
T 2p8j_A 10 QLYRFLKYCN--ESNLDKTVLDCGAGGDLPPLSIFVED-GYKTYGIEISDLQLKKAENFSREN-----NFKLNISKGDIR 81 (209)
T ss_dssp HHHHHHHHHH--HSSSCSEEEEESCCSSSCTHHHHHHT-TCEEEEEECCHHHHHHHHHHHHHH-----TCCCCEEECCTT
T ss_pred hHHHHHHHHh--ccCCCCEEEEECCCCCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEECchh
Confidence 4555554432 12456799999999999855444433 358999999999999999987653 247899999987
Q ss_pred HHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 191 AFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 191 ~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+.. .++++||+|++...-...+.. ....+++.+.++|||||++++..
T Consensus 82 ~~~--~~~~~fD~v~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 82 KLP--FKDESMSFVYSYGTIFHMRKN--DVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp SCC--SCTTCEEEEEECSCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hCC--CCCCceeEEEEcChHHhCCHH--HHHHHHHHHHHHcCCCcEEEEEE
Confidence 642 235789999975322111111 14578999999999999998865
No 153
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.28 E-value=1.5e-11 Score=110.34 Aligned_cols=106 Identities=12% Similarity=0.182 Sum_probs=84.6
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|.++..+++..+..+|+++|+|+..++.|++++... ++. .+++++.+|+.+.+.. +++||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl~-~~I~v~~gD~l~~~~~--~~~~D~I 94 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS--GLT-EQIDVRKGNGLAVIEK--KDAIDTI 94 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TCT-TTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCC-ceEEEEecchhhccCc--cccccEE
Confidence 4567999999999999999999877779999999999999999998765 333 4899999999887631 2369998
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++..- + . -...++++...+.|+++|.|+++.
T Consensus 95 viagm---G--g-~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 95 VIAGM---G--G-TLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp EEEEE---C--H-HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred EEeCC---c--h-HHHHHHHHHHHHHhCCCCEEEEEc
Confidence 85211 1 1 113468888899999999999985
No 154
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.27 E-value=4.7e-12 Score=115.25 Aligned_cols=112 Identities=18% Similarity=0.185 Sum_probs=85.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|..+..+++.+ ..+|+++|+++.+++.+++++... +. ..+++++++|+.+.... ++++||+|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~-~~~~fD~v 137 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNM--KR-RFKVFFRAQDSYGRHMD-LGKEFDVI 137 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTS--CC-SSEEEEEESCTTTSCCC-CSSCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhc--CC-CccEEEEECCccccccC-CCCCcCEE
Confidence 466799999999999999988874 458999999999999999987653 21 24799999998765211 25789999
Q ss_pred EEcCCCCC--CCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 205 IVDSSDPI--GPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 205 i~D~~~~~--~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
++...-+. .... ....+++.+.++|||||.+++...+
T Consensus 138 ~~~~~l~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 138 SSQFSFHYAFSTSE--SLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EEESCGGGGGSSHH--HHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EECchhhhhcCCHH--HHHHHHHHHHHhcCCCCEEEEEECC
Confidence 98643221 1111 1357899999999999999987533
No 155
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.27 E-value=5.5e-12 Score=115.01 Aligned_cols=115 Identities=13% Similarity=0.106 Sum_probs=83.2
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCCccEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~fDvI 204 (319)
++.+|||||||+|..+..+++.. .+|+++|+|+.+++.++++...........++.+..+|+.+.... .++++||+|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 56799999999999999999884 489999999999999988652210000124789999998876522 236799999
Q ss_pred EEc--CCCCCCCc--cccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVD--SSDPIGPA--QELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D--~~~~~~~~--~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++. ........ ..-....+++.++++|||||++++...
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 974 22211110 001135789999999999999998753
No 156
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.27 E-value=1.2e-11 Score=110.11 Aligned_cols=106 Identities=9% Similarity=0.141 Sum_probs=85.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|.++..+++..+..+|+++|+|+..++.|++++... ++. .+++++.+|+.+.+.. .++||+|
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~--gl~-~~I~~~~gD~l~~~~~--~~~~D~I 94 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH--GLT-SKIDVRLANGLSAFEE--ADNIDTI 94 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT--TCT-TTEEEEECSGGGGCCG--GGCCCEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCC-CcEEEEECchhhcccc--ccccCEE
Confidence 4567999999999999999999877789999999999999999998765 333 4899999999887632 3479998
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++..- + . ....+++....+.|+++|.|+++.
T Consensus 95 viaGm---G--g-~lI~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 95 TICGM---G--G-RLIADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp EEEEE---C--H-HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred EEeCC---c--h-HHHHHHHHHHHHHhCcCCEEEEEC
Confidence 85211 1 1 113468888899999999999985
No 157
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.27 E-value=1e-11 Score=118.83 Aligned_cols=121 Identities=15% Similarity=0.173 Sum_probs=85.3
Q ss_pred HHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccc-----cCCCCCCCeEEEE
Q 020933 112 YQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-----AVGFEDPRVTLHI 186 (319)
Q Consensus 112 Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~-----~~~~~~~~v~v~~ 186 (319)
+.+++..+ ......+|||||||+|.++..+++..+..+|++||+++.++++|++..... ..+....++++++
T Consensus 162 i~~il~~l---~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 162 VAQMIDEI---KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHH---CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHHHhc---CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 34555543 234667999999999999999987666667999999999999998753210 0122235899999
Q ss_pred cChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 187 GDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 187 ~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+|+.+......-..||+|+++.+.. . .. ....++.+.+.|||||.|++.
T Consensus 239 GD~~~lp~~d~~~~aDVVf~Nn~~F-~--pd--l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 239 GDFLSEEWRERIANTSVIFVNNFAF-G--PE--VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp CCTTSHHHHHHHHTCSEEEECCTTC-C--HH--HHHHHHHHHTTSCTTCEEEES
T ss_pred CcccCCccccccCCccEEEEccccc-C--ch--HHHHHHHHHHcCCCCcEEEEe
Confidence 9987653210014799999865431 1 11 345678899999999999975
No 158
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.26 E-value=1.9e-11 Score=114.77 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=83.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||+|||+|.++.. ++ +..+|+++|+|+.+++.+++++..+ ++. .+++++++|+.+++ ++||+|
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n--~l~-~~v~~~~~D~~~~~-----~~fD~V 262 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLN--KLE-HKIIPILSDVREVD-----VKGNRV 262 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHT--TCT-TTEEEEESCGGGCC-----CCEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHc--CCC-CcEEEEECChHHhc-----CCCcEE
Confidence 3567999999999999999 87 3579999999999999999998765 322 48999999998875 689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCc
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~ 244 (319)
++|++.. ..++++.+.++|+|||++++.+.+.
T Consensus 263 i~dpP~~--------~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 263 IMNLPKF--------AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp EECCTTT--------GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred EECCcHh--------HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 9986431 2368999999999999998865443
No 159
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.26 E-value=5.8e-11 Score=108.32 Aligned_cols=108 Identities=14% Similarity=0.178 Sum_probs=82.6
Q ss_pred CCceeeEeeccc---cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH--H-------
Q 020933 126 NPKKVLVIGGGD---GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF--L------- 193 (319)
Q Consensus 126 ~~~~VL~IG~G~---G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~--l------- 193 (319)
...+|||||||+ |.++..+.+..+..+|++||+|+.|++.+++.+.. .++++++.+|+.+. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT------CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC------CCCeEEEEeeCCCchhhhccchhh
Confidence 347999999999 98877776665668999999999999999998742 35899999998753 1
Q ss_pred HhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 194 KAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 194 ~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
...+..+||+|++...-+..+.. ....+++.++++|+|||.|++..
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~--~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPD--VVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTT--THHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCCCCCEEEEEechhhhCCcH--HHHHHHHHHHHhCCCCcEEEEEE
Confidence 12323589999976543332221 24579999999999999999875
No 160
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.26 E-value=1.1e-11 Score=116.89 Aligned_cols=108 Identities=19% Similarity=0.168 Sum_probs=83.2
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++++|||||||+|.++..+++. +..+|++||+++ +++.|++++... ++. .+++++.+|+.+.. .+.++||+|+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~--~~~-~~v~~~~~d~~~~~--~~~~~fD~Ii 138 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKAN--KLD-HVVTIIKGKVEEVE--LPVEKVDIII 138 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHT--TCT-TTEEEEESCTTTCC--CSSSCEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHc--CCC-CcEEEEECcHHHcc--CCCCceEEEE
Confidence 5679999999999999999988 457999999995 999999987654 332 47999999988762 3358999999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++........ .-....+++.+.++|||||+++...
T Consensus 139 s~~~~~~l~~-~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 139 SEWMGYCLFY-ESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp ECCCBBTBTB-TCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred EccccccccC-chhHHHHHHHHHHhCCCCCEEcccc
Confidence 8653222111 1124578899999999999997544
No 161
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.26 E-value=8.9e-12 Score=113.92 Aligned_cols=107 Identities=21% Similarity=0.352 Sum_probs=83.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|..+..+++..+ .+|+++|+++.+++.+++++... +. .++++++.+|+.+.. .++++||+|
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~--~~~~~fD~v 154 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQA--GL-ADNITVKYGSFLEIP--CEDNSYDFI 154 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHH--TC-TTTEEEEECCTTSCS--SCTTCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhc--CC-CcceEEEEcCcccCC--CCCCCEeEE
Confidence 4567999999999999999988643 58999999999999999987543 22 258999999987642 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+. ...+++.+.++|||||++++..
T Consensus 155 ~~~~~l~~~~~----~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 155 WSQDAFLHSPD----KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EEESCGGGCSC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EecchhhhcCC----HHHHHHHHHHHcCCCeEEEEEE
Confidence 97533211111 3679999999999999998874
No 162
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.26 E-value=4.2e-12 Score=116.53 Aligned_cols=110 Identities=19% Similarity=0.238 Sum_probs=82.3
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
.+.+|||||||+|.++..+++.. .+|+++|+++.+++.+++++....... ..+++++++|+.++. . +++||+|+
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~v~~~~~d~~~~~--~-~~~fD~v~ 155 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLG--WEVTALELSTSVLAAFRKRLAEAPADV-RDRCTLVQGDMSAFA--L-DKRFGTVV 155 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTT--CCEEEEESCHHHHHHHHHHHHTSCHHH-HTTEEEEECBTTBCC--C-SCCEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHhhccccc-ccceEEEeCchhcCC--c-CCCcCEEE
Confidence 45599999999999999999883 689999999999999999876530000 048999999988753 2 57899988
Q ss_pred EcCC-CCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 206 VDSS-DPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 206 ~D~~-~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
+... ....... ....+++.++++|||||+|++...+
T Consensus 156 ~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 156 ISSGSINELDEA--DRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp ECHHHHTTSCHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCcccccCCHH--HHHHHHHHHHHHcCCCcEEEEEeec
Confidence 5311 1111110 1357899999999999999987643
No 163
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.26 E-value=2.6e-11 Score=104.29 Aligned_cols=120 Identities=15% Similarity=0.127 Sum_probs=82.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCC--CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHH---------
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSS--VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL--------- 193 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~--~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l--------- 193 (319)
.+..+|||||||+|.++..+++..+ ..+|+++|+++.. ..++++++++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------------~~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------------PIPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------------CCTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------------CCCCceEEEccccchhhhhhccccc
Confidence 4567999999999999999998755 5799999999931 1246888999886542
Q ss_pred --------------HhCCCCCccEEEEcCCCCCCCc--cccc-----hHHHHHHHHHhcCCCcEEEEecCCcccChHHHH
Q 020933 194 --------------KAVPEGTYDAVIVDSSDPIGPA--QELF-----EKPFFESVAKALRPGGVVSTQAESIWLHMHIIE 252 (319)
Q Consensus 194 --------------~~~~~~~fDvIi~D~~~~~~~~--~~l~-----~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 252 (319)
...++++||+|+++...+.... .... ...+++.+.++|||||.+++... . .....
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~---~-~~~~~ 161 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY---L-GSQTN 161 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE---C-STTHH
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe---C-CCCHH
Confidence 0012568999999865433210 0000 12478889999999999998542 1 22345
Q ss_pred HHHHHHHhhcC
Q 020933 253 DIVANCRQIFK 263 (319)
Q Consensus 253 ~~~~~l~~~F~ 263 (319)
.+...++..|.
T Consensus 162 ~l~~~l~~~f~ 172 (201)
T 2plw_A 162 NLKTYLKGMFQ 172 (201)
T ss_dssp HHHHHHHTTEE
T ss_pred HHHHHHHHHHh
Confidence 56666777773
No 164
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.26 E-value=1.4e-11 Score=107.23 Aligned_cols=102 Identities=19% Similarity=0.185 Sum_probs=80.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+.+|||||||+|.++..+++.. +..+|+++|+++.+++.+++++... ..++++++.+|+...+.. .++||+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~v~~~~~d~~~~~~~--~~~fD~ 149 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL----GYDNVIVIVGDGTLGYEP--LAPYDR 149 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH----TCTTEEEEESCGGGCCGG--GCCEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCeEEEECCcccCCCC--CCCeeE
Confidence 356799999999999999998864 4468999999999999999987654 224699999998654321 468999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
|+++...+.. .+.+.++|||||.+++...
T Consensus 150 v~~~~~~~~~----------~~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 150 IYTTAAGPKI----------PEPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp EEESSBBSSC----------CHHHHHTEEEEEEEEEEES
T ss_pred EEECCchHHH----------HHHHHHHcCCCcEEEEEEC
Confidence 9987543321 2578899999999998754
No 165
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.26 E-value=1.6e-11 Score=116.96 Aligned_cols=108 Identities=16% Similarity=0.153 Sum_probs=83.7
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++++|||||||+|.++..+++.. ..+|++||++ .+++.|++++... ++. .+++++.+|+.++. . .++||+|
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s-~~~~~a~~~~~~~--~~~-~~v~~~~~d~~~~~--~-~~~~D~I 133 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEAT-KMADHARALVKAN--NLD-HIVEVIEGSVEDIS--L-PEKVDVI 133 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESS-TTHHHHHHHHHHT--TCT-TTEEEEESCGGGCC--C-SSCEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccH-HHHHHHHHHHHHc--CCC-CeEEEEECchhhcC--c-CCcceEE
Confidence 456899999999999999999884 4699999999 9999999987654 333 47999999987763 2 3789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+++......... .....+++.+.++|||||++++..
T Consensus 134 v~~~~~~~l~~e-~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 134 ISEWMGYFLLRE-SMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EECCCBTTBTTT-CTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEcChhhcccch-HHHHHHHHHHHhhCCCCeEEEEec
Confidence 986533222111 124568999999999999998654
No 166
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.26 E-value=2.2e-11 Score=114.49 Aligned_cols=107 Identities=18% Similarity=0.131 Sum_probs=81.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++++... ++ .++++++.+|+.++. .++++||+|
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~~--~~~~~~D~I 135 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLN--KL-EDTITLIKGKIEEVH--LPVEKVDVI 135 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHT--TC-TTTEEEEESCTTTSC--CSCSCEEEE
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHc--CC-CCcEEEEEeeHHHhc--CCCCcEEEE
Confidence 45679999999999999999988 456899999997 899999887654 22 258999999988752 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEE
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~ 239 (319)
+++....... .......+++.+.++|||||+++.
T Consensus 136 vs~~~~~~l~-~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 136 ISEWMGYFLL-FESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp EECCCBTTBT-TTCHHHHHHHHHHHHEEEEEEEES
T ss_pred EEcCchhhcc-CHHHHHHHHHHHHhhcCCCcEEEc
Confidence 9865211111 111134689999999999999983
No 167
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.26 E-value=1.8e-11 Score=105.39 Aligned_cols=100 Identities=15% Similarity=0.308 Sum_probs=79.8
Q ss_pred eeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcC
Q 020933 129 KVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDS 208 (319)
Q Consensus 129 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~ 208 (319)
+|||||||+|..+..+++.. .+|+++|+++.+++.+++.+... ..+++++.+|+.+.. .++++||+|++..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~~~~~fD~v~~~~ 102 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG--YEVTAVDQSSVGLAKAKQLAQEK-----GVKITTVQSNLADFD--IVADAWEGIVSIF 102 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHH-----TCCEEEECCBTTTBS--CCTTTCSEEEEEC
T ss_pred CEEEECCCCCHhHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhc-----CCceEEEEcChhhcC--CCcCCccEEEEEh
Confidence 99999999999999999873 58999999999999999987654 237999999987652 2357899999743
Q ss_pred CCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 209 SDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 209 ~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
. .. ... ....+++.+.++|+|||.+++..
T Consensus 103 ~-~~-~~~--~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 103 C-HL-PSS--LRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp C-CC-CHH--HHHHHHHHHHTTCCSSEEEEEEE
T ss_pred h-cC-CHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 11 111 13578999999999999999875
No 168
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.26 E-value=2.2e-11 Score=113.18 Aligned_cols=102 Identities=24% Similarity=0.261 Sum_probs=81.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
.++.+|||||||+|.++..+++..+ ..+|+++|+++.+++.+++++... + .++++++.+|+.+.+.. .++||+
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--g--~~~v~~~~~d~~~~~~~--~~~fD~ 147 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL--G--IENVIFVCGDGYYGVPE--FSPYDV 147 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT--T--CCSEEEEESCGGGCCGG--GCCEEE
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc--C--CCCeEEEECChhhcccc--CCCeEE
Confidence 3567999999999999999998754 367999999999999999987654 2 24699999998875432 468999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
|+++...+.. .+.+.+.|||||+++++..
T Consensus 148 Iv~~~~~~~~----------~~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 148 IFVTVGVDEV----------PETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EEECSBBSCC----------CHHHHHHEEEEEEEEEEBC
T ss_pred EEEcCCHHHH----------HHHHHHhcCCCcEEEEEEC
Confidence 9987543321 1577889999999999764
No 169
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.25 E-value=3.8e-11 Score=101.79 Aligned_cols=103 Identities=20% Similarity=0.310 Sum_probs=80.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|..+..+++.. .+++++|+++.+++.++++++ +++++.+|+.+.. .++++||+|
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~---------~~~~~~~d~~~~~--~~~~~~D~i 111 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQG--HDVLGTDLDPILIDYAKQDFP---------EARWVVGDLSVDQ--ISETDFDLI 111 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCT---------TSEEEECCTTTSC--CCCCCEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHCC--CcEEEEcCCHHHHHHHHHhCC---------CCcEEEcccccCC--CCCCceeEE
Confidence 466799999999999999999873 589999999999999998753 5789999987642 235789999
Q ss_pred EEcCC-CCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDSS-DPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~-~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++... ....... ....+++.+.++|+|||.+++...
T Consensus 112 ~~~~~~~~~~~~~--~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 112 VSAGNVMGFLAED--GREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp EECCCCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCcHHhhcChH--HHHHHHHHHHHHhCCCCEEEEEeC
Confidence 98622 1111111 125789999999999999998653
No 170
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.25 E-value=1.6e-11 Score=111.19 Aligned_cols=120 Identities=18% Similarity=0.235 Sum_probs=91.0
Q ss_pred CCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+.+|||+|||+|.++..+++. .+..+|+++|+++.+++.+++++......+ .++++++.+|+.+.. .++++||+
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~-~~~v~~~~~d~~~~~--~~~~~~D~ 174 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP-PDNWRLVVSDLADSE--LPDGSVDR 174 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC-CTTEEEECSCGGGCC--CCTTCEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC-CCcEEEEECchHhcC--CCCCceeE
Confidence 45679999999999999999985 446799999999999999999875320000 258999999987752 23578999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHh
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ 260 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 260 (319)
|+++..++ .++++.+.++|+|||.+++...+ .+.+..+.+.+++
T Consensus 175 v~~~~~~~---------~~~l~~~~~~L~pgG~l~~~~~~----~~~~~~~~~~l~~ 218 (280)
T 1i9g_A 175 AVLDMLAP---------WEVLDAVSRLLVAGGVLMVYVAT----VTQLSRIVEALRA 218 (280)
T ss_dssp EEEESSCG---------GGGHHHHHHHEEEEEEEEEEESS----HHHHHHHHHHHHH
T ss_pred EEECCcCH---------HHHHHHHHHhCCCCCEEEEEeCC----HHHHHHHHHHHHh
Confidence 99976542 25799999999999999987643 2445555565554
No 171
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.25 E-value=7.5e-12 Score=110.44 Aligned_cols=107 Identities=14% Similarity=0.145 Sum_probs=82.6
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|..+..+++.. .+++++|+++.+++.+++++... ..+++++++|+.++. . .++||+|
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~~~-----~~~~~~~~~d~~~~~--~-~~~fD~v 105 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFRSQ-----GLKPRLACQDISNLN--I-NRKFDLI 105 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHHHT-----TCCCEEECCCGGGCC--C-SCCEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHhhc-----CCCeEEEecccccCC--c-cCCceEE
Confidence 356799999999999999999873 58999999999999999987653 227999999987653 2 3789999
Q ss_pred EEcC-CCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDS-SDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~-~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++.. .-+..+.. -....+++.++++|+|||++++...
T Consensus 106 ~~~~~~l~~~~~~-~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 106 TCCLDSTNYIIDS-DDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp EECTTGGGGCCSH-HHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEcCccccccCCH-HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9754 22111110 1135789999999999999998653
No 172
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.25 E-value=1.7e-11 Score=107.68 Aligned_cols=105 Identities=15% Similarity=0.072 Sum_probs=81.2
Q ss_pred CCCceeeEeeccccHHHHHHHhcC-----CCceEEEEECChHHHHHHHhccccccC-CCCCCCeEEEEcChHHHH----H
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHS-----SVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFL----K 194 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~-----~~~~v~~VEid~~vi~~ak~~~~~~~~-~~~~~~v~v~~~D~~~~l----~ 194 (319)
.++.+|||||||+|..+..+++.. +..+|+++|+++.+++.+++++..... .....+++++.+|+.+.. .
T Consensus 79 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 158 (227)
T 2pbf_A 79 KPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK 158 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc
Confidence 356799999999999999998864 346899999999999999998765410 001358999999988743 2
Q ss_pred hCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 195 AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 195 ~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
. .++||+|+++...+ .+++.+.+.|+|||++++..
T Consensus 159 ~--~~~fD~I~~~~~~~----------~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 159 E--LGLFDAIHVGASAS----------ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp H--HCCEEEEEECSBBS----------SCCHHHHHHEEEEEEEEEEE
T ss_pred c--CCCcCEEEECCchH----------HHHHHHHHhcCCCcEEEEEE
Confidence 2 46899999876543 13578889999999999865
No 173
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.25 E-value=1.2e-11 Score=103.45 Aligned_cols=97 Identities=15% Similarity=0.169 Sum_probs=78.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|.++..+++.. .+|+++|+++.+++.++++. ++++++.+| .. .++++||+|
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~---------~~v~~~~~d-~~----~~~~~~D~v 79 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEKF---------DSVITLSDP-KE----IPDNSVDFI 79 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHHC---------TTSEEESSG-GG----SCTTCEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHhC---------CCcEEEeCC-CC----CCCCceEEE
Confidence 356799999999999999999875 38999999999999999872 478999999 22 236789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+ ....+++.+.++|||||.+++..
T Consensus 80 ~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 80 LFANSFHDMD----DKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp EEESCSTTCS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEccchhccc----CHHHHHHHHHHhcCCCCEEEEEE
Confidence 9754432221 14578999999999999998864
No 174
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.25 E-value=8.9e-12 Score=111.50 Aligned_cols=114 Identities=15% Similarity=0.157 Sum_probs=80.9
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccC-CCCCCC---------------------
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPR--------------------- 181 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~-~~~~~~--------------------- 181 (319)
.+.+|||+|||+|.++..+++. .+..+|+++|+|+.+++.|++++..... ++. .+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT-ARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH-HHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc-ccchhhhhhhhhcccccchhhhh
Confidence 4679999999999999999876 4457899999999999999987643200 000 01
Q ss_pred ----eE-------------EEEcChHHHHHh---CCCCCccEEEEcCCCCCCCcc-----ccchHHHHHHHHHhcCCCcE
Q 020933 182 ----VT-------------LHIGDGVAFLKA---VPEGTYDAVIVDSSDPIGPAQ-----ELFEKPFFESVAKALRPGGV 236 (319)
Q Consensus 182 ----v~-------------v~~~D~~~~l~~---~~~~~fDvIi~D~~~~~~~~~-----~l~~~~f~~~~~~~LkpgG~ 236 (319)
++ ++++|..+.... ...++||+|+++.+....... ......+++.+.++|+|||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 55 999998875421 014589999988643111110 01234789999999999999
Q ss_pred EEEe
Q 020933 237 VSTQ 240 (319)
Q Consensus 237 lv~~ 240 (319)
+++.
T Consensus 210 l~~~ 213 (250)
T 1o9g_A 210 IAVT 213 (250)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9984
No 175
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.24 E-value=2e-12 Score=114.65 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=80.6
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
.+.+|||||||+|..+..+++.. .+|+++|+|+.+++.+++++... +. .++++++++|+.++.. +++||+|+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~--~~-~~~~~~~~~d~~~~~~---~~~~D~v~ 149 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVY--GI-ADKIEFICGDFLLLAS---FLKADVVF 149 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT--TC-GGGEEEEESCHHHHGG---GCCCSEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc--CC-CcCeEEEECChHHhcc---cCCCCEEE
Confidence 56799999999999999999874 78999999999999999988654 21 1489999999998762 57899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++.+....... ...+..++++|+|||++++.
T Consensus 150 ~~~~~~~~~~~----~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 150 LSPPWGGPDYA----TAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp ECCCCSSGGGG----GSSSBCTTTSCSSCHHHHHH
T ss_pred ECCCcCCcchh----hhHHHHHHhhcCCcceeHHH
Confidence 87654322111 11345678899999987754
No 176
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.24 E-value=2.9e-10 Score=98.21 Aligned_cols=101 Identities=22% Similarity=0.232 Sum_probs=79.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.+++++... + .+++++++|+.++ +++||+|
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~--~---~~~~~~~~d~~~~-----~~~~D~v 116 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEF--K---GKFKVFIGDVSEF-----NSRVDIV 116 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGG--T---TSEEEEESCGGGC-----CCCCSEE
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHc--C---CCEEEEECchHHc-----CCCCCEE
Confidence 356799999999999999999873 458999999999999999998765 1 2799999998774 3589999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++|++...... -....+++.+.+.| ||++++.
T Consensus 117 ~~~~p~~~~~~--~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 117 IMNPPFGSQRK--HADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp EECCCCSSSST--TTTHHHHHHHHHHC--SEEEEEE
T ss_pred EEcCCCccccC--CchHHHHHHHHHhc--CcEEEEE
Confidence 99876433221 22457899999998 6766654
No 177
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.24 E-value=4.4e-11 Score=106.66 Aligned_cols=106 Identities=19% Similarity=0.094 Sum_probs=75.5
Q ss_pred CCCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCCc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~f 201 (319)
...+.+|||||||+|+.+..+++. .+..+|++||+++.+++...+.... ..++.++++|+...... ...++|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------r~nv~~i~~Da~~~~~~~~~~~~~ 147 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------RPNIFPLLADARFPQSYKSVVENV 147 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------CTTEEEEECCTTCGGGTTTTCCCE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------cCCeEEEEcccccchhhhccccce
Confidence 445789999999999999999875 3457999999999886433322211 14799999998764221 114689
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+|++|...+.. ...+.+.+.+.|||||.|++..
T Consensus 148 D~I~~d~a~~~~------~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 148 DVLYVDIAQPDQ------TDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp EEEEECCCCTTH------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEecCCChhH------HHHHHHHHHHhCCCCeEEEEEE
Confidence 999999765321 2234456666999999999864
No 178
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.24 E-value=1.8e-11 Score=107.43 Aligned_cols=116 Identities=24% Similarity=0.247 Sum_probs=85.1
Q ss_pred HHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCC---CCCCeEEEEc
Q 020933 112 YQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGF---EDPRVTLHIG 187 (319)
Q Consensus 112 Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~---~~~~v~v~~~ 187 (319)
+..++..+.. ....+.+|||||||+|..+..+++.. +..+|+++|+++.+++.+++++... +. ...+++++.+
T Consensus 64 ~~~~l~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~v~~~~~ 140 (226)
T 1i1n_A 64 HAYALELLFD-QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKD--DPTLLSSGRVQLVVG 140 (226)
T ss_dssp HHHHHHHTTT-TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--CTHHHHTSSEEEEES
T ss_pred HHHHHHHHHh-hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh--cccccCCCcEEEEEC
Confidence 3444444321 13356799999999999999998863 4468999999999999999887653 11 1247999999
Q ss_pred ChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 188 DGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 188 D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
|+...... .++||+|+++.... .+++.+.++|||||++++...
T Consensus 141 d~~~~~~~--~~~fD~i~~~~~~~----------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 141 DGRMGYAE--EAPYDAIHVGAAAP----------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp CGGGCCGG--GCCEEEEEECSBBS----------SCCHHHHHTEEEEEEEEEEES
T ss_pred CcccCccc--CCCcCEEEECCchH----------HHHHHHHHhcCCCcEEEEEEe
Confidence 98754321 46899999875432 235688899999999998754
No 179
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.23 E-value=1.1e-11 Score=109.08 Aligned_cols=101 Identities=23% Similarity=0.330 Sum_probs=78.7
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|..+..+++..+ +|+++|+++.+++.+++.+ ++++++.+|+.++. . +++||+|
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~-~~~~D~v 104 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL---------PDATLHQGDMRDFR--L-GRKFSAV 104 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC---------TTCEEEECCTTTCC--C-SSCEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC---------CCCEEEECCHHHcc--c-CCCCcEE
Confidence 4668999999999999999998753 8999999999999999875 36899999987652 2 5789999
Q ss_pred EEcC--CCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDS--SDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~--~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++.. ........ ....+++.++++|+|||.+++..
T Consensus 105 ~~~~~~~~~~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 105 VSMFSSVGYLKTTE--ELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp EECTTGGGGCCSHH--HHHHHHHHHHHTEEEEEEEEECC
T ss_pred EEcCchHhhcCCHH--HHHHHHHHHHHhcCCCeEEEEEe
Confidence 9532 11111111 13578999999999999999864
No 180
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.23 E-value=1.5e-11 Score=108.35 Aligned_cols=106 Identities=19% Similarity=0.188 Sum_probs=80.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCC------CceEEEEECChHHHHHHHhccccccC-CCCCCCeEEEEcChHHHHHhCC
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSS------VEKIDICEIDKMVVDVSKQFFPDVAV-GFEDPRVTLHIGDGVAFLKAVP 197 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~------~~~v~~VEid~~vi~~ak~~~~~~~~-~~~~~~v~v~~~D~~~~l~~~~ 197 (319)
....+|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++..... .+..++++++.+|+.+.+..
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-- 160 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP-- 160 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG--
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc--
Confidence 3457999999999999999988533 24899999999999999998764300 00025899999998874321
Q ss_pred CCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 198 EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 198 ~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
.++||+|+++...+. +.+.+.+.|||||++++...
T Consensus 161 ~~~fD~I~~~~~~~~----------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 161 NAPYNAIHVGAAAPD----------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp GCSEEEEEECSCBSS----------CCHHHHHTEEEEEEEEEEES
T ss_pred CCCccEEEECCchHH----------HHHHHHHHhcCCCEEEEEEe
Confidence 368999998765432 23678899999999998754
No 181
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.22 E-value=4e-11 Score=117.10 Aligned_cols=114 Identities=18% Similarity=0.237 Sum_probs=89.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+.+|||+|||+|+.+..+++.. +..+|+++|+|+.+++.+++++... + -. ++++++|+.++.... .++||+
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~--G--~~-v~~~~~Da~~l~~~~-~~~FD~ 173 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW--G--AP-LAVTQAPPRALAEAF-GTYFHR 173 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH--C--CC-CEEECSCHHHHHHHH-CSCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--C--Ce-EEEEECCHHHhhhhc-cccCCE
Confidence 356799999999999999998764 3368999999999999999998765 2 23 899999999876433 578999
Q ss_pred EEEcCCCCC-CC----cccc-------------chHHHHHHHHHhcCCCcEEEEecCCc
Q 020933 204 VIVDSSDPI-GP----AQEL-------------FEKPFFESVAKALRPGGVVSTQAESI 244 (319)
Q Consensus 204 Ii~D~~~~~-~~----~~~l-------------~~~~f~~~~~~~LkpgG~lv~~~~~~ 244 (319)
|++|++... +. +... ...++++.+.++|||||+|+..+++.
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 999987421 10 1100 12678999999999999999887664
No 182
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.22 E-value=3.5e-11 Score=105.79 Aligned_cols=98 Identities=23% Similarity=0.329 Sum_probs=78.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++... .+++++.+|+.+.+. ..++||+|
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~------~~v~~~~~d~~~~~~--~~~~fD~v 138 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY------NNIKLILGDGTLGYE--EEKPYDRV 138 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC------SSEEEEESCGGGCCG--GGCCEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc------CCeEEEECCcccccc--cCCCccEE
Confidence 456799999999999999999875 68999999999999999988653 289999999877332 14789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+++...+.. .+.+.++|+|||++++...
T Consensus 139 ~~~~~~~~~----------~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 139 VVWATAPTL----------LCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EESSBBSSC----------CHHHHHTEEEEEEEEEEEC
T ss_pred EECCcHHHH----------HHHHHHHcCCCcEEEEEEc
Confidence 987543221 2468899999999998754
No 183
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.22 E-value=9.2e-12 Score=109.73 Aligned_cols=93 Identities=10% Similarity=0.152 Sum_probs=76.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCC-CCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP-EGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~-~~~fDv 203 (319)
+.+.+|||||||+|.++..+++.. .+|+++|+++.+++.++++. ++++++++|+.+.+. .+ +++||+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~~-~~~~~~fD~ 114 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQA--ARWAAYDFSPELLKLARANA---------PHADVYEWNGKGELP-AGLGAPFGL 114 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHC---------TTSEEEECCSCSSCC-TTCCCCEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhC---------CCceEEEcchhhccC-CcCCCCEEE
Confidence 456899999999999999999883 68999999999999999872 478999999854432 22 578999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEE
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~ 239 (319)
|++.. + ...+++.+.++|||||.++.
T Consensus 115 v~~~~-~---------~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 115 IVSRR-G---------PTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EEEES-C---------CSGGGGGHHHHEEEEEEEEE
T ss_pred EEeCC-C---------HHHHHHHHHHHcCCCcEEEE
Confidence 99862 1 12578899999999999983
No 184
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.22 E-value=1.3e-10 Score=100.14 Aligned_cols=96 Identities=17% Similarity=0.192 Sum_probs=74.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||+|||+|.++..+++. +..+|++||+|+.+++.+++++. +++++++|+.++ +++||+|
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~---------~~~~~~~d~~~~-----~~~~D~v 114 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG---------GVNFMVADVSEI-----SGKYDTW 114 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------TSEEEECCGGGC-----CCCEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------CCEEEECcHHHC-----CCCeeEE
Confidence 35679999999999999999887 45689999999999999999763 689999998774 3689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEE
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~ 239 (319)
++|.+...... -....+++.+.+.| |+++++
T Consensus 115 ~~~~p~~~~~~--~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 115 IMNPPFGSVVK--HSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp EECCCC---------CHHHHHHHHHHE--EEEEEE
T ss_pred EECCCchhccC--chhHHHHHHHHHhc--CcEEEE
Confidence 99876433221 12357899999998 555554
No 185
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.21 E-value=4.1e-11 Score=113.37 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=83.4
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+++|||||||+|..+..+++..+..+++++|+ +.+++.+++++... +. .++++++.+|+.+.-... ++.||+|
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~-p~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGL--SG-SERIHGHGANLLDRDVPF-PTGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTC--TT-GGGEEEEECCCCSSSCCC-CCCCSEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhc--Cc-ccceEEEEccccccCCCC-CCCcCEE
Confidence 3568999999999999999998777789999999 99999999987654 22 258999999976531002 3689999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-+..+... ...+++.++++|||||.+++..
T Consensus 253 ~~~~vlh~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 253 WMSQFLDCFSEEE--VISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEESCSTTSCHHH--HHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEechhhhCCHHH--HHHHHHHHHHhcCCCcEEEEEe
Confidence 9754332222111 2468999999999999998753
No 186
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.21 E-value=2.7e-11 Score=107.39 Aligned_cols=102 Identities=23% Similarity=0.292 Sum_probs=78.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++..+ .+|+++|+++.+++.+++++... + -.+++++.+|+...+.. ...||+|
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~--~--~~~v~~~~~d~~~~~~~--~~~fD~I 162 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERA--G--VKNVHVILGDGSKGFPP--KAPYDVI 162 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHT--T--CCSEEEEESCGGGCCGG--GCCEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHc--C--CCCcEEEECCcccCCCC--CCCccEE
Confidence 3567999999999999999998755 78999999999999999987654 2 24699999997332221 2469999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
+++...+.. .+.+.+.|+|||++++....
T Consensus 163 i~~~~~~~~----------~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 163 IVTAGAPKI----------PEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp EECSBBSSC----------CHHHHHTEEEEEEEEEEECS
T ss_pred EECCcHHHH----------HHHHHHhcCCCcEEEEEEec
Confidence 987543221 24678899999999987643
No 187
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.21 E-value=4.7e-11 Score=100.85 Aligned_cols=96 Identities=11% Similarity=0.180 Sum_probs=73.6
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++.+|||||||+|.++..+++.. +|++||+|+.+++. .++++++++|+.+.+ ++++||+|+
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------------~~~~~~~~~d~~~~~---~~~~fD~i~ 83 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------------HRGGNLVRADLLCSI---NQESVDVVV 83 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------------CSSSCEEECSTTTTB---CGGGCSEEE
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------------ccCCeEEECChhhhc---ccCCCCEEE
Confidence 45699999999999999999875 89999999999986 136899999987743 247899999
Q ss_pred EcCCCCCCCcc-----ccchHHHHHHHHHhcCCCcEEEEec
Q 020933 206 VDSSDPIGPAQ-----ELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 206 ~D~~~~~~~~~-----~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++.+....... .....++++.+.+.| |||.+++..
T Consensus 84 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 84 FNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp ECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred ECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 87654321111 001236788888888 999998854
No 188
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.21 E-value=3.9e-11 Score=116.16 Aligned_cols=108 Identities=13% Similarity=0.158 Sum_probs=79.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHH-------HhccccccCCCCCCCeEEEEcChHH---HHH
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVS-------KQFFPDVAVGFEDPRVTLHIGDGVA---FLK 194 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a-------k~~~~~~~~~~~~~~v~v~~~D~~~---~l~ 194 (319)
..+.+|||||||+|.++..+++..+..+|++||+++.+++.| ++++... +....+++++++|... .+.
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~--Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLY--GMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHT--TBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHc--CCCCCceEEEEcCccccccccc
Confidence 356799999999999999999865556899999999999999 7766543 2112589999987542 121
Q ss_pred hCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 195 AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 195 ~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
.. .++||+|+++... ..+ . ....++.+.+.|||||.+++.
T Consensus 319 ~~-~~~FDvIvvn~~l-~~~--d--~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 319 EL-IPQCDVILVNNFL-FDE--D--LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HH-GGGCSEEEECCTT-CCH--H--HHHHHHHHHTTCCTTCEEEES
T ss_pred cc-cCCCCEEEEeCcc-ccc--c--HHHHHHHHHHhCCCCeEEEEe
Confidence 11 3689999976432 111 1 235788999999999999985
No 189
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.20 E-value=9.3e-12 Score=115.06 Aligned_cols=117 Identities=17% Similarity=0.164 Sum_probs=83.2
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCC---CCCCCeEEEEcChHHHHH--hC--C
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG---FEDPRVTLHIGDGVAFLK--AV--P 197 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~---~~~~~v~v~~~D~~~~l~--~~--~ 197 (319)
+++.+|||||||+|..+..+++. +..+|+++|+++.+++.+++.+...... ....+++++++|+.+... .. +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 35679999999999999999876 3579999999999999999887542100 012479999999877520 01 1
Q ss_pred CCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 198 EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 198 ~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+++||+|++...-++.....-....+++.+.++|||||++++...
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 358999998654332200000124789999999999999998753
No 190
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.20 E-value=2.8e-11 Score=114.03 Aligned_cols=106 Identities=16% Similarity=0.146 Sum_probs=80.3
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++.+|||||||+|.++..+++. +..+|++||+++ +++.+++.+... ++ .++++++.+|..++. . .++||+|+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~--~l-~~~v~~~~~d~~~~~--~-~~~~D~Iv 121 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSN--NL-TDRIVVIPGKVEEVS--L-PEQVDIII 121 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHT--TC-TTTEEEEESCTTTCC--C-SSCEEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHc--CC-CCcEEEEEcchhhCC--C-CCceeEEE
Confidence 5679999999999999999987 457999999997 778998887654 22 258999999987652 2 46899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++......... ...+.+..+.++|||||+++++.
T Consensus 122 s~~~~~~~~~~--~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 122 SEPMGYMLFNE--RMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp ECCCBTTBTTT--SHHHHHHHGGGGEEEEEEEESCE
T ss_pred EeCchhcCChH--HHHHHHHHHHhhcCCCeEEEEec
Confidence 87542211111 13467888899999999998654
No 191
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.20 E-value=6e-11 Score=107.36 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=83.5
Q ss_pred CCceeeEeeccccHHHHHHHhc-------CC-----CceEEEEECCh---HHH-----------HHHHhccccccC----
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH-------SS-----VEKIDICEIDK---MVV-----------DVSKQFFPDVAV---- 175 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~-------~~-----~~~v~~VEid~---~vi-----------~~ak~~~~~~~~---- 175 (319)
++.+|||||+|+|..+..+++. .| ..+++++|.+| +.+ +.+++.+.....
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999988876542 33 25899999987 333 345554332100
Q ss_pred ----CCC--CCCeEEEEcChHHHHHhCCC---CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 176 ----GFE--DPRVTLHIGDGVAFLKAVPE---GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 176 ----~~~--~~~v~v~~~D~~~~l~~~~~---~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.++ ..+++++.+|+.+.+...+. ..||+|+.|.+.|...+ .+++.++|+.++++|+|||+|++-+
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p-~lw~~~~l~~l~~~L~pGG~l~tys 213 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNP-DMWTQNLFNAMARLARPGGTLATFT 213 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCG-GGCCHHHHHHHHHHEEEEEEEEESC
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccCh-hhcCHHHHHHHHHHcCCCcEEEEEe
Confidence 022 24678999999998876522 27999999987765443 6788999999999999999999643
No 192
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.20 E-value=1.6e-11 Score=105.82 Aligned_cols=114 Identities=12% Similarity=0.081 Sum_probs=81.7
Q ss_pred hHHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcCh
Q 020933 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG 189 (319)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~ 189 (319)
..|.....++ +.+.+|||||||+|.++..++...|..+|+++|+|+.+++++++++... +..+ ++++ .|.
T Consensus 38 ~fY~~~~~~l-----~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~--g~~~-~v~~--~d~ 107 (200)
T 3fzg_A 38 DFYTYVFGNI-----KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL--KTTI-KYRF--LNK 107 (200)
T ss_dssp HHHHHHHHHS-----CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS--CCSS-EEEE--ECC
T ss_pred HHHHHHHhhc-----CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc--CCCc-cEEE--ecc
Confidence 3466666654 4578999999999999999988766779999999999999999998765 2111 4555 666
Q ss_pred HHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 190 VAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 190 ~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
.... +.++||+|+....-|.-. . .+..+..+.+.|+|||++|..
T Consensus 108 ~~~~---~~~~~DvVLa~k~LHlL~-~---~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 108 ESDV---YKGTYDVVFLLKMLPVLK-Q---QDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp HHHH---TTSEEEEEEEETCHHHHH-H---TTCCHHHHHHTCEEEEEEEEE
T ss_pred cccC---CCCCcChhhHhhHHHhhh-h---hHHHHHHHHHHhCCCCEEEEe
Confidence 5442 368899999643322111 0 011244799999999999854
No 193
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.19 E-value=2.3e-11 Score=109.29 Aligned_cols=102 Identities=18% Similarity=0.311 Sum_probs=78.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++... .+ ++.+|+.+.. .++++||+|
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~--------~~--~~~~d~~~~~--~~~~~fD~v 118 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQERG--FEVVLVDPSKEMLEVAREKGV--------KN--VVEAKAEDLP--FPSGAFEAV 118 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHHTC--------SC--EEECCTTSCC--SCTTCEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHcC--CeEEEEeCCHHHHHHHHhhcC--------CC--EEECcHHHCC--CCCCCEEEE
Confidence 366899999999999999999873 589999999999999998753 12 7888876642 236789999
Q ss_pred EEcCC-CCCCCccccchHHHHHHHHHhcCCCcEEEEecCCc
Q 020933 205 IVDSS-DPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (319)
Q Consensus 205 i~D~~-~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~ 244 (319)
++... .+... . ...+++.+.++|||||.+++...+.
T Consensus 119 ~~~~~~~~~~~--~--~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 119 LALGDVLSYVE--N--KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp EECSSHHHHCS--C--HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred EEcchhhhccc--c--HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 97432 11111 1 4578999999999999999876543
No 194
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.19 E-value=3e-11 Score=104.69 Aligned_cols=98 Identities=20% Similarity=0.258 Sum_probs=77.3
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++.+|||||||+|..+..+ +..+++++|+++.+++.+++++ ++++++++|+.+.. .++++||+|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA---------PEATWVRAWGEALP--FPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC---------TTSEEECCCTTSCC--SCSSCEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcccccCC--CCCCcEEEEE
Confidence 6679999999999998887 2348999999999999999875 36789999977642 2357899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+...-...+ ....+++.+.++|||||.+++...
T Consensus 101 ~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 101 LFTTLEFVE----DVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp EESCTTTCS----CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EcChhhhcC----CHHHHHHHHHHHcCCCCEEEEEec
Confidence 754332221 135799999999999999998753
No 195
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.19 E-value=8.9e-12 Score=111.59 Aligned_cols=82 Identities=13% Similarity=0.130 Sum_probs=64.0
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH-HHHhCC---CCCc
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA-FLKAVP---EGTY 201 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~-~l~~~~---~~~f 201 (319)
.+.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++... ++. .+++++++|+.+ ++...+ +++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~-~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN--NLS-DLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--TCT-TTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc--CCC-ccEEEEEcchhhhhhhhhhcccCCcc
Confidence 467999999999999999887644578999999999999999987654 222 369999999766 232222 2589
Q ss_pred cEEEEcCCC
Q 020933 202 DAVIVDSSD 210 (319)
Q Consensus 202 DvIi~D~~~ 210 (319)
|+|+++++.
T Consensus 142 D~i~~npp~ 150 (254)
T 2h00_A 142 DFCMCNPPF 150 (254)
T ss_dssp SEEEECCCC
T ss_pred cEEEECCCC
Confidence 999998653
No 196
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.19 E-value=6e-11 Score=115.63 Aligned_cols=128 Identities=16% Similarity=0.160 Sum_probs=94.4
Q ss_pred CCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+.+|||+|||+|+.+..+++. .+..+|+++|+|+..++.+++++... + -.++.++++|+.++.... +++||+
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~--g--~~nv~v~~~Da~~l~~~~-~~~FD~ 178 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW--G--VSNAIVTNHAPAELVPHF-SGFFDR 178 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH--T--CSSEEEECCCHHHHHHHH-TTCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc--C--CCceEEEeCCHHHhhhhc-cccCCE
Confidence 45679999999999999999875 33468999999999999999998765 2 247999999999876433 578999
Q ss_pred EEEcCCCCC-CC----cc--------c-----cchHHHHHHHHHhcCCCcEEEEecCCccc--ChHHHHHHHHH
Q 020933 204 VIVDSSDPI-GP----AQ--------E-----LFEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVAN 257 (319)
Q Consensus 204 Ii~D~~~~~-~~----~~--------~-----l~~~~f~~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~~~~~ 257 (319)
|++|++... +. +. . -...++++.+.++|||||+|+..+++... +.+.+..+++.
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~ 252 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVEN 252 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHh
Confidence 999986321 10 00 0 01237899999999999999988766432 23344444443
No 197
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.19 E-value=6.9e-11 Score=107.20 Aligned_cols=106 Identities=18% Similarity=0.206 Sum_probs=75.1
Q ss_pred CCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH-HHHhCCCCCcc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA-FLKAVPEGTYD 202 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~-~l~~~~~~~fD 202 (319)
..++.+|||||||+|.++..+++.. .+|++||+|+.+++.+++++... .++....|... ..... +++||
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g--~~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~~-~~~fD 112 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERG--ASVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKEL-AGHFD 112 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGGG-TTCCS
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHhc-------cceeeeeeccccccccc-CCCcc
Confidence 3456799999999999999999874 68999999999999999987542 23333333221 00111 46899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+|+++..-....... ...+++.+.++| |||+++++..
T Consensus 113 ~Vv~~~~l~~~~~~~--~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 113 FVLNDRLINRFTTEE--ARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp EEEEESCGGGSCHHH--HHHHHHHHHHHH-TTSEEEEEEE
T ss_pred EEEEhhhhHhCCHHH--HHHHHHHHHHhC-cCcEEEEEec
Confidence 999875432111111 346899999999 9999998763
No 198
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.19 E-value=2.7e-11 Score=115.29 Aligned_cols=120 Identities=18% Similarity=0.145 Sum_probs=86.9
Q ss_pred hHHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcCh
Q 020933 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG 189 (319)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~ 189 (319)
..|++.|..-.- .-+.+.|||||||+|.++..+++. +..+|++||.++ +++.|++.+..+ ++. .+++++.+|.
T Consensus 69 ~aY~~Ai~~~~~--~~~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n--~~~-~~i~~i~~~~ 141 (376)
T 4hc4_A 69 DAYRLGILRNWA--ALRGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFN--GLE-DRVHVLPGPV 141 (376)
T ss_dssp HHHHHHHHTTHH--HHTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHT--TCT-TTEEEEESCT
T ss_pred HHHHHHHHhCHH--hcCCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHc--CCC-ceEEEEeeee
Confidence 456666643110 115679999999999999888887 467999999997 788899887655 444 4899999998
Q ss_pred HHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 190 VAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 190 ~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
.++- . +++||+||+........... ....++....+.|||||+++-.
T Consensus 142 ~~~~--l-pe~~DvivsE~~~~~l~~e~-~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 142 ETVE--L-PEQVDAIVSEWMGYGLLHES-MLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTCC--C-SSCEEEEECCCCBTTBTTTC-SHHHHHHHHHHHEEEEEEEESC
T ss_pred eeec--C-CccccEEEeecccccccccc-hhhhHHHHHHhhCCCCceECCc
Confidence 7752 3 57899999865543222221 2456788888999999998744
No 199
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.19 E-value=4.3e-11 Score=109.52 Aligned_cols=111 Identities=13% Similarity=0.119 Sum_probs=74.7
Q ss_pred CCceeeEeeccccHHHHHH----HhcCCCceE--EEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh----
Q 020933 126 NPKKVLVIGGGDGGVLREV----SRHSSVEKI--DICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA---- 195 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l----~~~~~~~~v--~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~---- 195 (319)
++.+|||||||+|.++..+ +...+..+| ++||+++.|++.+++.+.... +..+-++.+..+|+.++...
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS-NLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS-SCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc-CCCcceEEEEecchhhhhhhhccc
Confidence 4569999999999766543 332233444 999999999999998864310 11222345566777665421
Q ss_pred CCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 196 VPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 196 ~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.++++||+|++...-...+. ...+++.++++|||||.+++..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d----~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD----IPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC----HHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCceeEEEEeeeeeecCC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 23678999997543322221 3468999999999999999864
No 200
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.18 E-value=1.1e-10 Score=114.63 Aligned_cols=127 Identities=21% Similarity=0.266 Sum_probs=94.2
Q ss_pred CCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.+.+|||+|||+|+.+..+++.. +..+|+++|+++.+++.+++++... + -.+++++++|+..+.... .++||+|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~--g--~~nv~~~~~D~~~~~~~~-~~~fD~I 191 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC--G--ISNVALTHFDGRVFGAAV-PEMFDAI 191 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH--T--CCSEEEECCCSTTHHHHS-TTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--C--CCcEEEEeCCHHHhhhhc-cccCCEE
Confidence 56799999999999999999864 3468999999999999999998765 2 247999999998875433 5789999
Q ss_pred EEcCCCCC-CC----ccc-------------cchHHHHHHHHHhcCCCcEEEEecCCccc--ChHHHHHHHHH
Q 020933 205 IVDSSDPI-GP----AQE-------------LFEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVAN 257 (319)
Q Consensus 205 i~D~~~~~-~~----~~~-------------l~~~~f~~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~~~~~ 257 (319)
++|++... +. +.. -...++++.+.++|||||+|+..+++... +.+.+..+++.
T Consensus 192 l~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~ 264 (479)
T 2frx_A 192 LLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKET 264 (479)
T ss_dssp EEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHH
T ss_pred EECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHH
Confidence 99976421 11 100 01246889999999999999998765432 23344444443
No 201
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.18 E-value=4.9e-11 Score=103.94 Aligned_cols=101 Identities=18% Similarity=0.152 Sum_probs=78.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|..+..+++. + .+++++|+++.+++.+++.+. +++.+|+.++....++++||+|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~-----------~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD-----------HVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS-----------EEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC-----------cEEEcchhhcCCCCCCCccCEE
Confidence 46689999999999999999988 4 789999999999999987642 6788887654222235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
++...-...+ ....+++.+.++|+|||.+++...
T Consensus 98 ~~~~~l~~~~----~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 98 IFGDVLEHLF----DPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp EEESCGGGSS----CHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred EECChhhhcC----CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 9753321111 135789999999999999998753
No 202
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.18 E-value=8.5e-11 Score=100.48 Aligned_cols=120 Identities=13% Similarity=0.091 Sum_probs=80.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCC---------ceEEEEECChHHHHHHHhccccccCCCCCCCeEEE-EcChHHHHH
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSV---------EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLH-IGDGVAFLK 194 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~---------~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~-~~D~~~~l~ 194 (319)
..+.+|||||||+|.++..+++..+. .+|+++|+++.. ..++++++ .+|......
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------------cCCCCeEEEeccCCCHHH
Confidence 45679999999999999999987543 689999999841 11467888 888654321
Q ss_pred ------hCCCCCccEEEEcCCCCCCCccccc-------hHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhh
Q 020933 195 ------AVPEGTYDAVIVDSSDPIGPAQELF-------EKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (319)
Q Consensus 195 ------~~~~~~fDvIi~D~~~~~~~~~~l~-------~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 261 (319)
..++++||+|+++............ ...+++.+.++|||||.+++.... ......+.+.++..
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~----~~~~~~~~~~l~~~ 161 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA----GSQSRRLQRRLTEE 161 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC----SGGGHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC----CccHHHHHHHHHHH
Confidence 1224589999987643221100000 136899999999999999986422 12234555666667
Q ss_pred cC
Q 020933 262 FK 263 (319)
Q Consensus 262 F~ 263 (319)
|.
T Consensus 162 f~ 163 (196)
T 2nyu_A 162 FQ 163 (196)
T ss_dssp EE
T ss_pred hc
Confidence 73
No 203
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.18 E-value=2.4e-11 Score=111.08 Aligned_cols=126 Identities=10% Similarity=0.039 Sum_probs=83.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEE--EcChHHHHHhCCCCCcc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLH--IGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~--~~D~~~~l~~~~~~~fD 202 (319)
.+..+|||||||+|+.+..+++. .+|++||+++ ++..+++.. .....+ ..++.++ ++|+.++ ++++||
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~-~~~~~~-~~~v~~~~~~~D~~~l----~~~~fD 150 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKP-RLVETF-GWNLITFKSKVDVTKM----EPFQAD 150 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCC-CCCCCT-TGGGEEEECSCCGGGC----CCCCCS
T ss_pred CCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhch-hhhhhc-CCCeEEEeccCcHhhC----CCCCcC
Confidence 35679999999999999999987 5799999999 433332211 000011 1278999 8998764 357899
Q ss_pred EEEEcCCCCCCCccccc---hHHHHHHHHHhcCCCc--EEEEecCCcccChHHHHHHHHHHHhhcC
Q 020933 203 AVIVDSSDPIGPAQELF---EKPFFESVAKALRPGG--VVSTQAESIWLHMHIIEDIVANCRQIFK 263 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~---~~~f~~~~~~~LkpgG--~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 263 (319)
+|++|.. ......... ...+++.+.++||||| .|++..-++. ...+..+++.+++.|.
T Consensus 151 ~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~--~~~~~~~l~~l~~~f~ 213 (276)
T 2wa2_A 151 TVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPY--SCDVLEALMKMQARFG 213 (276)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCC--SHHHHHHHHHHHHHHC
T ss_pred EEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCC--chhHHHHHHHHHHHcC
Confidence 9999876 332211100 1137888999999999 9988653322 2233456677788884
No 204
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.17 E-value=3.6e-11 Score=104.91 Aligned_cols=110 Identities=15% Similarity=0.060 Sum_probs=76.7
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHH----HhccccccCCCCCCCeEEEEcChHHHHHhCCCCC
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVS----KQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGT 200 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~a----k~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~ 200 (319)
..+.+|||||||+|.++..+++..+..+|++||+++.+++.+ ++..... ..++++++++|+.+.. ..++.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~----~~~~v~~~~~d~~~l~--~~~~~ 99 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKG----GLPNLLYLWATAERLP--PLSGV 99 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGT----CCTTEEEEECCSTTCC--SCCCE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhc----CCCceEEEecchhhCC--CCCCC
Confidence 356799999999999999999987778999999999988753 3332221 2358999999988742 22344
Q ss_pred ccEEEEcCCCCCCCccc-cchHHHHHHHHHhcCCCcEEEEec
Q 020933 201 YDAVIVDSSDPIGPAQE-LFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~-l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|.|++..........+ .....+++.++++|||||.+++..
T Consensus 100 -d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 100 -GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp -EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred -CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 7777443211000000 001478999999999999999853
No 205
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.17 E-value=7.3e-11 Score=115.03 Aligned_cols=117 Identities=21% Similarity=0.313 Sum_probs=88.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCC-ceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSV-EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+.+|||+|||+|+.+..+++..+. .+|+++|+++..++.+++++... .-++++++++|+.++....++++||+
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~----g~~~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM----GIKIVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT----TCCSEEEECSCTTCCSSSSCSSCEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc----CCCcEEEEEcChhhcchhhccCCCCE
Confidence 35679999999999999999986443 68999999999999999987754 22479999999877643232368999
Q ss_pred EEEcCCCCC-CC----cc--------c---c--chHHHHHHHHHhcCCCcEEEEecCCcc
Q 020933 204 VIVDSSDPI-GP----AQ--------E---L--FEKPFFESVAKALRPGGVVSTQAESIW 245 (319)
Q Consensus 204 Ii~D~~~~~-~~----~~--------~---l--~~~~f~~~~~~~LkpgG~lv~~~~~~~ 245 (319)
|++|++... +. +. . + ....+++.+.++|||||.+++.+++..
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 999876421 11 00 0 0 115789999999999999998776543
No 206
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.17 E-value=9.4e-12 Score=111.31 Aligned_cols=115 Identities=10% Similarity=0.046 Sum_probs=80.2
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCC-------------------------CC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE-------------------------DP 180 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~-------------------------~~ 180 (319)
++.+|||||||+|.++..+++... .+|+++|+++.+++.+++++......++ ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 467999999999999999887753 5899999999999999988754210000 01
Q ss_pred Ce-EEEEcChHHHHHhC--CCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 181 RV-TLHIGDGVAFLKAV--PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 181 ~v-~v~~~D~~~~l~~~--~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++ +++.+|+.+..... ..++||+|++...-...+...-....+++.+.++|||||.+++..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 27 89999987653211 127899999754321000010013578999999999999998764
No 207
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.17 E-value=6.3e-12 Score=113.59 Aligned_cols=114 Identities=13% Similarity=0.090 Sum_probs=76.7
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCC-------------------------CC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE-------------------------DP 180 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~-------------------------~~ 180 (319)
++.+|||||||+|..+..+++. +..+|+++|+|+.+++.+++++......++ ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 4578999999999877766655 345899999999999999987643211111 01
Q ss_pred CeE-EEEcChHHHHH--hCCCCCccEEEEcCCCCC-CCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 181 RVT-LHIGDGVAFLK--AVPEGTYDAVIVDSSDPI-GPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 181 ~v~-v~~~D~~~~l~--~~~~~~fDvIi~D~~~~~-~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+++ ++.+|..+... ....++||+|++...-.. .+... .....++.++++|||||.|++..
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~-~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLD-AYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHH-HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHH-HHHHHHHHHHHHcCCCcEEEEEE
Confidence 243 88999776321 112468999997543221 11100 12467999999999999999874
No 208
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.16 E-value=7.6e-11 Score=110.16 Aligned_cols=107 Identities=19% Similarity=0.237 Sum_probs=81.1
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++++|||||||+|.++..+++. +..+|++||++ .+++.|++.+... ++ ..+++++.+|+.++. .+.++||+|+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~~--~~~~~~D~Iv 110 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELN--GF-SDKITLLRGKLEDVH--LPFPKVDIII 110 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHT--TC-TTTEEEEESCTTTSC--CSSSCEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHc--CC-CCCEEEEECchhhcc--CCCCcccEEE
Confidence 5679999999999999999987 45689999999 5899999887654 33 248999999987752 2347899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++........ ......+++.+.++|||||+++..
T Consensus 111 s~~~~~~l~~-~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 111 SEWMGYFLLY-ESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp ECCCBTTBST-TCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EeCchhhccc-HHHHHHHHHHHHhhcCCCeEEEEe
Confidence 8754221111 112346889999999999999843
No 209
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.16 E-value=1.1e-10 Score=111.23 Aligned_cols=105 Identities=14% Similarity=0.163 Sum_probs=85.8
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccC-------------CCCCCCeEEEEcChHHH
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-------------GFEDPRVTLHIGDGVAF 192 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~-------------~~~~~~v~v~~~D~~~~ 192 (319)
.+.+|||+|||+|..+..+++..+..+|+++|+|+..++.+++++..+.. ++ .+++++++|+.++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl--~~i~v~~~Da~~~ 124 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE--KTIVINHDDANRL 124 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS--SEEEEEESCHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC--CceEEEcCcHHHH
Confidence 56799999999999999999875556899999999999999999865410 12 2399999999999
Q ss_pred HHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 193 LKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 193 l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+... .++||+|++|++.. ..+|++.+.+.|++||++++.+
T Consensus 125 ~~~~-~~~fD~I~lDP~~~--------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 125 MAER-HRYFHFIDLDPFGS--------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHS-TTCEEEEEECCSSC--------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhc-cCCCCEEEeCCCCC--------HHHHHHHHHHhcCCCCEEEEEe
Confidence 8764 46899999886421 2578999999999999888754
No 210
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.16 E-value=1.1e-10 Score=112.89 Aligned_cols=115 Identities=17% Similarity=0.285 Sum_probs=88.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||+|||+|+.+..+++..+..+|+++|+++..++.+++++... + .+++++++|+.++....++++||+|
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~--g---~~~~~~~~D~~~~~~~~~~~~fD~V 319 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL--G---MKATVKQGDGRYPSQWCGEQQFDRI 319 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT--T---CCCEEEECCTTCTHHHHTTCCEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc--C---CCeEEEeCchhhchhhcccCCCCEE
Confidence 4567999999999999999998765579999999999999999988764 2 2478999999876532234789999
Q ss_pred EEcCCCCC-CC---ccc--------------cchHHHHHHHHHhcCCCcEEEEecCCc
Q 020933 205 IVDSSDPI-GP---AQE--------------LFEKPFFESVAKALRPGGVVSTQAESI 244 (319)
Q Consensus 205 i~D~~~~~-~~---~~~--------------l~~~~f~~~~~~~LkpgG~lv~~~~~~ 244 (319)
++|++... +. ... -...++++.+.+.|||||++++.+++.
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 99876421 11 000 012478999999999999999987654
No 211
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.15 E-value=8.7e-11 Score=112.39 Aligned_cols=104 Identities=25% Similarity=0.272 Sum_probs=86.6
Q ss_pred CCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCC-eEEEEcChHHHHH-hCCCCCcc
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPR-VTLHIGDGVAFLK-AVPEGTYD 202 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~-v~v~~~D~~~~l~-~~~~~~fD 202 (319)
.+.+|||++||+|.++.++++.. +..+|++||+|+..++.+++++..+ ++++ + ++++.+|+.+++. .. .++||
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N--gl~~-~~v~v~~~Da~~~l~~~~-~~~fD 127 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN--NIPE-DRYEIHGMEANFFLRKEW-GFGFD 127 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT--TCCG-GGEEEECSCHHHHHHSCC-SSCEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh--CCCC-ceEEEEeCCHHHHHHHhh-CCCCc
Confidence 45799999999999999998863 3478999999999999999998876 3332 4 9999999999987 65 56899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|++|++. . ..++++.+.+.|++||++++..
T Consensus 128 ~V~lDP~g---~-----~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDPFG---T-----PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECCSS---C-----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCc---C-----HHHHHHHHHHHhCCCCEEEEEe
Confidence 99999732 1 2468999999999999988764
No 212
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.15 E-value=5e-11 Score=107.35 Aligned_cols=97 Identities=21% Similarity=0.283 Sum_probs=77.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|..+..+++..+..+|+++|+++.+++.+++.. +++.++.+|+.+.. .++++||+|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------~~~~~~~~d~~~~~--~~~~~fD~v 152 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------PQVTFCVASSHRLP--FSDTSMDAI 152 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC---------TTSEEEECCTTSCS--BCTTCEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC---------CCcEEEEcchhhCC--CCCCceeEE
Confidence 3567999999999999999998755578999999999999999864 35789999976542 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
++.... .+++.+.++|||||.+++....
T Consensus 153 ~~~~~~-----------~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 153 IRIYAP-----------CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp EEESCC-----------CCHHHHHHHEEEEEEEEEEEEC
T ss_pred EEeCCh-----------hhHHHHHHhcCCCcEEEEEEcC
Confidence 964321 2589999999999999987533
No 213
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.14 E-value=9.3e-11 Score=109.96 Aligned_cols=108 Identities=19% Similarity=0.255 Sum_probs=83.0
Q ss_pred CceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEE
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~ 206 (319)
+.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++... +. ..+++++.+|..+..... .+.||+|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~-~~~~D~v~~ 254 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH--DL-GGRVEFFEKNLLDARNFE-GGAADVVML 254 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--TC-GGGEEEEECCTTCGGGGT-TCCEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc--CC-CCceEEEeCCcccCcccC-CCCccEEEE
Confidence 78999999999999999998877789999999 88999999887653 22 248999999987653112 466999997
Q ss_pred cCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 207 D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
...-+..+... ...+++.++++|+|||.+++..
T Consensus 255 ~~vlh~~~~~~--~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 255 NDCLHYFDARE--AREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp ESCGGGSCHHH--HHHHHHHHHHTEEEEEEEEEEE
T ss_pred ecccccCCHHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 44322222111 2578999999999999998753
No 214
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.14 E-value=1.4e-10 Score=108.15 Aligned_cols=106 Identities=18% Similarity=0.240 Sum_probs=82.0
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
...+|||||||+|..+..+++..+..+++++|+ +.+++.+++++... ++ .++++++.+|..+ ..+ ..||+|+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~---~~p-~~~D~v~ 240 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT--GL-SGRAQVVVGSFFD---PLP-AGAGGYV 240 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TC-TTTEEEEECCTTS---CCC-CSCSEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc--Cc-CcCeEEecCCCCC---CCC-CCCcEEE
Confidence 457999999999999999998777789999999 99999999987653 22 3589999999763 222 3899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+...-+..+.. ....+++.++++|+|||.+++..
T Consensus 241 ~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 241 LSAVLHDWDDL--SAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EehhhccCCHH--HHHHHHHHHHHhcCCCCEEEEEe
Confidence 74432222211 12578999999999999998754
No 215
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.14 E-value=1e-10 Score=105.44 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=79.0
Q ss_pred CCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChH------HHHHHHhccccccCCCCCCCeEEEEcC-hHHHHHhC
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKM------VVDVSKQFFPDVAVGFEDPRVTLHIGD-GVAFLKAV 196 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~------vi~~ak~~~~~~~~~~~~~~v~v~~~D-~~~~l~~~ 196 (319)
.++.+|||||||+|..+..+++. .+..+|+++|+++. +++.+++++... +. .++++++.+| ........
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG--PL-GDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS--TT-GGGEEEECSCCTTTCCGGG
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc--CC-CCceEEEECChhhhccCCC
Confidence 46679999999999999999987 35579999999997 899999987643 21 2589999998 22111111
Q ss_pred CCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 197 PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 197 ~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++++||+|++...-...+. ...+++.+.++++|||.+++..
T Consensus 119 ~~~~fD~v~~~~~l~~~~~----~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFAS----ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TTCCCSEEEEESCGGGSSC----HHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCEEEEEEccchhhCCC----HHHHHHHHHHHhCCCCEEEEEE
Confidence 3578999997543221111 2346777777788899999864
No 216
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.14 E-value=5.5e-11 Score=107.02 Aligned_cols=98 Identities=17% Similarity=0.218 Sum_probs=76.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|..+..+++. ..+|+++|+++.+++.+++. .+++++++|+.++. .++++||+|
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~----------~~~~~~~~d~~~~~--~~~~~fD~v 98 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ--GLFVYAVEPSIVMRQQAVVH----------PQVEWFTGYAENLA--LPDKSVDGV 98 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT--TCEEEEECSCHHHHHSSCCC----------TTEEEECCCTTSCC--SCTTCBSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhC--CCEEEEEeCCHHHHHHHHhc----------cCCEEEECchhhCC--CCCCCEeEE
Confidence 46789999999999999999974 47999999999999877653 27999999987642 236799999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-.... ....+++.++++|| ||.+++..
T Consensus 99 ~~~~~l~~~~----~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 99 ISILAIHHFS----HLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp EEESCGGGCS----SHHHHHHHHHHHBC-SSCEEEEE
T ss_pred EEcchHhhcc----CHHHHHHHHHHHhC-CcEEEEEE
Confidence 9754321111 13578999999999 99666554
No 217
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.13 E-value=6.1e-11 Score=107.81 Aligned_cols=126 Identities=10% Similarity=0.053 Sum_probs=83.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEE--EcChHHHHHhCCCCCcc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLH--IGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~--~~D~~~~l~~~~~~~fD 202 (319)
.+..+|||||||+|+.+..+++. .+|++||+++. +..+++. +...... ..++.++ ++|+.++ ++++||
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m-~~~a~~~-~~~~~~~-~~~v~~~~~~~D~~~l----~~~~fD 142 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTL-GVGGHEV-PRITESY-GWNIVKFKSRVDIHTL----PVERTD 142 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECC-CCSSCCC-CCCCCBT-TGGGEEEECSCCTTTS----CCCCCS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchh-hhhhhhh-hhhhhcc-CCCeEEEecccCHhHC----CCCCCc
Confidence 45679999999999999999887 57999999994 3222211 1000001 1268888 8998764 357899
Q ss_pred EEEEcCCCCCCCccccc---hHHHHHHHHHhcCCCc--EEEEecCCcccChHHHHHHHHHHHhhcC
Q 020933 203 AVIVDSSDPIGPAQELF---EKPFFESVAKALRPGG--VVSTQAESIWLHMHIIEDIVANCRQIFK 263 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~---~~~f~~~~~~~LkpgG--~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 263 (319)
+|++|.. .......+. ...+++.+.++||||| .|++..-.+ ....+..+++.+++.|.
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~--~~~~~~~~l~~l~~~f~ 205 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCP--YSVEVMERLSVMQRKWG 205 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCT--TSHHHHHHHHHHHHHHC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCC--CChhHHHHHHHHHHHcC
Confidence 9999876 322211100 1137888999999999 999865332 12233456677778884
No 218
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.13 E-value=1.8e-10 Score=109.12 Aligned_cols=107 Identities=15% Similarity=0.188 Sum_probs=82.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
....+|||||||+|..+..+++..+..+++++|+ +.+++.+++++... ++ .++++++.+|..+ .. ...||+|
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~l-~~~v~~~~~d~~~---~~-p~~~D~v 272 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR--GL-ADRCEILPGDFFE---TI-PDGADVY 272 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TC-TTTEEEEECCTTT---CC-CSSCSEE
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc--Cc-CCceEEeccCCCC---CC-CCCceEE
Confidence 4568999999999999999998877789999999 99999999987653 22 3589999999763 22 2389999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-+..+.. ....+++.++++|+|||.+++..
T Consensus 273 ~~~~vlh~~~d~--~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 273 LIKHVLHDWDDD--DVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EhhhhhccCCHH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 974432222111 12368999999999999998753
No 219
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.12 E-value=1.8e-10 Score=105.92 Aligned_cols=127 Identities=17% Similarity=0.110 Sum_probs=85.1
Q ss_pred EEEEcCeE-eecccchhHHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccc
Q 020933 95 VLILDGVI-QLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV 173 (319)
Q Consensus 95 ~L~ldg~~-q~~~~de~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~ 173 (319)
.+.++|.. ..-++..+...+++..+.+ ...+++|||||||+|.++..++++ +..+|++||+++.|++.+.+.
T Consensus 55 ~I~v~g~~~~yvsrg~~Kl~~~l~~~~~--~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~---- 127 (291)
T 3hp7_A 55 ELKLKGEKLRYVSRGGLKLEKALAVFNL--SVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ---- 127 (291)
T ss_dssp CEEETTCCCCSSSTTHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT----
T ss_pred EEEEcccccccccchHHHHHHHHHhcCC--CccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh----
Confidence 35555542 2334444555666665432 235679999999999999999888 457999999999999885542
Q ss_pred cCCCCCCCeEEEE-cChHHHH-HhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 174 AVGFEDPRVTLHI-GDGVAFL-KAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 174 ~~~~~~~~v~v~~-~D~~~~l-~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++++.... .|++... ...+...||+|++|..... ...++..++++|+|||.+++-
T Consensus 128 -----~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s-------l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 128 -----DDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS-------LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp -----CTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC-------GGGTHHHHHHHSCTTCEEEEE
T ss_pred -----CcccceecccCceecchhhCCCCCCCEEEEEeeHhh-------HHHHHHHHHHHcCcCCEEEEE
Confidence 23443332 3333221 1122345999999876431 246799999999999998875
No 220
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.12 E-value=1.1e-10 Score=110.26 Aligned_cols=107 Identities=23% Similarity=0.325 Sum_probs=81.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++..+..+++++|+ +.+++.+++++... ++ ..+++++.+|+.+. . ...||+|
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~---~-~~~~D~v 252 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA--GL-ADRVTVAEGDFFKP---L-PVTADVV 252 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TC-TTTEEEEECCTTSC---C-SCCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc--CC-CCceEEEeCCCCCc---C-CCCCCEE
Confidence 3567999999999999999998766779999999 99999999987643 22 24899999997653 2 2349999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-+..+.. ....+++.++++|+|||.+++..
T Consensus 253 ~~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 253 LLSFVLLNWSDE--DALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeccccCCCHH--HHHHHHHHHHHhcCCCcEEEEEe
Confidence 975432221111 12378999999999999888754
No 221
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.11 E-value=1.4e-10 Score=110.77 Aligned_cols=108 Identities=24% Similarity=0.301 Sum_probs=76.4
Q ss_pred HHHHHHHhccccCCCCCceeeEeecc------ccHHHHHHHh-cCCCceEEEEECChHHHHHHHhccccccCCCCCCCeE
Q 020933 111 AYQEMITHLPLCSIPNPKKVLVIGGG------DGGVLREVSR-HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVT 183 (319)
Q Consensus 111 ~Y~e~l~~l~l~~~~~~~~VL~IG~G------~G~~~~~l~~-~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~ 183 (319)
.|.+.+..+ ..++.+||||||| +|+.+..+++ +.+..+|++||+++.+. . ..++++
T Consensus 205 ~Ye~lL~~l----~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~-------~~~rI~ 267 (419)
T 3sso_A 205 HYDRHFRDY----RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V-------DELRIR 267 (419)
T ss_dssp HHHHHHGGG----TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G-------CBTTEE
T ss_pred HHHHHHHhh----cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h-------cCCCcE
Confidence 455555442 2467899999999 6666666554 45678999999999972 1 236899
Q ss_pred EEEcChHH--HHHhC--CCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 184 LHIGDGVA--FLKAV--PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 184 v~~~D~~~--~l~~~--~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++++|+.+ +.... .+++||+|++|..... . ....+|+.++++|||||+|++.
T Consensus 268 fv~GDa~dlpf~~~l~~~d~sFDlVisdgsH~~---~--d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 268 TIQGDQNDAEFLDRIARRYGPFDIVIDDGSHIN---A--HVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp EEECCTTCHHHHHHHHHHHCCEEEEEECSCCCH---H--HHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEecccccchhhhhhcccCCccEEEECCcccc---h--hHHHHHHHHHHhcCCCeEEEEE
Confidence 99999876 33110 1378999998754211 1 1357899999999999999986
No 222
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.10 E-value=2.2e-10 Score=106.62 Aligned_cols=104 Identities=14% Similarity=0.146 Sum_probs=81.1
Q ss_pred ceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEc
Q 020933 128 KKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVD 207 (319)
Q Consensus 128 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D 207 (319)
.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++... +. .++++++.+|..+. . .++||+|++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~---~-~~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL--LA-GERVSLVGGDMLQE---V-PSNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH--HH-TTSEEEEESCTTTC---C-CSSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc--CC-CCcEEEecCCCCCC---C-CCCCCEEEEc
Confidence 8999999999999999998766779999999 99999999987643 11 25899999997662 3 3679999975
Q ss_pred CCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 208 SSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 208 ~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
..-+..+.. ....+++.++++|+|||.+++..
T Consensus 241 ~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 241 RIIGDLDEA--ASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp SCGGGCCHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhccCCCHH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 433211111 12478999999999999988763
No 223
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.09 E-value=1.4e-09 Score=103.18 Aligned_cols=102 Identities=14% Similarity=0.109 Sum_probs=79.3
Q ss_pred CceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCC--------
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE-------- 198 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~-------- 198 (319)
+.+|||+|||+|.++..+++. ..+|++||+++.+++.|++++..+ ++ .+++++.+|+.+++.....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~n--g~--~~v~~~~~d~~~~~~~~~~~~~~~~l~ 287 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAAN--HI--DNVQIIRMAAEEFTQAMNGVREFNRLQ 287 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHT--TC--CSEEEECCCSHHHHHHHSSCCCCTTGG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHc--CC--CceEEEECCHHHHHHHHhhcccccccc
Confidence 578999999999999999875 368999999999999999998755 22 4899999999998754312
Q ss_pred ------CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCc
Q 020933 199 ------GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESI 244 (319)
Q Consensus 199 ------~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~ 244 (319)
.+||+|++|++... +.+.+.+.|+++|.++..++++
T Consensus 288 ~~~~~~~~fD~Vv~dPPr~g----------~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 288 GIDLKSYQCETIFVDPPRSG----------LDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp GSCGGGCCEEEEEECCCTTC----------CCHHHHHHHTTSSEEEEEESCH
T ss_pred ccccccCCCCEEEECcCccc----------cHHHHHHHHhCCCEEEEEECCH
Confidence 37999999876421 1234556677889888776554
No 224
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.09 E-value=3.1e-11 Score=110.18 Aligned_cols=114 Identities=12% Similarity=0.052 Sum_probs=74.6
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCC------------C--------------
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE------------D-------------- 179 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~------------~-------------- 179 (319)
.+.+|||||||+|.....+++. +..+|+++|+++.+++.|++++......++ .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 5679999999999955444443 246899999999999999986543100000 0
Q ss_pred CCeEEEEcChHHHHH----hCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 180 PRVTLHIGDGVAFLK----AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 180 ~~v~v~~~D~~~~l~----~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
..++++.+|+.+.+. ..++++||+|++...-.......-....+++.++++|||||.|++.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 025677788876321 1124679999975432111100001357899999999999999875
No 225
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.09 E-value=5.3e-10 Score=102.11 Aligned_cols=109 Identities=14% Similarity=0.088 Sum_probs=75.5
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEEC-ChHHHHHHHhcccccc---CCCC---CCCeEEEEcCh----HHHHH
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEI-DKMVVDVSKQFFPDVA---VGFE---DPRVTLHIGDG----VAFLK 194 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEi-d~~vi~~ak~~~~~~~---~~~~---~~~v~v~~~D~----~~~l~ 194 (319)
.+++|||||||+|.++..+++.. ..+|+++|+ ++.+++.++++...+. .++. .++++++..|. .....
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 56799999999999999988874 458999999 8999999999873210 0111 13788885542 22322
Q ss_pred hCCCCCccEEEE-cCCCCCCCccccchHHHHHHHHHhcC---C--CcEEEEe
Q 020933 195 AVPEGTYDAVIV-DSSDPIGPAQELFEKPFFESVAKALR---P--GGVVSTQ 240 (319)
Q Consensus 195 ~~~~~~fDvIi~-D~~~~~~~~~~l~~~~f~~~~~~~Lk---p--gG~lv~~ 240 (319)
....++||+|++ |..... . ....+++.+.++|+ | ||++++.
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~---~--~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFH---Q--AHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHSCSSBSEEEEESCCSCG---G--GHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hccCCCCCEEEEeCcccCh---H--HHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 112578999996 543321 1 14578999999999 9 9976654
No 226
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.08 E-value=4.3e-10 Score=105.92 Aligned_cols=107 Identities=19% Similarity=0.153 Sum_probs=81.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|..+..+++..+..+++++|+ +.+++.+++++... ++ ..+++++.+|+.+.. ...+|+|
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~~----~~~~D~v 260 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK--GV-ADRMRGIAVDIYKES----YPEADAV 260 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--TC-TTTEEEEECCTTTSC----CCCCSEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc--CC-CCCEEEEeCccccCC----CCCCCEE
Confidence 4568999999999999999998777779999999 99999999987653 22 247999999987641 2334999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-+..+.. ....+++.++++|+|||.+++..
T Consensus 261 ~~~~vlh~~~d~--~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 261 LFCRILYSANEQ--LSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEechhccCCHH--HHHHHHHHHHHhcCCCCEEEEEe
Confidence 975433222211 13578999999999999987643
No 227
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.08 E-value=1.8e-10 Score=108.40 Aligned_cols=107 Identities=26% Similarity=0.391 Sum_probs=81.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|.++..+++..+..+++++|+ +.+++.+++++... +. ..+++++.+|..+. . ...||+|
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~---~-~~~~D~v 253 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE--GL-SDRVDVVEGDFFEP---L-PRKADAI 253 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT--TC-TTTEEEEECCTTSC---C-SSCEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc--CC-CCceEEEeCCCCCC---C-CCCccEE
Confidence 3567999999999999999998766678999999 99999999987653 22 24899999997653 2 2359999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-+..+.. ....+++.++++|+|||.+++..
T Consensus 254 ~~~~vl~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 254 ILSFVLLNWPDH--DAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEcccccCCCHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 975432211111 12478999999999999888753
No 228
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.08 E-value=1.4e-10 Score=107.74 Aligned_cols=108 Identities=20% Similarity=0.156 Sum_probs=81.4
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.++.+|||||||+|..+..+++..+..+++++|++ .+++.+++++... ++ ..+++++.+|..+. .. .+.||+|
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~--~~-~~~v~~~~~d~~~~--~~-~~~~D~v 236 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ--GV-ASRYHTIAGSAFEV--DY-GNDYDLV 236 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH--TC-GGGEEEEESCTTTS--CC-CSCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc--CC-CcceEEEecccccC--CC-CCCCcEE
Confidence 45689999999999999999987666799999999 9999999987653 22 24799999997764 12 3459999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-+..+.. ....+++.++++|+|||.+++..
T Consensus 237 ~~~~~l~~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 237 LLPNFLHHFDVA--TCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcchhccCCHH--HHHHHHHHHHHhCCCCcEEEEEe
Confidence 974322111111 13578999999999999877653
No 229
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.08 E-value=1.4e-10 Score=107.51 Aligned_cols=124 Identities=13% Similarity=0.092 Sum_probs=82.3
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEEC----ChHHHHHHHhccccccCCCCCCCeEEEEc-ChHHHHHhCCCC
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEI----DKMVVDVSKQFFPDVAVGFEDPRVTLHIG-DGVAFLKAVPEG 199 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEi----d~~vi~~ak~~~~~~~~~~~~~~v~v~~~-D~~~~l~~~~~~ 199 (319)
++..+|||||||+|+.+..+++. .+|++||+ ++..++..+ .. ....++++++.+ |+..+ +.+
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~--~~----~~~~~~v~~~~~~D~~~l----~~~ 147 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIP--MS----TYGWNLVRLQSGVDVFFI----PPE 147 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCC--CC----STTGGGEEEECSCCTTTS----CCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHH--hh----hcCCCCeEEEeccccccC----CcC
Confidence 34579999999999999999988 47999999 443322110 11 112357999999 87654 257
Q ss_pred CccEEEEcCCCCCCCc--cccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcC
Q 020933 200 TYDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFK 263 (319)
Q Consensus 200 ~fDvIi~D~~~~~~~~--~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 263 (319)
+||+|++|.....+.. .+.....+++.+.++|||||.|++....+. ......++..++..|.
T Consensus 148 ~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~--~~~~~~~l~~l~~~f~ 211 (305)
T 2p41_A 148 RCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPY--MSSVIEKMEALQRKHG 211 (305)
T ss_dssp CCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCC--SHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCC--CchHHHHHHHHHHHcC
Confidence 8999999876432211 010011478888999999999998653221 2334566677777784
No 230
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.06 E-value=1.5e-10 Score=113.76 Aligned_cols=106 Identities=16% Similarity=0.157 Sum_probs=79.2
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
++.+|||||||+|.++..+++. +..+|++||+++ +++.|++++... ++. .+++++.+|+.++. . .++||+|+
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~--gl~-~~v~~~~~d~~~~~--~-~~~fD~Iv 229 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSN--NLT-DRIVVIPGKVEEVS--L-PEQVDIII 229 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHT--TCT-TTEEEEESCTTTCC--C-SSCEEEEE
T ss_pred CCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHc--CCC-CcEEEEECchhhCc--c-CCCeEEEE
Confidence 5679999999999999999886 457999999999 889999887654 332 58999999987641 2 46899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++.......... ..+.+..++++|||||++++..
T Consensus 230 s~~~~~~~~~e~--~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 230 SEPMGYMLFNER--MLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp CCCCHHHHTCHH--HHHHHHHGGGGEEEEEEEESCE
T ss_pred EeCchHhcCcHH--HHHHHHHHHHhcCCCCEEEEEe
Confidence 754311000011 2356778899999999998654
No 231
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.05 E-value=1.2e-10 Score=111.57 Aligned_cols=119 Identities=19% Similarity=0.277 Sum_probs=85.0
Q ss_pred CCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.+.+|||+|||+|.++..++++. +..+|+++|+|+.+++.| .+++++++|...+. ..++||+|
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------~~~~~~~~D~~~~~---~~~~fD~I 102 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------PWAEGILADFLLWE---PGEAFDLI 102 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-------------TTEEEEESCGGGCC---CSSCEEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-------------CCCcEEeCChhhcC---ccCCCCEE
Confidence 45699999999999999998763 457899999999987655 37899999987753 24689999
Q ss_pred EEcCCCCCCCc---------cc----------------cchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHH
Q 020933 205 IVDSSDPIGPA---------QE----------------LFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCR 259 (319)
Q Consensus 205 i~D~~~~~~~~---------~~----------------l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~ 259 (319)
+++++...... .. .....|++.+.++|+|||.+++.....+........+.+.+.
T Consensus 103 i~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~ 182 (421)
T 2ih2_A 103 LGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLA 182 (421)
T ss_dssp EECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHH
T ss_pred EECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHHH
Confidence 99865422111 00 011268999999999999998877555543333344444444
Q ss_pred h
Q 020933 260 Q 260 (319)
Q Consensus 260 ~ 260 (319)
+
T Consensus 183 ~ 183 (421)
T 2ih2_A 183 R 183 (421)
T ss_dssp H
T ss_pred h
Confidence 3
No 232
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.05 E-value=1.7e-10 Score=108.32 Aligned_cols=128 Identities=16% Similarity=0.138 Sum_probs=90.7
Q ss_pred CCceeeEeeccccHHHHHHHhcCCC-----ceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSV-----EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGT 200 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~-----~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~ 200 (319)
.+.+|||+|||+|+++..++++.+. .+++++|+|+.++++|+.++... + .+++++++|..... ..++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~--g---~~~~i~~~D~l~~~---~~~~ 201 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ--R---QKMTLLHQDGLANL---LVDP 201 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH--T---CCCEEEESCTTSCC---CCCC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC--C---CCceEEECCCCCcc---ccCC
Confidence 4579999999999999998876322 68999999999999999987644 2 26899999976532 2578
Q ss_pred ccEEEEcCCCCCCCc-------------c-ccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhh
Q 020933 201 YDAVIVDSSDPIGPA-------------Q-ELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQI 261 (319)
Q Consensus 201 fDvIi~D~~~~~~~~-------------~-~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 261 (319)
||+|+++++....+. . ......|++.+.+.|+|||++++.+.+.+........+.+.+.+.
T Consensus 202 fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~ 276 (344)
T 2f8l_A 202 VDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKN 276 (344)
T ss_dssp EEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHH
T ss_pred ccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhC
Confidence 999999876321110 0 011236899999999999998887644444433334444444443
No 233
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.04 E-value=1.2e-09 Score=95.25 Aligned_cols=101 Identities=14% Similarity=0.063 Sum_probs=77.7
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCC-CCCeEEEEcChHH-------------
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE-DPRVTLHIGDGVA------------- 191 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~-~~~v~v~~~D~~~------------- 191 (319)
++++|||||+ |+.+..+++.. ..+|+.||.|++..+.+++++... ++. ..+++++.+|+.+
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~--g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELP-GKHVTSVESDRAWARMMKAWLAAN--PPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHS--CCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred CCCEEEEECc--hHHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHc--CCCCCCceEEEEeCchhhhcccccccchhh
Confidence 5789999998 47888888763 589999999999999999999865 330 3589999999643
Q ss_pred -----HHH---hC-CCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 192 -----FLK---AV-PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 192 -----~l~---~~-~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+.. .. ..++||+|++|... ...++..+.+.|+|||++++.
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k---------~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRF---------RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSS---------HHHHHHHHHHHCSSCEEEEET
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCC---------chhHHHHHHHhcCCCeEEEEe
Confidence 221 12 13689999999742 236677788999999999874
No 234
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.04 E-value=6.8e-10 Score=113.84 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=81.2
Q ss_pred CCceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccC--CCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAV--GFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~--~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
.+.+|||||||+|.++..+++.. +..+|++||+++.+++.|++++..... ....++++++++|+.++.. .+++||
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~--~d~sFD 798 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDS--RLHDVD 798 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT--TSCSCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCc--ccCCee
Confidence 56899999999999999999885 457999999999999999985532100 1123589999999877532 357899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|++...-...+.. ....+++.+.++|||| .+++.+
T Consensus 799 lVV~~eVLeHL~dp--~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 799 IGTCLEVIEHMEED--QACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EEEEESCGGGSCHH--HHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EEEEeCchhhCChH--HHHHHHHHHHHHcCCC-EEEEEe
Confidence 99974322111111 1235899999999999 666654
No 235
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.03 E-value=8.7e-10 Score=104.81 Aligned_cols=103 Identities=17% Similarity=0.086 Sum_probs=78.1
Q ss_pred CCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
...+.+|||+|||+|.++.++++.....+|+++|+|+.+++.|++++... ++. .+++++++|+.+... +.++||+
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~--gl~-~~i~~~~~D~~~~~~--~~~~fD~ 289 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA--GVL-DKIKFIQGDATQLSQ--YVDSVDF 289 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--TCG-GGCEEEECCGGGGGG--TCSCEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--CCC-CceEEEECChhhCCc--ccCCcCE
Confidence 34567999999999999999998865458999999999999999998654 222 489999999988653 2578999
Q ss_pred EEEcCCCCCCCc--cc--cchHHHHHHHHHhc
Q 020933 204 VIVDSSDPIGPA--QE--LFEKPFFESVAKAL 231 (319)
Q Consensus 204 Ii~D~~~~~~~~--~~--l~~~~f~~~~~~~L 231 (319)
|++|++...... .. -...++++.++++|
T Consensus 290 Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 290 AISNLPYGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp EEEECCCC------CCHHHHHHHHHHHHHHHE
T ss_pred EEECCCCCcccCcchhHHHHHHHHHHHHHHHc
Confidence 999876432211 11 11256888899989
No 236
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.03 E-value=1.7e-09 Score=104.83 Aligned_cols=103 Identities=17% Similarity=0.120 Sum_probs=79.6
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh--CCCCCcc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA--VPEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~--~~~~~fD 202 (319)
....+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++... + -.+++++.+|+.+++.. ..+++||
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~--~--~~~v~f~~~d~~~~l~~~~~~~~~fD 358 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLN--G--LQNVTFYHENLEEDVTKQPWAKNGFD 358 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHT--T--CCSEEEEECCTTSCCSSSGGGTTCCS
T ss_pred CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHc--C--CCceEEEECCHHHHhhhhhhhcCCCC
Confidence 35579999999999999999987 478999999999999999988654 2 24899999999886432 1246899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|++|++.... .++++.+.+ ++|++++.+.+
T Consensus 359 ~Vv~dPPr~g~-------~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 359 KVLLDPARAGA-------AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp EEEECCCTTCC-------HHHHHHHHH-HCCSEEEEEES
T ss_pred EEEECCCCccH-------HHHHHHHHh-cCCCeEEEEEC
Confidence 99998654321 245666554 78999888754
No 237
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.01 E-value=4.9e-10 Score=97.93 Aligned_cols=92 Identities=12% Similarity=0.140 Sum_probs=72.7
Q ss_pred CceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEE
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~ 206 (319)
+.+|||||||+|.++..+++. +++|+++.+++.+++. +++++.+|+.+.. .++++||+|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-----------~~~~~~~d~~~~~--~~~~~fD~v~~ 108 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-----------GVFVLKGTAENLP--LKDESFDFALM 108 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-----------TCEEEECBTTBCC--SCTTCEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-----------CCEEEEcccccCC--CCCCCeeEEEE
Confidence 789999999999999988755 9999999999999875 4788899976542 23578999997
Q ss_pred cCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 207 D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
...-...+ ....+++.+.++|+|||.+++..
T Consensus 109 ~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 109 VTTICFVD----DPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp ESCGGGSS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchHhhcc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 54321111 13578999999999999998864
No 238
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.01 E-value=1.1e-09 Score=105.83 Aligned_cols=99 Identities=12% Similarity=0.185 Sum_probs=78.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
....+|||+|||+|.++..+++.. .+|++||+++.+++.|++++..+ + -. ++++.+|+.+++. .+||+|
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~--~~V~gvD~s~~ai~~A~~n~~~n--g--l~-v~~~~~d~~~~~~----~~fD~V 357 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVEIN--N--VD-AEFEVASDREVSV----KGFDTV 357 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH--T--CC-EEEEECCTTTCCC----TTCSEE
T ss_pred CCCCEEEEeeccchHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc--C--Cc-EEEEECChHHcCc----cCCCEE
Confidence 356799999999999999999873 68999999999999999988654 2 23 9999999888642 389999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++|++... ....+++.+. .|+|+|++++.+
T Consensus 358 v~dPPr~g------~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 358 IVDPPRAG------LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp EECCCTTC------SCHHHHHHHH-HHCCSEEEEEES
T ss_pred EEcCCccc------hHHHHHHHHH-hcCCCcEEEEEC
Confidence 99876321 1335676665 499999999865
No 239
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.00 E-value=3e-10 Score=102.32 Aligned_cols=114 Identities=15% Similarity=0.170 Sum_probs=84.8
Q ss_pred HHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChH
Q 020933 111 AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV 190 (319)
Q Consensus 111 ~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~ 190 (319)
.|...+..+ +.+.+|||||||.|-++..++...+..+|+++|||+.+++++++++..+ ..+.++.+.|..
T Consensus 122 fY~~i~~~i-----~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~-----g~~~~~~v~D~~ 191 (281)
T 3lcv_B 122 FYRELFRHL-----PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL-----NVPHRTNVADLL 191 (281)
T ss_dssp HHHHHGGGS-----CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT-----TCCEEEEECCTT
T ss_pred HHHHHHhcc-----CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeeec
Confidence 355555443 4588999999999999999988777899999999999999999998765 345889999944
Q ss_pred HHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 191 AFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 191 ~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
. ..+.++||+|++...-+.-.... ....| .+.+.|+++|++|-.
T Consensus 192 ~---~~p~~~~DvaL~lkti~~Le~q~--kg~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 192 E---DRLDEPADVTLLLKTLPCLETQQ--RGSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp T---SCCCSCCSEEEETTCHHHHHHHS--TTHHH-HHHHHSSCSEEEEEE
T ss_pred c---cCCCCCcchHHHHHHHHHhhhhh--hHHHH-HHHHHhCCCCEEEec
Confidence 3 23478999999754432211110 12345 788999999998853
No 240
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.99 E-value=1.5e-09 Score=102.37 Aligned_cols=104 Identities=22% Similarity=0.218 Sum_probs=80.2
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
..++|||||||+|..+..+++..|..++++.|+ |.+++.+++++... ..+|++++.+|.++. +...+|+|+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~----~~~rv~~~~gD~~~~----~~~~~D~~~ 249 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ----EEEQIDFQEGDFFKD----PLPEADLYI 249 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC------CCSEEEEESCTTTS----CCCCCSEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc----ccCceeeecCccccC----CCCCceEEE
Confidence 457999999999999999999888889999998 88999999987643 246999999996542 245689999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+-..-+..+... ...+++.++++|+|||.+++.
T Consensus 250 ~~~vlh~~~d~~--~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 250 LARVLHDWADGK--CSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp EESSGGGSCHHH--HHHHHHHHHHHCCTTCEEEEE
T ss_pred eeeecccCCHHH--HHHHHHHHHhhCCCCCEEEEE
Confidence 743322222111 246899999999999988775
No 241
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.98 E-value=2.2e-09 Score=97.74 Aligned_cols=111 Identities=16% Similarity=0.201 Sum_probs=78.2
Q ss_pred CCceeeEeeccc--cHHHHHHHh-cCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHH--hCC--C
Q 020933 126 NPKKVLVIGGGD--GGVLREVSR-HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLK--AVP--E 198 (319)
Q Consensus 126 ~~~~VL~IG~G~--G~~~~~l~~-~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~--~~~--~ 198 (319)
...+|||||||+ ++.+.++++ ..+..+|++||+||.|++.|++.+... ...+++++++|+.+.-. ..+ .
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~----~~~~~~~v~aD~~~~~~~l~~~~~~ 153 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST----PEGRTAYVEADMLDPASILDAPELR 153 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC----SSSEEEEEECCTTCHHHHHTCHHHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC----CCCcEEEEEecccChhhhhcccccc
Confidence 457999999997 445566554 456789999999999999999987643 23479999999987521 000 2
Q ss_pred CCcc-----EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 199 GTYD-----AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 199 ~~fD-----vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+.|| +|+++..-++.+... --...++.+.+.|+|||+|++..
T Consensus 154 ~~~D~~~p~av~~~avLH~l~d~~-~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVHFVLDED-DAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TTCCTTSCCEEEEESCGGGSCGGG-CHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cccCcCCcchHHhhhhHhcCCchh-hHHHHHHHHHHhCCCCcEEEEEe
Confidence 3455 466655544433211 01468999999999999999874
No 242
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.97 E-value=1.3e-09 Score=102.22 Aligned_cols=104 Identities=18% Similarity=0.145 Sum_probs=75.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+...+|||||||+|..+..+++..+..+++++|+ +.++. ++..... + ..++++++.+|+.+ .. + +||+|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~--~-~~~~v~~~~~d~~~---~~-p-~~D~v 251 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAP--D-VAGRWKVVEGDFLR---EV-P-HADVH 251 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCG--G-GTTSEEEEECCTTT---CC-C-CCSEE
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--ccccccc--C-CCCCeEEEecCCCC---CC-C-CCcEE
Confidence 4568999999999999999998777788999999 55555 4443322 1 13589999999762 23 3 89999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-+..+.. ....+++.++++|||||.+++..
T Consensus 252 ~~~~vlh~~~d~--~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 252 VLKRILHNWGDE--DSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EEehhccCCCHH--HHHHHHHHHHHhcCCCCEEEEEE
Confidence 975433222211 12478999999999999998753
No 243
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.96 E-value=8.7e-10 Score=100.62 Aligned_cols=111 Identities=14% Similarity=0.142 Sum_probs=75.2
Q ss_pred CCceeeEeeccccH----HHHHHHhcCC----CceEEEEECChHHHHHHHhcccccc-----------------CCC-C-
Q 020933 126 NPKKVLVIGGGDGG----VLREVSRHSS----VEKIDICEIDKMVVDVSKQFFPDVA-----------------VGF-E- 178 (319)
Q Consensus 126 ~~~~VL~IG~G~G~----~~~~l~~~~~----~~~v~~VEid~~vi~~ak~~~~~~~-----------------~~~-~- 178 (319)
.+.+||++|||+|. ++..+++..+ ..+|+++|||+.+++.|++...... ... +
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 5555655422 3589999999999999998641100 000 0
Q ss_pred --------CCCeEEEEcChHHHHHhCC-CCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 179 --------DPRVTLHIGDGVAFLKAVP-EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 179 --------~~~v~v~~~D~~~~l~~~~-~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
..+++|..+|..+. ..+ .++||+|+|-..-....+ -....+++.+.++|+|||+|++-
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~--~~~~~~~fDlI~crnvliyf~~--~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK--QYNVPGPFDAIFCRNVMIYFDK--TTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS--SCCCCCCEEEEEECSSGGGSCH--HHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCC--CCCcCCCeeEEEECCchHhCCH--HHHHHHHHHHHHHhCCCcEEEEE
Confidence 03799999997662 111 468999998322111111 11357899999999999999984
No 244
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.96 E-value=1.5e-09 Score=96.68 Aligned_cols=115 Identities=15% Similarity=0.103 Sum_probs=75.4
Q ss_pred cchhHHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE
Q 020933 107 RDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI 186 (319)
Q Consensus 107 ~de~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~ 186 (319)
+......+++..+.. .+.+++|||||||+|.++..+++. +..+|++||+++.+++.+++..+ ++....
T Consensus 20 rg~~kL~~~L~~~~~--~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~---------~~~~~~ 87 (232)
T 3opn_A 20 RGGLKLEKALKEFHL--EINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDE---------RVVVME 87 (232)
T ss_dssp TTHHHHHHHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCT---------TEEEEC
T ss_pred CcHHHHHHHHHHcCC--CCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCc---------cccccc
Confidence 333444556655432 235679999999999999999988 44599999999999999887543 222221
Q ss_pred cChHHHH--HhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 187 GDGVAFL--KAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 187 ~D~~~~l--~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
..-..++ .......||.+.+|..... ...+++.++++|||||.+++.
T Consensus 88 ~~~~~~~~~~~~~~~~~d~~~~D~v~~~-------l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 88 QFNFRNAVLADFEQGRPSFTSIDVSFIS-------LDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SCCGGGCCGGGCCSCCCSEEEECCSSSC-------GGGTHHHHHHHSCTTCEEEEE
T ss_pred cceEEEeCHhHcCcCCCCEEEEEEEhhh-------HHHHHHHHHHhccCCCEEEEE
Confidence 1111111 1121223677776654321 146899999999999999875
No 245
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.95 E-value=3.1e-09 Score=97.71 Aligned_cols=127 Identities=17% Similarity=0.256 Sum_probs=80.1
Q ss_pred hHHHHHHHhc--cccCCCCCceeeEeecc------ccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCC
Q 020933 110 CAYQEMITHL--PLCSIPNPKKVLVIGGG------DGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDP 180 (319)
Q Consensus 110 ~~Y~e~l~~l--~l~~~~~~~~VL~IG~G------~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~ 180 (319)
..|.++...+ .....++..+||||||| +|. ..+++. ++..+|++||+++. + +
T Consensus 45 ~~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v---------~ 105 (290)
T 2xyq_A 45 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V---------S 105 (290)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B---------C
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C---------C
Confidence 3466655443 12234456799999994 476 334443 33578999999998 1 2
Q ss_pred CeEE-EEcChHHHHHhCCCCCccEEEEcCCCCCC------Cc-cccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHH
Q 020933 181 RVTL-HIGDGVAFLKAVPEGTYDAVIVDSSDPIG------PA-QELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIE 252 (319)
Q Consensus 181 ~v~v-~~~D~~~~l~~~~~~~fDvIi~D~~~~~~------~~-~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~ 252 (319)
++++ +++|+.+.. . .++||+|++|...+.. .. ...+...+++.+.++|||||.|++..... ....
T Consensus 106 ~v~~~i~gD~~~~~--~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~----~~~~ 178 (290)
T 2xyq_A 106 DADSTLIGDCATVH--T-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH----SWNA 178 (290)
T ss_dssp SSSEEEESCGGGCC--C-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS----SCCH
T ss_pred CCEEEEECccccCC--c-cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc----CCHH
Confidence 5778 999987642 1 4689999998653321 00 01122478999999999999999854211 1123
Q ss_pred HHHHHHHhh-c
Q 020933 253 DIVANCRQI-F 262 (319)
Q Consensus 253 ~~~~~l~~~-F 262 (319)
.+.+.+++. |
T Consensus 179 ~l~~~l~~~GF 189 (290)
T 2xyq_A 179 DLYKLMGHFSW 189 (290)
T ss_dssp HHHHHHTTEEE
T ss_pred HHHHHHHHcCC
Confidence 555666665 6
No 246
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.94 E-value=1.6e-09 Score=102.66 Aligned_cols=99 Identities=17% Similarity=0.130 Sum_probs=75.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
....+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|..+. .++ . |+|
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~~---~p~-~-D~v 265 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA----------FSGVEHLGGDMFDG---VPK-G-DAI 265 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC---CCC-C-SEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh----------cCCCEEEecCCCCC---CCC-C-CEE
Confidence 3467999999999999999998777789999999 888876653 25899999997752 233 3 999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-+..+.. ....+++.++++|+|||.+++..
T Consensus 266 ~~~~vlh~~~~~--~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 266 FIKWICHDWSDE--HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp EEESCGGGBCHH--HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEechhhcCCHH--HHHHHHHHHHHHcCCCCEEEEEE
Confidence 975433222211 12468999999999999988753
No 247
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.93 E-value=4.9e-10 Score=107.56 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=73.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..++++. .+|+++|+++.+++.|++... ......+..+|+.... . ++++||+|
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~~~~~~l~-~-~~~~fD~I 175 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREKGI------RVRTDFFEKATADDVR-R-TEGPANVI 175 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTTTC------CEECSCCSHHHHHHHH-H-HHCCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHcCC------CcceeeechhhHhhcc-c-CCCCEEEE
Confidence 356799999999999999999874 489999999999999998611 1111112223333322 1 25789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-...+ ....+++.++++|||||++++..
T Consensus 176 ~~~~vl~h~~----d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 176 YAANTLCHIP----YVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EEESCGGGCT----THHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECChHHhcC----CHHHHHHHHHHHcCCCeEEEEEe
Confidence 9754321111 14579999999999999999875
No 248
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.93 E-value=6.2e-09 Score=96.57 Aligned_cols=115 Identities=15% Similarity=0.099 Sum_probs=83.9
Q ss_pred CCCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCC-CCCcc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVP-EGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~-~~~fD 202 (319)
..+.+|||+|||+|+.+..+++. .+..+|+++|+++..++.+++++... + -.+++++++|+.++....+ ..+||
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~--g--~~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARA--G--VSCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT--T--CCSEEEEECCGGGSCTTCGGGTTEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--C--CCeEEEEeCChHhcCccccccCCCC
Confidence 35679999999999999999875 34578999999999999999998765 2 2479999999887643211 15799
Q ss_pred EEEEcCCCC-CCC-----c---------ccc-----chHHHHHHHHHhcCCCcEEEEecCCc
Q 020933 203 AVIVDSSDP-IGP-----A---------QEL-----FEKPFFESVAKALRPGGVVSTQAESI 244 (319)
Q Consensus 203 vIi~D~~~~-~~~-----~---------~~l-----~~~~f~~~~~~~LkpgG~lv~~~~~~ 244 (319)
.|++|++.. .+. . ..+ ...++++.+.+.|+ ||+|+..+++.
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 999997642 111 0 010 12356777777787 99999887664
No 249
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.91 E-value=4.6e-09 Score=96.15 Aligned_cols=78 Identities=17% Similarity=0.272 Sum_probs=62.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++.. .+|++||+|+.+++.+++++... +. .++++++++|+.++- ...||+|
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~--~~-~~~v~~~~~D~~~~~----~~~fD~v 97 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGT--PV-ASKLQVLVGDVLKTD----LPFFDTC 97 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTS--TT-GGGEEEEESCTTTSC----CCCCSEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhc--CC-CCceEEEEcceeccc----chhhcEE
Confidence 356799999999999999999874 58999999999999999987543 11 258999999987651 3479999
Q ss_pred EEcCCCC
Q 020933 205 IVDSSDP 211 (319)
Q Consensus 205 i~D~~~~ 211 (319)
+++.+..
T Consensus 98 v~nlpy~ 104 (285)
T 1zq9_A 98 VANLPYQ 104 (285)
T ss_dssp EEECCGG
T ss_pred EEecCcc
Confidence 9876543
No 250
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.91 E-value=2.5e-09 Score=101.26 Aligned_cols=99 Identities=22% Similarity=0.219 Sum_probs=75.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
....+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|+.+. .+.+ |+|
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~D~~~~---~p~~--D~v 263 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ----------FPGVTHVGGDMFKE---VPSG--DTI 263 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC----------CTTEEEEECCTTTC---CCCC--SEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh----------cCCeEEEeCCcCCC---CCCC--CEE
Confidence 3567999999999999999998777789999999 888876653 25899999997762 2333 999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-+..+... ...+++.++++|||||.+++..
T Consensus 264 ~~~~vlh~~~d~~--~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 264 LMKWILHDWSDQH--CATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp EEESCGGGSCHHH--HHHHHHHHHHHSCTTCEEEEEE
T ss_pred EehHHhccCCHHH--HHHHHHHHHHHcCCCCEEEEEE
Confidence 9754332222111 2468999999999999988753
No 251
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.91 E-value=1.5e-09 Score=102.79 Aligned_cols=98 Identities=21% Similarity=0.198 Sum_probs=75.1
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+.+.+|||||||+|..+..+++..+..+++++|+ +.+++.+++. ++++++.+|+.+. . +. ||+|
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~-~~-~D~v 271 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL----------SGIEHVGGDMFAS---V-PQ-GDAM 271 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC----------TTEEEEECCTTTC---C-CC-EEEE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc----------CCCEEEeCCcccC---C-CC-CCEE
Confidence 4568999999999999999998777778999999 9998876541 4699999997652 2 23 9999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++...-+..+.. ....+++.++++|+|||.+++.
T Consensus 272 ~~~~~lh~~~d~--~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 272 ILKAVCHNWSDE--KCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEESSGGGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEecccccCCHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 975433222211 1237899999999999998876
No 252
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.91 E-value=2.3e-09 Score=100.68 Aligned_cols=99 Identities=16% Similarity=0.116 Sum_probs=75.3
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+...+|||||||+|..+..+++..+..+++++|+ +.+++.+++. ++++++.+|+.+. . + .||+|
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----------~~v~~~~~d~~~~---~-p-~~D~v 250 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----------NNLTYVGGDMFTS---I-P-NADAV 250 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----------TTEEEEECCTTTC---C-C-CCSEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----------CCcEEEeccccCC---C-C-CccEE
Confidence 3567999999999999999998766779999999 9998877652 3599999997652 2 2 39999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCC---CcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRP---GGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~Lkp---gG~lv~~~ 241 (319)
++...-+..+.. ....+++.++++||| ||.+++..
T Consensus 251 ~~~~~lh~~~d~--~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 251 LLKYILHNWTDK--DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp EEESCGGGSCHH--HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred EeehhhccCCHH--HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 974433222111 123789999999999 99988753
No 253
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.88 E-value=4.3e-09 Score=105.41 Aligned_cols=76 Identities=18% Similarity=0.260 Sum_probs=64.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++.+ .+|++||+++.+|++|+.+.... ...++++.++|+.+......+++||+|
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~g--a~V~giD~~~~~i~~a~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKG--ATIVGIDFQQENINVCRALAEEN----PDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTS----TTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCCCcHHHHHHHhCC--CEEEEECCCHHHHHHHHHHHHhc----CCCceEEEECCHHHHhhhccCCCccEE
Confidence 356799999999999999999984 68999999999999999987653 224799999999998765546799999
Q ss_pred EE
Q 020933 205 IV 206 (319)
Q Consensus 205 i~ 206 (319)
++
T Consensus 139 ~~ 140 (569)
T 4azs_A 139 IG 140 (569)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 254
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.87 E-value=5.8e-09 Score=99.60 Aligned_cols=111 Identities=14% Similarity=0.078 Sum_probs=81.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCC--------------------------------------CceEEEEECChHHHHHH
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSS--------------------------------------VEKIDICEIDKMVVDVS 166 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~a 166 (319)
.....|||.+||+|+++.+++.... ..+|+++|+|+.+++.|
T Consensus 193 ~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~A 272 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIA 272 (384)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHH
Confidence 3457899999999999998875321 14699999999999999
Q ss_pred HhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCC--CcEEEEec
Q 020933 167 KQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRP--GGVVSTQA 241 (319)
Q Consensus 167 k~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~Lkp--gG~lv~~~ 241 (319)
+++.... ++. .+++++++|+.++.. ..+||+|++|++........-...++|+.+.+.||+ ||.+.+-+
T Consensus 273 r~Na~~~--gl~-~~I~~~~~D~~~l~~---~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 343 (384)
T 3ldg_A 273 RKNAREV--GLE-DVVKLKQMRLQDFKT---NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILT 343 (384)
T ss_dssp HHHHHHT--TCT-TTEEEEECCGGGCCC---CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEE
T ss_pred HHHHHHc--CCC-CceEEEECChHHCCc---cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEE
Confidence 9998755 333 379999999887642 468999999987644322111234678878777776 88776644
No 255
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.85 E-value=4.8e-09 Score=90.98 Aligned_cols=86 Identities=16% Similarity=0.268 Sum_probs=65.3
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..++ .+|+++|+++. +++++.+|+.+.. .++++||+|
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~-------------------~~~~~~~d~~~~~--~~~~~fD~v 119 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL-------------------DPRVTVCDMAQVP--LEDESVDVA 119 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------STTEEESCTTSCS--CCTTCEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------CceEEEeccccCC--CCCCCEeEE
Confidence 356799999999999988873 57999999987 2456777876531 235789999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++...-+. .....+++.+.++|+|||.+++..
T Consensus 120 ~~~~~l~~-----~~~~~~l~~~~~~L~~gG~l~i~~ 151 (215)
T 2zfu_A 120 VFCLSLMG-----TNIRDFLEEANRVLKPGGLLKVAE 151 (215)
T ss_dssp EEESCCCS-----SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEehhccc-----cCHHHHHHHHHHhCCCCeEEEEEE
Confidence 97544331 124678999999999999998864
No 256
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.85 E-value=3.8e-09 Score=101.20 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=79.3
Q ss_pred CCCceeeEeeccccHHHHHHHhcCC--------------------------------------CceEEEEECChHHHHHH
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSS--------------------------------------VEKIDICEIDKMVVDVS 166 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~a 166 (319)
.....|||++||+|+++.+++.... ..+|+++|+|+.+++.|
T Consensus 200 ~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~A 279 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIA 279 (393)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHH
T ss_pred CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHH
Confidence 3457899999999999988876421 14699999999999999
Q ss_pred HhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCC--CcEEEEec
Q 020933 167 KQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRP--GGVVSTQA 241 (319)
Q Consensus 167 k~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~Lkp--gG~lv~~~ 241 (319)
++++... ++. .+++++++|+.++.. ..+||+|++|++........-...++|+.+.+.||+ ||.+.+-+
T Consensus 280 r~Na~~~--gl~-~~I~~~~~D~~~~~~---~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 350 (393)
T 3k0b_A 280 KQNAVEA--GLG-DLITFRQLQVADFQT---EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLT 350 (393)
T ss_dssp HHHHHHT--TCT-TCSEEEECCGGGCCC---CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred HHHHHHc--CCC-CceEEEECChHhCCC---CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9998754 333 379999999887642 468999999876543221111123567777666665 77766644
No 257
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.85 E-value=3.1e-09 Score=101.48 Aligned_cols=110 Identities=16% Similarity=0.188 Sum_probs=79.4
Q ss_pred CCceeeEeeccccHHHHHHHhcCC--------------------------------------CceEEEEECChHHHHHHH
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSS--------------------------------------VEKIDICEIDKMVVDVSK 167 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~--------------------------------------~~~v~~VEid~~vi~~ak 167 (319)
...+|||+|||+|+++.+++.... ..+|+++|+|+.+++.|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 457899999999999999876421 147999999999999999
Q ss_pred hccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCC--CcEEEEec
Q 020933 168 QFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRP--GGVVSTQA 241 (319)
Q Consensus 168 ~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~Lkp--gG~lv~~~ 241 (319)
+++... +.. .++++.++|+.++.. .++||+||+|++........-...++|+.+.+.|++ ||.+.+-+
T Consensus 275 ~Na~~~--gl~-~~i~~~~~D~~~l~~---~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 275 ENAEIA--GVD-EYIEFNVGDATQFKS---EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHH--TCG-GGEEEEECCGGGCCC---SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHHHc--CCC-CceEEEECChhhcCc---CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 998655 322 379999999887642 468999999887543221111124577777777766 77666544
No 258
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.82 E-value=5.8e-09 Score=101.33 Aligned_cols=112 Identities=16% Similarity=0.164 Sum_probs=81.1
Q ss_pred CCceeeEeeccccHHHHHHHhcC-------------CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS-------------SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF 192 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~-------------~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~ 192 (319)
...+|||+|||+|+++..++++. ...+++++|+|+.++++|+.++... +....+.+++++|....
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~--g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLH--GIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHT--TCCSSCCSEEECCTTTS
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHh--CCCcCCCCEeeCCCCCC
Confidence 35699999999999998887642 2357999999999999999886543 22222678999997654
Q ss_pred HHhCCCCCccEEEEcCCCCCCCcc--c-----------cchHHHHHHHHHhcCCCcEEEEecC
Q 020933 193 LKAVPEGTYDAVIVDSSDPIGPAQ--E-----------LFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 193 l~~~~~~~fDvIi~D~~~~~~~~~--~-----------l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
. ...+||+|+++++....... . -....|++.+.+.|+|||.+++...
T Consensus 249 ~---~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 249 E---PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp C---CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c---ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 2 13589999998764321110 0 0124799999999999999887653
No 259
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.82 E-value=5.1e-09 Score=96.57 Aligned_cols=76 Identities=18% Similarity=0.222 Sum_probs=58.9
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++.. .+|++||+|+.+++.+++++... + .++++++.+|+.++. ..+||+|
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~~--~~v~~vDi~~~~~~~a~~~~~~~--~--~~~v~~~~~D~~~~~----~~~~D~V 110 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPLA--KKVITIDIDSRMISEVKKRCLYE--G--YNNLEVYEGDAIKTV----FPKFDVC 110 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTTS--SEEEEECSCHHHHHHHHHHHHHT--T--CCCEEC----CCSSC----CCCCSEE
T ss_pred CCcCEEEEEcCcCcHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHc--C--CCceEEEECchhhCC----cccCCEE
Confidence 356799999999999999999873 68999999999999999987543 1 258999999987652 3589999
Q ss_pred EEcCCC
Q 020933 205 IVDSSD 210 (319)
Q Consensus 205 i~D~~~ 210 (319)
++|.+.
T Consensus 111 v~n~py 116 (299)
T 2h1r_A 111 TANIPY 116 (299)
T ss_dssp EEECCG
T ss_pred EEcCCc
Confidence 988754
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.82 E-value=1.1e-08 Score=94.18 Aligned_cols=76 Identities=20% Similarity=0.271 Sum_probs=62.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
....+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++++|+.++-. ++..||+|
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~~--~~V~aVEid~~li~~a~~~~~~------~~~v~vi~gD~l~~~~--~~~~fD~I 118 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKNA--KKVYVIEIDKSLEPYANKLKEL------YNNIEIIWGDALKVDL--NKLDFNKV 118 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCGGGHHHHHHHHHH------CSSEEEEESCTTTSCG--GGSCCSEE
T ss_pred CCcCEEEEECCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHhcc------CCCeEEEECchhhCCc--ccCCccEE
Confidence 356799999999999999999883 6899999999999999998763 2589999999887532 23579999
Q ss_pred EEcCCC
Q 020933 205 IVDSSD 210 (319)
Q Consensus 205 i~D~~~ 210 (319)
+.+.+.
T Consensus 119 v~NlPy 124 (295)
T 3gru_A 119 VANLPY 124 (295)
T ss_dssp EEECCG
T ss_pred EEeCcc
Confidence 987654
No 261
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.81 E-value=5.6e-09 Score=93.11 Aligned_cols=102 Identities=17% Similarity=0.171 Sum_probs=75.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
+.+.+|||||||.|-++..+. +..+++++|||+.+++++++++... ..++++.+.|...-. +.++||+|
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~-----g~~~~~~v~D~~~~~---~~~~~Dvv 172 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK-----DWDFTFALQDVLCAP---PAEAGDLA 172 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT-----TCEEEEEECCTTTSC---CCCBCSEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc-----CCCceEEEeecccCC---CCCCcchH
Confidence 568899999999999998877 5689999999999999999997654 368899999965432 36799999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
++...-+.- ++......+ .+.+.|+++|++|..
T Consensus 173 Lllk~lh~L--E~q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 173 LIFKLLPLL--EREQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp EEESCHHHH--HHHSTTHHH-HHHHHCBCSEEEEEE
T ss_pred HHHHHHHHh--hhhchhhHH-HHHHHhcCCCEEEEc
Confidence 864332211 001112334 677799999988743
No 262
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.81 E-value=2.5e-08 Score=90.76 Aligned_cols=98 Identities=14% Similarity=0.087 Sum_probs=71.2
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
.. +|||||||+|.++..+++.. .+|++||+|+.+++.+++++. ..+++++++|+.++-... ...+|.|+
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~-------~~~v~vi~~D~l~~~~~~-~~~~~~iv 115 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS-------GLPVRLVFQDALLYPWEE-VPQGSLLV 115 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT-------TSSEEEEESCGGGSCGGG-SCTTEEEE
T ss_pred CC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC-------CCCEEEEECChhhCChhh-ccCccEEE
Confidence 45 99999999999999999884 689999999999999999875 248999999998763211 13689999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
.+.+..+. +.-+++.+....-..+++++|
T Consensus 116 ~NlPy~is------s~il~~ll~~~~~~~~~lm~Q 144 (271)
T 3fut_A 116 ANLPYHIA------TPLVTRLLKTGRFARLVFLVQ 144 (271)
T ss_dssp EEECSSCC------HHHHHHHHHHCCEEEEEEEEE
T ss_pred ecCccccc------HHHHHHHhcCCCCCEEEEEee
Confidence 88765443 222333332312235666666
No 263
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.79 E-value=2.5e-08 Score=92.11 Aligned_cols=90 Identities=21% Similarity=0.245 Sum_probs=70.0
Q ss_pred HHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH
Q 020933 112 YQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA 191 (319)
Q Consensus 112 Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~ 191 (319)
+.+++..+. ...+.+|||+|||+|+.+..+++..+..+|+++|+|+.+++.|++++... . .+++++++|+.+
T Consensus 15 l~e~l~~L~---~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~----g-~~v~~v~~d~~~ 86 (301)
T 1m6y_A 15 VREVIEFLK---PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF----S-DRVSLFKVSYRE 86 (301)
T ss_dssp HHHHHHHHC---CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG----T-TTEEEEECCGGG
T ss_pred HHHHHHhcC---CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc----C-CcEEEEECCHHH
Confidence 455555432 23567999999999999999998765679999999999999999998764 2 589999999876
Q ss_pred HH---HhCCCCCccEEEEcCC
Q 020933 192 FL---KAVPEGTYDAVIVDSS 209 (319)
Q Consensus 192 ~l---~~~~~~~fDvIi~D~~ 209 (319)
+. ......+||.|++|+.
T Consensus 87 l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 87 ADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp HHHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHhcCCCCCCEEEEcCc
Confidence 53 2221258999999863
No 264
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.77 E-value=1.1e-08 Score=98.24 Aligned_cols=81 Identities=17% Similarity=0.115 Sum_probs=66.0
Q ss_pred CceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEE
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~ 206 (319)
+.+|||+|||+|..+..+++.. .+|++||+|+.+++.+++++.....+. .+++++++|+.+++...+.++||+|++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIPLLLNEG--KDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEEECcHHHhhhhccCCCceEEEE
Confidence 6899999999999999998874 689999999999999999986431122 479999999998765321358999999
Q ss_pred cCCCC
Q 020933 207 DSSDP 211 (319)
Q Consensus 207 D~~~~ 211 (319)
|++..
T Consensus 170 DPPrr 174 (410)
T 3ll7_A 170 DPARR 174 (410)
T ss_dssp CCEEC
T ss_pred CCCCc
Confidence 98643
No 265
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.74 E-value=1.3e-08 Score=95.83 Aligned_cols=97 Identities=18% Similarity=0.185 Sum_probs=73.7
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
...+|||||||+|..+..+++..+..+++++|+ +.+++.+++ .++++++.+|..+ .. ..||+|+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------~~~v~~~~~d~~~---~~--~~~D~v~ 256 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----------NENLNFVGGDMFK---SI--PSADAVL 256 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC----------CSSEEEEECCTTT---CC--CCCSEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc----------CCCcEEEeCccCC---CC--CCceEEE
Confidence 457999999999999999998777778999999 788876554 1369999999765 22 2599999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCC---CcEEEEe
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRP---GGVVSTQ 240 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~Lkp---gG~lv~~ 240 (319)
+...-+..+.. ....+++.++++|+| ||.+++.
T Consensus 257 ~~~vlh~~~d~--~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 257 LKWVLHDWNDE--QSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp EESCGGGSCHH--HHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred EcccccCCCHH--HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 75433222211 123789999999999 9988875
No 266
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.73 E-value=6.7e-09 Score=93.88 Aligned_cols=81 Identities=17% Similarity=0.123 Sum_probs=64.5
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECCh-------HHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDK-------MVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE 198 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~-------~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~ 198 (319)
.+.+|||+|||+|..+..+++.. .+|+++|+++ .+++.++++.... +. ..+++++++|+.+++...++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~--~~-~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLG--LTVTAFEQHPAVACLLSDGIRRALLNPETQ--DT-AARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTT--CCEEEEECCHHHHHHHHHHHHHHHHSHHHH--HH-HTTEEEEESCHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhC--CEEEEEECChhhhHHHHHHHHHHHhHHHhh--CC-ccCeEEEECCHHHHHHhhhc
Confidence 45799999999999999999873 5899999999 9999998876543 11 13699999999998754323
Q ss_pred --CCccEEEEcCCCC
Q 020933 199 --GTYDAVIVDSSDP 211 (319)
Q Consensus 199 --~~fDvIi~D~~~~ 211 (319)
++||+|++|+..+
T Consensus 158 ~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHCCCSEEEECCCC-
T ss_pred cCCCccEEEECCCCC
Confidence 6899999997653
No 267
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.72 E-value=5.2e-08 Score=87.09 Aligned_cols=76 Identities=16% Similarity=0.235 Sum_probs=59.6
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++++|+.++.... ...| .|
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~------~~~v~~~~~D~~~~~~~~-~~~~-~v 98 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD------HDNFQVLNKDILQFKFPK-NQSY-KI 98 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT------CCSEEEECCCGGGCCCCS-SCCC-EE
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc------CCCeEEEEChHHhCCccc-CCCe-EE
Confidence 356799999999999999999885 6899999999999999998753 258999999987753210 2345 56
Q ss_pred EEcCCC
Q 020933 205 IVDSSD 210 (319)
Q Consensus 205 i~D~~~ 210 (319)
+++++.
T Consensus 99 v~nlPy 104 (244)
T 1qam_A 99 FGNIPY 104 (244)
T ss_dssp EEECCG
T ss_pred EEeCCc
Confidence 666543
No 268
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.71 E-value=4e-08 Score=88.61 Aligned_cols=77 Identities=17% Similarity=0.320 Sum_probs=61.4
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHH-HhC-CCCCcc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL-KAV-PEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l-~~~-~~~~fD 202 (319)
....+|||||||+|.++..+++.. .+|++||+|+.+++.+++++.. .++++++++|+.++- ... .++.||
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~------~~~v~~i~~D~~~~~~~~~~~~~~~~ 99 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ------QKNITIYQNDALQFDFSSVKTDKPLR 99 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT------CTTEEEEESCTTTCCGGGSCCSSCEE
T ss_pred CCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh------CCCcEEEEcchHhCCHHHhccCCCeE
Confidence 356799999999999999999874 6899999999999999998753 358999999998762 222 135688
Q ss_pred EEEEcCCC
Q 020933 203 AVIVDSSD 210 (319)
Q Consensus 203 vIi~D~~~ 210 (319)
|+.+++.
T Consensus 100 -vv~NlPY 106 (255)
T 3tqs_A 100 -VVGNLPY 106 (255)
T ss_dssp -EEEECCH
T ss_pred -EEecCCc
Confidence 7766543
No 269
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.69 E-value=2.3e-08 Score=91.49 Aligned_cols=109 Identities=14% Similarity=0.052 Sum_probs=84.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcC-----CCceEEEEECChH--------------------------HHHHHHhccccc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHS-----SVEKIDICEIDKM--------------------------VVDVSKQFFPDV 173 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~-----~~~~v~~VEid~~--------------------------vi~~ak~~~~~~ 173 (319)
..|++|||+|+..|..+..+++.. +..+|+++|..+. .++.++++|...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 457899999999999988876531 3578999996421 366778888765
Q ss_pred cCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 174 AVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 174 ~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++..++++++.||+.+.+...+.++||+|++|... + ..+..+|+.+...|+|||++++.-
T Consensus 185 --gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y----~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 185 --DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--Y----ESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp --TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--H----HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred --CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--c----ccHHHHHHHHHhhcCCCEEEEEcC
Confidence 44346999999999998876655789999999742 1 114578999999999999999864
No 270
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.66 E-value=2e-08 Score=90.75 Aligned_cols=82 Identities=13% Similarity=0.096 Sum_probs=64.1
Q ss_pred ceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccC--CCCC---CCeEEEEcChHHHHHhCCCCCcc
Q 020933 128 KKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV--GFED---PRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 128 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~--~~~~---~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
.+|||+|||+|..+..+++.. .+|++||+++.+.+++++.+..... .... .+++++++|+.+++... .++||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~-~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVG--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDI-TPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHT--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTC-SSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhC-cccCC
Confidence 799999999999999999884 4799999999987777776542210 0111 47999999999998765 35799
Q ss_pred EEEEcCCCCC
Q 020933 203 AVIVDSSDPI 212 (319)
Q Consensus 203 vIi~D~~~~~ 212 (319)
+|++|+..+.
T Consensus 167 vV~lDP~y~~ 176 (258)
T 2oyr_A 167 VVYLDPMFPH 176 (258)
T ss_dssp EEEECCCCCC
T ss_pred EEEEcCCCCC
Confidence 9999986654
No 271
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.66 E-value=1.4e-09 Score=97.09 Aligned_cols=116 Identities=16% Similarity=0.245 Sum_probs=78.3
Q ss_pred HHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH
Q 020933 112 YQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA 191 (319)
Q Consensus 112 Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~ 191 (319)
+..++..+. .....+|||||||+|.++..+++.. .+|+++|+|+.+++.+++++.. .++++++++|+.+
T Consensus 18 ~~~i~~~~~---~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~------~~~v~~~~~D~~~ 86 (245)
T 1yub_A 18 LNQIIKQLN---LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL------NTRVTLIHQDILQ 86 (245)
T ss_dssp HHHHHHHCC---CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT------CSEEEECCSCCTT
T ss_pred HHHHHHhcC---CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc------CCceEEEECChhh
Confidence 344544432 2356799999999999999999884 7899999999999998887642 3589999999887
Q ss_pred HHHhCCCCCccEEEEcCCCCCCCcc-------ccchHHHH----HHHHHhcCCCcEEEEe
Q 020933 192 FLKAVPEGTYDAVIVDSSDPIGPAQ-------ELFEKPFF----ESVAKALRPGGVVSTQ 240 (319)
Q Consensus 192 ~l~~~~~~~fDvIi~D~~~~~~~~~-------~l~~~~f~----~~~~~~LkpgG~lv~~ 240 (319)
+... .+++| .|+++++....... ......++ +.+.++|+|||.+++.
T Consensus 87 ~~~~-~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 87 FQFP-NKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp TTCC-CSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHH
T ss_pred cCcc-cCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhh
Confidence 5311 12578 77777654322100 00011223 5677888888876653
No 272
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.66 E-value=1.6e-07 Score=93.30 Aligned_cols=117 Identities=13% Similarity=0.045 Sum_probs=84.5
Q ss_pred CCceeeEeeccccHHHHHHHhc---CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH--HHhCCCCC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH---SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF--LKAVPEGT 200 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~---~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~--l~~~~~~~ 200 (319)
...+|||.+||+|+++..++++ ....++.++|+++.++++|+.++... +....++++.++|.... .. ....+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~--gi~~~~~~I~~gDtL~~d~p~-~~~~~ 297 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH--GVPIENQFLHNADTLDEDWPT-QEPTN 297 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCTTTSCSCC-SSCCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc--CCCcCccceEecceecccccc-ccccc
Confidence 4569999999999999888765 23568999999999999999886543 33335789999997654 11 12578
Q ss_pred ccEEEEcCCCCCCC--cc-----------------ccchHHHHHHHHHhcC-CCcEEEEecCCcc
Q 020933 201 YDAVIVDSSDPIGP--AQ-----------------ELFEKPFFESVAKALR-PGGVVSTQAESIW 245 (319)
Q Consensus 201 fDvIi~D~~~~~~~--~~-----------------~l~~~~f~~~~~~~Lk-pgG~lv~~~~~~~ 245 (319)
||+|+++++..... .. .-....|++.+.+.|+ |||++++-..+.+
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~ 362 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGV 362 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHH
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchH
Confidence 99999987653211 00 0012358999999999 9999877654433
No 273
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.65 E-value=1.6e-07 Score=88.76 Aligned_cols=136 Identities=14% Similarity=0.182 Sum_probs=99.4
Q ss_pred CCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCC--CCCCCeEEEEcChHHHHHhCCCCCc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVG--FEDPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~--~~~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
...+.+|||+++|.|+=+..++.......|+++|+++.-++..++++...... ....++.+...|+..+.... .++|
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~-~~~f 224 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE-GDTY 224 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS-TTCE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc-cccC
Confidence 34567999999999999999988766678999999999998888877544110 12257999999999886554 6789
Q ss_pred cEEEEcCCCCC---C---Cccc--------------cchHHHHHHHHHhcCCCcEEEEecCCccc--ChHHHHHHHHHHH
Q 020933 202 DAVIVDSSDPI---G---PAQE--------------LFEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVANCR 259 (319)
Q Consensus 202 DvIi~D~~~~~---~---~~~~--------------l~~~~f~~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~~~~~l~ 259 (319)
|.|++|++... + .... -...++++.+.+.|||||+||..+++... +...+..+++...
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~~ 304 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLA 304 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHHH
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhCC
Confidence 99999988532 1 0000 12346788889999999999998877543 3455666666544
Q ss_pred h
Q 020933 260 Q 260 (319)
Q Consensus 260 ~ 260 (319)
.
T Consensus 305 ~ 305 (359)
T 4fzv_A 305 N 305 (359)
T ss_dssp H
T ss_pred C
Confidence 3
No 274
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.65 E-value=6.7e-08 Score=96.20 Aligned_cols=114 Identities=13% Similarity=0.052 Sum_probs=81.2
Q ss_pred CCceeeEeeccccHHHHHHHhcC---C---------------CceEEEEECChHHHHHHHhccccccCCCCC---CCeEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS---S---------------VEKIDICEIDKMVVDVSKQFFPDVAVGFED---PRVTL 184 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~---~---------------~~~v~~VEid~~vi~~ak~~~~~~~~~~~~---~~v~v 184 (319)
...+|||.|||+|+++..++++. . ..+++++|+|+.++++|+.++... +... .+.++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~--gi~~~~~~~~~I 246 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLH--DIEGNLDHGGAI 246 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTT--TCCCBGGGTBSE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHh--CCCccccccCCe
Confidence 35699999999999998876541 0 137999999999999999876543 2221 13789
Q ss_pred EEcChHHHHHhCCCCCccEEEEcCCCCCCCcc----------ccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 185 HIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQ----------ELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 185 ~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~----------~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+++|........ ..+||+|+++++....... .-....|++.+.+.|+|||.+++.+.
T Consensus 247 ~~gDtL~~~~~~-~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 247 RLGNTLGSDGEN-LPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp EESCTTSHHHHT-SCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EeCCCccccccc-ccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 999987654322 4689999998764322110 11124799999999999999887654
No 275
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.65 E-value=2.4e-08 Score=83.93 Aligned_cols=91 Identities=18% Similarity=0.212 Sum_probs=68.0
Q ss_pred CCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCCcc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYD 202 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~fD 202 (319)
...+.+||+||||. +.+|+++.+++.|++.+. .+++++++|+.+.... .++++||
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~--------~~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG--------NEGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT--------TTSEEEEEEGGGGGGGCCCSSCEE
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc--------cCcEEEEechhcCccccCCCCCEe
Confidence 34678999999985 138999999999998864 2489999998876431 1367899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|++...-+... .. ...++++++++|||||.+++..
T Consensus 66 ~V~~~~~l~~~~-~~--~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 66 IILSGLVPGSTT-LH--SAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp EEEECCSTTCCC-CC--CHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECChhhhcc-cC--HHHHHHHHHHHCCCCEEEEEEc
Confidence 999754333220 11 3679999999999999999853
No 276
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.62 E-value=2.4e-08 Score=99.37 Aligned_cols=115 Identities=13% Similarity=0.083 Sum_probs=79.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCC---------------CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcCh
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSS---------------VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG 189 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~---------------~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~ 189 (319)
+.+.+|||.+||+|+++..++++.. ..++.++|+|+.++++|+.++... +.+ .++.+.++|.
T Consensus 243 p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~--gi~-~~i~i~~gDt 319 (544)
T 3khk_A 243 PYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR--GID-FNFGKKNADS 319 (544)
T ss_dssp CCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT--TCC-CBCCSSSCCT
T ss_pred cCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh--CCC-cccceeccch
Confidence 3445999999999999888754311 357999999999999999886543 222 2455578886
Q ss_pred HHHHHhCCCCCccEEEEcCCCCCC-------------------------CccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 190 VAFLKAVPEGTYDAVIVDSSDPIG-------------------------PAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 190 ~~~l~~~~~~~fDvIi~D~~~~~~-------------------------~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
..... ....+||+||++++.... ++..-....|++.+.+.|+|||.+++-+.+
T Consensus 320 L~~~~-~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 320 FLDDQ-HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp TTSCS-CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred hcCcc-cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 54321 124789999998875321 001111236999999999999998776543
No 277
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.61 E-value=1.9e-07 Score=83.90 Aligned_cols=98 Identities=20% Similarity=0.311 Sum_probs=69.1
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHH-HhCCCCCccEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL-KAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l-~~~~~~~fDvI 204 (319)
.+.+|||||||+|.++..+++. +..+|++||+|+.+++.++++ . ..+++++++|+.++- ... .+.| .|
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~-------~~~v~~i~~D~~~~~~~~~-~~~~-~v 99 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G-------DERLEVINEDASKFPFCSL-GKEL-KV 99 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C-------CTTEEEECSCTTTCCGGGS-CSSE-EE
T ss_pred CcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c-------CCCeEEEEcchhhCChhHc-cCCc-EE
Confidence 5679999999999999999988 357899999999999999987 3 248999999988752 221 1234 77
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHh--cCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKA--LRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~--LkpgG~lv~~~ 241 (319)
+.+.+... +..++..+.+. .-+.+++++|-
T Consensus 100 v~NlPy~i-------~~~il~~ll~~~~~~~~~~~m~Qk 131 (249)
T 3ftd_A 100 VGNLPYNV-------ASLIIENTVYNKDCVPLAVFMVQK 131 (249)
T ss_dssp EEECCTTT-------HHHHHHHHHHTGGGCSEEEEEEEH
T ss_pred EEECchhc-------cHHHHHHHHhcCCCCceEEEEEeH
Confidence 77765433 22333333332 34556777763
No 278
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.59 E-value=8.5e-07 Score=81.70 Aligned_cols=144 Identities=18% Similarity=0.157 Sum_probs=88.9
Q ss_pred CceeeEeeccccHHHHHHH----hcCCCceE--EEEECChH---------HHHHHH---hccccccCCCCCCCeEEEEcC
Q 020933 127 PKKVLVIGGGDGGVLREVS----RHSSVEKI--DICEIDKM---------VVDVSK---QFFPDVAVGFEDPRVTLHIGD 188 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~----~~~~~~~v--~~VEid~~---------vi~~ak---~~~~~~~~~~~~~~v~v~~~D 188 (319)
.-+|||+|.|+|.+..... +..+..++ +.+|.++- ..++.+ ...+... ...-.+++..+|
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~--~~~v~L~l~~GD 174 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYE--GERLSLKVLLGD 174 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEE--CSSEEEEEEESC
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcccc--CCcEEEEEEech
Confidence 4589999999998754332 23344444 55554321 111121 1122110 012245788999
Q ss_pred hHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHh-hcCCcee
Q 020933 189 GVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQ-IFKGSVN 267 (319)
Q Consensus 189 ~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~-~F~~~v~ 267 (319)
+.+.+.+....+||+|+.|.+.|... +.|++.++|+.++++++|||++++-+ ....+++ .+++ -|. |
T Consensus 175 a~~~l~~l~~~~~Da~flDgFsP~kN-PeLWs~e~f~~l~~~~~pgg~laTYt-----aag~VRR---~L~~aGF~--V- 242 (308)
T 3vyw_A 175 ARKRIKEVENFKADAVFHDAFSPYKN-PELWTLDFLSLIKERIDEKGYWVSYS-----SSLSVRK---SLLTLGFK--V- 242 (308)
T ss_dssp HHHHGGGCCSCCEEEEEECCSCTTTS-GGGGSHHHHHHHHTTEEEEEEEEESC-----CCHHHHH---HHHHTTCE--E-
T ss_pred HHHHHhhhcccceeEEEeCCCCcccC-cccCCHHHHHHHHHHhCCCcEEEEEe-----CcHHHHH---HHHHCCCE--E-
Confidence 99999876445899999999887654 46899999999999999999999743 2333333 3333 362 3
Q ss_pred EeEEeecccCCC-eeEEEEcC
Q 020933 268 YAWTTVPTYPRT-FLPSCSAV 287 (319)
Q Consensus 268 ~~~~~vP~~~~g-~~~~~S~~ 287 (319)
..+|.++.- .+++++..
T Consensus 243 ---~k~~G~g~KReml~A~~~ 260 (308)
T 3vyw_A 243 ---GSSREIGRKRKGTVASLK 260 (308)
T ss_dssp ---EEEECC---CEEEEEESS
T ss_pred ---EecCCCCCCCceeEEecC
Confidence 356777643 34777765
No 279
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.57 E-value=4.2e-07 Score=82.66 Aligned_cols=132 Identities=17% Similarity=0.170 Sum_probs=98.8
Q ss_pred HHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChH
Q 020933 111 AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV 190 (319)
Q Consensus 111 ~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~ 190 (319)
.|-+++..+ ++..+||+=+|+|.++.++++. ..+++.||.++..++..++++.. ..+++++..|+.
T Consensus 82 ~yf~~l~~~------n~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~------~~~~~V~~~D~~ 147 (283)
T 2oo3_A 82 EYISVIKQI------NLNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHF------NKKVYVNHTDGV 147 (283)
T ss_dssp HHHHHHHHH------SSSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCT------TSCEEEECSCHH
T ss_pred HHHHHHHHh------cCCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCc------CCcEEEEeCcHH
Confidence 455555441 4678999999999999999984 37999999999999999999864 368999999999
Q ss_pred HHHHhC--CCCCccEEEEcCCCCCCCccccchHHHHHHHHH--hcCCCcEEEEecCCcccChHHHHHHHHHHHhhc
Q 020933 191 AFLKAV--PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAK--ALRPGGVVSTQAESIWLHMHIIEDIVANCRQIF 262 (319)
Q Consensus 191 ~~l~~~--~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~--~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F 262 (319)
..+... +..+||+|++|++..... + ....++.+.+ .+.|+|+++++- |.......+.+.+.+++.-
T Consensus 148 ~~L~~l~~~~~~fdLVfiDPPYe~k~---~-~~~vl~~L~~~~~r~~~Gi~v~WY--Pi~~~~~~~~~~~~l~~~~ 217 (283)
T 2oo3_A 148 SKLNALLPPPEKRGLIFIDPSYERKE---E-YKEIPYAIKNAYSKFSTGLYCVWY--PVVNKAWTEQFLRKMREIS 217 (283)
T ss_dssp HHHHHHCSCTTSCEEEEECCCCCSTT---H-HHHHHHHHHHHHHHCTTSEEEEEE--EESSHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCCCccEEEECCCCCCCc---H-HHHHHHHHHHhCccCCCeEEEEEE--eccchHHHHHHHHHHHhcC
Confidence 988753 245799999998654211 1 2234545543 677999999875 4556667778888887543
No 280
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.57 E-value=9.8e-08 Score=97.79 Aligned_cols=114 Identities=16% Similarity=0.119 Sum_probs=77.5
Q ss_pred CCceeeEeeccccHHHHHHHhcC------------------------------------------CCceEEEEECChHHH
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS------------------------------------------SVEKIDICEIDKMVV 163 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~------------------------------------------~~~~v~~VEid~~vi 163 (319)
....|||.+||+|+++.+++... +..+|+++|+|+.++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 45689999999999999876531 124799999999999
Q ss_pred HHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHH---HhcCCCcEEEEe
Q 020933 164 DVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVA---KALRPGGVVSTQ 240 (319)
Q Consensus 164 ~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~---~~LkpgG~lv~~ 240 (319)
+.|++++... +.. ..+++.++|+.++......++||+||+|++........-...++|+.+. +.+.|||.+.+-
T Consensus 270 ~~A~~N~~~a--gv~-~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 270 QRARTNARLA--GIG-ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHT--TCG-GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHc--CCC-CceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 9999998765 333 3699999998875322112389999998875432211111234555554 445579987765
Q ss_pred cC
Q 020933 241 AE 242 (319)
Q Consensus 241 ~~ 242 (319)
+.
T Consensus 347 t~ 348 (703)
T 3v97_A 347 SA 348 (703)
T ss_dssp ES
T ss_pred eC
Confidence 43
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.56 E-value=2e-07 Score=95.47 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=86.6
Q ss_pred CCceeeEeeccccHHHHHHHhcCC---CceEEEEECChHHHHHH--HhccccccCCCCCCCeEEEEcChHHHHHhCCCCC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSS---VEKIDICEIDKMVVDVS--KQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGT 200 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~---~~~v~~VEid~~vi~~a--k~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~ 200 (319)
.+.+|||.|||+|+++..++++.+ ..+++++|+|+.++++| +.++.............+..+|....... ...+
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~-~~~k 399 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPE-DFAN 399 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGG-GGTT
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccccc-ccCC
Confidence 467999999999999999887643 35799999999999999 55443210000112346666675542111 2468
Q ss_pred ccEEEEcCCCCCCCc--cc-----------------------cchHHHHHHHHHhcCCCcEEEEecCCcccC--hHHHHH
Q 020933 201 YDAVIVDSSDPIGPA--QE-----------------------LFEKPFFESVAKALRPGGVVSTQAESIWLH--MHIIED 253 (319)
Q Consensus 201 fDvIi~D~~~~~~~~--~~-----------------------l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~--~~~~~~ 253 (319)
||+||++++...... .. -....|++.+.+.|+|||.+++-..+.|.. ......
T Consensus 400 FDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kk 479 (878)
T 3s1s_A 400 VSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKA 479 (878)
T ss_dssp EEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHH
T ss_pred CCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHH
Confidence 999999887522110 00 013458899999999999998876554442 223344
Q ss_pred HHHHHHhhc
Q 020933 254 IVANCRQIF 262 (319)
Q Consensus 254 ~~~~l~~~F 262 (319)
+-+.+.+.+
T Consensus 480 LRk~LLe~~ 488 (878)
T 3s1s_A 480 FREFLVGNF 488 (878)
T ss_dssp HHHHHTTTT
T ss_pred HHHHHHhCC
Confidence 444444444
No 282
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.53 E-value=1.7e-07 Score=84.71 Aligned_cols=132 Identities=11% Similarity=0.076 Sum_probs=83.4
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
....+|||||||.|+.+..+++..+..+++++++...+. ..+.....+ ..++..+.+|+.. ...++++||+|
T Consensus 73 ~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~-----~~pi~~~~~-g~~ii~~~~~~dv--~~l~~~~~DlV 144 (277)
T 3evf_A 73 KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-----EKPMNVQSL-GWNIITFKDKTDI--HRLEPVKCDTL 144 (277)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC-----CCCCCCCBT-TGGGEEEECSCCT--TTSCCCCCSEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc-----ccccccCcC-CCCeEEEecccee--hhcCCCCccEE
Confidence 355689999999999999988876677888888874421 001110001 1134444554311 12236789999
Q ss_pred EEcCCCCCCCc--cccchHHHHHHHHHhcCCC-cEEEEecCCcccChHHHHHHHHHHHhhcCCcee
Q 020933 205 IVDSSDPIGPA--QELFEKPFFESVAKALRPG-GVVSTQAESIWLHMHIIEDIVANCRQIFKGSVN 267 (319)
Q Consensus 205 i~D~~~~~~~~--~~l~~~~f~~~~~~~Lkpg-G~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~ 267 (319)
++|.....+.. .+..+...++.+.++|+|| |.|++-.-.++ ...+..+++.+++.|. .|.
T Consensus 145 lsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~py--g~~~~~l~~~lk~~F~-~V~ 207 (277)
T 3evf_A 145 LCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPY--MPDVLEKLELLQRRFG-GTV 207 (277)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTT--SHHHHHHHHHHHHHHC-CEE
T ss_pred EecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCC--CccHHHHHHHHHHhcC-CEE
Confidence 99986553321 1111223478889999999 99999532211 4566788999999994 453
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.43 E-value=2.3e-07 Score=83.97 Aligned_cols=140 Identities=11% Similarity=0.035 Sum_probs=88.3
Q ss_pred hHHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEc--
Q 020933 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG-- 187 (319)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~-- 187 (319)
+--.++.... + .....+|||||||.|+.+..+++..+..+|+++|+...+...+... . .+ ..++.....
T Consensus 77 fKL~ei~eK~-~--Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~----~~-g~~ii~~~~~~ 147 (282)
T 3gcz_A 77 AKLRWMEERG-Y--VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-T----TL-GWNLIRFKDKT 147 (282)
T ss_dssp HHHHHHHHTT-S--CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-C----BT-TGGGEEEECSC
T ss_pred HHHHHHHHhc-C--CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-c----cC-CCceEEeeCCc
Confidence 3334555443 2 2355699999999999999988766778899999976532111100 0 01 123333332
Q ss_pred ChHHHHHhCCCCCccEEEEcCCCCCCCc--cccchHHHHHHHHHhcCCC--cEEEEecCCcccC--hHHHHHHHHHHHhh
Q 020933 188 DGVAFLKAVPEGTYDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPG--GVVSTQAESIWLH--MHIIEDIVANCRQI 261 (319)
Q Consensus 188 D~~~~l~~~~~~~fDvIi~D~~~~~~~~--~~l~~~~f~~~~~~~Lkpg--G~lv~~~~~~~~~--~~~~~~~~~~l~~~ 261 (319)
|.. ..+.+++|+|++|.....+.. .+..+...++.+.+.|+|| |.||+-. +. ...+..+++.+++.
T Consensus 148 dv~----~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~Kv----F~pyg~~~~~l~~~lk~~ 219 (282)
T 3gcz_A 148 DVF----NMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKV----LCPYTPLIMEELSRLQLK 219 (282)
T ss_dssp CGG----GSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE----SCCCSHHHHHHHHHHHHH
T ss_pred chh----hcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEE----ecCCCccHHHHHHHHHHh
Confidence 432 234688999999987653321 1122234577788999999 9999853 33 45677889999999
Q ss_pred cCCcee
Q 020933 262 FKGSVN 267 (319)
Q Consensus 262 F~~~v~ 267 (319)
|. .|.
T Consensus 220 F~-~V~ 224 (282)
T 3gcz_A 220 HG-GGL 224 (282)
T ss_dssp HC-CEE
T ss_pred cC-CEE
Confidence 94 453
No 284
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.39 E-value=5.5e-07 Score=91.03 Aligned_cols=107 Identities=18% Similarity=0.214 Sum_probs=74.1
Q ss_pred CceeeEeeccccHHHHHHHhc----C---------CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHH
Q 020933 127 PKKVLVIGGGDGGVLREVSRH----S---------SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL 193 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~----~---------~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l 193 (319)
.+.|||||||+|.++..+++. . ...+|.+||.++..+...++... + +++ .+++++.+|++++-
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-N--g~~-d~VtVI~gd~eev~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-R--TWK-RRVTIIESDMRSLP 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-H--TTT-TCSEEEESCGGGHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-c--CCC-CeEEEEeCchhhcc
Confidence 457999999999996543221 1 23489999999977665554432 2 444 48999999999884
Q ss_pred Hh---CCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEE
Q 020933 194 KA---VPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (319)
Q Consensus 194 ~~---~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~ 239 (319)
.. ...++.|+||+..-...+. .++ ..+.+..+.+.|||||+++=
T Consensus 486 lp~~~~~~ekVDIIVSElmGsfl~-nEL-~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSFGD-NEL-SPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTTBG-GGS-HHHHHHTTGGGSCTTCEEES
T ss_pred cccccCCCCcccEEEEeccccccc-hhc-cHHHHHHHHHhCCCCcEEEC
Confidence 31 1147899999876543322 122 35678888899999999873
No 285
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.38 E-value=3e-07 Score=92.66 Aligned_cols=103 Identities=15% Similarity=0.199 Sum_probs=72.7
Q ss_pred CceeeEeeccccHHHHHHHh---cC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 127 PKKVLVIGGGDGGVLREVSR---HS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~---~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
.+.|||+|||+|.+....++ .. ...+|.+||.++. ...+++....+ +++ .+|+++.+|.+++- . +++.|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N--~~~-dkVtVI~gd~eev~--L-PEKVD 430 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFE--EWG-SQVTVVSSDMREWV--A-PEKAD 430 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHH--TTG-GGEEEEESCTTTCC--C-SSCEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhc--cCC-CeEEEEeCcceecc--C-CcccC
Confidence 45799999999998555443 22 1237899999985 55666655444 444 48999999998872 3 58999
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEE
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVS 238 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv 238 (319)
+||+..-.....-+. -.+.+....+.|||||+++
T Consensus 431 IIVSEwMG~fLl~E~--mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 431 IIVSELLGSFADNEL--SPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEECCCCBTTBGGGC--HHHHHHHHGGGEEEEEEEE
T ss_pred EEEEEcCcccccccC--CHHHHHHHHHhcCCCcEEc
Confidence 999766544332222 2356777789999999987
No 286
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.37 E-value=6.2e-07 Score=81.86 Aligned_cols=78 Identities=21% Similarity=0.305 Sum_probs=57.7
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCC--ceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHH-HhCCC-C-
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSV--EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL-KAVPE-G- 199 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~--~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l-~~~~~-~- 199 (319)
....+|||||||+|.++..+++.... .+|++||+|+.+++.+++++ . ++++++++|+.++- ....+ .
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~------~~v~~i~~D~~~~~~~~~~~~~~ 112 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G------ELLELHAGDALTFDFGSIARPGD 112 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G------GGEEEEESCGGGCCGGGGSCSSS
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C------CCcEEEECChhcCChhHhccccc
Confidence 35679999999999999999987421 34999999999999999873 2 47999999998752 11101 1
Q ss_pred -CccEEEEcCCC
Q 020933 200 -TYDAVIVDSSD 210 (319)
Q Consensus 200 -~fDvIi~D~~~ 210 (319)
..+.||.+++.
T Consensus 113 ~~~~~vv~NlPY 124 (279)
T 3uzu_A 113 EPSLRIIGNLPY 124 (279)
T ss_dssp SCCEEEEEECCH
T ss_pred CCceEEEEccCc
Confidence 23467766643
No 287
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.36 E-value=5.2e-07 Score=81.14 Aligned_cols=78 Identities=14% Similarity=0.183 Sum_probs=57.0
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH-HHhCC--CCCc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF-LKAVP--EGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~-l~~~~--~~~f 201 (319)
....+|||||||+|.++. +.+ ....+|++||+|+.+++.+++++... ++++++++|+.++ +.... .+..
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~~------~~v~~i~~D~~~~~~~~~~~~~~~~ 91 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFLG------PKLTIYQQDAMTFNFGELAEKMGQP 91 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTTG------GGEEEECSCGGGCCHHHHHHHHTSC
T ss_pred CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhccC------CceEEEECchhhCCHHHhhcccCCc
Confidence 345789999999999999 654 32223999999999999999987532 4899999998874 21110 1235
Q ss_pred cEEEEcCCC
Q 020933 202 DAVIVDSSD 210 (319)
Q Consensus 202 DvIi~D~~~ 210 (319)
|.|+.+++.
T Consensus 92 ~~vvsNlPY 100 (252)
T 1qyr_A 92 LRVFGNLPY 100 (252)
T ss_dssp EEEEEECCT
T ss_pred eEEEECCCC
Confidence 788877654
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.34 E-value=2.5e-06 Score=77.75 Aligned_cols=140 Identities=10% Similarity=0.038 Sum_probs=86.7
Q ss_pred HHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEc-ChHH
Q 020933 113 QEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG-DGVA 191 (319)
Q Consensus 113 ~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~-D~~~ 191 (319)
.++... .+ ..+..+||||||+.|+.+..+++..++..|+++|+...... .+.....+...-+.+..+ |.+.
T Consensus 71 ~ei~ek-~l--~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~-----~P~~~~~~~~~iv~~~~~~di~~ 142 (300)
T 3eld_A 71 RWLHER-GY--LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHE-----KPIHMQTLGWNIVKFKDKSNVFT 142 (300)
T ss_dssp HHHHHH-TS--CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSC-----CCCCCCBTTGGGEEEECSCCTTT
T ss_pred HHHHHh-CC--CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccc-----ccccccccCCceEEeecCceeee
Confidence 444444 33 24678999999999999999998766778999999653210 010000001112333322 3222
Q ss_pred HHHhCCCCCccEEEEcCCCCCCCc--cccchHHHHHHHHHhcCCC-cEEEEecCCcccChHHHHHHHHHHHhhcCCcee
Q 020933 192 FLKAVPEGTYDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPG-GVVSTQAESIWLHMHIIEDIVANCRQIFKGSVN 267 (319)
Q Consensus 192 ~l~~~~~~~fDvIi~D~~~~~~~~--~~l~~~~f~~~~~~~Lkpg-G~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~ 267 (319)
...+++|+|++|.....+.. .+..+...++.+.+.|+|| |.||+-.-.++ ...+..++..+++.|. .|.
T Consensus 143 ----l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~y--G~~~~~ll~~lk~~F~-~V~ 214 (300)
T 3eld_A 143 ----MPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPY--HPDVIEKLERLQLRFG-GGI 214 (300)
T ss_dssp ----SCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTT--SHHHHHHHHHHHHHHC-CEE
T ss_pred ----cCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccc--CccHHHHHHHHHHhCC-cEE
Confidence 23578999999986553321 1122234577788999999 99998532111 4567788999999994 453
No 289
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=98.19 E-value=9.8e-06 Score=73.62 Aligned_cols=150 Identities=17% Similarity=0.187 Sum_probs=87.2
Q ss_pred hHHHHHHHhccc--cCCCCCceeeEeec------cccHHHHHHHhcCCC-ceEEEEECChHHHHHHHhccccccCCCCCC
Q 020933 110 CAYQEMITHLPL--CSIPNPKKVLVIGG------GDGGVLREVSRHSSV-EKIDICEIDKMVVDVSKQFFPDVAVGFEDP 180 (319)
Q Consensus 110 ~~Y~e~l~~l~l--~~~~~~~~VL~IG~------G~G~~~~~l~~~~~~-~~v~~VEid~~vi~~ak~~~~~~~~~~~~~ 180 (319)
..|+++-..+-- +..|...+|||+|+ --|+. .+.+..+. ..|+.+|+.+... +.
T Consensus 91 ~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s---------------da 153 (344)
T 3r24_A 91 AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS---------------DA 153 (344)
T ss_dssp HHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC---------------SS
T ss_pred HHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc---------------CC
Confidence 457766555421 23567789999996 44542 22223333 5899999987541 12
Q ss_pred CeEEEEcChHHHHHhCCCCCccEEEEcCCCCC-CC--cc----ccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHH
Q 020933 181 RVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPI-GP--AQ----ELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIED 253 (319)
Q Consensus 181 ~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~-~~--~~----~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~ 253 (319)
. .++++|+..... ..+||+||+|..... +. .. ..+-+..++-+.++|+|||.|++-. +.... .+
T Consensus 154 ~-~~IqGD~~~~~~---~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV---FQGsg--~~ 224 (344)
T 3r24_A 154 D-STLIGDCATVHT---ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI---TEHSW--NA 224 (344)
T ss_dssp S-EEEESCGGGEEE---SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE---CSSSC--CH
T ss_pred C-eEEEcccccccc---CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE---ecCCC--HH
Confidence 2 459999765422 578999999987643 21 11 1123456777889999999999863 21222 23
Q ss_pred HHHHHHhhcCCceeEeEEeecccCCCeeEEEEc
Q 020933 254 IVANCRQIFKGSVNYAWTTVPTYPRTFLPSCSA 286 (319)
Q Consensus 254 ~~~~l~~~F~~~v~~~~~~vP~~~~g~~~~~S~ 286 (319)
.+..+++.|. .+..+......-.++..++|..
T Consensus 225 ~L~~lrk~F~-~VK~fK~ASRa~SsEvYLVG~g 256 (344)
T 3r24_A 225 DLYKLMGHFS-WWTAFVTNVNASSSEAFLIGAN 256 (344)
T ss_dssp HHHHHHTTEE-EEEEEEEGGGTTSSCEEEEEEE
T ss_pred HHHHHHhhCC-eEEEECCCCCCCCeeEEEEeee
Confidence 4555667894 4554432222222234466543
No 290
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.17 E-value=1e-05 Score=73.58 Aligned_cols=84 Identities=19% Similarity=0.160 Sum_probs=65.9
Q ss_pred HHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH
Q 020933 113 QEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF 192 (319)
Q Consensus 113 ~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~ 192 (319)
++++..+. ......+||.+||.|+.+..+++. ..+|+++|.|+.+++.+++ +.. ++++++++|..++
T Consensus 12 ~e~le~L~---~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~-------~rv~lv~~~f~~l 78 (285)
T 1wg8_A 12 QEALDLLA---VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL-------PGLTVVQGNFRHL 78 (285)
T ss_dssp HHHHHHHT---CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC-------TTEEEEESCGGGH
T ss_pred HHHHHhhC---CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc-------CCEEEEECCcchH
Confidence 44554432 234579999999999999999988 3689999999999999998 642 5999999998776
Q ss_pred ---HHhCCCCCccEEEEcCC
Q 020933 193 ---LKAVPEGTYDAVIVDSS 209 (319)
Q Consensus 193 ---l~~~~~~~fDvIi~D~~ 209 (319)
+.....+++|.|+.|+-
T Consensus 79 ~~~L~~~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 79 KRHLAALGVERVDGILADLG 98 (285)
T ss_dssp HHHHHHTTCSCEEEEEEECS
T ss_pred HHHHHHcCCCCcCEEEeCCc
Confidence 44443368999998653
No 291
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.02 E-value=5.5e-05 Score=67.56 Aligned_cols=140 Identities=16% Similarity=0.114 Sum_probs=84.8
Q ss_pred hHHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCe---EEEE
Q 020933 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRV---TLHI 186 (319)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v---~v~~ 186 (319)
+--.|+-..- ...+..+||||||+-|+.+..+++..++..|.+..+.... .-.+.. ...+.+ ++..
T Consensus 60 yKL~EIdeK~---likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-----~~~P~~---~~~~Gv~~i~~~~ 128 (269)
T 2px2_A 60 AKLRWLVERR---FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-----HEEPML---MQSYGWNIVTMKS 128 (269)
T ss_dssp HHHHHHHHTT---SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-----SCCCCC---CCSTTGGGEEEEC
T ss_pred HHHHHHHHcC---CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-----ccCCCc---ccCCCceEEEeec
Confidence 3335555442 2345789999999999999999887444455555543331 001110 001234 4554
Q ss_pred c-ChHHHHHhCCCCCccEEEEcCCCCCCCc--cccchHHHHHHHHHhcCCCc-EEEEecCCcccChHHHHHHHHHHHhhc
Q 020933 187 G-DGVAFLKAVPEGTYDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPGG-VVSTQAESIWLHMHIIEDIVANCRQIF 262 (319)
Q Consensus 187 ~-D~~~~l~~~~~~~fDvIi~D~~~~~~~~--~~l~~~~f~~~~~~~LkpgG-~lv~~~~~~~~~~~~~~~~~~~l~~~F 262 (319)
+ |.++. ...++|+|++|.....+.. .+.-+...++.+.+.|+||| .|++-+-. .....+.++++.+++.|
T Consensus 129 G~Df~~~----~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq--g~~~~~~~~l~~lk~~F 202 (269)
T 2px2_A 129 GVDVFYK----PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC--PYMPKVIEKLESLQRRF 202 (269)
T ss_dssp SCCGGGS----CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC--TTSHHHHHHHHHHHHHH
T ss_pred cCCccCC----CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC--CCchHHHHHHHHHHHHc
Confidence 7 97652 2468999999987653221 11112225677789999999 88885411 11256777888999999
Q ss_pred CCcee
Q 020933 263 KGSVN 267 (319)
Q Consensus 263 ~~~v~ 267 (319)
. .+.
T Consensus 203 ~-~vk 206 (269)
T 2px2_A 203 G-GGL 206 (269)
T ss_dssp C-CEE
T ss_pred C-CEE
Confidence 5 443
No 292
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.96 E-value=2.7e-05 Score=79.13 Aligned_cols=114 Identities=19% Similarity=0.293 Sum_probs=82.8
Q ss_pred CceeeEeeccccHHHHHHHhcC------------CCceEEEEEC---ChHHHHHHHhccccc-----------cC---C-
Q 020933 127 PKKVLVIGGGDGGVLREVSRHS------------SVEKIDICEI---DKMVVDVSKQFFPDV-----------AV---G- 176 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~------------~~~~v~~VEi---d~~vi~~ak~~~~~~-----------~~---~- 176 (319)
.-+|||+|.|+|.+.....+.. ...+++.+|. +++.+..+-..++.. .. +
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3589999999999876654321 1246899999 888877544433321 00 0
Q ss_pred ----CC--CCCeEEEEcChHHHHHhCC---CCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 177 ----FE--DPRVTLHIGDGVAFLKAVP---EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 177 ----~~--~~~v~v~~~D~~~~l~~~~---~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
++ .-+++++.+|+.+.+.+.. ...||+|+.|.+.|... ..+++.++|+.++++++|||.++..+
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~n-p~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKN-PDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGC-GGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCC-hhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 11 2467789999999987652 36799999999876543 45889999999999999999998754
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.95 E-value=7.5e-05 Score=65.89 Aligned_cols=141 Identities=13% Similarity=0.107 Sum_probs=92.7
Q ss_pred hhHHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEc-
Q 020933 109 ECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG- 187 (319)
Q Consensus 109 e~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~- 187 (319)
.+.-.++.... ++ ....+||||||+.|+.+..++...++.+|.++|+-+.-. ..|.+-..+.-+.++++.+
T Consensus 64 ~~KL~ei~ek~-~l--~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~gh-----e~P~~~~s~gwn~v~fk~gv 135 (267)
T 3p8z_A 64 SAKLQWFVERN-MV--IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGH-----EEPVPMSTYGWNIVKLMSGK 135 (267)
T ss_dssp HHHHHHHHHTT-SS--CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTS-----CCCCCCCCTTTTSEEEECSC
T ss_pred HHHHHHHHHhc-CC--CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCc-----cCcchhhhcCcCceEEEecc
Confidence 34445666554 22 345699999999999999988877788999999976532 1122211223357999999
Q ss_pred ChHHHHHhCCCCCccEEEEcCCCCCCCc--cccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcCC
Q 020933 188 DGVAFLKAVPEGTYDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFKG 264 (319)
Q Consensus 188 D~~~~l~~~~~~~fDvIi~D~~~~~~~~--~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 264 (319)
|.... +...+|.|+||.....+.+ ..--+...++.+.+.|++ |-|++-.-+++. ..+.+.++.++..|.+
T Consensus 136 Dv~~~----~~~~~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~--p~v~e~l~~lq~~fgg 207 (267)
T 3p8z_A 136 DVFYL----PPEKCDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM--PTVIEHLERLQRKHGG 207 (267)
T ss_dssp CGGGC----CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS--HHHHHHHHHHHHHHCC
T ss_pred ceeec----CCccccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC--hhHHHHHHHHHHHhCC
Confidence 86332 2477999999987632221 111233467888899998 888886544432 2344677888888953
No 294
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.89 E-value=3.4e-05 Score=78.62 Aligned_cols=115 Identities=21% Similarity=0.266 Sum_probs=80.6
Q ss_pred CCceeeEeeccccHHHHHHHhcC------------CCceEEEEEC---ChHHHHHHHhcccccc--------------C-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS------------SVEKIDICEI---DKMVVDVSKQFFPDVA--------------V- 175 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~------------~~~~v~~VEi---d~~vi~~ak~~~~~~~--------------~- 175 (319)
.+-+|||+|.|+|.....+.+.. ...+++.+|. +.+.+..+-+.++... .
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 34699999999999877654421 1257899999 4444443333333210 0
Q ss_pred ----CCCC--CCeEEEEcChHHHHHhCC---CCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 176 ----GFED--PRVTLHIGDGVAFLKAVP---EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 176 ----~~~~--~~v~v~~~D~~~~l~~~~---~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.+++ -+++++.||+.+.+.+.. ...+|+|++|.+.|... ..+++.++|+.+.++++|||.++..+
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~n-p~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKN-PDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--C-CTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCC-hhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 0222 367889999999997652 36899999999887654 35889999999999999999998654
No 295
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.84 E-value=6.1e-05 Score=68.50 Aligned_cols=141 Identities=16% Similarity=0.191 Sum_probs=90.8
Q ss_pred hHHHHHHHhccccCCCCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEc-C
Q 020933 110 CAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG-D 188 (319)
Q Consensus 110 ~~Y~e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~-D 188 (319)
+.-.++.... + .....+||||||+.|+.+..++...++.+|.++|+-..-.+ .|.+-..++-.-+.++.+ |
T Consensus 81 ~KL~ei~~~~-~--l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he-----~P~~~~ql~w~lV~~~~~~D 152 (321)
T 3lkz_A 81 AKLRWLVERR-F--LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHE-----EPQLVQSYGWNIVTMKSGVD 152 (321)
T ss_dssp HHHHHHHHTT-S--CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSC-----CCCCCCBTTGGGEEEECSCC
T ss_pred HHHHHHHHhc-C--CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCcc-----CcchhhhcCCcceEEEeccC
Confidence 4445665552 2 23456999999999999998888777889999999754211 111111122234777777 7
Q ss_pred hHHHHHhCCCCCccEEEEcCCCCCCCc--cccchHHHHHHHHHhcCCC-cEEEEecCCcccChHHHHHHHHHHHhhcCC
Q 020933 189 GVAFLKAVPEGTYDAVIVDSSDPIGPA--QELFEKPFFESVAKALRPG-GVVSTQAESIWLHMHIIEDIVANCRQIFKG 264 (319)
Q Consensus 189 ~~~~l~~~~~~~fDvIi~D~~~~~~~~--~~l~~~~f~~~~~~~Lkpg-G~lv~~~~~~~~~~~~~~~~~~~l~~~F~~ 264 (319)
.+.. +...+|+|++|.....+.+ ..--+...++.+.+.|++| |-||+-.-+++. ..+.+.++.++..|.+
T Consensus 153 v~~l----~~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~--~~v~e~l~~lq~~fgg 225 (321)
T 3lkz_A 153 VFYR----PSECCDTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM--PKVIEKMELLQRRYGG 225 (321)
T ss_dssp TTSS----CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS--HHHHHHHHHHHHHHCC
T ss_pred HhhC----CCCCCCEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC--hHHHHHHHHHHHHhCC
Confidence 5332 2467999999987433322 1112334677888999999 999986544332 3445778888888953
No 296
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.84 E-value=5.1e-05 Score=75.18 Aligned_cols=113 Identities=15% Similarity=0.115 Sum_probs=75.8
Q ss_pred CCceeeEeeccccHHHHHHHhc----CC---------CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH----SS---------VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF 192 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~----~~---------~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~ 192 (319)
...+|+|-+||+|+++..+.++ .. ...+.++|+++....+|+-++-.. +. ...++..+|....
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh--g~--~~~~I~~~dtL~~ 292 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH--GL--EYPRIDPENSLRF 292 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH--TC--SCCEEECSCTTCS
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc--CC--ccccccccccccC
Confidence 3568999999999998876543 11 246999999999999999875443 22 2346778887643
Q ss_pred HH-h-CCCCCccEEEEcCCCCCCC------------ccccchHHHHHHHHHhcC-------CCcEEEEecC
Q 020933 193 LK-A-VPEGTYDAVIVDSSDPIGP------------AQELFEKPFFESVAKALR-------PGGVVSTQAE 242 (319)
Q Consensus 193 l~-~-~~~~~fDvIi~D~~~~~~~------------~~~l~~~~f~~~~~~~Lk-------pgG~lv~~~~ 242 (319)
.. . ....+||+|+.+++..... ...-....|++.+.+.|| |||++++...
T Consensus 293 ~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 293 PLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp CGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred chhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 21 1 1235799999887653211 011113457888888887 7998877654
No 297
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.72 E-value=0.00011 Score=69.38 Aligned_cols=71 Identities=15% Similarity=0.187 Sum_probs=55.4
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+.+|||||++.|+.+..++++. .+|++||+.+.--.+ . .+++++++.+|+..+.. +...||+|
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg--~~V~aVD~~~l~~~l-~----------~~~~V~~~~~d~~~~~~--~~~~~D~v 274 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRN--MWVYSVDNGPMAQSL-M----------DTGQVTWLREDGFKFRP--TRSNISWM 274 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT--CEEEEECSSCCCHHH-H----------TTTCEEEECSCTTTCCC--CSSCEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCC--CEEEEEEhhhcChhh-c----------cCCCeEEEeCccccccC--CCCCcCEE
Confidence 356799999999999999999884 589999986532111 1 35799999999988743 24689999
Q ss_pred EEcCCC
Q 020933 205 IVDSSD 210 (319)
Q Consensus 205 i~D~~~ 210 (319)
++|...
T Consensus 275 vsDm~~ 280 (375)
T 4auk_A 275 VCDMVE 280 (375)
T ss_dssp EECCSS
T ss_pred EEcCCC
Confidence 999865
No 298
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.67 E-value=0.00013 Score=69.34 Aligned_cols=109 Identities=13% Similarity=-0.025 Sum_probs=70.0
Q ss_pred CceeeEeeccccHHHHHHHhc-----------------CCCceEEEEECC-----------hHHHHHHHhccccccCCCC
Q 020933 127 PKKVLVIGGGDGGVLREVSRH-----------------SSVEKIDICEID-----------KMVVDVSKQFFPDVAVGFE 178 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~-----------------~~~~~v~~VEid-----------~~vi~~ak~~~~~~~~~~~ 178 (319)
+-+|+|+||++|..+..+... .|.-+|...|+- +...+..++....
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~------ 126 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR------ 126 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC------
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC------
Confidence 678999999999988765433 244567777876 4444443332211
Q ss_pred CCCeEEEEcChHHHHHhC-CCCCccEEEEcCCCCCCC--ccccch---------------------------------HH
Q 020933 179 DPRVTLHIGDGVAFLKAV-PEGTYDAVIVDSSDPIGP--AQELFE---------------------------------KP 222 (319)
Q Consensus 179 ~~~v~v~~~D~~~~l~~~-~~~~fDvIi~D~~~~~~~--~~~l~~---------------------------------~~ 222 (319)
..+-.++.+....|-.+. +++++|+|++...-+|.. +..+.. ..
T Consensus 127 ~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~ 206 (384)
T 2efj_A 127 KIGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTT 206 (384)
T ss_dssp CTTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHH
Confidence 123467777776664332 678999999877766532 111110 13
Q ss_pred HHHHHHHhcCCCcEEEEec
Q 020933 223 FFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 223 f~~~~~~~LkpgG~lv~~~ 241 (319)
|++..++.|+|||.+++..
T Consensus 207 FL~~Ra~eL~pGG~mvl~~ 225 (384)
T 2efj_A 207 FLRIHSEELISRGRMLLTF 225 (384)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhccCCeEEEEE
Confidence 5778899999999999886
No 299
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.64 E-value=0.00013 Score=69.10 Aligned_cols=117 Identities=15% Similarity=0.153 Sum_probs=71.6
Q ss_pred CCCceeeEeeccccHHHHHHH--------hc-------CCCceEEEEECChHHHHHHHhccccccCCC--------CCCC
Q 020933 125 PNPKKVLVIGGGDGGVLREVS--------RH-------SSVEKIDICEIDKMVVDVSKQFFPDVAVGF--------EDPR 181 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~--------~~-------~~~~~v~~VEid~~vi~~ak~~~~~~~~~~--------~~~~ 181 (319)
+.+-+|+|+|||+|.++..+. ++ .+.-+|...|+-..-....-+.++...... ...+
T Consensus 51 ~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 51 PPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCB
T ss_pred CCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCC
Confidence 456899999999999887652 11 245678888876554433333333221000 0012
Q ss_pred eEEEEcChHHHHHh-CCCCCccEEEEcCCCCCCC--cccc--------------------------------chHHHHHH
Q 020933 182 VTLHIGDGVAFLKA-VPEGTYDAVIVDSSDPIGP--AQEL--------------------------------FEKPFFES 226 (319)
Q Consensus 182 v~v~~~D~~~~l~~-~~~~~fDvIi~D~~~~~~~--~~~l--------------------------------~~~~f~~~ 226 (319)
-.++.+.+..|-.+ .++++||+|++...-+|.. +..+ .-..|++.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 23555555554322 3678999999977766643 1111 11247888
Q ss_pred HHHhcCCCcEEEEec
Q 020933 227 VAKALRPGGVVSTQA 241 (319)
Q Consensus 227 ~~~~LkpgG~lv~~~ 241 (319)
.++.|+|||.+++..
T Consensus 211 ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHhCCCCEEEEEE
Confidence 899999999999875
No 300
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.56 E-value=0.00076 Score=60.51 Aligned_cols=144 Identities=16% Similarity=0.133 Sum_probs=87.7
Q ss_pred CCCceeeEeeccccHHHHHHHhc-------CCCceEEEEE-----CChH-----------------------HHHHH--H
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRH-------SSVEKIDICE-----IDKM-----------------------VVDVS--K 167 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~-------~~~~~v~~VE-----id~~-----------------------vi~~a--k 167 (319)
.-|..|+|+|+-.|+.+..++.. .+..+|.+.| ..+. +-++. +
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 35789999999999988776541 3457888888 3210 11111 1
Q ss_pred hccccccCCCCCCCeEEEEcChHHHHHh----CCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 168 QFFPDVAVGFEDPRVTLHIGDGVAFLKA----VPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 168 ~~~~~~~~~~~~~~v~v~~~D~~~~l~~----~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
+++... +..+.+++++.|++.+.+.. .+..+||+|.+|... ..+ +...|+.+...|+|||++++.-..
T Consensus 148 ~~~~~~--g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y~~-----t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 148 ECSDFF--GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-YEP-----TKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp HTTSTT--TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-HHH-----HHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhhhc--CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-cch-----HHHHHHHHHHHhCCCcEEEEcCCC
Confidence 122222 22247999999999887654 335679999999842 111 567899999999999999986421
Q ss_pred cccChHHHHHHHHHHHhhcCCceeEeEEeecccCCCee
Q 020933 244 IWLHMHIIEDIVANCRQIFKGSVNYAWTTVPTYPRTFL 281 (319)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~F~~~v~~~~~~vP~~~~g~~ 281 (319)
+.. .....+.+.+.+.. ...-....|+++..-+
T Consensus 220 ---~~~-w~G~~~A~~ef~~~-~~~~i~~~p~~~~~~y 252 (257)
T 3tos_A 220 ---NPK-WPGENIAMRKVLGL-DHAPLRLLPGRPAPAY 252 (257)
T ss_dssp ---CTT-CTHHHHHHHHHTCT-TSSCCEECTTCSCCEE
T ss_pred ---CCC-ChHHHHHHHHHHhh-CCCeEEEccCCCCCEE
Confidence 111 11333444555532 2222246777775433
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.47 E-value=0.00012 Score=68.86 Aligned_cols=59 Identities=14% Similarity=0.060 Sum_probs=50.2
Q ss_pred CceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF 192 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~ 192 (319)
...|||||.|.|.+++.|++.....+|++||+|+.++...++.+ . .++++++.+|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~------~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E------GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T------TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c------CCCEEEEECCccch
Confidence 46899999999999999998633368999999999999988866 2 25899999999765
No 302
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.46 E-value=0.0002 Score=67.41 Aligned_cols=115 Identities=14% Similarity=0.078 Sum_probs=78.0
Q ss_pred CCCCceeeEeeccccHHHHHHHhc----------------CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRH----------------SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG 187 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~----------------~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~ 187 (319)
.+++-+|+|+||++|..+..+... .|.-+|...|+-..-....-+.++... ...+-.++.+
T Consensus 49 ~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~---~~~~~~f~~g 125 (359)
T 1m6e_X 49 VTTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN---DVDGVCFING 125 (359)
T ss_dssp SSSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC---SCTTCEEEEE
T ss_pred CCCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc---ccCCCEEEEe
Confidence 355678999999999876543322 455678889998887777777766431 1114467777
Q ss_pred ChHHHHHh-CCCCCccEEEEcCCCCCCC--ccc--------------------cch-------HHHHHHHHHhcCCCcEE
Q 020933 188 DGVAFLKA-VPEGTYDAVIVDSSDPIGP--AQE--------------------LFE-------KPFFESVAKALRPGGVV 237 (319)
Q Consensus 188 D~~~~l~~-~~~~~fDvIi~D~~~~~~~--~~~--------------------l~~-------~~f~~~~~~~LkpgG~l 237 (319)
....|-.+ .+++++|+|++...-+|.. +.. .|. ..|++..++.|+|||.+
T Consensus 126 vpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~m 205 (359)
T 1m6e_X 126 VPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRM 205 (359)
T ss_dssp EESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEE
T ss_pred cchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 76665433 2678999999876655532 111 221 24688889999999999
Q ss_pred EEec
Q 020933 238 STQA 241 (319)
Q Consensus 238 v~~~ 241 (319)
++..
T Consensus 206 vl~~ 209 (359)
T 1m6e_X 206 VLTI 209 (359)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9875
No 303
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.34 E-value=0.00072 Score=62.84 Aligned_cols=75 Identities=20% Similarity=0.200 Sum_probs=59.4
Q ss_pred CCceeeEeeccccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHH---HhCC-CCC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL---KAVP-EGT 200 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l---~~~~-~~~ 200 (319)
++..++|..+|.|+-+..+++. .+..+|+++|.|+.+++.++ .+. +.|+++++++..++. .... .++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~-------~~Rv~lv~~nF~~l~~~L~~~g~~~~ 128 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID-------DPRFSIIHGPFSALGEYVAERDLIGK 128 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC-------CTTEEEEESCGGGHHHHHHHTTCTTC
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc-------CCcEEEEeCCHHHHHHHHHhcCCCCc
Confidence 4578999999999999999986 46679999999999999995 441 369999999877653 3321 136
Q ss_pred ccEEEEcC
Q 020933 201 YDAVIVDS 208 (319)
Q Consensus 201 fDvIi~D~ 208 (319)
+|.|+.|+
T Consensus 129 vDgILfDL 136 (347)
T 3tka_A 129 IDGILLDL 136 (347)
T ss_dssp EEEEEEEC
T ss_pred ccEEEECC
Confidence 99999865
No 304
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.30 E-value=0.0031 Score=58.80 Aligned_cols=149 Identities=11% Similarity=0.148 Sum_probs=90.7
Q ss_pred CceeeEeeccccHHHHHHHhcCC-CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCCccEE
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSS-VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDAV 204 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~-~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~fDvI 204 (319)
+.+||||.||.|++...+.+..- ...|.++|+|+..++..+.+++. ..++.+|..++... .+...+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~---------~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH---------TQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc---------cccccCCHHHccHhHcCcCCcCEE
Confidence 45899999999999999987631 35799999999999999999853 24677888775421 111269999
Q ss_pred EEcCCCCC-CCc---------cccchHHHHHHHHHhcC--CCcEEEEecCCcccChHHHHHHHHHHHhh-cCCceeEeEE
Q 020933 205 IVDSSDPI-GPA---------QELFEKPFFESVAKALR--PGGVVSTQAESIWLHMHIIEDIVANCRQI-FKGSVNYAWT 271 (319)
Q Consensus 205 i~D~~~~~-~~~---------~~l~~~~f~~~~~~~Lk--pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~~v~~~~~ 271 (319)
+.+++... +.+ ......++++ +.+.++ |.-+++=|+.... ....+..+++.+++. | .+.+...
T Consensus 73 ~~gpPCq~fS~ag~~~g~~d~r~~l~~~~~~-~i~~~~~~P~~~~~ENV~~l~-~~~~~~~i~~~l~~~GY--~v~~~vl 148 (343)
T 1g55_A 73 LMSPPCQPFTRIGRQGDMTDSRTNSFLHILD-ILPRLQKLPKYILLENVKGFE-VSSTRDLLIQTIENCGF--QYQEFLL 148 (343)
T ss_dssp EECCC------------------CHHHHHHH-HGGGCSSCCSEEEEEEETTGG-GSHHHHHHHHHHHHTTE--EEEEEEE
T ss_pred EEcCCCcchhhcCCcCCccCccchHHHHHHH-HHHHhcCCCCEEEEeCCcccc-CHHHHHHHHHHHHHCCC--eeEEEEE
Confidence 99877421 111 0011123333 445667 8877765655432 335666777777653 3 2322222
Q ss_pred e-----ecccCCCeeEEEEcCC
Q 020933 272 T-----VPTYPRTFLPSCSAVN 288 (319)
Q Consensus 272 ~-----vP~~~~g~~~~~S~~~ 288 (319)
. +|......++++.+++
T Consensus 149 ~a~~~GvPQ~R~R~~iv~~~~~ 170 (343)
T 1g55_A 149 SPTSLGIPNSRLRYFLIAKLQS 170 (343)
T ss_dssp CGGGGTCSCCCCEEEEEEEESS
T ss_pred EHHHCCCCCcccEEEEEEEeCC
Confidence 1 4444333448888764
No 305
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.22 E-value=0.008 Score=55.70 Aligned_cols=146 Identities=14% Similarity=0.083 Sum_probs=92.9
Q ss_pred CceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEE
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~ 206 (319)
..+||||.||.|++...+.+. +...+.++|+|+..++..+.+++.. . .+|..++.... -..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~------~-----~~Di~~~~~~~-~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEK------P-----EGDITQVNEKT-IPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCC------C-----BSCGGGSCGGG-SCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCC------C-----cCCHHHcCHhh-CCCCCEEEE
Confidence 468999999999999999877 3577899999999999999998642 1 58888765432 246999998
Q ss_pred cCCCCC-CCc---------cccchHHHHHHHHHhcCCCcEEEEecCCcccC--hHHHHHHHHHHHhhcCCceeEeEEe--
Q 020933 207 DSSDPI-GPA---------QELFEKPFFESVAKALRPGGVVSTQAESIWLH--MHIIEDIVANCRQIFKGSVNYAWTT-- 272 (319)
Q Consensus 207 D~~~~~-~~~---------~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~--~~~~~~~~~~l~~~F~~~v~~~~~~-- 272 (319)
+++... +.+ ......++++.+ +.++|.-+++=|+.....+ ...+..+++.+++.= ..+.+....
T Consensus 78 gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i-~~~~P~~~~~ENV~gl~~~~~~~~~~~i~~~l~~~G-Y~v~~~vl~a~ 155 (327)
T 2c7p_A 78 GFPCQAFSISGKQKGFEDSRGTLFFDIARIV-REKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELD-YSFHAKVLNAL 155 (327)
T ss_dssp ECCCTTTCTTSCCCGGGSTTSCHHHHHHHHH-HHHCCSEEEEEEEGGGGTGGGGHHHHHHHHHHHHTT-BCCEEEEEEGG
T ss_pred CCCCCCcchhcccCCCcchhhHHHHHHHHHH-HhccCcEEEEeCcHHHHhccccHHHHHHHHHHHhCC-CEEEEEEEEHH
Confidence 776422 111 111123455544 4579987777676544322 346677777776541 223333222
Q ss_pred ---ecccCCCeeEEEEcC
Q 020933 273 ---VPTYPRTFLPSCSAV 287 (319)
Q Consensus 273 ---vP~~~~g~~~~~S~~ 287 (319)
+|......++++.++
T Consensus 156 ~~GvPQ~R~R~~iv~~~~ 173 (327)
T 2c7p_A 156 DYGIPQKRERIYMICFRN 173 (327)
T ss_dssp GGTCSBCCEEEEEEEEBG
T ss_pred HcCCCccceEEEEEEEeC
Confidence 333322344788766
No 306
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.15 E-value=0.00019 Score=58.82 Aligned_cols=59 Identities=14% Similarity=0.077 Sum_probs=42.8
Q ss_pred CCceeeEeecccc-HHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 126 NPKKVLVIGGGDG-GVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.+.+|||||||.| .++..|+++.+ ..|+++|++|..++ ++.+|.++-..+. -+.||+|
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g-~~V~atDInp~Av~-------------------~v~dDiF~P~~~~-Y~~~DLI 93 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSK-VDLVLTDIKPSHGG-------------------IVRDDITSPRMEI-YRGAALI 93 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSC-CEEEEECSSCSSTT-------------------EECCCSSSCCHHH-HTTEEEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhCC-CeEEEEECCccccc-------------------eEEccCCCCcccc-cCCcCEE
Confidence 4679999999999 69999987433 57999999987544 5556665432211 1479999
Q ss_pred E
Q 020933 205 I 205 (319)
Q Consensus 205 i 205 (319)
.
T Consensus 94 Y 94 (153)
T 2k4m_A 94 Y 94 (153)
T ss_dssp E
T ss_pred E
Confidence 6
No 307
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.10 E-value=0.00058 Score=62.34 Aligned_cols=47 Identities=19% Similarity=0.089 Sum_probs=41.2
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV 173 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~ 173 (319)
.....|||++||+|.++.++++.. .++++||+++.+++.|++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHHh
Confidence 356799999999999999998874 68999999999999999987653
No 308
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.06 E-value=0.0058 Score=57.74 Aligned_cols=149 Identities=15% Similarity=0.123 Sum_probs=93.0
Q ss_pred ceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh------CCCCCc
Q 020933 128 KKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA------VPEGTY 201 (319)
Q Consensus 128 ~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~------~~~~~f 201 (319)
-+|+||.||.|+++..+.+.. ...+.++|+|+..++..+.+++ ...++++|+.++... .....+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG-~~~v~avE~d~~a~~t~~~N~~---------~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG-FDVKMAVEIDQHAINTHAINFP---------RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT-CEEEEEECSCHHHHHHHHHHCT---------TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCC-CcEEEEEeCCHHHHHHHHHhCC---------CCceEecChhhcCHHHHHhhcccCCCe
Confidence 379999999999999998774 5667899999999999998875 356778888765221 123679
Q ss_pred cEEEEcCCCCC-CCc--------cccchHHHHHHHHHhcCCCcEEEEecCCccc--ChHHHHHHHHHHHhh-cCCce-eE
Q 020933 202 DAVIVDSSDPI-GPA--------QELFEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVANCRQI-FKGSV-NY 268 (319)
Q Consensus 202 DvIi~D~~~~~-~~~--------~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~~~~~l~~~-F~~~v-~~ 268 (319)
|+|+.+++... +.. ..-...+|++ +.+.++|.-+++=|+..... +...++.++ .+.+. | .+ .+
T Consensus 73 D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~-~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY--~v~~~ 148 (376)
T 3g7u_A 73 DGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYR-LVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSGDY--DILDP 148 (376)
T ss_dssp CEEEECCCCCTTC-------CHHHHHHHHHHHH-HHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHTTE--EECCC
T ss_pred eEEEecCCCCCcccccCCCCCCchHHHHHHHHH-HHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcCCC--ccCcE
Confidence 99998877432 111 0011123444 44567998888777755432 234566666 65543 3 23 22
Q ss_pred eEEe-----ecccCCCeeEEEEcCCCC
Q 020933 269 AWTT-----VPTYPRTFLPSCSAVNSD 290 (319)
Q Consensus 269 ~~~~-----vP~~~~g~~~~~S~~~~~ 290 (319)
.... +|......++++++++..
T Consensus 149 ~vl~a~dyGvPQ~R~R~~iig~r~~~~ 175 (376)
T 3g7u_A 149 IKVKASDYGAPTIRTRYFFIGVKKSLK 175 (376)
T ss_dssp EEEEGGGGTCSBCCEEEEEEEEEGGGC
T ss_pred EEEEHhhCCCCCCCcEEEEEEEeCCCC
Confidence 2222 444333344888876443
No 309
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.88 E-value=0.0017 Score=60.78 Aligned_cols=101 Identities=15% Similarity=0.178 Sum_probs=66.6
Q ss_pred CCCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 124 IPNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 124 ~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
.....+||++|+|. |..+.++++..+..+|++++.+++-++.+++.-... -+.....|..+-+.+...+.+|
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-------vi~~~~~~~~~~~~~~~~gg~D 260 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATH-------VINSKTQDPVAAIKEITDGGVN 260 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTSCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCE-------EecCCccCHHHHHHHhcCCCCc
Confidence 34568999999876 667778888655557999999999999988652110 0111112333333332234799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+||-... ..+.++.+.+.|+++|.+++-.
T Consensus 261 ~vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 261 FALESTG----------SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEEECSC----------CHHHHHHHHHTEEEEEEEEECC
T ss_pred EEEECCC----------CHHHHHHHHHHHhcCCEEEEeC
Confidence 9884322 1356888999999999998753
No 310
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.84 E-value=0.0028 Score=58.55 Aligned_cols=67 Identities=21% Similarity=0.328 Sum_probs=50.2
Q ss_pred CCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccc----------cchHHHHHHHHHhcCCCcEEEEecCCc
Q 020933 178 EDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQE----------LFEKPFFESVAKALRPGGVVSTQAESI 244 (319)
Q Consensus 178 ~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~----------l~~~~f~~~~~~~LkpgG~lv~~~~~~ 244 (319)
...+.+++++|+.+.++..++++||+|++|++........ .+..+.++.++++|+|||.+++.....
T Consensus 11 ~~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 11 TTSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp ECSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ecCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 4468899999999988766678999999998764331100 123467888899999999999986543
No 311
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.66 E-value=0.0048 Score=57.42 Aligned_cols=98 Identities=16% Similarity=0.151 Sum_probs=65.2
Q ss_pred CCCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEc------ChHHHHHhC
Q 020933 124 IPNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG------DGVAFLKAV 196 (319)
Q Consensus 124 ~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~------D~~~~l~~~ 196 (319)
.....+||++|+|. |..+.++++..+..+|++++.+++-++.+++.-. + .++.. |..+-+...
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~---~vi~~~~~~~~~~~~~i~~~ 238 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA-------D---LVLQISKESPQEIARKVEGQ 238 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------S---EEEECSSCCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC-------C---EEEcCcccccchHHHHHHHH
Confidence 34568999999875 6677788887665589999999999998886421 1 22222 122222221
Q ss_pred CCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 197 PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 197 ~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
..+.+|+||-... ....++...++|+++|.+++-.
T Consensus 239 ~~~g~D~vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 239 LGCKPEVTIECTG----------AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HTSCCSEEEECSC----------CHHHHHHHHHHSCTTCEEEECS
T ss_pred hCCCCCEEEECCC----------ChHHHHHHHHHhcCCCEEEEEe
Confidence 1257999984322 1246788899999999998753
No 312
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.64 E-value=0.012 Score=54.77 Aligned_cols=100 Identities=15% Similarity=0.130 Sum_probs=68.2
Q ss_pred CCCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE-----cChHHHHHhC-
Q 020933 124 IPNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAV- 196 (319)
Q Consensus 124 ~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~-----~D~~~~l~~~- 196 (319)
...+.+||++|+|. |..+.++++..+..+|++++.+++-++.+++. .. .-+.+.. .|..+.+.+.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~-------~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP-------EVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT-------TCEEEECCSCCHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch-------hcccccccccchHHHHHHHHHHh
Confidence 34678999999865 66777888876665699999999999999986 31 1222221 2223333322
Q ss_pred CCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 197 PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 197 ~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
....+|+|+-... ....++.+.+.|+++|.+++-.
T Consensus 249 ~g~g~Dvvid~~g----------~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 249 GGIEPAVALECTG----------VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SSCCCSEEEECSC----------CHHHHHHHHHHSCTTCEEEECC
T ss_pred CCCCCCEEEECCC----------ChHHHHHHHHHhcCCCEEEEEc
Confidence 2457999884322 2346888999999999998753
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.63 E-value=0.0039 Score=58.47 Aligned_cols=101 Identities=18% Similarity=0.235 Sum_probs=68.8
Q ss_pred CCCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh---CCCC
Q 020933 124 IPNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA---VPEG 199 (319)
Q Consensus 124 ~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~---~~~~ 199 (319)
...+.+||++|+|. |..+.++++..+..+|++++.+++-.+.+++.-... -+.....|..+.+.. ...+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-------vi~~~~~~~~~~i~~~~~~~~g 252 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA-------TVDPSAGDVVEAIAGPVGLVPG 252 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE-------EECTTSSCHHHHHHSTTSSSTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE-------EECCCCcCHHHHHHhhhhccCC
Confidence 34678999999865 667777888766668999999999999998752110 011112344455543 2234
Q ss_pred CccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 200 ~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.+|+||-... ..+.++.+.+.|+++|.+++-.
T Consensus 253 g~Dvvid~~G----------~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 253 GVDVVIECAG----------VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp CEEEEEECSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCEEEECCC----------CHHHHHHHHHHhccCCEEEEEe
Confidence 7999884321 2357889999999999998754
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.62 E-value=0.0037 Score=57.70 Aligned_cols=99 Identities=20% Similarity=0.323 Sum_probs=68.1
Q ss_pred CCCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 124 IPNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 124 ~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
.....+||++|+|. |..+.++++..+. +|++++.+++-++.+++.-... -+.....|..+.+... .+.+|
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~-------~i~~~~~~~~~~~~~~-~g~~d 234 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEV-------AVNARDTDPAAWLQKE-IGGAH 234 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSE-------EEETTTSCHHHHHHHH-HSSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCE-------EEeCCCcCHHHHHHHh-CCCCC
Confidence 34568999999875 7788888887654 8999999999999988742110 0111113444444432 34799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|+.... ..+.++.+.+.|+++|.+++..
T Consensus 235 ~vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 235 GVLVTAV----------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEEESSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred EEEEeCC----------CHHHHHHHHHHhccCCEEEEeC
Confidence 9985432 2357889999999999998753
No 315
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.56 E-value=0.0031 Score=58.56 Aligned_cols=100 Identities=21% Similarity=0.236 Sum_probs=66.6
Q ss_pred CCCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCCc
Q 020933 124 IPNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTY 201 (319)
Q Consensus 124 ~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~f 201 (319)
...+.+||++|+|. |..+.++++..+..+|++++.+++-++.+++.-... -+.....|..+.+.+. ....+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-------vi~~~~~~~~~~v~~~t~g~g~ 236 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD-------IINYKNGDIVEQILKATDGKGV 236 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCE-------EECGGGSCHHHHHHHHTTTCCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCce-------EEcCCCcCHHHHHHHHcCCCCC
Confidence 34578999999875 667777888766558999999999999998752110 0111113444444332 23469
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|+|+-.... .+.++.+.+.|+++|.+++-
T Consensus 237 D~v~d~~g~----------~~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 237 DKVVIAGGD----------VHTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EEEEECSSC----------TTHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCC----------hHHHHHHHHHHhcCCEEEEe
Confidence 999843221 13588899999999999864
No 316
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.53 E-value=0.092 Score=47.97 Aligned_cols=148 Identities=12% Similarity=0.104 Sum_probs=92.2
Q ss_pred eeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcC
Q 020933 129 KVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDS 208 (319)
Q Consensus 129 ~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~ 208 (319)
+||||-||.|++...+.+. +..-+-++|+|+..++.-+.+++. +++.+|..+.-... -...|+|+..+
T Consensus 2 kvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N~~~----------~~~~~DI~~i~~~~-~~~~D~l~ggp 69 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESNHSA----------KLIKGDISKISSDE-FPKCDGIIGGP 69 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHHCCS----------EEEESCGGGCCGGG-SCCCSEEECCC
T ss_pred eEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHHCCC----------CcccCChhhCCHhh-CCcccEEEecC
Confidence 6999999999999988776 456678999999999999988752 56789987764322 35689998655
Q ss_pred CCCC----CC------ccccchHHHHHHHHHhcCCCcEEEEecCCccc--ChHHHHHHHHHHHhhcCCceeEeEEe----
Q 020933 209 SDPI----GP------AQELFEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVANCRQIFKGSVNYAWTT---- 272 (319)
Q Consensus 209 ~~~~----~~------~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~~~~~l~~~F~~~v~~~~~~---- 272 (319)
+... +. +..-...++++ +.+.++|.-+++=|+..... +...+..+++.+.+.= ..+.+....
T Consensus 70 PCQ~fS~ag~~~g~~d~R~~L~~~~~r-~i~~~~Pk~~~~ENV~gl~~~~~~~~~~~i~~~l~~~G-Y~v~~~vlna~~y 147 (331)
T 3ubt_Y 70 PSQSWSEGGSLRGIDDPRGKLFYEYIR-ILKQKKPIFFLAENVKGMMAQRHNKAVQEFIQEFDNAG-YDVHIILLNANDY 147 (331)
T ss_dssp CGGGTEETTEECCTTCGGGHHHHHHHH-HHHHHCCSEEEEEECCGGGGCTTSHHHHHHHHHHHHHT-EEEEEEEEEGGGT
T ss_pred CCCCcCCCCCccCCCCchhHHHHHHHH-HHhccCCeEEEeeeecccccccccchhhhhhhhhccCC-cEEEEEecccccC
Confidence 4311 10 11111123443 45568998777766654432 2356777777776541 123333223
Q ss_pred -ecccCCCeeEEEEcCCCC
Q 020933 273 -VPTYPRTFLPSCSAVNSD 290 (319)
Q Consensus 273 -vP~~~~g~~~~~S~~~~~ 290 (319)
+|......++++.+++..
T Consensus 148 GvPQ~R~Rvfivg~r~~~~ 166 (331)
T 3ubt_Y 148 GVAQDRKRVFYIGFRKELN 166 (331)
T ss_dssp TCSBCCEEEEEEEEEGGGC
T ss_pred CCCcccceEEEEEEcCCCC
Confidence 333322344888876443
No 317
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.50 E-value=0.04 Score=51.10 Aligned_cols=150 Identities=12% Similarity=0.098 Sum_probs=91.5
Q ss_pred ceeeEeeccccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCCccEEE
Q 020933 128 KKVLVIGGGDGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYDAVI 205 (319)
Q Consensus 128 ~~VL~IG~G~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~fDvIi 205 (319)
-+++|+.||.|++...+.+.. +..-|.++|+|+...+..+.+++. ..++.+|..++... .+...+|+|+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~---------~~~~~~DI~~~~~~~~~~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE---------TNLLNRNIQQLTPQVIKKWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT---------SCEECCCGGGCCHHHHHHTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC---------CceeccccccCCHHHhccCCCCEEE
Confidence 489999999999999987763 125678999999999999998863 23567787665321 1123689999
Q ss_pred EcCCCCCC-C---------cc-ccchHHHHHHHHHhcC-CCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeEeEEe-
Q 020933 206 VDSSDPIG-P---------AQ-ELFEKPFFESVAKALR-PGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTT- 272 (319)
Q Consensus 206 ~D~~~~~~-~---------~~-~l~~~~f~~~~~~~Lk-pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~~~~~- 272 (319)
..++.... . .. .|+ .++++ +.+.++ |.-+++=|+..... ...++.+++.+++.= ..+.+....
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~-~~~~r-~i~~~~~P~~~vlENV~gl~~-~~~~~~i~~~l~~~G-Y~v~~~vl~a 150 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSF-LYLIG-ILDQLDNVDYILMENVKGFEN-STVRNLFIDKLKECN-FIYQEFLLCP 150 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCH-HHHHH-HGGGCTTCCEEEEEECTTGGG-SHHHHHHHHHHHHTT-EEEEEEEECT
T ss_pred ecCCCcchhhhhhccCCcCcccccH-HHHHH-HHHHhcCCCEEEEecchhhhh-hhHHHHHHHHHHhCC-CeEEEEEecH
Confidence 76654221 0 11 122 34444 444565 88777777755432 345666777766541 123322222
Q ss_pred ----ecccCCCeeEEEEcCCCC
Q 020933 273 ----VPTYPRTFLPSCSAVNSD 290 (319)
Q Consensus 273 ----vP~~~~g~~~~~S~~~~~ 290 (319)
+|......++++++++.+
T Consensus 151 ~~~GvPQ~R~R~fiva~r~~~~ 172 (333)
T 4h0n_A 151 STVGVPNSRLRYYCTARRNNLT 172 (333)
T ss_dssp TTTTCSCCCCEEEEEEEETTSC
T ss_pred HHcCCCccceEEEEEEEeCCCC
Confidence 343333344888887543
No 318
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.49 E-value=0.0048 Score=57.00 Aligned_cols=64 Identities=17% Similarity=0.243 Sum_probs=48.2
Q ss_pred CCeEEE-EcChHHHHHhCCCCCccEEEEcCCCCCCCc-----c--ccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 180 PRVTLH-IGDGVAFLKAVPEGTYDAVIVDSSDPIGPA-----Q--ELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 180 ~~v~v~-~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~-----~--~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
...+++ ++|+.++++..++++||+|++|++...... . .-+..+.++.+.++|+|||.+++....
T Consensus 37 ~~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~ 108 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGL 108 (319)
T ss_dssp CEEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred ccceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCc
Confidence 457888 999999998776779999999987644310 0 012346778889999999999998654
No 319
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.48 E-value=0.0031 Score=57.44 Aligned_cols=65 Identities=22% Similarity=0.289 Sum_probs=46.1
Q ss_pred CCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCc-----cc---c-----c---hHHHHHHHHHhcCCCcEEEEecC
Q 020933 179 DPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPA-----QE---L-----F---EKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 179 ~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~-----~~---l-----~---~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
..+++++++|+.++++..++++||+|++|++...... .. + + ..++++.+.++|||||.+++..+
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 3578999999999887665689999999987532110 00 0 1 13467788999999999988765
Q ss_pred C
Q 020933 243 S 243 (319)
Q Consensus 243 ~ 243 (319)
.
T Consensus 99 d 99 (297)
T 2zig_A 99 D 99 (297)
T ss_dssp C
T ss_pred C
Confidence 3
No 320
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.45 E-value=0.0035 Score=56.00 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=46.2
Q ss_pred CeEEEEcChHHHHHhCCCCCccEEEEcCCCCCC-Ccc-c--------cchHHHHHHHHHhcCCCcEEEEec
Q 020933 181 RVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIG-PAQ-E--------LFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 181 ~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~-~~~-~--------l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
..+++++|+.++++..++++||+|++|++.... ... . .+..++++.+.++|+|+|.+++..
T Consensus 4 ~~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 4 INKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SSSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 456899999999988767899999999876443 111 0 133567888899999999998864
No 321
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.41 E-value=0.031 Score=51.70 Aligned_cols=151 Identities=8% Similarity=0.087 Sum_probs=89.0
Q ss_pred CCceeeEeeccccHHHHHHHhcC-CCceE-EEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCCcc
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS-SVEKI-DICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTYD 202 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~-~~~~v-~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~fD 202 (319)
.+-+|+||.||.|++...+.+.. +...+ .++|+|+..++..+.+++.. ++.+|..++... .+...+|
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~----------~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE----------VQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC----------CBCCCTTTCCHHHHHHTCCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC----------cccCChhhcCHHHhccCCCC
Confidence 35689999999999999988763 23556 79999999999999988631 445666554221 1123689
Q ss_pred EEEEcCCCCCC------Ccccc------chHHHHHHHHHhc--CCCcEEEEecCCcccChHHHHHHHHHHHhhcCCceeE
Q 020933 203 AVIVDSSDPIG------PAQEL------FEKPFFESVAKAL--RPGGVVSTQAESIWLHMHIIEDIVANCRQIFKGSVNY 268 (319)
Q Consensus 203 vIi~D~~~~~~------~~~~l------~~~~f~~~~~~~L--kpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~v~~ 268 (319)
+|+..++.... ..... .-.++++.+.+.+ +|.-+++=|+.... ....++.+++.+++.= ..+.+
T Consensus 79 il~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~-~~~~~~~i~~~l~~~G-Y~v~~ 156 (327)
T 3qv2_A 79 TWFMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFK-ESLVFKEIYNILIKNQ-YYIKD 156 (327)
T ss_dssp EEEECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGG-GSHHHHHHHHHHHHTT-CEEEE
T ss_pred EEEecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhc-ChHHHHHHHHHHHhCC-CEEEE
Confidence 99987664222 10000 0112333133455 68777766665432 2355677777776541 22333
Q ss_pred eEEe-----ecccCCCeeEEEEcCC
Q 020933 269 AWTT-----VPTYPRTFLPSCSAVN 288 (319)
Q Consensus 269 ~~~~-----vP~~~~g~~~~~S~~~ 288 (319)
.... +|......++++++++
T Consensus 157 ~vl~a~~yGvPQ~R~R~fivg~r~~ 181 (327)
T 3qv2_A 157 IICSPIDIGIPNSRTRYYVMARLTP 181 (327)
T ss_dssp EEECGGGGTCSBCCCEEEEEEESSC
T ss_pred EEEeHHHcCCCccceEEEEEEEeCC
Confidence 2222 4443333448888775
No 322
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.37 E-value=0.0043 Score=58.71 Aligned_cols=108 Identities=10% Similarity=0.071 Sum_probs=65.9
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcCh-HHHHHhC-CCCCc
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG-VAFLKAV-PEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~-~~~l~~~-~~~~f 201 (319)
....+||++|+|. |..+.++++..+..+|++++.+++-++.+++.-. + -+.....|. .+.+... ....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~-~i~~~~~~~~~~~~~~~~~g~g~ 255 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGF-------E-TIDLRNSAPLRDQIDQILGKPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTC-------E-EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-------c-EEcCCCcchHHHHHHHHhCCCCC
Confidence 4567999999876 7778888886555589999999999998876411 0 111111232 3333322 23369
Q ss_pred cEEEEcCCCCCC-C-c--cccchHHHHHHHHHhcCCCcEEEEe
Q 020933 202 DAVIVDSSDPIG-P-A--QELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 202 DvIi~D~~~~~~-~-~--~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|+||-....... . . .++-....++.+.+.|+++|.+++-
T Consensus 256 Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 999843322110 0 0 0000123688889999999998864
No 323
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.34 E-value=0.0069 Score=56.83 Aligned_cols=101 Identities=15% Similarity=0.145 Sum_probs=67.0
Q ss_pred CCCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEE--EcChHHHHHhCCCCC
Q 020933 124 IPNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLH--IGDGVAFLKAVPEGT 200 (319)
Q Consensus 124 ~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~--~~D~~~~l~~~~~~~ 200 (319)
.....+||++|+|. |..+.++++..+..+|+++|.+++-++.+++.=... -+... ..|..+.+++...+.
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-------vi~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNE-------FVNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCE-------EECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcE-------EEccccCchhHHHHHHHhcCCC
Confidence 34568999999864 667777888766568999999999999988642110 00000 123344444332458
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCC-cEEEEec
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~Lkpg-G~lv~~~ 241 (319)
+|+||-... ..+.++.+.+.|++| |.+++-.
T Consensus 264 ~D~vid~~g----------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 264 VDYSFECIG----------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp BSEEEECSC----------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCEEEECCC----------CHHHHHHHHHHhhccCCEEEEEc
Confidence 999984322 235788999999997 9988754
No 324
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.23 E-value=0.0082 Score=50.69 Aligned_cols=99 Identities=12% Similarity=0.071 Sum_probs=60.8
Q ss_pred CCCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCC
Q 020933 124 IPNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGT 200 (319)
Q Consensus 124 ~~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~ 200 (319)
....++||++|+ |.|..+..+++..+ .+|++++.+++..+.+++. . . +..+.....|..+.+.+ .....
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g-----~-~~~~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLSRL-G-----V-EYVGDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHTT-C-----C-SEEEETTCSTHHHHHHHHTTTCC
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-C-----C-CEEeeCCcHHHHHHHHHHhCCCC
Confidence 345679999994 44555566665433 5899999999988777653 1 0 10111111233333322 22346
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|+||.... . +.++.+.+.|+++|.+++-.
T Consensus 108 ~D~vi~~~g----~-------~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 108 VDVVLNSLA----G-------EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEEECCC----T-------HHHHHHHHTEEEEEEEEECS
T ss_pred CeEEEECCc----h-------HHHHHHHHHhccCCEEEEEc
Confidence 999995432 1 45788899999999998753
No 325
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.18 E-value=0.011 Score=54.64 Aligned_cols=97 Identities=14% Similarity=0.170 Sum_probs=66.0
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE--cChHHHHHhC-CCCC
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI--GDGVAFLKAV-PEGT 200 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~--~D~~~~l~~~-~~~~ 200 (319)
....+||++|+|. |..+.++++..+..+|+++|.+++-++.+++.-. + .++. .|..+.+.+. ....
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa-------~---~~i~~~~~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA-------D---AAVKSGAGAADAIRELTGGQG 239 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC-------S---EEEECSTTHHHHHHHHHGGGC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-------C---EEEcCCCcHHHHHHHHhCCCC
Confidence 4567999999865 6677778876545799999999999999987521 1 1111 1333333322 1347
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|+|+-... ....++.+.+.|+++|.+++-.
T Consensus 240 ~d~v~d~~G----------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 240 ATAVFDFVG----------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEEESSC----------CHHHHHHHHHHEEEEEEEEECS
T ss_pred CeEEEECCC----------CHHHHHHHHHHHhcCCEEEEEC
Confidence 999884322 2347889999999999998753
No 326
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.16 E-value=0.021 Score=52.63 Aligned_cols=100 Identities=17% Similarity=0.181 Sum_probs=67.4
Q ss_pred CCCceeeEeecccc-HHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCCcc
Q 020933 125 PNPKKVLVIGGGDG-GVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G~G-~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~fD 202 (319)
....+||++|+|.+ .++..++++....+|++++.+++-++.+++.-... -+.....|..+.+.+. ....+|
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~-------~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADV-------TINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSE-------EEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeE-------EEeCCCCCHHHHhhhhcCCCCce
Confidence 45679999998864 45555666545689999999999989888764321 2233334555544433 234578
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+++.+... ...++...+.|+++|.+++..
T Consensus 235 ~~~~~~~~----------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 235 SAIVCAVA----------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEECCSC----------HHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEeccC----------cchhheeheeecCCceEEEEe
Confidence 87755432 356888999999999988754
No 327
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.08 E-value=0.015 Score=54.32 Aligned_cols=97 Identities=13% Similarity=0.042 Sum_probs=64.8
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE-----cChHHHHHhCCC
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAVPE 198 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~-----~D~~~~l~~~~~ 198 (319)
....+||++|+|. |..+.++++..+..+|++++.+++-++.+++.-.. .++. .|..+.+.+...
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~----------~vi~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT----------ECVNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS----------EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc----------eEecccccchhHHHHHHHHhC
Confidence 4567999999765 66677778876555899999999999988764211 1111 233333433223
Q ss_pred CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCC-cEEEEec
Q 020933 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~Lkpg-G~lv~~~ 241 (319)
+.+|+||-... ..+.++.+.+.|+++ |.+++-.
T Consensus 260 ~g~D~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 260 GGVDFSFEVIG----------RLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SCBSEEEECSC----------CHHHHHHHHHHBCTTTCEEEECS
T ss_pred CCCcEEEECCC----------CHHHHHHHHHHhhcCCcEEEEec
Confidence 47999883322 135688889999999 9988643
No 328
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.07 E-value=0.0077 Score=55.39 Aligned_cols=99 Identities=13% Similarity=0.032 Sum_probs=64.5
Q ss_pred CCCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCc
Q 020933 124 IPNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 124 ~~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
....++||++|+ |.|..+..+++..+ .+|++++.+++-++.+.+.+.. +.-+.....|..+.+.+...+.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKG-CRVVGIAGGAEKCRFLVEELGF------DGAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCC------SEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCC------CEEEECCCHHHHHHHHHhcCCCc
Confidence 346789999997 45667777777655 4899999999988888433321 10011111344444433224579
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|+|+.... .+.++.+.+.|+++|.+++-
T Consensus 220 d~vi~~~g-----------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 220 DVFFDNVG-----------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEEESSC-----------HHHHHHHHTTEEEEEEEEEC
T ss_pred eEEEECCC-----------cchHHHHHHHHhhCCEEEEE
Confidence 99885332 14688899999999999874
No 329
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.06 E-value=0.013 Score=54.86 Aligned_cols=97 Identities=11% Similarity=-0.015 Sum_probs=64.8
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE-----cChHHHHHhCCC
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAVPE 198 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~-----~D~~~~l~~~~~ 198 (319)
....+||++|+|. |..+.++++..+..+|++++.+++-++.+++.-.. .++. .|..+.+.+...
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~----------~vi~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT----------ECLNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCS----------EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc----------EEEecccccchHHHHHHHHhC
Confidence 4567999999764 66677778765555899999999999988864211 1111 233333433223
Q ss_pred CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCC-cEEEEec
Q 020933 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~Lkpg-G~lv~~~ 241 (319)
+.+|+||-... ..+.++.+.+.|+++ |.+++-.
T Consensus 260 gg~Dvvid~~g----------~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 260 GGVDYAVECAG----------RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SCBSEEEECSC----------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CCCCEEEECCC----------CHHHHHHHHHHHhcCCCEEEEEc
Confidence 47999983321 135688899999999 9998653
No 330
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.06 E-value=0.013 Score=54.87 Aligned_cols=97 Identities=13% Similarity=0.090 Sum_probs=64.6
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE-----cChHHHHHhCCC
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAVPE 198 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~-----~D~~~~l~~~~~ 198 (319)
....+||++|+|. |..+.++++..+..+|++++.+++-++.+++.-.. .++. .|..+.+.+...
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~----------~vi~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT----------DFVNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC----------EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc----------eEEeccccchhHHHHHHHHhC
Confidence 4567999999764 66677788876555899999999999988864211 1111 123333332213
Q ss_pred CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCC-cEEEEec
Q 020933 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~Lkpg-G~lv~~~ 241 (319)
+.+|+||-... ..+.++.+.++|+++ |.+++-.
T Consensus 261 ~g~D~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 261 GGVDFSLECVG----------NVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp SCBSEEEECSC----------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCC----------CHHHHHHHHHHhhcCCcEEEEEc
Confidence 47999984322 135688899999999 9988753
No 331
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=96.02 E-value=0.018 Score=53.77 Aligned_cols=97 Identities=13% Similarity=0.147 Sum_probs=64.5
Q ss_pred CCceeeEee-c-cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 126 NPKKVLVIG-G-GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 126 ~~~~VL~IG-~-G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
.+.+||++| + |.|..+.++++.....+|++++.+++-++.+++.-.... ++. ..|..+.+.+...+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~v--i~~------~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHV--IDH------SKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEE--ECT------TSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEE--EeC------CCCHHHHHHHhcCCCceE
Confidence 456899998 3 447778888886334689999999999998887421100 000 123444444443467998
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|+-... ....++.+.++|+++|.+++-
T Consensus 243 vid~~g----------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH----------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC----------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCC----------chhhHHHHHHHhcCCCEEEEE
Confidence 883221 235788999999999999864
No 332
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.01 E-value=0.017 Score=54.61 Aligned_cols=101 Identities=13% Similarity=0.165 Sum_probs=63.8
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCCcc
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~fD 202 (319)
..+.+||++|+|. |..+.++++..+..+|++++.+++-++.+++.-.... +.....|..+.+.+. ....+|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-------i~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHV-------IDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEE-------ECTTTSCHHHHHHHHTTTCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEE-------EcCCCCCHHHHHHHHhCCCCCC
Confidence 4567999999864 6667778887666689999999999999987522110 000012444444332 234799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhc----CCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKAL----RPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~L----kpgG~lv~~~ 241 (319)
+||-.... ....++.+.+.| +++|.+++-.
T Consensus 285 ~vid~~g~---------~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 285 LFLEATGV---------PQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EEEECSSC---------HHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EEEECCCC---------cHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 99833221 112455555566 9999998754
No 333
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.00 E-value=0.0068 Score=54.03 Aligned_cols=46 Identities=13% Similarity=0.102 Sum_probs=40.8
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhcccc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPD 172 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~ 172 (319)
.....|||..||+|.++.++.+.. .+++++|+++..++.+++++..
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHh
Confidence 456799999999999999998874 6899999999999999998764
No 334
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=96.00 E-value=0.02 Score=52.65 Aligned_cols=101 Identities=11% Similarity=0.088 Sum_probs=66.2
Q ss_pred CCCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCCc
Q 020933 124 IPNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTY 201 (319)
Q Consensus 124 ~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~f 201 (319)
...+.+||++|+|. |.++.++++..+...+++++.+++-++.+++.=.. .-+.....|..+..+.. ....+
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~-------~~i~~~~~~~~~~~~~~~~~~g~ 230 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAM-------QTFNSSEMSAPQMQSVLRELRFN 230 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-------EEEETTTSCHHHHHHHHGGGCSS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCe-------EEEeCCCCCHHHHHHhhcccCCc
Confidence 34578999999875 44566678876777889999999999999875211 11111123333333322 13457
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+|+-..- ....++.+.++|+++|.+++..
T Consensus 231 d~v~d~~G----------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 231 QLILETAG----------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEEECSC----------SHHHHHHHHHHCCTTCEEEECC
T ss_pred cccccccc----------ccchhhhhhheecCCeEEEEEe
Confidence 88773321 2357888999999999998754
No 335
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.99 E-value=0.014 Score=54.57 Aligned_cols=97 Identities=11% Similarity=0.038 Sum_probs=64.7
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE-----cChHHHHHhCCC
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAVPE 198 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~-----~D~~~~l~~~~~ 198 (319)
....+||++|+|. |..+.++++..+..+|++++.+++-++.+++.-.. .++. .|..+.+.+...
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~----------~vi~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT----------DCLNPRELDKPVQDVITELTA 263 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS----------EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc----------EEEccccccchHHHHHHHHhC
Confidence 4567999999764 66677788876655899999999999988764211 1111 233333332213
Q ss_pred CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCC-cEEEEec
Q 020933 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~Lkpg-G~lv~~~ 241 (319)
+.+|+||-... ..+.++.+.+.|+++ |.+++-.
T Consensus 264 ~g~Dvvid~~G----------~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 264 GGVDYSLDCAG----------TAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SCBSEEEESSC----------CHHHHHHHHHTBCTTTCEEEECC
T ss_pred CCccEEEECCC----------CHHHHHHHHHHhhcCCCEEEEEC
Confidence 47999883322 135688899999999 9998653
No 336
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.94 E-value=0.021 Score=52.93 Aligned_cols=99 Identities=16% Similarity=0.111 Sum_probs=63.4
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE-cChHHHHHh-CC---C
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-GDGVAFLKA-VP---E 198 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~-~D~~~~l~~-~~---~ 198 (319)
....+||++|+|. |..+.++++..+. +|++++.+++-++.+++.-. +.-+.... .|..+-+.. .. .
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGA-------DVTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTC-------SEEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCC-------CEEEcCcccccHHHHHHHHhccccC
Confidence 4568999999764 6667777876554 59999999999998886421 10011110 232333322 11 2
Q ss_pred CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
..+|+||-... ....++.+.+.|+++|.+++-.
T Consensus 239 ~g~D~vid~~g----------~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 239 DLPNVTIDCSG----------NEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SCCSEEEECSC----------CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEEECCC----------CHHHHHHHHHHHhcCCEEEEEe
Confidence 46999984332 1246788899999999998753
No 337
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.92 E-value=0.015 Score=54.22 Aligned_cols=97 Identities=16% Similarity=0.095 Sum_probs=64.6
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE-----cChHHHHHhCCC
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-----GDGVAFLKAVPE 198 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~-----~D~~~~l~~~~~ 198 (319)
....+||++|+|. |..+.++++..+..+|++++.+++-++.+++.-.. .++. .|..+.+.+...
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~----------~vi~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT----------ECINPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS----------EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc----------eEeccccccccHHHHHHHHhC
Confidence 4567999999764 56677777765555899999999999988864211 1111 233333433223
Q ss_pred CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCC-cEEEEec
Q 020933 199 GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQA 241 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~Lkpg-G~lv~~~ 241 (319)
+.+|+||-... ..+.++.+.+.|+++ |.+++-.
T Consensus 259 ~g~D~vid~~g----------~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 259 GGVDYSFECIG----------NVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp SCBSEEEECSC----------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCC----------cHHHHHHHHHhhccCCcEEEEEe
Confidence 47999884322 135688899999999 9998753
No 338
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.89 E-value=0.024 Score=52.62 Aligned_cols=94 Identities=15% Similarity=0.133 Sum_probs=62.2
Q ss_pred ceeeEeeccc-cHHH-HHHH-hcCCCceEEEEECChH---HHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCc
Q 020933 128 KKVLVIGGGD-GGVL-REVS-RHSSVEKIDICEIDKM---VVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 128 ~~VL~IG~G~-G~~~-~~l~-~~~~~~~v~~VEid~~---vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
.+||++|+|. |..+ .+++ +..+..+|++++.+++ -++.+++.-.. .+.....|..+ +.+. .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~--------~v~~~~~~~~~-i~~~-~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT--------YVDSRQTPVED-VPDV-YEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCE--------EEETTTSCGGG-HHHH-SCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCc--------ccCCCccCHHH-HHHh-CCCC
Confidence 7999999754 6667 7888 8766555999999988 78888764211 11001123344 4333 3479
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||-... ....++.+.+.|+++|.+++-.
T Consensus 244 Dvvid~~g----------~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 244 DFIYEATG----------FPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEEEECSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred CEEEECCC----------ChHHHHHHHHHHhcCCEEEEEe
Confidence 99883322 2246888999999999998753
No 339
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.86 E-value=0.038 Score=51.62 Aligned_cols=95 Identities=15% Similarity=0.189 Sum_probs=63.0
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
....+||++|+|. |..+.++++..+ .+|++++.+++-++.+++. .. + .++...-.++++.. .+.+|+
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~G-a~Vi~~~~~~~~~~~a~~l-Ga------~---~vi~~~~~~~~~~~-~~g~Dv 260 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVAFTTSEAKREAAKAL-GA------D---EVVNSRNADEMAAH-LKSFDF 260 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHH-TC------S---EEEETTCHHHHHTT-TTCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------c---EEeccccHHHHHHh-hcCCCE
Confidence 4568999999875 667777888755 4699999999988988863 21 1 12222222344433 357999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
||-....+ ..++.+.+.|+++|.++.-.
T Consensus 261 vid~~g~~----------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 261 ILNTVAAP----------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EEECCSSC----------CCHHHHHTTEEEEEEEEECC
T ss_pred EEECCCCH----------HHHHHHHHHhccCCEEEEec
Confidence 88433221 13677888999999988643
No 340
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.85 E-value=0.016 Score=54.61 Aligned_cols=109 Identities=15% Similarity=0.114 Sum_probs=66.5
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcC-hHHHHHhC-CCCCc
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGD-GVAFLKAV-PEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D-~~~~l~~~-~~~~f 201 (319)
....+||++|+|. |..+.++++..+..+|+++|.+++-++.+++.-. + -+.....| ..+.+... ....+
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa-------~-~i~~~~~~~~~~~v~~~t~g~g~ 255 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF-------E-IADLSLDTPLHEQIAALLGEPEV 255 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-------E-EEETTSSSCHHHHHHHHHSSSCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC-------c-EEccCCcchHHHHHHHHhCCCCC
Confidence 4567999999765 6777888887665689999999999999976411 0 01110112 23333322 23479
Q ss_pred cEEEEcCCCCC-CC----ccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPI-GP----AQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~-~~----~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||-....+. .. ..+......++.+.++|+++|.+++-.
T Consensus 256 Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 256 DCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 99984332211 00 000011246888999999999998643
No 341
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.79 E-value=0.13 Score=50.11 Aligned_cols=126 Identities=15% Similarity=0.034 Sum_probs=82.7
Q ss_pred CceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC----------
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV---------- 196 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~---------- 196 (319)
.-+++||-||.|++...+.+. +..-|.++|+|+...+.-+.++.. .+...++.+|+.++....
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~~~------~p~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANHYC------DPATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHSCC------CTTTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhccc------CCCcceeccchhhhhhccccccchhhHH
Confidence 458999999999999998776 345689999999999999988742 245567889998875210
Q ss_pred -----CCCCccEEEEcCCCCC-CCcc------------------ccchHHHHHHHHHhcCCCcEEEEecCCcccC--hHH
Q 020933 197 -----PEGTYDAVIVDSSDPI-GPAQ------------------ELFEKPFFESVAKALRPGGVVSTQAESIWLH--MHI 250 (319)
Q Consensus 197 -----~~~~fDvIi~D~~~~~-~~~~------------------~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~--~~~ 250 (319)
....+|+|+..++... +.+. .-...++++. .+.++|.-+++=|+.....+ ...
T Consensus 161 ~~i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~ri-I~~~rPk~fvlENV~gl~s~~~g~~ 239 (482)
T 3me5_A 161 EHIRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRI-IDARRPAMFVLENVKNLKSHDKGKT 239 (482)
T ss_dssp HHHHHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHH-HHHHCCSEEEEEEETTTTTGGGGHH
T ss_pred hhhhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHH-HHHcCCcEEEEeCcHHHhcccCCcH
Confidence 0246899998665421 1110 0112233333 44678987777677554332 346
Q ss_pred HHHHHHHHHh
Q 020933 251 IEDIVANCRQ 260 (319)
Q Consensus 251 ~~~~~~~l~~ 260 (319)
+..+++.+.+
T Consensus 240 f~~i~~~L~~ 249 (482)
T 3me5_A 240 FRIIMQTLDE 249 (482)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 6777777765
No 342
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=95.74 E-value=0.016 Score=53.09 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=62.2
Q ss_pred CCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE-cChHHHHHhCCCCCc
Q 020933 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-GDGVAFLKAVPEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~-~D~~~~l~~~~~~~f 201 (319)
...++||+.|+ |.|..+..+++..+ .+|++++.+++-++.+++. .. +..+.... .|..+.+.....+.+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSDEKIAYLKQI-GF------DAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------SEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------cEEEecCCHHHHHHHHHHHhCCCC
Confidence 45679999997 45666666666544 4899999999888888543 21 10011111 233344433223579
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||..... +.++.+.+.|+++|.+++-.
T Consensus 216 d~vi~~~g~-----------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVGG-----------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSCH-----------HHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh-----------HHHHHHHHHHhcCCEEEEEe
Confidence 999855421 34788889999999998653
No 343
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.70 E-value=0.015 Score=54.65 Aligned_cols=97 Identities=15% Similarity=0.139 Sum_probs=63.5
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEc------ChHHHHHhC-
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG------DGVAFLKAV- 196 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~------D~~~~l~~~- 196 (319)
....+||++|+|. |..+.++++..+..+|++++.+++-++.+++.-. + .++.. |..+.+.+.
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 194 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA-------D---LTLNRRETSVEERRKAIMDIT 263 (380)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC-------S---EEEETTTSCHHHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC-------c---EEEeccccCcchHHHHHHHHh
Confidence 4567999999653 6667778887654689999999999998886411 1 12222 222233322
Q ss_pred CCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 197 PEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 197 ~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
....+|+||-.... .+.++.+.+.|+++|.+++-.
T Consensus 264 ~g~g~Dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 264 HGRGADFILEATGD----------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp TTSCEEEEEECSSC----------TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCCCcEEEECCCC----------HHHHHHHHHHHhcCCEEEEEe
Confidence 23369999843321 135788889999999998653
No 344
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.63 E-value=0.038 Score=51.39 Aligned_cols=95 Identities=16% Similarity=0.128 Sum_probs=63.4
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE---cChHHHHHhC-CCC
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI---GDGVAFLKAV-PEG 199 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~---~D~~~~l~~~-~~~ 199 (319)
..+.+||++|+|. |..+.++++..+ .+|++++.+++-++.+++.-. + .++. .|..+.+... ...
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATG-AEVIVTSSSREKLDRAFALGA-------D---HGINRLEEDWVERVYALTGDR 256 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTC-------S---EEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEecCchhHHHHHHcCC-------C---EEEcCCcccHHHHHHHHhCCC
Confidence 4568999999765 666777788765 489999999999998887421 1 1222 2333333322 234
Q ss_pred CccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 200 ~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.+|+|+-... . +.++.+.+.|+++|.+++-.
T Consensus 257 g~D~vid~~g-~----------~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILEIAG-G----------AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp CEEEEEEETT-S----------SCHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEECCC-h----------HHHHHHHHHhhcCCEEEEEe
Confidence 7999884432 1 13677888999999998753
No 345
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=95.59 E-value=0.025 Score=52.68 Aligned_cols=98 Identities=19% Similarity=0.159 Sum_probs=64.4
Q ss_pred CCCceeeEee--ccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
..+++||++| +|.|..+..+++..+ .+|++++.+++-++.+++. .. +.-+.....|..+.+.......+|
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~-Ga------~~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCSSDEKSAFLKSL-GC------DRPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-TC------SEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHc-CC------cEEEecCChhHHHHHHHhcCCCCC
Confidence 4568999999 566778888888755 4899999999988888863 21 100000012333334332235799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+||..... ..++.+.+.|+++|.+++-.
T Consensus 234 ~vid~~g~-----------~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 234 VVYESVGG-----------AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEEECSCT-----------HHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCCH-----------HHHHHHHHHHhcCCEEEEEe
Confidence 99844321 36788899999999988753
No 346
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.54 E-value=0.018 Score=53.31 Aligned_cols=99 Identities=21% Similarity=0.200 Sum_probs=64.0
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCCccE
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTYDA 203 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~fDv 203 (319)
...+||++|+|. |..+..+++..+..+|++++.+++-++.+++.-... -+.....|..+.+.+. ....+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~-------~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY-------VINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE-------EECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE-------EECCCCcCHHHHHHHHcCCCCCCE
Confidence 567999999854 666677777655448999999999988887642110 0000012333334332 2346999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
||.... ..+.++.+.+.|+++|.++.-.
T Consensus 240 vid~~g----------~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 240 FLEFSG----------APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEECSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC----------CHHHHHHHHHHHhcCCEEEEEc
Confidence 984332 1356888899999999988653
No 347
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.49 E-value=0.019 Score=52.91 Aligned_cols=98 Identities=16% Similarity=0.106 Sum_probs=63.6
Q ss_pred CCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE-cChHHHHHhCCCCCc
Q 020933 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-GDGVAFLKAVPEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~-~D~~~~l~~~~~~~f 201 (319)
...++||++|+ |.|..+..+++..+ .+|++++.+++-++.+++.+.. +.-+.... .|..+.+.....+.+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~~g~------~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGSKEKVDLLKTKFGF------DDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTSCC------SEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHcCC------ceEEecCCHHHHHHHHHHHhCCCC
Confidence 45689999996 55667777777655 5899999999988888743321 10011000 133344433223579
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|+||.... . +.++.+.+.|+++|.+++-
T Consensus 227 d~vi~~~g----------~-~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 227 DIYFENVG----------G-KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp EEEEESSC----------H-HHHHHHHTTEEEEEEEEEC
T ss_pred cEEEECCC----------H-HHHHHHHHHHhcCCEEEEE
Confidence 99985432 1 3688889999999999864
No 348
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.45 E-value=0.041 Score=50.76 Aligned_cols=91 Identities=13% Similarity=0.074 Sum_probs=62.6
Q ss_pred CCCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 124 IPNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 124 ~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
...+.+||++|+|. |..+.++++..+ .+|++++.+++-.+.+++. .. + .++ .|.. .+ .+.+|
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~l-Ga------~---~v~-~~~~-~~----~~~~D 236 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMG-AEVSVFARNEHKKQDALSM-GV------K---HFY-TDPK-QC----KEELD 236 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTT-CEEEEECSSSTTHHHHHHT-TC------S---EEE-SSGG-GC----CSCEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHhc-CC------C---eec-CCHH-HH----hcCCC
Confidence 34678999999865 667777888765 4899999999999988873 21 1 122 3422 22 23799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|+-....+ ..++.+.+.|+++|.+++-.
T Consensus 237 ~vid~~g~~----------~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 237 FIISTIPTH----------YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EEEECCCSC----------CCHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCcH----------HHHHHHHHHHhcCCEEEEEC
Confidence 998433221 13778889999999998754
No 349
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.44 E-value=0.009 Score=55.17 Aligned_cols=98 Identities=20% Similarity=0.237 Sum_probs=63.1
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.+.+||++|+|. |..+..+++..+..+|++++.+++-++.+++. ........ ..|..+.+.+.....+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~-------~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPL-------EEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTT-------TSCHHHHHHHHHSSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcC-------ccCHHHHHHHhcCCCCCEE
Confidence 567999999754 66677777765544899999999888877764 22100011 1233333332113469999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|-... ..+.++.+.+.|+++|.+++-.
T Consensus 236 id~~g----------~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 236 LEFSG----------NEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp EECSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EECCC----------CHHHHHHHHHHHhcCCEEEEEe
Confidence 84332 1356888999999999988653
No 350
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=95.33 E-value=0.021 Score=52.66 Aligned_cols=99 Identities=14% Similarity=0.053 Sum_probs=62.1
Q ss_pred CCCCceeeEeecc--ccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCC
Q 020933 124 IPNPKKVLVIGGG--DGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGT 200 (319)
Q Consensus 124 ~~~~~~VL~IG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~ 200 (319)
...+++||++|+| .|..+..+++..+ .+|++++.+++-++.+++.-... -+.....|..+.+.+ .....
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lga~~-------~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNNKHTEELLRLGAAY-------VIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTTSC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhCCCcE-------EEeCCcccHHHHHHHHhCCCC
Confidence 3457899999986 5667777777654 48999999999888888742110 111111233333332 22347
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|+||..... .. .....+.|+++|.+++-.
T Consensus 214 ~Dvvid~~g~----------~~-~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 214 ADAAIDSIGG----------PD-GNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEEESSCH----------HH-HHHHHHTEEEEEEEEECC
T ss_pred CcEEEECCCC----------hh-HHHHHHHhcCCCEEEEEe
Confidence 9998843321 12 334458999999998754
No 351
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=95.32 E-value=0.096 Score=48.86 Aligned_cols=101 Identities=25% Similarity=0.345 Sum_probs=58.8
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.+++||++|+|. |..+..+++..+. +|+++|.+++-++.+++.+.. .+..+..+..++.+.. ..+|+|
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~DvV 234 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS--------RVELLYSNSAEIETAV--AEADLL 234 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG--------GSEEEECCHHHHHHHH--HTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc--------eeEeeeCCHHHHHHHH--cCCCEE
Confidence 358999999853 3333444555454 899999999988877765432 2233333322222211 358999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|.....+......+.. +...+.|++||+++.-+
T Consensus 235 I~~~~~~~~~~~~li~----~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 235 IGAVLVPGRRAPILVP----ASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp EECCCCTTSSCCCCBC----HHHHTTSCTTCEEEETT
T ss_pred EECCCcCCCCCCeecC----HHHHhhCCCCCEEEEEe
Confidence 8654433322223333 34556789999887543
No 352
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=95.32 E-value=0.02 Score=52.60 Aligned_cols=97 Identities=15% Similarity=0.145 Sum_probs=63.3
Q ss_pred CCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCCc
Q 020933 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~f 201 (319)
...++||++|+ |.|..+..+++..+ .+|++++.+++-++.+++.-... -+.....|..+.+.+. ....+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga~~-------~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLKIAKEYGAEY-------LINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTCSE-------EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCcE-------EEeCCCchHHHHHHHHhCCCCc
Confidence 45689999993 45667777787755 48999999999999887742110 0111113434434332 23579
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|+|+..... +.++.+.+.|+++|.+++-
T Consensus 219 D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 219 DASFDSVGK-----------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EEEEECCGG-----------GGHHHHHHHEEEEEEEEEC
T ss_pred eEEEECCCh-----------HHHHHHHHHhccCCEEEEE
Confidence 998843321 2477888999999999875
No 353
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.27 E-value=0.027 Score=51.97 Aligned_cols=97 Identities=16% Similarity=0.207 Sum_probs=63.8
Q ss_pred CCCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCC
Q 020933 124 IPNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGT 200 (319)
Q Consensus 124 ~~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~ 200 (319)
....++||++|+ |.|..+..+++..+ .+|++++.+++-++.+++.-. +.-+... .|..+.+... ....
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-------~~v~~~~-~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRTAATEFVKSVGA-------DIVLPLE-EGWAKAVREATGGAG 227 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHHHTC-------SEEEESS-TTHHHHHHHHTTTSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCC-------cEEecCc-hhHHHHHHHHhCCCC
Confidence 345789999996 45777778888765 489999999998888887421 1111111 3444444332 2347
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+|+|+-.... +.++.+.+.|+++|.+++-
T Consensus 228 ~Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 228 VDMVVDPIGG-----------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEEEESCC-------------CHHHHHHTEEEEEEEEEC
T ss_pred ceEEEECCch-----------hHHHHHHHhhcCCCEEEEE
Confidence 9999854332 2367888999999999864
No 354
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=95.26 E-value=1.1 Score=47.42 Aligned_cols=153 Identities=12% Similarity=0.088 Sum_probs=93.5
Q ss_pred CceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-----------
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA----------- 195 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~----------- 195 (319)
.-+++||-||.|++...+.+..-...+.++|+|+..++..+.+++ ...++.+|+.+++..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~~di~~~~~ 610 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP---------GSTVFTEDCNILLKLVMAGETTNSRG 610 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHHHTCSBCTTC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---------CCccccccHHHHhhhccchhhhhhhh
Confidence 458999999999999998776311467899999999999888875 346778887665321
Q ss_pred --CC-CCCccEEEEcCCCC-CCCccc-----------cchHHHHHHHHHhcCCCcEEEEecCCccc--ChHHHHHHHHHH
Q 020933 196 --VP-EGTYDAVIVDSSDP-IGPAQE-----------LFEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVANC 258 (319)
Q Consensus 196 --~~-~~~fDvIi~D~~~~-~~~~~~-----------l~~~~f~~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~~~~~l 258 (319)
.+ .+.+|+|+..++.. ...... -...+|++ +.+.++|.-+++=|+..... ....+..+++.+
T Consensus 611 ~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~r-iv~~~rPk~~llENV~glls~~~~~~~~~i~~~L 689 (1002)
T 3swr_A 611 QRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLS-YCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCL 689 (1002)
T ss_dssp CBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHH-HHHHHCCSEEEEEEEGGGGTTGGGHHHHHHHHHH
T ss_pred hhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHH-HHHHhCCCEEEEeccHHHhccCcchHHHHHHHHH
Confidence 11 24689999766542 221111 01123444 44567998888777654332 234566777776
Q ss_pred HhhcCCceeEeEEe-----ecccCCCeeEEEEcCCCC
Q 020933 259 RQIFKGSVNYAWTT-----VPTYPRTFLPSCSAVNSD 290 (319)
Q Consensus 259 ~~~F~~~v~~~~~~-----vP~~~~g~~~~~S~~~~~ 290 (319)
.+.= ..+.+.... +|......++++++.+..
T Consensus 690 ~~lG-Y~v~~~vLnA~dyGvPQ~R~R~fiva~r~g~~ 725 (1002)
T 3swr_A 690 VRMG-YQCTFGVLQAGQYGVAQTRRRAIILAAAPGEK 725 (1002)
T ss_dssp HHHT-CEEEEEEEEGGGGTCSBCCEEEEEEEECTTSC
T ss_pred HhcC-CeEEEEEEEHHHCCCCccceEEEEEEEeCCCC
Confidence 6541 234433333 333322344888876543
No 355
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.23 E-value=0.039 Score=50.94 Aligned_cols=96 Identities=14% Similarity=0.259 Sum_probs=63.0
Q ss_pred CCceeeEee-c-cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 126 NPKKVLVIG-G-GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 126 ~~~~VL~IG-~-G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
...+||++| + |.|..+.++++..+ .+|++++.+++-++.+++.-.... ++. ..|..+.+.+...+.+|+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~lGa~~v--i~~------~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG-LRVITTASRNETIEWTKKMGADIV--LNH------KESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEECCSHHHHHHHHHHTCSEE--ECT------TSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCCcEE--EEC------CccHHHHHHHhCCCCccE
Confidence 567999995 3 34667777888765 489999999999999887421110 000 023333343332457999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|+-... ....++.+.++|+++|.++..
T Consensus 221 v~d~~g----------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 221 VFCTFN----------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEESSC----------HHHHHHHHHHHEEEEEEEEES
T ss_pred EEECCC----------chHHHHHHHHHhccCCEEEEE
Confidence 884321 235688999999999999764
No 356
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.22 E-value=0.029 Score=51.97 Aligned_cols=99 Identities=9% Similarity=0.026 Sum_probs=62.3
Q ss_pred CCC--ceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCC
Q 020933 125 PNP--KKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGT 200 (319)
Q Consensus 125 ~~~--~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~ 200 (319)
... ++||+.|+ |.|..+..+++..+..+|++++.+++-++.+++.+.. +.-+.....|..+.+.....+.
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~------~~~~d~~~~~~~~~~~~~~~~~ 230 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF------DAAINYKKDNVAEQLRESCPAG 230 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC------SEEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC------ceEEecCchHHHHHHHHhcCCC
Confidence 345 89999996 4455666667665544899999999888887764321 1001111123333333221337
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+|+||.... .+.++.+.++|+++|.+++-
T Consensus 231 ~d~vi~~~G-----------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 231 VDVYFDNVG-----------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp EEEEEESCC-----------HHHHHHHHHTEEEEEEEEEC
T ss_pred CCEEEECCC-----------HHHHHHHHHHhccCcEEEEE
Confidence 999985432 14678889999999999864
No 357
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.17 E-value=0.037 Score=51.04 Aligned_cols=95 Identities=13% Similarity=-0.002 Sum_probs=61.8
Q ss_pred CCceeeEeeccc-cHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcCh-HHHHHhC-CCCC
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG-VAFLKAV-PEGT 200 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~-~~~l~~~-~~~~ 200 (319)
...+||++|+|. |..+.++++.. + .+|++++.+++-++.+++.-. + .++..+- .+++... ....
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKN-ITIVGISRSKKHRDFALELGA-------D---YVSEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTT-CEEEEECSCHHHHHHHHHHTC-------S---EEECHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCC-CEEEEEeCCHHHHHHHHHhCC-------C---EEeccccchHHHHHhhcCCC
Confidence 567999999864 56677777764 4 579999999999998887411 1 1121111 1222221 1347
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|+||-... ....++.+.+.|+++|.++.-.
T Consensus 239 ~D~vid~~g----------~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 239 ASIAIDLVG----------TEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEEESSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred ccEEEECCC----------ChHHHHHHHHHhhcCCEEEEeC
Confidence 999984332 1246888999999999988643
No 358
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.13 E-value=0.031 Score=51.46 Aligned_cols=98 Identities=22% Similarity=0.314 Sum_probs=63.0
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
...++||++|+|. |..+..+++..+ .+|++++.+++-++.+++.-... -+.....|..+.+.+.. +.+|+
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lGa~~-------~~d~~~~~~~~~~~~~~-~~~d~ 233 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMG-LNVVAVDIGDEKLELAKELGADL-------VVNPLKEDAAKFMKEKV-GGVHA 233 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHTTCSE-------EECTTTSCHHHHHHHHH-SSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHCCCCE-------EecCCCccHHHHHHHHh-CCCCE
Confidence 4567999999853 666777777655 48999999999999887631110 00000123333333221 47999
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
||.... ....++.+.+.|+++|.++.-.
T Consensus 234 vid~~g----------~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 234 AVVTAV----------SKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EEESSC----------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCC----------CHHHHHHHHHHhhcCCEEEEec
Confidence 984432 1246788899999999988653
No 359
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.08 E-value=0.028 Score=51.91 Aligned_cols=99 Identities=13% Similarity=0.104 Sum_probs=62.8
Q ss_pred CCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEE-EcChHHHHHhCCCCCc
Q 020933 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLH-IGDGVAFLKAVPEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~-~~D~~~~l~~~~~~~f 201 (319)
...++||++|+ |.|..+..+++..+ .+|++++.+++-++.+++. .. +.-+.+. ..|..+.+.....+.+
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~~-g~------~~~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRSI-GG------EVFIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHHT-TC------CEEEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHHc-CC------ceEEecCccHhHHHHHHHHhCCCC
Confidence 45679999998 45666666776554 5899999998888887763 11 1001100 1233333432212379
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||.... ..+.++.+.+.|+++|.++.-.
T Consensus 240 D~vi~~~g----------~~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 240 HGVINVSV----------SEAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEEEECSS----------CHHHHHHHTTSEEEEEEEEECC
T ss_pred CEEEECCC----------cHHHHHHHHHHHhcCCEEEEEe
Confidence 99985442 1256888999999999988653
No 360
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.06 E-value=0.021 Score=52.27 Aligned_cols=98 Identities=11% Similarity=0.036 Sum_probs=63.6
Q ss_pred CCCceeeEee--ccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCCc
Q 020933 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~f 201 (319)
...++||++| +|.|..+..+++..+ .+|++++.+++-++.+++.-... -+.....|..+.+.+ .....+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~Ga~~-------~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSPEKAAHAKALGAWE-------TIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCCE-------EEeCCCccHHHHHHHHhCCCCc
Confidence 4568999999 345777777777654 48999999999999888642110 111111233333333 223579
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+|+..... +.++.+.+.|+++|.+++-.
T Consensus 211 Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQ-----------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCG-----------GGHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh-----------HHHHHHHHHhcCCCEEEEEe
Confidence 998843321 24778889999999998754
No 361
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.90 E-value=0.14 Score=48.17 Aligned_cols=100 Identities=22% Similarity=0.289 Sum_probs=57.2
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.+++|+++|+|. |..+...++..+. +|+++|.+++-++.+++.+.. .+.....+...+.+.. ...|+|
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~--------~~~~~~~~~~~l~~~l--~~aDvV 235 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCG--------RIHTRYSSAYELEGAV--KRADLV 235 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTT--------SSEEEECCHHHHHHHH--HHCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCC--------eeEeccCCHHHHHHHH--cCCCEE
Confidence 467999999854 3333334444444 899999999988877765431 1222222222221111 357999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|.....+......+... ...+.|||||+++.-
T Consensus 236 i~~~~~p~~~t~~li~~----~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 236 IGAVLVPGAKAPKLVSN----SLVAHMKPGAVLVDI 267 (377)
T ss_dssp EECCCCTTSCCCCCBCH----HHHTTSCTTCEEEEG
T ss_pred EECCCcCCCCCcceecH----HHHhcCCCCcEEEEE
Confidence 97543333222334333 455678999988754
No 362
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.87 E-value=0.12 Score=41.05 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=60.5
Q ss_pred CceeeEeeccc-cHH-HHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH--HHHhCCCCCcc
Q 020933 127 PKKVLVIGGGD-GGV-LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTYD 202 (319)
Q Consensus 127 ~~~VL~IG~G~-G~~-~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~--~l~~~~~~~fD 202 (319)
..+|+++|+|. |.. +..|.+. ..+|+++|.|++.++.+++. .+.++.+|+.+ .+....-..+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~~-----------g~~~i~gd~~~~~~l~~a~i~~ad 73 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRER-----------GVRAVLGNAANEEIMQLAHLECAK 73 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT-----------TCEEEESCTTSHHHHHHTTGGGCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHc-----------CCCEEECCCCCHHHHHhcCcccCC
Confidence 35899999975 332 2333333 25799999999988877642 45778888753 45543235789
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+||+-..+.. .....-...+.+.|+..++....
T Consensus 74 ~vi~~~~~~~-------~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 74 WLILTIPNGY-------EAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp EEEECCSCHH-------HHHHHHHHHHHHCSSSEEEEEES
T ss_pred EEEEECCChH-------HHHHHHHHHHHHCCCCeEEEEEC
Confidence 9986554321 11223345666788888776543
No 363
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.84 E-value=0.082 Score=48.97 Aligned_cols=95 Identities=15% Similarity=0.133 Sum_probs=60.1
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
...+||++|+|. |..+.++++..+ .+|++++.+++-++.+++.+.. + . ++..+-.+.+.+. .+.+|+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~G-a~Vi~~~~~~~~~~~~~~~lGa------~-~--vi~~~~~~~~~~~-~~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMG-HHVTVISSSNKKREEALQDLGA------D-D--YVIGSDQAKMSEL-ADSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSTTHHHHHHTTSCC------S-C--EEETTCHHHHHHS-TTTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHcCC------c-e--eeccccHHHHHHh-cCCCCEE
Confidence 567999999753 555666777654 4899999999888888744431 1 1 1211112344443 3479998
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|-....+ ..++...+.|+++|.++.-.
T Consensus 249 id~~g~~----------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 249 IDTVPVH----------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EECCCSC----------CCSHHHHTTEEEEEEEEECS
T ss_pred EECCCCh----------HHHHHHHHHhccCCEEEEeC
Confidence 8433221 12456778999999998753
No 364
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.81 E-value=0.028 Score=52.11 Aligned_cols=99 Identities=18% Similarity=0.212 Sum_probs=63.1
Q ss_pred CCCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCc
Q 020933 124 IPNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 124 ~~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
....++||++|+ |.|..+..+++..+ .+|++++.+++-++.+++.-... -+.....|..+.+.......+
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~lGa~~-------~~~~~~~~~~~~~~~~~~~g~ 236 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGSTGKCEACERLGAKR-------GINYRSEDFAAVIKAETGQGV 236 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHHSSCE
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCCCE-------EEeCCchHHHHHHHHHhCCCc
Confidence 345689999963 45667777787755 48999999999999888742110 011111233333332214579
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||..... +.++.+.+.|+++|.+++-.
T Consensus 237 Dvvid~~g~-----------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 237 DIILDMIGA-----------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEEESCCG-----------GGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCCH-----------HHHHHHHHHhccCCEEEEEE
Confidence 998854321 24677889999999988653
No 365
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=94.80 E-value=0.14 Score=47.64 Aligned_cols=95 Identities=17% Similarity=0.205 Sum_probs=59.8
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
...+||++|+|. |..+.++++..+ .+|++++.+++-++.+++.+.. + .++..+-.+.+.+. .+.+|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~Vi~~~~~~~~~~~~~~~lGa------~---~v~~~~~~~~~~~~-~~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGA------D---SFLVSRDQEQMQAA-AGTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHTSCC------S---EEEETTCHHHHHHT-TTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcCC------c---eEEeccCHHHHHHh-hCCCCEE
Confidence 567999999754 555666777655 4899999999888877744431 1 12221112344443 3579999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|.....+. .++.+.+.|+++|.++.-.
T Consensus 256 id~~g~~~----------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 256 IDTVSAVH----------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EECCSSCC----------CSHHHHHHEEEEEEEEECC
T ss_pred EECCCcHH----------HHHHHHHHHhcCCEEEEEc
Confidence 85433211 2456677899999988643
No 366
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.66 E-value=0.048 Score=50.18 Aligned_cols=98 Identities=17% Similarity=0.181 Sum_probs=62.6
Q ss_pred CCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCCc
Q 020933 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~f 201 (319)
...++||++|+ |.|..+..+++..+ .+|++++.+++-++.+++. .. +.-+.....|..+.+.+. ....+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~-ga------~~~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSEDKLRRAKAL-GA------DETVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------CEEEcCCcccHHHHHHHHhCCCCc
Confidence 45679999997 56777777777655 4899999999998888763 11 100111012323333322 23479
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||.... . +.++.+.+.|+++|.++.-.
T Consensus 237 d~vi~~~g-~----------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 237 DKVVDHTG-A----------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEEEESSC-S----------SSHHHHHHHEEEEEEEEESS
T ss_pred eEEEECCC-H----------HHHHHHHHhhccCCEEEEEe
Confidence 99985443 1 13677888999999988653
No 367
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=94.59 E-value=0.038 Score=51.00 Aligned_cols=100 Identities=21% Similarity=0.253 Sum_probs=62.1
Q ss_pred CCCCceeeEeecc--ccHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCC-C
Q 020933 124 IPNPKKVLVIGGG--DGGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE-G 199 (319)
Q Consensus 124 ~~~~~~VL~IG~G--~G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~-~ 199 (319)
....++||++|+| .|..+..+++.. + .+|++++.+++-++.+++.-. +.-+.....|..+.+..... +
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAKRAGA-------DYVINASMQDPLAEIRRITESK 239 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHHhCC-------CEEecCCCccHHHHHHHHhcCC
Confidence 3456899999987 444556666654 4 579999999998888876311 10000001232222332222 5
Q ss_pred CccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 200 TYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 200 ~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.+|+||..... ...++.+.+.|+++|.+++-.
T Consensus 240 ~~d~vi~~~g~----------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 240 GVDAVIDLNNS----------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp CEEEEEESCCC----------HHHHTTGGGGEEEEEEEEECC
T ss_pred CceEEEECCCC----------HHHHHHHHHHHhcCCEEEEEC
Confidence 79999854321 246788889999999998743
No 368
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=94.50 E-value=0.056 Score=49.49 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=61.9
Q ss_pred CCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCCc
Q 020933 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~f 201 (319)
...++||++|+ |.|..+..+++..+ .+|++++.+++-++.+++.-. +.-+.....|..+.+.+. ....+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~~g~-------~~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTEEKAETARKLGC-------HHTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCC-------CEEEECCCHHHHHHHHHHhCCCCC
Confidence 45689999994 56777777777654 589999999988888876311 100110012323323221 13469
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||..... +.++.+.++|+++|.+++-.
T Consensus 216 d~vi~~~g~-----------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 216 DVVYDSIGK-----------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEECSCT-----------TTHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCcH-----------HHHHHHHHhhccCCEEEEEe
Confidence 999854322 24778889999999988653
No 369
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.47 E-value=0.07 Score=49.17 Aligned_cols=95 Identities=15% Similarity=0.227 Sum_probs=62.3
Q ss_pred CCCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCC
Q 020933 124 IPNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGT 200 (319)
Q Consensus 124 ~~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~ 200 (319)
...+++||++|+ |.|..+..+++..+ .+|+++ .+++-++.+++.-. +. +. ...|..+.+... ....
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~G-a~Vi~~-~~~~~~~~~~~lGa-------~~-i~-~~~~~~~~~~~~~~~~g 216 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARG-ARVFAT-ARGSDLEYVRDLGA-------TP-ID-ASREPEDYAAEHTAGQG 216 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEE-ECHHHHHHHHHHTS-------EE-EE-TTSCHHHHHHHHHTTSC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEE-eCHHHHHHHHHcCC-------CE-ec-cCCCHHHHHHHHhcCCC
Confidence 345689999993 45777778888765 489999 88888888876421 11 22 122333333322 2357
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+|+|+-.... +.++.+.+.|+++|.+++-
T Consensus 217 ~D~vid~~g~-----------~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 217 FDLVYDTLGG-----------PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEEEEESSCT-----------HHHHHHHHHEEEEEEEEES
T ss_pred ceEEEECCCc-----------HHHHHHHHHHhcCCeEEEE
Confidence 9998843221 3578888999999999864
No 370
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.34 E-value=0.065 Score=49.70 Aligned_cols=96 Identities=18% Similarity=0.162 Sum_probs=60.0
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChH-HHHHhCCCCCcc
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV-AFLKAVPEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~-~~l~~~~~~~fD 202 (319)
....+||++|+|. |..+..+++..+ .+|++++.+++-++.+++. .. + .++..+-. ++.+.. .+.+|
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~G-a~Vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~-~~~~D 245 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMG-AETYVISRSSRKREDAMKM-GA------D---HYIATLEEGDWGEKY-FDTFD 245 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHT-CEEEEEESSSTTHHHHHHH-TC------S---EEEEGGGTSCHHHHS-CSCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHc-CC------C---EEEcCcCchHHHHHh-hcCCC
Confidence 4568999999754 666777777654 4799999999888888873 21 1 12221111 233333 25799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+||-..... .. ..++.+.+.|+++|.++.-
T Consensus 246 ~vid~~g~~-~~-------~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 246 LIVVCASSL-TD-------IDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEEECCSCS-TT-------CCTTTGGGGEEEEEEEEEC
T ss_pred EEEECCCCC-cH-------HHHHHHHHHhcCCCEEEEe
Confidence 998443220 00 1245667789999998864
No 371
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.32 E-value=0.0086 Score=69.18 Aligned_cols=103 Identities=14% Similarity=0.142 Sum_probs=49.2
Q ss_pred CceeeEeeccccHHHHHHHhcCC-----CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCc
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSS-----VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~-----~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
..+||+||.|+|..+..+++... ..+++..|+++...+.+++.|... .++.-.-|..+. .......|
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~-------di~~~~~d~~~~-~~~~~~~y 1312 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL-------HVTQGQWDPANP-APGSLGKA 1312 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH-------TEEEECCCSSCC-CC-----C
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc-------cccccccccccc-ccCCCCce
Confidence 35999999999987766554321 347899999998888787776532 111110111000 00013569
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||....-+.. .. ..+.++.++++|||||.+++..
T Consensus 1313 dlvia~~vl~~t--~~--~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1313 DLLVCNCALATL--GD--PAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp CEEEEECC------------------------CCEEEEEE
T ss_pred eEEEEccccccc--cc--HHHHHHHHHHhcCCCcEEEEEe
Confidence 999964221111 11 2346889999999999988753
No 372
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.28 E-value=0.11 Score=46.85 Aligned_cols=92 Identities=17% Similarity=0.079 Sum_probs=61.5
Q ss_pred CCCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcCh-HHHHHhCCCCC
Q 020933 124 IPNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG-VAFLKAVPEGT 200 (319)
Q Consensus 124 ~~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~-~~~l~~~~~~~ 200 (319)
....++||++|+ |.|..+..+++..+ .+|++++.+++-++.+++. .. + .++..+- .++.+.. +.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~-ga------~---~~~~~~~~~~~~~~~--~~ 189 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPEKLALPLAL-GA------E---EAATYAEVPERAKAW--GG 189 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGGGSHHHHHT-TC------S---EEEEGGGHHHHHHHT--TS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhc-CC------C---EEEECCcchhHHHHh--cC
Confidence 345689999996 45667777777655 4899999999888888763 10 1 2222221 2343332 57
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+|+|+. ... +.++.+.++|+++|.++.-
T Consensus 190 ~d~vid-~g~-----------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 190 LDLVLE-VRG-----------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEEEEE-CSC-----------TTHHHHHTTEEEEEEEEEC
T ss_pred ceEEEE-CCH-----------HHHHHHHHhhccCCEEEEE
Confidence 999985 422 1367888999999998864
No 373
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.25 E-value=0.091 Score=47.83 Aligned_cols=75 Identities=19% Similarity=0.139 Sum_probs=55.7
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCce--EEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-C-CCCc
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEK--IDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-P-EGTY 201 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~--v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~-~~~f 201 (319)
.+-+|+||-||.|++...+.+.. ..- |.++|+|+..++..+.+++ ...++.+|..++.... + ...+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG-~~~~~v~a~E~d~~a~~ty~~N~~---------~~~~~~~DI~~i~~~~i~~~~~~ 84 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLG-IQVDRYIASEVCEDSITVGMVRHQ---------GKIMYVGDVRSVTQKHIQEWGPF 84 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTT-BCEEEEEEECCCHHHHHHHHHHTT---------TCEEEECCGGGCCHHHHHHTCCC
T ss_pred CCCEEEEeCcCccHHHHHHHHCC-CccceEEEEECCHHHHHHHHHhCC---------CCceeCCChHHccHHHhcccCCc
Confidence 45699999999999999988763 333 6899999999998888764 2367788987753221 0 2469
Q ss_pred cEEEEcCCC
Q 020933 202 DAVIVDSSD 210 (319)
Q Consensus 202 DvIi~D~~~ 210 (319)
|+|+..++.
T Consensus 85 Dll~ggpPC 93 (295)
T 2qrv_A 85 DLVIGGSPC 93 (295)
T ss_dssp SEEEECCCC
T ss_pred CEEEecCCC
Confidence 999986653
No 374
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=94.12 E-value=0.07 Score=49.41 Aligned_cols=98 Identities=19% Similarity=0.055 Sum_probs=61.3
Q ss_pred CCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCCc
Q 020933 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~f 201 (319)
...++||++|+ |.|..+..+++..+ .+|++++.+++-++.+++.-. +.-+.....|..+.+.+ .....+
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~ga-------~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTEEGQKIVLQNGA-------HEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTC-------SEEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHcCC-------CEEEeCCCchHHHHHHHHcCCCCc
Confidence 45689999996 45666667777654 589999999998888776411 10011111232333322 123479
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||.... .+.++...+.|+++|.+++-.
T Consensus 241 D~vi~~~G-----------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLA-----------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCH-----------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCC-----------hHHHHHHHHhccCCCEEEEEe
Confidence 99985432 134677889999999998643
No 375
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.10 E-value=0.053 Score=49.48 Aligned_cols=98 Identities=13% Similarity=0.035 Sum_probs=60.9
Q ss_pred CCCceeeEee--ccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCCc
Q 020933 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~f 201 (319)
...++||++| +|.|..+..+++..+ .+|++++.+++-++.+++. .. +.-+.....|..+.+.+ .....+
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTAQKAQSALKA-GA------WQVINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHH-TC------SEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHc-CC------CEEEECCCccHHHHHHHHhCCCCc
Confidence 4568999999 455666666666544 4899999999888888763 11 10000001222232322 223469
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||.... . +.++.+.+.|+++|.+++-.
T Consensus 211 D~vi~~~g----~-------~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 211 RVVYDSVG----R-------DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEECSC----G-------GGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCc----h-------HHHHHHHHHhcCCCEEEEEe
Confidence 99985542 1 34788889999999988653
No 376
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.10 E-value=0.064 Score=49.68 Aligned_cols=99 Identities=10% Similarity=0.075 Sum_probs=61.2
Q ss_pred CCCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-CCCCC
Q 020933 124 IPNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA-VPEGT 200 (319)
Q Consensus 124 ~~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~-~~~~~ 200 (319)
....++||++|+ |.|..+..+++..+ .+|++++.+++-++.+++.-... -+.....|..+.+.+ .....
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~~ 231 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQKKLQMAEKLGAAA-------GFNYKKEDFSEATLKFTKGAG 231 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTCSE-------EEETTTSCHHHHHHHHTTTSC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHcCCcE-------EEecCChHHHHHHHHHhcCCC
Confidence 345679999984 45666666777654 58999999999888886541100 001001233333322 22347
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+|+||..... +.++.+.++|+++|.+++-.
T Consensus 232 ~d~vi~~~G~-----------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 232 VNLILDCIGG-----------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEEEESSCG-----------GGHHHHHHHEEEEEEEEECC
T ss_pred ceEEEECCCc-----------hHHHHHHHhccCCCEEEEEe
Confidence 9999854432 13677788999999998753
No 377
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.09 E-value=0.046 Score=49.63 Aligned_cols=88 Identities=15% Similarity=0.260 Sum_probs=57.4
Q ss_pred CCCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 124 IPNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 124 ~~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
...+.+||++|+|. |..+.++++..+. +|++++ +++-.+.+++.-. -.++ .| .+.. .+.+|
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa----------~~v~-~d----~~~v-~~g~D 201 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGV----------RHLY-RE----PSQV-TQKYF 201 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTE----------EEEE-SS----GGGC-CSCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCC----------CEEE-cC----HHHh-CCCcc
Confidence 34578999999854 6677788887554 899999 8888888877421 1122 24 2222 56899
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+|+ |.... +.++.+.++|+++|.++.-
T Consensus 202 vv~-d~~g~----------~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 202 AIF-DAVNS----------QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EEE-CC-----------------TTGGGEEEEEEEEEE
T ss_pred EEE-ECCCc----------hhHHHHHHHhcCCCEEEEE
Confidence 988 32221 1235667899999998875
No 378
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.90 E-value=0.28 Score=45.81 Aligned_cols=100 Identities=19% Similarity=0.302 Sum_probs=54.4
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
.+++|+++|+|. |..+...++..+ .+|+++|.+++-++.+++.+. ..+.....+...+.+.. ..+|+|
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~G-a~V~~~d~~~~~~~~~~~~~g--------~~~~~~~~~~~~l~~~~--~~~DvV 233 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMG-AQVTILDVNHKRLQYLDDVFG--------GRVITLTATEANIKKSV--QHADLL 233 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTT--------TSEEEEECCHHHHHHHH--HHCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHhcC--------ceEEEecCCHHHHHHHH--hCCCEE
Confidence 358999999853 222333344444 489999999988777665432 12333333322221111 357999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
|.....+......+.. +.+.+.+++||+++..
T Consensus 234 i~~~g~~~~~~~~li~----~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVT----RDMLSLMKEGAVIVDV 265 (369)
T ss_dssp EECCC-------CCSC----HHHHTTSCTTCEEEEC
T ss_pred EECCCCCccccchhHH----HHHHHhhcCCCEEEEE
Confidence 8755433211222333 4455678999987753
No 379
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.86 E-value=0.099 Score=48.55 Aligned_cols=93 Identities=20% Similarity=0.250 Sum_probs=58.7
Q ss_pred CceeeEeeccc-cHHHHHHHhcCCCceEEEEECCh---HHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 127 PKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDK---MVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 127 ~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~---~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
+++||++|+|. |..+..+++..+. +|++++.++ +-++.+++.-. ..+. . .|..+.+.+. .+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga--------~~v~-~-~~~~~~~~~~-~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKT--------NYYN-S-SNGYDKLKDS-VGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTC--------EEEE-C-TTCSHHHHHH-HCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCC--------ceec-h-HHHHHHHHHh-CCCCC
Confidence 68999999843 4455666665444 899999998 77787776411 1111 1 1222333222 25799
Q ss_pred EEEEcCCCCCCCccccchHHHH-HHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFF-ESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~-~~~~~~LkpgG~lv~~~ 241 (319)
+||.....+ ..+ +.+.+.|+++|.+++-.
T Consensus 249 ~vid~~g~~----------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 249 VIIDATGAD----------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEEECCCCC----------THHHHHHGGGEEEEEEEEECS
T ss_pred EEEECCCCh----------HHHHHHHHHHHhcCCEEEEEe
Confidence 998544321 246 88899999999988653
No 380
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=93.81 E-value=0.17 Score=47.05 Aligned_cols=97 Identities=15% Similarity=0.082 Sum_probs=62.0
Q ss_pred CCCceeeEeecc--ccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 125 PNPKKVLVIGGG--DGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G--~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
..+.+||++|++ .|..+.++++..+. +|+++- +++-++.+++.-. +.-+.....|..+.+.+..++.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa-------~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGA-------EEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTC-------SEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCC-------cEEEECCCchHHHHHHHHccCCcc
Confidence 456799999983 67788888887654 777774 8888888876421 101111123444444433245699
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhc-CCCcEEEEe
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKAL-RPGGVVSTQ 240 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~L-kpgG~lv~~ 240 (319)
+|+-... ....++.+.+.| +++|.++.-
T Consensus 234 ~v~d~~g----------~~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 234 YALDCIT----------NVESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEEESSC----------SHHHHHHHHHHSCTTCEEEEES
T ss_pred EEEECCC----------chHHHHHHHHHhhcCCCEEEEE
Confidence 9883322 235678888889 699998864
No 381
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.65 E-value=0.21 Score=47.07 Aligned_cols=108 Identities=19% Similarity=0.207 Sum_probs=57.8
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCC--CCeEEEE---cC-----hHHHHH
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFED--PRVTLHI---GD-----GVAFLK 194 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~--~~v~v~~---~D-----~~~~l~ 194 (319)
.+.+|++||+|. |..+..+++..+ .+|+++|.++..++.+++.-.... .++. ....-.. .+ -...+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~lGa~~~-~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG-AKTTGYDVRPEVAEQVRSVGAQWL-DLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT-CEEEEECSSGGGHHHHHHTTCEEC-CCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCCeEE-eccccccccccchhhhhHHHHhhhHHHHH
Confidence 467999999986 333444455444 489999999998887776311100 0000 0000000 00 001111
Q ss_pred hCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 195 AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 195 ~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+. -...|+||.-...|......+.+. .+.+.+|||++++--
T Consensus 261 e~-l~~aDIVI~tv~iPg~~ap~Lvt~----emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 261 DA-ITKFDIVITTALVPGRPAPRLVTA----AAATGMQPGSVVVDL 301 (381)
T ss_dssp HH-HTTCSEEEECCCCTTSCCCCCBCH----HHHHTSCTTCEEEET
T ss_pred HH-HhcCCEEEECCCCCCcccceeecH----HHHhcCCCCcEEEEE
Confidence 11 256899997554443344456665 455568988887743
No 382
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.58 E-value=0.22 Score=47.37 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=60.9
Q ss_pred CceeeEeeccccH-H-HHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH--HHHhCCCCCcc
Q 020933 127 PKKVLVIGGGDGG-V-LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTYD 202 (319)
Q Consensus 127 ~~~VL~IG~G~G~-~-~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~--~l~~~~~~~fD 202 (319)
..+|+++|+|.-+ . ++.|.+. ...|++||.|++.++.+++. .+.++.||+.+ .++...-...|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~~-----------g~~vi~GDat~~~~L~~agi~~A~ 70 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRKF-----------GMKVFYGDATRMDLLESAGAAKAE 70 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHHT-----------TCCCEESCTTCHHHHHHTTTTTCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHhC-----------CCeEEEcCCCCHHHHHhcCCCccC
Confidence 3579999997522 2 2223333 25799999999999988752 35678899854 45554346799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+||+-..+.. .....-...+.+.|+..+++.+
T Consensus 71 ~viv~~~~~~-------~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 71 VLINAIDDPQ-------TNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp EEEECCSSHH-------HHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEEECCCChH-------HHHHHHHHHHHhCCCCeEEEEE
Confidence 9987654421 1233445566677877666554
No 383
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.51 E-value=0.028 Score=51.74 Aligned_cols=62 Identities=21% Similarity=0.009 Sum_probs=49.2
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHH
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL 193 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l 193 (319)
.....|||--||+|..+.++.+.. .+.+++|+++..++++++++... ......++.|+.+..
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~i~ 312 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERES--RKWISFEMKPEYVAASAFRFLDN-----NISEEKITDIYNRIL 312 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCS-----CSCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhc-----ccchHHHHHHHHHHH
Confidence 456789999999999999988874 68999999999999999998754 123555566666654
No 384
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.49 E-value=0.095 Score=47.63 Aligned_cols=91 Identities=15% Similarity=0.198 Sum_probs=60.3
Q ss_pred eeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEE
Q 020933 129 KVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (319)
Q Consensus 129 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~ 206 (319)
+||++|+ |.|..+.++++..+. +|++++.+++-.+.+++.-. + .++..+-...++....+.+|+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~~~~~~~~d~v~- 216 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGA-------N---RILSRDEFAESRPLEKQLWAGAI- 216 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTC-------S---EEEEGGGSSCCCSSCCCCEEEEE-
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC-------C---EEEecCCHHHHHhhcCCCccEEE-
Confidence 5999996 557788888887654 89999999999998887411 1 11111111112222245799877
Q ss_pred cCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 207 D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|... .+.++.+.++|+++|.++.-.
T Consensus 217 d~~g----------~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 217 DTVG----------DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp ESSC----------HHHHHHHHHTEEEEEEEEECC
T ss_pred ECCC----------cHHHHHHHHHHhcCCEEEEEe
Confidence 3321 136888999999999998753
No 385
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.09 E-value=0.36 Score=45.85 Aligned_cols=108 Identities=18% Similarity=0.226 Sum_probs=59.5
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCC-----C-CCeEEEE---cCh-----H
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFE-----D-PRVTLHI---GDG-----V 190 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~-----~-~~v~v~~---~D~-----~ 190 (319)
.+.+|++||+|. |..+..+++..+ .+|+++|+++..++.+++.-.... ... + .....+. .+. .
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG-a~V~v~D~~~~~l~~~~~~G~~~~-~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG-AVVSATDVRPAAKEQVASLGAKFI-AVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSTTHHHHHHHTTCEEC-CCCC-----------------CHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHcCCcee-ecccccccccccccchhhhcchhhhhhhH
Confidence 467999999986 434444555554 489999999998888876311110 000 0 0000000 000 0
Q ss_pred HHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 191 AFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 191 ~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
.-+.+. -...|+||.-...|......++++ .+.+.+|||.+++--
T Consensus 267 ~~l~e~-l~~aDVVI~tvlipg~~ap~Lvt~----emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 267 ALVAEH-IAKQDIVITTALIPGRPAPRLVTR----EMLDSMKPGSVVVDL 311 (405)
T ss_dssp HHHHHH-HHTCSEEEECCCCSSSCCCCCBCH----HHHTTSCTTCEEEET
T ss_pred hHHHHH-hcCCCEEEECCcCCCCCCCEEecH----HHHhcCCCCCEEEEE
Confidence 011111 145799997654454445566665 455678998888743
No 386
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=93.08 E-value=4.1 Score=44.34 Aligned_cols=151 Identities=13% Similarity=0.094 Sum_probs=90.9
Q ss_pred CceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHh-----------
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKA----------- 195 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~----------- 195 (319)
.-++++|-||.|++...+.+..-...+.++|+|+..++.-+.+++ ...++.+|...++..
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p---------~~~~~~~DI~~l~~~~~~gdi~~~~~ 921 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP---------GTTVFTEDCNVLLKLVMAGEVTNSLG 921 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT---------TSEEECSCHHHHHHHHTTTCSBCSSC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC---------CCcEeeccHHHHhHhhhccchhhhhh
Confidence 458999999999999998776311457899999999999888865 345777887766421
Q ss_pred --CC-CCCccEEEEcCCCC-CCCccc-----------cchHHHHHHHHHhcCCCcEEEEecCCccc--ChHHHHHHHHHH
Q 020933 196 --VP-EGTYDAVIVDSSDP-IGPAQE-----------LFEKPFFESVAKALRPGGVVSTQAESIWL--HMHIIEDIVANC 258 (319)
Q Consensus 196 --~~-~~~fDvIi~D~~~~-~~~~~~-----------l~~~~f~~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~~~~~l 258 (319)
.+ .+.+|+|+..++.. .+.... ....+|++ +.+.++|.-+++=|+..... ....+..+++.+
T Consensus 922 ~~lp~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lr-iv~~~rPk~fv~ENV~glls~~~g~~~~~il~~L 1000 (1330)
T 3av4_A 922 QRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLS-YCDYYRPRFFLLENVRNFVSYRRSMVLKLTLRCL 1000 (1330)
T ss_dssp CBCCCTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHH-HHHHHCCSEEEEEEEGGGGTTTTTHHHHHHHHHH
T ss_pred hhccccCccceEEecCCCcccccccccccccccchhhHHHHHHHH-HHHHhcCcEEEEeccHHHhccCccHHHHHHHHHH
Confidence 11 23689999766542 222111 01123444 44568998777766654332 234566676666
Q ss_pred HhhcCCceeEeEEe-----ecccCCCeeEEEEcCC
Q 020933 259 RQIFKGSVNYAWTT-----VPTYPRTFLPSCSAVN 288 (319)
Q Consensus 259 ~~~F~~~v~~~~~~-----vP~~~~g~~~~~S~~~ 288 (319)
.+.= ..+.+.... +|......++++.+.+
T Consensus 1001 ~~lG-Y~v~~~vLnA~dyGVPQ~R~Rvfivg~r~~ 1034 (1330)
T 3av4_A 1001 VRMG-YQCTFGVLQAGQYGVAQTRRRAIILAAAPG 1034 (1330)
T ss_dssp HHHT-CEEEEEEEEGGGGSCSBCCEEEEEEEECTT
T ss_pred HhcC-CeeeEEEecHHHcCCCccccEEEEEEecCC
Confidence 6541 233333222 3443333447777654
No 387
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=93.00 E-value=0.14 Score=42.02 Aligned_cols=103 Identities=20% Similarity=0.197 Sum_probs=64.6
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-C--CCCc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-P--EGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~--~~~f 201 (319)
.-+.-|||||.|+|..=..+.+..|..+|.++|-.-. -.+.. ..+.-.++.||+++-+... + ..+.
T Consensus 39 ~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~-------~hp~~----~P~~e~~ilGdi~~tL~~~~~r~g~~a 107 (174)
T 3iht_A 39 GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVA-------SHPDS----TPPEAQLILGDIRETLPATLERFGATA 107 (174)
T ss_dssp TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCC-------CCGGG----CCCGGGEEESCHHHHHHHHHHHHCSCE
T ss_pred CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEeeec-------cCCCC----CCchHheecccHHHHHHHHHHhcCCce
Confidence 3467899999999999999988888899999986311 11111 1245679999999887642 0 2344
Q ss_pred cEEEEcCCCCCCCccccchHHH-HHHHHHhcCCCcEEEE
Q 020933 202 DAVIVDSSDPIGPAQELFEKPF-FESVAKALRPGGVVST 239 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f-~~~~~~~LkpgG~lv~ 239 (319)
-++-.|.-.... .....+..+ =..+..+|.|||+++-
T Consensus 108 ~LaHaD~G~g~~-~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 108 SLVHADLGGHNR-EKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp EEEEECCCCSCH-HHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEeecCCCCc-chhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 444445433221 111111122 2345789999999985
No 388
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.96 E-value=0.1 Score=47.53 Aligned_cols=93 Identities=14% Similarity=0.162 Sum_probs=56.5
Q ss_pred eeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEE
Q 020933 129 KVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (319)
Q Consensus 129 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~ 206 (319)
+||++|+ |.|..+.++++..+ .+|++++.+++-++.+++. .. +.-+.....| .+.++....+.+|+||-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~~~i~~~~~~-~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAEHDYLRVL-GA------KEVLAREDVM-AERIRPLDKQRWAAAVD 222 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTCHHHHHHT-TC------SEEEECC----------CCSCCEEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHc-CC------cEEEecCCcH-HHHHHHhcCCcccEEEE
Confidence 8999996 55777788888755 4799999998888888763 21 1001110111 12222222357999884
Q ss_pred cCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 207 DSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 207 D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.... +.++.+.+.|+++|.+++-.
T Consensus 223 ~~g~-----------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 223 PVGG-----------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CSTT-----------TTHHHHHHTEEEEEEEEECS
T ss_pred CCcH-----------HHHHHHHHhhccCCEEEEEe
Confidence 3321 13677888999999998753
No 389
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=92.86 E-value=5.2 Score=40.88 Aligned_cols=56 Identities=14% Similarity=0.178 Sum_probs=41.6
Q ss_pred ceeeEeeccccHHHHHHHhcC-----CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH
Q 020933 128 KKVLVIGGGDGGVLREVSRHS-----SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF 192 (319)
Q Consensus 128 ~~VL~IG~G~G~~~~~l~~~~-----~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~ 192 (319)
-+|+||-||.|+++..+.+.. ...-+.++|+|+..++.-+.+++. ..++++|..++
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~---------~~~~~~di~~i 273 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQ---------TEVRNEKADEF 273 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTT---------SEEEESCHHHH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCC---------CceecCcHHHh
Confidence 479999999999988876542 124578999999999999988753 34555555443
No 390
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.86 E-value=0.55 Score=37.55 Aligned_cols=100 Identities=12% Similarity=0.070 Sum_probs=58.6
Q ss_pred CceeeEeeccccHHHHHHHhc--CCCceEEEEECC-hHHHHHHHhccccccCCCCCCCeEEEEcChHH--HHHhCCCCCc
Q 020933 127 PKKVLVIGGGDGGVLREVSRH--SSVEKIDICEID-KMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTY 201 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid-~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~--~l~~~~~~~f 201 (319)
.++|+++|+| .++..+++. ....+|+++|.+ ++..+..++.++ ..+.++.+|+.+ .+....-+..
T Consensus 3 ~~~vlI~G~G--~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a~i~~a 72 (153)
T 1id1_A 3 KDHFIVCGHS--ILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--------DNADVIPGDSNDSSVLKKAGIDRC 72 (153)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--------TTCEEEESCTTSHHHHHHHTTTTC
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc--------CCCeEEEcCCCCHHHHHHcChhhC
Confidence 4589999875 454444331 112579999998 454444333221 247889999753 3443223578
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
|+|++-..+.. .........+.+.|...++....+
T Consensus 73 d~vi~~~~~d~-------~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 73 RAILALSDNDA-------DNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp SEEEECSSCHH-------HHHHHHHHHHHHTSSSCEEEECSS
T ss_pred CEEEEecCChH-------HHHHHHHHHHHHCCCCEEEEEECC
Confidence 99987554311 223445556677777777775543
No 391
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.59 E-value=1.3 Score=42.73 Aligned_cols=108 Identities=14% Similarity=0.175 Sum_probs=63.9
Q ss_pred CCceeeEeeccccHH--HHHHHhcCCCceEEEEECChHHHHHHHhccccc-cCCCC--------CCCeEEEEcChHHHHH
Q 020933 126 NPKKVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-AVGFE--------DPRVTLHIGDGVAFLK 194 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~-~~~~~--------~~~v~v~~~D~~~~l~ 194 (319)
..-+|.+||+|.-+. +..+++.. .+|+++|+|++.++..++.-... ..+.+ ..++++ ..|..+.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G--~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIG--HDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHhh
Confidence 456899999996443 34455553 47999999999988877642111 00000 113333 344433332
Q ss_pred hCCCCCccEEEEcCCCCC---CCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 195 AVPEGTYDAVIVDSSDPI---GPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 195 ~~~~~~fDvIi~D~~~~~---~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
..|+||+-.+.|. +.+.--+..+.++.+...|++|-+++..+
T Consensus 84 -----~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 84 -----HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp -----HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred -----cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 3599998766543 22222234567888888999877765543
No 392
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=92.56 E-value=0.17 Score=48.13 Aligned_cols=48 Identities=15% Similarity=0.239 Sum_probs=40.2
Q ss_pred CCCceeeEeeccccHHHHHHH-hcCC-CceEEEEECChHHHHHHHhcccc
Q 020933 125 PNPKKVLVIGGGDGGVLREVS-RHSS-VEKIDICEIDKMVVDVSKQFFPD 172 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~-~~~~-~~~v~~VEid~~vi~~ak~~~~~ 172 (319)
++...|+|||++.|..+..++ +..+ ..+|.++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 456799999999999999887 4443 37999999999999999887654
No 393
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.51 E-value=1.2 Score=40.53 Aligned_cols=91 Identities=18% Similarity=0.123 Sum_probs=57.7
Q ss_pred CceeeEeeccccH--HHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH-HHHhCCCCCccE
Q 020933 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA-FLKAVPEGTYDA 203 (319)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~-~l~~~~~~~fDv 203 (319)
..+|.+||+|.=+ ++..+.+.....+|+++|.+++.++.+++. +..+ -...|..+ .+ ...|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~------G~~~----~~~~~~~~~~~-----~~aDv 97 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL------GIID----EGTTSIAKVED-----FSPDF 97 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT------TSCS----EEESCTTGGGG-----GCCSE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC------CCcc----hhcCCHHHHhh-----ccCCE
Confidence 3689999998633 444555553223899999999988877653 1111 12234333 22 34799
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEE
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVST 239 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~ 239 (319)
||+-.+.. ...+.++.+...|+++.+++-
T Consensus 98 Vilavp~~-------~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 98 VMLSSPVR-------TFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp EEECSCGG-------GHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEeCCHH-------HHHHHHHHHhhccCCCcEEEE
Confidence 99765431 145788889999998877654
No 394
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=92.45 E-value=0.12 Score=47.57 Aligned_cols=97 Identities=14% Similarity=0.032 Sum_probs=55.6
Q ss_pred CCCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCc
Q 020933 124 IPNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 124 ~~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
...+.+||++|+ |.|..+.++++..+..+|++++ +++-.+.++ +.. +.-+. ...|..+.+.+...+.+
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga------~~~~~-~~~~~~~~~~~~~~~g~ 209 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSV------THLFD-RNADYVQEVKRISAEGV 209 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGS------SEEEE-TTSCHHHHHHHHCTTCE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCC------cEEEc-CCccHHHHHHHhcCCCc
Confidence 345689999997 3466777788765556888887 555555555 221 11111 12333444433334679
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||-.... +.++.+.++|+++|.+++-.
T Consensus 210 Dvv~d~~g~-----------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 210 DIVLDCLCG-----------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEEECC------------------CTTEEEEEEEEEEC
T ss_pred eEEEECCCc-----------hhHHHHHHHhhcCCEEEEEC
Confidence 998843321 12467788999999998653
No 395
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=92.42 E-value=0.26 Score=47.21 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=62.5
Q ss_pred CCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE----cCh------HHH
Q 020933 125 PNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI----GDG------VAF 192 (319)
Q Consensus 125 ~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~----~D~------~~~ 192 (319)
..+.+||++|+ |.|..+.++++..+ .++++++.+++-++.+++.-........+..+.+.. .|. .+.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~G-a~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGG-ANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 45679999996 45777788888755 578888899999999877421110000111110000 011 122
Q ss_pred HHh-CCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 193 LKA-VPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 193 l~~-~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+.+ .....+|+||-. .. . +.++.+.++|+++|.+++-
T Consensus 306 i~~~t~g~g~Dvvid~-~G---------~-~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 306 IRELTGGEDIDIVFEH-PG---------R-ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHTSCCEEEEEEC-SC---------H-HHHHHHHHHEEEEEEEEES
T ss_pred HHHHhCCCCCcEEEEc-CC---------c-hhHHHHHHHhhCCcEEEEE
Confidence 222 123579998832 21 1 4688889999999999874
No 396
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.40 E-value=0.43 Score=39.34 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=55.8
Q ss_pred CceeeEeeccccH-H-HHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChH--HHHHhC-CCCCc
Q 020933 127 PKKVLVIGGGDGG-V-LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV--AFLKAV-PEGTY 201 (319)
Q Consensus 127 ~~~VL~IG~G~G~-~-~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~--~~l~~~-~~~~f 201 (319)
..+|+++|+|.-+ . +..|.+..+ .+|+++|.|++.++.+++. .+.++.+|.. +.+... .-..+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g-~~V~vid~~~~~~~~~~~~-----------g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG-KISLGIEIREEAAQQHRSE-----------GRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC-SCEEEEESCHHHHHHHHHT-----------TCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC-CeEEEEECCHHHHHHHHHC-----------CCCEEEcCCCCHHHHHhccCCCCC
Confidence 4589999987522 2 222333302 5799999999887766542 2445667764 334332 23568
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
|+||+-..+.. .....-...+.+.|++.++..+.
T Consensus 107 d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 107 KLVLLAMPHHQ-------GNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CEEEECCSSHH-------HHHHHHHHHHHTTCCSEEEEEES
T ss_pred CEEEEeCCChH-------HHHHHHHHHHHHCCCCEEEEEEC
Confidence 99997544311 11122234556777788776543
No 397
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.37 E-value=0.71 Score=43.66 Aligned_cols=42 Identities=21% Similarity=0.266 Sum_probs=30.7
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHh
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQ 168 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~ 168 (319)
.+.+|+++|+|. |..+..+++..+ .+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G-a~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG-AIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHH
Confidence 367999999875 334444555555 489999999988777754
No 398
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.07 E-value=0.29 Score=46.62 Aligned_cols=99 Identities=14% Similarity=0.055 Sum_probs=61.9
Q ss_pred CCCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcCh------------
Q 020933 124 IPNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG------------ 189 (319)
Q Consensus 124 ~~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~------------ 189 (319)
...+++||++|+ |.|..+..+++..+ .++++++.+++-++.+++.-. +.-+.....|.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~lGa-------~~~i~~~~~~~~~~~~~~~~~~~ 289 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRALGC-------DLVINRAELGITDDIADDPRRVV 289 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTTC-------CCEEEHHHHTCCTTGGGCHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHhcCC-------CEEEecccccccccccccccccc
Confidence 345689999996 44667777888754 578899999999998876411 11111111110
Q ss_pred ------HHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 190 ------VAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 190 ------~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.+.+.......+|+||-... .+.++...+.|+++|.+++-.
T Consensus 290 ~~~~~~~~~v~~~~g~g~Dvvid~~G-----------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 290 ETGRKLAKLVVEKAGREPDIVFEHTG-----------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHSSCCSEEEECSC-----------HHHHHHHHHHSCTTCEEEESC
T ss_pred hhhhHHHHHHHHHhCCCceEEEECCC-----------chHHHHHHHHHhcCCEEEEEe
Confidence 12222211357999884322 135788889999999998753
No 399
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=91.85 E-value=0.34 Score=44.98 Aligned_cols=97 Identities=15% Similarity=0.195 Sum_probs=58.6
Q ss_pred CCCceeeEee--ccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 125 PNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
..+++||++| +|.|..+.++++..+ .+|++++ +++-.+.+++.-. +.-+.....|..+-+.. ...+|
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~-~~~~~~~~~~lGa-------~~v~~~~~~~~~~~~~~--~~g~D 250 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVC-SQDASELVRKLGA-------DDVIDYKSGSVEEQLKS--LKPFD 250 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEE-CGGGHHHHHHTTC-------SEEEETTSSCHHHHHHT--SCCBS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEe-ChHHHHHHHHcCC-------CEEEECCchHHHHHHhh--cCCCC
Confidence 4567999999 445777778888755 4788888 6666777765311 10011111233333432 25799
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+||-....+ ...++...+.|+++|.++.-.
T Consensus 251 ~vid~~g~~---------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 251 FILDNVGGS---------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEEESSCTT---------HHHHGGGGBCSSSCCEEEESC
T ss_pred EEEECCCCh---------hhhhHHHHHhhcCCcEEEEeC
Confidence 988433221 123566778899999998754
No 400
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.82 E-value=0.72 Score=40.12 Aligned_cols=100 Identities=13% Similarity=0.081 Sum_probs=56.1
Q ss_pred HHHHhccccCCCCCceeeEeeccccHHHHH--HHhcCCCceEEEEEC--ChHHHHHHHhccccccCCCCCCCeEEEEcCh
Q 020933 114 EMITHLPLCSIPNPKKVLVIGGGDGGVLRE--VSRHSSVEKIDICEI--DKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG 189 (319)
Q Consensus 114 e~l~~l~l~~~~~~~~VL~IG~G~G~~~~~--l~~~~~~~~v~~VEi--d~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~ 189 (319)
+.+.++|+...-..++||++|+|.=+..+. |++.. .+|++|+. ++++.+++.+ .+++++..+.
T Consensus 18 ~~~~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~G--A~VtVvap~~~~~l~~l~~~-----------~~i~~i~~~~ 84 (223)
T 3dfz_A 18 EGRHMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQEG--AAITVVAPTVSAEINEWEAK-----------GQLRVKRKKV 84 (223)
T ss_dssp ----CCEEEECCTTCCEEEECCSHHHHHHHHHHGGGC--CCEEEECSSCCHHHHHHHHT-----------TSCEEECSCC
T ss_pred cccCccccEEEcCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCCHHHHHHHHc-----------CCcEEEECCC
Confidence 456667777666789999999986554332 44443 57888854 4455444432 2566665543
Q ss_pred HHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 190 VAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 190 ~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
..- . -..+|+||....++ +.-..+++..+ -|++|-.+
T Consensus 85 ~~~--d--L~~adLVIaAT~d~----------~~N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 85 GEE--D--LLNVFFIVVATNDQ----------AVNKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp CGG--G--SSSCSEEEECCCCT----------HHHHHHHHHSC-TTCEEEC-
T ss_pred CHh--H--hCCCCEEEECCCCH----------HHHHHHHHHHh-CCCEEEEe
Confidence 211 1 24689999654432 33445555555 78886443
No 401
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=91.78 E-value=1.4 Score=41.75 Aligned_cols=46 Identities=11% Similarity=-0.015 Sum_probs=36.8
Q ss_pred CceeeEeeccccHHHHHHHhcCC-Cce----EEEEECChHHHHHHHhcccc
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSS-VEK----IDICEIDKMVVDVSKQFFPD 172 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~-~~~----v~~VEid~~vi~~ak~~~~~ 172 (319)
.-+||++-||.|+....+.+... ..- |.++|+|+..++.-+.+++.
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 35899999999999988876421 123 78899999999999888864
No 402
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.59 E-value=0.49 Score=44.37 Aligned_cols=42 Identities=17% Similarity=0.233 Sum_probs=30.6
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHh
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQ 168 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~ 168 (319)
.+++|+++|+|. |..+..+++..+. +|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 478999999875 3334445555554 69999999887777765
No 403
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=91.56 E-value=2.2 Score=37.00 Aligned_cols=110 Identities=8% Similarity=0.103 Sum_probs=62.4
Q ss_pred CCceeeEeecccc-HHH----HHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HH
Q 020933 126 NPKKVLVIGGGDG-GVL----REVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LK 194 (319)
Q Consensus 126 ~~~~VL~IG~G~G-~~~----~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~ 194 (319)
+.++||+.|++++ +++ +.+++. ..+|++++.++...+..++..... ...++.++..|..+. ++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTL----DRNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTS----SSCCCEEEECCCSSSHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhc----CCCCceEEeCCCCCHHHHHHHHH
Confidence 4678999997632 244 444444 367999998876555555443332 234788898887432 21
Q ss_pred hC--CCCCccEEEEcCCCCC-----CCccccch--------------HHHHHHHHHhcCCCcEEEEec
Q 020933 195 AV--PEGTYDAVIVDSSDPI-----GPAQELFE--------------KPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 195 ~~--~~~~fDvIi~D~~~~~-----~~~~~l~~--------------~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.. ..+..|++|.+..... .+...... ....+.+...++++|.++..+
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 11 0247899998654321 11111111 124456677788888777543
No 404
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.56 E-value=3.8 Score=39.19 Aligned_cols=106 Identities=14% Similarity=0.171 Sum_probs=61.5
Q ss_pred ceeeEeeccccHHH--HHHHhcCCCceEEEEECChHHHHHHHhccccc-cCCCC--------CCCeEEEEcChHHHHHhC
Q 020933 128 KKVLVIGGGDGGVL--REVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-AVGFE--------DPRVTLHIGDGVAFLKAV 196 (319)
Q Consensus 128 ~~VL~IG~G~G~~~--~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~-~~~~~--------~~~v~v~~~D~~~~l~~~ 196 (319)
.+|.+||+|.-+.. ..+++.. .+|+++|++++.++..++..... ..++. ..++++ ..|..+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G--~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~--- 76 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG--ANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV--- 76 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG---
T ss_pred CEEEEECcCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH---
Confidence 37999999864433 3345442 58999999999888776632111 00000 123443 34544433
Q ss_pred CCCCccEEEEcCCCCCCC---ccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 197 PEGTYDAVIVDSSDPIGP---AQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 197 ~~~~fDvIi~D~~~~~~~---~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
...|+||+-.+.+... +.--+..+.++.+.+.|++|-+++..+
T Consensus 77 --~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 77 --PEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp --GGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred --hcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 2469999876554321 111124567788888998877666544
No 405
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.35 E-value=1.1 Score=43.07 Aligned_cols=103 Identities=19% Similarity=0.262 Sum_probs=62.5
Q ss_pred CceeeEeeccccH--HHHHHHhcCCCceEEEEECChHHHHHHHhcccc----------cc-CCCCCCCeEEEEcChHHHH
Q 020933 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPD----------VA-VGFEDPRVTLHIGDGVAFL 193 (319)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~----------~~-~~~~~~~v~v~~~D~~~~l 193 (319)
.++|.+||+|.-+ ++..+++.. .+|+++|++++.++.+++.... .. ........++ ..|. +.+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~~~ 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVG--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-KEL 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-HHH
Confidence 3579999999744 344455442 5799999999988877653211 00 0001122333 4553 222
Q ss_pred HhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 194 KAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 194 ~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
...|+||.-.+... -...++++.+...++|+.+++.++.+
T Consensus 113 -----~~aDlVIeaVpe~~-----~~k~~v~~~l~~~~~~~~ii~snTs~ 152 (463)
T 1zcj_A 113 -----STVDLVVEAVFEDM-----NLKKKVFAELSALCKPGAFLCTNTSA 152 (463)
T ss_dssp -----TTCSEEEECCCSCH-----HHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred -----CCCCEEEEcCCCCH-----HHHHHHHHHHHhhCCCCeEEEeCCCC
Confidence 35799997664311 12357888899999999888875533
No 406
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.24 E-value=1.3 Score=34.51 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=45.1
Q ss_pred CceeeEeeccccHHHHH----HHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH--HHHhCCCCC
Q 020933 127 PKKVLVIGGGDGGVLRE----VSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGT 200 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~----l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~--~l~~~~~~~ 200 (319)
.++|+++|+|. ++.. +.+. ..+|+++|.|++.++.+++. .+.++.+|..+ .+....-..
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~-----------~~~~~~gd~~~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAA--GKKVLAVDKSKEKIELLEDE-----------GFDAVIADPTDESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHT-----------TCEEEECCTTCHHHHHHSCCTT
T ss_pred CCEEEEECCCH--HHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHC-----------CCcEEECCCCCHHHHHhCCccc
Confidence 35899999865 4333 3333 35799999999988766542 35677888753 444443357
Q ss_pred ccEEEEcCC
Q 020933 201 YDAVIVDSS 209 (319)
Q Consensus 201 fDvIi~D~~ 209 (319)
+|+||+-..
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 899986544
No 407
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.04 E-value=3.6 Score=39.66 Aligned_cols=108 Identities=12% Similarity=0.189 Sum_probs=62.3
Q ss_pred ceeeEeeccccHH--HHHHHhcCCCceEEEEECChHHHHHHHhccccc-cCCCC-------CCCeEEEEcChHHHHHhCC
Q 020933 128 KKVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-AVGFE-------DPRVTLHIGDGVAFLKAVP 197 (319)
Q Consensus 128 ~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~-~~~~~-------~~~v~v~~~D~~~~l~~~~ 197 (319)
.+|.+||+|.-+. +..+++.....+|+++|++++.++..++..... ..+++ ..++++ ..|..+.+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~~--- 85 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAIA--- 85 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHhh---
Confidence 4899999997554 444556532458999999999888776431100 00000 012332 334333332
Q ss_pred CCCccEEEEcCCCCCCC-------cccc-chHHHHHHHHHhcCCCcEEEEec
Q 020933 198 EGTYDAVIVDSSDPIGP-------AQEL-FEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 198 ~~~fDvIi~D~~~~~~~-------~~~l-~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
..|+||+-.+.|... ...+ +..+.++.+.+.|++|-+++..+
T Consensus 86 --~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 135 (481)
T 2o3j_A 86 --EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS 135 (481)
T ss_dssp --HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred --cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 359999876654321 1111 24567788889999877776543
No 408
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.03 E-value=1.7 Score=33.35 Aligned_cols=92 Identities=16% Similarity=0.154 Sum_probs=51.6
Q ss_pred ceeeEeeccccH--HHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChH--HHHHhCCCCCccE
Q 020933 128 KKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV--AFLKAVPEGTYDA 203 (319)
Q Consensus 128 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~--~~l~~~~~~~fDv 203 (319)
.+|+++|+|.-+ ++..+.+. ..+|+++|.+++.++..++.+ .+.++.+|.. +.+....-..+|+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEI----------DALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC----------SSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhc----------CcEEEEcCCCCHHHHHHcCcccCCE
Confidence 589999886422 12223333 257999999998776554322 2345666653 2333221356899
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEE
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVS 238 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv 238 (319)
|++-..+.. ....+..+.+.+.++-+++
T Consensus 73 vi~~~~~~~-------~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 73 YIAVTGKEE-------VNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp EEECCSCHH-------HHHHHHHHHHHTTCCCEEE
T ss_pred EEEeeCCch-------HHHHHHHHHHHcCCCEEEE
Confidence 997643310 1233445566678764444
No 409
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.76 E-value=0.66 Score=41.96 Aligned_cols=92 Identities=16% Similarity=0.103 Sum_probs=57.7
Q ss_pred CCCCceeeEee--ccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH-HHHhCCCCC
Q 020933 124 IPNPKKVLVIG--GGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA-FLKAVPEGT 200 (319)
Q Consensus 124 ~~~~~~VL~IG--~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~-~l~~~~~~~ 200 (319)
...+.+||++| +|.|..+.++++..+. +|+++.. ++-.+.+++.-. + .++..+-.+ +.+. -..
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~-~~~~~~~~~lGa------~----~~i~~~~~~~~~~~--~~g 215 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTAS-KRNHAFLKALGA------E----QCINYHEEDFLLAI--STP 215 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEEC-HHHHHHHHHHTC------S----EEEETTTSCHHHHC--CSC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEec-cchHHHHHHcCC------C----EEEeCCCcchhhhh--ccC
Confidence 34568999997 4457778888887654 7888874 444777776421 1 122222122 3222 257
Q ss_pred ccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 201 YDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 201 fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
+|+|+-... . +.++.+.++|+++|.++.-
T Consensus 216 ~D~v~d~~g----------~-~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 216 VDAVIDLVG----------G-DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEEEESSC----------H-HHHHHHGGGEEEEEEEEEC
T ss_pred CCEEEECCC----------c-HHHHHHHHhccCCCEEEEe
Confidence 999883221 1 2348889999999999874
No 410
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.69 E-value=0.54 Score=37.71 Aligned_cols=100 Identities=15% Similarity=0.184 Sum_probs=54.3
Q ss_pred CCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChH--HHHHhCCCCCcc
Q 020933 126 NPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV--AFLKAVPEGTYD 202 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~--~~l~~~~~~~fD 202 (319)
...+|+++|+|. |......++..+ .+|+++|.+++.++.+++ .....++.+|.. +.+....-..+|
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g-~~V~vid~~~~~~~~~~~----------~~g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSG-HSVVVVDKNEYAFHRLNS----------EFSGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT-CEEEEEESCGGGGGGSCT----------TCCSEEEESCTTSHHHHHTTTGGGCS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHh----------cCCCcEEEecCCCHHHHHHcCcccCC
Confidence 457999999865 222222222223 589999999876543221 123456666653 233322124689
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
+||.-..++. .......+.+.+.+...++....+
T Consensus 87 ~Vi~~~~~~~-------~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 87 MVFAFTNDDS-------TNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp EEEECSSCHH-------HHHHHHHHHHHTSCCSEEEEECSS
T ss_pred EEEEEeCCcH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 9996544311 122334445556666677765544
No 411
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.55 E-value=0.43 Score=43.84 Aligned_cols=106 Identities=10% Similarity=0.120 Sum_probs=64.4
Q ss_pred CCCceeeEeeccccHHHH--HHHhcCCCceEEEEECChHHHHHHHhccccc----c-CC-CCC--------CCeEEEEcC
Q 020933 125 PNPKKVLVIGGGDGGVLR--EVSRHSSVEKIDICEIDKMVVDVSKQFFPDV----A-VG-FED--------PRVTLHIGD 188 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~--~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~----~-~~-~~~--------~~v~v~~~D 188 (319)
+...+|.+||+|+-+... .++.. ..+|+.+|++++.++.+.++.... . .+ +.. .+++. ..|
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~ 80 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN 80 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccc
Confidence 456799999999755443 34444 367999999999988776654321 0 01 110 12332 234
Q ss_pred hHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 189 GVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 189 ~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
..+.+ ...|+||=..+.. --..++.|+++-++++|+-+|..|+.+
T Consensus 81 l~~a~-----~~ad~ViEav~E~-----l~iK~~lf~~l~~~~~~~aIlaSNTSs 125 (319)
T 3ado_A 81 LAEAV-----EGVVHIQECVPEN-----LDLKRKIFAQLDSIVDDRVVLSSSSSC 125 (319)
T ss_dssp HHHHT-----TTEEEEEECCCSC-----HHHHHHHHHHHHTTCCSSSEEEECCSS
T ss_pred hHhHh-----ccCcEEeeccccH-----HHHHHHHHHHHHHHhhhcceeehhhhh
Confidence 33222 3468888333221 123678999999999999999998755
No 412
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.45 E-value=1.5 Score=37.60 Aligned_cols=95 Identities=19% Similarity=0.123 Sum_probs=59.0
Q ss_pred CceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChH--HHHHhCCCCCcc
Q 020933 127 PKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGV--AFLKAVPEGTYD 202 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~--~~l~~~~~~~fD 202 (319)
..+|+++|+| .++..+++.. ... |+++|.|++.++.++ . .+.++.+|+. +.+....-...|
T Consensus 9 ~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---~---------~~~~i~gd~~~~~~l~~a~i~~ad 73 (234)
T 2aef_A 9 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR---S---------GANFVHGDPTRVSDLEKANVRGAR 73 (234)
T ss_dssp -CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---T---------TCEEEESCTTCHHHHHHTTCTTCS
T ss_pred CCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---c---------CCeEEEcCCCCHHHHHhcCcchhc
Confidence 4589999985 5555555432 124 999999998776554 1 3678889886 345443235789
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
+|++-..+.. .........+.+.|+..++..+.+
T Consensus 74 ~vi~~~~~d~-------~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 74 AVIVDLESDS-------ETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp EEEECCSCHH-------HHHHHHHHHHHHCSSSEEEEECSS
T ss_pred EEEEcCCCcH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 9986543310 112344456667888777766544
No 413
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.44 E-value=1.2 Score=33.04 Aligned_cols=68 Identities=22% Similarity=0.250 Sum_probs=41.8
Q ss_pred CceeeEeeccccHHHHHHHh---cCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH--HHHhCCCCCc
Q 020933 127 PKKVLVIGGGDGGVLREVSR---HSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTY 201 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~---~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~--~l~~~~~~~f 201 (319)
.++|+++|+ |.++..+++ ..+..+|++++.++.-++..+. ..+.++..|..+ .+... -..+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-----------~~~~~~~~d~~~~~~~~~~-~~~~ 70 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-----------MGVATKQVDAKDEAGLAKA-LGGF 70 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-----------TTCEEEECCTTCHHHHHHH-TTTC
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-----------CCCcEEEecCCCHHHHHHH-HcCC
Confidence 368999998 444444332 2233689999999987765541 245566666543 22222 2468
Q ss_pred cEEEEcC
Q 020933 202 DAVIVDS 208 (319)
Q Consensus 202 DvIi~D~ 208 (319)
|+||...
T Consensus 71 d~vi~~~ 77 (118)
T 3ic5_A 71 DAVISAA 77 (118)
T ss_dssp SEEEECS
T ss_pred CEEEECC
Confidence 9999654
No 414
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.13 E-value=2.6 Score=36.57 Aligned_cols=78 Identities=18% Similarity=0.244 Sum_probs=50.3
Q ss_pred CCceeeEeec-cccH---HHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHh
Q 020933 126 NPKKVLVIGG-GDGG---VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKA 195 (319)
Q Consensus 126 ~~~~VL~IG~-G~G~---~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~ 195 (319)
++++||+.|+ |.|. +++.+++.. .+|++++.++.-++...+.+... ...++.++..|..+. ++.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEG--ADVVISDYHERRLGETRDQLADL----GLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTT----CSSCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCC--CEEEEecCCHHHHHHHHHHHHhc----CCCceEEEEeCCCCHHHHHHHHHH
Confidence 4678999987 4442 334455553 67999999988777666555432 235899999997542 111
Q ss_pred C--CCCCccEEEEcCC
Q 020933 196 V--PEGTYDAVIVDSS 209 (319)
Q Consensus 196 ~--~~~~fDvIi~D~~ 209 (319)
. .-++.|++|.+.-
T Consensus 95 ~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHhCCCcEEEECCC
Confidence 1 0247899998654
No 415
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.13 E-value=4.9 Score=35.70 Aligned_cols=108 Identities=11% Similarity=0.119 Sum_probs=61.7
Q ss_pred CCceeeEeecccc-HHH----HHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HH
Q 020933 126 NPKKVLVIGGGDG-GVL----REVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LK 194 (319)
Q Consensus 126 ~~~~VL~IG~G~G-~~~----~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~ 194 (319)
..+.||+.|+++| +++ +.+++.. .+|++++.++...+.+++..... .++.++..|..+. ++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAG--AELAFTYQGDALKKRVEPLAEEL------GAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTT--CEEEEEECSHHHHHHHHHHHHHH------TCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHhc------CCceEEECCCCCHHHHHHHHH
Confidence 4678999998643 344 4444443 67999999976555554433322 3578888887432 11
Q ss_pred hC--CCCCccEEEEcCCCCC-----CCccccch--------------HHHHHHHHHhcCCCcEEEEec
Q 020933 195 AV--PEGTYDAVIVDSSDPI-----GPAQELFE--------------KPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 195 ~~--~~~~fDvIi~D~~~~~-----~~~~~l~~--------------~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.. .-++.|++|.+.-... .+...... ..+.+.+...|+.+|.++..+
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 11 1257999998664321 11111111 123456667777888777543
No 416
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.05 E-value=2.1 Score=41.05 Aligned_cols=126 Identities=16% Similarity=0.206 Sum_probs=71.1
Q ss_pred CCceeeEeeccccHHH--HHHHhcCCCceEEEEECChHHHHHHHhccccc-cCCCC--------CCCeEEEEcChHHHHH
Q 020933 126 NPKKVLVIGGGDGGVL--REVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-AVGFE--------DPRVTLHIGDGVAFLK 194 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~--~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~-~~~~~--------~~~v~v~~~D~~~~l~ 194 (319)
..-+|-.||.|.=+.. ..+++.. -+|+++|+|++.++..++..... ..++. ..++++ ..|..+.+
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G--~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~- 82 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFG--HEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV- 82 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH-
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH-
Confidence 4568999999975544 3345542 58999999999888776531110 00000 123443 34544443
Q ss_pred hCCCCCccEEEEcCCCCC----CCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhc
Q 020933 195 AVPEGTYDAVIVDSSDPI----GPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIF 262 (319)
Q Consensus 195 ~~~~~~fDvIi~D~~~~~----~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F 262 (319)
...|+||+-.+.|. +.+.--+-.+.++.+.+.|++|-+++..+.. .....+.+.+.+.+..
T Consensus 83 ----~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv---~pgtt~~l~~~l~e~~ 147 (446)
T 4a7p_A 83 ----KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTV---PVGTGDEVERIIAEVA 147 (446)
T ss_dssp ----TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCC---CTTHHHHHHHHHHHHS
T ss_pred ----hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCC---CchHHHHHHHHHHHhC
Confidence 23599998765553 2111112456678888899988877765422 2233444444555443
No 417
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.86 E-value=0.13 Score=46.81 Aligned_cols=91 Identities=20% Similarity=0.250 Sum_probs=57.2
Q ss_pred eeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEc-Ch-HHHHHhCCCCCccEE
Q 020933 129 KVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG-DG-VAFLKAVPEGTYDAV 204 (319)
Q Consensus 129 ~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~-D~-~~~l~~~~~~~fDvI 204 (319)
+||++|+ |.|..+.++++..+ .+|++++.+++-++.+++. .. + .++.. |. .+.++......+|+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~~~~~~~~~l-Ga------~---~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNREAADYLKQL-GA------S---EVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSSTHHHHHHH-TC------S---EEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc-CC------c---EEEECCCchHHHHHHhhcCCccEE
Confidence 8999996 45667777777654 4799999998888888763 11 1 11111 10 011111113469998
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|-... . +.++.+.+.|+++|.+++-.
T Consensus 222 id~~g----------~-~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 222 VDPVG----------G-KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EESCC----------T-HHHHHHHTTEEEEEEEEECC
T ss_pred EECCc----------H-HHHHHHHHhhcCCCEEEEEe
Confidence 74322 1 35788889999999998753
No 418
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=89.62 E-value=3.5 Score=34.93 Aligned_cols=72 Identities=8% Similarity=0.171 Sum_probs=45.3
Q ss_pred ceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH------HHHhCCCC
Q 020933 128 KKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA------FLKAVPEG 199 (319)
Q Consensus 128 ~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~------~l~~~~~~ 199 (319)
++||+.|++ |++++.+++. ....+|++++.+++-++...+.+. .++.++..|..+ .++.. .+
T Consensus 2 k~vlVTGas-~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~-~~ 71 (230)
T 3guy_A 2 SLIVITGAS-SGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS--------NNVGYRARDLASHQEVEQLFEQL-DS 71 (230)
T ss_dssp -CEEEESTT-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS--------SCCCEEECCTTCHHHHHHHHHSC-SS
T ss_pred CEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--------hccCeEeecCCCHHHHHHHHHHH-hh
Confidence 467888876 4455555442 113579999999987776665442 367778877653 23332 45
Q ss_pred CccEEEEcCC
Q 020933 200 TYDAVIVDSS 209 (319)
Q Consensus 200 ~fDvIi~D~~ 209 (319)
.+|++|.+..
T Consensus 72 ~~d~lv~~Ag 81 (230)
T 3guy_A 72 IPSTVVHSAG 81 (230)
T ss_dssp CCSEEEECCC
T ss_pred cCCEEEEeCC
Confidence 6799997654
No 419
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=89.32 E-value=1.5 Score=40.39 Aligned_cols=108 Identities=13% Similarity=0.154 Sum_probs=65.8
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECC-hHHHHHHHhccccccC-----C------------CCCCCeEEEEc
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEID-KMVVDVSKQFFPDVAV-----G------------FEDPRVTLHIG 187 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid-~~vi~~ak~~~~~~~~-----~------------~~~~~v~v~~~ 187 (319)
....|+.||||.......+....+ .++.+|+| |++++.-++.++.... + +..++.+++-.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~--~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFP--HLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCT--TEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCC--CCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 346899999999999888876533 46677777 9999988777654310 0 01257888888
Q ss_pred ChHH--HH----HhCC-CCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEE
Q 020933 188 DGVA--FL----KAVP-EGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVS 238 (319)
Q Consensus 188 D~~~--~l----~~~~-~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv 238 (319)
|.++ ++ .... .....++++..--..-++.. ...+++.+.+.+ |+|.++
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~--~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNE--SQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHH--HHHHHHHHHHHC-SSEEEE
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHH--HHHHHHHHHhhC-CCcEEE
Confidence 8875 32 2221 13455666543322222211 345677777766 666654
No 420
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=89.23 E-value=0.52 Score=42.06 Aligned_cols=103 Identities=18% Similarity=0.281 Sum_probs=61.9
Q ss_pred ceeeEeeccccH--HHHHHHhcCCCceEEEEECChHHHHHHHhcccccc------C-CCCC-------CCeEEEEcChHH
Q 020933 128 KKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVA------V-GFED-------PRVTLHIGDGVA 191 (319)
Q Consensus 128 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~------~-~~~~-------~~v~v~~~D~~~ 191 (319)
++|.+||+|.-+ ++..+++.. .+|+++|.+++.++.+++.+.... . .... .+++. ..|..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG--FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence 689999998643 334444442 589999999998887776531100 0 0000 12232 344333
Q ss_pred HHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 192 FLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 192 ~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
.+ ...|+||...+... -...++++.+...++|+.+++.++.+
T Consensus 82 ~~-----~~aDlVi~av~~~~-----~~~~~v~~~l~~~~~~~~il~s~tS~ 123 (283)
T 4e12_A 82 AV-----KDADLVIEAVPESL-----DLKRDIYTKLGELAPAKTIFATNSST 123 (283)
T ss_dssp HT-----TTCSEEEECCCSCH-----HHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred Hh-----ccCCEEEEeccCcH-----HHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 32 35799997654321 12457888999999998888766543
No 421
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=89.21 E-value=0.37 Score=44.22 Aligned_cols=47 Identities=15% Similarity=0.064 Sum_probs=39.5
Q ss_pred CCCceeeEeeccccHHHHHHHhcCCCceEEEEECCh---HHHHHHHhccccc
Q 020933 125 PNPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDK---MVVDVSKQFFPDV 173 (319)
Q Consensus 125 ~~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~---~vi~~ak~~~~~~ 173 (319)
.....|||--||+|..+.++.+.. .+.+++|+++ ..++++++++...
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCCEEEecCCCCCHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHHHc
Confidence 456789999999999999988874 6899999999 9999999988654
No 422
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=89.19 E-value=0.47 Score=41.76 Aligned_cols=33 Identities=21% Similarity=0.449 Sum_probs=22.8
Q ss_pred CceeeEeeccc-cH-HHHHHHhcCCCceEEEEECCh
Q 020933 127 PKKVLVIGGGD-GG-VLREVSRHSSVEKIDICEIDK 160 (319)
Q Consensus 127 ~~~VL~IG~G~-G~-~~~~l~~~~~~~~v~~VEid~ 160 (319)
.++||++|+|. |. ++..|++. +..+|+.+|.|.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 46999999874 32 23334444 567999999996
No 423
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=88.81 E-value=0.7 Score=41.69 Aligned_cols=64 Identities=19% Similarity=0.293 Sum_probs=43.4
Q ss_pred CCccEEEEcCCCCCCCcc-c-------cchHHHHHHHHHhcCCCcEEEEecCCcccCh-HHHHHHHHHHHhhcCCcee
Q 020933 199 GTYDAVIVDSSDPIGPAQ-E-------LFEKPFFESVAKALRPGGVVSTQAESIWLHM-HIIEDIVANCRQIFKGSVN 267 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~~-~-------l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~-~~~~~~~~~l~~~F~~~v~ 267 (319)
++||+|++|...+..... . .... ..+...++|+|||.|++-. |... ...+.++..+++.|. .+.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~L-al~fA~~vLkPGGtfV~Kv---yggaDr~se~lv~~LaR~F~-~Vr 277 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSM-LTKKACLHLNPGGTCVSIG---YGYADRASESIIGAIARQFK-FSR 277 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHH-THHHHGGGEEEEEEEEEEE---CCCCSHHHHHHHHHHHTTEE-EEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHH-HHHHHHHhcCCCceEEEEE---ecCCcccHHHHHHHHHHhcc-eee
Confidence 679999999876543211 1 1111 4566678999999999864 3333 356888899999994 444
No 424
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=88.67 E-value=0.54 Score=43.37 Aligned_cols=94 Identities=7% Similarity=0.055 Sum_probs=57.1
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcC-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEc-C-hHHHHHhCC-CC
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHS-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIG-D-GVAFLKAVP-EG 199 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~-D-~~~~l~~~~-~~ 199 (319)
....+||++|+|. |..+.++++.. + .+|++++.+++-++.+++.-. + .++.- + ..+.+.+.. ..
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~G-a~Vi~~~~~~~~~~~~~~lGa-------~---~vi~~~~~~~~~v~~~~~g~ 253 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTP-ATVIALDVKEEKLKLAERLGA-------D---HVVDARRDPVKQVMELTRGR 253 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESSHHHHHHHHHTTC-------S---EEEETTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHHHhCC-------C---EEEeccchHHHHHHHHhCCC
Confidence 4567999999753 44566677765 4 489999999999998886421 1 11111 1 122333222 23
Q ss_pred CccEEEEcCCCCCCCccccchHH--HHHHHHHhcCCCcEEEEec
Q 020933 200 TYDAVIVDSSDPIGPAQELFEKP--FFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 200 ~fDvIi~D~~~~~~~~~~l~~~~--f~~~~~~~LkpgG~lv~~~ 241 (319)
.+|+||-.... .+ .++...+. ++|.+++-.
T Consensus 254 g~Dvvid~~G~----------~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 254 GVNVAMDFVGS----------QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp CEEEEEESSCC----------HHHHHHGGGGEE--EEEEEEECC
T ss_pred CCcEEEECCCC----------chHHHHHHHhhc--CCCEEEEEe
Confidence 79999843221 12 45666666 899988753
No 425
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.53 E-value=2.3 Score=41.39 Aligned_cols=89 Identities=20% Similarity=0.282 Sum_probs=53.8
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccE
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDA 203 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDv 203 (319)
..+++|+++|+|. |......++..+ .+|+++|.++.-.+.+++. + +++ .+..+.+ ...|+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~~------G-----a~~--~~l~e~l-----~~aDv 332 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQG-ARVSVTEIDPINALQAMME------G-----FDV--VTVEEAI-----GDADI 332 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHT------T-----CEE--CCHHHHG-----GGCSE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHc------C-----CEE--ecHHHHH-----hCCCE
Confidence 3578999999875 333334445444 4899999999887776643 1 121 2333333 35799
Q ss_pred EEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 204 VIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 204 Ii~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+..... .++... ...+.||+||+++...
T Consensus 333 Vi~atgt-----~~~i~~----~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 333 VVTATGN-----KDIIML----EHIKAMKDHAILGNIG 361 (494)
T ss_dssp EEECSSS-----SCSBCH----HHHHHSCTTCEEEECS
T ss_pred EEECCCC-----HHHHHH----HHHHhcCCCcEEEEeC
Confidence 9865322 122232 3455689999987543
No 426
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.40 E-value=5.9 Score=33.76 Aligned_cols=78 Identities=13% Similarity=0.096 Sum_probs=48.7
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
+.++||+.|++. ++++.++++ ....+|++++.++.-.+...+.+... ..++.++..|..+. ++..
T Consensus 4 ~~k~vlITGas~-gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (247)
T 3lyl_A 4 NEKVALVTGASR-GIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK-----GFKARGLVLNISDIESIQNFFAEIK 77 (247)
T ss_dssp TTCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 356788888654 455544432 11368999999988777665554432 35788898887532 2111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
..++.|++|.+.-
T Consensus 78 ~~~~~id~li~~Ag 91 (247)
T 3lyl_A 78 AENLAIDILVNNAG 91 (247)
T ss_dssp HTTCCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1357899998654
No 427
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=88.33 E-value=3.9 Score=35.43 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=49.3
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..+.||+.|++. ++++.+++. ....+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 5 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 5 KEKVVIITGGSS-GMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-----PGQILTVQMDVRNTDDIQKMIEQID 78 (257)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-----TTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 356788888654 455554432 11368999999998877666655432 34788999887542 1111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-+..|++|.+.-
T Consensus 79 ~~~g~id~lv~nAg 92 (257)
T 3imf_A 79 EKFGRIDILINNAA 92 (257)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0247899998664
No 428
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.30 E-value=1.8 Score=36.57 Aligned_cols=96 Identities=19% Similarity=0.211 Sum_probs=57.7
Q ss_pred eeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH--HHHhCCCCCccEE
Q 020933 129 KVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTYDAV 204 (319)
Q Consensus 129 ~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~--~l~~~~~~~fDvI 204 (319)
+|+++|+|. ++..+++. ....+|+++|.|++.++...+.. .+.++.+|+.+ .+....-...|+|
T Consensus 2 ~iiIiG~G~--~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----------~~~~i~gd~~~~~~l~~a~i~~ad~v 69 (218)
T 3l4b_C 2 KVIIIGGET--TAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----------KATIIHGDGSHKEILRDAEVSKNDVV 69 (218)
T ss_dssp CEEEECCHH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----------SSEEEESCTTSHHHHHHHTCCTTCEE
T ss_pred EEEEECCCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----------CCeEEEcCCCCHHHHHhcCcccCCEE
Confidence 689999754 44443331 11357999999999887644321 35688888764 3433223578999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
++-..+.. ...+.....+.+.+...++....+
T Consensus 70 i~~~~~d~-------~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 70 VILTPRDE-------VNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp EECCSCHH-------HHHHHHHHHHHTSCCCEEEECCCS
T ss_pred EEecCCcH-------HHHHHHHHHHHHcCCCeEEEEEeC
Confidence 96544311 223445555666677777665443
No 429
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.27 E-value=0.87 Score=44.18 Aligned_cols=103 Identities=21% Similarity=0.262 Sum_probs=63.3
Q ss_pred CceeeEeeccccH--HHHHHHhcCCCceEEEEECChHHHHHHHhccccc----c-CCCCC--------CCeEEEEcChHH
Q 020933 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV----A-VGFED--------PRVTLHIGDGVA 191 (319)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~----~-~~~~~--------~~v~v~~~D~~~ 191 (319)
-++|-+||+|.-+ ++..+++.. .+|+++|++++.++.+++.+... . .+.-. .+++.. .|. +
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~-~ 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHG--HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDI-H 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCG-G
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCH-H
Confidence 3589999998733 445555553 57999999999998877642111 0 00000 134332 332 2
Q ss_pred HHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 192 FLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 192 ~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
-+ ...|+||.-.+... -...++|+.+...++|+.+++.++.+
T Consensus 81 ~~-----~~aDlVIeAVpe~~-----~vk~~v~~~l~~~~~~~~IlasntSt 122 (483)
T 3mog_A 81 AL-----AAADLVIEAASERL-----EVKKALFAQLAEVCPPQTLLTTNTSS 122 (483)
T ss_dssp GG-----GGCSEEEECCCCCH-----HHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred Hh-----cCCCEEEEcCCCcH-----HHHHHHHHHHHHhhccCcEEEecCCC
Confidence 22 34699997654321 12457889999999999998877644
No 430
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=88.18 E-value=1.7 Score=39.52 Aligned_cols=112 Identities=9% Similarity=0.066 Sum_probs=68.7
Q ss_pred CceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH-HHHhCCCCCcc---
Q 020933 127 PKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA-FLKAVPEGTYD--- 202 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~-~l~~~~~~~fD--- 202 (319)
++.|++||||-=.....+.. +...++.-|| .|.+++..++.+.... .....+..++..|.++ ++.......||
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~-~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHG-VTPTADRREVPIDLRQDWPPALRSAGFDPSA 179 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTT-CCCSSEEEEEECCTTSCHHHHHHHTTCCTTS
T ss_pred CCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcC-CCCCCCeEEEecchHhhHHHHHHhccCCCCC
Confidence 45799999998777555542 2235666677 5999999998886431 1134678999999874 32221112232
Q ss_pred --EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 203 --AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 203 --vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
++++..--..-+.. ....+++.+...+.||+.+++...+
T Consensus 180 Pt~~i~Egvl~Yl~~~--~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPAT--AQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp CEEEEECSCGGGSCHH--HHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CEEEEEechHhhCCHH--HHHHHHHHHHHhCCCCeEEEEEecC
Confidence 33332222222211 1356888888888999999987543
No 431
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=88.11 E-value=4.6 Score=30.16 Aligned_cols=78 Identities=21% Similarity=0.221 Sum_probs=49.3
Q ss_pred CceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHH
Q 020933 150 VEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAK 229 (319)
Q Consensus 150 ~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~ 229 (319)
..+|..||-++...+..++.+... + -.+ ....++.+.+.......+|+|++|..-+... ..++++.+++
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~--g---~~v-~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~-----g~~~~~~l~~ 75 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSL--G---ATT-VLAADGVDALELLGGFTPDLMICDIAMPRMN-----GLKLLEHIRN 75 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHT--T---CEE-EEESCHHHHHHHHTTCCCSEEEECCC----------CHHHHHHHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhC--C---ceE-EEeCCHHHHHHHHhcCCCCEEEEecCCCCCC-----HHHHHHHHHh
Confidence 458999999999998888877654 1 123 2356776666544456799999997654322 3467777776
Q ss_pred hcCCCc-EEEE
Q 020933 230 ALRPGG-VVST 239 (319)
Q Consensus 230 ~LkpgG-~lv~ 239 (319)
.- |+. ++++
T Consensus 76 ~~-~~~~ii~~ 85 (130)
T 3eod_A 76 RG-DQTPVLVI 85 (130)
T ss_dssp TT-CCCCEEEE
T ss_pred cC-CCCCEEEE
Confidence 43 444 4444
No 432
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=88.10 E-value=1.7 Score=39.21 Aligned_cols=98 Identities=11% Similarity=0.217 Sum_probs=60.2
Q ss_pred CCCceeeEeecccc--HHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCcc
Q 020933 125 PNPKKVLVIGGGDG--GVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYD 202 (319)
Q Consensus 125 ~~~~~VL~IG~G~G--~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fD 202 (319)
...++|-.||+|.- +++..++ . ..+|+++|.+++.++.+++.+... .-.++++. .|..+ + ..-|
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~l~~~----~~~~i~~~-~~~~~-~-----~~aD 75 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQIPEE----LLSKIEFT-TTLEK-V-----KDCD 75 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHSCGG----GGGGEEEE-SSCTT-G-----GGCS
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHHHHHH----HhCCeEEe-CCHHH-H-----cCCC
Confidence 34679999999963 3455566 4 358999999999999887763110 00134432 34322 2 2469
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
+||.-.++... ....+|+.+... ||.+++.++.+
T Consensus 76 lVieavpe~~~-----vk~~l~~~l~~~--~~~IlasntSt 109 (293)
T 1zej_A 76 IVMEAVFEDLN-----TKVEVLREVERL--TNAPLCSNTSV 109 (293)
T ss_dssp EEEECCCSCHH-----HHHHHHHHHHTT--CCSCEEECCSS
T ss_pred EEEEcCcCCHH-----HHHHHHHHHhcC--CCCEEEEECCC
Confidence 99976655321 134667776655 88888777644
No 433
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=88.09 E-value=1.4 Score=41.13 Aligned_cols=116 Identities=9% Similarity=0.079 Sum_probs=71.2
Q ss_pred CCceeeEeeccccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEE
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVI 205 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi 205 (319)
...+||+|+-+.|.++..++.+. ++.+.=+-......+.++..+ ++...++++... ++.. ...||+|+
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~--~~~~~~~~~~~~-----~~~~-~~~~~~v~ 105 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLN--GIDESSVKFLDS-----TADY-PQQPGVVL 105 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHT--TCCGGGSEEEET-----TSCC-CSSCSEEE
T ss_pred CCCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHc--CCCccceEeccc-----cccc-ccCCCEEE
Confidence 34689999999999999987652 345543333334555666544 344445666533 2222 57899999
Q ss_pred EcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhc
Q 020933 206 VDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIF 262 (319)
Q Consensus 206 ~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F 262 (319)
+-.+..... ....++.+...|++|+.+++..... .....+.+.+.+.|
T Consensus 106 ~~lpk~~~~-----l~~~L~~l~~~l~~~~~i~~~g~~~----~~~~~~~~~l~~~~ 153 (375)
T 4dcm_A 106 IKVPKTLAL-----LEQQLRALRKVVTSDTRIIAGAKAR----DIHTSTLELFEKVL 153 (375)
T ss_dssp EECCSCHHH-----HHHHHHHHHTTCCTTSEEEEEEEGG----GCCHHHHHHHHHHT
T ss_pred EEcCCCHHH-----HHHHHHHHHhhCCCCCEEEEEeccc----chHHHHHHHHHhhc
Confidence 766542211 2356788889999999987754332 22244555555555
No 434
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.03 E-value=1.5 Score=39.37 Aligned_cols=101 Identities=17% Similarity=0.264 Sum_probs=59.9
Q ss_pred ceeeEeeccccH--HHHHHHhcCCCceEEEEECChHHHHHHHhcccc----c-cCC-CCC------------CCeEEEEc
Q 020933 128 KKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPD----V-AVG-FED------------PRVTLHIG 187 (319)
Q Consensus 128 ~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~----~-~~~-~~~------------~~v~v~~~ 187 (319)
++|.+||+|.-+ ++..+++.. .+|+++|.+++.++.+++.+.. . ..+ ... .++++ ..
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G--~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~~ 92 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG--HTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-ST 92 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-ES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-ec
Confidence 589999999744 444455553 5899999999988876543211 0 001 000 13333 23
Q ss_pred ChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 188 DGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 188 D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|..+.+ ...|+||.-.+.... ...++++.+...++++.+++.++
T Consensus 93 ~~~~~~-----~~aD~Vi~avp~~~~-----~~~~v~~~l~~~~~~~~iv~s~t 136 (302)
T 1f0y_A 93 DAASVV-----HSTDLVVEAIVENLK-----VKNELFKRLDKFAAEHTIFASNT 136 (302)
T ss_dssp CHHHHT-----TSCSEEEECCCSCHH-----HHHHHHHHHTTTSCTTCEEEECC
T ss_pred CHHHhh-----cCCCEEEEcCcCcHH-----HHHHHHHHHHhhCCCCeEEEECC
Confidence 433222 357999976543210 13467888888898888776554
No 435
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=87.99 E-value=4 Score=35.07 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=47.0
Q ss_pred CCceeeEeeccccHHHHHHHhc--C-CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH--HHhC----
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--S-SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF--LKAV---- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~-~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~--l~~~---- 196 (319)
+.++||+.|+ +|++++.+++. . ...+|++++.++.-.+...+.+... ..++.++..|..+. ++..
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE-----GLSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc-----CCeeEEEECCCCCHHHHHHHHHHH
Confidence 4567887775 46666665542 1 2368999999987665544444321 24688888887542 1110
Q ss_pred --CCCCccEEEEcCC
Q 020933 197 --PEGTYDAVIVDSS 209 (319)
Q Consensus 197 --~~~~fDvIi~D~~ 209 (319)
..+..|+||....
T Consensus 77 ~~~~g~id~li~~Ag 91 (276)
T 1wma_A 77 RKEYGGLDVLVNNAG 91 (276)
T ss_dssp HHHHSSEEEEEECCC
T ss_pred HHhcCCCCEEEECCc
Confidence 0137899997654
No 436
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.91 E-value=2 Score=39.15 Aligned_cols=103 Identities=10% Similarity=0.102 Sum_probs=62.7
Q ss_pred CceeeEeeccccH--HHHHHHhcCCCceEEEEECChHHHHHHHhccccc-----cCCCCC---------CCeEEEEcChH
Q 020933 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-----AVGFED---------PRVTLHIGDGV 190 (319)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~-----~~~~~~---------~~v~v~~~D~~ 190 (319)
.++|-+||+|.-+ ++..+++.. .+|+++|++++.++.+++..... ..++-. .++++. .|..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ 82 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHH
Confidence 3689999999643 444555553 47999999999988876542110 001111 134432 3433
Q ss_pred HHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecC
Q 020933 191 AFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAE 242 (319)
Q Consensus 191 ~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 242 (319)
+.+ ...|+||...+... -...++|+.+...++|+-+++.++.
T Consensus 83 eav-----~~aDlVieavpe~~-----~~k~~v~~~l~~~~~~~~Ii~s~tS 124 (319)
T 2dpo_A 83 EAV-----EGVVHIQECVPENL-----DLKRKIFAQLDSIVDDRVVLSSSSS 124 (319)
T ss_dssp HHT-----TTEEEEEECCCSCH-----HHHHHHHHHHHTTCCSSSEEEECCS
T ss_pred HHH-----hcCCEEEEeccCCH-----HHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 332 35799997664321 1245788999999999888876553
No 437
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=87.78 E-value=4 Score=31.59 Aligned_cols=78 Identities=17% Similarity=0.181 Sum_probs=51.2
Q ss_pred ceEEEEECChHHHHHHHhccccccCCCCCCCeE-EEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHH
Q 020933 151 EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVT-LHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAK 229 (319)
Q Consensus 151 ~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~-v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~ 229 (319)
.+|..||-|+...+..++.+... . .... ....++.+.+.......+|+||+|..-+... ..++++.+++
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~----~-~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~-----g~~~~~~l~~ 90 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQ----P-DVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKT-----GLEVLEWIRS 90 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTS----T-TEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSC-----HHHHHHHHHH
T ss_pred cEEEEEcCCHHHHHHHHHHHHhC----C-CcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCc-----HHHHHHHHHH
Confidence 57999999999999888877643 1 1233 3455666666544456799999997654432 3467777776
Q ss_pred hcCCCcEEEE
Q 020933 230 ALRPGGVVST 239 (319)
Q Consensus 230 ~LkpgG~lv~ 239 (319)
. .++-.+++
T Consensus 91 ~-~~~~~ii~ 99 (150)
T 4e7p_A 91 E-KLETKVVV 99 (150)
T ss_dssp T-TCSCEEEE
T ss_pred h-CCCCeEEE
Confidence 5 44544444
No 438
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=87.58 E-value=0.41 Score=43.96 Aligned_cols=95 Identities=9% Similarity=0.015 Sum_probs=56.2
Q ss_pred ceeeEeec--cccHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhC-CCCCccEE
Q 020933 128 KKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAV-PEGTYDAV 204 (319)
Q Consensus 128 ~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~-~~~~fDvI 204 (319)
+.||+.|+ |.|..+.++++..+ .+|++++.+++-++.+++.-. +.-+.....|..+.+.+. ....+|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEG-FRPIVTVRRDEQIALLKDIGA-------AHVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESCGGGHHHHHHHTC-------SEEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHcCC-------CEEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 46666532 23555666777655 489999999998888876421 100111112333333322 12469998
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
+-... .+.++.+.+.|+++|.+++-.
T Consensus 238 id~~g-----------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 238 LDAVT-----------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EESSC-----------HHHHHHHHHHSCTTCEEEECC
T ss_pred EECCC-----------ChhHHHHHhhhcCCCEEEEEe
Confidence 84322 123577889999999998753
No 439
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=87.48 E-value=5.4 Score=35.29 Aligned_cols=110 Identities=20% Similarity=0.239 Sum_probs=61.0
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChH-HHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKM-VVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~-vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~ 196 (319)
..++||+.|++. ++++.+++.. ...+|++++.++. ..+..++..... ..++.++..|..+. ++..
T Consensus 46 ~gk~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDS-GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE-----GVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT-----TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 456888888764 4555544421 1368999998865 334343333321 35788999987542 1111
Q ss_pred --CCCCccEEEEcCCCC--CCCccccc--------------hHHHHHHHHHhcCCCcEEEEec
Q 020933 197 --PEGTYDAVIVDSSDP--IGPAQELF--------------EKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 197 --~~~~fDvIi~D~~~~--~~~~~~l~--------------~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.-+..|++|.+.... ..+...+. .....+.+...|+.+|.++..+
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 024789999865422 11111111 1124556667788888776543
No 440
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=87.40 E-value=8.7 Score=36.31 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=57.9
Q ss_pred eeeEeeccccHH--HHHHHhcCCCceEEEEECChHHHHHHHhccccc-cCCCC--------CCCeEEEEcChHHHHHhCC
Q 020933 129 KVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-AVGFE--------DPRVTLHIGDGVAFLKAVP 197 (319)
Q Consensus 129 ~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~-~~~~~--------~~~v~v~~~D~~~~l~~~~ 197 (319)
+|.+||+|.-+. +..+++.. .+|+++|++++.++..++.-... ..+++ ..++++ ..|..+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G--~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~~--- 75 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARG--HEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAVL--- 75 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHHH---
T ss_pred EEEEECCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHhc---
Confidence 688999986443 34455543 47999999999888766531110 00000 113432 344433332
Q ss_pred CCCccEEEEcCCCCCCC---ccccchHHHHHHHHHhcCC---CcEEEE
Q 020933 198 EGTYDAVIVDSSDPIGP---AQELFEKPFFESVAKALRP---GGVVST 239 (319)
Q Consensus 198 ~~~fDvIi~D~~~~~~~---~~~l~~~~f~~~~~~~Lkp---gG~lv~ 239 (319)
..|+||+-.+.+... +.--+..+.++.+...|++ +.+++.
T Consensus 76 --~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~ 121 (436)
T 1mv8_A 76 --DSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVV 121 (436)
T ss_dssp --TCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEE
T ss_pred --cCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEE
Confidence 369999876554321 1111134667888888998 655554
No 441
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.38 E-value=8 Score=33.68 Aligned_cols=110 Identities=17% Similarity=0.090 Sum_probs=60.4
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECC------------hHHHHHHHhccccccCCCCCCCeEEEEcChHH
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEID------------KMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA 191 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid------------~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~ 191 (319)
..+.||+.|++. ++++++++. ....+|++++.+ ..-++...+.+... ..++.++..|..+
T Consensus 9 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGAR-GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-----GRKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-----TSCEEEEECCTTC
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-----CCceEEEEccCCC
Confidence 456888888765 455554432 113689999987 55555444433322 3578899988754
Q ss_pred H------HHhC--CCCCccEEEEcCCCCCCC---ccccc----------hHHHHHHHHHhcCCCcEEEEec
Q 020933 192 F------LKAV--PEGTYDAVIVDSSDPIGP---AQELF----------EKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 192 ~------l~~~--~~~~fDvIi~D~~~~~~~---~~~l~----------~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
. ++.. .-+..|++|.+.-..... ....+ .....+.+...|+.+|.++..+
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 2 1111 024789999865431111 00000 1123455667777888876543
No 442
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.36 E-value=6.4 Score=36.32 Aligned_cols=100 Identities=10% Similarity=0.076 Sum_probs=60.0
Q ss_pred CceeeEeeccccHH--HHHHHhcCCCceEEEEECChHHHHHHHhccccc--cCCCC-CCCeEEEEcChHHHHHhCCCCCc
Q 020933 127 PKKVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV--AVGFE-DPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 127 ~~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~--~~~~~-~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
..+|.+||+|.-+. +..+++.. .+|++++.+++.++..++.-... ..+.. .+++++ ..|..+.+ ...
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G--~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea~-----~~a 100 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG--QKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKASL-----EGV 100 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT--CCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHHH-----TTC
T ss_pred CCeEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHHH-----hcC
Confidence 35899999987443 33344442 57999999999887766532110 00111 123443 34544443 346
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+||+-.+.. ...+.++.+...|+++-+++..+
T Consensus 101 DvVilaVp~~-------~~~~vl~~i~~~l~~~~ivvs~~ 133 (356)
T 3k96_A 101 TDILIVVPSF-------AFHEVITRMKPLIDAKTRIAWGT 133 (356)
T ss_dssp CEEEECCCHH-------HHHHHHHHHGGGCCTTCEEEECC
T ss_pred CEEEECCCHH-------HHHHHHHHHHHhcCCCCEEEEEe
Confidence 9999765431 25678888888998887665443
No 443
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.30 E-value=4.5 Score=35.14 Aligned_cols=79 Identities=15% Similarity=0.143 Sum_probs=49.3
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..++||+.|++ |++++.+++.. ...+|++++.+++-++...+.+... ...++.++..|..+. ++..
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL----GSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----SSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45678888765 44555554421 1358999999988777665555432 225789999987542 1110
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-+..|++|.+.-
T Consensus 84 ~~~g~id~lvnnAg 97 (262)
T 3pk0_A 84 EEFGGIDVVCANAG 97 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 0247899998654
No 444
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=87.29 E-value=1.9 Score=44.04 Aligned_cols=102 Identities=21% Similarity=0.247 Sum_probs=65.1
Q ss_pred ceeeEeeccccHHHHH--HHhcCCCceEEEEECChHHHHHHHhcccccc---------CCC--CCCCeEEEEcChHHHHH
Q 020933 128 KKVLVIGGGDGGVLRE--VSRHSSVEKIDICEIDKMVVDVSKQFFPDVA---------VGF--EDPRVTLHIGDGVAFLK 194 (319)
Q Consensus 128 ~~VL~IG~G~G~~~~~--l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~---------~~~--~~~~v~v~~~D~~~~l~ 194 (319)
++|-+||+|+-+.... ++.. ...|+.+|++++.++.+++.....- ... ...++++ ..|.. -+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a--G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~-~l- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTK-EL- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESCGG-GG-
T ss_pred cEEEEEcccHHHHHHHHHHHhC--CCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCcHH-HH-
Confidence 6899999998654443 4444 4689999999999988877543210 000 1122222 22322 22
Q ss_pred hCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 195 AVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 195 ~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
...|+||=-.+... -..+++|+++-++++|+-+|..|+.+
T Consensus 392 ----~~aDlVIEAV~E~l-----~iK~~vf~~le~~~~~~aIlASNTSs 431 (742)
T 3zwc_A 392 ----STVDLVVEAVFEDM-----NLKKKVFAELSALCKPGAFLCTNTSA 431 (742)
T ss_dssp ----GSCSEEEECCCSCH-----HHHHHHHHHHHHHSCTTCEEEECCSS
T ss_pred ----hhCCEEEEeccccH-----HHHHHHHHHHhhcCCCCceEEecCCc
Confidence 34689884433321 22678999999999999999998755
No 445
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=87.19 E-value=1.3 Score=39.18 Aligned_cols=79 Identities=14% Similarity=0.154 Sum_probs=49.0
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH---HHhC----
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF---LKAV---- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~---l~~~---- 196 (319)
..+.||+.|++ |++++++++.. ...+|++++.++.-.+.+.+.+... ...++.++..|..+. ++..
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS----NHENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----TCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEEccCCCcHHHHHHHHHHH
Confidence 45678888876 44555544421 1368999999988766555554432 235799999887543 1111
Q ss_pred --CCCCccEEEEcCC
Q 020933 197 --PEGTYDAVIVDSS 209 (319)
Q Consensus 197 --~~~~fDvIi~D~~ 209 (319)
..+..|++|.++-
T Consensus 86 ~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 86 KTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHhCCCCCEEEECCc
Confidence 0257999998764
No 446
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.12 E-value=8.9 Score=36.63 Aligned_cols=106 Identities=12% Similarity=0.186 Sum_probs=58.7
Q ss_pred ceeeEeeccccHH--HHHHHhcCCCceEEEEECChHHHHHHHhccccc-cCCC-------CCCCeEEEEcChHHHHHhCC
Q 020933 128 KKVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDVSKQFFPDV-AVGF-------EDPRVTLHIGDGVAFLKAVP 197 (319)
Q Consensus 128 ~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~-~~~~-------~~~~v~v~~~D~~~~l~~~~ 197 (319)
.+|.+||+|.-+. +..+++..+..+|+++|++++.++..++.-... ..++ ...++++ ..|..+.+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~--- 81 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIK--- 81 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHH---
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHh---
Confidence 4899999986543 444555532357999999999887654421100 0000 0012332 344333333
Q ss_pred CCCccEEEEcCCCCCCCc-------ccc-chHHHHHHHHHhcCCCcEEEE
Q 020933 198 EGTYDAVIVDSSDPIGPA-------QEL-FEKPFFESVAKALRPGGVVST 239 (319)
Q Consensus 198 ~~~fDvIi~D~~~~~~~~-------~~l-~~~~f~~~~~~~LkpgG~lv~ 239 (319)
..|+||+-.+.+.... ..+ +..+..+.+...|++|.+++.
T Consensus 82 --~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~ 129 (467)
T 2q3e_A 82 --EADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTE 129 (467)
T ss_dssp --HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEE
T ss_pred --cCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEE
Confidence 3599998765543211 111 124566778888888766654
No 447
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=86.98 E-value=2.8 Score=37.46 Aligned_cols=79 Identities=16% Similarity=0.177 Sum_probs=48.5
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..++||+.|++. ++++.+++. ....+|++++.+++-++...+.+... ...++.++..|..+. ++..
T Consensus 40 ~~k~vlVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGTK-GIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL----GAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS----SSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh----CCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 456788777754 455554432 11358999999987766555554432 225788999988543 1111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-+..|++|.+.-
T Consensus 115 ~~~g~iD~lvnnAg 128 (293)
T 3rih_A 115 DAFGALDVVCANAG 128 (293)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1257899998654
No 448
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=86.94 E-value=4.9 Score=34.64 Aligned_cols=79 Identities=15% Similarity=0.168 Sum_probs=47.2
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcCh--HH------HHHh
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG--VA------FLKA 195 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~--~~------~l~~ 195 (319)
+.+.||+.|++. ++++.+++.. ...+|++++.+++-++...+.+... ...++.++..|. .+ .++.
T Consensus 11 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 11 NDRIILVTGASD-GIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE----TGRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----HSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----cCCCceEEEEecccCCHHHHHHHHHH
Confidence 456788888654 4555544421 1368999999988776655544332 123677888886 21 1111
Q ss_pred C--CCCCccEEEEcCC
Q 020933 196 V--PEGTYDAVIVDSS 209 (319)
Q Consensus 196 ~--~~~~fDvIi~D~~ 209 (319)
. ..++.|++|.+.-
T Consensus 86 ~~~~~g~id~lv~nAg 101 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAG 101 (252)
T ss_dssp HHHHCSCCSEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1 1357999998664
No 449
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=86.89 E-value=5.5 Score=33.20 Aligned_cols=67 Identities=18% Similarity=0.090 Sum_probs=43.8
Q ss_pred eeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH---HHHhCCCCCccE
Q 020933 129 KVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA---FLKAVPEGTYDA 203 (319)
Q Consensus 129 ~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~---~l~~~~~~~fDv 203 (319)
+||+.|+ +|.++..+++. ....+|++++.++.- ... .++++++.+|..+ .+... -+..|+
T Consensus 2 ~ilItGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~-------~~~------~~~~~~~~~D~~d~~~~~~~~-~~~~d~ 66 (219)
T 3dqp_A 2 KIFIVGS-TGRVGKSLLKSLSTTDYQIYAGARKVEQ-------VPQ------YNNVKAVHFDVDWTPEEMAKQ-LHGMDA 66 (219)
T ss_dssp EEEEEST-TSHHHHHHHHHHTTSSCEEEEEESSGGG-------SCC------CTTEEEEECCTTSCHHHHHTT-TTTCSE
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCccc-------hhh------cCCceEEEecccCCHHHHHHH-HcCCCE
Confidence 6888885 46677766553 123689999988642 111 1579999999876 34333 356999
Q ss_pred EEEcCCC
Q 020933 204 VIVDSSD 210 (319)
Q Consensus 204 Ii~D~~~ 210 (319)
||.....
T Consensus 67 vi~~ag~ 73 (219)
T 3dqp_A 67 IINVSGS 73 (219)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9976543
No 450
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=86.77 E-value=6.6 Score=34.49 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=50.1
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
+.|.+|+-|++.| +++.+++. ....+|..++.+++-++...+.+... ..++..+..|..+. ++..
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~-----g~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM-----GKEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4567777776654 55555442 12368999999998887666665543 35788888887432 1111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-++.|++|.+.-
T Consensus 80 ~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 80 ETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCc
Confidence 1267899998763
No 451
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=86.69 E-value=5.7 Score=34.85 Aligned_cols=78 Identities=17% Similarity=0.133 Sum_probs=48.0
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
.++.||+.|++. ++++++++.. ...+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 23 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 23 RPQTAFVTGVSS-GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA-----GHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp --CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 356788888664 4555544321 1368999999988777665555432 35788999887542 1111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-++.|++|.+.-
T Consensus 97 ~~~g~id~lv~nAg 110 (279)
T 3sju_A 97 ERFGPIGILVNSAG 110 (279)
T ss_dssp HHHCSCCEEEECCC
T ss_pred HHcCCCcEEEECCC
Confidence 0247899998664
No 452
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=86.44 E-value=4.5 Score=34.96 Aligned_cols=78 Identities=15% Similarity=0.111 Sum_probs=48.8
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..+.||+.|++.| +++.+++. ....+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA-----GGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEECcCCCHHHHHHHHHHHH
Confidence 4567888887654 55554432 11358999999988766655554432 35788999887432 1111
Q ss_pred CCCCccEEEEcCC
Q 020933 197 PEGTYDAVIVDSS 209 (319)
Q Consensus 197 ~~~~fDvIi~D~~ 209 (319)
..+..|++|.+.-
T Consensus 80 ~~g~id~lv~nAg 92 (252)
T 3h7a_A 80 AHAPLEVTIFNVG 92 (252)
T ss_dssp HHSCEEEEEECCC
T ss_pred hhCCceEEEECCC
Confidence 0157899998664
No 453
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=86.42 E-value=5.3 Score=35.56 Aligned_cols=78 Identities=12% Similarity=0.160 Sum_probs=49.8
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..+.||+.|++. ++++++++. ....+|++++.++.-++...+.+... ..++.++..|..+. ++..
T Consensus 30 ~gk~vlVTGas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 30 DGRAAVVTGGAS-GIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ-----GFDAHGVVCDVRHLDEMVRLADEAF 103 (301)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence 457888888764 455554432 11368999999998877666655432 34788899887542 1110
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
..+..|++|.++-
T Consensus 104 ~~~g~id~lvnnAg 117 (301)
T 3tjr_A 104 RLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHSSCSEEEECCC
T ss_pred HhCCCCCEEEECCC
Confidence 0247899998764
No 454
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.31 E-value=6.4 Score=35.14 Aligned_cols=87 Identities=10% Similarity=0.098 Sum_probs=50.5
Q ss_pred CCceeeEeeccccHHHHHH---HhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE-cChHHHHHhCCCCCc
Q 020933 126 NPKKVLVIGGGDGGVLREV---SRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-GDGVAFLKAVPEGTY 201 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l---~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~-~D~~~~l~~~~~~~f 201 (319)
.+++|++||+|. +++.+ ++..+ .+|+++|.++.-.+.+++. .++.+. .+..+. -...
T Consensus 156 ~g~~v~IiG~G~--iG~~~a~~l~~~G-~~V~~~d~~~~~~~~~~~~-----------g~~~~~~~~l~~~-----l~~a 216 (300)
T 2rir_A 156 HGSQVAVLGLGR--TGMTIARTFAALG-ANVKVGARSSAHLARITEM-----------GLVPFHTDELKEH-----VKDI 216 (300)
T ss_dssp TTSEEEEECCSH--HHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-----------TCEEEEGGGHHHH-----STTC
T ss_pred CCCEEEEEcccH--HHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHC-----------CCeEEchhhHHHH-----hhCC
Confidence 568999999864 33333 33334 4899999998765544331 122222 222222 2468
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+|+...+.. +...+ ..+.+|||++++-.+
T Consensus 217 DvVi~~~p~~------~i~~~----~~~~mk~g~~lin~a 246 (300)
T 2rir_A 217 DICINTIPSM------ILNQT----VLSSMTPKTLILDLA 246 (300)
T ss_dssp SEEEECCSSC------CBCHH----HHTTSCTTCEEEECS
T ss_pred CEEEECCChh------hhCHH----HHHhCCCCCEEEEEe
Confidence 9999776542 33333 346789988776433
No 455
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=86.17 E-value=5.5 Score=35.99 Aligned_cols=70 Identities=17% Similarity=0.258 Sum_probs=40.9
Q ss_pred CCceeeEeeccccHH--HHHHH-hcCCCceE-EEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCc
Q 020933 126 NPKKVLVIGGGDGGV--LREVS-RHSSVEKI-DICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~--~~~l~-~~~~~~~v-~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
++.+|.+||+|.-+. +..+. +.. ..++ .++|.+++..+...+.+. .+ ....|..+.+. +...
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~-~~~~vav~d~~~~~~~~~a~~~g-------~~---~~~~~~~~~l~---~~~~ 72 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQ-GVKLVAACALDSNQLEWAKNELG-------VE---TTYTNYKDMID---TENI 72 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCS-SEEEEEEECSCHHHHHHHHHTTC-------CS---EEESCHHHHHT---TSCC
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCC-CcEEEEEecCCHHHHHHHHHHhC-------CC---cccCCHHHHhc---CCCC
Confidence 456999999986332 33344 333 3454 457999987764443322 11 12356666653 3468
Q ss_pred cEEEEcCC
Q 020933 202 DAVIVDSS 209 (319)
Q Consensus 202 DvIi~D~~ 209 (319)
|+|++-.+
T Consensus 73 D~V~i~tp 80 (346)
T 3cea_A 73 DAIFIVAP 80 (346)
T ss_dssp SEEEECSC
T ss_pred CEEEEeCC
Confidence 99987544
No 456
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=86.17 E-value=7 Score=34.78 Aligned_cols=87 Identities=13% Similarity=0.046 Sum_probs=50.0
Q ss_pred CCceeeEeeccccHHHHHH---HhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEE-cChHHHHHhCCCCCc
Q 020933 126 NPKKVLVIGGGDGGVLREV---SRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHI-GDGVAFLKAVPEGTY 201 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l---~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~-~D~~~~l~~~~~~~f 201 (319)
.+++|++||+|. +++.+ ++..+ .+|+++|.++.-.+.+++. .++.+. .+..+. -...
T Consensus 154 ~g~~v~IiG~G~--iG~~~a~~l~~~G-~~V~~~dr~~~~~~~~~~~-----------g~~~~~~~~l~~~-----l~~a 214 (293)
T 3d4o_A 154 HGANVAVLGLGR--VGMSVARKFAALG-AKVKVGARESDLLARIAEM-----------GMEPFHISKAAQE-----LRDV 214 (293)
T ss_dssp TTCEEEEECCSH--HHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHT-----------TSEEEEGGGHHHH-----TTTC
T ss_pred CCCEEEEEeeCH--HHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHC-----------CCeecChhhHHHH-----hcCC
Confidence 568999999864 33333 33344 4899999998765544321 122221 222222 2468
Q ss_pred cEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 202 DAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 202 DvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+|+...+. ++...+. .+.+|||++++-.+
T Consensus 215 DvVi~~~p~------~~i~~~~----l~~mk~~~~lin~a 244 (293)
T 3d4o_A 215 DVCINTIPA------LVVTANV----LAEMPSHTFVIDLA 244 (293)
T ss_dssp SEEEECCSS------CCBCHHH----HHHSCTTCEEEECS
T ss_pred CEEEECCCh------HHhCHHH----HHhcCCCCEEEEec
Confidence 999977643 2333333 34689988776433
No 457
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=86.16 E-value=5.4 Score=33.95 Aligned_cols=79 Identities=13% Similarity=0.162 Sum_probs=47.6
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcCh--H------HHHHh
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG--V------AFLKA 195 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~--~------~~l~~ 195 (319)
+.+.||+.|++ |+++++++++ ....+|.+++.++.-++...+.+... ..+++.++..|. . ++++.
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA----GQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc----CCCCceEEEeccccCCHHHHHHHHHH
Confidence 45678888875 4555555442 11358999999988777666555432 234667777665 1 12211
Q ss_pred C--CCCCccEEEEcCC
Q 020933 196 V--PEGTYDAVIVDSS 209 (319)
Q Consensus 196 ~--~~~~fDvIi~D~~ 209 (319)
. .-+..|++|.+..
T Consensus 88 ~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 88 VEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHhCCCCCEEEECCc
Confidence 1 0247899998764
No 458
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=86.04 E-value=4 Score=38.30 Aligned_cols=103 Identities=16% Similarity=0.137 Sum_probs=56.9
Q ss_pred eeeEeeccccHHH--HHHHhcCCCceEEEEECChHHHHHHHhccccccC-CC------CCCCeEEEEcChHHHHHhCCCC
Q 020933 129 KVLVIGGGDGGVL--REVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAV-GF------EDPRVTLHIGDGVAFLKAVPEG 199 (319)
Q Consensus 129 ~VL~IG~G~G~~~--~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~-~~------~~~~v~v~~~D~~~~l~~~~~~ 199 (319)
+|.+||+|.=+.. ..+++ + .+|+++|++++.++..++....... +. ...++++ ..|..+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~--G-~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~-t~~~~~~~~----- 72 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL--Q-NEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKA-TLDSKAAYK----- 72 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT--T-SEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHHH-----
T ss_pred EEEEECCCHHHHHHHHHHhC--C-CEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEE-eCCHHHHhc-----
Confidence 6889999864433 33443 2 6899999999988766543211000 00 0012222 234333332
Q ss_pred CccEEEEcCCCCCC--C-cccc-chHHHHHHHHHhcCCCcEEEEec
Q 020933 200 TYDAVIVDSSDPIG--P-AQEL-FEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 200 ~fDvIi~D~~~~~~--~-~~~l-~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
..|+||+-...+.. . ...+ ...+.++.+.. |++|.+++..+
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~S 117 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKS 117 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECS
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeC
Confidence 36999987665421 0 0011 24567788888 89888777633
No 459
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=86.03 E-value=0.78 Score=43.25 Aligned_cols=49 Identities=16% Similarity=0.375 Sum_probs=37.9
Q ss_pred CCCCceeeEeeccccHHHHHHHhc-------CCCceEEEEECChHHHHHHHhcccc
Q 020933 124 IPNPKKVLVIGGGDGGVLREVSRH-------SSVEKIDICEIDKMVVDVSKQFFPD 172 (319)
Q Consensus 124 ~~~~~~VL~IG~G~G~~~~~l~~~-------~~~~~v~~VEid~~vi~~ak~~~~~ 172 (319)
.+.+-.|+|+|.|.|.++.-+++. ....++..||+|+...+.-++.+..
T Consensus 78 ~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 78 EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 445568999999999998877653 1234899999999999877776643
No 460
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=86.03 E-value=4.2 Score=37.65 Aligned_cols=92 Identities=11% Similarity=0.146 Sum_probs=60.0
Q ss_pred CceeeEeeccccH--HHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEE
Q 020933 127 PKKVLVIGGGDGG--VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAV 204 (319)
Q Consensus 127 ~~~VL~IG~G~G~--~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvI 204 (319)
..+|.+||+|.-+ ++..+++.. .+|+++|.+++.++.+.+. .+. ...|..+.+... ...|+|
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G--~~V~v~dr~~~~~~~l~~~-----------g~~-~~~s~~e~~~~a--~~~DvV 85 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG--HECVVYDLNVNAVQALERE-----------GIA-GARSIEEFCAKL--VKPRVV 85 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTT-----------TCB-CCSSHHHHHHHS--CSSCEE
T ss_pred CCEEEEECchHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHC-----------CCE-EeCCHHHHHhcC--CCCCEE
Confidence 3589999998644 334455553 5799999999887766542 111 123555666543 457999
Q ss_pred EEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEec
Q 020933 205 IVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 205 i~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
|+-.+.. ...+.++.+...|++|-+++-.+
T Consensus 86 i~~vp~~-------~v~~vl~~l~~~l~~g~iiId~s 115 (358)
T 4e21_A 86 WLMVPAA-------VVDSMLQRMTPLLAANDIVIDGG 115 (358)
T ss_dssp EECSCGG-------GHHHHHHHHGGGCCTTCEEEECS
T ss_pred EEeCCHH-------HHHHHHHHHHhhCCCCCEEEeCC
Confidence 9766543 14567888888999877766433
No 461
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=85.88 E-value=3.6 Score=37.27 Aligned_cols=95 Identities=18% Similarity=0.097 Sum_probs=59.0
Q ss_pred CceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH--HHHhCCCCCcc
Q 020933 127 PKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA--FLKAVPEGTYD 202 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~--~l~~~~~~~fD 202 (319)
.++|+++|+| .++..+++.. ... |+++|.|++.++ +++ ..+.++.+|+.+ .+++..-+..|
T Consensus 115 ~~~viI~G~G--~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-----------~~~~~i~gd~~~~~~L~~a~i~~a~ 179 (336)
T 1lnq_A 115 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKK-VLR-----------SGANFVHGDPTRVSDLEKANVRGAR 179 (336)
T ss_dssp -CEEEEESCC--HHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-----------TTCEEEESCTTSHHHHHHTCSTTEE
T ss_pred cCCEEEECCc--HHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-----------CCcEEEEeCCCCHHHHHhcChhhcc
Confidence 4579999974 5666665531 124 999999999887 553 257889999864 45544346789
Q ss_pred EEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEecCC
Q 020933 203 AVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAES 243 (319)
Q Consensus 203 vIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~~ 243 (319)
.|++-..+.. ..-..-...+.+.|+..++....+
T Consensus 180 ~vi~~~~~d~-------~n~~~~~~ar~~~~~~~iiar~~~ 213 (336)
T 1lnq_A 180 AVIVDLESDS-------ETIHCILGIRKIDESVRIIAEAER 213 (336)
T ss_dssp EEEECCSSHH-------HHHHHHHHHHTTCTTSEEEEECSS
T ss_pred EEEEcCCccH-------HHHHHHHHHHHHCCCCeEEEEECC
Confidence 9987543310 112233445667777666665533
No 462
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=85.63 E-value=10 Score=34.61 Aligned_cols=105 Identities=15% Similarity=0.134 Sum_probs=55.7
Q ss_pred CCceeeEeeccccHH--HHHHHhcCCCceEEEEECChHHHHH----HHhccccccCCCCCCCeEEEEcChHHHHHhCCCC
Q 020933 126 NPKKVLVIGGGDGGV--LREVSRHSSVEKIDICEIDKMVVDV----SKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEG 199 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~--~~~l~~~~~~~~v~~VEid~~vi~~----ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~ 199 (319)
++.+|.+||+|.=+. +..++...-..+++.+|++++.++- .+.-++.. ..++++..+|... + .
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~-----~~~v~i~~~~~~a-~-----~ 72 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFA-----PQPVKTSYGTYED-C-----K 72 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGS-----SSCCEEEEECGGG-G-----T
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccc-----cCCeEEEeCcHHH-h-----C
Confidence 456899999865222 2233444333589999999876553 12223321 1346666666322 1 3
Q ss_pred CccEEEEcCCCCCCCcc---ccc--hHHHHHHHHHh---cCCCcEEEEec
Q 020933 200 TYDAVIVDSSDPIGPAQ---ELF--EKPFFESVAKA---LRPGGVVSTQA 241 (319)
Q Consensus 200 ~fDvIi~D~~~~~~~~~---~l~--~~~f~~~~~~~---LkpgG~lv~~~ 241 (319)
..|+||+-...|..+.. .|+ +...++.+.+. ..|++++++-+
T Consensus 73 ~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 73 DADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 46999975544333211 122 11233333322 36899877654
No 463
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=85.61 E-value=2.2 Score=39.05 Aligned_cols=96 Identities=13% Similarity=0.135 Sum_probs=54.5
Q ss_pred CCCCceeeEeec--cccHHHHHHHhcCCCceEEEEECChH---HHHHHHhccccccCCCCCCCeEEEEcCh--HHHHHhC
Q 020933 124 IPNPKKVLVIGG--GDGGVLREVSRHSSVEKIDICEIDKM---VVDVSKQFFPDVAVGFEDPRVTLHIGDG--VAFLKAV 196 (319)
Q Consensus 124 ~~~~~~VL~IG~--G~G~~~~~l~~~~~~~~v~~VEid~~---vi~~ak~~~~~~~~~~~~~~v~v~~~D~--~~~l~~~ 196 (319)
...+.+||++|+ |.|..+.++++..+...|..++.++. -.+.+++. .. + .++..+- .+.+.+.
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l-Ga------~---~vi~~~~~~~~~~~~~ 234 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSL-GA------E---HVITEEELRRPEMKNF 234 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHT-TC------S---EEEEHHHHHSGGGGGT
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhc-CC------c---EEEecCcchHHHHHHH
Confidence 345689999996 55777888888765555666766543 45566543 11 1 1222110 0112121
Q ss_pred CC--CCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 197 PE--GTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 197 ~~--~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
.. ..+|+||- ... ... .....++|+++|.++.-
T Consensus 235 ~~~~~~~Dvvid-~~g---------~~~-~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 235 FKDMPQPRLALN-CVG---------GKS-STELLRQLARGGTMVTY 269 (357)
T ss_dssp TSSSCCCSEEEE-SSC---------HHH-HHHHHTTSCTTCEEEEC
T ss_pred HhCCCCceEEEE-CCC---------cHH-HHHHHHhhCCCCEEEEE
Confidence 12 24999883 221 112 34578999999999875
No 464
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=85.56 E-value=4.5 Score=30.89 Aligned_cols=69 Identities=19% Similarity=0.283 Sum_probs=46.6
Q ss_pred ceEEEEECChHHHHHHHhccccccCCCCCCCe-EEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHH
Q 020933 151 EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRV-TLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAK 229 (319)
Q Consensus 151 ~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v-~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~ 229 (319)
.+|..||-|+...+..++.+... .... -....++.+.+.......+|+||+|..-+... ..++++.+++
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~-----~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~-----g~~~~~~lr~ 75 (144)
T 3kht_A 6 KRVLVVEDNPDDIALIRRVLDRK-----DIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIAN-----GFEVMSAVRK 75 (144)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHT-----TCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGC-----HHHHHHHHHS
T ss_pred CEEEEEeCCHHHHHHHHHHHHhc-----CCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCC-----HHHHHHHHHh
Confidence 57899999999999888887654 1232 33456666666544456799999997654322 3466777765
No 465
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=85.53 E-value=9.5 Score=33.01 Aligned_cols=75 Identities=15% Similarity=0.093 Sum_probs=48.9
Q ss_pred CCceeeEeeccccHHHHH----HHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHh
Q 020933 126 NPKKVLVIGGGDGGVLRE----VSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKA 195 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~----l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~ 195 (319)
..+.||+.|++.| +++. +++. ..+|++++.+++-++...+.+... ..++.++..|..+. ++.
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDT-----GRRALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHH
Confidence 4578888887655 4444 4444 368999999988777665555432 35788898887542 111
Q ss_pred C--CCCCccEEEEcC
Q 020933 196 V--PEGTYDAVIVDS 208 (319)
Q Consensus 196 ~--~~~~fDvIi~D~ 208 (319)
. .-++.|++|.+.
T Consensus 82 ~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 82 TMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHTSCCSEEEECC
T ss_pred HHHHcCCCcEEEECC
Confidence 1 125789999876
No 466
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.49 E-value=2.7 Score=40.34 Aligned_cols=71 Identities=15% Similarity=0.298 Sum_probs=0.0
Q ss_pred CCCceeeEeeccc-cHHHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcCh--HHHHHhCCCCCc
Q 020933 125 PNPKKVLVIGGGD-GGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDG--VAFLKAVPEGTY 201 (319)
Q Consensus 125 ~~~~~VL~IG~G~-G~~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~--~~~l~~~~~~~f 201 (319)
...++|+++|+|. |..+...+... .+|..+|.|++-.+...+.++ +..+++||+ .+.+.+..-+..
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~~--~~v~iIE~d~~r~~~la~~l~---------~~~Vi~GD~td~~~L~ee~i~~~ 301 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQT--YSVKLIERNLQRAEKLSEELE---------NTIVFCGDAADQELLTEENIDQV 301 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCHHHHHHHHHHCT---------TSEEEESCTTCHHHHHHTTGGGC
T ss_pred ccccEEEEEcchHHHHHHHHHhhhc--CceEEEecCHHHHHHHHHHCC---------CceEEeccccchhhHhhcCchhh
Q ss_pred cEEEE
Q 020933 202 DAVIV 206 (319)
Q Consensus 202 DvIi~ 206 (319)
|+++.
T Consensus 302 D~~ia 306 (461)
T 4g65_A 302 DVFIA 306 (461)
T ss_dssp SEEEE
T ss_pred cEEEE
No 467
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=85.31 E-value=11 Score=32.88 Aligned_cols=72 Identities=18% Similarity=0.281 Sum_probs=45.2
Q ss_pred ceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC--C
Q 020933 128 KKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV--P 197 (319)
Q Consensus 128 ~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~--~ 197 (319)
|+||+-|++.| +++.+++. ....+|..+|++++..+...+. .+++..+..|..+. ++.. .
T Consensus 3 K~vlVTGas~G-IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 72 (247)
T 3ged_A 3 RGVIVTGGGHG-IGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---------RPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---------CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEecCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---------cCCEEEEEecCCCHHHHHHHHHHHHHH
Confidence 57887777655 55554442 1236899999998876654432 24677888887432 1111 1
Q ss_pred CCCccEEEEcCC
Q 020933 198 EGTYDAVIVDSS 209 (319)
Q Consensus 198 ~~~fDvIi~D~~ 209 (319)
-++.|++|.+.-
T Consensus 73 ~g~iDiLVNNAG 84 (247)
T 3ged_A 73 LQRIDVLVNNAC 84 (247)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 267999998663
No 468
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.25 E-value=12 Score=32.28 Aligned_cols=78 Identities=13% Similarity=0.143 Sum_probs=49.9
Q ss_pred CCceeeEeeccc--c--H-HHHHHHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HH
Q 020933 126 NPKKVLVIGGGD--G--G-VLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LK 194 (319)
Q Consensus 126 ~~~~VL~IG~G~--G--~-~~~~l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~ 194 (319)
+.|.+|+-|+++ | . +++.+++.. .+|+.++.+++..+.+.+.+... ...++.++..|..+. ++
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~G--a~Vvi~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLG--AKLVFTYRKERSRKELEKLLEQL----NQPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHHHGGG----TCSSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhc----CCCcEEEEEccCCCHHHHHHHHH
Confidence 568899999643 2 2 344455553 68999999988777666655443 345788888887432 11
Q ss_pred hC--CCCCccEEEEcCC
Q 020933 195 AV--PEGTYDAVIVDSS 209 (319)
Q Consensus 195 ~~--~~~~fDvIi~D~~ 209 (319)
.. .-++.|+++.+.-
T Consensus 79 ~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHCCCSEEEECCC
T ss_pred HHHHHhCCCCEEEeccc
Confidence 11 1267999997653
No 469
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=85.24 E-value=0.66 Score=42.02 Aligned_cols=33 Identities=27% Similarity=0.463 Sum_probs=24.1
Q ss_pred CceeeEeeccc-cHH-HHHHHhcCCCceEEEEECCh
Q 020933 127 PKKVLVIGGGD-GGV-LREVSRHSSVEKIDICEIDK 160 (319)
Q Consensus 127 ~~~VL~IG~G~-G~~-~~~l~~~~~~~~v~~VEid~ 160 (319)
..+||+||+|. |.. +..|++. ++.+++.+|-|.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 46999999984 443 3445554 678999999886
No 470
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=85.11 E-value=5.8 Score=34.35 Aligned_cols=78 Identities=14% Similarity=0.165 Sum_probs=49.3
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..+.||+.|++ |++++.+++. ....+|++++.+++-++...+.+... ..++.++..|..+. +...
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA-----GGEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHH
Confidence 45678888865 4565555442 12367999999988777666555432 35788888887432 1110
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
..++.|++|.++.
T Consensus 102 ~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 102 AAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 0247899998664
No 471
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=85.03 E-value=4.4 Score=30.73 Aligned_cols=80 Identities=8% Similarity=0.017 Sum_probs=52.1
Q ss_pred ceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHh
Q 020933 151 EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKA 230 (319)
Q Consensus 151 ~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~ 230 (319)
.+|..||-++...+..++.+... + -.+. ...++.+.+.......+|+||+|..-+... ....++++.+++.
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~--g---~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~---~~g~~~~~~l~~~ 77 (136)
T 3kto_A 7 PIIYLVDHQKDARAALSKLLSPL--D---VTIQ-CFASAESFMRQQISDDAIGMIIEAHLEDKK---DSGIELLETLVKR 77 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTS--S---SEEE-EESSHHHHTTSCCCTTEEEEEEETTGGGBT---THHHHHHHHHHHT
T ss_pred CeEEEEcCCHHHHHHHHHHHHHC--C---cEEE-EeCCHHHHHHHHhccCCCEEEEeCcCCCCC---ccHHHHHHHHHhC
Confidence 47999999999999888887643 1 1333 556777776655457899999997654310 1134667777765
Q ss_pred cCCCc-EEEEe
Q 020933 231 LRPGG-VVSTQ 240 (319)
Q Consensus 231 LkpgG-~lv~~ 240 (319)
- ++- ++++.
T Consensus 78 ~-~~~~ii~~s 87 (136)
T 3kto_A 78 G-FHLPTIVMA 87 (136)
T ss_dssp T-CCCCEEEEE
T ss_pred C-CCCCEEEEE
Confidence 3 443 44443
No 472
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=85.03 E-value=8.6 Score=34.03 Aligned_cols=76 Identities=13% Similarity=0.095 Sum_probs=45.5
Q ss_pred CCceeeEeeccc-cHHHHH----HHhcCCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HH
Q 020933 126 NPKKVLVIGGGD-GGVLRE----VSRHSSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LK 194 (319)
Q Consensus 126 ~~~~VL~IG~G~-G~~~~~----l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~ 194 (319)
..+.||+.|+++ .++++. +++. ..+|++++.++...+..++..... .++.++..|..+. ++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~ 100 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESL------GVKLTVPCDVSDAESVDNMFK 100 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHH------TCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhc------CCeEEEEcCCCCHHHHHHHHH
Confidence 457899999864 244444 4444 367999999976555444433322 2457788886432 11
Q ss_pred hC--CCCCccEEEEcCC
Q 020933 195 AV--PEGTYDAVIVDSS 209 (319)
Q Consensus 195 ~~--~~~~fDvIi~D~~ 209 (319)
.. .-+..|++|.+.-
T Consensus 101 ~~~~~~g~iD~lVnnAG 117 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAVA 117 (296)
T ss_dssp HHHHHHSCCSEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 11 0257899998664
No 473
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=85.02 E-value=4.7 Score=35.44 Aligned_cols=78 Identities=14% Similarity=0.182 Sum_probs=48.1
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..++||+.|++. ++++.+++.. ...+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 31 ~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 31 SGKRALITGAST-GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV-----GGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT-----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 457888888764 4555544321 1368999999987766555544432 24788888887532 2111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-++.|++|.+.-
T Consensus 105 ~~~g~iD~lvnnAg 118 (276)
T 3r1i_A 105 GELGGIDIAVCNAG 118 (276)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0247899998664
No 474
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=84.97 E-value=7.9 Score=33.55 Aligned_cols=80 Identities=14% Similarity=0.204 Sum_probs=48.5
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..+.||+.|++.| +++.+++.. ...+|++++.+++-++...+.+... ....++.++..|..+. ++..
T Consensus 7 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQR---FPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---STTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---cCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 4567888887654 555544321 1368999999988776655544321 1234688888887542 1111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-++.|++|.+.-
T Consensus 83 ~~~g~id~lvnnAg 96 (265)
T 3lf2_A 83 RTLGCASILVNNAG 96 (265)
T ss_dssp HHHCSCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0257899998664
No 475
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=84.89 E-value=4.6 Score=35.18 Aligned_cols=79 Identities=14% Similarity=0.190 Sum_probs=48.3
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..++||+.|++. ++++.+++.. ...+|++++.+++-++...+.+... ...++.++..|..+. ++..
T Consensus 19 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 19 DGKRALITGATK-GIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ----FGTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp TTCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----HCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 456788887764 4555544421 1368999999988777655544321 124788888887432 1111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-+..|++|.+.-
T Consensus 94 ~~~g~id~lv~nAg 107 (266)
T 4egf_A 94 EAFGGLDVLVNNAG 107 (266)
T ss_dssp HHHTSCSEEEEECC
T ss_pred HHcCCCCEEEECCC
Confidence 0247899998654
No 476
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=84.57 E-value=11 Score=32.44 Aligned_cols=75 Identities=17% Similarity=0.203 Sum_probs=46.4
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..++||+.|++ |++++++++. ....+|++++.+++-.+...+.+. .++.++..|..+. ++..
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG--------PAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--------TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--------CCceEEEeeCCCHHHHHHHHHHHH
Confidence 45788888865 4455554432 113689999999887665544331 3678888887432 1111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-+..|++|.+.-
T Consensus 78 ~~~g~id~lv~~Ag 91 (259)
T 4e6p_A 78 EHAGGLDILVNNAA 91 (259)
T ss_dssp HHSSSCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1247999998664
No 477
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=84.52 E-value=10 Score=32.89 Aligned_cols=78 Identities=18% Similarity=0.215 Sum_probs=48.0
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..++||+.|++ |++++.+++.. ...+|++++.++.-++...+.+... ..++.++..|..+. ++..
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL-----GAKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc-----CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence 45678888765 55666655421 1367999999987666554444322 24788898887532 1110
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-+..|+||....
T Consensus 104 ~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 104 AEIGDVSILVNNAG 117 (272)
T ss_dssp HHTCCCSEEEECCC
T ss_pred HHCCCCcEEEECCC
Confidence 0247899998664
No 478
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=84.49 E-value=5.9 Score=34.71 Aligned_cols=79 Identities=16% Similarity=0.084 Sum_probs=47.2
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
+.+.||+.|++. ++++.+++. ....+|++++.+++-.+...+.+... ...++.++..|..+. ++..
T Consensus 26 ~~k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~~~~~~ 100 (277)
T 4fc7_A 26 RDKVAFITGGGS-GIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA----TGRRCLPLSMDVRAPPAVMAAVDQAL 100 (277)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----HSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 356788888764 455555442 12368999999977655444433221 124788898887532 1111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-+..|++|.+.-
T Consensus 101 ~~~g~id~lv~nAg 114 (277)
T 4fc7_A 101 KEFGRIDILINCAA 114 (277)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCc
Confidence 0247899998764
No 479
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=84.48 E-value=8.7 Score=33.57 Aligned_cols=81 Identities=19% Similarity=0.195 Sum_probs=49.2
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..++||+.|++. ++++.+++. ....+|++++.+++-++...+.+... +....++.++..|..+. ++..
T Consensus 10 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 10 QDRTYLVTGGGS-GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEAL--GANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--CCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 456888888754 455554432 11368999999988776655554432 11223788999987542 1111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
..++.|++|.+.-
T Consensus 87 ~~~g~id~lv~nAg 100 (281)
T 3svt_A 87 AWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0247899998664
No 480
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.44 E-value=8.7 Score=34.49 Aligned_cols=80 Identities=20% Similarity=0.205 Sum_probs=49.4
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..+.||+.|+++| ++.++++.. ...+|++++.++.-++...+.+... + .+.++.++..|..+. ++..
T Consensus 7 ~~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~--~-~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE--G-SGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--T-CGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--C-CCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4568888887654 555544321 1368999999988777665554332 1 123788999887542 1111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
..+..|++|.+..
T Consensus 83 ~~~g~id~lv~nAg 96 (319)
T 3ioy_A 83 ARFGPVSILCNNAG 96 (319)
T ss_dssp HHTCCEEEEEECCC
T ss_pred HhCCCCCEEEECCC
Confidence 1257899998765
No 481
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=84.43 E-value=12 Score=32.53 Aligned_cols=110 Identities=16% Similarity=0.135 Sum_probs=59.3
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECC-hHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEID-KMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid-~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~ 196 (319)
..+.||+.|++. ++++.++++. ...+|++++.+ +...+...+.+... ..++.++..|..+. ++..
T Consensus 17 ~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 17 DGKVALVTGSGR-GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL-----GSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCEEEESCTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 456788888764 4555544421 13578887764 44444444333322 35788899887542 1111
Q ss_pred --CCCCccEEEEcCCCCC-CCccccch--------------HHHHHHHHHhcCCCcEEEEec
Q 020933 197 --PEGTYDAVIVDSSDPI-GPAQELFE--------------KPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 197 --~~~~fDvIi~D~~~~~-~~~~~l~~--------------~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.-+..|++|.+.-... .+...... ....+.+...|+++|.++..+
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 0247899997654321 11111111 123466677888888877654
No 482
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=84.27 E-value=2.1 Score=38.22 Aligned_cols=63 Identities=19% Similarity=0.324 Sum_probs=41.1
Q ss_pred CCccEEEEcCCCCCCCcc------c-cchHHHHHHHHHhcCCCcEEEEecCCcccChHHHHHHHHHHHhhcC
Q 020933 199 GTYDAVIVDSSDPIGPAQ------E-LFEKPFFESVAKALRPGGVVSTQAESIWLHMHIIEDIVANCRQIFK 263 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~~------~-l~~~~f~~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~ 263 (319)
++||+|+++...|..... + .-..-.-....++|+|||.+++-+.. +.....+.++..+.+.|.
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYG--yADR~SE~vV~alARkF~ 279 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYG--YADRTSERVICVLGRKFR 279 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECC--CCSHHHHHHHHHHHTTEE
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeec--ccccchHHHHHHHHhhhe
Confidence 799999999877653210 0 00011223346899999999987633 234566788888888884
No 483
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=84.23 E-value=7.6 Score=33.54 Aligned_cols=107 Identities=20% Similarity=0.234 Sum_probs=60.9
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHH------HhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFL------KAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l------~~~- 196 (319)
..++||+.|++. ++++.+++. ....+|++++.+++-++...+.+. .++.++..|..+.- +..
T Consensus 7 ~gk~~lVTGas~-gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAIVIGGTH-GMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--------PRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------GGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--------CcceEEEccCCCHHHHHHHHHHHH
Confidence 457888888764 455554442 113689999999887766555432 36788888875421 110
Q ss_pred -CCCCccEEEEcCCCCCC-Cccccch--------------HHHHHHHHHhcCCCcEEEEec
Q 020933 197 -PEGTYDAVIVDSSDPIG-PAQELFE--------------KPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 197 -~~~~fDvIi~D~~~~~~-~~~~l~~--------------~~f~~~~~~~LkpgG~lv~~~ 241 (319)
.-+..|++|.+.-.... +...... ....+.+...++++|.++..+
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 12578999986543221 1111111 123455566677788776543
No 484
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=84.22 E-value=6.5 Score=34.37 Aligned_cols=77 Identities=16% Similarity=0.188 Sum_probs=47.7
Q ss_pred CceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC--
Q 020933 127 PKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV-- 196 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~-- 196 (319)
.+.||+.|++. ++++.+++. ....+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 4 ~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 77 (264)
T 3tfo_A 4 DKVILITGASG-GIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA-----GGTALAQVLDVTDRHSVAAFAQAAVD 77 (264)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT-----TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCcc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46788888764 455554442 12368999999988777665555432 34678888887432 1111
Q ss_pred CCCCccEEEEcCC
Q 020933 197 PEGTYDAVIVDSS 209 (319)
Q Consensus 197 ~~~~fDvIi~D~~ 209 (319)
.-+..|++|.+.-
T Consensus 78 ~~g~iD~lVnnAG 90 (264)
T 3tfo_A 78 TWGRIDVLVNNAG 90 (264)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 0247899998654
No 485
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=84.16 E-value=10 Score=32.90 Aligned_cols=78 Identities=14% Similarity=0.127 Sum_probs=47.8
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHH------HHHhCC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA------FLKAVP 197 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~------~l~~~~ 197 (319)
..++||+.|++ |++++.+++.. ...+|++++.+++-++...+.+... ..+.++.++..|..+ .++.
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~~D~~~~~~~~~~~~~-- 82 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQ---YPDAILQPVVADLGTEQGCQDVIEK-- 82 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---CTTCEEEEEECCTTSHHHHHHHHHH--
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---CCCceEEEEecCCCCHHHHHHHHHh--
Confidence 45788888876 44555544421 1368999999987766554443322 123467788888643 2332
Q ss_pred CCCccEEEEcCC
Q 020933 198 EGTYDAVIVDSS 209 (319)
Q Consensus 198 ~~~fDvIi~D~~ 209 (319)
-++.|++|.+.-
T Consensus 83 ~g~id~lv~nAg 94 (267)
T 3t4x_A 83 YPKVDILINNLG 94 (267)
T ss_dssp CCCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899998654
No 486
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=84.15 E-value=14 Score=31.99 Aligned_cols=78 Identities=14% Similarity=0.259 Sum_probs=47.1
Q ss_pred CCceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..+.||+.|++ |++++.+++.. ...+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 20 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 20 KGTTALVTGGS-KGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK-----GLNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCc-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 35678888865 55655554421 1368999999987665544433321 24688888887432 1110
Q ss_pred -C-CCCccEEEEcCC
Q 020933 197 -P-EGTYDAVIVDSS 209 (319)
Q Consensus 197 -~-~~~fDvIi~D~~ 209 (319)
. .+..|++|.+.-
T Consensus 94 ~~~~g~id~lv~nAg 108 (273)
T 1ae1_A 94 HVFDGKLNILVNNAG 108 (273)
T ss_dssp HHTTSCCCEEEECCC
T ss_pred HHcCCCCcEEEECCC
Confidence 0 167899998664
No 487
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=84.10 E-value=4.6 Score=38.53 Aligned_cols=104 Identities=15% Similarity=0.205 Sum_probs=59.4
Q ss_pred ceeeEeeccccHHHHH--HHhcCCCceEEEEECChHHHHHHHhcccccc-CCC------CCCCeEEEEcChHHHHHhCCC
Q 020933 128 KKVLVIGGGDGGVLRE--VSRHSSVEKIDICEIDKMVVDVSKQFFPDVA-VGF------EDPRVTLHIGDGVAFLKAVPE 198 (319)
Q Consensus 128 ~~VL~IG~G~G~~~~~--l~~~~~~~~v~~VEid~~vi~~ak~~~~~~~-~~~------~~~~v~v~~~D~~~~l~~~~~ 198 (319)
.+|.+||+|.-+.... +++ ..+|+++|++++.++..++...... .++ ...++++ ..|..+.+
T Consensus 37 mkIaVIGlG~mG~~lA~~La~---G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~-ttd~~ea~----- 107 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ---NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA-TTDKHDAY----- 107 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE-ESCHHHHH-----
T ss_pred CEEEEECcCHHHHHHHHHHHc---CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEE-EcCHHHHH-----
Confidence 4899999986554433 333 3689999999999887766321100 000 0113332 34544443
Q ss_pred CCccEEEEcCCCCCCCc---ccc-chHHHHHHHHHhcCCCcEEEEec
Q 020933 199 GTYDAVIVDSSDPIGPA---QEL-FEKPFFESVAKALRPGGVVSTQA 241 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~---~~l-~~~~f~~~~~~~LkpgG~lv~~~ 241 (319)
...|+||+-.+.+.... ..+ +-.+..+.+.. |+||-+++..+
T Consensus 108 ~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~S 153 (432)
T 3pid_A 108 RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKS 153 (432)
T ss_dssp TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECS
T ss_pred hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeC
Confidence 24599997665542110 111 23456677888 99988877644
No 488
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=84.08 E-value=3.4 Score=32.76 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=50.6
Q ss_pred cccHHHHHHHhc-CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCC
Q 020933 136 GDGGVLREVSRH-SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGP 214 (319)
Q Consensus 136 G~G~~~~~l~~~-~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~ 214 (319)
|.++......+. ....+|..||-|+...+..++.+... ....+-....++.+.+.......+|+||+|..-+...
T Consensus 10 ~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~----~~~~~v~~~~~~~~al~~l~~~~~dlvilD~~l~~~~ 85 (164)
T 3t8y_A 10 HSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQ----PDMKVVGFAKDGLEAVEKAIELKPDVITMDIEMPNLN 85 (164)
T ss_dssp --------------CCEEEEEECSCHHHHHHHHHHHHTS----TTEEEEEEESSHHHHHHHHHHHCCSEEEECSSCSSSC
T ss_pred ccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcC----CCeEEEEecCCHHHHHHHhccCCCCEEEEeCCCCCCC
Confidence 444444444442 22357999999999999888877643 1111222456776665433235699999998765432
Q ss_pred ccccchHHHHHHHHHhcCCCcEEEEe
Q 020933 215 AQELFEKPFFESVAKALRPGGVVSTQ 240 (319)
Q Consensus 215 ~~~l~~~~f~~~~~~~LkpgG~lv~~ 240 (319)
..++++.+++.- +--++++.
T Consensus 86 -----g~~l~~~lr~~~-~~~ii~~s 105 (164)
T 3t8y_A 86 -----GIEALKLIMKKA-PTRVIMVS 105 (164)
T ss_dssp -----HHHHHHHHHHHS-CCEEEEEE
T ss_pred -----HHHHHHHHHhcC-CceEEEEe
Confidence 346677776543 33444443
No 489
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=84.08 E-value=4.6 Score=30.69 Aligned_cols=79 Identities=9% Similarity=0.104 Sum_probs=52.7
Q ss_pred ceEEEEECChHHHHHHHhcccc-ccCCCCCCCeEEEEcChHHHHHhCCC-CCccEEEEcCCCC-CCCccccchHHHHHHH
Q 020933 151 EKIDICEIDKMVVDVSKQFFPD-VAVGFEDPRVTLHIGDGVAFLKAVPE-GTYDAVIVDSSDP-IGPAQELFEKPFFESV 227 (319)
Q Consensus 151 ~~v~~VEid~~vi~~ak~~~~~-~~~~~~~~~v~v~~~D~~~~l~~~~~-~~fDvIi~D~~~~-~~~~~~l~~~~f~~~~ 227 (319)
.+|..||-|+...+..++.+.. . +-++. ...++.+.+..... ..+|+||+|..-+ ... ..++++.+
T Consensus 5 ~~ilivdd~~~~~~~l~~~L~~~~-----~~~v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~-----g~~~~~~l 73 (140)
T 3lua_A 5 GTVLLIDYFEYEREKTKIIFDNIG-----EYDFI-EVENLKKFYSIFKDLDSITLIIMDIAFPVEKE-----GLEVLSAI 73 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHC-----CCEEE-EECSHHHHHTTTTTCCCCSEEEECSCSSSHHH-----HHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcc-----CccEE-EECCHHHHHHHHhcCCCCcEEEEeCCCCCCCc-----HHHHHHHH
Confidence 5799999999999988888765 3 12333 56677777765545 7899999997654 211 34677777
Q ss_pred HH--hcCCCcEEEEe
Q 020933 228 AK--ALRPGGVVSTQ 240 (319)
Q Consensus 228 ~~--~LkpgG~lv~~ 240 (319)
++ ....--++++.
T Consensus 74 ~~~~~~~~~~ii~ls 88 (140)
T 3lua_A 74 RNNSRTANTPVIIAT 88 (140)
T ss_dssp HHSGGGTTCCEEEEE
T ss_pred HhCcccCCCCEEEEe
Confidence 76 33333455543
No 490
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=84.07 E-value=5.9 Score=34.81 Aligned_cols=78 Identities=13% Similarity=0.057 Sum_probs=48.4
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
+.|.+|+-|++. ++++.+++. ....+|..++.+++-++...+.+... ..++..+..|..+. ++..
T Consensus 8 ~gKvalVTGas~-GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 8 TGKTALVTGSAR-GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK-----GYDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-----TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 456777777665 455555442 12368999999998777665555432 24677777776432 2111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
.-++.|++|.+.-
T Consensus 82 ~~~G~iDiLVNNAG 95 (255)
T 4g81_D 82 AEGIHVDILINNAG 95 (255)
T ss_dssp HTTCCCCEEEECCC
T ss_pred HHCCCCcEEEECCC
Confidence 2467999998663
No 491
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=83.90 E-value=6.8 Score=30.23 Aligned_cols=79 Identities=13% Similarity=0.088 Sum_probs=51.1
Q ss_pred ceEEEEECChHHHHHHHhccccccCCCCCCCeEE--EEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHH
Q 020933 151 EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTL--HIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVA 228 (319)
Q Consensus 151 ~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v--~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~ 228 (319)
.+|..||-|+...+..++.+... ...++ ...++.+.+.......+|+||+|...+... ..++++.++
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~------~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~-----g~~~~~~l~ 74 (153)
T 3cz5_A 6 ARIMLVDDHPIVREGYRRLIERR------PGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPG-----GIEATRHIR 74 (153)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTS------TTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSC-----HHHHHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHhhC------CCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCC-----HHHHHHHHH
Confidence 57899999999999888877541 23444 466766655433346799999997654322 346778777
Q ss_pred HhcCCCcEEEEe
Q 020933 229 KALRPGGVVSTQ 240 (319)
Q Consensus 229 ~~LkpgG~lv~~ 240 (319)
+.-..--++++.
T Consensus 75 ~~~~~~~ii~ls 86 (153)
T 3cz5_A 75 QWDGAARILIFT 86 (153)
T ss_dssp HHCTTCCEEEEE
T ss_pred HhCCCCeEEEEE
Confidence 764333344443
No 492
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=83.89 E-value=10 Score=31.88 Aligned_cols=78 Identities=13% Similarity=0.113 Sum_probs=47.5
Q ss_pred CceeeEeeccccHHHHHHHhcC--CCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH--HHhCC-----
Q 020933 127 PKKVLVIGGGDGGVLREVSRHS--SVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF--LKAVP----- 197 (319)
Q Consensus 127 ~~~VL~IG~G~G~~~~~l~~~~--~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~--l~~~~----- 197 (319)
.++||+.|++ |+++++++++. ...+|++++.+++-++...+.+... ...++.++..|..+. ++..-
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE----QGVEVFYHHLDVSKAESVEEFSKKVLE 76 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----HCCCEEEEECCTTCHHHHHHHCC-HHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----cCCeEEEEEeccCCHHHHHHHHHHHHH
Confidence 3578888765 45555554421 1357999999988766555444311 135788999887543 22110
Q ss_pred -CCCccEEEEcCC
Q 020933 198 -EGTYDAVIVDSS 209 (319)
Q Consensus 198 -~~~fDvIi~D~~ 209 (319)
-+..|++|.+.-
T Consensus 77 ~~g~id~li~~Ag 89 (235)
T 3l77_A 77 RFGDVDVVVANAG 89 (235)
T ss_dssp HHSSCSEEEECCC
T ss_pred hcCCCCEEEECCc
Confidence 147899998654
No 493
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=83.88 E-value=5.5 Score=30.22 Aligned_cols=80 Identities=10% Similarity=0.090 Sum_probs=49.5
Q ss_pred ceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCC-----CCccEEEEcCCCCCCCccccchHHHHH
Q 020933 151 EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE-----GTYDAVIVDSSDPIGPAQELFEKPFFE 225 (319)
Q Consensus 151 ~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~-----~~fDvIi~D~~~~~~~~~~l~~~~f~~ 225 (319)
.+|..||-++...+..++.+... .....-....++.+.+..... ..+|+||+|..-+... ..++++
T Consensus 10 ~~iLivdd~~~~~~~l~~~l~~~----~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~-----g~~~~~ 80 (146)
T 3ilh_A 10 DSVLLIDDDDIVNFLNTTIIRMT----HRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGIN-----GWELID 80 (146)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTT----CCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSC-----HHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhc----CCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCC-----HHHHHH
Confidence 57899999999888888877643 110122344566555433222 6799999998765432 346788
Q ss_pred HHHHh---cCCCcEEEE
Q 020933 226 SVAKA---LRPGGVVST 239 (319)
Q Consensus 226 ~~~~~---LkpgG~lv~ 239 (319)
.+++. ..+.-.+++
T Consensus 81 ~l~~~~~~~~~~~~ii~ 97 (146)
T 3ilh_A 81 LFKQHFQPMKNKSIVCL 97 (146)
T ss_dssp HHHHHCGGGTTTCEEEE
T ss_pred HHHHhhhhccCCCeEEE
Confidence 88773 334444444
No 494
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=83.80 E-value=0.88 Score=36.41 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=43.8
Q ss_pred ChHHHHHHHhccccccCCCCCCCeEEEEcChHH-HHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHhcCCCcEE
Q 020933 159 DKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVA-FLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVV 237 (319)
Q Consensus 159 d~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~-~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~LkpgG~l 237 (319)
+|+.++.++..+... .+..+..+.-|-.. -+-..+..+||.|+.-.... + ...++.+..+..+...|||||.|
T Consensus 21 ~pe~le~~k~~~~~~----~~~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~-~-~~~~l~r~li~~l~~aLkpgG~L 94 (136)
T 2km1_A 21 TPELVENTKAQAASK----KVKFVDQFLINKLNDGSITLENAKYETVHYLTPEA-Q-TDIKFPKKLISVLADSLKPNGSL 94 (136)
T ss_dssp SHHHHHHHHHHHHHT----TEEEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCS-S-CSCCCCHHHHHHHHTTCCTTCCE
T ss_pred CHHHHHHHHHhhhcc----ccchhhHHHHHHHhcCcccCCcccccEEEEecCCc-c-chhhcCHHHHHHHHHHhCCCCEE
Confidence 466666666544321 11234444444221 11123578999988633221 1 22456689999999999999999
Q ss_pred EE
Q 020933 238 ST 239 (319)
Q Consensus 238 v~ 239 (319)
..
T Consensus 95 ~g 96 (136)
T 2km1_A 95 IG 96 (136)
T ss_dssp EC
T ss_pred Ee
Confidence 85
No 495
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=83.71 E-value=9.3 Score=33.54 Aligned_cols=80 Identities=14% Similarity=0.132 Sum_probs=46.6
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEEC-ChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEI-DKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEi-d~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~ 196 (319)
..++||+.|++. ++++.+++. ....+|++++. +++.++...+.+... ...++.++..|..+. ++..
T Consensus 24 ~~k~~lVTGas~-GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 24 MTKTAVITGSTS-GIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL----SSGTVLHHPADMTKPSEIADMMAMV 98 (281)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT----CSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc----cCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 346788888764 455554442 11358999998 666555444443321 235788888887432 1111
Q ss_pred --CCCCccEEEEcCCC
Q 020933 197 --PEGTYDAVIVDSSD 210 (319)
Q Consensus 197 --~~~~fDvIi~D~~~ 210 (319)
.-+..|++|.++-.
T Consensus 99 ~~~~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 99 ADRFGGADILVNNAGV 114 (281)
T ss_dssp HHHTSSCSEEEECCCC
T ss_pred HHHCCCCCEEEECCCC
Confidence 12578999986643
No 496
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=83.58 E-value=4.9 Score=35.25 Aligned_cols=78 Identities=18% Similarity=0.145 Sum_probs=48.2
Q ss_pred CCceeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHH------HHhC-
Q 020933 126 NPKKVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAF------LKAV- 196 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~------l~~~- 196 (319)
..+.||+.|++. ++++.+++. ....+|++++.+++-++...+.+... ..++.++..|..+. ++..
T Consensus 25 ~gk~~lVTGas~-gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 25 GGRTALVTGSSR-GLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV-----GHDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT-----TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 457888888654 455554442 11368999999988776665554432 34788888887432 1111
Q ss_pred -CCCCccEEEEcCC
Q 020933 197 -PEGTYDAVIVDSS 209 (319)
Q Consensus 197 -~~~~fDvIi~D~~ 209 (319)
..+..|++|.+.-
T Consensus 99 ~~~g~iD~lv~nAg 112 (271)
T 4ibo_A 99 EQGIDVDILVNNAG 112 (271)
T ss_dssp HHTCCCCEEEECCC
T ss_pred HHCCCCCEEEECCC
Confidence 1257899998664
No 497
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.57 E-value=6.9 Score=32.48 Aligned_cols=99 Identities=16% Similarity=0.166 Sum_probs=55.0
Q ss_pred eeeEeeccccHHHHHHHhc--CCCceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEE
Q 020933 129 KVLVIGGGDGGVLREVSRH--SSVEKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIV 206 (319)
Q Consensus 129 ~VL~IG~G~G~~~~~l~~~--~~~~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~ 206 (319)
+||+.|+ +|.++..+++. ....+|+++..++.-.+.. . .++++++.+|..+.-... -+..|+||.
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~--------~~~~~~~~~D~~d~~~~~-~~~~d~vi~ 68 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---L--------GATVATLVKEPLVLTEAD-LDSVDAVVD 68 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---T--------CTTSEEEECCGGGCCHHH-HTTCSEEEE
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEecccccccc---c--------CCCceEEecccccccHhh-cccCCEEEE
Confidence 5888876 45565555442 1136899999998754422 1 247899999976532111 246899997
Q ss_pred cCCCCCCCccccchHHHHHHHHHhcCCC-cEEEEe
Q 020933 207 DSSDPIGPAQELFEKPFFESVAKALRPG-GVVSTQ 240 (319)
Q Consensus 207 D~~~~~~~~~~l~~~~f~~~~~~~Lkpg-G~lv~~ 240 (319)
.....+.+..........+.+.+.++.. +.+++.
T Consensus 69 ~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 69 ALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred CCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 6644322111111233445555555543 455544
No 498
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=83.55 E-value=5.5 Score=30.85 Aligned_cols=77 Identities=12% Similarity=0.155 Sum_probs=49.8
Q ss_pred ceEEEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCccEEEEcCCCCCCCccccchHHHHHHHHHh
Q 020933 151 EKIDICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKA 230 (319)
Q Consensus 151 ~~v~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~fDvIi~D~~~~~~~~~~l~~~~f~~~~~~~ 230 (319)
.+|..||-|+...+..++.+... + -.+. ...|+.+.+.......+|+||+|..-+... ..++++.+++.
T Consensus 15 ~~ILivdd~~~~~~~l~~~L~~~--g---~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~-----g~~~~~~l~~~ 83 (153)
T 3hv2_A 15 PEILLVDSQEVILQRLQQLLSPL--P---YTLH-FARDATQALQLLASREVDLVISAAHLPQMD-----GPTLLARIHQQ 83 (153)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTS--S---CEEE-EESSHHHHHHHHHHSCCSEEEEESCCSSSC-----HHHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHhccc--C---cEEE-EECCHHHHHHHHHcCCCCEEEEeCCCCcCc-----HHHHHHHHHhH
Confidence 57999999999999888887653 1 1232 455666555433245799999998765432 34677777764
Q ss_pred cCCCcEEEE
Q 020933 231 LRPGGVVST 239 (319)
Q Consensus 231 LkpgG~lv~ 239 (319)
.++-.+++
T Consensus 84 -~~~~~ii~ 91 (153)
T 3hv2_A 84 -YPSTTRIL 91 (153)
T ss_dssp -CTTSEEEE
T ss_pred -CCCCeEEE
Confidence 34444444
No 499
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=83.52 E-value=6 Score=35.95 Aligned_cols=72 Identities=14% Similarity=0.118 Sum_probs=44.3
Q ss_pred CCceeeEeeccc--cH-HHHHHHhcCCCceE-EEEECChHHHHHHHhccccccCCCCCCCeEEEEcChHHHHHhCCCCCc
Q 020933 126 NPKKVLVIGGGD--GG-VLREVSRHSSVEKI-DICEIDKMVVDVSKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPEGTY 201 (319)
Q Consensus 126 ~~~~VL~IG~G~--G~-~~~~l~~~~~~~~v-~~VEid~~vi~~ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~~~f 201 (319)
++-+|.+||||. |. .+..+.+..+..++ -++|.+++..+...+.+.. .-...|..+.+. +...
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~----------~~~~~~~~~ll~---~~~v 83 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGN----------PAVFDSYEELLE---SGLV 83 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSS----------CEEESCHHHHHH---SSCC
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCC----------CcccCCHHHHhc---CCCC
Confidence 456999999993 33 34445554233455 5679998876654443321 123467777775 3568
Q ss_pred cEEEEcCCC
Q 020933 202 DAVIVDSSD 210 (319)
Q Consensus 202 DvIi~D~~~ 210 (319)
|+|++-.+.
T Consensus 84 D~V~i~tp~ 92 (340)
T 1zh8_A 84 DAVDLTLPV 92 (340)
T ss_dssp SEEEECCCG
T ss_pred CEEEEeCCc
Confidence 999976543
No 500
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=83.43 E-value=9.7 Score=34.44 Aligned_cols=103 Identities=20% Similarity=0.276 Sum_probs=55.1
Q ss_pred CCceeeEeeccccHHHHH--HHhcCCCceEEEEECChHHHHH-----HHhccccccCCCCCCCeEEEEcChHHHHHhCCC
Q 020933 126 NPKKVLVIGGGDGGVLRE--VSRHSSVEKIDICEIDKMVVDV-----SKQFFPDVAVGFEDPRVTLHIGDGVAFLKAVPE 198 (319)
Q Consensus 126 ~~~~VL~IG~G~G~~~~~--l~~~~~~~~v~~VEid~~vi~~-----ak~~~~~~~~~~~~~~v~v~~~D~~~~l~~~~~ 198 (319)
++.+|.+||+|.-+.+.. ++......++..+|++++.++- ... .+. ...++++..++ .+-+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~-~~~-----~~~~~~v~~~~-~~a~----- 72 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHA-TPY-----SPTTVRVKAGE-YSDC----- 72 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHH-GGG-----SSSCCEEEECC-GGGG-----
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhh-hhh-----cCCCeEEEeCC-HHHh-----
Confidence 346899999976544333 3333334689999999865442 221 111 11345666544 2222
Q ss_pred CCccEEEEcCCCCCCCccc-----cchHHHHHH----HHHhcCCCcEEEEec
Q 020933 199 GTYDAVIVDSSDPIGPAQE-----LFEKPFFES----VAKALRPGGVVSTQA 241 (319)
Q Consensus 199 ~~fDvIi~D~~~~~~~~~~-----l~~~~f~~~----~~~~LkpgG~lv~~~ 241 (319)
..-|+||+-...+..+... ..+...++. +.+. .|++++++-+
T Consensus 73 ~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (317)
T 3d0o_A 73 HDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT 123 (317)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred CCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 3469999765444332111 111233333 3444 8999988743
Done!