BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020934
MQSASVSAALPSSSCHYCYPVPNRFLHFRNLHLKKNLNSLSLSRNQIHAKNFCSLTLPTA
NSFSKEQEENLRKDNKLHPDQNHTFLDQFYSSADTNKLGNQDPESQNQEQDEEPRYNKDK
YWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALPHVTVPDIRYIDWAELQR
RGFKGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRP
FTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAM
QCVKDPPSLESNFIACNRS

High Scoring Gene Products

Symbol, full name Information P value
AT3G58830 protein from Arabidopsis thaliana 1.8e-74
BA_4563
hydrolase, HAD subfamily IIIA
protein from Bacillus anthracis str. Ames 9.0e-06
CHY_0622
hydrolase, HAD subfamily IIIA
protein from Carboxydothermus hydrogenoformans Z-2901 3.6e-05
GEP4
Mitochondrial phosphatidylglycerophosphatase (PGP phosphatase)
gene from Saccharomyces cerevisiae 4.0e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020934
        (319 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2099104 - symbol:AT3G58830 "AT3G58830" species...   496  1.8e-74   2
TIGR_CMR|BA_4563 - symbol:BA_4563 "hydrolase, HAD subfami...   118  9.0e-06   1
TIGR_CMR|CHY_0622 - symbol:CHY_0622 "hydrolase, HAD subfa...   116  3.6e-05   1
SGD|S000001142 - symbol:GEP4 "Mitochondrial phosphatidylg...   116  4.0e-05   1


>TAIR|locus:2099104 [details] [associations]
            symbol:AT3G58830 "AT3G58830" species:3702 "Arabidopsis
            thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
            [GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002686
            Gene3D:3.40.50.1000 InterPro:IPR023214 SUPFAM:SSF56784
            GO:GO:0016787 eggNOG:COG1011 InterPro:IPR006549 InterPro:IPR010021
            Pfam:PF09419 TIGRFAMs:TIGR01662 TIGRFAMs:TIGR01668 EMBL:BT004819
            EMBL:AK227892 IPI:IPI00546835 RefSeq:NP_191442.2
            ProteinModelPortal:Q84VV0 SMR:Q84VV0 PaxDb:Q84VV0 PRIDE:Q84VV0
            EnsemblPlants:AT3G58830.1 GeneID:825052 KEGG:ath:AT3G58830
            KO:K07015 OMA:SSELIMV ProtClustDB:CLSN2680928 Genevestigator:Q84VV0
            Uniprot:Q84VV0
        Length = 343

 Score = 496 (179.7 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
 Identities = 92/125 (73%), Positives = 108/125 (86%)

Query:   185 GLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSSQLIMVGDRPFTDI 244
             GL EYD+D SKA+ LE +IGI+V+RHRVKKPAGTAEE+EKHFGC SS+LIMVGDRPFTDI
Sbjct:   219 GLTEYDHDDSKAKALEAEIGIRVLRHRVKKPAGTAEEVEKHFGCTSSELIMVGDRPFTDI 278

Query:   245 VYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIVNRWFRRGLKPISHNLLPDAMQCVK 304
             VYGNRNGFLT+LTEPLS AEEPFIVRQVR+LE+ ++ RW R+GLKP+ H+L+ D  Q VK
Sbjct:   279 VYGNRNGFLTVLTEPLSRAEEPFIVRQVRRLELALLKRWLRKGLKPVDHSLVSDITQFVK 338

Query:   305 DPPSL 309
              P  L
Sbjct:   339 VPSDL 343

 Score = 274 (101.5 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
 Identities = 64/149 (42%), Positives = 85/149 (57%)

Query:    50 KNFCSLTLPTANSFSKEQEENLRKDNKLH---PDQNHTFL-DQFYSSADTNKLGNQDPES 105
             K  CS   P+++S S  Q     +  K +   P    +FL  QF S  +     N+ PE 
Sbjct:    34 KPICSPPPPSSSSSSPLQTTTTHRSQKQNLRLPTFEDSFLLYQFSSPTEDPGFSNRIPEQ 93

Query:   106 QNQEQDEE--PRYNKDKYWTVLCTNMWWSQLKAALGQRINVEGIVSSTVVFAKDRHLALP 163
              + E  E   PR   +     + +NMWW+ LKAALGQRIN+EGIVSS  V  KDR   LP
Sbjct:    94 FDGEPRELVLPRVEDNNKGLAISSNMWWADLKAALGQRINIEGIVSSVSVVVKDRQFVLP 153

Query:   164 HVTVPDIRYIDWAELQRRGFKGL-YEYDN 191
             HV+V D+RYIDW  L+R+GFKG+ ++ DN
Sbjct:   154 HVSVKDLRYIDWEVLKRKGFKGVVFDKDN 182


>TIGR_CMR|BA_4563 [details] [associations]
            symbol:BA_4563 "hydrolase, HAD subfamily IIIA"
            species:198094 "Bacillus anthracis str. Ames" [GO:0008152
            "metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=ISS] InterPro:IPR006439 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR Gene3D:3.40.50.1000 InterPro:IPR023214
            SUPFAM:SSF56784 Pfam:PF13419 GO:GO:0008967 TIGRFAMs:TIGR01549
            InterPro:IPR006549 InterPro:IPR010021 TIGRFAMs:TIGR01662
            TIGRFAMs:TIGR01668 KO:K07015 HOGENOM:HOG000016502 OMA:KWNTRIN
            RefSeq:NP_846785.1 RefSeq:YP_021208.2 RefSeq:YP_030482.1
            ProteinModelPortal:Q81LP9 DNASU:1088332
            EnsemblBacteria:EBBACT00000008380 EnsemblBacteria:EBBACT00000013866
            EnsemblBacteria:EBBACT00000019247 GeneID:1088332 GeneID:2818973
            GeneID:2852834 KEGG:ban:BA_4563 KEGG:bar:GBAA_4563 KEGG:bat:BAS4234
            ProtClustDB:CLSK2521149 BioCyc:BANT260799:GJAJ-4290-MONOMER
            BioCyc:BANT261594:GJ7F-4438-MONOMER Uniprot:Q81LP9
        Length = 170

 Score = 118 (46.6 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 33/128 (25%), Positives = 65/128 (50%)

Query:   163 PHVTVPDIRYIDW-AELQRRGFKGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTA-E 220
             P+ T P +   +W  +++ +G +     +N+  + +     +GI  I H  +KP   A +
Sbjct:    43 PNAT-PQLE--EWFLKMKEQGIQVTVVSNNNEQRVKDFADPLGIPFI-HSARKPFVRAFK 98

Query:   221 EIEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRKLEVTIV 280
                +    Q  +++++GD+  TD++ GNR G  TIL  P++  +   + R  RK+E  I+
Sbjct:    99 RAIREMQLQPDEVVVIGDQLLTDVLGGNRVGLHTILVVPVAQTDG-LVTRFNRKIERRIM 157

Query:   281 NRWFRRGL 288
                 ++GL
Sbjct:   158 RNMKKKGL 165


>TIGR_CMR|CHY_0622 [details] [associations]
            symbol:CHY_0622 "hydrolase, HAD subfamily IIIA"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0008152 "metabolic process" evidence=ISS] [GO:0016787
            "hydrolase activity" evidence=ISS] EMBL:CP000141
            GenomeReviews:CP000141_GR Gene3D:3.40.50.1000 InterPro:IPR023214
            SUPFAM:SSF56784 GO:GO:0016787 Pfam:PF13419 InterPro:IPR006549
            InterPro:IPR010021 TIGRFAMs:TIGR01662 TIGRFAMs:TIGR01668 KO:K07015
            RefSeq:YP_359478.1 ProteinModelPortal:Q3AEF6 STRING:Q3AEF6
            GeneID:3726534 KEGG:chy:CHY_0622 PATRIC:21274381 eggNOG:COG2179
            HOGENOM:HOG000016502 OMA:KWNTRIN BioCyc:CHYD246194:GJCN-622-MONOMER
            Uniprot:Q3AEF6
        Length = 182

 Score = 116 (45.9 bits), Expect = 3.6e-05, P = 3.6e-05
 Identities = 36/129 (27%), Positives = 67/129 (51%)

Query:   166 TVP-DIRYIDWAE-LQRRGFKGLYEYDNDASKARKLEGKIGIKVIRHRVKKPAGTA--EE 221
             T+P D+  + W + LQ  G K     +N   + R++   +GI  +   +K P   A  + 
Sbjct:    45 TIPRDV--VKWVKKLQEFGIKFCLVSNNSNERVREVAVFLGIPYVARAIK-PRRRAFLQG 101

Query:   222 IEKHFGCQSSQLIMVGDRPFTDIVYGNRNGFLTILTEPLSLAEEPFIVRQVRK-LEVTIV 280
             +E   G + S++ ++GD+  TDI+   R G + IL  P++  E  FI  ++ + +E  ++
Sbjct:   102 VEL-MGLKPSEVAVIGDQLLTDIIGAKRAGLMAILVTPMASRE--FIGTKINRFIESYLL 158

Query:   281 NRWFRRGLK 289
              R  ++GLK
Sbjct:   159 KRLLQKGLK 167


>SGD|S000001142 [details] [associations]
            symbol:GEP4 "Mitochondrial phosphatidylglycerophosphatase
            (PGP phosphatase)" species:4932 "Saccharomyces cerevisiae"
            [GO:0005743 "mitochondrial inner membrane" evidence=IEA]
            [GO:0016020 "membrane" evidence=IEA] [GO:0046838 "phosphorylated
            carbohydrate dephosphorylation" evidence=IMP] [GO:0032049
            "cardiolipin biosynthetic process" evidence=IMP] [GO:0005759
            "mitochondrial matrix" evidence=IDA] [GO:0008962
            "phosphatidylglycerophosphatase activity" evidence=IEA;IGI;IMP;IDA]
            [GO:0006655 "phosphatidylglycerol biosynthetic process"
            evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
            [GO:0008654 "phospholipid biosynthetic process" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA;IDA] UniPathway:UPA00084
            SGD:S000001142 GO:GO:0005759 Gene3D:3.40.50.1000 InterPro:IPR023214
            SUPFAM:SSF56784 EMBL:BK006934 eggNOG:COG1011 GO:GO:0031314
            EMBL:U00059 GO:GO:0032049 GO:GO:0046838 OrthoDB:EOG4BGD5F
            GO:GO:0008962 InterPro:IPR010021 Pfam:PF09419 EMBL:AY692650
            PIR:S48943 RefSeq:NP_011968.1 ProteinModelPortal:P38812 SMR:P38812
            DIP:DIP-1343N IntAct:P38812 MINT:MINT-391100 STRING:P38812
            PaxDb:P38812 PeptideAtlas:P38812 EnsemblFungi:YHR100C GeneID:856500
            KEGG:sce:YHR100C CYGD:YHR100c HOGENOM:HOG000190506 KO:K07025
            OMA:LDKDNCI NextBio:982218 Genevestigator:P38812 GermOnline:YHR100C
            TIGRFAMs:TIGR01668 Uniprot:P38812
        Length = 185

 Score = 116 (45.9 bits), Expect = 4.0e-05, P = 4.0e-05
 Identities = 43/117 (36%), Positives = 56/117 (47%)

Query:   152 VVFAKDRHLALPHVTV--PDIRYID-WAELQRR-GFKGLY--------EYDNDASKARKL 199
             VV  KD  +A PH     PD  Y+  W  L+ +   K L           D D S+A+ L
Sbjct:    42 VVLDKDNCIAFPHDDKIWPD--YLQHWETLRSKYSNKALLIVSNTAGSNSDKDYSQAKLL 99

Query:   200 EGKIGIKVIRHRVKKPAGTAEEIEKHFGCQSS-----QLIMVGDRPFTDIVYGNRNG 251
             E K GI V+RH  KKP G   EI  +F    +     ++ +VGDR FTDI+  N  G
Sbjct:   100 EDKTGIPVLRHSTKKP-GCHNEILDYFYRNKTITNPKEVAVVGDRLFTDILMANLMG 155


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.135   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      319       290   0.00089  115 3  11 22  0.37    34
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  239 KB (2130 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.66u 0.12s 26.78t   Elapsed:  00:00:01
  Total cpu time:  26.66u 0.12s 26.78t   Elapsed:  00:00:01
  Start:  Mon May 20 16:57:00 2013   End:  Mon May 20 16:57:01 2013

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