BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020938
(319 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y5K3|PCY1B_HUMAN Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B
PE=1 SV=1
Length = 369
Score = 272 bits (695), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 130/225 (57%), Positives = 166/225 (73%), Gaps = 6/225 (2%)
Query: 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTED 74
P+DRPVRVYADGI+DLFH GHAR+L QAK FPN+YLLVG C+D+ THKFKG TVM E
Sbjct: 71 TPADRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEA 130
Query: 75 ERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA 134
ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY +S DVY+ +K A
Sbjct: 131 ERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEA 188
Query: 135 GKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKK 194
G F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EKR R ++ K
Sbjct: 189 GMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKRYRFQNQVDK 248
Query: 195 LQEKVKQQQERVGEKIQTVAMHRNE----WVENADRWVAGFLEMF 235
++EKVK +ER E + V ++ W E + ++ FLE+F
Sbjct: 249 MKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELF 293
>sp|Q811Q9|PCY1B_MOUSE Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b
PE=1 SV=2
Length = 369
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/225 (57%), Positives = 165/225 (73%), Gaps = 6/225 (2%)
Query: 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTED 74
P DRPVRVYADGI+DLFH GHAR+L QAK FPN+YLLVG C+D+ THKFKG TVM E
Sbjct: 71 TPVDRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEA 130
Query: 75 ERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA 134
ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY +S DVY+ +K A
Sbjct: 131 ERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEA 188
Query: 135 GKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKK 194
G F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ R ++ K
Sbjct: 189 GMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYRFQNQVDK 248
Query: 195 LQEKVKQQQERVGEKIQTVAMHRNE----WVENADRWVAGFLEMF 235
++EKVK +ER E + V ++ W E + ++ FLE+F
Sbjct: 249 MKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELF 293
>sp|Q9QZC4|PCY1B_RAT Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus
GN=Pcyt1b PE=2 SV=1
Length = 369
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/225 (57%), Positives = 165/225 (73%), Gaps = 6/225 (2%)
Query: 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTED 74
P DRPVRVYADGI+DLFH GHAR+L QAK FPN+YLLVG C+D+ THKFKG TVM E
Sbjct: 71 TPVDRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEA 130
Query: 75 ERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA 134
ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY +S DVY+ +K A
Sbjct: 131 ERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEA 188
Query: 135 GKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKK 194
G F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ R ++ K
Sbjct: 189 GMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYRFQNQVDK 248
Query: 195 LQEKVKQQQERVGEKIQTVAMHRNE----WVENADRWVAGFLEMF 235
++EKVK +ER E + V ++ W E + ++ FLE+F
Sbjct: 249 MKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELF 293
>sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A
PE=1 SV=2
Length = 367
Score = 244 bits (624), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 164/224 (73%), Gaps = 6/224 (2%)
Query: 16 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDE 75
P +RPVRVYADGI+DLFH GHAR+L QAK FPNTYL+VG C+DE TH FKG TVM E+E
Sbjct: 72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENE 131
Query: 76 RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG 135
RY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY+ S DVY+ +K AG
Sbjct: 132 RYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYS--SAGSDDVYKHIKEAG 189
Query: 136 KFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKKL 195
F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ + ++ K+
Sbjct: 190 MFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKV 249
Query: 196 QEKVKQQQERVGEKIQTVAMHR----NEWVENADRWVAGFLEMF 235
++KVK +E+ E +Q V +W E + ++ FLEMF
Sbjct: 250 KKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMF 293
>sp|P49584|PCY1A_CRIGR Choline-phosphate cytidylyltransferase A OS=Cricetulus griseus
GN=PCYT1A PE=2 SV=1
Length = 367
Score = 244 bits (624), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/232 (51%), Positives = 162/232 (69%), Gaps = 20/232 (8%)
Query: 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTED 74
P +RPVRVYADGI+DLFH GHAR+L QAK FPNTY +VG C+DE TH FKG TVM E+
Sbjct: 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHNFKGFTVMNEN 130
Query: 75 ERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA 134
ERY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY+ S DVY+ +K A
Sbjct: 131 ERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYS--SAGSDDVYKHIKEA 188
Query: 135 GKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKK 194
G F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ + ++ K
Sbjct: 189 GMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDK 248
Query: 195 L-----------QEKVKQQQERVGEKIQTVAMHRNEWVENADRWVAGFLEMF 235
+ +E V++ +ER + IQT W E + ++ FLEMF
Sbjct: 249 VKKKVKDVEEKSKEFVQKVEERSIDLIQT-------WEEKSREFIGSFLEMF 293
>sp|P19836|PCY1A_RAT Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus
GN=Pcyt1a PE=1 SV=2
Length = 367
Score = 244 bits (623), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 164/225 (72%), Gaps = 6/225 (2%)
Query: 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTED 74
P +RPVRVYADGI+DLFH GHAR+L QAK FPNTYL+VG C+DE TH FKG TVM E+
Sbjct: 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNEN 130
Query: 75 ERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAA 134
ERY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY+ S DVY+ +K A
Sbjct: 131 ERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYS--SAGSDDVYKHIKEA 188
Query: 135 GKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKK 194
G F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ + ++ K
Sbjct: 189 GMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDK 248
Query: 195 LQEKVKQQQERVGEKIQTVAMHR----NEWVENADRWVAGFLEMF 235
+++KVK +E+ E +Q V +W E + ++ FLEMF
Sbjct: 249 VKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMF 293
>sp|P49586|PCY1A_MOUSE Choline-phosphate cytidylyltransferase A OS=Mus musculus GN=Pcyt1a
PE=1 SV=1
Length = 367
Score = 244 bits (622), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 121/224 (54%), Positives = 164/224 (73%), Gaps = 6/224 (2%)
Query: 16 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDE 75
P +RPVRVYADGI+DLFH GHAR+L QAK FPNTYL+VG C+DE TH FKG TVM E+E
Sbjct: 72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENE 131
Query: 76 RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAG 135
RY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY+ S DVY+ +K AG
Sbjct: 132 RYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYS--SAGSDDVYKHIKDAG 189
Query: 136 KFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKKL 195
F T+RT+GISTSDII RIV+DY+ Y RNL RGY+ K+L VS++ EK+ + ++ K+
Sbjct: 190 MFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKV 249
Query: 196 QEKVKQQQERVGEKIQTVAMHR----NEWVENADRWVAGFLEMF 235
++KVK +E+ E +Q V +W E + ++ FLEMF
Sbjct: 250 KKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMF 293
>sp|O74975|PCY1_SCHPO Probable choline-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1827.02c PE=1 SV=3
Length = 362
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 143/189 (75%), Gaps = 4/189 (2%)
Query: 15 APSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTED 74
P RPVRVYADG++DLFH GH R LEQAKK FPN +L+VG ND+ TH+ KG TVM +
Sbjct: 96 PPEGRPVRVYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLKGLTVMNDK 155
Query: 75 ERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYA-DASGAGKDVYEFVKA 133
ER E+LRHCKWVDEV+ +APWV+T EFL++H+IDFVAHD +PYA D SG D+Y VK
Sbjct: 156 ERAEALRHCKWVDEVLENAPWVITPEFLEEHKIDFVAHDDIPYASDDSG---DIYLPVKK 212
Query: 134 AGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLK 193
GKF TKRT+G+STSD+I RI++DY+QYVMRNL RG +RK+L VS K+ L + +K
Sbjct: 213 VGKFIPTKRTEGVSTSDLITRIIRDYDQYVMRNLARGVNRKELNVSLFKKNELDLRHHIK 272
Query: 194 KLQEKVKQQ 202
L++ ++
Sbjct: 273 VLRDTLRNH 281
>sp|P13259|PCY1_YEAST Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCT1 PE=1 SV=2
Length = 424
Score = 219 bits (559), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 166/283 (58%), Gaps = 14/283 (4%)
Query: 13 DTAPSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMT 72
+ P+DRP+R+YADG++DLFH GH + LEQ KK+FPN L+VG +D+ THK KG TV+T
Sbjct: 96 NLPPTDRPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLT 155
Query: 73 EDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVK 132
+ +R E+L HC+WVDEV+P+APW VT EFL +H+ID+VAHD +PY S D+Y+ +K
Sbjct: 156 DKQRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDYVAHDDIPYV--SADSDDIYKPIK 213
Query: 133 AAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKL 192
GKF T+RT+G+STSDII +I++DY++Y+MRN RG +R++L VS++K+ L +
Sbjct: 214 EMGKFLTTQRTNGVSTSDIITKIIRDYDKYLMRNFARGATRQELNVSWLKKNELEFKKHI 273
Query: 193 KKLQEKVKQQQERVGEKIQTVAMHRNEWVENADRWVAGFLEMFEEGCHKMGTAIR----- 247
+ + K+ Q + + + E + + ++ K R
Sbjct: 274 NEFRSYFKKNQTNLNNASRDLYFEVREILLKKTLGKKLYSKLIGNELKKQNQRQRKQNFL 333
Query: 248 -DRIQERLRGQGS------GKYLLPNGEEEEDDDEEYYYDEDD 283
D +L + S ++ N + DD + ++D
Sbjct: 334 DDPFTRKLIREASPATEFANEFTGENSTAKSPDDNGNLFSQED 376
>sp|P49583|PCY1_CAEEL Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis
elegans GN=F08C6.2 PE=2 SV=2
Length = 362
Score = 216 bits (549), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 134/182 (73%), Gaps = 2/182 (1%)
Query: 17 SDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDER 76
+ RPVR+YADGIYDLFH GHA L Q KK FPN YL+VG C D THK+KG+TV +E+ER
Sbjct: 77 AGRPVRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRTVTSEEER 136
Query: 77 YESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGK 136
Y+ +RHC++VDEV +APW T EFL ++DF+AHD++PY A G +D+YE + G
Sbjct: 137 YDGVRHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAIPYV-APGE-EDLYEKFRREGM 194
Query: 137 FKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMKLKKLQ 196
F ET+RT+G+STSD++ RI++DY++YV RNL RGYS K+L V ++ + ++ K+ L+
Sbjct: 195 FLETERTEGVSTSDVVCRIIRDYDKYVRRNLQRGYSPKELNVGFLAASKYQIQNKVDSLK 254
Query: 197 EK 198
K
Sbjct: 255 SK 256
>sp|P49587|PCY1_PLAFK Choline-phosphate cytidylyltransferase OS=Plasmodium falciparum
(isolate K1 / Thailand) GN=CTP PE=2 SV=1
Length = 370
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 146/242 (60%), Gaps = 16/242 (6%)
Query: 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYE 78
+ V +YADG+YD+ H GH + LEQAKK F NT L+VG +D T FKG+ V T +ER E
Sbjct: 90 KNVVIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQVVQTLEERTE 149
Query: 79 SLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGA--------------- 123
+L+H +WVDE+I PWVVT EFL+K++ID+VAHD +PYA+
Sbjct: 150 TLKHIRWVDEIISPCPWVVTPEFLEKYKIDYVAHDDIPYANNQKKKKKKKSKGKSFSFDE 209
Query: 124 -GKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVK 182
+D+Y ++K AGKFK T+RT+G+ST+D+I+RI+K+Y Y+ R+L RG +L + K
Sbjct: 210 ENEDIYAWLKRAGKFKATQRTEGVSTTDLIVRILKNYEDYIERSLQRGIHPNELNIGVTK 269
Query: 183 EKRLRVNMKLKKLQEKVKQQQERVGEKIQTVAMHRNEWVENADRWVAGFLEMFEEGCHKM 242
+ +++ L + EKV + +V + + ++ VEN ++++ +K+
Sbjct: 270 AQSIKMKKNLIRWGEKVTDELTKVTLTDKPLGTDFDQGVENLQVKFKELFKIWKNASNKL 329
Query: 243 GT 244
T
Sbjct: 330 IT 331
>sp|Q55BZ4|PCY2_DICDI Ethanolamine-phosphate cytidylyltransferase OS=Dictyostelium
discoideum GN=pctA PE=1 SV=1
Length = 360
Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 99/155 (63%), Gaps = 11/155 (7%)
Query: 14 TAPSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTE 73
T + +P+RVY DG +DL HFGHA +L QA++ L+VG DE K KG VM E
Sbjct: 3 TTTNKKPIRVYVDGCFDLMHFGHANALRQAREL--GDILVVGVHTDEEIAKNKGPPVMNE 60
Query: 74 DERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADAS-GA-GKDVYEFV 131
ERY+++R CKW DEV AP+ +T+E+LD DF H D S GA GKDVYE +
Sbjct: 61 QERYKAVRACKWADEVAEGAPYTLTEEYLDSLNCDFCVHGE----DISVGADGKDVYEGI 116
Query: 132 KAAGKFKETKRTDGISTSDIIMRIV---KDYNQYV 163
K +GKF+ KRT+G+ST++++ R++ KD+ Q V
Sbjct: 117 KKSGKFRFIKRTEGVSTTELVGRMLLCTKDHLQNV 151
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 16 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKT--VMTE 73
P+D+ +Y DG +DLFH GH +L+QA+ YL+VG +D H+ KG +M
Sbjct: 197 PNDK--IIYMDGGFDLFHVGHTEALKQARAL--GDYLIVGVHDDRVVHEQKGSNFPIMNL 252
Query: 74 DERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKA 133
ER S+ C++VDEV+ AP+ VT++ +D I+ V H G D Y+ +
Sbjct: 253 HERVLSVLSCRYVDEVVIGAPFSVTKDMIDSLHINVVVHGDDQVVLGPEGGVDPYKLPRE 312
Query: 134 AGKFKETKRTDGISTSDIIMRIVKDYNQYVMRN 166
G +KE K T+G++ ++I+ RI+ + QY RN
Sbjct: 313 LGIYKEVKHTEGLTATEIVKRIIDNRLQYEARN 345
>sp|Q922E4|PCY2_MOUSE Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 96/159 (60%), Gaps = 9/159 (5%)
Query: 1 MSNANSNNSNSTDTAPSD-RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCND 59
+ N + S + P D R VRV+ DG YD+ H+GH+ L QA+ YL+VG D
Sbjct: 2 IRNGHGAASAAGLKGPGDQRIVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTD 59
Query: 60 ETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH--DSLPY 117
E K KG V T++ERY+ ++ KWVDEV+P AP+V T E LDKH DF H D
Sbjct: 60 EEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKHNCDFCVHGNDITLT 119
Query: 118 ADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIV 156
D G+D YE VK AG+++E KRT G+ST+D++ R++
Sbjct: 120 VD----GRDTYEEVKQAGRYRECKRTQGVSTTDLVGRML 154
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGK--TVMTEDERYESL 80
+Y G +DLFH GH L++ K Y++ G D+ +++KGK +M ER S+
Sbjct: 234 IYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSV 293
Query: 81 RHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH---DSLPYADASGAGKDVYEFVKAAGKF 137
C++V EV+ AP+ VT E L+ ++D V H + +P D G D Y+ K G F
Sbjct: 294 LACRYVSEVVIGAPYSVTAELLNHFKVDLVCHGKTEIVPDRD----GSDPYQEPKRRGIF 349
Query: 138 KETKRTDGISTSDIIMRIVKDYNQYVMRN 166
+ ++T I+ RI+K+ +Y RN
Sbjct: 350 YQIDSGSDLTTDLIVQRIIKNRLEYEARN 378
>sp|O88637|PCY2_RAT Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 89/140 (63%), Gaps = 8/140 (5%)
Query: 19 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYE 78
R VRV+ DG YD+ H+GH+ L QA+ YL+VG DE K KG V T++ERY+
Sbjct: 21 RTVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYK 78
Query: 79 SLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH--DSLPYADASGAGKDVYEFVKAAGK 136
++ KWVDEV+P AP+V T E LDKH DF H D D G+D YE VK AG+
Sbjct: 79 MVQAIKWVDEVVPAAPYVTTLETLDKHNCDFCVHGNDITLTVD----GRDTYEEVKQAGR 134
Query: 137 FKETKRTDGISTSDIIMRIV 156
++E KRT G+ST+D++ R++
Sbjct: 135 YRECKRTQGVSTTDLVGRML 154
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 9/149 (6%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGK--TVMTEDERYESL 80
+Y G +DLFH GH L++ K Y++ G D+ +++KGK +M ER S+
Sbjct: 234 IYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSV 293
Query: 81 RHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH---DSLPYADASGAGKDVYEFVKAAGKF 137
C++V EV+ AP+ VT E L+ ++D V H + +P D G D YE K G F
Sbjct: 294 LACRYVSEVVIGAPYSVTAELLNHFKVDLVCHGKTEIVPDRD----GSDPYEEPKRRGIF 349
Query: 138 KETKRTDGISTSDIIMRIVKDYNQYVMRN 166
+ ++T I+ RI+K+ +Y RN
Sbjct: 350 CQIDSGSDLTTDLIVQRIIKNRLEYEARN 378
>sp|Q99447|PCY2_HUMAN Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens
GN=PCYT2 PE=1 SV=1
Length = 389
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 93/159 (58%), Gaps = 9/159 (5%)
Query: 1 MSNANSNNSNSTDTAPSDR-PVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCND 59
+ N + P R VRV+ DG YD+ H+GH+ L QA+ YL+VG D
Sbjct: 2 IRNGRGAAGGAEQPGPGGRRAVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTD 59
Query: 60 ETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH--DSLPY 117
E K KG V T++ERY+ ++ KWVDEV+P AP+V T E LDK+ DF H D
Sbjct: 60 EEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGNDITLT 119
Query: 118 ADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIV 156
D G+D YE VK AG+++E KRT G+ST+D++ R++
Sbjct: 120 VD----GRDTYEEVKQAGRYRECKRTQGVSTTDLVGRML 154
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGK--TVMTEDERYESL 80
+Y G +DLFH GH LE+ + Y++ G D+ + +KGK +M ER S+
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSV 275
Query: 81 RHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH---DSLPYADASGAGKDVYEFVKAAGKF 137
C++V EV+ AP+ VT E L ++D V H + +P D G D Y+ K G F
Sbjct: 276 LACRYVSEVVIGAPYAVTAELLSHFKVDLVCHGKTEIIPDRD----GSDPYQEPKRRGIF 331
Query: 138 KETKRTDGISTSDIIMRIVKDYNQYVMRN 166
++ ++T I+ RI+ + +Y RN
Sbjct: 332 RQIDSGSNLTTDLIVQRIITNRLEYEARN 360
>sp|Q5EA75|PCY2_BOVIN Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus GN=PCYT2
PE=2 SV=1
Length = 389
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 95/159 (59%), Gaps = 9/159 (5%)
Query: 1 MSNANSNNSNSTDTAP-SDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCND 59
+ N + + P + R VRV+ DG YD+ H+GH+ L QA+ +L+VG D
Sbjct: 2 IRNGHGEAGGAKRPGPRARRAVRVWCDGCYDMVHYGHSNQLRQARAM--GDHLIVGVHTD 59
Query: 60 ETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH--DSLPY 117
E K KG V T++ERY+ ++ KWVDEV+P AP+V T E LDK+ DF H D
Sbjct: 60 EEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTLETLDKYNCDFCVHGNDITLT 119
Query: 118 ADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIV 156
D G+D YE VK AG+++E KRT G+ST+D++ R++
Sbjct: 120 VD----GRDTYEEVKQAGRYRECKRTQGVSTTDLVGRML 154
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 9/149 (6%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGK--TVMTEDERYESL 80
+Y G +DLFH GH LE+ Y++ G D+ + +KGK +M ER S+
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVYGLAERPYVIAGLHFDQEVNHYKGKNYPIMNLHERTLSV 275
Query: 81 RHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAH---DSLPYADASGAGKDVYEFVKAAGKF 137
C++V EV+ AP+ VT E LD ++D V H + +P D G D YE K G F
Sbjct: 276 LACRYVSEVVIGAPYSVTAELLDHFKVDLVCHGKTEVVPDKD----GSDPYEEPKRRGIF 331
Query: 138 KETKRTDGISTSDIIMRIVKDYNQYVMRN 166
+ + ++T I+ RI+K+ +Y RN
Sbjct: 332 CQVDSGNDLTTDLIVQRIIKNRLEYEARN 360
>sp|Q8SQW6|ECT1_ENCCU Probable ethanolamine-phosphate cytidylyltransferase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=MUQ1 PE=1
SV=1
Length = 322
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 87/135 (64%), Gaps = 4/135 (2%)
Query: 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR 81
+V+ADG +D+FH+GHA +L Q+K YL+ G + + ++ KG VM ++ERYE +
Sbjct: 8 KVWADGCFDMFHYGHANALRQSKA--LGDYLIAGVHSSLSINQEKGLPVMEDEERYEVVE 65
Query: 82 HCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETK 141
C++VDEV+ DAP+V + ++ + VAH + D+S G+D Y V+ G F+E +
Sbjct: 66 GCRYVDEVVRDAPFVTQTSMIKEYGVSIVAHGNDIVLDSS--GQDSYCQVRRMGIFREVE 123
Query: 142 RTDGISTSDIIMRIV 156
RT GIST++I+ R++
Sbjct: 124 RTFGISTTEIVGRMM 138
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 13/150 (8%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKF-KGKTVMTEDERYESLR 81
V+ DG +DLFH GH SL A+ YL+VG +DETT ++ + V++ ER +L
Sbjct: 180 VFMDGNFDLFHAGHVASLRIARG--MGDYLIVGIHDDETTKEYTRSYPVLSTKERMLTLM 237
Query: 82 HCKWVDEVIPDAPWVVTQEFLDKHQIDFVA--HDSLPYADASGAGKDVYEFVKAAGKFKE 139
C++VDE++ +P++V EF+ +H ID VA DS + G KDV E A +F
Sbjct: 238 ACRYVDEIVV-SPYLVGSEFIKRHGIDVVAPSFDSKDLSRYDGI-KDVVEHSYAENRFNY 295
Query: 140 TKRTDGISTSDIIMRIVKDYNQYVMRNLDR 169
+S I+ RI+ +Y Y R R
Sbjct: 296 ------LSAEHIVNRIISNYQDYANRQKKR 319
>sp|Q9UTI6|ECT1_SCHPO Probable ethanolamine-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC15E1.05c PE=2 SV=1
Length = 365
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR 81
R++ DG D FH+GH+ ++ QAK+ L++G +DE KG VMT +ER S
Sbjct: 10 RLWLDGCMDFFHYGHSNAILQAKQL--GETLVIGIHSDEEITLNKGPPVMTLEERCLSAN 67
Query: 82 HCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETK 141
CKWVDEV+P AP+V E++ ++ +V H DA+ G D Y F KAA ++ E K
Sbjct: 68 TCKWVDEVVPSAPYVFDLEWMRRYGCQYVVHGDDISTDAN--GDDCYRFAKAADQYLEVK 125
Query: 142 RTDGISTSDIIMRIV 156
RT+G+ST++++ R++
Sbjct: 126 RTEGVSTTELLDRLL 140
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRH 82
+Y DG +DLF H +LE + FP ++ G DE + K ++ ER +L
Sbjct: 205 IYIDGDWDLFTEKHISALELCTRMFPGIPIMAGIFADEKCFE---KPMLNLLERILNLLQ 261
Query: 83 CKWVDEVIPDAP 94
CK++ ++ P
Sbjct: 262 CKYISSILVGPP 273
>sp|P33412|ECT1_YEAST Ethanolamine-phosphate cytidylyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECT1 PE=1
SV=1
Length = 323
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 4/139 (2%)
Query: 20 PVRVYADGIYDLFHFGHARSLEQAKKSFP--NTYLLVGCCNDETTHKFKGKTVMTEDERY 77
P +V+ DG +D H GHA ++ QA+++ N L G DE KG VM ERY
Sbjct: 7 PDKVWIDGCFDFTHHGHAGAILQARRTVSKENGKLFCGVHTDEDIQHNKGTPVMNSSERY 66
Query: 78 ESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
E R +W EV+ AP+V ++DK+Q +V H DA+ G+D Y+ VK G+F
Sbjct: 67 EHTRSNRWCSEVVEAAPYVTDPNWMDKYQCQYVVHGDDITIDAN--GEDCYKLVKEMGRF 124
Query: 138 KETKRTDGISTSDIIMRIV 156
K KRT G+ST++II RI+
Sbjct: 125 KVVKRTYGVSTTEIIHRIL 143
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 31/152 (20%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSF-PNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR 81
VY DG +DLFH G L + K P+ L+VG TT + T+MT ER S+
Sbjct: 200 VYVDGDFDLFHMGDIDQLRKLKMDLHPDKKLIVGI----TTSDYSS-TIMTMKERVLSVL 254
Query: 82 HCKWVDEVIPDAPWVVTQEF-LDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKET 140
CK+VD VI DA ++ +K+ I G V + AAGKF E
Sbjct: 255 SCKYVDAVIIDADATSMSQYNCEKYHI----------------GTAV---LTAAGKFSEY 295
Query: 141 KRTDGISTSDIIMRIVKDYNQYVMRNLDRGYS 172
++ I+ R+ Y+ RN +G S
Sbjct: 296 -----LTKELIVKRVESQREVYIARNQKKGMS 322
>sp|Q8RKI6|TARD_BACPZ Glycerol-3-phosphate cytidylyltransferase OS=Bacillus subtilis
subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 /
W23) GN=tarD PE=3 SV=1
Length = 129
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR 81
+V G +DLFH+GH + LE+AK YL+VG DE + + K+ + + R L
Sbjct: 3 KVITYGTFDLFHYGHMKLLERAKN--LGDYLIVGLSTDEFNLQKQKKSHHSYEHRKFILE 60
Query: 82 HCKWVDEVIPDAPWVVTQEFLDKHQID-FVAHDSLPYADASGAGKDVYEFVKAAGKFKET 140
V+EVIP+ W + KH ID FV D D G ++F+K +
Sbjct: 61 TIDLVNEVIPEKNWEQKISDIQKHDIDTFVIGD-----DWKGK----FDFLKEYCEVIYL 111
Query: 141 KRTDGISTSDI 151
RTDGIST+ I
Sbjct: 112 PRTDGISTTQI 122
>sp|Q3A526|HLDE_PELCD Bifunctional protein HldE OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=hldE PE=3 SV=1
Length = 490
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V+ +G +DL H GH + L++A++ L++G +D + + KG + +++E ER L
Sbjct: 355 VFTNGCFDLLHVGHVKYLQKARRL--GDLLVLGLNSDASIRRLKGPSRPLISEQERAHIL 412
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
+D V+ D P E +D + D + Y + GKD+ E G+
Sbjct: 413 AALSCIDYVVVFDEDTPL----ELIDTLRPDILVKGG-DYTPETVVGKDLVE--SYGGRV 465
Query: 138 KETKRTDGISTSDIIMRIVKDYNQ 161
+ DG ST++II RI+ Y Q
Sbjct: 466 ELIDLVDGRSTTNIIERILDRYEQ 489
>sp|Q9UZ37|RIBL_PYRAB FAD synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ribL PE=3
SV=1
Length = 148
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 17 SDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDE- 75
+R +RV G++D+ H GH L+ AK+ L+V +DET K KG+ + E
Sbjct: 3 GNRRIRVVVGGVFDILHVGHIHFLKMAKEL--GDELIVIVAHDETVKKRKGRPPINPAED 60
Query: 76 RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVA 111
R E LR ++VD+V+ P ++ E + K + D +A
Sbjct: 61 RAEVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIA 96
>sp|P27623|TAGD_BACSU Glycerol-3-phosphate cytidylyltransferase OS=Bacillus subtilis
(strain 168) GN=tagD PE=1 SV=1
Length = 129
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR 81
+V G +DL H+GH + LE+AK+ YL+V DE + + K + + R L
Sbjct: 3 KVITYGTFDLLHWGHIKLLERAKQL--GDYLVVAISTDEFNLQKQKKAYHSYEHRKLILE 60
Query: 82 HCKWVDEVIPDAPWVVTQEFLDKHQID-FVAHDSLPYADASGAGKDVYEFVKAAGKFKET 140
++VDEVIP+ W ++ + H ID FV D D G ++F+K +
Sbjct: 61 TIRYVDEVIPEKNWEQKKQDIIDHNIDVFVMGD-----DWEGK----FDFLKDQCEVVYL 111
Query: 141 KRTDGISTSDI 151
RT+GIST+ I
Sbjct: 112 PRTEGISTTKI 122
>sp|B6YXC8|RIBL_THEON FAD synthase OS=Thermococcus onnurineus (strain NA1) GN=ribL PE=3
SV=1
Length = 150
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGK-TVMTEDERYES 79
+RV A G++DL H GH L QAK L+V +DET K + V ++R E
Sbjct: 9 IRVLAGGVFDLLHVGHIHFLSQAKSL--GDELVVIVAHDETVRMQKRREPVNPAEDRAEL 66
Query: 80 LRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKE 139
LR K VDEV +P + E + K D VA D + + + E ++ G E
Sbjct: 67 LRALKMVDEVYIGSPGTIDYELVRKINPDIVAIGP----DQRFSCERLKEELRKHGINSE 122
Query: 140 TKRT------DGISTSDIIMRIVKDY 159
R D TS II RIV+ Y
Sbjct: 123 VIRIPYLYKEDRAKTSKIIQRIVETY 148
>sp|O58466|RIBL_PYRHO FAD synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ribL PE=3 SV=1
Length = 148
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 17 SDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDE- 75
SDR +RV G++D+ H GH L+ AK+ L+V +DET K KG+ + E
Sbjct: 3 SDRKIRVVVGGVFDIIHAGHVHFLKMAKEL--GDELIVIVAHDETVKKRKGRPPINPAED 60
Query: 76 RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVA 111
R E L+ ++VD+V+ P ++ + + + + D +A
Sbjct: 61 RAEVLKAIRYVDDVVIGKPGEISLDLIKRLKPDVIA 96
>sp|B0TTF2|HLDE_SHEHH Bifunctional protein HldE OS=Shewanella halifaxensis (strain
HAW-EB4) GN=hldE PE=3 SV=1
Length = 476
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QA+ L+V D + + K G+ V TED R L
Sbjct: 344 VMTNGCFDILHAGHVSYLQQARAL--GDRLIVAVNTDASVKRLKGEGRPVNTEDRRMTVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
VD V+P D P + L + D+ D A GA E + A
Sbjct: 402 AALASVDWVVPFTEDTPQRIISRLLPDLLVKGGDYKVEDI-----AGGA-----EVMAAG 451
Query: 135 GKFKETKRTDGISTSDIIMRIVKD 158
G+ K DGIST+ II I+ +
Sbjct: 452 GQVKVLGFEDGISTTAIIQNIMAN 475
>sp|C5A1S7|RIBL_THEGJ FAD synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM
11827 / EJ3) GN=ribL PE=3 SV=1
Length = 151
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 14 TAPS-DRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMT 72
+ PS R +RV G++D+ H GH L+QAK+ L+V +DET + K + +
Sbjct: 2 SGPSKGRKIRVLVGGVFDILHVGHVHFLKQAKEL--GDELVVIVAHDETVRRNKRRNPIN 59
Query: 73 EDE-RYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFV 131
E R E LR ++VDEV +P + E + + D +A D + + + E +
Sbjct: 60 PAEDRAELLRAIRYVDEVYIGSPGGIDFELVRRINPDVIAIGP----DQNFNCEKLKEEL 115
Query: 132 KAAGKFKETKR------TDGISTSDIIMRIVKDY 159
K G E R +D T+ II RIV+++
Sbjct: 116 KRHGIEAEVIRVPYLYKSDRAKTTKIIRRIVEEF 149
>sp|C6A439|RIBL_THESM FAD synthase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597)
GN=ribL PE=3 SV=1
Length = 148
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYES 79
+RV G++D+ H GH L+QAK+ L+V +D+T + KG + + + ER E
Sbjct: 7 IRVVTGGVFDILHVGHIHFLKQAKEL--GDELVVIVAHDKTVEERKGRRPINSMYERAEV 64
Query: 80 LRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDV------YEFVKA 133
L+ K VDEV+ P ++ E + + D +A D S +++ E ++
Sbjct: 65 LKALKMVDEVVIGEPNCISFEIVKQLNPDIIALGPDQNFDVSALKEELKKKNINAEVIRI 124
Query: 134 AGKFKETKRTDGISTSDIIMRIVKDY 159
+K +D TS II +IV+ +
Sbjct: 125 PYAYK----SDVAKTSKIIQKIVETF 146
>sp|A8H086|HLDE_SHEPA Bifunctional protein HldE OS=Shewanella pealeana (strain ATCC
700345 / ANG-SQ1) GN=hldE PE=3 SV=2
Length = 476
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QA+ L+V D + + K G+ V +ED R L
Sbjct: 344 VMTNGCFDILHAGHVSYLQQARAL--GDRLIVAVNTDASVKRLKGEGRPVNSEDRRMTVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
VD V+P D P + L + D+ D A G+ E + A
Sbjct: 402 AALASVDWVVPFSEDTPQRIISRLLPDLLVKGGDYKVEDI-----AGGS-----EVMAAG 451
Query: 135 GKFKETKRTDGISTSDIIMRIVKD 158
G+ K DGIST+ II I+ +
Sbjct: 452 GQVKVLGFEDGISTTAIIQNIMAN 475
>sp|Q39X60|HLDE_GEOMG Bifunctional protein HldE OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=hldE PE=3 SV=1
Length = 490
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V+ +G +DL H GH + L++A KS+ + L++G +D + + KG + ++ E ER L
Sbjct: 355 VFTNGCFDLLHVGHVKYLQKA-KSYGDV-LVLGLNSDASVRRLKGEKRPLIDEAERAHIL 412
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
+D V+ D P + + K + D Y GKDV E G+
Sbjct: 413 AALDCIDYVVIFDEDTPLRLIETL--KPAVLVKGGD---YTPEGVVGKDVVE--SYGGRV 465
Query: 138 KETKRTDGISTSDIIMRIVKDYNQ 161
+ DG ST++II +I++ Y +
Sbjct: 466 ELVTFVDGRSTTNIIDKILRAYGE 489
>sp|Q8TXT2|RIBL_METKA FAD synthase OS=Methanopyrus kandleri (strain AV19 / DSM 6324 /
JCM 9639 / NBRC 100938) GN=ribL PE=3 SV=1
Length = 150
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 22 RVYADGIYDLFHFGHARSLEQAKK-SFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESL 80
RV A G++D+ H GH LE+A+K + N L+V DET + K ++ E++R +
Sbjct: 4 RVLAGGVFDILHPGHVAFLEEARKIAGKNGELVVVVARDETVRRLKRTPIVPEEQRVRMV 63
Query: 81 RHCKWVDEVIPDAP 94
K VD I P
Sbjct: 64 SALKPVDRAILGHP 77
>sp|Q5JHT4|RIBL_PYRKO FAD synthase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=ribL PE=3 SV=1
Length = 149
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGK-TVMTEDERYES 79
+RV G++D+ H GH L+QAK+ L+V +DET K + + ++R E
Sbjct: 8 IRVLVGGVFDILHVGHIHFLKQAKEL--GDELVVIVAHDETVRMQKRREPINPAEDRAEL 65
Query: 80 LRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKE 139
LR ++VDEV P + E + + D +A D + + E ++ G E
Sbjct: 66 LRAIRYVDEVYIGTPGTIDMELVKRIDPDVIAIGP----DQFFNCEKLKEELRKHGINAE 121
Query: 140 TKR------TDGISTSDIIMRIVKDY 159
R +D TS II RIV+ +
Sbjct: 122 VIRIPYLYKSDRAKTSKIIQRIVETF 147
>sp|Q07Y78|HLDE_SHEFN Bifunctional protein HldE OS=Shewanella frigidimarina (strain NCIMB
400) GN=hldE PE=3 SV=1
Length = 476
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 20/142 (14%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QAK L+V +D + + K G+ V D R L
Sbjct: 344 VMTNGCFDILHAGHVSYLQQAKAL--GDRLIVAVNDDSSVTRLKGPGRPVNPVDRRMAVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQI---DFVAHDSLPYADASGAGKDVYEFVKAA 134
VD V+P D P + L + D+ D A GA E + A
Sbjct: 402 AGLASVDWVVPFTEDTPQRIITRLLPDSLVKGGDYKVEDI-----AGGA-----EVIAAG 451
Query: 135 GKFKETKRTDGISTSDIIMRIV 156
GK + DG+ST+ II I+
Sbjct: 452 GKVEVLGFEDGVSTTAIIQNIM 473
>sp|B3E5M9|HLDE_GEOLS Bifunctional protein HldE OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=hldE PE=3 SV=1
Length = 491
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V+ +G +DL H GH + L+ A++ L++G +D + + KG + ++ EDER +
Sbjct: 355 VFTNGCFDLLHAGHVKYLQAARRL--GDLLILGLNSDASVRRLKGPKRPLIDEDERGHLM 412
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
+D V D P + K QI D Y GKD+ E G+
Sbjct: 413 AALDCIDYVCLFEEDTPLELITAL--KPQILVKGGD---YTPEGVVGKDLVE--SYGGRV 465
Query: 138 KETKRTDGISTSDIIMRIVKDYN 160
+ DG ST++II ++++ Y
Sbjct: 466 ELIPFVDGKSTTNIIEKVLERYT 488
>sp|Q3IHX7|HLDE_PSEHT Bifunctional protein HldE OS=Pseudoalteromonas haloplanktis (strain
TAC 125) GN=hldE PE=3 SV=1
Length = 479
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 18/142 (12%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V+ +G +D+ H GH R L QAK L+VG ND + + KG + + DER L
Sbjct: 345 VFTNGCFDILHAGHVRYLAQAKAR--GDRLVVGLNNDASISRLKGADRPINPLDERAMVL 402
Query: 81 RHCKWVDEVIP-------DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKA 133
VD VIP D P + +++ D + Y AG + +
Sbjct: 403 SALSSVDWVIPFGSADENDTP----AKLIEQISPDILVKGG-DYTVEQIAGAE--HVLLH 455
Query: 134 AGKFKETKRTDGISTSDIIMRI 155
GK + + DG STS +I +I
Sbjct: 456 GGKVEVLEFLDGCSTSKVISKI 477
>sp|A8FZZ3|HLDE_SHESH Bifunctional protein HldE OS=Shewanella sediminis (strain HAW-EB3)
GN=hldE PE=3 SV=1
Length = 476
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFK--GKTVMTEDERYESL 80
V +G +D+ H GH L+QA++ L+V +D++ + K G+ V D R L
Sbjct: 344 VMTNGCFDILHAGHVSYLKQAREL--GDRLIVAVNDDDSVKRLKGEGRPVNQSDRRMAVL 401
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
VD V+P D P + L V D +G GK+V + A G
Sbjct: 402 AGLASVDWVVPFTEDTPQRIISRLLPDL---LVKGGDYKIEDIAG-GKEV---IAAGGSV 454
Query: 138 KETKRTDGISTSDIIMRIVKD 158
K DG+ST+ II I+ +
Sbjct: 455 KVLGFEDGVSTTSIIENIMAN 475
>sp|B5EEZ1|HLDE_GEOBB Bifunctional protein HldE OS=Geobacter bemidjiensis (strain Bem /
ATCC BAA-1014 / DSM 16622) GN=hldE PE=3 SV=1
Length = 487
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 22/146 (15%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V+ +G +DL H GH + L++A+ L+VG D + + KG + ++ E ER L
Sbjct: 355 VFTNGCFDLLHVGHVKYLQKARGL--GDILVVGLNTDASVRRLKGEKRPLIEETERAHIL 412
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQIDFVAHDSLP----YADASGAGKDVYEFVKA 133
+D V+ D P V I+ + D L Y+ G++V E
Sbjct: 413 AALDCIDYVVLFDEDTPLKV---------IETLGPDILVKGGDYSIEGVVGREVVE--AR 461
Query: 134 AGKFKETKRTDGISTSDIIMRIVKDY 159
G+ + + DG STS II +I+ Y
Sbjct: 462 GGRVELIQFVDGRSTSRIIEKILSSY 487
>sp|D3RZA9|RIBL_FERPA FAD synthase OS=Ferroglobus placidus (strain DSM 10642 /
AEDII12DO) GN=ribL PE=3 SV=1
Length = 152
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 22 RVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLR 81
+V A G +D+ H GH R LE+AKK YL+V ++ K K K +M E++R +
Sbjct: 3 KVVATGTFDIIHPGHVRFLEEAKKL--GDYLVVIVAREKNV-KHKPKPIMPEEQRRRVVE 59
Query: 82 HCKWVDEVI 90
K VDE I
Sbjct: 60 ALKPVDEAI 68
>sp|B5I9H4|RIBL_ACIB4 FAD synthase OS=Aciduliprofundum boonei (strain DSM 19572 / T469)
GN=ribL PE=3 SV=1
Length = 149
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 21 VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESL 80
VRV A G++D+ H GH L +A+K L+V D T + K K +M ED R +
Sbjct: 2 VRVMATGVFDILHPGHVLFLREARKL--GDELVVVVARDSTVERLKHKPIMNEDIRRFMV 59
Query: 81 RHCKWVDEVI 90
K VD +
Sbjct: 60 ESLKPVDRAV 69
>sp|A0RQR9|HLDE_CAMFF Bifunctional protein HldE OS=Campylobacter fetus subsp. fetus
(strain 82-40) GN=hldE PE=3 SV=1
Length = 458
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 18/138 (13%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG--KTVMTEDERYESL 80
V+ +G +D+ HFGH L+ AKK L+VG +D + + KG + V + +R L
Sbjct: 332 VFTNGCFDILHFGHISYLQSAKK--IGDMLVVGLNSDRSVKELKGDNRPVNAQSDRASML 389
Query: 81 RHCKWVDEVIP---DAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKF 137
++VD V+ D P + + D + AD +G EFV+ +
Sbjct: 390 AALEFVDFVVIFDEDTPL----NLIKTLKPDILVKG----ADYTGKKVVGSEFVR---EV 438
Query: 138 KETKRTDGISTSDIIMRI 155
K DG ST++II +I
Sbjct: 439 KLIDFVDGKSTTNIINKI 456
>sp|A7H2L7|HLDE_CAMJD Bifunctional protein HldE OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=hldE PE=3
SV=1
Length = 461
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKT--VMTEDERYESL 80
V+ +G +D+ HFGH + LE+AK+ L+VG +D + K KG++ V +E +R L
Sbjct: 333 VFTNGCFDIVHFGHIKYLEKAKRL--GDVLIVGLNSDASVKKLKGESRPVNSEFQRACML 390
Query: 81 RHCKWVDEVI 90
+VD V+
Sbjct: 391 AAFYFVDFVV 400
>sp|Q8U1T9|RIBL_PYRFU FAD synthase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 /
JCM 8422 / Vc1) GN=ribL PE=3 SV=1
Length = 148
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
Query: 29 YDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDE-RYESLRHCKWVD 87
+D+ H GH L+ AK+ L+V +DET + KG+ + E R E L+ ++VD
Sbjct: 15 FDILHVGHVHFLKMAKEL--GDELIVIVAHDETVKRRKGRPPINPAEDRAELLKSIRYVD 72
Query: 88 EVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKR----- 142
+V+ P ++ + + + + D +A D + +++ + ++ G E R
Sbjct: 73 DVVIGEPGEISIDLIKRLKPDVIALGP----DQDFSCEELKKRLRKEGINAEVIRLPYLY 128
Query: 143 -TDGISTSDIIMRIVKDY 159
+D TS II RI++ +
Sbjct: 129 KSDRAKTSKIIQRIIETF 146
>sp|A8FMK8|HLDE_CAMJ8 Bifunctional protein HldE OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=hldE PE=3
SV=1
Length = 461
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKT--VMTEDERYESL 80
V+ +G +D+ HFGH + LE+AK+ L+VG +D + + KG++ V +E +R L
Sbjct: 333 VFTNGCFDIVHFGHIKYLEKAKRL--GDVLIVGLNSDASVKRLKGESRPVNSEFQRACML 390
Query: 81 RHCKWVDEVI 90
+VD V+
Sbjct: 391 AAFYFVDFVV 400
>sp|A6UWK8|RIBL_META3 FAD synthase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC
BAA-1280) GN=ribL PE=3 SV=1
Length = 156
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKG-KTVMTEDERYESLR 81
V G +DL H GH +L+ AK L+V DET K KG K V+ E++R E +
Sbjct: 11 VLTAGTFDLLHPGHHNTLKYAKSL--GDELIVVIARDETVKKIKGRKPVIPENQRREMIE 68
Query: 82 HCKWVDEVI 90
K VD+ I
Sbjct: 69 AIKPVDKAI 77
>sp|Q6TG09|HLDE_CAMJE Bifunctional protein HldE OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=hldE PE=3 SV=2
Length = 461
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKT--VMTEDERYESL 80
V+ +G +D+ HFGH + L++AK+ L+VG +D + + KG++ V +E +R L
Sbjct: 333 VFTNGCFDIVHFGHIKYLDKAKRL--GDVLIVGLNSDASVKRLKGESRPVNSEFQRACML 390
Query: 81 RHCKWVDEVI 90
+VD V+
Sbjct: 391 AAFYFVDFVV 400
>sp|A1W0D6|HLDE_CAMJJ Bifunctional protein HldE OS=Campylobacter jejuni subsp. jejuni
serotype O:23/36 (strain 81-176) GN=hldE PE=3 SV=1
Length = 461
Score = 38.9 bits (89), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 23 VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKT 69
V+ +G +D+ HFGH + LE+AK+ L+VG +D + KG++
Sbjct: 333 VFTNGCFDIVHFGHIKYLEKAKRL--GDVLVVGLNSDASVKSLKGES 377
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,713,422
Number of Sequences: 539616
Number of extensions: 6446941
Number of successful extensions: 85067
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 870
Number of HSP's that attempted gapping in prelim test: 50374
Number of HSP's gapped (non-prelim): 18610
length of query: 319
length of database: 191,569,459
effective HSP length: 117
effective length of query: 202
effective length of database: 128,434,387
effective search space: 25943746174
effective search space used: 25943746174
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)