Query 020945
Match_columns 319
No_of_seqs 166 out of 361
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 10:29:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020945.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020945hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ap5_A GDP-fucose protein O-fu 98.8 4.1E-09 1.4E-13 102.0 7.5 166 41-226 217-383 (408)
2 3zy2_A Putative GDP-fucose pro 98.6 1.7E-07 5.9E-12 91.0 11.5 168 9-223 165-348 (362)
3 2de0_X Alpha-(1,6)-fucosyltran 97.2 0.0022 7.4E-08 65.0 12.3 145 43-223 274-421 (526)
4 2hhc_A NODZ, nodulation fucosy 96.2 0.02 6.9E-07 53.1 9.3 140 40-216 145-294 (330)
5 1wgl_A TOLL-interacting protei 61.4 4.4 0.00015 29.6 2.2 49 154-207 10-58 (59)
6 1p3q_Q VPS9P, vacuolar protein 46.5 5.6 0.00019 28.9 0.7 38 155-197 14-51 (54)
7 2ct9_A Calcium-binding protein 45.1 33 0.0011 28.2 5.4 29 231-259 111-142 (208)
8 3l32_A Phosphoprotein; antipar 44.0 11 0.00038 26.4 1.8 26 42-67 2-27 (45)
9 1s6c_A KV4 potassium channel-i 43.2 5.6 0.00019 31.9 0.3 27 235-261 97-123 (183)
10 2dhy_A CUE domain-containing p 43.1 7 0.00024 29.3 0.8 42 154-200 19-60 (67)
11 2l2e_A Calcium-binding protein 35.7 55 0.0019 26.0 5.2 112 122-260 7-129 (190)
12 3dd4_A KV channel-interacting 35.5 35 0.0012 29.0 4.2 119 121-261 45-169 (229)
13 1l2m_A REP protein; A+B fold, 29.7 57 0.0019 26.9 4.3 29 120-149 17-45 (118)
14 2ehb_A Calcineurin B-like prot 29.2 54 0.0018 26.7 4.1 115 122-259 16-140 (207)
15 3li6_A Calcium-binding protein 28.6 21 0.00073 23.5 1.3 25 234-258 40-64 (66)
16 2bec_A Calcineurin B homologou 28.1 24 0.00082 28.8 1.8 27 233-259 114-143 (202)
17 2zfd_A Calcineurin B-like prot 28.0 49 0.0017 27.8 3.8 115 123-260 28-152 (226)
18 1qjt_A EH1, epidermal growth f 27.7 60 0.0021 24.5 3.9 38 232-269 44-84 (99)
19 1fi6_A EH domain protein REPS1 27.4 44 0.0015 24.5 3.0 35 235-269 48-82 (92)
20 2kgr_A Intersectin-1; structur 25.7 50 0.0017 25.4 3.2 36 232-267 47-85 (111)
21 2g7j_A Putative cytoplasmic pr 25.4 27 0.00093 29.0 1.6 19 123-141 3-21 (124)
22 1eh2_A EPS15; calcium binding, 25.2 59 0.002 25.2 3.5 38 232-269 47-87 (106)
23 1s1e_A KV channel interacting 25.0 30 0.001 29.3 1.9 114 123-261 34-156 (224)
24 1qx2_A Vitamin D-dependent cal 23.2 62 0.0021 21.7 2.9 27 233-259 48-74 (76)
25 1f8y_A Nucleoside 2-deoxyribos 22.5 42 0.0014 28.3 2.3 21 189-209 68-88 (157)
26 2vsw_A Dual specificity protei 20.7 57 0.002 26.0 2.7 44 129-182 101-146 (153)
No 1
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A*
Probab=98.84 E-value=4.1e-09 Score=101.96 Aligned_cols=166 Identities=17% Similarity=0.227 Sum_probs=104.5
Q ss_pred cccccchhHHHHHHHHHHHHHhcCCeeEeeccchhhHHHhhcCCCCCChhHHHHHHHHHhcCcccccccCChHHHh-hCC
Q 020945 41 QGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERR-SQG 119 (319)
Q Consensus 41 ~ALrF~p~I~~lg~~lv~Rlr~~GpyiAlHLR~E~DMlAfsgC~~g~~~~e~~el~~~R~~~~~w~~k~i~~~~~R-~~G 119 (319)
..|+|++.|.+.|++.++..- +++|+++|+|...|+... |.......-. -+.--||+.... .. ...
T Consensus 217 r~l~~s~~l~~~a~~fi~~~L-~~~~~~~h~r~~~dw~~~--~~~~~~~~~~------~y~~~H~Rr~d~----~~~~~~ 283 (408)
T 4ap5_A 217 RSMVFARHLREVGDEFRSRHL-NSTDDADRIPFQEDWMKM--KVKLGSALGG------PYLGVHLRRKDF----IWGHRQ 283 (408)
T ss_dssp HTCCBCHHHHHHHHHHHHHHH-CCCTTTTTCCCCSSGGGC--CCCTTCBCCE------EEEEEEECCTTT----TTTTCS
T ss_pred HHhhhhHHHHHHHHHHHHHHh-CcccceeecccchhHhhh--hcccccccCC------Cccccccccccc----hhhhhc
Confidence 479999999999999988765 368888888888777653 4321110000 000012221100 00 112
Q ss_pred CCCCCHHHHHHHHHHcCCCCCceEEEeeccccCCccchHHHHHhCCcccccccCCCHHhhhhhhcccchhhhhHhhhhcC
Q 020945 120 LCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTA 199 (319)
Q Consensus 120 ~CPLtPeEvgl~LralGf~~~T~IYlA~geiygg~~~l~~L~~~fPnl~tKe~L~~~eEL~~f~~~ss~~AALDYiVcl~ 199 (319)
.+|-.+.-+..+.+.+-=-+-+.||||+-+. +..+..|++.+|.++.-.. ..+++..+ .....|.||-.||.+
T Consensus 284 ~~ps~~~~~~~i~~~~~~~~~~~VyiATD~~---~~~~~~l~~~~~~~~~~~~--~~~~~~~~--~d~~~a~idq~Ic~~ 356 (408)
T 4ap5_A 284 DVPSLEGAVRKIRSLMKTHRLDKVFVATDAV---RKEYEELKKLLPEMVRFEP--TWEELELY--KDGGVAIIDQWICAH 356 (408)
T ss_dssp SSCCHHHHHHHHHHHHHHHTCSCEEEEECCC---HHHHHHHHHHCTTEECCCC--CHHHHHHH--HHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHhcCCCEEEEeCCCc---hhHHHHHHHhCCCcEEecC--cchhhhcc--CcchhhHHHHHHHHh
Confidence 2333333322232222212335699998653 4557889999998764332 34555544 235689999999999
Q ss_pred CceeeecCCCchhhhhhhhhcccCCcc
Q 020945 200 SDIFIPTYDGNMAKVVEGHRRYLGFKK 226 (319)
Q Consensus 200 SDvFv~t~~GNfa~~v~GhR~y~G~~k 226 (319)
||+||+|..++|+..|.-.|.+.|+..
T Consensus 357 a~~FiGt~~StfS~~I~~eR~~~G~~~ 383 (408)
T 4ap5_A 357 ARFFIGTSVSTFSFRIHEEREILGLDP 383 (408)
T ss_dssp EEEEEBCTTCHHHHHHHHHHHHHTBCG
T ss_pred CCeeEeCCcCchhHHHHHHHHhcCCCC
Confidence 999999999999999999999999763
No 2
>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A*
Probab=98.62 E-value=1.7e-07 Score=91.04 Aligned_cols=168 Identities=18% Similarity=0.289 Sum_probs=106.1
Q ss_pred cCceEEEccCCcccccCCCC--chhhhhhhhhcccccccchhHHHHHHHHHHHHHhcCCeeEeeccchhhHHHhhcCCCC
Q 020945 9 KHKVLHFNRTDTRLANNGIP--FDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHG 86 (319)
Q Consensus 9 k~~Vi~l~~~~~RLa~~~lp--~~iQrLRCrvnf~ALrF~p~I~~lg~~lv~Rlr~~GpyiAlHLR~E~DMlAfsgC~~g 86 (319)
+|-|+.|++.-.- +--.+ -.||| -|+++++|.+.|++.++.--. .||||||||-=.|+.-. |.+-
T Consensus 165 ~~pVlAf~gaPa~--FPv~~e~r~Lqk--------Ym~WS~~i~~~a~~fI~~~L~-rpyVgIHLR~G~DW~~a--C~hl 231 (362)
T 3zy2_A 165 EYPVLAFSSAPAP--FPSKGKVWSIQK--------YLRWSSRITEQAKKFISANLA-KPFVAVHLRNDADWVRV--CEHI 231 (362)
T ss_dssp TCSEEEESSCSSC--SSCCGGGGGGGG--------GCCBCHHHHHHHHHHHHHHCC-SSEEEEEECCCHHHHHH--HHTC
T ss_pred cCceEeecCCCCC--CCcChhhHhHHH--------hccccHHHHHHHHHHHHHhcC-CCeEEEEEecCCcHHHH--Hhhh
Confidence 5667777654321 10001 25554 589999999999998888443 39999999999898755 7641
Q ss_pred CChhHHHHHHHHHhcCcccccccCChH---HHhhCCCCCCC-------H----HHHHHHHHHcCCCCCceEEEeeccccC
Q 020945 87 CSMGEAEELKRLRYAYPWWREKEIVSE---ERRSQGLCPLT-------P----EEAALVLQALGIDKDTHIYIAAGEIYG 152 (319)
Q Consensus 87 ~~~~e~~el~~~R~~~~~w~~k~i~~~---~~R~~G~CPLt-------P----eEvgl~LralGf~~~T~IYlA~geiyg 152 (319)
-..+ .+..-. +++ -+...| ||| - +.+..+++.++.+ .||||+-.
T Consensus 232 k~~~-----------~~~lfa---SPQC~Gy~~~~~--~lt~emClPSle~I~rqIk~~vk~~~lk---sVFIATDa--- 289 (362)
T 3zy2_A 232 DTTT-----------NRPLFA---SEQCLGEGHHLG--TLTKEICSPSKQQILEQIVEKVGSIGAK---SVFVASDK--- 289 (362)
T ss_dssp CTTT-----------CCCCTT---THHHHCGGGTTC--CCCHHHHSCCHHHHHHHHHHHHHHHTCS---EEEEEESS---
T ss_pred cccc-----------Cccccc---CCcccCCcccCc--ccchhccCCCHHHHHHHHHHHHHhcCCc---EEEEecCC---
Confidence 1100 000000 000 000111 333 2 2344455666644 59999965
Q ss_pred CccchHHHHHhCCcccccccCCCHHhhhhhhcccchhhhhHhhhhcCCceeeecCCCchhhhhhhhhcccC
Q 020945 153 GEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLG 223 (319)
Q Consensus 153 g~~~l~~L~~~fPnl~tKe~L~~~eEL~~f~~~ss~~AALDYiVcl~SDvFv~t~~GNfa~~v~GhR~y~G 223 (319)
+..++-|++.|+....+ +.+ ...-.|+||.+||.+||+||+|..++|+..|.-.|--.|
T Consensus 290 -~~~~~ELk~~L~~~~v~--vv~---------~~pe~a~ID~~I~~~A~~FIGN~~SSFSa~I~rERdi~G 348 (362)
T 3zy2_A 290 -DHMIDEINEALKPYEIE--AHR---------QEPDDMYTSLAIMGRADLFVGNCVSTFSHIVKRERDHAG 348 (362)
T ss_dssp -CCCHHHHHHHHGGGTCC--EEC---------CSSCCHHHHHHHHHHSSEEEECTTCHHHHHHHHHHHHSS
T ss_pred -HHHHHHHHHHhhccCce--EEE---------eCCchhHHHHHHHHhCCEeecCccccccHHHHHHHHhcC
Confidence 34688899988752111 100 001188999999999999999999999999999999888
No 3
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=97.24 E-value=0.0022 Score=64.99 Aligned_cols=145 Identities=17% Similarity=0.205 Sum_probs=89.1
Q ss_pred cccchhHHHHHHHHHHHHHhcCCeeEeeccchhhHHHhhcCCCCCChhHHHHHHHHHhcCcccccccCChHHHhhCCCCC
Q 020945 43 LKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCP 122 (319)
Q Consensus 43 LrF~p~I~~lg~~lv~Rlr~~GpyiAlHLR~E~DMlAfsgC~~g~~~~e~~el~~~R~~~~~w~~k~i~~~~~R~~G~CP 122 (319)
+|++++|++.-+.+.+.+.-.+|.|+||.|-= |-++. ....-+.+ +-+..+. .|-
T Consensus 274 ~rP~~~i~~~I~~~~~~l~~~~piVGVHIRrG-Dk~~~---E~~~~~~~-~Y~~~v~----~~~---------------- 328 (526)
T 2de0_X 274 IRPQPWLEKEIEEATKKLGFKHPVIGVHVRRT-DKVGT---EAAFHPIE-EYMVHVE----EHF---------------- 328 (526)
T ss_dssp TCBCHHHHHHHHHHHHHHTCCSSEEEEEECCC---------CCCSCSHH-HHHHHHH----HHH----------------
T ss_pred cCCCHHHHHHHHHHHHHhCCCCCEEEEEEeCC-CCCcc---ccccCCHH-HHHHHHH----HHH----------------
Confidence 78999999999999988766789999999963 33321 11111110 0011110 111
Q ss_pred CCHHHHHHHHHHcCCCCCceEEEeeccccCCccchHHHHHhCCcc--cccccCCCHHhh-hhhhcccchhhhhHhhhhcC
Q 020945 123 LTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRI--VRKEMLLDPAEL-QLFQNHSSQMAALDFMVSTA 199 (319)
Q Consensus 123 LtPeEvgl~LralGf~~~T~IYlA~geiygg~~~l~~L~~~fPnl--~tKe~L~~~eEL-~~f~~~ss~~AALDYiVcl~ 199 (319)
..|+....+..+.||||+.+. ..++-+++.||+. ++-........+ ..+...+...+.+|.++.++
T Consensus 329 -------~~l~~~~~~~~~~ifLATDDp----~v~~e~k~~~p~~~~~~d~~~~~~a~~~~R~s~~~l~~~l~DL~lLs~ 397 (526)
T 2de0_X 329 -------QLLARRMQVDKKRVYLATDDP----SLLKEAKTKYPNYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQ 397 (526)
T ss_dssp -------HHHHTTSCCSSCEEEEEESCH----HHHHHHHHHCTTSEEECCCCSSCSSGGGGGTCCTHHHHHHHHHHHHHH
T ss_pred -------HHHHhhcCCCCCeEEEEcCCH----HHHHHHHHhCCCCEEecCcccccccCccccccHHHHHHHHHHHHHHhc
Confidence 012333467788999999884 6678888889985 322211111111 11111123568899999999
Q ss_pred CceeeecCCCchhhhhhhhhcccC
Q 020945 200 SDIFIPTYDGNMAKVVEGHRRYLG 223 (319)
Q Consensus 200 SDvFv~t~~GNfa~~v~GhR~y~G 223 (319)
+|+||.|.++||++++...+.-.+
T Consensus 398 cd~~Vgt~sS~~srla~~l~~~~~ 421 (526)
T 2de0_X 398 ADFLVCTFSSQVCRVAYEIMQTLH 421 (526)
T ss_dssp SSEEEECTTSHHHHHHHHHHTTSS
T ss_pred CCeeecCCCCHHHHHHHHHhcCcC
Confidence 999999999999998887665433
No 4
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A*
Probab=96.15 E-value=0.02 Score=53.07 Aligned_cols=140 Identities=11% Similarity=0.130 Sum_probs=76.4
Q ss_pred ccccccchhHHHHHHHHHHHHHhcCCeeEeeccchhhHHHhhcCCCCCChhHH-HHHHHHHhcCcccccccCChHHHhhC
Q 020945 40 FQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEA-EELKRLRYAYPWWREKEIVSEERRSQ 118 (319)
Q Consensus 40 f~ALrF~p~I~~lg~~lv~Rlr~~GpyiAlHLR~E~DMlAfsgC~~g~~~~e~-~el~~~R~~~~~w~~k~i~~~~~R~~ 118 (319)
|+-|+++++|++..+.+.+.+-...++|+||.|.=.+. ..|.++-...+. .-++.+..
T Consensus 145 ~~yl~p~~~i~~~i~~~~~~~~~~~~~VGVHIRrgD~~---~~~~~~~~~~~~~~~l~~~~~------------------ 203 (330)
T 2hhc_A 145 FRNIKLRSEIRARIDALYEEHFSGHSIIGVHVRHGNGE---DIMEHAPYWADSELALHQVCM------------------ 203 (330)
T ss_dssp HHHSCBCHHHHHHHHHHHHHHTTTSEEEEEEECC---------------CHHHHHHHHHHHH------------------
T ss_pred HhcCCccHHHHHHHHHHHHHhccCCceEEEEEecCCCC---cccccCcchHHHhHHHHHHHH------------------
Confidence 35688999999999888866434469999999964321 123221100000 00111111
Q ss_pred CCCCCCHHHHHHHHHHc--CCC-CCceEEEeeccccCCccchHHHHHhCCcccccc-cCCCH--Hhhh-hhh-cccchhh
Q 020945 119 GLCPLTPEEAALVLQAL--GID-KDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKE-MLLDP--AELQ-LFQ-NHSSQMA 190 (319)
Q Consensus 119 G~CPLtPeEvgl~Lral--Gf~-~~T~IYlA~geiygg~~~l~~L~~~fPnl~tKe-~L~~~--eEL~-~f~-~~ss~~A 190 (319)
.++.+ -.+ .++.||||+-+. ..++-|++.||++.+-. .+... ..+- +.. ....+.+
T Consensus 204 ------------~i~~~~~~~~~~~~~vfvaSDd~----~~~~~lk~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~ 267 (330)
T 2hhc_A 204 ------------AIRKAKALSYPKPVKVFLCTDSA----QVLDQVSGLFPDVFAVPKRFQADRAGPLHSAEMGIEGGASA 267 (330)
T ss_dssp ------------HHHHHHTSCCSSCEEEEEEESCH----HHHHHHHHHSTTEECCCC-----------CHHHHHHHHHHH
T ss_pred ------------HHHHHHhccCcCceEEEEEeCCH----HHHHHHHHHcCCcccccceeecccccccccCchhhccchHH
Confidence 01100 122 467899999985 46788999999844321 11100 0000 000 1124578
Q ss_pred hhHhhhhcCCceee-ecCCCchhhhhh
Q 020945 191 ALDFMVSTASDIFI-PTYDGNMAKVVE 216 (319)
Q Consensus 191 ALDYiVcl~SDvFv-~t~~GNfa~~v~ 216 (319)
.+|.+..+.+|.+| .+..++|+-..+
T Consensus 268 ~~Dm~LLS~cd~~I~~~~~STFs~~aa 294 (330)
T 2hhc_A 268 LIDMYLLARCATVIRFPPTSAFTRYAR 294 (330)
T ss_dssp HHHHHHHTTCSEEEEESTTCGGGHHHH
T ss_pred HHHHHHHHcCCeeEECCCCCCHHHHHH
Confidence 89999999999999 545777777555
No 5
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=61.38 E-value=4.4 Score=29.59 Aligned_cols=49 Identities=20% Similarity=0.390 Sum_probs=34.3
Q ss_pred ccchHHHHHhCCcccccccCCCHHhhhhhhcccchhhhhHhhhhcCCceeeecC
Q 020945 154 EKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTY 207 (319)
Q Consensus 154 ~~~l~~L~~~fPnl~tKe~L~~~eEL~~f~~~ss~~AALDYiVcl~SDvFv~t~ 207 (319)
+..++-|++|||++ +++.+ ..-|. .+..+..+|||-...+..+-|=|++
T Consensus 10 ee~l~~L~emFP~l-d~~~I--~~vL~--a~~gdvd~aI~~LL~m~~~~~~~~~ 58 (59)
T 1wgl_A 10 EEDLKAIQDMFPNM-DQEVI--RSVLE--AQRGNKDAAINSLLQMGEEPSGPSS 58 (59)
T ss_dssp HHHHHHHHHHCSSS-CHHHH--HHHHT--TTTTCHHHHHHHHHHSSCCCCSCCC
T ss_pred HHHHHHHHHHCCCC-CHHHH--HHHHH--HcCCCHHHHHHHHHcCcCCCCCCCC
Confidence 56789999999995 34433 22232 4456789999999998877665543
No 6
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=46.45 E-value=5.6 Score=28.85 Aligned_cols=38 Identities=18% Similarity=0.280 Sum_probs=22.5
Q ss_pred cchHHHHHhCCcccccccCCCHHhhhhhhcccchhhhhHhhhh
Q 020945 155 KRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVS 197 (319)
Q Consensus 155 ~~l~~L~~~fPnl~tKe~L~~~eEL~~f~~~ss~~AALDYiVc 197 (319)
..+..|++|||++ ++|.+ .+-|. .+.+...+|||....
T Consensus 14 ~~~~~L~~MFP~l-D~evI--~~Vl~--a~~G~~~~~IdaLLq 51 (54)
T 1p3q_Q 14 DTLNTLQNMFPDM-DPSLI--EDVCI--AAASRIGPCVDALLS 51 (54)
T ss_dssp HHHHHHHHHSTTS-CHHHH--HHHHH--HSCC--CGGGC----
T ss_pred HHHHHHHHHcccC-CHHHH--HHHHH--HcCCCHHHHHHHHHh
Confidence 4578999999995 45554 33343 567788888886544
No 7
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=45.12 E-value=33 Score=28.21 Aligned_cols=29 Identities=17% Similarity=0.257 Sum_probs=20.0
Q ss_pred chHHHHHHh---hhhcCCccChhHHHHHHHHH
Q 020945 231 DRKILVGLL---DMHHNGTLSFNEFTVAVRLA 259 (319)
Q Consensus 231 drk~l~~l~---~~~~~~~~~w~~f~~~v~~~ 259 (319)
....+..+| |.-.+|.|+.+||...++.+
T Consensus 111 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~ 142 (208)
T 2ct9_A 111 RSNKLHFAFRLYDLDKDDKISRDELLQVLRMM 142 (208)
T ss_dssp HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHH
Confidence 344555555 44447899999999988765
No 8
>3l32_A Phosphoprotein; antiparallel alpha-helices, viral protein, dimerisation domain; 1.50A {Rabies virus}
Probab=44.04 E-value=11 Score=26.45 Aligned_cols=26 Identities=23% Similarity=0.540 Sum_probs=21.4
Q ss_pred ccccchhHHHHHHHHHHHHHhcCCee
Q 020945 42 GLKFTPKIETLGYELVRILQEKGPFV 67 (319)
Q Consensus 42 ALrF~p~I~~lg~~lv~Rlr~~Gpyi 67 (319)
++-|+.-+.++|.++|++|++...|.
T Consensus 2 ~vpfQs~LD~vG~qiVrkmKtGe~Ff 27 (45)
T 3l32_A 2 NLLFQSYLDNVGVQIVRQMRSGERFL 27 (45)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTCCHH
T ss_pred CccHHHHHHHHHHHHHHHHHccccHH
Confidence 45688889999999999999865553
No 9
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=43.19 E-value=5.6 Score=31.88 Aligned_cols=27 Identities=19% Similarity=0.321 Sum_probs=19.6
Q ss_pred HHHHhhhhcCCccChhHHHHHHHHHHh
Q 020945 235 LVGLLDMHHNGTLSFNEFTVAVRLAHE 261 (319)
Q Consensus 235 l~~l~~~~~~~~~~w~~f~~~v~~~h~ 261 (319)
+-..||.-.+|.|++++|...+..++.
T Consensus 97 ~f~~~D~d~~G~i~~~e~~~~~~~~~~ 123 (183)
T 1s6c_A 97 TFNLYDINKDGYINKEEMMDIVKAIYD 123 (183)
T ss_dssp HHHHHCTTCSSCEEHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHHHHH
Confidence 334445445889999999999988753
No 10
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.06 E-value=7 Score=29.31 Aligned_cols=42 Identities=14% Similarity=0.361 Sum_probs=29.0
Q ss_pred ccchHHHHHhCCcccccccCCCHHhhhhhhcccchhhhhHhhhhcCC
Q 020945 154 EKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTAS 200 (319)
Q Consensus 154 ~~~l~~L~~~fPnl~tKe~L~~~eEL~~f~~~ss~~AALDYiVcl~S 200 (319)
+..++-|++|||++ +++.| ..-|. .+..+..+|||-+..+..
T Consensus 19 ~~~v~~L~~MFP~l-D~~vI--~~vL~--a~~G~vd~aId~LL~ms~ 60 (67)
T 2dhy_A 19 NQAMDDFKTMFPNM-DYDII--ECVLR--ANSGAVDATIDQLLQMNL 60 (67)
T ss_dssp HHHHHHHHHHCSSS-CHHHH--HHHHH--HHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCC-CHHHH--HHHHH--HcCCCHHHHHHHHHhcCC
Confidence 45578999999995 34444 34444 556788999998776543
No 11
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=35.68 E-value=55 Score=26.04 Aligned_cols=112 Identities=15% Similarity=0.215 Sum_probs=56.9
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEEeeccccCCccchHHHHHhCCccc-c-cccCCCHHhhhhhhcc----cchhhhhHhh
Q 020945 122 PLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIV-R-KEMLLDPAELQLFQNH----SSQMAALDFM 195 (319)
Q Consensus 122 PLtPeEvgl~LralGf~~~T~IYlA~geiygg~~~l~~L~~~fPnl~-t-Ke~L~~~eEL~~f~~~----ss~~AALDYi 195 (319)
.|+++|+..+++++||+.. .++.+|-.+- + +.-.++.+|+..+... ......+.-+
T Consensus 7 ~l~~~el~~~~~~~~~~~~------------------el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~ 68 (190)
T 2l2e_A 7 KLSQDQLQDLVRSTRFDKK------------------ELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYV 68 (190)
T ss_dssp CSCHHHHHHHHHHHCSCSH------------------HHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHH
T ss_pred cCCHHHHHHHHHhcCCCHH------------------HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHH
Confidence 4899999999999888542 1222332221 1 3445566676544221 0111111111
Q ss_pred hhcCCceeeecCCC--chhhhhhhhhcccCCcceeecchHHHHHHh---hhhcCCccChhHHHHHHHHHH
Q 020945 196 VSTASDIFIPTYDG--NMAKVVEGHRRYLGFKKSILLDRKILVGLL---DMHHNGTLSFNEFTVAVRLAH 260 (319)
Q Consensus 196 Vcl~SDvFv~t~~G--Nfa~~v~GhR~y~G~~kTI~Pdrk~l~~l~---~~~~~~~~~w~~f~~~v~~~h 260 (319)
.. .|=...+| ++.-.+..-+.. |. .+....+..+| |.-.+|.|+++||...+..++
T Consensus 69 f~----~~D~d~~G~i~~~ef~~~~~~~-~~----~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~ 129 (190)
T 2l2e_A 69 FN----VFDADKNGYIDFKEFICALSVT-SR----GELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIY 129 (190)
T ss_dssp HH----HHCSSSTTCEEHHHHHHHHTTS-SC----SCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHH
T ss_pred HH----HhcCCCCCeEeHHHHHHHHHHH-cC----CCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHH
Confidence 11 11133455 344444443332 21 23344444444 444588999999999988753
No 12
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=35.53 E-value=35 Score=28.97 Aligned_cols=119 Identities=14% Similarity=0.219 Sum_probs=64.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCceEEEeeccccCCccchHHHHHhCCcccccccCCCHHhhhhhhcc----cchhhhhHhhh
Q 020945 121 CPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNH----SSQMAALDFMV 196 (319)
Q Consensus 121 CPLtPeEvgl~LralGf~~~T~IYlA~geiygg~~~l~~L~~~fPnl~tKe~L~~~eEL~~f~~~----ss~~AALDYiV 196 (319)
++++|+++..+.+..+|+. ..+..|...|-. .+++..++.+|+..+... .....-++-+.
T Consensus 45 ~~~~~~~l~~l~~~~~~s~---------------~ei~~l~~~F~~-~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf 108 (229)
T 3dd4_A 45 VRHRPEALELLEAQSKFTK---------------KELQILYRGFKN-ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLF 108 (229)
T ss_dssp STTHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHT-TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHH
T ss_pred ccCCHHHHHHHHHhcCCCH---------------HHHHHHHHHHHh-hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHH
Confidence 4477777777777766654 235556666644 456666777777654221 11222222222
Q ss_pred hcCCceeeecCCC--chhhhhhhhhcccCCcceeecchHHHHHHhhhhcCCccChhHHHHHHHHHHh
Q 020945 197 STASDIFIPTYDG--NMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHE 261 (319)
Q Consensus 197 cl~SDvFv~t~~G--Nfa~~v~GhR~y~G~~kTI~Pdrk~l~~l~~~~~~~~~~w~~f~~~v~~~h~ 261 (319)
.. |=...+| +|.-.+.+-..+.. .+..-.-+.+-.+||.-.+|.|+.+||...++.+..
T Consensus 109 ~~----~D~d~~G~I~~~Ef~~~l~~~~~--~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~ 169 (229)
T 3dd4_A 109 NA----FDTDHNGAVSFEDFIKGLSILLR--GTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYD 169 (229)
T ss_dssp HT----TCSSCCSSCCHHHHHHHHHHHHH--SCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHH
T ss_pred HH----cCCCCCCeEeHHHHHHHHHHHcC--CChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHH
Confidence 21 2234556 45665555444321 011111233344455556899999999999988743
No 13
>1l2m_A REP protein; A+B fold, RBD-like fold, viral protein; NMR {Tomato yellow leaf curl sardiniavirus} SCOP: d.89.1.4 PDB: 1l5i_A
Probab=29.68 E-value=57 Score=26.87 Aligned_cols=29 Identities=24% Similarity=0.379 Sum_probs=22.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCceEEEeecc
Q 020945 120 LCPLTPEEAALVLQALGIDKDTHIYIAAGE 149 (319)
Q Consensus 120 ~CPLtPeEvgl~LralGf~~~T~IYlA~ge 149 (319)
.|||++||+...|+.|--+.+ ..||....
T Consensus 17 ~c~l~Ke~~l~~l~~l~~p~~-~~yi~i~r 45 (118)
T 1l2m_A 17 KCDLTKENALSQITNLQTPTN-KLFIKICR 45 (118)
T ss_dssp TCCCCHHHHHHHHHHCCCSSC-EEEEEEEE
T ss_pred CCCCCHHHHHHHHHhhcCCcc-eeeeeehh
Confidence 699999999999999986653 55655444
No 14
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=29.16 E-value=54 Score=26.66 Aligned_cols=115 Identities=16% Similarity=0.169 Sum_probs=56.7
Q ss_pred CCCHHHHHHHHHHcCCCCCceEEEeeccccCCccchHHHHHhCCcccc---cccCCCHHhhhhhhccc-c-hhhhhHhhh
Q 020945 122 PLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVR---KEMLLDPAELQLFQNHS-S-QMAALDFMV 196 (319)
Q Consensus 122 PLtPeEvgl~LralGf~~~T~IYlA~geiygg~~~l~~L~~~fPnl~t---Ke~L~~~eEL~~f~~~s-s-~~AALDYiV 196 (319)
+++++|+..+.+..+|+. ..+.-|+..|-.+-+ +.-.++.+|+....... + ....++-++
T Consensus 16 ~l~~~el~~l~~~~~~s~---------------~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~f 80 (207)
T 2ehb_A 16 PPGYEDPELLASVTPFTV---------------EEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADRIF 80 (207)
T ss_dssp -----CHHHHHHHSSCCH---------------HHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHSCTTCCCHHHHHHH
T ss_pred ccCHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHhccccCCCCccCHHHHHHHHhccccccHHHHHHHH
Confidence 366778887777777754 234556666655432 55667777776543211 0 000111111
Q ss_pred hcCCceeeecCCC--chhhhhhhhhcccCCcceeecchHHHHHH---hhhhcCCccChhHHHHHHHHH
Q 020945 197 STASDIFIPTYDG--NMAKVVEGHRRYLGFKKSILLDRKILVGL---LDMHHNGTLSFNEFTVAVRLA 259 (319)
Q Consensus 197 cl~SDvFv~t~~G--Nfa~~v~GhR~y~G~~kTI~Pdrk~l~~l---~~~~~~~~~~w~~f~~~v~~~ 259 (319)
.. |=...+| ++.-.+...+.... . .+....+..+ ||.-.+|.|+.+||...++.+
T Consensus 81 ~~----~D~d~~g~i~~~Ef~~~~~~~~~-~---~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~ 140 (207)
T 2ehb_A 81 DV----FDVKRNGVIEFGEFVRSLGVFHP-S---APVHEKVKFAFKLYDLRQTGFIEREELKEMVVAL 140 (207)
T ss_dssp HH----HCTTCSSEECHHHHHHHHGGGST-T---SCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred HH----hcCCCCCeEeHHHHHHHHHHHcc-C---CCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 10 1123455 45555555444321 1 1223334444 454457899999999988754
No 15
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=28.57 E-value=21 Score=23.53 Aligned_cols=25 Identities=24% Similarity=0.349 Sum_probs=17.1
Q ss_pred HHHHHhhhhcCCccChhHHHHHHHH
Q 020945 234 ILVGLLDMHHNGTLSFNEFTVAVRL 258 (319)
Q Consensus 234 ~l~~l~~~~~~~~~~w~~f~~~v~~ 258 (319)
.+...+|.-.+|.|+|+||...++.
T Consensus 40 ~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 40 LIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp HHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 3344445445889999999987754
No 16
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=28.11 E-value=24 Score=28.78 Aligned_cols=27 Identities=26% Similarity=0.374 Sum_probs=18.6
Q ss_pred HHHHHHh---hhhcCCccChhHHHHHHHHH
Q 020945 233 KILVGLL---DMHHNGTLSFNEFTVAVRLA 259 (319)
Q Consensus 233 k~l~~l~---~~~~~~~~~w~~f~~~v~~~ 259 (319)
..+..+| |.-.+|.|+.+||...++.+
T Consensus 114 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~ 143 (202)
T 2bec_A 114 NKLHYAFQLYDLDRDGKISRHEMLQVLRLM 143 (202)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHS
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHh
Confidence 3444444 44447889999999888764
No 17
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=27.97 E-value=49 Score=27.76 Aligned_cols=115 Identities=14% Similarity=0.118 Sum_probs=59.1
Q ss_pred CCHHHHHHHHHHcCCCCCceEEEeeccccCCccchHHHHHhCCcccc---cccCCCHHhhhhhhccc--chhhhhHhhhh
Q 020945 123 LTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVR---KEMLLDPAELQLFQNHS--SQMAALDFMVS 197 (319)
Q Consensus 123 LtPeEvgl~LralGf~~~T~IYlA~geiygg~~~l~~L~~~fPnl~t---Ke~L~~~eEL~~f~~~s--s~~AALDYiVc 197 (319)
|+++|+..+.+..+|+. ..+.-|+..|-.+-+ +.-.++.+|+....... .....++-++.
T Consensus 28 l~~~~~~~l~~~~~ls~---------------~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~~~~~~~~~~~~~f~ 92 (226)
T 2zfd_A 28 GGLGDPELLARDTVFSV---------------SEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFD 92 (226)
T ss_dssp ----CTHHHHHHSSCCH---------------HHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCH---------------HHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhccCcccHHHHHHHHH
Confidence 55677777777777754 235667777765433 55677888886543211 10111111111
Q ss_pred cCCceeeecCCC--chhhhhhhhhcccCCcceeecchHHHHHH---hhhhcCCccChhHHHHHHHHHH
Q 020945 198 TASDIFIPTYDG--NMAKVVEGHRRYLGFKKSILLDRKILVGL---LDMHHNGTLSFNEFTVAVRLAH 260 (319)
Q Consensus 198 l~SDvFv~t~~G--Nfa~~v~GhR~y~G~~kTI~Pdrk~l~~l---~~~~~~~~~~w~~f~~~v~~~h 260 (319)
. |=...+| ++.-.+...+.... . .+....+..+ ||.-.+|.|+++||...++.+.
T Consensus 93 ~----~D~d~dG~I~~~Ef~~~~~~~~~-~---~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~ 152 (226)
T 2zfd_A 93 L----FDTKHNGILGFEEFARALSVFHP-N---APIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATL 152 (226)
T ss_dssp H----HCSSCSSSBCHHHHHHHHHHTST-T---SCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHH
T ss_pred H----HcCCCCCcCcHHHHHHHHHHHcc-C---CCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHH
Confidence 1 1123455 45555554443321 1 1223344444 4544588999999999987654
No 18
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=27.72 E-value=60 Score=24.47 Aligned_cols=38 Identities=34% Similarity=0.366 Sum_probs=27.5
Q ss_pred hHHHHHHh---hhhcCCccChhHHHHHHHHHHhhccCCCee
Q 020945 232 RKILVGLL---DMHHNGTLSFNEFTVAVRLAHEKRMGQPTR 269 (319)
Q Consensus 232 rk~l~~l~---~~~~~~~~~w~~f~~~v~~~h~~~~G~p~~ 269 (319)
...+..++ |.-.+|.|+++||...+..+.....|.|-.
T Consensus 44 ~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~~~~~g~~~~ 84 (99)
T 1qjt_A 44 DLILGKIWDLADTDGKGVLSKQEFFVALRLVACAQNGLEVS 84 (99)
T ss_dssp HHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHHHHTTTCCSS
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHcCCCCC
Confidence 34444444 434478999999999999888777787644
No 19
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=27.40 E-value=44 Score=24.55 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=25.0
Q ss_pred HHHHhhhhcCCccChhHHHHHHHHHHhhccCCCee
Q 020945 235 LVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTR 269 (319)
Q Consensus 235 l~~l~~~~~~~~~~w~~f~~~v~~~h~~~~G~p~~ 269 (319)
+...+|.-.+|.|+++||...+...+....|.|-+
T Consensus 48 i~~~~D~d~dG~i~~~EF~~~~~~~~~~~~g~~lp 82 (92)
T 1fi6_A 48 IWELSDFDKDGALTLDEFCAAFHLVVARKNGYDLP 82 (92)
T ss_dssp HHHHHCTTCSSEEEHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHHHcCCCCC
Confidence 33334444578899999999998887766676644
No 20
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=25.72 E-value=50 Score=25.42 Aligned_cols=36 Identities=31% Similarity=0.548 Sum_probs=25.5
Q ss_pred hHHHHHHh---hhhcCCccChhHHHHHHHHHHhhccCCC
Q 020945 232 RKILVGLL---DMHHNGTLSFNEFTVAVRLAHEKRMGQP 267 (319)
Q Consensus 232 rk~l~~l~---~~~~~~~~~w~~f~~~v~~~h~~~~G~p 267 (319)
...+..+| |.-.+|.|+++||...+..+...+.|.+
T Consensus 47 ~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~~~~~G~~ 85 (111)
T 2kgr_A 47 QAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVAMSGQP 85 (111)
T ss_dssp HHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHHHCCCC
Confidence 34444444 4445789999999999988877666754
No 21
>2g7j_A Putative cytoplasmic protein; STR72, autostructure, structural genomics, PSI, protein STRU initiative; NMR {Salmonella typhimurium} SCOP: d.198.5.1
Probab=25.37 E-value=27 Score=28.96 Aligned_cols=19 Identities=42% Similarity=0.634 Sum_probs=17.0
Q ss_pred CCHHHHHHHHHHcCCCCCc
Q 020945 123 LTPEEAALVLQALGIDKDT 141 (319)
Q Consensus 123 LtPeEvgl~LralGf~~~T 141 (319)
|-|.||+.+|...||..|.
T Consensus 3 LRPDEVArVLEk~GF~~D~ 21 (124)
T 2g7j_A 3 LRPDEVARVLEKAGFTVDV 21 (124)
T ss_dssp CCHHHHHHHHHHTTCEEEE
T ss_pred cChHHHHHHHHHcCceEEE
Confidence 7899999999999998753
No 22
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=25.23 E-value=59 Score=25.18 Aligned_cols=38 Identities=32% Similarity=0.401 Sum_probs=28.0
Q ss_pred hHHHHHHh---hhhcCCccChhHHHHHHHHHHhhccCCCee
Q 020945 232 RKILVGLL---DMHHNGTLSFNEFTVAVRLAHEKRMGQPTR 269 (319)
Q Consensus 232 rk~l~~l~---~~~~~~~~~w~~f~~~v~~~h~~~~G~p~~ 269 (319)
...+..++ |.-.+|.|+.+||...+..++....|.|-+
T Consensus 47 ~~el~~i~~~~D~d~dG~id~~EF~~~m~~~~~~~~g~~lP 87 (106)
T 1eh2_A 47 VDILGRVWELSDIDHDGMLDRDEFAVAMFLVYCALEKEPVP 87 (106)
T ss_dssp HHHHHHHHHHHCSSCSSBCCHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCCC
Confidence 44555555 433488999999999999988877787543
No 23
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=25.03 E-value=30 Score=29.34 Aligned_cols=114 Identities=14% Similarity=0.162 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHHcCCCCCceEEEeeccccCCccchHHHHHhCCcccccccCCCHHhhhhhhcc----cchhhhhHhhhhc
Q 020945 123 LTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNH----SSQMAALDFMVST 198 (319)
Q Consensus 123 LtPeEvgl~LralGf~~~T~IYlA~geiygg~~~l~~L~~~fPnl~tKe~L~~~eEL~~f~~~----ss~~AALDYiVcl 198 (319)
++|+|+..+++..||+. +.+.-+...|-.. ++.-.++.+|+..+... ......++-+...
T Consensus 34 l~~~~l~~l~~~~~~s~---------------~ei~~l~~~Fd~~-d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~ 97 (224)
T 1s1e_A 34 HRPEGLEQLEAQTNFTK---------------RELQVLYRGFKNE-CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNA 97 (224)
T ss_dssp ----CHHHHHHHSSCCH---------------HHHHHHHHHHHHH-CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCH---------------HHHHHHHHHHHhh-CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 77888888888877654 2234444444321 34556667777554221 0111122222111
Q ss_pred CCceeeecCCC--chhhhhhhhhcccCCcceeecchHHHHHH---hhhhcCCccChhHHHHHHHHHHh
Q 020945 199 ASDIFIPTYDG--NMAKVVEGHRRYLGFKKSILLDRKILVGL---LDMHHNGTLSFNEFTVAVRLAHE 261 (319)
Q Consensus 199 ~SDvFv~t~~G--Nfa~~v~GhR~y~G~~kTI~Pdrk~l~~l---~~~~~~~~~~w~~f~~~v~~~h~ 261 (319)
|=...+| ++.-.+..-+.... .+....+..+ ||.-.+|.|+.+||...++.+..
T Consensus 98 ----~D~d~~G~I~~~Ef~~~l~~~~~-----~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~ 156 (224)
T 1s1e_A 98 ----FDTTQTGSVKFEDFVTALSILLR-----GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYD 156 (224)
T ss_dssp ----HCTTCSSCBCHHHHHHHHHHHHH-----CCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHH
T ss_pred ----hcCCCCCcEeHHHHHHHHHHHcc-----CCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHH
Confidence 1123455 34444444333221 1233344444 45445889999999999987653
No 24
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=23.16 E-value=62 Score=21.70 Aligned_cols=27 Identities=26% Similarity=0.482 Sum_probs=19.4
Q ss_pred HHHHHHhhhhcCCccChhHHHHHHHHH
Q 020945 233 KILVGLLDMHHNGTLSFNEFTVAVRLA 259 (319)
Q Consensus 233 k~l~~l~~~~~~~~~~w~~f~~~v~~~ 259 (319)
+.+...+|.-.+|.|+|++|...+..+
T Consensus 48 ~~l~~~~D~~~~g~i~~~eF~~~~~~~ 74 (76)
T 1qx2_A 48 DEMIEEVDKNGDGEVSFEEFLVMMKKI 74 (76)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 445555565558899999999888654
No 25
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=22.48 E-value=42 Score=28.35 Aligned_cols=21 Identities=19% Similarity=0.142 Sum_probs=17.8
Q ss_pred hhhhHhhhhcCCceeeecCCC
Q 020945 189 MAALDFMVSTASDIFIPTYDG 209 (319)
Q Consensus 189 ~AALDYiVcl~SDvFv~t~~G 209 (319)
-...|.--..+||++|...+|
T Consensus 68 I~~~D~~~i~~aD~vvA~ldg 88 (157)
T 1f8y_A 68 TYNNDLNGIKTNDIMLGVYIP 88 (157)
T ss_dssp HHHHHHHHHHTSSEEEEECCG
T ss_pred HHHHhHHHHHhCCEEEEEcCC
Confidence 456788888999999999887
No 26
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=20.65 E-value=57 Score=25.96 Aligned_cols=44 Identities=23% Similarity=0.431 Sum_probs=18.7
Q ss_pred HHHHHHc--CCCCCceEEEeeccccCCccchHHHHHhCCcccccccCCCHHhhhhh
Q 020945 129 ALVLQAL--GIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLF 182 (319)
Q Consensus 129 gl~Lral--Gf~~~T~IYlA~geiygg~~~l~~L~~~fPnl~tKe~L~~~eEL~~f 182 (319)
..+|+.| ||++ +|+-.| | +..|++.||.+.+......+.++..|
T Consensus 101 ~~~L~~l~~G~~~---v~~L~G----G---~~~W~~~~~~~~~~~~~~~p~~~~~~ 146 (153)
T 2vsw_A 101 TVLLGKLEKSFNS---VHLLAG----G---FAEFSRCFPGLCEGKSTLVPTCISQP 146 (153)
T ss_dssp HHHHHHHHHHCSC---EEEETT----H---HHHHHHHCGGGEEC------------
T ss_pred HHHHHHHHhCCCc---EEEEeC----h---HHHHHHhChhhhcCCCCcCCCCCCCc
Confidence 5666655 7754 443322 2 46677777777665555445555444
Done!