BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020949
(319 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224087871|ref|XP_002308256.1| predicted protein [Populus trichocarpa]
gi|222854232|gb|EEE91779.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 181/301 (60%), Gaps = 21/301 (6%)
Query: 1 MEKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYL 60
ME + ++L +EAK+ A+A++ + + C+D+L QL K +T LLVSTQ+ + L
Sbjct: 1 MEMEFVELFDEAKKAADASLNDDVSSSGPEVTRCVDSLKQLRKFKVTSELLVSTQVGKKL 60
Query: 61 LPLTEHPTKKIQDFASDLIVSWRDMFLEQIR------DEKKGSCTIPGDTEPAKIEKVDK 114
PL +HP +KI+ ASDL+ W+ M +++ R D K +E K+EK+ K
Sbjct: 61 RPLAKHPKEKIRAVASDLLEMWKKMVIDETRKKNGSIDSKSSVKAEVSKSETVKVEKLRK 120
Query: 115 RTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEA 174
+ + + S VKV+K+DQ+ T + + EI S ++
Sbjct: 121 TSVVKVERASTSETVKVEKMDQDKTVKVEKMSKQEI--------------QTSSVKQPSQ 166
Query: 175 SGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 234
S I KL + ++CND R+ +RE + +ALSKV+ EADE+IRDEV ACD +RVA+++ES
Sbjct: 167 SPIGPPKLKTL-VKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAVSVES 225
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEML 294
MFEK GRS+G K+KYR+++ N+KD NPDFRRKVL G+V+PE +V M +EMAS++
Sbjct: 226 MMFEKLGRSNGAQKLKYRSIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGPEEMASEQRK 285
Query: 295 R 295
R
Sbjct: 286 R 286
>gi|225439709|ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/270 (42%), Positives = 171/270 (63%), Gaps = 10/270 (3%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
C+DAL QL +T L STQ+ + L LT+HP KIQ ASDL+ W+ + +++ R++
Sbjct: 34 CVDALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKVVIDETRNK 93
Query: 94 KKGSCTIPGD-------TEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVV 146
K G G TE K+E K + ++ S V VK++K D+ S++ +V
Sbjct: 94 KNGGLDNNGSAKAEVSKTETVKVEMAHKAGGVKVEKASKVETVKIEKFDRGSSTKPGSVS 153
Query: 147 RSEIVETEE-TNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDAL 205
RSE ++ E+ + D +S+ + +AS KL++ I+CND R+ VRE + +AL
Sbjct: 154 RSETIKVEKRVENVDERKQFSSVKKPPQASNGP-PKLTAM-IKCNDALRDKVRELLAEAL 211
Query: 206 SKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPD 265
KV+ EADE+I+DEVNACD +RVA+++ES MFEK GRS+G K KYR+++ N+KDP NPD
Sbjct: 212 FKVASEADEDIKDEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPD 271
Query: 266 FRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
RRKVL G+VKP+ ++ M+ +EMAS++ R
Sbjct: 272 LRRKVLLGEVKPDRLINMSPEEMASNQRQR 301
>gi|449441244|ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 174/289 (60%), Gaps = 27/289 (9%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
C+DAL QL K +T +LVSTQ+ + L LT+HP KKIQ+ ASDLI W+++ +++
Sbjct: 33 CLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQEHASDLIEMWKEIVIKETNKN 92
Query: 94 KKGSCTIPGDT--------EPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNV 145
KK D+ E K+EK K +S + + +S KV++ D+N +SS
Sbjct: 93 KKNGNASSKDSPKIGSPSAESVKVEKFQKSSSMKVERVS-----KVEQFDRNGATSSVKY 147
Query: 146 VRSEIV-------ETEETNSADNVNVGNSITEEGE-ASGIILHKLSSSKIRCNDCFREVV 197
+SE V + E+T+S V V + EE + +SG +S I+ D R+ +
Sbjct: 148 SKSESVVSERNSVKVEKTDSM--VKVERVVKEEKKPSSGAAAPPKLTSMIKSKDAARDKI 205
Query: 198 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGN 257
RE + +A SKV GEADEE DEVNA D +RVA+++ES MFE WG S G K KYR+++ N
Sbjct: 206 RELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFN 265
Query: 258 LKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
LKDPKNPDFRRKVL G +KPE ++ M+ +MASD+ R E+EE A+
Sbjct: 266 LKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQRKR----ENEEIAQ 310
>gi|224139382|ref|XP_002323085.1| predicted protein [Populus trichocarpa]
gi|222867715|gb|EEF04846.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 180/295 (61%), Gaps = 27/295 (9%)
Query: 1 MEKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYL 60
MEK++++L ++AK+ A+A++ + + + C+D+L QL K +T +LVSTQ+ + L
Sbjct: 1 MEKELVELFDKAKKAADASLNDDKSSSGPEVSRCVDSLKQLRKFKVTSEILVSTQVGKKL 60
Query: 61 LPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEEC 120
PL +HP KI+ ASDL+ +W+ + +++ +K + K+EK+ K +
Sbjct: 61 RPLAKHPKDKIRAVASDLLETWKKIVIDETMRKKNAT---------VKVEKLQKTSM--- 108
Query: 121 QEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILH 180
++S VKV+K+DQ+ T + + EI +T G
Sbjct: 109 VKVSTSETVKVEKMDQDKTVKVAQTCKEEI-QTSSVKKPSQAPTGPP------------- 154
Query: 181 KLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW 240
KL + ++CND R+ +RE + +ALSKV+ EADE+IRDEV ACD +RVA+++ESAMFEK
Sbjct: 155 KLKTL-VKCNDALRDKIRELLAEALSKVASEADEDIRDEVEACDPIRVAVSVESAMFEKL 213
Query: 241 GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
GRS+G K+KYR+++ N+KD NPD RRKVL GQV+P+ +V M +EMAS++ R
Sbjct: 214 GRSNGAQKMKYRSIMFNIKDQNNPDLRRKVLLGQVQPQRLVTMPPEEMASEQRKR 268
>gi|356509090|ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
[Glycine max]
Length = 368
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 190/310 (61%), Gaps = 17/310 (5%)
Query: 1 MEKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYL 60
MEK++++L E AK+ A+AA+ +G+ E++ CIDAL+QL K + +LV+TQ+ ++L
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGKHEESR---CIDALEQLKKFPVNYKILVNTQVGKHL 57
Query: 61 LPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEEC 120
LT+HP KI+ FA DLI W+ + +++ K G ++ + K K
Sbjct: 58 KVLTKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDSKVESANGEKSKAGKMQKSPS 117
Query: 121 QEISGVGIVKVQKVDQNSTSSSSNVVRSEI---VETEETNSADNVNVGNSITEEGEASGI 177
++ VKV+K+D+N T+ SS+ ++ V+ E+T+ + +V V EE SG
Sbjct: 118 VKVEKGETVKVEKIDRNGTTKSSSENMKKVQNDVKNEKTDRSASVKVEKIAKEEKPVSG- 176
Query: 178 ILHKLSSSK---------IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRV 228
K+SSS I+ ND R+ +RE + +ALSKV+GEADE++ D VN D +RV
Sbjct: 177 -AKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSDPIRV 235
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
A+ +ES +FEKWG S+G K+KYR+++ NLKD NPDFRRKVL G ++PE ++ M+ EM
Sbjct: 236 AVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEM 295
Query: 289 ASDEMLRSYQ 298
AS++ + YQ
Sbjct: 296 ASEQRKQEYQ 305
>gi|255637690|gb|ACU19168.1| unknown [Glycine max]
Length = 368
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 189/310 (60%), Gaps = 17/310 (5%)
Query: 1 MEKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYL 60
MEK++++L E AK+ A+AA+ +G+ E++ CIDA +QL K + +LV+TQ+ ++L
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGKHEESR---CIDAFEQLKKFPVNYKILVNTQVGKHL 57
Query: 61 LPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEEC 120
LT+HP KI+ FA DLI W+ + +++ K G ++ + K K
Sbjct: 58 KVLTKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDSKVESANGEKSKAGKMQKSPS 117
Query: 121 QEISGVGIVKVQKVDQNSTSSSSNVVRSEI---VETEETNSADNVNVGNSITEEGEASGI 177
++ VKV+K+D+N T+ SS+ ++ V+ E+T+ + +V V EE SG
Sbjct: 118 VKVEKGETVKVEKIDRNGTTKSSSENMKKVQNDVKNEKTDRSASVKVEKIAKEEKPVSG- 176
Query: 178 ILHKLSSSK---------IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRV 228
K+SSS I+ ND R+ +RE + +ALSKV+GEADE++ D VN D +RV
Sbjct: 177 -AKKMSSSSAAPPKLKTMIKSNDATRDKIREILHEALSKVTGEADEDLVDVVNNSDPIRV 235
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
A+ +ES +FEKWG S+G K+KYR+++ NLKD NPDFRRKVL G ++PE ++ M+ EM
Sbjct: 236 AVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEM 295
Query: 289 ASDEMLRSYQ 298
AS++ + YQ
Sbjct: 296 ASEQRKQEYQ 305
>gi|255575598|ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 342
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 164/259 (63%), Gaps = 19/259 (7%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
C+DAL QL I+ +LVS+Q+ + L PLT+HP +KIQ ASDL+ W+ + +++ +
Sbjct: 34 CVDALKQLKIFPISYDILVSSQVGKRLRPLTKHPREKIQTVASDLLEMWKKIVIDETTRK 93
Query: 94 KKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVET 153
K G+ VD ++S + E+S V +KV+KV + ST + R V+
Sbjct: 94 KNGT--------------VDNKSSVKA-EVSKVETIKVEKVQKASTVKVEKIDRERTVKV 138
Query: 154 EETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEAD 213
E+ + + + + +AS + KL++ ++CND R+ +RE + +ALSKV EA+
Sbjct: 139 EKKSEEKQQAI--DVKKPSQAS-VTPPKLTAI-VKCNDALRDKIRELLVEALSKVVSEAN 194
Query: 214 EEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFG 273
E+ RDE++ CD +RVA+++ESAMFEK GRS+G K KYR+++ NLKDP NPD RRKVL G
Sbjct: 195 EDGRDEISKCDPIRVAVSVESAMFEKMGRSNGAQKFKYRSIMFNLKDPNNPDLRRKVLLG 254
Query: 274 QVKPETVVGMTAKEMASDE 292
+VKPE ++ MT +EMAS E
Sbjct: 255 EVKPERLISMTPEEMASKE 273
>gi|356516223|ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like
[Glycine max]
Length = 367
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 188/310 (60%), Gaps = 18/310 (5%)
Query: 1 MEKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYL 60
MEK++++L E AK+ A+AA+ +GE E++ CIDAL+QL K + +LV+TQ+ ++L
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGEHEESR---CIDALEQLKKFPVNYKILVNTQVGKHL 57
Query: 61 LPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEEC 120
LT+HP +KI+ FA DLI W+ + +++ K G ++ + K K
Sbjct: 58 KVLTKHPRQKIKSFAIDLIEIWKGIIIKETSKNKNGGSDSKDESANREKSKAGKMQKSPS 117
Query: 121 QEISGVGIVKVQKVDQNSTSSSSNVVRSEI---VETEETNSADNVNVGNSITEEGEASGI 177
+I VKV+K+++N TS SS ++ V+ E T+ A +V + I EE SG
Sbjct: 118 VKIEKGETVKVEKIERNGTSKSSFENMKKVQNDVKNERTDRAASVKM-EKIAEEKPISG- 175
Query: 178 ILHKLSSSK---------IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRV 228
K+SSS I+ ND R+ +RE + +ALSKV+ EADE++ VN D +RV
Sbjct: 176 -AKKMSSSSTAPPKLKTMIKSNDATRDKIREILHEALSKVTREADEDLVAVVNDSDPIRV 234
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
A+ +ES +FEKWG S+G K+KYR+++ NLKD NPDFRRKVL G V+PE ++ M+ EM
Sbjct: 235 AVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEM 294
Query: 289 ASDEMLRSYQ 298
AS++ + YQ
Sbjct: 295 ASEQRKQEYQ 304
>gi|255559741|ref|XP_002520890.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223540021|gb|EEF41599.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 330
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 175/312 (56%), Gaps = 50/312 (16%)
Query: 2 EKKVMQLCEEAKRGAEAAVMAE-GEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYL 60
EK++++L E AK+ A A + E G AE++ C+DAL QL +T LLVSTQ+ + L
Sbjct: 8 EKELVELFEVAKKAAGATELEEKGGAEESR---CLDALAQLKAFPVTAQLLVSTQVGKLL 64
Query: 61 LPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSC----TIPGDTEPAKIEKVDKRT 116
PLT+H K IQD ASD+ W+ FLEQ KK T TE KIEK RT
Sbjct: 65 RPLTKHSRKNIQDLASDVFPLWKKKFLEQTSSTKKNGMLEDKTSVKSTENIKIEKT--RT 122
Query: 117 SEECQEISGVGIVKVQ-KVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEAS 175
+KV+ K + S+ VV SE
Sbjct: 123 ------------IKVEAKTEHKGEPRSAKVVESEC------------------------- 145
Query: 176 GIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESA 235
++ S +CND R+ +RE++ +AL KVS EA+EEI+ EVNACD++ VA+A+ESA
Sbjct: 146 -LLRSPRMKSIPKCNDPSRDNIREQLYEALCKVSSEANEEIQKEVNACDAIGVAVAVESA 204
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
+F WG S+G +IKYR+++ N +D KNPDFRRKVL GQVKPE + ++++EMASDE R
Sbjct: 205 LFSNWGPSNGSDRIKYRSLIFNTRDAKNPDFRRKVLLGQVKPERIAELSSEEMASDER-R 263
Query: 296 SYQHEDEERARL 307
E +E+A L
Sbjct: 264 KKNKEIKEKALL 275
>gi|255641093|gb|ACU20825.1| unknown [Glycine max]
Length = 350
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 188/310 (60%), Gaps = 18/310 (5%)
Query: 1 MEKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYL 60
MEK++++L E AK+ A+AA+ +GE E++ CIDAL+QL K + +LV+TQ+ ++L
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGEHEESR---CIDALEQLKKFPVNYKILVNTQVGKHL 57
Query: 61 LPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEEC 120
LT+HP +KI+ FA DLI W+ + +++ K G ++ + K K
Sbjct: 58 KVLTKHPRQKIKSFAIDLIEIWKGIIIKETGKNKNGGSDSKDESANREKSKAGKMQKSPS 117
Query: 121 QEISGVGIVKVQKVDQNSTSSSSNVVRSEI---VETEETNSADNVNVGNSITEEGEASGI 177
+I VKV+K+++N TS SS ++ V+ E T+ A +V + I EE SG
Sbjct: 118 VKIEKGETVKVEKIERNGTSKSSFENMKKVQNDVKNERTDRAASVKM-EKIAEEKPISGA 176
Query: 178 ILHKLSSSK---------IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRV 228
K+SSS I+ +D R+ ++E + +ALSKV+ EADE++ VN D +RV
Sbjct: 177 --KKMSSSSTAPPKLKTMIKSSDATRDKIKEILHEALSKVTREADEDLVAVVNDSDPIRV 234
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
A+ +ES +FEKWG S+G K+KYR+++ NLKD NPDFRRKVL G V+PE ++ M+ EM
Sbjct: 235 AVTVESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEM 294
Query: 289 ASDEMLRSYQ 298
AS++ + YQ
Sbjct: 295 ASEQRKQEYQ 304
>gi|388514187|gb|AFK45155.1| unknown [Medicago truncatula]
Length = 369
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 187/314 (59%), Gaps = 18/314 (5%)
Query: 5 VMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLT 64
+++L E AK+ A+A+ + + C+DAL+QL + +LV+TQ+ ++L LT
Sbjct: 9 LVELYEAAKKAADASTSTDNSPSEE--TRCLDALEQLKNFPVNYKILVNTQVGKHLKTLT 66
Query: 65 EHPTKKIQDFASDLIVSWRDMFLEQIRDEKKG---SCTIPGDTEPAKIEKVDKRTSEECQ 121
+HP + I+ FA DLI W+D+ +++ K G S + E AK K+ K S + +
Sbjct: 67 KHPRENIRTFAVDLIAIWKDVIIKETSKNKNGASDSKVESTNGERAKAGKLQKSPSVKVE 126
Query: 122 EISGVGIVKVQKVDQNSTS--SSSNVVRSEI-VETEETNSADNVNVGN----SITEEGEA 174
+ KV+KV+ N +S SS NV + V+ E+T+ N+ S ++ +
Sbjct: 127 KGESA---KVEKVNGNGSSKLSSGNVRAQNVDVKIEKTDRTSNIKAKEEKPVSAAKKISS 183
Query: 175 SGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 234
S KL + I+ ND R+ +RE + DAL+KV EADE++ DEVNACD +RVA+ +ES
Sbjct: 184 SAAAPPKLKTM-IKSNDSARDKIRELLRDALAKVFEEADEDMMDEVNACDPIRVAVTVES 242
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEML 294
+FE WG S+G K+KYR+++ NLKD KNPDFRRKVL G V+P+ + M++ EMAS++
Sbjct: 243 VLFENWGPSNGAQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRLAVMSSAEMASEQ-- 300
Query: 295 RSYQHEDEERARLW 308
R ++E E+ L+
Sbjct: 301 RKQENEKIEQKALF 314
>gi|297735532|emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 153/265 (57%), Gaps = 45/265 (16%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
C+DAL QL +T L STQ+ + L LT+HP KIQ ASDL+ W+ + +++ R++
Sbjct: 34 CVDALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKVVIDETRNK 93
Query: 94 KKGSCTIPGDTEP---AKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEI 150
K G G + +K+E V+KR V+ VD+ SS
Sbjct: 94 KNGGLDNNGSAKAEKASKVETVEKR---------------VENVDERKQFSS-------- 130
Query: 151 VETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSG 210
+ + +AS KL++ I+CND R+ VRE + +AL KV+
Sbjct: 131 -----------------VKKPPQASNGP-PKLTAM-IKCNDALRDKVRELLAEALFKVAS 171
Query: 211 EADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKV 270
EADE+I+DEVNACD +RVA+++ES MFEK GRS+G K KYR+++ N+KDP NPD RRKV
Sbjct: 172 EADEDIKDEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKV 231
Query: 271 LFGQVKPETVVGMTAKEMASDEMLR 295
L G+VKP+ ++ M+ +EMAS++ R
Sbjct: 232 LLGEVKPDRLINMSPEEMASNQRQR 256
>gi|312283193|dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]
Length = 381
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 162/284 (57%), Gaps = 26/284 (9%)
Query: 32 AWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIR 91
+ C+DAL QL K +T LV+TQ+ + L L++HP ++I+ A+DL+ W+ + +E+
Sbjct: 32 SQCLDALKQLKKFPVTYDTLVATQVGKKLRSLSKHPVEEIKSVATDLLEIWKKVVIEETS 91
Query: 92 DEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEI- 150
KK T +E AK K+D++ + + S VKVQK+ + ++ S V + E
Sbjct: 92 KAKKIGSTNGVKSETAKDGKIDRK---DVERTSNPAPVKVQKLQRGDSAKSIKVEKKEPD 148
Query: 151 ----VETEETNSADNVNVGNSITEEGEA---SGIILHKLSSSK---------------IR 188
+ E + VN G + G+ + SS+K ++
Sbjct: 149 NKVGAKIERKEQDNKVNTGAKLDHRGQTVKDEKVSKENQSSTKAPAKSPNAPPKLTSMLK 208
Query: 189 CNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYK 248
CND R+ +RE + +ALS+V GE+DE R++VN CD RVA+++ES MFEK GRS G K
Sbjct: 209 CNDPVRDKIREMLVEALSRVHGESDEYDREKVNGCDPFRVAVSVESHMFEKLGRSTGAEK 268
Query: 249 IKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
KYR+++ NL+D NPD RR+VL G+V PE ++ ++A+EMASD+
Sbjct: 269 AKYRSIMFNLRDSNNPDLRRRVLTGEVPPEKLITLSAEEMASDK 312
>gi|224286619|gb|ACN41014.1| unknown [Picea sitchensis]
Length = 328
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 156/292 (53%), Gaps = 39/292 (13%)
Query: 1 MEKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYL 60
+EK++++L E+ K+ A+ A+ E E ++ C+DAL L +T +LVSTQ+ + L
Sbjct: 7 VEKELLELFEKVKKAADKAITNEAEEQR-----CLDALKALRAVPVTMGVLVSTQVGKRL 61
Query: 61 LPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEEC 120
LT+HP + I A+DL+ SW+ + + T D + I+ D E
Sbjct: 62 RNLTKHPQENICTLATDLLDSWKKVVTSETLANSGNKATQSEDKQSKSIKVEDNAVKRES 121
Query: 121 QEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILH 180
++ + + + SSSSN G
Sbjct: 122 VKVEKKPKEEEASITNKNVSSSSN---------------------------GPP------ 148
Query: 181 KLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW 240
KL+S I+CND R+ +RE + +A SKV EA+ E +NACD VRVA+ +E+ MFEK
Sbjct: 149 KLTSM-IKCNDAVRDKIREIIYEAFSKVVNEAEGENMVRINACDPVRVAVTVETLMFEKL 207
Query: 241 GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
GRS+G K+KYR+++ NLKD NPD RR+VL G++KPE ++ MTA+EMASD+
Sbjct: 208 GRSNGAQKLKYRSIIFNLKDANNPDLRRRVLLGEIKPEKLIVMTAEEMASDQ 259
>gi|297823741|ref|XP_002879753.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297325592|gb|EFH56012.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 378
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 159/288 (55%), Gaps = 37/288 (12%)
Query: 32 AWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIR 91
+ C+DAL QL K +T LV+TQ+ + L L +HP ++I+ A+DL+ W+ + + +
Sbjct: 32 SQCLDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPIEEIKSVATDLLEIWKKVVIGETA 91
Query: 92 DEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEI- 150
KK T + AK+ K+D + S VKVQK+ + ++ S V R E
Sbjct: 92 KAKKTEGT--NGCKEAKVNKMD------VDKPSNPAPVKVQKLQRGDSAKSIKVERKEPD 143
Query: 151 ------VETEETNSADNVNVGNSITEEGEASGIILHKLS--------------------S 184
V+ E + V G I G+A + K+S +
Sbjct: 144 NKGVTGVKIERKELDNKVTNGTKIDYRGQA--VKDEKVSKDNQSSMKAPAKAPNAPPKLT 201
Query: 185 SKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSD 244
+ ++CND R+ +RE + DAL +V+GEAD+ R VNA D +RVA+++ES MFEK GRS
Sbjct: 202 AMLKCNDPVRDKIRELLVDALCRVAGEADDYERKSVNASDPLRVAVSVESLMFEKLGRST 261
Query: 245 GPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
G K+KYR+++ NL+D NPD RR+VL G++ PE ++ ++A+EMASD+
Sbjct: 262 GAQKLKYRSIMFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDK 309
>gi|15224901|ref|NP_181390.1| transcript elongation factor IIS [Arabidopsis thaliana]
gi|3786016|gb|AAC67362.1| putative elongation factor [Arabidopsis thaliana]
gi|23297820|gb|AAN13033.1| putative elongation factor [Arabidopsis thaliana]
gi|26450199|dbj|BAC42218.1| putative elongation factor [Arabidopsis thaliana]
gi|330254456|gb|AEC09550.1| transcript elongation factor IIS [Arabidopsis thaliana]
Length = 378
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 160/288 (55%), Gaps = 37/288 (12%)
Query: 32 AWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIR 91
+ CIDAL QL K +T LV+TQ+ + L L +HP + I+ A+DL+ W+ + +E+
Sbjct: 32 SQCIDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPVEDIKSVATDLLEIWKKVVIEETA 91
Query: 92 DEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEI- 150
KK T + AK+ K+D ++ S VKVQK+ + ++ S V R E
Sbjct: 92 KAKKTEGT--NGCKEAKVNKMD------VEKPSNPAPVKVQKLQRGDSAKSIKVERKEPD 143
Query: 151 ------VETEETNSADNVNVGNSITEEGEASGIILHKLS--------------------S 184
V+ E V G I G+A + K+S +
Sbjct: 144 NKVVTGVKIERKVPDIKVTNGTKIDYRGQA--VKDEKVSKDNQSSMKAPAKAANAPPKLT 201
Query: 185 SKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSD 244
+ ++CND R+ +RE + +AL +V+GEAD+ R+ VNA D +RVA+++ES MFEK GRS
Sbjct: 202 AMLKCNDPVRDKIRELLVEALCRVAGEADDYERESVNASDPLRVAVSVESLMFEKLGRST 261
Query: 245 GPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
G K+KYR+++ NL+D NPD RR+VL G++ PE ++ ++A++MASD+
Sbjct: 262 GAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMASDK 309
>gi|18377737|gb|AAL67018.1| putative elongation factor [Arabidopsis thaliana]
Length = 378
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 160/288 (55%), Gaps = 37/288 (12%)
Query: 32 AWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIR 91
+ CIDAL QL K +T LV+TQ+ + L L +HP + I+ A+DL+ W+ + +E+
Sbjct: 32 SQCIDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPVEDIKSVATDLLEIWKKVVIEETA 91
Query: 92 DEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEI- 150
KK T + AK+ K+D ++ S VKVQK+ + ++ S V R E
Sbjct: 92 KAKKTEGT--NGCKEAKVNKMD------VEKPSNPAPVKVQKLQRGDSAKSIKVERKEPD 143
Query: 151 ------VETEETNSADNVNVGNSITEEGEASGIILHKLS--------------------S 184
V+ E V G I G+A + K+S +
Sbjct: 144 NKVVTGVKIERKVPDIKVTNGTKIDYRGQA--VKDEKVSKDNQSSMKAPAKAANAPPKLT 201
Query: 185 SKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSD 244
+ ++CND R+ +RE + +AL +V+GEAD+ R+ VNA D +RVA+++ES MFEK GRS
Sbjct: 202 AMLKCNDPVRDKIRELLMEALCRVAGEADDYERESVNASDPLRVAVSVESLMFEKLGRST 261
Query: 245 GPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
G K+KYR+++ NL+D NPD RR+VL G++ PE ++ ++A++MASD+
Sbjct: 262 GAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMASDK 309
>gi|357124260|ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
[Brachypodium distachyon]
Length = 364
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 147/278 (52%), Gaps = 34/278 (12%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
C+DAL +L +T +LVSTQ+ + L LT+HP IQ A+DL W+ + +E+ +
Sbjct: 31 CLDALRRLRAFRVTTEVLVSTQVGKRLRYLTKHPHSDIQAMATDLFGYWKKIVIEETGKK 90
Query: 94 KKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGI-------------VKVQKVDQNSTS 140
S D A++EK E+ ++ V I VKV+K+ N +
Sbjct: 91 NGTSANEKLDNSAARLEKSQSMKVEKNSSLASVKIEKNDLDIRVQKSDVKVEKIANNDSK 150
Query: 141 SSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREK 200
+V ++ T +T + +V G +S +RCND R+ RE
Sbjct: 151 VKVEMVSKDVSRTLDTKKSSSVPNGPPRL--------------TSLVRCNDAARDKYREL 196
Query: 201 VCDALSKVSGEAD----EEIR---DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRA 253
+ +A KVS E EE+R DEVNACD RV++ +ESA+FE+ GRS G +K KYR+
Sbjct: 197 LAEAFFKVSKETSKDDREEVRNLLDEVNACDPYRVSVTVESALFERLGRSTGAHKAKYRS 256
Query: 254 VLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+L NLK NPDFRR+VL G+V+P +V ++ EMASD
Sbjct: 257 ILFNLKADNNPDFRRRVLLGEVRPGRLVDISPDEMASD 294
>gi|116789178|gb|ABK25146.1| unknown [Picea sitchensis]
Length = 331
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 146/265 (55%), Gaps = 34/265 (12%)
Query: 27 EKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMF 86
E+A C+DAL L +T +LVSTQ+ + L +T+HP +KI+ A++L+ +W+ +
Sbjct: 31 EEAEEQRCLDALKALRSVPVTMGILVSTQVGKRLRNVTKHPREKIRTLAAELLDAWKKVV 90
Query: 87 LEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVV 146
+ T+P + G KV+ S N
Sbjct: 91 TSE---------TLPDN---------------------GNKATKVEDKQFKSVKVEVNAS 120
Query: 147 RSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALS 206
+ E V+ E+ + ++G +++ +S KL+S I+CND R+ RE + +A S
Sbjct: 121 KGESVKVEKKPKVETESIG---SKKASSSSNGPPKLTSM-IKCNDALRDKFREILYEAFS 176
Query: 207 KVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDF 266
KV EA+ E VNACD VR+A+++E+ MFEK GRS+G K KYR+++ NLKD NPD
Sbjct: 177 KVVNEAEGEDLARVNACDPVRIAVSVETVMFEKLGRSNGAQKFKYRSIMFNLKDGNNPDL 236
Query: 267 RRKVLFGQVKPETVVGMTAKEMASD 291
RR+VL GQ+KPE ++ MTA+EMASD
Sbjct: 237 RRRVLLGQIKPEKLIVMTAEEMASD 261
>gi|115456173|ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|108711747|gb|ABF99542.1| transcription elongation factor S-II family protein, expressed
[Oryza sativa Japonica Group]
gi|113550158|dbj|BAF13601.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 158/278 (56%), Gaps = 31/278 (11%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRD- 92
C+DA+ +L +T +LVSTQ+ + L LT+HP IQ A+DL+ W+ + +E+ +
Sbjct: 31 CLDAMRRLRGLRVTTDVLVSTQVGKRLRYLTKHPHSDIQSMATDLLGYWKKVVIEEGKKN 90
Query: 93 ---EKKGSCTIPGDTEPAKIEKVDKRTSE-----ECQEISGVG----IVKVQKVDQNSTS 140
E GS E A+ KVDK ++ E +E++ G +KV+K+ N
Sbjct: 91 GTTENVGSTNSAARAEKAQPMKVDKSSASGSVKPEKREVNVRGQKPESIKVEKITNND-- 148
Query: 141 SSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREK 200
S + V+ E E T + D T++ + KL+S ++CND R+ +RE
Sbjct: 149 SKNQQVKVERAPKEATRTPD--------TKKPSSVPNGPPKLTSL-VKCNDPTRDKIREL 199
Query: 201 VCDALSKVSGEAD----EEIR---DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRA 253
+ DA S+V GE EE+R DEV+A D RVA+ +ESA+FE+ GRS G +K KYR+
Sbjct: 200 LADAFSRVHGETSKDDREEVRNILDEVDARDPFRVAVTVESALFERLGRSTGAHKAKYRS 259
Query: 254 VLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
++ NL+ N DFRR+VL GQV+PE +V ++ +EMASD
Sbjct: 260 IMFNLRADNNTDFRRRVLLGQVRPERLVDISPEEMASD 297
>gi|449499153|ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
[Cucumis sativus]
Length = 290
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 140/241 (58%), Gaps = 27/241 (11%)
Query: 82 WRDMFLEQIRDEKKGSCTIPGDT--------EPAKIEKVDKRTSEECQEISGVGIVKVQK 133
W+++ +++ KK D+ E K+EK K +S + + +S KV++
Sbjct: 2 WKEIVIKETNKNKKNGNASSKDSPKIGSPSAESVKVEKFQKSSSMKVERVS-----KVEQ 56
Query: 134 VDQNSTSSSSNVVRSEIV-------ETEETNSADNVNVGNSITEEGE-ASGIILHKLSSS 185
D+N +SS +SE V + E+T+S V V + EE + +SG +S
Sbjct: 57 FDRNGATSSVKYSKSESVVSERNSVKVEKTDSM--VKVERVVKEEKKPSSGAAAPPKLTS 114
Query: 186 KIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDG 245
I+ D R+ +RE + +A SKV GEADEE DEVNA D +RVA+++ES MFE WG S G
Sbjct: 115 MIKSKDAARDKIRELLFEAFSKVPGEADEEFMDEVNASDPIRVAVSVESVMFENWGGSTG 174
Query: 246 PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
K KYR+++ NLKDPKNPDFRRKVL G +KPE ++ M+ +MASD+ R E+EE A
Sbjct: 175 AQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASDQRKR----ENEEIA 230
Query: 306 R 306
+
Sbjct: 231 Q 231
>gi|194708758|gb|ACF88463.1| unknown [Zea mays]
Length = 376
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 155/297 (52%), Gaps = 49/297 (16%)
Query: 24 GEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWR 83
G+ + C+DAL +L + +LVSTQ+ + L PLT+HP IQ ASDL W+
Sbjct: 21 GQGDSPEAGRCLDALHRLRDIRVNTDILVSTQVGKRLRPLTKHPHSGIQAVASDLFGYWK 80
Query: 84 DMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISG-VGIVKVQKVDQNSTSSS 142
+ LE+ +K GS +E+ + SG V V+ KV++NS S+S
Sbjct: 81 KVVLEET-GKKNGSSE-----------------NEKSMDSSGKVEKVRPMKVEKNSASAS 122
Query: 143 SNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLS------------------- 183
V + ++ + DNV V + + + + ++S
Sbjct: 123 MKVEKRDV--DDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTDAKKPASVPNGPP 180
Query: 184 --SSKIRCNDCFREVVREKVCDALSKVSGEAD----EEIR---DEVNACDSVRVAIALES 234
+S ++CND R+ +RE + +A +KV E +E+R DEV+ACD RVA+ +ES
Sbjct: 181 KLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVES 240
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
A+FE++GRS G +K KYR+++ NL+ N DFRR+VL GQV PE + ++ EMASD
Sbjct: 241 ALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASD 297
>gi|226498648|ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
gi|194688540|gb|ACF78354.1| unknown [Zea mays]
gi|194707892|gb|ACF88030.1| unknown [Zea mays]
Length = 367
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 156/297 (52%), Gaps = 49/297 (16%)
Query: 24 GEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWR 83
G+ + C+DAL +L + +LVSTQ+ + L PLT+HP IQ ASDL W+
Sbjct: 21 GQGDSPEAGRCLDALHRLRDIRVNTDILVSTQVGKRLRPLTKHPHSGIQAVASDLFGYWK 80
Query: 84 DMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISG-VGIVKVQKVDQNSTSSS 142
+ LE+ +K GS +E+ + SG V V+ KV++NS S+S
Sbjct: 81 KVVLEET-GKKNGSSE-----------------NEKSMDSSGKVEKVRPMKVEKNSASAS 122
Query: 143 SNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLS------------------- 183
V + ++ + DNV V + + + + ++S
Sbjct: 123 MKVEKRDV--DDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTDAKKPASVPNGPP 180
Query: 184 --SSKIRCNDCFREVVREKVCDALSKV----SGEADEEIR---DEVNACDSVRVAIALES 234
+S ++CND R+ +RE + +A +KV S + +E+R DEV+ACD RVA+ +ES
Sbjct: 181 KLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVES 240
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
A+FE++GRS G +K KYR+++ NL+ N DFRR+VL GQV PE + ++ EMASD
Sbjct: 241 ALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASD 297
>gi|242032519|ref|XP_002463654.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
gi|241917508|gb|EER90652.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
Length = 368
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 152/279 (54%), Gaps = 32/279 (11%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
C+DAL +L + +LVSTQ+ + L PLT+HP IQ A+DL W+ + LE+ +
Sbjct: 31 CLDALRRLRDIRVNTDILVSTQVGKRLRPLTKHPHSGIQAVAADLFGYWKKVVLEESGKK 90
Query: 94 KKGS-----CTIPGDTEPAKIEKVDKRTSEECQEI---------SGVGIVKVQKVDQNST 139
GS G E + KV+K ++ ++ G VKV+K N +
Sbjct: 91 NGGSENERSSDSSGKVEKVRPMKVEKNSASASMKVEKRDVDVRGQKPGSVKVEKTASNGS 150
Query: 140 SSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVRE 199
+ S V+ E V E + + D ++ SG KL+S ++CND R+ +RE
Sbjct: 151 RTQS--VKVERVSKEVSRTPDAKKPAST------PSGA--PKLTSL-VKCNDPTRDKIRE 199
Query: 200 KVCDALSKVSGEAD----EEIR---DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYR 252
+ +A +KVS E +E+R DEV+ACD RVA+ +ESA+FE+ GRS G +K KYR
Sbjct: 200 LLAEAFAKVSRETSNDDRDEVRNILDEVDACDPYRVAVKVESALFERLGRSTGAHKTKYR 259
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+++ NL+ N DFRR+VL G+V PE + ++ EMASD
Sbjct: 260 SIMFNLRAENNTDFRRRVLIGEVTPEGLPDISPDEMASD 298
>gi|224137638|ref|XP_002322607.1| predicted protein [Populus trichocarpa]
gi|222867237|gb|EEF04368.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 169/331 (51%), Gaps = 34/331 (10%)
Query: 1 MEKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCP-LLVSTQLVRY 59
MEK+ + L E AK+ A A++A + C+DALDQL + +T +LVST + +
Sbjct: 1 MEKQFLSLFESAKKSA--AIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKE 58
Query: 60 LLPLTEHPTKKIQDFASDLIVSW-RDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSE 118
+ LT+H K I+ AS L+ +W R+++ + I G T+P K R +
Sbjct: 59 VQYLTKHRVKMIRTAASCLLDAWSRNLYAR--------NPAIDGKTQPTK-STSGSRPAT 109
Query: 119 ECQEISG--VGIVKVQKVDQ----------NSTSSSSNVVRSEIVETEETNSADNVN--- 163
+I G +G VKV Q N +S + + + ++
Sbjct: 110 LIVKIQGRVIGRVKVNMPIQTEKKIKEEKENGSSCFKKPPQDPAMHCTKPGKVQSIRRCF 169
Query: 164 ---VGNSITEEGEASGII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDE 219
IT++ K S ++C+D R VR + ++L +V+ E E++ +
Sbjct: 170 KKPSTKRITQQENVKDFCSFKKPSEEPVKCSDGLRSKVRHILVESLCRVAKEVKEDLMEA 229
Query: 220 VNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPET 279
V D + VA +ES MFE+ G +G ++KYR++L N+KDPKNPD RRKVL GQ+KPE
Sbjct: 230 VRLRDPIIVAADVESLMFERMGLFNGTKQLKYRSILFNMKDPKNPDLRRKVLLGQIKPEK 289
Query: 280 VVGMTAKEMASDEMLRSYQHEDEERARLWKE 310
+V MTA+EMAS++ R ++++ + LWKE
Sbjct: 290 LVTMTAEEMASNQ--RQFENDQIRKKSLWKE 318
>gi|115471257|ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|215737106|dbj|BAG96035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 379
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 154/286 (53%), Gaps = 45/286 (15%)
Query: 32 AWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIR 91
A C+DAL +L + +T LVSTQ+ R + LT+HP I+ ASDL+ W+ + +E+
Sbjct: 43 ARCVDALRRLRGARVTTAALVSTQIGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEE-- 100
Query: 92 DEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSN----VVR 147
D+K G+ + ++S ++ V +KV+K +T +++N VV
Sbjct: 101 DKKNGALQ-------------NGKSSSTVVKVEKVEPMKVEKASPRATVNNNNMDTRVVN 147
Query: 148 SEIVETEETNSADNVNVGNSITEEGEASGIILHKLSS---------------SKIRCNDC 192
+ + E+ ++A+ + E ++HK+SS S ++C D
Sbjct: 148 HKGGKVEKFSNAELRTQSIKV----EKVQKVVHKVSSVEKPSPVQGGPPRLTSVVKCGDA 203
Query: 193 FREVVREKVCDALSKVSGEAD----EEIRD---EVNACDSVRVAIALESAMFEKWGRSDG 245
R+ +R + DA S+VS E EE+R+ EV ACD R+A+ +E A+F+K G +G
Sbjct: 204 SRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRIAVMVECALFQKLGNFNG 263
Query: 246 PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
P K +YR+++ NLKD N DFRR+VL GQV+PE + +T EMASD
Sbjct: 264 PNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASD 309
>gi|23617251|dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|125599607|gb|EAZ39183.1| hypothetical protein OsJ_23609 [Oryza sativa Japonica Group]
Length = 373
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/286 (33%), Positives = 154/286 (53%), Gaps = 45/286 (15%)
Query: 32 AWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIR 91
A C+DAL +L + +T LVSTQ+ R + LT+HP I+ ASDL+ W+ + +E+
Sbjct: 37 ARCVDALRRLRGARVTTAALVSTQIGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEE-- 94
Query: 92 DEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSN----VVR 147
D+K G+ + ++S ++ V +KV+K +T +++N VV
Sbjct: 95 DKKNGALQ-------------NGKSSSTVVKVEKVEPMKVEKASPRATVNNNNMDTRVVN 141
Query: 148 SEIVETEETNSADNVNVGNSITEEGEASGIILHKLSS---------------SKIRCNDC 192
+ + E+ ++A+ + E ++HK+SS S ++C D
Sbjct: 142 HKGGKVEKFSNAELRTQSIKV----EKVQKVVHKVSSVEKPSPVQGGPPRLTSVVKCGDA 197
Query: 193 FREVVREKVCDALSKVSGEAD----EEIRD---EVNACDSVRVAIALESAMFEKWGRSDG 245
R+ +R + DA S+VS E EE+R+ EV ACD R+A+ +E A+F+K G +G
Sbjct: 198 SRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRIAVMVECALFQKLGNFNG 257
Query: 246 PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
P K +YR+++ NLKD N DFRR+VL GQV+PE + +T EMASD
Sbjct: 258 PNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASD 303
>gi|224094063|ref|XP_002334806.1| predicted protein [Populus trichocarpa]
gi|222875111|gb|EEF12242.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 168/331 (50%), Gaps = 34/331 (10%)
Query: 1 MEKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCP-LLVSTQLVRY 59
MEK+ + L E AK+ A A++A + C+DALDQL + +T +LVST + +
Sbjct: 1 MEKQFLSLFESAKKSA--AIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKE 58
Query: 60 LLPLTEHPTKKIQDFASDLIVSW-RDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSE 118
+ LT+H K I+ AS L+ +W R+++ + I G T+P K R
Sbjct: 59 VQYLTKHRVKMIRTAASCLLDAWSRNLYAR--------NPAIDGKTQPTK-STSGSRPGT 109
Query: 119 ECQEISG--VGIVKVQKVDQ----------NSTSSSSNVVRSEIVETEETNSADNVN--- 163
+I G +G VKV Q N +S + + + ++
Sbjct: 110 LIVKIQGRVIGRVKVNMPIQTEKKIKEEKENGSSCFKKPPQDPAMHCTKPGKVQSIRRCF 169
Query: 164 ---VGNSITEEGEASGII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDE 219
IT++ K S ++C+D R VR + ++L +V+ E E++ +
Sbjct: 170 KKPSTKRITQQENVKDFCSFKKPSEEPVKCSDGLRSKVRHILVESLCRVAKEVKEDLMEA 229
Query: 220 VNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPET 279
V D + VA +ES MFE+ G +G ++KYR++L N+KDPKNPD RRK+L GQ+KPE
Sbjct: 230 VRLRDPIIVAADVESLMFERMGLFNGTKQLKYRSILFNMKDPKNPDLRRKLLLGQIKPEK 289
Query: 280 VVGMTAKEMASDEMLRSYQHEDEERARLWKE 310
+V MTA+EMAS++ R ++++ + LWKE
Sbjct: 290 LVTMTAEEMASNQ--RQFENDQIRKKSLWKE 318
>gi|125557745|gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
Length = 373
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/286 (33%), Positives = 153/286 (53%), Gaps = 45/286 (15%)
Query: 32 AWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIR 91
A C+DAL +L + +T LVSTQ+ R + LT+HP I+ ASDL+ W+ + +E+
Sbjct: 37 ARCVDALRRLRGARVTTAALVSTQIGRRIRYLTKHPHSSIKTTASDLLGHWKKVVIEE-- 94
Query: 92 DEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSN----VVR 147
D+K G+ + ++S ++ V +KV+K +T +++N VV
Sbjct: 95 DKKNGALQ-------------NGKSSSTVVKVEKVEPMKVEKASPRATVNNNNMDTRVVN 141
Query: 148 SEIVETEETNSADNVNVGNSITEEGEASGIILHKLSS---------------SKIRCNDC 192
+ + E+ ++A+ + E ++HK+SS S ++C D
Sbjct: 142 HKGGKVEKFSNAELRTQSIKV----EKVQKVVHKVSSVEKPSPVQGGPPRLTSVVKCGDA 197
Query: 193 FREVVREKVCDALSKVSGEAD----EEIRD---EVNACDSVRVAIALESAMFEKWGRSDG 245
R+ +R + DA S+VS E EE+R+ EV ACD R+A+ +E +F+K G +G
Sbjct: 198 SRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVQACDPFRIAVMVECPLFQKLGNFNG 257
Query: 246 PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
P K +YR+++ NLKD N DFRR+VL GQV+PE + +T EMASD
Sbjct: 258 PNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASD 303
>gi|195622302|gb|ACG32981.1| transcription elongation factor A protein 2 [Zea mays]
gi|223947497|gb|ACN27832.1| unknown [Zea mays]
gi|413932648|gb|AFW67199.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 145/292 (49%), Gaps = 38/292 (13%)
Query: 24 GEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWR 83
G+ C+DAL +L + +LVSTQ+ + L PLT+HP IQ A+DL W+
Sbjct: 21 GDGNSPEAGRCLDALRRLRDIRVNTDILVSTQVGKRLRPLTKHPHSGIQAVAADLFGYWK 80
Query: 84 DMFLEQIRDEKKGS-----CTIPGDTE---PAKIEKVDKRTSEECQ----EISG--VGIV 129
+ LE+ + GS G E P KIEK S + + ++ G V
Sbjct: 81 KVVLEESGKKNGGSENERSSDSSGKVEKVRPVKIEKNSASASMKLEKRDVDVRGQKPNNV 140
Query: 130 KVQKVDQNSTSSSS---NVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSK 186
KV+K N + + S V E++ T ++ +V G H +S
Sbjct: 141 KVEKTTSNGSKAQSVKVERVSKEVIRTPDSKRPASVPNG--------------HPKLTSL 186
Query: 187 IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVN-------ACDSVRVAIALESAMFEK 239
++CND R+ +RE + +A VS E ++ RDEV ACD RVA+ +ESA+FE+
Sbjct: 187 VKCNDPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFER 246
Query: 240 WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
G S G ++ KYR+++ NL+ N DFRR+VL G V PE + + EMASD
Sbjct: 247 LGPSTGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMASD 298
>gi|168033194|ref|XP_001769101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679630|gb|EDQ66075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 158/310 (50%), Gaps = 27/310 (8%)
Query: 2 EKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLL 61
E +++ L E+A AE AV ++G A C +AL + +++ +L+STQ+ + L
Sbjct: 3 EAELVSLFEKASNAAEKAV-SDGAVLAAEEMRCQEALKAMGAVEVSTSILLSTQVGKRLR 61
Query: 62 PLTEHPTKKIQDFASDLIVSWRDMFLEQIR----DEKKGSCTI----PGDTEPAKIEKVD 113
LT+H + KI A L+ W+ + ++ K+ S TI PG T PA + K +
Sbjct: 62 KLTKHQSSKISGSAQQLLEKWKKVVADEAAIKSGTSKEVSPTIKPETPGRTPPATVVKKE 121
Query: 114 KRTSEECQEISGVGIVKVQKVD-QNSTSS----SSNVVRSEIVETEETNSADNVN-VGNS 167
+T + V K + D +N+ S S+NV S VET+ + + G S
Sbjct: 122 VKTEVK------VYTSKTSRADTKNAVPSPKVESTNVSPSPRVETKNVRAMPQPHPAGKS 175
Query: 168 ITE------EGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVN 221
T G A+G + + D R+ RE + +A K E +E V
Sbjct: 176 ATPLAPHTANGTANGSGFQPKVGNLTKAGDSTRDRFREFLIEAFKKCCSEVTDEHLAMVK 235
Query: 222 ACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVV 281
D VRVA+A+ESA+F K G+S G K KYR+++ NLKD NPDFRR++L G++KPE +
Sbjct: 236 KTDLVRVAVAVESALFSKLGQSKGSEKAKYRSIMFNLKDQNNPDFRRRILIGEIKPEEIA 295
Query: 282 GMTAKEMASD 291
MTA +MASD
Sbjct: 296 NMTADDMASD 305
>gi|226504526|ref|NP_001149284.1| transcription elongation factor A protein 2 [Zea mays]
gi|195626030|gb|ACG34845.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 142/282 (50%), Gaps = 38/282 (13%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
C+DAL +L + +LVSTQ+ + L PLT+HP IQ A+DL W+ + LE+ +
Sbjct: 31 CLDALRRLRDIRVNTDILVSTQVGKRLRPLTKHPHSGIQAVAADLFGYWKKVVLEESGKK 90
Query: 94 KKGS-----CTIPGDTEPAKIEKVDKRTSEECQEISGVGI---------VKVQKVDQNST 139
GS G E A+ K++K ++ ++ + KV+K N +
Sbjct: 91 NGGSENERSSDSSGKVEKARSVKIEKNSASASMKLEKRDVDVRGQKPNNAKVEKTTSNGS 150
Query: 140 SSSS---NVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREV 196
+ S V E++ T + +V G H +S ++CND R+
Sbjct: 151 KAQSVKVERVSKEVIRTPDAKRPASVPNG--------------HPKLTSLVKCNDPTRDK 196
Query: 197 VREKVCDALSKVSGEADEEIRDEVN-------ACDSVRVAIALESAMFEKWGRSDGPYKI 249
+RE + +A +VS E ++ RDEV A D RVA+ +ESA+FE+ G S G ++
Sbjct: 197 IRELLAEAFVRVSRETSDDDRDEVRNILDEVEARDPYRVAVTVESALFERLGPSTGTHRA 256
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
KYR+++ NL+ N DFRR+VL G V PE + ++ EMASD
Sbjct: 257 KYRSIMFNLRAESNTDFRRRVLIGLVAPERLPDVSPDEMASD 298
>gi|37718881|gb|AAR01752.1| putative transcription elongation factor, 5'-partial [Oryza sativa
Japonica Group]
Length = 315
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/255 (37%), Positives = 143/255 (56%), Gaps = 34/255 (13%)
Query: 57 VRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRD----EKKGSCTIPGDTEPAKIEKV 112
+RYL T+HP IQ A+DL+ W+ + +E+ + E GS E A+ KV
Sbjct: 5 LRYL---TKHPHSDIQSMATDLLGYWKKVVIEEGKKNGTTENVGSTNSAARAEKAQPMKV 61
Query: 113 DKRTSE-----ECQEISGVG----IVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVN 163
DK ++ E +E++ G +KV+K+ N S + V+ E E T + D
Sbjct: 62 DKSSASGSVKPEKREVNVRGQKPESIKVEKITNND--SKNQQVKVERAPKEATRTPD--- 116
Query: 164 VGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEAD----EEIR-- 217
T++ + KL+S ++CND R+ +RE + DA S+V GE EE+R
Sbjct: 117 -----TKKPSSVPNGPPKLTSL-VKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNI 170
Query: 218 -DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVK 276
DEV+A D RVA+ +ESA+FE+ GRS G +K KYR+++ NL+ N DFRR+VL GQV+
Sbjct: 171 LDEVDARDPFRVAVTVESALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVR 230
Query: 277 PETVVGMTAKEMASD 291
PE +V ++ +EMASD
Sbjct: 231 PERLVDISPEEMASD 245
>gi|414873584|tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea mays]
Length = 318
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 49/263 (18%)
Query: 58 RYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTS 117
+ L PLT+HP IQ ASDL W+ + LE+ +K GS +
Sbjct: 6 KRLRPLTKHPHSGIQAVASDLFGYWKKVVLEET-GKKNGSSE-----------------N 47
Query: 118 EECQEISG-VGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASG 176
E+ + SG V V+ KV++NS S+S V + ++ + DNV V + +
Sbjct: 48 EKSMDSSGKVEKVRPMKVEKNSASASMKVEKRDV--DDRGQKPDNVKVEKTASNGSRTQS 105
Query: 177 IILHKLS---------------------SSKIRCNDCFREVVREKVCDALSKVSGEAD-- 213
+ + ++S +S ++CND R+ +RE + +A +KV E
Sbjct: 106 VKVERVSKEVNRTDAKKPASVPNGPPKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSND 165
Query: 214 --EEIR---DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRR 268
+E+R DEV+ACD RVA+ +ESA+FE++GRS G +K KYR+++ NL+ N DFRR
Sbjct: 166 DRDEVRNILDEVDACDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRR 225
Query: 269 KVLFGQVKPETVVGMTAKEMASD 291
+VL GQV PE + ++ EMASD
Sbjct: 226 RVLIGQVTPERLPDISPDEMASD 248
>gi|255567202|ref|XP_002524582.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536135|gb|EEF37790.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 337
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 142/279 (50%), Gaps = 23/279 (8%)
Query: 34 CIDALDQLNKSDITCPLLVS---TQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQI 90
C++AL +L IT +L S + R LT+HP KI D ++ +I +W L+Q+
Sbjct: 25 CLNALSRLRCFPITFDVLASIPSVDVFRGFKALTKHPNMKIVDLSARVIAAWCKKLLKQL 84
Query: 91 RDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEI 150
+ +I +P RT+ ++ + + V K + +++ V++
Sbjct: 85 HRYEDYVSSI--QKQPCT------RTTAPSKDQTSQVVATVPKEAKIDINANPRTVKALK 136
Query: 151 VETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSG 210
V+ + +T + + K S+S RE +RE++ ALS V
Sbjct: 137 VQNKSFKKVSRTQTPKILTPHPHSKAASIPKSSNS-------LRESIREQISQALSMVFN 189
Query: 211 EADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKV 270
EA D + CD +++A +LESA+F KWG S+ + KYR++L N+KDPKNPDFRRK+
Sbjct: 190 EAKH---DTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKI 246
Query: 271 LFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWK 309
L G++K E V M A +MASDEM R +++ + LWK
Sbjct: 247 LVGEIKAEEVAEMDAGQMASDEMQR--KNQGIQAKSLWK 283
>gi|383138603|gb|AFG50480.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138604|gb|AFG50481.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138605|gb|AFG50482.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138606|gb|AFG50483.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138607|gb|AFG50484.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138608|gb|AFG50485.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138609|gb|AFG50486.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138610|gb|AFG50487.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138611|gb|AFG50488.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138612|gb|AFG50489.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138613|gb|AFG50490.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138614|gb|AFG50491.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138615|gb|AFG50492.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138616|gb|AFG50493.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138617|gb|AFG50494.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138618|gb|AFG50495.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138619|gb|AFG50496.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 80/106 (75%)
Query: 184 SSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRS 243
+S I+CND R+ RE + +ALSKV+ EA+ E VNACD VR+A+++E+ MFEK GRS
Sbjct: 32 TSMIKCNDALRDKFREILYEALSKVASEAEGEDLARVNACDPVRIAVSVETVMFEKLGRS 91
Query: 244 DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
+G K KYR+++ NLKD NPD RR+VL GQ+KPE ++ MTA+EMA
Sbjct: 92 NGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|361067733|gb|AEW08178.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 79/106 (74%)
Query: 184 SSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRS 243
+S I+CND R+ RE + +ALSKV EA+ E VNACD VR+A+++E+ MFEK GRS
Sbjct: 32 TSMIKCNDALRDKFREILYEALSKVVSEAEGEDLARVNACDPVRIAVSVETVMFEKLGRS 91
Query: 244 DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
+G K KYR+++ NLKD NPD RR+VL GQ+KPE ++ MTA+EMA
Sbjct: 92 NGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|297736471|emb|CBI25342.3| unnamed protein product [Vitis vinifera]
Length = 302
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 155/328 (47%), Gaps = 82/328 (25%)
Query: 1 MEKKVMQLCEEAKRGAEAAVMAEG---EAEKAWTAWCIDALDQLNKSDITCPLLVSTQLV 57
MEK++++L E K+ A+AA + G E E+ C+DAL QL +T +LVSTQ+
Sbjct: 1 MEKELLELFEATKKAADAAAVNSGAPSEEER-----CLDALKQLKDFPVTYQVLVSTQVG 55
Query: 58 RYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTS 117
+ L LT+HPTKKIQ ASDLI W+++ +E+ KK GD E DK +
Sbjct: 56 KRLRTLTKHPTKKIQALASDLIDIWKNIVIEETTKNKKN-----GDLE-------DKESP 103
Query: 118 EECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGI 177
+ T++ NV + +++ + N+ VG
Sbjct: 104 KPV------------------TANPENVKATPLLK-----PSHNI-VGPP---------- 129
Query: 178 ILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMF 237
KL+S +CND R+ VRE + +ALSKV GEADE+I D VNACD +RVA+++ES MF
Sbjct: 130 ---KLTSIS-KCNDALRDKVRELLSEALSKVVGEADEDIMDAVNACDPIRVAVSVESVMF 185
Query: 238 EKWGRSDGPYKIKYRAVLGNLKDPK----------------NPDFRRKVLFGQVKPETVV 281
EKW + P + L P NPD G + P
Sbjct: 186 EKWDTPEAPPFLSLGTCLSTSPFPSTLNPSHSPTPSGILSLNPDSHT----GLLNP-VAA 240
Query: 282 GMTAKEMASDEMLRSYQHEDE-ERARLW 308
GMTA S + R DE E+ R+W
Sbjct: 241 GMTAT--FSLQRPRGLLDSDEMEQRRVW 266
>gi|224086771|ref|XP_002307957.1| predicted protein [Populus trichocarpa]
gi|222853933|gb|EEE91480.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
+K S ++C+D R VR + ++L++V+ E + +R V++ D + VA +ES MF+
Sbjct: 267 FNKPSKEPVKCDDALRGKVRSILVESLTRVAKETEAGLRRAVSSRDPICVAADVESVMFQ 326
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQ 298
K G +G +KYR+VL NLKDPKNPD RRKVL GQ+KPE +V MT++EMAS+ R ++
Sbjct: 327 KMGAFNGAKTVKYRSVLFNLKDPKNPDLRRKVLLGQIKPEKLVTMTSEEMASNH--RQFE 384
Query: 299 HEDEERARLWKEHTR 313
+ L KE +
Sbjct: 385 NAQIRMKSLLKEKKK 399
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 1 MEKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSD-ITCPLLVSTQLVRY 59
ME++ + L E AK A+AAV + + C+ AL QL + I+ +L+ T + +
Sbjct: 1 MEQQFLSLFESAKTSADAAVTSSSMIPEVH--RCLAALGQLKRFPVISSRVLLFTPVAKQ 58
Query: 60 LLPLTEHPTKKIQDFASDLIVSWR 83
+ LT HP K I+ AS L+ +WR
Sbjct: 59 VECLTRHPVKMIKTAASCLLYTWR 82
>gi|147860975|emb|CAN82941.1| hypothetical protein VITISV_013128 [Vitis vinifera]
Length = 326
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 114/235 (48%), Gaps = 60/235 (25%)
Query: 58 RYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTS 117
+ L LT+HPTKKIQ ASDLI W+++ +E+ KK GD E DK +
Sbjct: 66 KRLRTLTKHPTKKIQALASDLIDIWKNIVIEETTKNKKN-----GDLE-------DKESP 113
Query: 118 EECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGI 177
+ T++ NV + +++ + A+N+ V + + S
Sbjct: 114 KPV------------------TANPENVKATPLLKV---SKAENIKVEKQTSGVKKPSHN 152
Query: 178 ILHKLSSSKI-RCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM 236
I+ + I +CND R+ VRE + +ALSKV GEADE+I D VNACD +RVA+
Sbjct: 153 IVGPPKLTSISKCNDALRDKVRELLSEALSKVVGEADEDIMDAVNACDPIRVAV------ 206
Query: 237 FEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
F D KNPD RRKVL GQV PE ++ M +EMASD
Sbjct: 207 FS--------------------GDAKNPDLRRKVLLGQVMPERLLEMGPEEMASD 241
>gi|168041433|ref|XP_001773196.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675555|gb|EDQ62049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 353
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 9/290 (3%)
Query: 2 EKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLL 61
E +++ E+A + A+ AV + G A C + L + +++ LL+STQ+ + L
Sbjct: 3 EAELVSFFEKACKAADRAV-SNGAILPAEEVRCQETLKAMGAVEVSTALLLSTQVGKRLR 61
Query: 62 PLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQ 121
LT+H + KI A L+ W+ + + DE P D P + RTS
Sbjct: 62 KLTKHQSSKISASAQQLLEEWKKV----VADEAASRSGTPKDASPVIKPETPARTSL--- 114
Query: 122 EISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHK 181
+S V+ + S ++ S + + S L
Sbjct: 115 -VSPSPRVETKNARPAPQSHPASKSASPSASQSYLAGKSTTASSAAPSSSANGSASGLES 173
Query: 182 LSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWG 241
+ D R+ RE + DA K E +E V + D V+V +A+E+ +F K G
Sbjct: 174 KIGHLPKSGDPNRDRFRELLLDAFKKCCSELTDEHSKIVKSTDFVKVTLAVETVLFSKLG 233
Query: 242 RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+G K KYR++L NLKD NPDFRR+VL G++K E +V MTA +MASD
Sbjct: 234 LFNGKEKAKYRSILFNLKDQNNPDFRRRVLMGEIKSEEIVNMTADDMASD 283
>gi|413932649|gb|AFW67200.1| hypothetical protein ZEAMMB73_561219 [Zea mays]
Length = 246
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 92/173 (53%), Gaps = 24/173 (13%)
Query: 129 VKVQKVDQNSTSSSS---NVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSS 185
VKV+K N + + S V E++ T ++ +V G H +S
Sbjct: 18 VKVEKTTSNGSKAQSVKVERVSKEVIRTPDSKRPASVPNG--------------HPKLTS 63
Query: 186 KIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVN-------ACDSVRVAIALESAMFE 238
++CND R+ +RE + +A VS E ++ RDEV ACD RVA+ +ESA+FE
Sbjct: 64 LVKCNDPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFE 123
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+ G S G ++ KYR+++ NL+ N DFRR+VL G V PE + + EMASD
Sbjct: 124 RLGPSTGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMASD 176
>gi|255567144|ref|XP_002524553.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536106|gb|EEF37761.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 152
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Query: 213 DEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLF 272
+E D + CD +++A +LESA+F KWG S+ + KYR++L N+KDPKNPDFRRK+L
Sbjct: 4 NEAKHDTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKILV 63
Query: 273 GQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWK 309
G++K E V M A +MASDEM R +++ + LWK
Sbjct: 64 GEIKAEEVAEMDAGQMASDEMQR--KNQGIQAKSLWK 98
>gi|15227992|ref|NP_181801.1| F-box protein [Arabidopsis thaliana]
gi|4512680|gb|AAD21734.1| hypothetical protein [Arabidopsis thaliana]
gi|330255067|gb|AEC10161.1| F-box protein [Arabidopsis thaliana]
Length = 737
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 2/131 (1%)
Query: 188 RCNDCFREVVREKVCDALSKVSGE-ADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGP 246
+ D R+ VRE + +L KV+ E D E++ V ACD VA+++ESAMFEK G GP
Sbjct: 601 KTGDSKRDKVREILQTSLVKVASEIVDTEMKTRVTACDPSVVAVSVESAMFEKLGCFMGP 660
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
+K KYR++L N+ D NPD RRKVL G++ E +V M +EM S+++ + Q +E AR
Sbjct: 661 HKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKEVQ-RIKENAR 719
Query: 307 LWKEHTRKYMQ 317
+E K +Q
Sbjct: 720 FKEESRMKILQ 730
>gi|302757165|ref|XP_002962006.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
gi|302775328|ref|XP_002971081.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300161063|gb|EFJ27679.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300170665|gb|EFJ37266.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
Length = 303
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 4/132 (3%)
Query: 165 GNSITEEGEASGIILHKLSSSKIR----CNDCFREVVREKVCDALSKVSGEADEEIRDEV 220
N+ E+G+ S + SSSK R ND R+ +RE + +A KV EA+ +
Sbjct: 103 ANASVEKGKVSSKQSNGNSSSKARPLPKSNDATRDKMREVLLEAFQKVPQEAEGQELARA 162
Query: 221 NACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETV 280
NA D V+VA+ +E+A+F K + K KYR+++ NLKDP NPD RR++L GQ+ +
Sbjct: 163 NAKDPVQVAVEVENALFSKLESTKVDKKAKYRSIVFNLKDPNNPDLRRRLLLGQISGSQL 222
Query: 281 VGMTAKEMASDE 292
M+A++MASD+
Sbjct: 223 TTMSAEDMASDQ 234
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 4 KVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPL 63
++ +L + A+ A+ A EG E C++AL + +T LL+STQ+ + L L
Sbjct: 8 QLTELFKTAQSAAQKATAVEGAEED----RCVEALQAMRSLRVTTSLLMSTQVGKQLRKL 63
Query: 64 TEHPTKKIQDFASDLIVSWR 83
T+H KI+ A D++ W+
Sbjct: 64 TKHSRPKIRSIAVDILEDWK 83
>gi|15233998|ref|NP_193607.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|4539391|emb|CAB37457.1| putative protein [Arabidopsis thaliana]
gi|7268666|emb|CAB78874.1| putative protein [Arabidopsis thaliana]
gi|332658681|gb|AEE84081.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 266
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 188 RCNDCFREVVREKVCDALSKVSGEA-DEEIRDEVNACDSVRVAIALESAMFEKWGRSDGP 246
+ D R+ VRE + +L+KV+ E D E++ V ACD VA+++E+AMFE G GP
Sbjct: 112 KTGDSKRDKVREILQTSLAKVASEVVDTEMKTRVTACDPWVVAVSVETAMFENLGCFMGP 171
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMAS 290
K KYR++L N+ D NPD RRKVL G++ E +V M +EM S
Sbjct: 172 QKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEKEEMGS 215
>gi|444729710|gb|ELW70117.1| Transcription elongation factor A protein 2 [Tupaia chinensis]
Length = 298
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 10/121 (8%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAV 254
+ +R K C+ L+ + + D + C+S+ I E ++F G +DG YK + R+
Sbjct: 135 DAIRSKCCEMLT-AALQKDLDYVALGADCESLSAQI--EESIFRDIGNTDGKYKNRVRSR 191
Query: 255 LGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRK 314
+ NL+D KNPD RRKVL G + P+ + MTA+EMASDEM E R + +E RK
Sbjct: 192 IFNLRDAKNPDLRRKVLRGVITPQQIAVMTAEEMASDEM-------KEIRKAMTREAIRK 244
Query: 315 Y 315
+
Sbjct: 245 H 245
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 130/291 (44%), Gaps = 53/291 (18%)
Query: 26 AEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRD 84
A+K + +D L +L +T LL ST++ + + + T +++ A LI SW+
Sbjct: 20 AQKKNGSGALDLLKELRSVPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKK 79
Query: 85 MFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSN 144
+ E PG E +TSEE ++ I+ S+S S
Sbjct: 80 LLDE------------PGSGE---------KTSEEKRKEQSTPII--------SSSQESP 110
Query: 145 VVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDA 204
R EE+ S+ N N + ++ S + ++S +D R RE + +A
Sbjct: 111 DAR------EESCSSSNTNSRSEPLDDTPGSFVNAFPRAAST---SDPIRVKCREMLANA 161
Query: 205 LSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNP 264
L D+ I + CD + I E +F+++ +D YK + R+ + NLKD KNP
Sbjct: 162 LQT----GDDYIAIGAD-CDELGAQI--EDFIFQEFKNTDMKYKNRVRSRISNLKDVKNP 214
Query: 265 DFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
+ RR VL G + PE + MTA+EMASDE+ E R L KE R +
Sbjct: 215 NLRRTVLCGSITPERMAKMTAEEMASDEL-------KEIRKNLTKEAVRDH 258
>gi|303290875|ref|XP_003064724.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453750|gb|EEH51058.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 325
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
D R+ RE + +A+++ G D E D + AIA+E+AM +W + YK
Sbjct: 158 GDPLRDRTRELLAEAIAQAIGAPDVYASVE----DVAQTAIAIENAMHAQWSDTGKEYKA 213
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
K+R + NLKDPKNPD RR V G + P ++ ++ +E+ SDE
Sbjct: 214 KFRQLSFNLKDPKNPDLRRSVADGLISPAVLLDLSPEELGSDE 256
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R RE + +AL K +G D A D +A +ES F+++ +D Y+ +
Sbjct: 125 DAVRLKCREMLSNAL-KGNGLPDG------CAADPDELAERIESTCFDEFNNTDTKYRSR 177
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R+ + NLKDPKNP+ R VL G +KPE + MTA+EMASDE+
Sbjct: 178 IRSRVANLKDPKNPNLRLGVLIGSIKPERLAKMTAEEMASDEL 220
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +A++ +D CD ++A +E+ ++++ +D Y+ + R+ +
Sbjct: 186 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIETHIYQELKSTDMKYRNRVRSRIS 242
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + PE + MTA+EMASDE+
Sbjct: 243 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 279
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D VR++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + M
Sbjct: 135 DCVRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 194
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 195 TSEEMASDEL 204
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +A+++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 187 VRDKCVEMLS-AALKAEDDFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + PE + MTA+EMASDE+
Sbjct: 244 NLKDPRNPGLRRNVLSGTISPELIAKMTAEEMASDEL 280
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +A++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 186 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 242
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + PE + MTA+EMASDE+
Sbjct: 243 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 279
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +A++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 186 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 242
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + PE + MTA+EMASDE+
Sbjct: 243 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 279
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +A++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 186 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 242
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + PE + MTA+EMASDE+
Sbjct: 243 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 279
>gi|28972117|dbj|BAC65512.1| mKIAA0244 protein [Mus musculus]
Length = 1184
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 22/182 (12%)
Query: 112 VDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEE 171
+ +R+SEE E K+ K S+ V RS E +ET ++
Sbjct: 2 LPRRSSEEKSE-------KIAKESTALASTGERVARSGTHEKQETKK-----------KK 43
Query: 172 GEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 231
E G +H +++ D R+ VR + D L K +++ +I +E A +VA
Sbjct: 44 MEKGGPNVHPPAATSKPSADQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATK 99
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS
Sbjct: 100 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASK 159
Query: 292 EM 293
E+
Sbjct: 160 EL 161
>gi|91834|pir||PS0180 transcription elongation factor S-II-related protein L122, hepatic
- mouse (fragment)
Length = 289
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +A++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 128 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 184
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + PE + MTA+EMASDE+
Sbjct: 185 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 221
>gi|405944776|pdb|2LW4|A Chain A, Solution Nmr Structure Of Human Transcription Elongation
Factor A Protein 2, Central Domain, Northeast Structural
Genomics Consortium (Nesg) Target Hr8682b
Length = 113
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + M
Sbjct: 36 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 95
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 96 TSEEMASDEL 105
>gi|388501372|gb|AFK38752.1| unknown [Medicago truncatula]
Length = 204
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 5 VMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLT 64
+++L E AK+ A+A+ + + C+DAL+QL + +LV+TQ+ ++L LT
Sbjct: 9 LVELYEAAKKAADASTSTDNSP--SEETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLT 66
Query: 65 EHPTKKIQDFASDLIVSWRDMFLEQIRDEKKG---SCTIPGDTEPAKIEKVDKRTSEECQ 121
+HP + I+ FA DLI W+D+ +++ K G S + E AK K+ K S + +
Sbjct: 67 KHPRENIRAFAVDLIAIWKDVIIKETSKNKNGASDSKVESTNGERAKAGKLQKSPSVKVE 126
Query: 122 EISGVGIVKVQKVDQNSTS--SSSNVVRSEI-VETEETNSADNV 162
+ KV+KV+ N +S SS NV + V+ E+T+ N+
Sbjct: 127 KGES---AKVEKVNGNGSSKLSSGNVKAQNVDVKIEKTDRTSNI 167
>gi|3133178|dbj|BAA28177.1| unnamed protein product [Mus musculus]
Length = 292
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 61/97 (62%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +A++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 131 VRDKCVEMLS-AALKAEDNFKDYGVNCD--KLASEIEDHIYQELKSTDMKYRNRVRSRIS 187
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + PE + MTA+EMASDE+
Sbjct: 188 NLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDEL 224
>gi|26337609|dbj|BAC32490.1| unnamed protein product [Mus musculus]
Length = 371
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Query: 130 KVQKVDQNST---SSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSK 186
K +K+ + ST S+ V RS E +ET ++ E G +H +++
Sbjct: 142 KSEKIAKESTALASTGERVARSGTHEKQETKK-----------KKMEKGGPNVHPPAATS 190
Query: 187 IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGP 246
D R+ VR + D L K +++ +I +E A +VA +E +F + +D
Sbjct: 191 KPSADQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATKIEKELFSFFRDTDAK 246
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 247 YKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 293
>gi|157817961|ref|NP_001102261.1| PHD finger protein 3 [Rattus norvegicus]
gi|149046439|gb|EDL99332.1| PHD finger protein 3 (predicted) [Rattus norvegicus]
Length = 2020
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 173 EASGIILHKLSSSKIRCN-DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 231
E G +H +++ I+ + D R+ VR + D L K +++ +I +E S +VA
Sbjct: 889 EKGGPNVHPPAAAAIKPSADQIRQSVRHSLKDILMKRLTDSNLKIPEE----KSAKVATK 944
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS
Sbjct: 945 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASK 1004
Query: 292 EM 293
E+
Sbjct: 1005 EL 1006
>gi|148682474|gb|EDL14421.1| mCG4035 [Mus musculus]
Length = 2020
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 22/182 (12%)
Query: 112 VDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEE 171
+ +R+SEE E K+ K S+ V RS E +ET ++
Sbjct: 843 LPRRSSEEKSE-------KIAKESTALASTGERVARSGTHEKQETKK-----------KK 884
Query: 172 GEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 231
E G +H +++ D R+ VR + D L K +++ +I +E A +VA
Sbjct: 885 MEKGGPNVHPPAATSKPSADQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATK 940
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS
Sbjct: 941 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASK 1000
Query: 292 EM 293
E+
Sbjct: 1001 EL 1002
>gi|124487309|ref|NP_001074549.1| PHD finger protein 3 [Mus musculus]
gi|187953739|gb|AAI37914.1| PHD finger protein 3 [Mus musculus]
Length = 2025
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 22/182 (12%)
Query: 112 VDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEE 171
+ +R+SEE E K+ K S+ V RS E +ET ++
Sbjct: 843 LPRRSSEEKSE-------KIAKESTALASTGERVARSGTHEKQETKK-----------KK 884
Query: 172 GEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 231
E G +H +++ D R+ VR + D L K +++ +I +E A +VA
Sbjct: 885 MEKGGPNVHPPAATSKPSADQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATK 940
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS
Sbjct: 941 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASK 1000
Query: 292 EM 293
E+
Sbjct: 1001 EL 1002
>gi|332862535|ref|XP_003317935.1| PREDICTED: PHD finger protein 3 isoform 1 [Pan troglodytes]
gi|410216400|gb|JAA05419.1| PHD finger protein 3 [Pan troglodytes]
gi|410258332|gb|JAA17133.1| PHD finger protein 3 [Pan troglodytes]
gi|410301720|gb|JAA29460.1| PHD finger protein 3 [Pan troglodytes]
gi|410354663|gb|JAA43935.1| PHD finger protein 3 [Pan troglodytes]
Length = 2039
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 176 GII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 234
G++ +H +S+ D R+ VR + D L K +++ +I +E A +VA +E
Sbjct: 909 GVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATKIEK 964
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 965 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1023
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 44/295 (14%)
Query: 18 AAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFAS 76
A MAEGE+ +D L +LN ++ LL +T++ + + +H + K++ A
Sbjct: 20 GAHMAEGESL-LQQEGALDLLKKLNSCQMSIQLLQTTRIGVAVNRVRKHCSDKEVVSLAK 78
Query: 77 DLIVSWRDMF------------LEQIRDEKKG-SCTIPGDTEP-AKIEKVDKRTSEECQE 122
LI +W+ + ++ + ++KG C+ D +P A + K+
Sbjct: 79 VLIKNWKRLLDSPRTTKGEREERDKAKKKEKGLGCS---DWKPEAGLSPSRKK------- 128
Query: 123 ISGVGIVKVQK--VDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILH 180
G G K ++ VD S+++SS + E +NS VG+ + S
Sbjct: 129 --GGGEPKARRDSVDSRSSTTSS----PKRPPMERSNS-----VGSKVETPKTPSSPSTP 177
Query: 181 KLSSSKIRCNDCF--REVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
+ S C+ + VR+K + LS + +A+++ +D CD ++A +E +++
Sbjct: 178 TFAPSVCLLAPCYLTGDSVRDKCVEMLS-AALKAEDDFKDYGVNCD--KLASEIEDHIYQ 234
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D Y+ + R+ + NLKDP+NP RR VL G + P + MTA+EMASDE+
Sbjct: 235 ELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDEL 289
>gi|332862537|ref|XP_003317936.1| PREDICTED: PHD finger protein 3 isoform 2 [Pan troglodytes]
Length = 1951
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 176 GII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 234
G++ +H +S+ D R+ VR + D L K +++ +I +E A +VA +E
Sbjct: 821 GVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATKIEK 876
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 877 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 935
>gi|397521935|ref|XP_003831038.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pan
paniscus]
Length = 2054
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 176 GII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 234
G++ +H +S+ D R+ VR + D L K +++ +I +E A +VA +E
Sbjct: 924 GVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKIPEEKAA----KVATKIEK 979
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 980 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1038
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + M
Sbjct: 162 DCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 221
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 222 TSEEMASDEL 231
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + M
Sbjct: 162 DCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 221
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 222 TSEEMASDEL 231
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E +++++ +D YK + R+ + NLKD KNPD RR VL G + PE + M
Sbjct: 163 DCEHMAAQIEDYIYQEFKSTDMKYKTRLRSRISNLKDQKNPDLRRNVLCGNISPERIASM 222
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
TA+EMAS E+ E R L KE R++
Sbjct: 223 TAEEMASPEL-------KEIRKALTKESIREH 247
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + M
Sbjct: 135 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 194
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 195 TSEEMASDEL 204
>gi|194391306|dbj|BAG60771.1| unnamed protein product [Homo sapiens]
Length = 861
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 176 GII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 234
G++ +H +S+ D R+ VR + D L K +++ ++ +E A +VA +E
Sbjct: 178 GVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEK 233
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 234 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 292
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + M
Sbjct: 162 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 221
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 222 TSEEMASDEL 231
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + M
Sbjct: 162 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 221
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 222 TSEEMASDEL 231
>gi|20521870|dbj|BAA13438.2| KIAA0244 [Homo sapiens]
Length = 2044
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 176 GII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 234
G++ +H +S+ D R+ VR + D L K +++ ++ +E A +VA +E
Sbjct: 914 GVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEK 969
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 970 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1028
>gi|348544613|ref|XP_003459775.1| PREDICTED: transcription elongation factor A protein 2-like
[Oreochromis niloticus]
Length = 308
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
DC R RE + AL + + + IR D +A +E +F+++ +D YK +
Sbjct: 140 DCVRSKCRELLVVALQ--TDDDHKAIR-----VDCEHLAAQIEEQIFQEFKSTDMKYKTR 192
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R+ + NLKD KNP+ RR VL G + P + MTA+EMAS E+
Sbjct: 193 LRSRISNLKDQKNPELRRNVLCGNISPHRIACMTAEEMASAEL 235
>gi|7662018|ref|NP_055968.1| PHD finger protein 3 [Homo sapiens]
gi|34098662|sp|Q92576.3|PHF3_HUMAN RecName: Full=PHD finger protein 3
gi|6648928|gb|AAF21292.1|AF091622_1 PHD finger protein 3 [Homo sapiens]
gi|109731109|gb|AAI13651.1| PHD finger protein 3 [Homo sapiens]
gi|109731774|gb|AAI13653.1| PHD finger protein 3 [Homo sapiens]
gi|119608902|gb|EAW88496.1| PHD finger protein 3 [Homo sapiens]
gi|126540985|emb|CAM45842.1| PHD finger protein 3 [Homo sapiens]
gi|168278551|dbj|BAG11155.1| PHD finger protein 3 [synthetic construct]
Length = 2039
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 176 GII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 234
G++ +H +S+ D R+ VR + D L K +++ ++ +E A +VA +E
Sbjct: 909 GVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEK 964
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 965 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1023
>gi|395737392|ref|XP_002817084.2| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pongo
abelii]
Length = 2061
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 176 GII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 234
G++ +H +S+ D R+ VR + D L K +++ ++ +E A +VA +E
Sbjct: 924 GVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEK 979
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 980 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1038
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + M
Sbjct: 162 DCKRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 221
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 222 TSEEMASDEL 231
>gi|60219226|emb|CAI56715.1| hypothetical protein [Homo sapiens]
Length = 1951
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 176 GII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 234
G++ +H +S+ D R+ VR + D L K +++ ++ +E A +VA +E
Sbjct: 821 GVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEK 876
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 877 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 935
>gi|426353656|ref|XP_004044303.1| PREDICTED: PHD finger protein 3-like [Gorilla gorilla gorilla]
Length = 1309
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 176 GII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES 234
G++ +H +S+ D R+ VR + D L K +++ ++ +E A +VA +E
Sbjct: 178 GVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEK 233
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 234 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 292
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 223 CDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
CD + I E +F+++ +D YK + R+ + NLKD KNP+ RR VL G V PE +
Sbjct: 175 CDELGAQI--EECIFQEFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAK 232
Query: 283 MTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
MTA+EMASDE+ E R L KE R +
Sbjct: 233 MTAEEMASDEL-------KEMRKNLTKEAVRDH 258
>gi|348588983|ref|XP_003480244.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Cavia
porcellus]
Length = 2019
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K E++ ++ +E A +VA +E +F + +D YK K
Sbjct: 907 DQIRQSVRHSLKDILMKRLTESNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 962
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+++E+AS E+
Sbjct: 963 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSSEELASKEL 1005
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD +NPD RR VL G + P+ + M
Sbjct: 138 DCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDARNPDLRRNVLCGAITPQQIAVM 197
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 198 TSEEMASDEL 207
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD +NPD RR VL G + P+ + M
Sbjct: 162 DCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDARNPDLRRNVLCGAITPQQIAVM 221
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 222 TSEEMASDEL 231
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + M
Sbjct: 162 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVM 221
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 222 TSEEMASDEL 231
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + M
Sbjct: 169 DCKRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQRIAVM 228
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 229 TSEEMASDEL 238
>gi|332253853|ref|XP_003276047.1| PREDICTED: PHD finger protein 3, partial [Nomascus leucogenys]
Length = 1807
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Query: 173 EASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIAL 232
E + +H +S+ D R+ VR + D L K +++ ++ +E A +VA +
Sbjct: 673 EKGMLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKI 728
Query: 233 ESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
E +F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E
Sbjct: 729 EKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 788
Query: 293 M 293
+
Sbjct: 789 L 789
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A+F+++ +D YK + R+ + NLKD KNP+ RR VL G + P+ M+A+EMASD
Sbjct: 174 IEEAVFQEFKNTDAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASD 233
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 234 EL-------KEMRKNLTKEAIREH 250
>gi|354485811|ref|XP_003505075.1| PREDICTED: PHD finger protein 3-like [Cricetulus griseus]
Length = 2005
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Query: 173 EASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIAL 232
E G +H +++ D R+ VR + D L + +++ ++ +E A +VA +
Sbjct: 889 EKGGPHVHPPAAASKPSADQIRQSVRHSLKDILMRRLTDSNLKVPEEKAA----KVATKI 944
Query: 233 ESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
E +F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E
Sbjct: 945 EKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1004
Query: 293 M 293
+
Sbjct: 1005 L 1005
>gi|427797651|gb|JAA64277.1| Putative transcription elongation factor a sii 1, partial
[Rhipicephalus pulchellus]
Length = 292
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 7/93 (7%)
Query: 218 DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKP 277
D C++ +A +E +++ ++G ++ YK + R+ + NLKD KNP R VL G ++P
Sbjct: 149 DMPEGCNTDSLAAKIEESIYNEFGDTNNKYKNRVRSRVSNLKDSKNPALRINVLHGAIEP 208
Query: 278 ETVVGMTAKEMASDEMLRSYQHEDEERARLWKE 310
E + MTA+EMASD+M + R RL KE
Sbjct: 209 ERIARMTAEEMASDDM-------KQLRQRLTKE 234
>gi|297291110|ref|XP_001106919.2| PREDICTED: PHD finger protein 3 [Macaca mulatta]
Length = 2037
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 17/199 (8%)
Query: 108 KIEKVDKRTSEECQ--EISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETN--SADNVN 163
K E + R S +C+ EI + ++K+ Q S+ +SE + E T S N++
Sbjct: 831 KRESGEGRNSSDCRDNEIKKWQLAPLRKMGQPVLPRRSSEEKSEKIPKESTTDFSVRNIS 890
Query: 164 VGNSITEEGEA-------SGII-LHKLSSSKIRCN-DCFREVVREKVCDALSKVSGEADE 214
V T E + G++ +H ++S + + D R+ VR + D L K +++
Sbjct: 891 VWTMGTHEKQEMKKKKVEKGVLNVHPPAASASKPSADQIRQSVRHSLKDILMKRLTDSNL 950
Query: 215 EIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
++ +E A +VA +E +F + +D YK KYR+++ NLKDPKN +KVL G+
Sbjct: 951 KVPEEKAA----KVATKIEKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGE 1006
Query: 275 VKPETVVGMTAKEMASDEM 293
V P+ ++ M+ +E+AS E+
Sbjct: 1007 VTPDHLIRMSPEELASKEL 1025
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 14/126 (11%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
+D R RE + +AL +GE I D + +E +F+++ +D YK
Sbjct: 131 SDSIRLKCREMLANALQ--TGEDYIAI-----GADCEELGAQIEECIFQEFKNTDMKYKN 183
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWK 309
+ R+ + NLKD KNP+ RR VL G V PE + MTA+EMASDE+ E R L K
Sbjct: 184 RVRSRISNLKDMKNPNLRRTVLCGSVSPERMAKMTAEEMASDEL-------KEMRKNLTK 236
Query: 310 EHTRKY 315
E R +
Sbjct: 237 EAVRDH 242
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
R++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + MT++
Sbjct: 222 RLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSE 281
Query: 287 EMASDEM 293
EMASDE+
Sbjct: 282 EMASDEL 288
>gi|410959484|ref|XP_003986338.1| PREDICTED: PHD finger protein 3 [Felis catus]
Length = 2211
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K E++ ++ +E A +VA +E +F + +D YK K
Sbjct: 1099 DQIRQSVRHSLKDILMKRLTESNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 1154
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 1155 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1197
>gi|350585852|ref|XP_003482063.1| PREDICTED: SPOC domain-containing protein 1-like [Sus scrofa]
Length = 1288
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V A+ +V +E+ D V + +V +A +E+A+F+ ++G Y+ KYR++L
Sbjct: 593 VRSTVVRAMREVLWSRLQELPDLVLSEGAVEGLAAGIEAALFDLTHATNGHYRTKYRSLL 652
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+NPD KV+ G V P+ +V M + ++A E+ R ++ ++E+R
Sbjct: 653 FNLRDPRNPDLFLKVIHGDVTPQGLVRMNSVQLAPQELAR-WRDQEEKRG 701
>gi|441639245|ref|XP_003280185.2| PREDICTED: transcription elongation factor A protein 2 [Nomascus
leucogenys]
Length = 443
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVN-ACDSVRVAIALESAMFEKWGRSDGPYKI 249
D R RE + AL + RD V D R++ +E +F G +D YK
Sbjct: 280 DAVRSKCREMLAAAL--------QTDRDHVAIGADCERLSAQIEECIFRDVGNTDMKYKN 331
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ R+ + NLKD KNPD RR VL G + P+ + MT++EMASDE+
Sbjct: 332 RVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDEL 375
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F G +D YK + R+ L NLKD KNP RRKVL G + P+ + MT++E
Sbjct: 167 LAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEE 226
Query: 288 MASDEM 293
MASDE+
Sbjct: 227 MASDEL 232
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D R++ +E +F G +D YK + R+ + NLKD KNP+ RR VL G + P+ + M
Sbjct: 163 DCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPELRRNVLCGTITPQQIAVM 222
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 223 TSEEMASDEL 232
>gi|73973196|ref|XP_538985.2| PREDICTED: PHD finger protein 3 isoform 1 [Canis lupus familiaris]
Length = 2043
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L + E++ ++ +E A +VA +E +F + +D YK K
Sbjct: 927 DQIRQSVRHSLKDILMRRLTESNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 982
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 983 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1025
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 223 CDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
CD + I E +F ++ +D YK + R+ + NLKD KNP+ RR VL G V P+ +
Sbjct: 173 CDELGAQI--EECIFLEFKNTDMKYKNRVRSRISNLKDAKNPNLRRNVLCGNVSPDRIAK 230
Query: 283 MTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
MTA+EMASDE+ E R L KE R +
Sbjct: 231 MTAEEMASDEL-------KEMRKNLTKEAIRDH 256
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
++A +E +F++ +D Y+ + R+ + NLKDPKNP RR VL G ++P + MTA+
Sbjct: 245 KMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPALRRNVLCGAIEPSLIARMTAE 304
Query: 287 EMASDEM 293
EMASDE+
Sbjct: 305 EMASDEL 311
>gi|380807497|gb|AFE75624.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 155
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 28 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 84
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 85 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 121
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F G +D YK + R+ L NLKD KNP RRKVL G + P+ + MT++E
Sbjct: 167 LAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEE 226
Query: 288 MASDEM 293
MASDE+
Sbjct: 227 MASDEL 232
>gi|351711851|gb|EHB14770.1| PHD finger protein 3 [Heterocephalus glaber]
Length = 2028
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 108 KIEKVDKRTSEECQ--EISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVG 165
K E + R S +C+ EI + +++ Q + S+ +SE + E TN
Sbjct: 821 KRESPEGRNSSDCRDNEIKKWQLAPLRRTGQPALPRRSSEEKSEKIPKEATNIICTAPKP 880
Query: 166 NSITEEGEA---------SGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEI 216
S E+ E G+ +SK D R+ VR + D L K +++ ++
Sbjct: 881 GSTHEKQEPKKKKAEKGTPGVHPAAAPTSKPSA-DQIRQSVRHSLKDILMKRLTDSNLKV 939
Query: 217 RDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVK 276
+E A +VA +E +F + +D YK KYR+++ NLKDPKN +KVL G+V
Sbjct: 940 PEEKAA----KVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVT 995
Query: 277 PETVVGMTAKEMASDEM 293
P+ ++ M+ +E+AS E+
Sbjct: 996 PDHLIKMSPEELASKEL 1012
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A+F+++ ++ YK + R+ + NLKD KNP+ RR VL G + P+ MTA+EMASD
Sbjct: 174 IEDAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDFFARMTAEEMASD 233
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 234 EL-------KEMRKNLTKEAIREH 250
>gi|344264752|ref|XP_003404454.1| PREDICTED: PHD finger protein 3 [Loxodonta africana]
Length = 2047
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 172 GEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 231
G S + S+SK D R+ VR + D L K +++ ++ +E A +VA
Sbjct: 910 GGVSNVHPPAASTSKPSA-DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATK 964
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS
Sbjct: 965 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNSILFKKVLKGEVTPDHLIRMSPEELASK 1024
Query: 292 EM 293
E+
Sbjct: 1025 EL 1026
>gi|449497988|ref|XP_004176896.1| PREDICTED: PHD finger protein 3 isoform 2 [Taeniopygia guttata]
Length = 2069
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
Query: 130 KVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRC 189
K +K+ + S S+ +S + E +E N E+G S L + +SK
Sbjct: 888 KNEKISKESLSTVERSTKSGVHEKQEIKKKKN--------EKGSISATHLPAVPASKPSA 939
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
D R+ V++ + + L K ++ +I +E A +VA +E +F + +D YK
Sbjct: 940 -DQIRQSVKQSLKEILMKRLTDSSLKIPEERAA----KVATRIERELFSFFRDTDAKYKN 994
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWK 309
KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+ Q E+ + +
Sbjct: 995 KYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENRHTIEMIE 1054
Query: 310 EHTRKYMQR 318
+ R+ +R
Sbjct: 1055 KEQREVERR 1063
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 187 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 244 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 280
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 188 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 244
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 245 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 281
>gi|449497986|ref|XP_002192240.2| PREDICTED: PHD finger protein 3 isoform 1 [Taeniopygia guttata]
Length = 2086
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
Query: 130 KVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRC 189
K +K+ + S S+ +S + E +E N E+G S L + +SK
Sbjct: 905 KNEKISKESLSTVERSTKSGVHEKQEIKKKKN--------EKGSISATHLPAVPASKPSA 956
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
D R+ V++ + + L K ++ +I +E A +VA +E +F + +D YK
Sbjct: 957 -DQIRQSVKQSLKEILMKRLTDSSLKIPEERAA----KVATRIERELFSFFRDTDAKYKN 1011
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWK 309
KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+ Q E+ + +
Sbjct: 1012 KYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENRHTIEMIE 1071
Query: 310 EHTRKYMQR 318
+ R+ +R
Sbjct: 1072 KEQREVERR 1080
>gi|281350870|gb|EFB26454.1| hypothetical protein PANDA_015611 [Ailuropoda melanoleuca]
Length = 2043
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 928 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 983
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 984 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1026
>gi|301620068|ref|XP_002939405.1| PREDICTED: transcription elongation factor A protein 3-like
[Xenopus (Silurana) tropicalis]
Length = 453
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K D ++ + + D++ + C+ R+A +E ++ +D Y+ + R+ +
Sbjct: 292 VRDKCVDMVAS-ALKTDDDYKQFGTNCE--RLAWEIEECIYRDIKATDMKYRNRIRSRIS 348
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDPKNP+ R+ VL G V P+ + MTA+EMASDE+
Sbjct: 349 NLKDPKNPNLRKNVLCGVVTPQNIATMTAEEMASDEL 385
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 187 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 244 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 280
>gi|301781204|ref|XP_002926018.1| PREDICTED: PHD finger protein 3-like [Ailuropoda melanoleuca]
Length = 2074
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 959 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 1014
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 1015 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1057
>gi|118088827|ref|XP_426199.2| PREDICTED: PHD finger protein 3 [Gallus gallus]
Length = 2065
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 112 VDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEE 171
+ +R+SEE K +K+ + S S +S + E +E N E+
Sbjct: 873 IPRRSSEE----------KGEKISKESLSVVEKSTKSGVHEKQEIKKKKN--------EK 914
Query: 172 GEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 231
G S L + +SK D R V++ + + L K ++ +I +E A +VA
Sbjct: 915 GPTSATHLPNVPASKPSA-DQIRHSVKQSLKEILMKRLTDSSLKIPEERAA----KVATR 969
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS
Sbjct: 970 IERELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASK 1029
Query: 292 EMLRSYQHEDEERARLWKEHTRKYMQR 318
E+ Q E+ + ++ R+ +R
Sbjct: 1030 ELAAWRQRENRHTIEMIEKEQREVERR 1056
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 187 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 244 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 280
>gi|431838241|gb|ELK00173.1| PHD finger protein 3 [Pteropus alecto]
Length = 2121
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 991 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 1046
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 1047 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1089
>gi|54304003|emb|CAH59746.1| transcription elongation factor A protein 2 (SII) [Homo sapiens]
Length = 86
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + MT++EMASD
Sbjct: 3 IEECIFRGVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASD 62
Query: 292 EM 293
E+
Sbjct: 63 EL 64
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A+F++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 175 IEEAIFQELKNTDMKYKNRVRSRIANLKDTKNPNLRKNVLCGNIAPDRFAKMTAEEMASD 234
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 235 EL-------KEMRKNLTKEAIREH 251
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 187 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 244 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 280
>gi|147904545|ref|NP_001090166.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|10801727|dbj|BAB16755.1| transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ E V AL + D++ + C+ R+A +E ++ + +D Y+ +
Sbjct: 482 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 534
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R+ + NLKDPKNP+ R+ VL G V P+++ MTA+EMASDE+
Sbjct: 535 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDEL 577
>gi|417406878|gb|JAA50079.1| Putative transcription factor datf1 [Desmodus rotundus]
Length = 2045
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 930 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 985
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 986 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1028
>gi|213623950|gb|AAI70441.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ E V AL + D++ + C+ R+A +E ++ + +D Y+ +
Sbjct: 482 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 534
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R+ + NLKDPKNP+ R+ VL G V P+++ MTA+EMASDE+
Sbjct: 535 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDEL 577
>gi|440804552|gb|ELR25429.1| transcription elongation factor SII, hS-II-T1 isoform 8, putative
[Acanthamoeba castellanii str. Neff]
Length = 188
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 11/109 (10%)
Query: 185 SKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSD 244
+ I+ ND R+ E + +AL + +AD +A+ +E+ MF+ +G ++
Sbjct: 24 APIKLNDATRQKCFEMLAEALEQSESDAD-----------YFELALDIEAEMFKLFGETN 72
Query: 245 GPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YK K+R + NLK+ KN D R VL G + PE + MT++E+AS E+
Sbjct: 73 PNYKAKFRQLFMNLKNVKNHDLRLGVLNGHISPERLCQMTSQELASKEL 121
>gi|213625366|gb|AAI70443.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ E V AL + D++ + C+ R+A +E ++ + +D Y+ +
Sbjct: 482 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 534
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R+ + NLKDPKNP+ R+ VL G V P+++ MTA+EMASDE+
Sbjct: 535 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDEL 577
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 159 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 215
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 216 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 252
>gi|355711246|gb|AES03948.1| PHD finger protein 3 [Mustela putorius furo]
Length = 1987
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 873 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 928
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 929 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 971
>gi|355762974|gb|EHH62098.1| hypothetical protein EGM_20299 [Macaca fascicularis]
Length = 2040
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1024
>gi|225716628|gb|ACO14160.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 181
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR K + LS+ D+ I + CD + I E ++F ++ +D YK + R+ +
Sbjct: 20 VRMKCREMLSQALQAGDDYIAIGAD-CDELGAQI--EESIFSEFQNTDPKYKNRVRSRIA 76
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKD KNP+ RR VL G V P+ + MTA+EMASDE+
Sbjct: 77 NLKDIKNPNLRRNVLCGNVAPDRMAKMTAEEMASDEL 113
>gi|449497990|ref|XP_004176897.1| PREDICTED: PHD finger protein 3 isoform 3 [Taeniopygia guttata]
gi|449497992|ref|XP_004176898.1| PREDICTED: PHD finger protein 3 isoform 4 [Taeniopygia guttata]
Length = 1981
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 13/189 (6%)
Query: 130 KVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRC 189
K +K+ + S S+ +S + E +E N E+G S L + +SK
Sbjct: 800 KNEKISKESLSTVERSTKSGVHEKQEIKKKKN--------EKGSISATHLPAVPASKPSA 851
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
D R+ V++ + + L K ++ +I +E A +VA +E +F + +D YK
Sbjct: 852 -DQIRQSVKQSLKEILMKRLTDSSLKIPEERAA----KVATRIERELFSFFRDTDAKYKN 906
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWK 309
KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+ Q E+ + +
Sbjct: 907 KYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENRHTIEMIE 966
Query: 310 EHTRKYMQR 318
+ R+ +R
Sbjct: 967 KEQREVERR 975
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 126/267 (47%), Gaps = 20/267 (7%)
Query: 35 IDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDMFLEQIRDE 93
+D L +LN ++ LL +T++ + + +H + K++ A LI +W+ +
Sbjct: 27 LDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL------- 79
Query: 94 KKGSCTIPGDTEPAKIEKVDKR-TSEECQEI---SGVGIVKVQKVDQNSTSSSSNVVRSE 149
S +P + + EK K +C + +G+ + ++ ++ S +S
Sbjct: 80 --DSPGLPKGEKGEEREKAKKNEKGHDCSDWKPETGLSPPRKKRGEEPKDRRDSTDSKSS 137
Query: 150 IVETEETNSADNVNVGNSITEEGEA-SGIILHKLSSSKIRCNDCF--REVVREKVCDALS 206
+ + S + N S E + S + + S C+ + VR+K + LS
Sbjct: 138 ATSSPKRPSMERSNSSKSKAEAPKTPSSPLTPTFAPSMCLLAPCYLTGDSVRDKCVEMLS 197
Query: 207 KVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDF 266
+ +AD++ +D CD ++A +E ++++ +D Y+ + R+ + NLKDP+NP
Sbjct: 198 -AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGL 254
Query: 267 RRKVLFGQVKPETVVGMTAKEMASDEM 293
RR VL G + + MTA+EMASDE+
Sbjct: 255 RRNVLSGAISAGLIAKMTAEEMASDEL 281
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D + +E A+F+++ +D YK + R+ + NLKD KNP+ RR VL G + P M
Sbjct: 169 DDEELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDGKNPNLRRNVLCGNISPIVFAKM 228
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
+A+EMASDE+ E R L KE R++
Sbjct: 229 SAEEMASDEL-------KEMRKNLTKEAIREH 253
>gi|432112838|gb|ELK35434.1| PHD finger protein 3 [Myotis davidii]
Length = 2033
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 925 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 980
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 981 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1023
>gi|403268692|ref|XP_003926403.1| PREDICTED: PHD finger protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 2039
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 180 HKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEK 239
H +S+ D R+ VR + D L K +++ ++ +E A +VA +E ++
Sbjct: 913 HPPASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSF 968
Query: 240 WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 969 FRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1022
>gi|383417063|gb|AFH31745.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1024
>gi|334324097|ref|XP_001372425.2| PREDICTED: PHD finger protein 3 [Monodelphis domestica]
Length = 2036
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 176 GIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESA 235
+ H +SK D R+ V+ + D L K +++ +I +E A +VA +E
Sbjct: 910 NVHTHPAPTSKPSA-DQIRQSVKHSLKDILMKRLTDSNLKIPEERAA----KVATKIEKE 964
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 965 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1022
>gi|355561823|gb|EHH18455.1| hypothetical protein EGK_15055 [Macaca mulatta]
Length = 2040
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1024
>gi|380811170|gb|AFE77460.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 926 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 981
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 982 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1024
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 187 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 244 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 280
>gi|403268694|ref|XP_003926404.1| PREDICTED: PHD finger protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1951
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 180 HKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEK 239
H +S+ D R+ VR + D L K +++ ++ +E A +VA +E ++
Sbjct: 825 HPPASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSF 880
Query: 240 WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 881 FRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 934
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A+F++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 175 IEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASD 234
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 235 EL-------KEMRKNLTKEAIREH 251
>gi|456753196|gb|JAA74119.1| PHD finger protein 3 [Sus scrofa]
Length = 2032
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 918 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 973
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 974 YRSLMFNLKDPKNNILFKKVLRGEVTPDHLIRMSPEELASKEL 1016
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A+F+++ ++ YK + R+ + NLKD KNP+ RR VL G + P+ M+A+EMASD
Sbjct: 175 IEEAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASD 234
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 235 EL-------KEMRKNLTKEAIREH 251
>gi|296198509|ref|XP_002746743.1| PREDICTED: PHD finger protein 3 isoform 2 [Callithrix jacchus]
Length = 1951
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 180 HKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEK 239
H +S+ D R+ VR + D L K +++ ++ +E A +VA +E ++
Sbjct: 825 HPPASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSF 880
Query: 240 WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 881 FRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 934
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A+F++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 175 IEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASD 234
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 235 EL-------KEMRKNLTKEAIREH 251
>gi|327280228|ref|XP_003224854.1| PREDICTED: PHD finger protein 3-like [Anolis carolinensis]
Length = 2037
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 4/125 (3%)
Query: 169 TEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRV 228
TE+G + +SS+ D R+ VR+ + + L K ++ +I +E A +V
Sbjct: 903 TEKGRTASNTHTPVSSATKPSVDQIRQSVRQSLKEILEKRLTDSTLKIPEERAA----KV 958
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
A +E +F + +D YK KYR+++ NLKDPKN ++VL G+V P+ ++ M+ +E+
Sbjct: 959 ATKIEKELFSFFRDTDSKYKNKYRSLIFNLKDPKNKILFKRVLKGEVTPDHLIRMSPEEL 1018
Query: 289 ASDEM 293
AS E+
Sbjct: 1019 ASKEL 1023
>gi|296198507|ref|XP_002746742.1| PREDICTED: PHD finger protein 3 isoform 1 [Callithrix jacchus]
Length = 2039
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 180 HKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEK 239
H +S+ D R+ VR + D L K +++ ++ +E A +VA +E ++
Sbjct: 913 HPPASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELYSF 968
Query: 240 WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 969 FRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1022
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 223 CDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
CD + I E +F+++ +D YK + R+ + NLKD KNP+ RR VL G V PE +
Sbjct: 174 CDELGAQI--EEVIFQEFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAK 231
Query: 283 MTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
M+A+EMASDE+ E R L KE R +
Sbjct: 232 MSAEEMASDEL-------REMRKNLTKEAVRDH 257
>gi|159164218|pdb|2DME|A Chain A, Solution Structure Of The Tfiis Domain Ii Of Human Phd
Finger Protein 3
Length = 120
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 10 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 65
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 66 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 108
>gi|426328285|ref|XP_004024930.1| PREDICTED: transcription elongation factor A protein 3 [Gorilla
gorilla gorilla]
Length = 327
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 166 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 222
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 223 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 259
>gi|412991105|emb|CCO15950.1| predicted protein [Bathycoccus prasinos]
Length = 768
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 221 NACDSVRVAIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPET 279
NA + +A+ +E A+FE+ GR G Y + R+++ NL+DP+NP R +VL V ET
Sbjct: 140 NALNPSEIAVGIERALFERCGRDTGKEYGVHARSLMFNLRDPQNPTLRARVLHENVSAET 199
Query: 280 VVGMTAKEMASDEML 294
+V MT E+A+ E++
Sbjct: 200 LVKMTPAELANKELI 214
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + MT++EMASD
Sbjct: 179 IEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASD 238
Query: 292 EM 293
E+
Sbjct: 239 EL 240
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A+F++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 175 IEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASD 234
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 235 EL-------KEMRKNLTKEAIREH 251
>gi|159474128|ref|XP_001695181.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276115|gb|EDP01889.1| predicted protein [Chlamydomonas reinhardtii]
Length = 348
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 120/292 (41%), Gaps = 46/292 (15%)
Query: 17 EAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFAS 76
E++ + +KA A +D L QL + +T LL T + L +H + + A
Sbjct: 17 ESSSQGAADGDKAEEARMLDVLKQLQRRGVTADLLKRTNAGKRLNKFCKHASDAVSKSAK 76
Query: 77 DLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQ 136
+ +W+ ++ D G G ++PAK + + + G
Sbjct: 77 AAVEAWKQCVKKETAD--GGDTAEGGASQPAKAPMANDSAAGGRE-----GQPLAGASAA 129
Query: 137 NSTSSSSNVVRSEIVETEETNSADNVNVGNS---ITEEGEASGIILHKLSSSKIRCNDCF 193
++ +S +RS G+S +T + AS S RC +
Sbjct: 130 PASGTSGGGLRS---------------AGSSQQLLTRQPSASS---SGFSVDPPRCGNET 171
Query: 194 REVVREKVCDALSKV---SGEADEEIRDEVNACDSVRVAIALESAMFEKWGRS------- 243
R+ VR + +AL+ G+ N ++ A+E A+++ G
Sbjct: 172 RDKVRSMLAEALAVGYVGGGDTGPSSLQSPN-----QLGAAIEEALYDLMGGGGGGGGGR 226
Query: 244 ---DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
YK K R++ NLKD KNPD R +VL G V PET+V ++A+EMASDE
Sbjct: 227 EAVSAEYKAKARSLCFNLKDAKNPDLRERVLSGSVPPETLVRLSAEEMASDE 278
>gi|402867376|ref|XP_003897831.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3 [Papio anubis]
Length = 2165
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 1051 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDSKYKNK 1106
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 1107 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1149
>gi|449494108|ref|XP_004175278.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Taeniopygia guttata]
Length = 267
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A+F++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 138 IEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASD 197
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 198 EL-------KEMRKNLTKEAIREH 214
>gi|296484308|tpg|DAA26423.1| TPA: PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 917 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 972
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1015
>gi|300796758|ref|NP_001179500.1| PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 917 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 972
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1015
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + MT++EMASD
Sbjct: 145 IEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASD 204
Query: 292 EM 293
E+
Sbjct: 205 EL 206
>gi|440911148|gb|ELR60861.1| PHD finger protein 3, partial [Bos grunniens mutus]
Length = 1943
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 836 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 891
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 892 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 934
>gi|326916345|ref|XP_003204468.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Meleagris
gallopavo]
Length = 2064
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 170 EEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVA 229
E+G S L + +SK D R V++ + + L K ++ +I +E A +VA
Sbjct: 913 EKGPVSAAHLPTVPASKPSA-DQIRHSVKQSLKEILMKRLTDSSLKIPEERAA----KVA 967
Query: 230 IALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
+E +F + +D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+A
Sbjct: 968 TRIERELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELA 1027
Query: 290 SDEMLRSYQHEDEERARLWKEHTRKYMQR 318
S E+ Q E+ + ++ R+ +R
Sbjct: 1028 SKELAAWRQRENRHTIEMIEKEQREVERR 1056
>gi|426235316|ref|XP_004011630.1| PREDICTED: PHD finger protein 3 isoform 1 [Ovis aries]
Length = 2027
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 917 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 972
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1015
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A+F++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 175 IEEAIFQELKNTDMKYKNRVRSRIANLKDTKNPNLRKNVLCGNILPDRFAKMTAEEMASD 234
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 235 EL-------KEMRKNLTKEAIREH 251
>gi|3347834|gb|AAC64679.1| transcription elongation factor S-II [Xenopus laevis]
Length = 289
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ E V AL + D++ + C+ R+A +E ++ + +D Y+ +
Sbjct: 126 DSVRDKCVEMVASAL-----KTDDDYKQFGTNCE--RLAWEIEECIYSEVKVTDMKYRNR 178
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R+ + NLKDPKNP+ R+ VL G V P+++ MTA+EMASDE+
Sbjct: 179 IRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDEL 221
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR K C L + + D++ + CD +A +E +F+++ +D YK + R+ +
Sbjct: 148 VRNK-CRELLVAALQTDDDYKTIGVDCD--HLAAQIEHQIFQEFKSTDMKYKARLRSRIS 204
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKD KNPD RR VL G + + + MTA+EMAS E+
Sbjct: 205 NLKDQKNPDLRRNVLCGNISAQRIACMTAEEMASAEL 241
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 227 VRDKCVEMLS-AALKADDDYKDYGINCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 283
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 284 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 320
>gi|426235318|ref|XP_004011631.1| PREDICTED: PHD finger protein 3 isoform 2 [Ovis aries]
Length = 1939
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 829 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 884
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 885 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 927
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 25/269 (9%)
Query: 35 IDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDMFLEQIRDE 93
+ L +LN ++ LL +T++ + + +H + K++ A LI +W+ +
Sbjct: 27 LGLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLL------- 79
Query: 94 KKGSCTIPGDTEPAKIEKVDKRTSEECQEIS------GVGIVKVQKVDQNSTSSSSNVVR 147
PG + K E+ DK E+ + S G+ + ++ ++ S +
Sbjct: 80 -----DSPGPPKGEKGEERDKAKKEKGLDCSNWKPETGLSPPRKKRAEEPKERRDSVDSK 134
Query: 148 SEIVETEETNSADNVNVGNSITEEGEA-SGIILHKLSSSKIRCNDCF--REVVREKVCDA 204
S + + S + N G S E + + + S C+ + VR+K +
Sbjct: 135 SSATSSPKRPSMERSNSGKSKAETPKTPTSPSTPTFAPSVCLLAPCYLTGDSVRDKCVEM 194
Query: 205 LSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNP 264
LS + +A+++ +D CD ++A +E ++++ +D Y+ + R+ + NLKDP+NP
Sbjct: 195 LS-AALKAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNP 251
Query: 265 DFRRKVLFGQVKPETVVGMTAKEMASDEM 293
RR VL G + + MTA+EMASDE+
Sbjct: 252 SLRRNVLSGAISAGLIAKMTAEEMASDEL 280
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 223 CDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
CD + I E +F+ + +D YK + R+ + NLKD KNP+ RR VL G + PE +
Sbjct: 175 CDELGAQI--EDFIFQVFKNTDMKYKNRVRSRISNLKDVKNPNLRRTVLCGSITPERMAK 232
Query: 283 MTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
MTA+EMASDE+ E R L KE R +
Sbjct: 233 MTAEEMASDEL-------KEIRKNLTKEAVRDH 258
>gi|410966896|ref|XP_003989963.1| PREDICTED: SPOC domain-containing protein 1 [Felis catus]
Length = 1178
Score = 64.7 bits (156), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V A+ +V +E+ D V + ++V +A +E+A+F+ ++ YK KYR++L
Sbjct: 570 VRGAVVHAMREVLWSRLQELPDLVLSEEAVGGIAADIEAALFDLTQATNCRYKTKYRSLL 629
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRK 314
NL+DP+NPD KVL G V P +V M++ ++A E+ R E++ + ++ +K
Sbjct: 630 FNLRDPRNPDLFLKVLQGDVTPHGLVRMSSTQLAPQELARWRDQEEKRGLEIIEQQQKK 688
>gi|432094021|gb|ELK25813.1| Transcription elongation factor A protein 2 [Myotis davidii]
Length = 131
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+ + +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + MT++EMASD
Sbjct: 1 MPARIFRDVGNTDMKYKNRVRSRIANLKDAKNPDLRRNVLCGTITPQQIAVMTSEEMASD 60
Query: 292 EM 293
E+
Sbjct: 61 EL 62
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 233 ESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
E +F G +D YK + R+ L NLKD KNP RRKVL G + P+ + MT++EMASDE
Sbjct: 158 EYILFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDE 217
Query: 293 M 293
+
Sbjct: 218 L 218
>gi|307105461|gb|EFN53710.1| hypothetical protein CHLNCDRAFT_53651 [Chlorella variabilis]
Length = 1283
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYR 252
R+ VR + AL V+ EA E + A A+E+A+F+ +G + YK K+R
Sbjct: 367 LRQKVRGGIQQALELVATEAAGEAG---RLPEPAPTAEAVEAALFKLYGGTTKDYKQKFR 423
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
+ NLKD NPD R VL G + P+ V MTA E+A+ E L +Y+ EE A
Sbjct: 424 TLQFNLKDAHNPDLRAHVLRGDIAPDAFVRMTATELANKE-LAAYRKAKEEEA 475
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 128/294 (43%), Gaps = 67/294 (22%)
Query: 27 EKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDM 85
+K A +D L +L +T LL ST++ + + + T +++ A LI SW+ +
Sbjct: 17 QKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL 76
Query: 86 F----LEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSS 141
E+ DEKK EPA + + S E +E S +S
Sbjct: 77 LDGPSTEKDLDEKK--------KEPA----ITSQNSPEAREES---------------TS 109
Query: 142 SSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKV 201
S NV + +ETN+ D +S S S +++C RE++ +
Sbjct: 110 SGNVSNRK----DETNARDTY--VSSFPRAPSTS-------DSVRLKC----REMLAAAL 152
Query: 202 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDP 261
++ ADEE + +E A++++ +D YK + R+ + NLKD
Sbjct: 153 RTGDDYIAIGADEE-----------ELGSQIEEAIYQEMRNTDMKYKNRVRSRISNLKDA 201
Query: 262 KNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
KNP+ R+ VL G + P+ MTA+EMASDE+ E R L KE R++
Sbjct: 202 KNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-------KEMRKNLTKEAIREH 248
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E + ++ +D Y+ + R+ +
Sbjct: 189 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIHQELKSTDMKYRNRVRSRIS 245
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 246 NLKDPRNPGLRRNVLSGAISTGLIAKMTAEEMASDEL 282
>gi|358254214|dbj|GAA54231.1| transcription elongation factor S-II, partial [Clonorchis sinensis]
Length = 143
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 222 ACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVV 281
A +S +AI +ESA+++ + +D YK + R + NL+D NP+ R VL G V P+ +
Sbjct: 5 AYESEFLAIRIESAIYDIFNNTDSKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVNPDKLA 64
Query: 282 GMTAKEMASDEM 293
MT++EMAS EM
Sbjct: 65 SMTSEEMASKEM 76
>gi|301777208|ref|XP_002924013.1| PREDICTED: SPOC domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 1182
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V A+ +V +E+ D V + ++V +A +E+A+F+ + YK KYR++L
Sbjct: 561 VRGTVVHAMQEVLWSRLQELPDLVLSEEAVEGIAAGIETALFDLTQATSCRYKTKYRSLL 620
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+NPD KV+ G V P +V M+ ++A E+ R ++ ++E+R
Sbjct: 621 FNLRDPRNPDLFLKVVQGDVTPHDLVRMSTAQLAPQELAR-WRDQEEKRG 669
>gi|359318997|ref|XP_003638964.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Canis lupus familiaris]
Length = 1183
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V A+ +V +E+ D V + ++V +A +E+A+F + YK KYR++L
Sbjct: 561 VRNTVVHAMQEVLRSRLQELPDLVLSEEAVEGIAAGIETALFNLTQTTSCRYKTKYRSLL 620
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+NPD KV+ G V PE +V M++ ++A E L ++ ++E+R
Sbjct: 621 FNLRDPRNPDLFLKVVRGDVTPEDLVQMSSIQLAPQE-LACWRDQEEKRG 669
>gi|395534413|ref|XP_003769236.1| PREDICTED: PHD finger protein 3 [Sarcophilus harrisii]
Length = 2029
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ V+ + D L K +++ +I +E + +VA +E +F + +D YK K
Sbjct: 916 DQIRQSVKHSLKDILMKRLTDSNLKIPEER----ASKVATKIEKELFSFFRDTDAKYKNK 971
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 972 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1014
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 128/294 (43%), Gaps = 67/294 (22%)
Query: 27 EKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDM 85
+K A +D L +L +T LL ST++ + + + T +++ A LI SW+ +
Sbjct: 17 QKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL 76
Query: 86 F----LEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSS 141
E+ DEKK EPA + + S E +E S +S
Sbjct: 77 LDGPSTEKDLDEKK--------KEPA----ITSQNSPEAREES---------------TS 109
Query: 142 SSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKV 201
S NV + +ETN+ D +S S S +++C RE++ +
Sbjct: 110 SGNVSNRK----DETNARDTY--VSSFPRAPSTS-------DSVRLKC----REMLAAAL 152
Query: 202 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDP 261
++ ADEE + +E A++++ +D YK + R+ + NLKD
Sbjct: 153 RTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDA 201
Query: 262 KNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
KNP+ R+ VL G + P+ MTA+EMASDE+ E R L KE R++
Sbjct: 202 KNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-------KEMRKNLTKEAIREH 248
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 128/294 (43%), Gaps = 67/294 (22%)
Query: 27 EKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDM 85
+K A +D L +L +T LL ST++ + + + T +++ A LI SW+ +
Sbjct: 17 QKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL 76
Query: 86 F----LEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSS 141
E+ DEKK EPA + + S E +E S +S
Sbjct: 77 LDGPSTEKDLDEKK--------KEPA----ITSQNSPEAREES---------------TS 109
Query: 142 SSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKV 201
S NV + +ETN+ D +S S S +++C RE++ +
Sbjct: 110 SGNVSNRK----DETNARDTY--VSSFPRAPSTS-------DSVRLKC----REMLAAAL 152
Query: 202 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDP 261
++ ADEE + +E A++++ +D YK + R+ + NLKD
Sbjct: 153 RTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDA 201
Query: 262 KNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
KNP+ R+ VL G + P+ MTA+EMASDE+ E R L KE R++
Sbjct: 202 KNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-------KEMRKNLTKEAIREH 248
>gi|349802183|gb|AEQ16564.1| putative transcription elongation factor a protein 1 [Pipa
carvalhoi]
Length = 208
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 222 ACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVV 281
D + +E A+F+++ +D YK + R+ + NLKD KNP+ RR VL G + +
Sbjct: 79 GADDEELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDAKNPNLRRNVLCGNIATDRFA 138
Query: 282 GMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
M+A+EMASDE+ E R L KE R++
Sbjct: 139 RMSAEEMASDEL-------KEMRKNLTKEAIREH 165
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 128/294 (43%), Gaps = 67/294 (22%)
Query: 27 EKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDM 85
+K A +D L +L +T LL ST++ + + + T +++ A LI SW+ +
Sbjct: 17 QKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL 76
Query: 86 F----LEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSS 141
E+ DEKK EPA + + S E +E S +S
Sbjct: 77 LDGPSTEKDLDEKK--------KEPA----ITSQNSPEAREES---------------TS 109
Query: 142 SSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKV 201
S NV + +ETN+ D +S S S +++C RE++ +
Sbjct: 110 SGNVSNRK----DETNARDTY--LSSFPRAPSTS-------DSVRLKC----REMLAAAL 152
Query: 202 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDP 261
++ ADEE + +E A++++ +D YK + R+ + NLKD
Sbjct: 153 RTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDA 201
Query: 262 KNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
KNP+ R+ VL G + P+ MTA+EMASDE+ E R L KE R++
Sbjct: 202 KNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-------KEMRKNLTKEAIREH 248
>gi|291396440|ref|XP_002714452.1| PREDICTED: PHD finger protein 3 [Oryctolagus cuniculus]
Length = 2194
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 183 SSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGR 242
++SK N R+ VR + D L K +++ ++ +E A +VA +E +F +
Sbjct: 1072 TTSKPSANQ-IRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRD 1126
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+D YK KYR+++ NLKDPKN +KVL G+V P+ ++ M +E+AS E+
Sbjct: 1127 TDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMNPEELASKEL 1177
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F G +D Y+ + R+ + NLKD KNPD RR VL G + P+ + MT++EMASD
Sbjct: 171 IEECIFRDVGNTDMKYRNRVRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEEMASD 230
Query: 292 EM 293
E+
Sbjct: 231 EL 232
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +A+++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 186 VRDKCVEMLS-AALKAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 242
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 243 NLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDEL 279
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 128/294 (43%), Gaps = 67/294 (22%)
Query: 27 EKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDM 85
+K A +D L +L +T LL ST++ + + + T +++ A LI SW+ +
Sbjct: 17 QKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL 76
Query: 86 F----LEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSS 141
E+ DEKK EPA + + S E +E S +S
Sbjct: 77 LDGPSTEKDLDEKK--------KEPA----ITSQNSPEAREES---------------TS 109
Query: 142 SSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKV 201
S NV + +ETN+ D +S S S +++C RE++ +
Sbjct: 110 SGNVSNRK----DETNARDTY--VSSFPRAPSTS-------DSVRLKC----REMLAAAL 152
Query: 202 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDP 261
++ ADEE + +E A++++ +D YK + R+ + NLKD
Sbjct: 153 RTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDA 201
Query: 262 KNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
KNP+ R+ VL G + P+ MTA+EMASDE+ E R L KE R++
Sbjct: 202 KNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-------KEMRKNLTKEAIREH 248
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 128/294 (43%), Gaps = 67/294 (22%)
Query: 27 EKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDM 85
+K A +D L +L +T LL ST++ + + + T +++ A LI SW+ +
Sbjct: 3 QKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL 62
Query: 86 F----LEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSS 141
E+ DEKK EPA + + S E +E S +S
Sbjct: 63 LDGPSTEKDLDEKK--------KEPA----ITSQNSPEAREES---------------TS 95
Query: 142 SSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKV 201
S NV + +ETN+ D +S S S +++C RE++ +
Sbjct: 96 SGNVSNRK----DETNARDTY--VSSFPRAPSTS-------DSVRLKC----REMLAAAL 138
Query: 202 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDP 261
++ ADEE + +E A++++ +D YK + R+ + NLKD
Sbjct: 139 RTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDA 187
Query: 262 KNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
KNP+ R+ VL G + P+ MTA+EMASDE+ E R L KE R++
Sbjct: 188 KNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-------KEMRKNLTKEAIREH 234
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 128/294 (43%), Gaps = 67/294 (22%)
Query: 27 EKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDM 85
+K A +D L +L +T LL ST++ + + + T +++ A LI SW+ +
Sbjct: 17 QKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL 76
Query: 86 F----LEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSS 141
E+ DEKK EPA + + S E +E S +S
Sbjct: 77 LDGPSTEKDLDEKK--------KEPA----ITSQNSPEAREES---------------TS 109
Query: 142 SSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKV 201
S NV + +ETN+ D +S S S +++C RE++ +
Sbjct: 110 SGNVSNRK----DETNARDTY--VSSFPRAPSTS-------DSVRLKC----REMLAAAL 152
Query: 202 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDP 261
++ ADEE + +E A++++ +D YK + R+ + NLKD
Sbjct: 153 RTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDA 201
Query: 262 KNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
KNP+ R+ VL G + P+ MTA+EMASDE+ E R L KE R++
Sbjct: 202 KNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-------KEMRKNLTKEAIREH 248
>gi|297827973|ref|XP_002881869.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
gi|297327708|gb|EFH58128.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 24/131 (18%)
Query: 188 RCNDCFREVVREKVCDALSKVSGEA-DEEIRDEVNACDSVRVAIALESAMFEKWGRSDGP 246
+ D R+ VRE + +L+KV+ E D E++ V ACD VAI++ESAMFE
Sbjct: 111 KTGDSKRDKVREILQTSLAKVATEVVDTEMKTRVTACDPWVVAISVESAMFES------- 163
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
NPD RRKVL G++ E +V M +EM S+++ + Q +E AR
Sbjct: 164 ---------------NNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKEVQR-IKENAR 207
Query: 307 LWKEHTRKYMQ 317
+E K +Q
Sbjct: 208 FKEESRMKMLQ 218
>gi|45549559|ref|NP_573049.2| CG8117 [Drosophila melanogaster]
gi|45446964|gb|AAF48482.2| CG8117 [Drosophila melanogaster]
gi|66571116|gb|AAY51523.1| IP08861p [Drosophila melanogaster]
gi|66772509|gb|AAY55566.1| IP09061p [Drosophila melanogaster]
gi|220943416|gb|ACL84251.1| CG8117-PA [synthetic construct]
gi|220953346|gb|ACL89216.1| CG8117-PA [synthetic construct]
Length = 162
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE A++ YK + R+ L NL+DPKNP+ R+K L GQ+ PE + MT +E
Sbjct: 32 MAAKLEDAIYGDLNGCKVKYKNRIRSRLANLRDPKNPELRQKFLLGQITPEELSKMTPEE 91
Query: 288 MASDEM 293
MASD+M
Sbjct: 92 MASDDM 97
>gi|149732314|ref|XP_001503413.1| PREDICTED: PHD finger protein 3 isoform 1 [Equus caballus]
Length = 2042
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 930 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFCFFRDTDAKYKNK 985
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 986 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1028
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 126/289 (43%), Gaps = 67/289 (23%)
Query: 32 AWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDMF---- 86
A +D L +L +T LL ST++ + + + T +++ A LI SW+ +
Sbjct: 1 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 60
Query: 87 LEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVV 146
E+ DEKK EPA + + S E +E S +SS NV
Sbjct: 61 TEKDLDEKK--------KEPA----ITSQNSPEAREES---------------TSSGNVS 93
Query: 147 RSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALS 206
+ +ETN+ D +S S S +++C RE++ +
Sbjct: 94 NRK----DETNARDTY--VSSFPRAPSTS-------DSVRLKC----REMLAAALRTGDD 136
Query: 207 KVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDF 266
++ ADEE + +E A++++ +D YK + R+ + NLKD KNP+
Sbjct: 137 YIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNL 185
Query: 267 RRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
R+ VL G + P+ MTA+EMASDE+ E R L KE R++
Sbjct: 186 RKNVLCGNIPPDLFARMTAEEMASDEL-------KEMRKNLTKEAIREH 227
>gi|395833389|ref|XP_003789719.1| PREDICTED: PHD finger protein 3 isoform 1 [Otolemur garnettii]
Length = 2041
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + + L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 928 DQIRQSVRHSLKEILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 983
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 984 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 1026
>gi|149732316|ref|XP_001503414.1| PREDICTED: PHD finger protein 3 isoform 2 [Equus caballus]
Length = 1954
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 842 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFCFFRDTDAKYKNK 897
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 898 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 940
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 182 LSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWG 241
L S + DC +R+K + LS V+ +A+++ +D CD ++A +E ++ +
Sbjct: 175 LLSPRYLTGDC----IRDKCVEMLS-VALKAEDDYKDYGVNCD--KMASEIEDHIYRELK 227
Query: 242 RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+D Y+ + R+ + NLKDPKNP RR VL G + + M A+EMASDE+
Sbjct: 228 STDMKYRNRVRSRISNLKDPKNPGLRRNVLSGAISTGLIAKMMAEEMASDEL 279
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|395833391|ref|XP_003789720.1| PREDICTED: PHD finger protein 3 isoform 2 [Otolemur garnettii]
Length = 1953
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + + L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 840 DQIRQSVRHSLKEILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 895
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 896 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 938
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 30/280 (10%)
Query: 24 GEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSW 82
G AE A +D L +LN ++ LL +T++ + + +H + K++ A LI +W
Sbjct: 165 GRAEGA-----LDLLKKLNSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 219
Query: 83 RDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEIS------GVGIVKVQKVDQ 136
+ + PG + K E+ DK E+ + S G+ + ++ ++
Sbjct: 220 KRLL------------DSPGPPKGEKGEERDKAKKEKGLDCSDWKAETGLSPPRKKRGEE 267
Query: 137 NSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHK-LSSSKIRCNDCF-- 193
S +S + + S + N S E + G L + S C+
Sbjct: 268 PKDRRDSVGSKSSASSSPKRPSMERSNSSTSKAESPKTPGSPLTPTFAPSVCLLAPCYLT 327
Query: 194 REVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRA 253
+ VR+K + LS + +A+++ +D CD ++A +E ++++ +D Y+ + R+
Sbjct: 328 GDSVRDKCVEMLS-AALKAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRS 384
Query: 254 VLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 385 RISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEEMASDEL 424
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + L+ + +A+++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 192 VRDKCVEMLA-AALKAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 248
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 249 NLKDPRNPGLRRNVLSGAISSGLIAKMTAEEMASDEL 285
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR K + LS+ D+ I + CD ++A +E +F ++ +D YK + R+ +
Sbjct: 150 VRIKCREMLSQALQAGDDYIAIGAD-CD--QLAAQIEEYIFCEFKNTDPKYKNRVRSRIA 206
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKD KNP+ R+ VL G V P+ + MTA+EMASDE+
Sbjct: 207 NLKDIKNPNLRKSVLCGNVSPDRMAKMTAQEMASDEL 243
>gi|346466499|gb|AEO33094.1| hypothetical protein [Amblyomma maculatum]
Length = 313
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 218 DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKP 277
D + C+ +A +E +++ ++G ++ YK + R+ + NLKD +NP R VL G + P
Sbjct: 170 DMPDGCNVDGLAAKIEESIYNEFGDTNMKYKNRVRSRVSNLKDSRNPALRLNVLHGAIDP 229
Query: 278 ETVVGMTAKEMASDEMLRSYQHEDEERARLWKE 310
E + M+A+EMASDEM E R R KE
Sbjct: 230 ERIARMSAEEMASDEM-------KELRQRFTKE 255
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 162 IEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 221
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 222 EL-------KEMRKNLTKEAIREH 238
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F G +D YK + R+ L NLKD KNP RR VL G + P+ + MT++E
Sbjct: 203 LAGQIEECIFRDVGNTDMKYKNRVRSRLSNLKDAKNPGLRRNVLCGAITPQQIAVMTSEE 262
Query: 288 MASDEM 293
MASDE+
Sbjct: 263 MASDEL 268
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +A+++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 164 VRDKCVEMLS-AALKAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 220
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 221 NLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDEL 257
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 198 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGN 257
RE + ++L +V GE + + E VA A E +FE++ ++ YK + R+ + N
Sbjct: 145 REMIVNSL-QVQGEFEAVTKPE-------EVAAACEQLIFEEFKDTNVKYKQRIRSRVNN 196
Query: 258 LKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
L+DPKNP + +VL G++ P + MT++EMASDEM + Q +E R
Sbjct: 197 LRDPKNPMLKVRVLGGEISPARLAVMTSEEMASDEMKKLRQEFTKEGIR 245
>gi|344254454|gb|EGW10558.1| Transcription elongation factor A protein 2 [Cricetulus griseus]
Length = 255
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D ++ +E +F G +D YK + R+ + NLKD KNP RR VL G + P+ + M
Sbjct: 118 DCEHLSAQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVM 177
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 178 TSEEMASDEL 187
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 171 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 230
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 231 EL-------KEMRKNLTKEAIREH 247
>gi|114620135|ref|XP_001151569.1| PREDICTED: transcription elongation factor A protein 1 isoform 3
[Pan troglodytes]
gi|397505491|ref|XP_003823294.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Pan paniscus]
gi|410212654|gb|JAA03546.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251520|gb|JAA13727.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298810|gb|JAA28005.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341537|gb|JAA39715.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 280
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 151 IEEAIYQEMRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 210
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 211 EL-------KEMRKNLTKEAIREH 227
>gi|291391945|ref|XP_002712401.1| PREDICTED: transcription elongation factor A 1 isoform 2
[Oryctolagus cuniculus]
Length = 279
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 150 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 209
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 210 EL-------KEMRKNLTKEAIREH 226
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEIRKNLTKEAIREH 248
>gi|405958419|gb|EKC24549.1| Transcription elongation factor A protein 1 [Crassostrea gigas]
Length = 369
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 171 EGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEV-NACDSVRVA 229
+G G L + S ND R RE + +L DEE++ + NA +A
Sbjct: 111 QGSEPGKTLMRQDSEASITNDPVRIKCRELLASSLV-----LDEEVKVRIPNAQCPKELA 165
Query: 230 IALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
+E ++ ++ +D YK + R+ + NLKD KNP + V+ G + PE + M+A+EMA
Sbjct: 166 AKIEDSIHLEFKNTDQKYKARIRSRVANLKDKKNPKLKEGVIMGLIPPERIANMSAEEMA 225
Query: 290 SDEM 293
SDEM
Sbjct: 226 SDEM 229
>gi|427779725|gb|JAA55314.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1186
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 136 QNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFRE 195
Q + S +N + + TNSA N S E + S +R N R+
Sbjct: 966 QPAEPSGANTTSTAPTPSSTTNSAPAENTSGSTEAVTEVKKTEPAQPSIEPVRLN--VRK 1023
Query: 196 VVREKV---CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYR 252
V+R+ + C S +S DE +R R+A+ +E +F+ + + YK KYR
Sbjct: 1024 VLRDALLNRCKEASDLSLSGDE-VR---------RMALRIEEELFKVFRDTGTRYKSKYR 1073
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHT 312
+++ N+KD +N RK+L G++ P+ +V MT +E+AS E+ R W+E
Sbjct: 1074 SLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELAR------------WREQE 1121
Query: 313 RKYMQRM 319
K+ M
Sbjct: 1122 NKHTIEM 1128
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D ++ +E +F G +D YK + R+ + NLKD KNP RR VL G + P+ + M
Sbjct: 162 DCEHLSAQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVM 221
Query: 284 TAKEMASDEM 293
T++EMASDE+
Sbjct: 222 TSEEMASDEL 231
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|126342557|ref|XP_001363001.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 151 IEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 210
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 211 EL-------KEIRKNLTKEAIREH 227
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 171 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 230
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 231 EL-------KEMRKNLTKEAIREH 247
>gi|45439355|ref|NP_958845.1| transcription elongation factor A protein 1 isoform 2 [Homo
sapiens]
gi|332213783|ref|XP_003256010.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Nomascus leucogenys]
gi|426359605|ref|XP_004047058.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|37072|emb|CAA40484.1| transcription elongation factor [Homo sapiens]
Length = 280
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 151 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 210
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 211 EL-------KEMRKNLTKEAIREH 227
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|345304943|ref|XP_001505863.2| PREDICTED: PHD finger protein 3-like [Ornithorhynchus anatinus]
Length = 1190
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ V+ + D L K +++ +I +E + +VA+ +E +F + +D YK K
Sbjct: 82 DQIRQSVKHSLKDILMKRLTDSNLKIPEER----ASKVAMKIEKELFSFFRDTDAKYKNK 137
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR+++ NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 138 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 180
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|119607146|gb|EAW86740.1| transcription elongation factor A (SII), 1, isoform CRA_b [Homo
sapiens]
Length = 260
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 131 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 190
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 191 EL-------KEMRKNLTKEAIREH 207
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|427780239|gb|JAA55571.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2067
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 136 QNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFRE 195
Q + S +N + + TNSA N S E + S +R N R+
Sbjct: 934 QPAEPSGANTTSTAPTPSSTTNSAPAENTSGSTEAVTEVKKTEPAQPSIEPVRLN--VRK 991
Query: 196 VVREKV---CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYR 252
V+R+ + C S +S DE +R R+A+ +E +F+ + + YK KYR
Sbjct: 992 VLRDALLNRCKEASDLSLSGDE-VR---------RMALRIEEELFKVFRDTGTRYKSKYR 1041
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHT 312
+++ N+KD +N RK+L G++ P+ +V MT +E+AS E+ R W+E
Sbjct: 1042 SLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELAR------------WREQE 1089
Query: 313 RKYMQRM 319
K+ M
Sbjct: 1090 NKHTIEM 1096
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 171 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 230
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 231 EL-------KEMRKNLTKEAIREH 247
>gi|427788337|gb|JAA59620.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2031
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 136 QNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFRE 195
Q + S +N + + TNSA N S E + S +R N R+
Sbjct: 934 QPAEPSGANTTSTAPTPSSTTNSAPAENTSGSTEAVTEVKKTEPAQPSIEPVRLN--VRK 991
Query: 196 VVREKV---CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYR 252
V+R+ + C S +S DE +R R+A+ +E +F+ + + YK KYR
Sbjct: 992 VLRDALLNRCKEASDLSLSGDE-VR---------RMALRIEEELFKVFRDTGTRYKSKYR 1041
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHT 312
+++ N+KD +N RK+L G++ P+ +V MT +E+AS E+ R W+E
Sbjct: 1042 SLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELAR------------WREQE 1089
Query: 313 RKYMQRM 319
K+ M
Sbjct: 1090 NKHTIEM 1096
>gi|328709087|ref|XP_001946550.2| PREDICTED: hypothetical protein LOC100167834 [Acyrthosiphon pisum]
Length = 1750
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 193 FREVVREKVCDALS-KVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKY 251
R VR+ + ++LS ++S E + + ++ D + + +E ++ ++ + D YK KY
Sbjct: 989 LRSNVRKSLLESLSSRISEEPELKTAEQ----DLEELILKIEEELYNQFSKVDQKYKTKY 1044
Query: 252 RAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R++L N+KDPKN +F +K++F V P +V MTA EMAS E+
Sbjct: 1045 RSLLFNIKDPKNLNFFKKIMFKWVTPYQLVRMTADEMASQEL 1086
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 184 SSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRS 243
S +++ D R+ E + AL D++ +D C+++ I E ++++ +
Sbjct: 239 SPRLQTGDSIRDKCIEMLTAAL-----RTDDDYKDYGTNCEAMGAEI--EDYIYQETKAT 291
Query: 244 DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
D YK + R+ + NLKDPKNP+ R+ VL G ++ + MTA+EMASDE+
Sbjct: 292 DMKYKNRVRSRISNLKDPKNPNLRKNVLAGAIELSRIASMTAEEMASDEL 341
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|395841854|ref|XP_003793745.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Otolemur garnettii]
Length = 280
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 151 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 210
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 211 EL-------KEMRKNLTKEAIREH 227
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 161 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 220
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 221 EL-------KEMRKNLTKEAIREH 237
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 183 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 242
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 243 EL-------KEMRKNLTKEAIREH 259
>gi|221042038|dbj|BAH12696.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 151 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 210
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 211 EL-------KEMRKNLTKEAIREH 227
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 172 IEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 231
Query: 292 EMLRSYQHEDEERAR 306
E+ +++ +E R
Sbjct: 232 ELKEMHKNLTKEAIR 246
>gi|427788339|gb|JAA59621.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2019
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 136 QNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFRE 195
Q + S +N + + TNSA N S E + S +R N R+
Sbjct: 922 QPAEPSGANTTSTAPTPSSTTNSAPAENTSGSTEAVTEVKKTEPAQPSIEPVRLN--VRK 979
Query: 196 VVREKV---CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYR 252
V+R+ + C S +S DE +R R+A+ +E +F+ + + YK KYR
Sbjct: 980 VLRDALLNRCKEASDLSLSGDE-VR---------RMALRIEEELFKVFRDTGTRYKSKYR 1029
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHT 312
+++ N+KD +N RK+L G++ P+ +V MT +E+AS E+ R W+E
Sbjct: 1030 SLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELAR------------WREQE 1077
Query: 313 RKYMQRM 319
K+ M
Sbjct: 1078 NKHTIEM 1084
>gi|256071836|ref|XP_002572244.1| transcription elongation factor s-II [Schistosoma mansoni]
gi|360043833|emb|CCD81379.1| putative transcription elongation factor s-II [Schistosoma mansoni]
Length = 318
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 222 ACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVV 281
A +S +AI +ES++++ + +D YK + R + NL+D NP+ R VL G V P+ +
Sbjct: 179 AYESEFLAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLA 238
Query: 282 GMTAKEMASDEM 293
MT++EMAS EM
Sbjct: 239 SMTSEEMASKEM 250
>gi|126303931|ref|XP_001375763.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 151 IEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 210
Query: 292 EMLRSYQHEDEERAR 306
E+ +++ +E R
Sbjct: 211 ELKEMHKNLTKEAIR 225
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F G +D YK + R+ + NLKD KNP RR VL G + P+ + MT++EMASD
Sbjct: 170 IEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASD 229
Query: 292 EM 293
E+
Sbjct: 230 EL 231
>gi|201937|gb|AAA40418.1| transcription factor S-II [Mus musculus]
Length = 266
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 137 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 196
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 197 EL-------KEMRKNLTKEAIREH 213
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F G +D YK + R+ + NLKD KNP RR VL G + P+ + MT++EMASD
Sbjct: 170 IEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASD 229
Query: 292 EM 293
E+
Sbjct: 230 EL 231
>gi|91833|pir||JX0167 transcription elongation factor S-II-related protein L121, hepatic
- mouse
Length = 235
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 106 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 165
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 166 EL-------KEMRKNLTKEAIREH 182
>gi|3347836|gb|AAC64680.1| transcription elongation factor S-II [Xenopus laevis]
Length = 121
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+D Y+ + R+ + NLKDPKNP+ R+ VL G V P+++ MTA+EMASDE+
Sbjct: 3 TDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDEL 53
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F G +D YK + R+ + NLKD KNP RR VL G + P+ + MT++EMASD
Sbjct: 144 IEECIFLDVGNADMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASD 203
Query: 292 EM 293
E+
Sbjct: 204 EL 205
>gi|220592|dbj|BAA00768.1| unnamed protein product [Mus musculus]
Length = 235
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 106 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 165
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 166 EL-------KEMRKNLTKEAIREH 182
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 186 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 245
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 246 EL-------KEMRKNLTKEAIREH 262
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ +TA+EMASD
Sbjct: 172 IEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARLTAEEMASD 231
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 232 EL-------KEMRKNLTKEAIREH 248
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS V+ +A+++ ++ CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 182 VRDKCVEMLS-VALKAEDDYKNYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 238
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKD KNP RR VL G + E + M A+EMASDE+
Sbjct: 239 NLKDSKNPGLRRNVLSGAISTELIAKMMAEEMASDEL 275
>gi|351709942|gb|EHB12861.1| SPOC domain-containing protein 1 [Heterocephalus glaber]
Length = 1116
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+F+ + YKIKYR++L NL+DP+NPD KV+ G V P +V M + +
Sbjct: 550 IAAGIEAALFDLTQGTSCRYKIKYRSLLFNLRDPRNPDLFLKVVHGDVTPHDLVRMNSVQ 609
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYMQRM 319
+A E+ R ++ ++E+R +K + R+
Sbjct: 610 LAPQELAR-WRDQEEKRGLEIIAQQQKELHRL 640
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
L +F++ +D Y+ + R+ + NLKDPKNP+ RR VL G + P + MTA+EMASD
Sbjct: 272 LAPHIFQELKSTDMKYRNRVRSRISNLKDPKNPNLRRNVLCGAIAPALIARMTAEEMASD 331
Query: 292 EM 293
E+
Sbjct: 332 EL 333
>gi|390348322|ref|XP_799219.3| PREDICTED: transcription elongation factor S-II-like
[Strongylocentrotus purpuratus]
Length = 306
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAV 254
+VVRE+ L A ++ D D +A +E ++ ++G SD YK + R+
Sbjct: 140 DVVRERCKQMLVNALKVAIPDLDDGEELQDPEELAGIIEDCIYTEFGNSDLRYKNRVRSR 199
Query: 255 LGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ NL+D KNPD RR VL G + E + M A+EMAS+ M
Sbjct: 200 VSNLQDSKNPDLRRMVLRGTIPAEKIASMAAEEMASEAM 238
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA-----LESAMFEKWGRSDGPYKIKY 251
VR+K + LS + +A+++ +D CD + I L S ++++ +D Y+ +
Sbjct: 164 VRDKCVEMLS-AALKAEDDYKDYGVNCDKMASEIEDHILELRSHIYQELKSTDMKYRNRV 222
Query: 252 RAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R+ + NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 223 RSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEEMASDEL 264
>gi|126342513|ref|XP_001362316.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ +TA+EMASD
Sbjct: 151 IEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARLTAEEMASD 210
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 211 EL-------KEMRKNLTKEAIREH 227
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 67/294 (22%)
Query: 27 EKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDM 85
+K A +D L +L +T LL ST++ + + + T +++ A LI SW+ +
Sbjct: 17 QKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL 76
Query: 86 F----LEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSS 141
E+ DEKK EPA + + S E +E S +S
Sbjct: 77 LDGPSTEKDLDEKK--------KEPA----ITSQNSPEAREES---------------TS 109
Query: 142 SSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKV 201
S NV + +ETN+ D +S S S +++C RE++ +
Sbjct: 110 SGNVSNRK----DETNARDTY--VSSFPRAPSTS-------DSVRLKC----REMLAAAL 152
Query: 202 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDP 261
++ ADEE + +E A++++ +D YK + R+ + NLKD
Sbjct: 153 RTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDA 201
Query: 262 KNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
KNP+ R+ VL G + P+ MTA+EM SDE+ E R L KE R++
Sbjct: 202 KNPNLRKNVLCGNIPPDLFARMTAEEMPSDEL-------KEMRKNLTKEAIREH 248
>gi|431891151|gb|ELK02028.1| SPOC domain-containing protein 1 [Pteropus alecto]
Length = 1093
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+F+ ++ YK KYR++L NL+DP+NPD KV+ G + P +V M++ +
Sbjct: 582 IAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDITPHGLVQMSSMQ 641
Query: 288 MASDEMLRSYQHEDEERA 305
+A E+ R ++ ++E+R
Sbjct: 642 LAPQELAR-WRDQEEKRG 658
>gi|226478976|emb|CAX72983.1| RNA polymerase II elongation factor [Schistosoma japonicum]
Length = 317
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 222 ACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVV 281
A +S +AI +ES++++ + +D YK + R + NL+D NP+ R VL G V P+ +
Sbjct: 178 AYESEFLAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLA 237
Query: 282 GMTAKEMASDEM 293
MT++EMAS EM
Sbjct: 238 SMTSEEMASKEM 249
>gi|302831355|ref|XP_002947243.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
gi|300267650|gb|EFJ51833.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
Length = 304
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 188 RCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPY 247
RC + R+ VR + +AL+ I D AL + G Y
Sbjct: 152 RCGNDTRDKVRVMLAEALAVGFNSGGAVIED------------ALHELLAGSGSSVSGEY 199
Query: 248 KIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARL 307
K K R++ NLKD KNPD R +VL G + PE++V M+A+E+ASDE R + E + L
Sbjct: 200 KAKARSLCFNLKDAKNPDLRERVLSGSIPPESLVRMSAEELASDEQKRKNR---EMKEWL 256
Query: 308 WKEHTR 313
KE TR
Sbjct: 257 AKEATR 262
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
++ +E +F G +D YK + R+ + NLKD KNPD RR VL G + P+ + MT++E
Sbjct: 459 LSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEE 518
Query: 288 MASDEM 293
MASDE+
Sbjct: 519 MASDEL 524
>gi|410929091|ref|XP_003977933.1| PREDICTED: transcription elongation factor A protein 2-like
[Takifugu rubripes]
Length = 284
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E +++++ ++ YK + R+ + NLKD KNP+ RR VL G + P+ + M
Sbjct: 164 DCQHLAAQIEEEIYQEFKSTETKYKSRLRSRISNLKDQKNPELRRNVLCGNISPQRIASM 223
Query: 284 TAKEMASDEM 293
+A+EMAS E+
Sbjct: 224 SAEEMASAEL 233
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 194 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 253
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 254 EL-------KEMRKNLTKEAIREH 270
>gi|440896934|gb|ELR48725.1| SPOC domain-containing protein 1, partial [Bos grunniens mutus]
Length = 1171
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+F ++G YK KYR++L NL+DP+NP+ KV+ G + P +V M++ +
Sbjct: 581 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 640
Query: 288 MASDEMLRSYQHEDEERA 305
+A E+ R ++ ++E+R
Sbjct: 641 LAPQELAR-WRDQEEKRG 657
>gi|194207770|ref|XP_001916902.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Equus caballus]
Length = 1162
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V A+ +V +E+ D V + ++V +A +E+A+F+ ++ YK KYR++L
Sbjct: 534 VRGTVVRAMQEVLWSRLQELPDLVLSEEAVEGIAAGIEAALFDLTQATNCRYKTKYRSLL 593
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+NPD KV+ G V P+ +V M++ ++A + L ++ ++E+R
Sbjct: 594 FNLRDPRNPDLFLKVVHGDVTPQGLVQMSSIQLAP-QRLAHWRDQEEKRG 642
>gi|50552628|ref|XP_503724.1| YALI0E09196p [Yarrowia lipolytica]
gi|49649593|emb|CAG79314.1| YALI0E09196p [Yarrowia lipolytica CLIB122]
Length = 295
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 107/268 (39%), Gaps = 57/268 (21%)
Query: 27 EKAWTAWCIDALDQLNKS-DITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDM 85
EKA D L L+K + T LL T+L + L +I D +I SW+D
Sbjct: 16 EKASGEAVYDILQVLHKEVEPTEKLLRETKLGIAVNKLRTSSDSRISDLVKKMIKSWKDT 75
Query: 86 FLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNV 145
Q RD K K+E K T EE + + ++S++SS N
Sbjct: 76 VTAQKRDASK------------KVEG-KKETKEESRPV------------KSSSASSGNA 110
Query: 146 VRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDAL 205
+ T + D V+ + + + VR + D
Sbjct: 111 TSYTPPSGQRTPAKDGVST--------------------------EIYSDKVRNRCIDVT 144
Query: 206 SKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPD 265
+EV AC A A+E+ +++ + G Y+ K R++ NLKDPKNP
Sbjct: 145 YTALAVGMTAHPNEVLAC-----AKAIENEVYKMENGTGGNYRPKMRSLYINLKDPKNPG 199
Query: 266 FRRKVLFGQVKPETVVGMTAKEMASDEM 293
R V+ G++ E + M+ +EMASDE+
Sbjct: 200 LRGNVISGKISAERLCRMSPQEMASDEL 227
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 220 IEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 279
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 280 EL-------KEMRKNLTKEAIREH 296
>gi|412992662|emb|CCO18642.1| predicted protein [Bathycoccus prasinos]
Length = 331
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 166 NSITEEGEASGI-ILHKLSSSKI-RCNDCFREVVREKVCDALSKVSGEADEEIRDEVNAC 223
N+ TE E S + + + +SKI + N+ R+ R+ + L+ E + E +++
Sbjct: 137 NTTTENDEKSALEQVQRTIASKIEQTNNATRDRSRDVIAYGLALAHCEGNCE---DISVT 193
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
R+ +E AM EKW YK K R + N+KDPKNPD RR + ++ T++ +
Sbjct: 194 SLARIVEEVEDAMSEKWKDLGKEYKAKLRQLAFNMKDPKNPDLRRAIAKREIDATTLIDL 253
Query: 284 TAKEMASDE 292
+++E+ SDE
Sbjct: 254 SSEELGSDE 262
>gi|208968915|dbj|BAG74296.1| Transcription elongation factor A protein 1 [synthetic construct]
Length = 284
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 155 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 214
Query: 292 EMLRSYQHEDEERAR 306
E+ +++ +E R
Sbjct: 215 ELKEMWKNLTKEAIR 229
>gi|344272860|ref|XP_003408247.1| PREDICTED: transcription elongation factor A protein 1-like
[Loxodonta africana]
Length = 380
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 186 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 245
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 246 EL-------KEMRKNLTKEAIREH 262
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R RE +C+AL +G+ E + +AI LE A++ ++ +D YK +
Sbjct: 164 DAVRLKCREMLCNALK--TGDIPE------GWPEPEEMAIELEEAIYAEFRNTDMKYKNR 215
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R+ + NLKDPKNP R + G + + + MT +EMASDEM
Sbjct: 216 VRSRVANLKDPKNPTLRGNFMCGAITAQQLAKMTPEEMASDEM 258
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
+R+K + L+ D+ VN CDS+ I E ++++ +D YK + R+ +
Sbjct: 359 IRDKCIEMLAAALRTDDDHKEFGVN-CDSMGAEI--EDYIYQEIKATDMKYKNRVRSRIS 415
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDPKNP RR VL G ++ + M+A+EMASDE+
Sbjct: 416 NLKDPKNPGLRRNVLAGSIELSRIASMSAEEMASDEL 452
>gi|356509950|ref|XP_003523705.1| PREDICTED: uncharacterized protein LOC100791982 [Glycine max]
Length = 1090
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+ +F+ +G + YK K R++L NLKD NP+ R +V+FG++ PE + MTA+E
Sbjct: 366 LASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDHNNPELRERVMFGKIPPEQLCSMTAEE 425
Query: 288 MASDEM 293
+AS E+
Sbjct: 426 LASKEL 431
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 269 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 328
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 329 EL-------KEMRKNLTKEAIREH 345
>gi|194664368|ref|XP_588581.4| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|297472143|ref|XP_002685704.1| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|296490254|tpg|DAA32367.1| TPA: SPOC domain containing 1-like [Bos taurus]
Length = 1249
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+F ++G YK KYR++L NL+DP+NP+ KV+ G + P +V M++ +
Sbjct: 659 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 718
Query: 288 MASDEMLRSYQHEDEERA 305
+A E+ R ++ ++E+R
Sbjct: 719 LAPQELAR-WRDQEEKRG 735
>gi|145349019|ref|XP_001418938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579168|gb|ABO97231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 528
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYR 252
R VRE + A+ + E DE N S VA A+ESA+++K G +D Y+ + R
Sbjct: 11 IRSTVREFILKAMEMAAEETKASGHDEANGTPS-EVAAAVESALYKKCGSADKEYRTRAR 69
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEML 294
++ NL+D +NP R +VL +K +V M+ ++A+ E++
Sbjct: 70 SLKSNLQDVRNPQLRARVLANDLKASQLVDMSPLQLANKELV 111
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS +A+++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 392 VRDKCVEMLSAAL-KAEDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 448
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 449 NLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 485
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 237 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 296
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 297 EL-------KEMRKNLTKEAIREH 313
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE--KWGRSDGPYKIKYRAV 254
VR+K + LS + +AD++ +D CD ++A +E + E + +D Y+ + R+
Sbjct: 165 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHILELGELKSTDMKYRNRVRSR 221
Query: 255 LGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 222 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 260
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E +++ +D YK + R+ + NLKD KNP+ ++ VL G + PE + M
Sbjct: 137 DCEHIAAQIEECIYQDIKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVM 196
Query: 284 TAKEMASDEM 293
T++EMAS+E+
Sbjct: 197 TSEEMASNEL 206
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D ++ +E +++ +D YK + R+ + NLKD KNPD R+ VL G + PE + M
Sbjct: 163 DCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVM 222
Query: 284 TAKEMASDEM 293
T++EMAS+E+
Sbjct: 223 TSEEMASNEL 232
>gi|344248661|gb|EGW04765.1| Transcription elongation factor A protein 3 [Cricetulus griseus]
Length = 138
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 233 ESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
++ ++++ +D Y+ + R+ + NLKDP+NP RR VL G + P + MTA+EMASDE
Sbjct: 8 QTHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDE 67
Query: 293 M 293
+
Sbjct: 68 L 68
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 60/285 (21%)
Query: 27 EKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPT-KKIQDFASDLIVSWRDM 85
+K A +D L +L +T LL ST++ + + + T +++ A LI SW+ +
Sbjct: 17 QKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL 76
Query: 86 F----LEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSS 141
E+ DEKK EPA + + S E +E S +S
Sbjct: 77 LDGPSTEKDLDEKK--------KEPA----ITSQNSPEAREES---------------TS 109
Query: 142 SSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKV 201
S NV + +ETN+ D +S S S +++C RE++ +
Sbjct: 110 SGNVSNRK----DETNARDTY--VSSFPRAPSTS-------DSVQLKC----REMLAAAL 152
Query: 202 CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDP 261
++ ADEE + +E A++++ +D YK + R+ + NLKD
Sbjct: 153 RTGDDYIAIGADEE-----------ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDA 201
Query: 262 KNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
KNP R+ VL G + P+ MTA+EMASDE+ +++ +E R
Sbjct: 202 KNPYLRKNVLCGNIPPDLFARMTAEEMASDELKEMWKNLTKEAIR 246
>gi|428183038|gb|EKX51897.1| hypothetical protein GUITHDRAFT_102510 [Guillardia theta CCMP2712]
Length = 298
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R VRE A + GE+D + +D ++ +ESAM+E +G ++ Y
Sbjct: 126 DGKRLKVRELFEKAFADWKGESDVDRKD---------LSARIESAMYEHFGGANEQYLNH 176
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEER 304
++V NL DPKNPDFR KV+FG + E + +++ +MA + + + E++
Sbjct: 177 AKSVKFNLSDPKNPDFRSKVIFGDIDAEEIPKLSSGQMAGKDKIEQKKANKEDK 230
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + +S D+ VN CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 187 VRDKCIEMISAALKMDDDYKEFGVN-CD--KMAAEIEDHIYQELKGTDMKYRNRVRSRIS 243
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDPKNP RR VL G + + MTA+EMASDE+
Sbjct: 244 NLKDPKNPGLRRNVLCGAISAGRIAKMTAEEMASDEL 280
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 222 ACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVV 281
D + +E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+
Sbjct: 162 GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFA 221
Query: 282 GMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
MTA+EMASDE+ E R L KE R++
Sbjct: 222 RMTAEEMASDEL-------KEMRKNLTKEAIREH 248
>gi|410920567|ref|XP_003973755.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Takifugu rubripes]
Length = 2311
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
N+ R+ +R + D L K ++D+ ++ + R+A A+E MF +D YK
Sbjct: 639 NNQMRQNIRRSLTDILYKRVSDSDDL---KMTESEVGRLAFAIEKEMFNLCLNTDSKYKN 695
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
KYR+++ NLKDPKN +V+ G V P +V ++A+E+ S EM
Sbjct: 696 KYRSLMFNLKDPKNKGLFYRVIGGDVTPFRLVRLSAEELLSKEM 739
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E +++ +D YK + R+ + NLKD KNP+ ++ VL G + PE + M
Sbjct: 163 DCEHIAAQIEECIYQDIKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVM 222
Query: 284 TAKEMASDEM 293
T++EMAS+E+
Sbjct: 223 TSEEMASNEL 232
>gi|321466977|gb|EFX77969.1| hypothetical protein DAPPUDRAFT_53771 [Daphnia pulex]
Length = 299
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE +++++ +D YK + R+ + NLKD +NP+ R L GQV P + MT++E
Sbjct: 166 LAQMLEECIYKEFRNTDMKYKNRVRSRVSNLKDARNPNLRLNFLCGQVSPARLSNMTSEE 225
Query: 288 MASDEM 293
MASDEM
Sbjct: 226 MASDEM 231
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +++ +D YK + R+ + NLKD KNPD R+ VL G + PE + MT++E
Sbjct: 166 MAAQIEEFIYQDVKNTDLKYKNRVRSRISNLKDSKNPDLRKNVLCGVITPEQIAVMTSEE 225
Query: 288 MASDEM 293
MAS+E+
Sbjct: 226 MASNEL 231
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D ++ +E +++ +D YK + R+ + NLKD KNPD R+ VL G + PE + M
Sbjct: 164 DCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVM 223
Query: 284 TAKEMASDEM 293
T++EMAS+E+
Sbjct: 224 TSEEMASNEL 233
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E +++ +D YK + R+ + NLKD KNP+ ++ VL G + PE + M
Sbjct: 163 DCEHIAAQIEECIYQDVKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVM 222
Query: 284 TAKEMASDEM 293
T++EMAS+E+
Sbjct: 223 TSEEMASNEL 232
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F G +D YK + R+ + NLKD KNP RR VL G + P+ + MT++EMASDE+
Sbjct: 173 IFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDEL 230
>gi|357466369|ref|XP_003603469.1| Transcription elongation factor A protein [Medicago truncatula]
gi|355492517|gb|AES73720.1| Transcription elongation factor A protein [Medicago truncatula]
Length = 1132
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+ +F+ +G + YK K R++L NLKD NP+ R +V+FG++ PE + MTA+E
Sbjct: 396 LASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKILPEQLCSMTAEE 455
Query: 288 MASDEM 293
+AS E+
Sbjct: 456 LASKEL 461
>gi|79563173|ref|NP_180135.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|330252635|gb|AEC07729.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 745
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E+ +F+ +G + YK K R++L NLKD NP R KV++G++ E + M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 284 TAKEMASDEMLRSYQHEDEERARL 307
+A+E+AS E+ Q + EE A++
Sbjct: 375 SAEELASKELAEWRQAKAEEMAQM 398
>gi|426328836|ref|XP_004025454.1| PREDICTED: SPOC domain-containing protein 1 [Gorilla gorilla
gorilla]
Length = 1173
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V +E+ D V + + V +A +E+A+++ ++G YK KYR++L
Sbjct: 608 VRGTVVRSMQEVLWTRLQELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 667
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V P +V M++ ++A E+ R ++ ++E+R
Sbjct: 668 FNLRDPRNLDLFLKVVHGDVNPYDLVRMSSMQLAPQELAR-WRDQEEKRG 716
>gi|196008337|ref|XP_002114034.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
gi|190583053|gb|EDV23124.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
Length = 302
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 231 ALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMAS 290
L A+F++ + YK + R+ + NLKD KNP+ +KVL G + PE + MTA+EMAS
Sbjct: 160 GLNKAIFKELKGPNMKYKNRVRSRISNLKDSKNPNLCQKVLSGIITPEQIAKMTAEEMAS 219
Query: 291 DEMLRSYQHEDEERAR 306
DEM + Q +E R
Sbjct: 220 DEMKKLRQGYAKEGIR 235
>gi|51968872|dbj|BAD43128.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 745
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 52/84 (61%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E+ +F+ +G + YK K R++L NLKD NP R KV++G++ E + M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 284 TAKEMASDEMLRSYQHEDEERARL 307
+A+E+AS E+ Q + EE A++
Sbjct: 375 SAEELASKELAEWRQAKAEEMAQM 398
>gi|149024308|gb|EDL80805.1| transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 299
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +A+++ +D CD ++A +E+ ++++ +D Y+ + R+ +
Sbjct: 187 VRDKCVEMLS-AALKAEDDFKDYGVNCD--KLASEIETHIYQELKSTDMKYRNRVRSRIS 243
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTA--KEMASDEMLRSY 297
NLKDP+NP RR VL G + PE + MTA + ++DE + ++
Sbjct: 244 NLKDPRNPGLRRNVLSGTISPELIAKMTAEVQTRSADEPMTTF 286
>gi|348570704|ref|XP_003471137.1| PREDICTED: SPOC domain-containing protein 1-like [Cavia porcellus]
Length = 1143
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 48/76 (63%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+F+ + YK KYR +L NL+DP+NPD KV+ G V P +V M++ +
Sbjct: 565 IAADIEAALFDLMQGTTYRYKTKYRTLLFNLRDPRNPDLFLKVVHGNVTPHDLVRMSSVQ 624
Query: 288 MASDEMLRSYQHEDEE 303
+AS E+ R E+++
Sbjct: 625 LASQELARWRDQEEKK 640
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + L+ + D + ++ CDS+ A +E ++++ +D YK + R+ +
Sbjct: 325 VRDKCIEMLA-AALRTDNDYKEFGTNCDSM--AAEIEDHIYQEIKATDMKYKNRVRSRIS 381
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDPKNP R+ VL G + + M+A+EMASDE+
Sbjct: 382 NLKDPKNPGLRKNVLAGTLALSRIASMSAEEMASDEL 418
>gi|403293239|ref|XP_003937628.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Saimiri boliviensis boliviensis]
Length = 1200
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 72/124 (58%), Gaps = 2/124 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V +A +E+A+++ +DG YK KYR++L
Sbjct: 605 VRGTVFRSMQEVLWTRLRELPDLVLSEEVVEGIAAGIEAALWDLTQGTDGRYKAKYRSLL 664
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
NL+DP+N D +V+ G V P +V M++ ++A E+ R ++ ++E+R E +K
Sbjct: 665 FNLRDPRNLDLFLRVVHGDVNPYDLVRMSSMQLAPQELAR-WRDQEEKRGLDIIEQQQKE 723
Query: 316 MQRM 319
+R+
Sbjct: 724 PRRL 727
>gi|4874303|gb|AAD31365.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 643
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 52/85 (61%)
Query: 223 CDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
D +A +E+ +F+ +G + YK K R++L NLKD NP R KV++G++ E +
Sbjct: 263 LDPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCS 322
Query: 283 MTAKEMASDEMLRSYQHEDEERARL 307
M+A+E+AS E+ Q + EE A++
Sbjct: 323 MSAEELASKELAEWRQAKAEEMAQM 347
>gi|22327517|ref|NP_680377.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|332007413|gb|AED94796.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 233
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 20/135 (14%)
Query: 184 SSKIRCNDCFREVVREKVCDALSKVSGEA-DEEIRDEV-NACDSVRVAIALESAMFEKWG 241
S+ + D R+ V E + +L+KV+ E D E++ V CD VA+++ESAM
Sbjct: 107 STMKKTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCDPWVVAVSVESAM----- 161
Query: 242 RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHED 301
++L N+ D NPD RRKVL G++ E +V M EM S+++ + Q
Sbjct: 162 -----------SILFNMGDSNNPDLRRKVLIGEISGERLVKMEKDEMGSEKIQKEVQR-I 209
Query: 302 EERARLWKEHTRKYM 316
+ERAR +KE +R M
Sbjct: 210 KERAR-FKEESRMKM 223
>gi|390465645|ref|XP_003733445.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Callithrix jacchus]
Length = 1096
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V +A +E+A+++ ++G YK KYR++L
Sbjct: 507 VRGTVVRSMQEVLWTRLRELPDLVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 566
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V P +V M+++++A E+ R ++ ++E+R
Sbjct: 567 FNLRDPRNLDLFLKVVHGDVNPYDLVRMSSRQLAPQELAR-WRDQEEKRG 615
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 233 ESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
E ++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASDE
Sbjct: 174 EVPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDE 233
Query: 293 MLRSYQHEDEERARLWKEHTRKY 315
+ E R L KE R++
Sbjct: 234 L-------KEMRKNLTKEAIREH 249
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F + +D YK + R+ + NLKD KNPD R+ VL G + PE + M+ +E
Sbjct: 159 LAAQIEEVVFRELQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGIITPEQIAIMSCEE 218
Query: 288 MASDEM 293
MAS+E+
Sbjct: 219 MASNEL 224
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + + D + ++ CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 201 VRDKCVEMLS-AALKMDGDYKEYGVNCD--KMASEIEDHIYQELKGTDMKYRNRVRSRIS 257
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM--LRS 296
NLKDP+NP RR VL G + + MTA+EMASDE+ LRS
Sbjct: 258 NLKDPRNPSLRRNVLCGAISTSLIARMTAEEMASDELKELRS 299
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 233 ESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
E ++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASDE
Sbjct: 174 EVPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDE 233
Query: 293 MLRSYQHEDEERARLWKEHTRKY 315
+ E R L KE R++
Sbjct: 234 L-------KEMRKNLTKEAIREH 249
>gi|301619923|ref|XP_002939342.1| PREDICTED: hypothetical protein LOC100497807 [Xenopus (Silurana)
tropicalis]
Length = 392
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 195 EVVREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRA 253
E VR ALS V + +E D +V + A +E +F + +D YK KYR+
Sbjct: 227 ENVRTTTVQALSDVLLKRVKEAPDLDVQEETLLNAAKNIEQEIFALFYHTDARYKKKYRS 286
Query: 254 VLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+L NLKDP N R+++ G++ P+ + +++ EMA DE+
Sbjct: 287 ILFNLKDPNNKVLFRRLVLGEITPQHLASLSSTEMAGDEL 326
>gi|395526680|ref|XP_003765486.1| PREDICTED: uncharacterized protein LOC100925432 [Sarcophilus
harrisii]
Length = 1362
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRA 253
E VR V D+L +V + +E + ++VR +A +E+A+F+ +D YK KYR+
Sbjct: 766 EQVRSAVADSLREVLLKRLQEPANLTVGEEAVRGIAANIEAAIFDLMQCTDYRYKTKYRS 825
Query: 254 VLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR------SYQHEDEERARL 307
++ NL+DP+N D +V+ G + P+ +V M+A E+AS E+ + S E A L
Sbjct: 826 LVFNLRDPRNKDLFLQVIRGDITPQGLVRMSATELASQELAQWRDRECSPVGPSEGSAPL 885
Query: 308 W 308
W
Sbjct: 886 W 886
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 230 IALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
I + ++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMA
Sbjct: 155 ILFQVPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMA 214
Query: 290 SDEMLRSYQHEDEERARLWKEHTRKY 315
SDE+ E R L +E R++
Sbjct: 215 SDEL-------KEMRKNLTREAIREH 233
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + + D++ ++ CD ++A +E + + +D Y+ + R+ +
Sbjct: 192 VRDKCVEMLS-AALKMDDDYKEYGVNCD--KMASEIEDHILSELKGTDMKYRNRVRSRIS 248
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDP+NP+ RR VL G + + MTA+EMASDE+
Sbjct: 249 NLKDPRNPNLRRNVLCGAISTSLIARMTAEEMASDEL 285
>gi|317418995|emb|CBN81033.1| Death-inducer obliterator 1 [Dicentrarchus labrax]
Length = 2389
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
N+ R+ +R + D L K ++D+ ++ + R+A+A+E MF +D YK
Sbjct: 658 NNQMRQNIRRSLTDILYKRVSDSDDL---KMTESEVGRLAVAIEKEMFNLCLSTDSKYKN 714
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
KYR+++ NLKDPKN +V+ G+V P +V ++A+E+ S E+
Sbjct: 715 KYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLSKEI 758
>gi|17136888|ref|NP_476967.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|442627872|ref|NP_001260457.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
gi|135660|sp|P20232.1|TFS2_DROME RecName: Full=Transcription elongation factor S-II; AltName:
Full=RNA polymerase II elongation factor DMS-II;
AltName: Full=TFIIS
gi|7921|emb|CAA37710.1| unnamed protein product [Drosophila melanogaster]
gi|6713129|gb|AAA92864.2| transcription elongation factor [Drosophila melanogaster]
gi|7298202|gb|AAF53436.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|15291997|gb|AAK93267.1| LD34766p [Drosophila melanogaster]
gi|220942248|gb|ACL83667.1| TfIIS-PA [synthetic construct]
gi|440213800|gb|AGB92992.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
Length = 313
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE A++ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +E
Sbjct: 180 MAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEE 239
Query: 288 MASDEM 293
MASDEM
Sbjct: 240 MASDEM 245
>gi|198419645|ref|XP_002120544.1| PREDICTED: similar to transcription elongation factor A (SII) 1
[Ciona intestinalis]
Length = 298
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 180 HKLSSSKIRCN-DCFREVVREKVCDALS--KVSGEADEEIRDEVNACDSVRVAIALESAM 236
H + +S ++ + R+ RE + L SG +D++ +A A+E A+
Sbjct: 123 HTMDTSSLQSTGNSVRDKCREMLVRGLQTDNTSGHSDQQC---------AFLAAAIEEAI 173
Query: 237 FEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ ++ + YK + R+ NLKD +N R VL G +KPE + MTA+EMASDEM
Sbjct: 174 YSEFKDTGVKYKNRIRSRFSNLKDTRNSILRLNVLNGILKPEQIAKMTAEEMASDEM 230
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASDE+
Sbjct: 165 IYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-- 222
Query: 296 SYQHEDEERARLWKEHTRKY 315
E R L KE R++
Sbjct: 223 -----KEMRKNLTKEAIREH 237
>gi|327276421|ref|XP_003222968.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 209
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E +++ +D YK + R+ + NLKD KNPD R+ VL G + PE + M
Sbjct: 68 DCEEMAAQIEEFIYQDVKNTDLKYKNRVRSHISNLKDSKNPDLRKNVLCGVITPEEIAVM 127
Query: 284 TAKEMASDEM 293
T++EMAS+E+
Sbjct: 128 TSEEMASNEL 137
>gi|392584823|gb|EIW74165.1| transcription elongation factor [Coniophora puteana RWD-64-598 SS2]
Length = 294
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ E + D L+ SG ++I + A A+E+A+F ++G + YK K
Sbjct: 133 DNTRDKCSELMYDGLASDSGAPSDQIASK---------AAAVETAVFNQFGSTSAEYKSK 183
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
R++ NLKD NP R ++ G + P M++ EMAS+E
Sbjct: 184 IRSLFVNLKDKNNPSLRETIVSGDLSPSKFATMSSSEMASEE 225
>gi|333361278|pdb|3NDQ|A Chain A, Structure Of Human Tfiis Domain Ii
Length = 108
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 48 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 107
Query: 292 E 292
E
Sbjct: 108 E 108
>gi|240972273|ref|XP_002400972.1| transcription factor S-II, putative [Ixodes scapularis]
gi|215490968|gb|EEC00609.1| transcription factor S-II, putative [Ixodes scapularis]
Length = 255
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 218 DEVNACDSVRVAIALESAMFE---KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
D + CD +A +E + ++G ++ YK + R+ + NLKD KNP+ R VL G
Sbjct: 109 DMPDGCDLDGLAAKIEEYILSWHCEFGDTNMKYKNRVRSRVSNLKDSKNPNLRLNVLHGA 168
Query: 275 VKPETVVGMTAKEMASDEM 293
+ P+ + MTA EMASDEM
Sbjct: 169 IDPDRIARMTADEMASDEM 187
>gi|47271475|ref|NP_653170.3| SPOC domain-containing protein 1 [Homo sapiens]
gi|74749560|sp|Q6ZMY3.1|SPOC1_HUMAN RecName: Full=SPOC domain-containing protein 1
gi|47077409|dbj|BAD18592.1| unnamed protein product [Homo sapiens]
Length = 1216
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V +A +E+A+++ ++G YK KYR++L
Sbjct: 608 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 667
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V P +V M++ ++A E+ R ++ ++E+R
Sbjct: 668 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR-WRDQEEKRG 716
>gi|397515906|ref|XP_003828182.1| PREDICTED: SPOC domain-containing protein 1 isoform 2 [Pan
paniscus]
Length = 1216
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V +A +E+A+++ ++G YK KYR++L
Sbjct: 608 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 667
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V P +V M++ ++A E+ R ++ ++E+R
Sbjct: 668 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR-WRDQEEKRG 716
>gi|397515904|ref|XP_003828181.1| PREDICTED: SPOC domain-containing protein 1 isoform 1 [Pan
paniscus]
Length = 1203
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V +A +E+A+++ ++G YK KYR++L
Sbjct: 608 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 667
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V P +V M++ ++A E+ R ++ ++E+R
Sbjct: 668 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR-WRDQEEKRG 716
>gi|332808286|ref|XP_003307989.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Pan troglodytes]
Length = 1204
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V +A +E+A+++ ++G YK KYR++L
Sbjct: 609 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 668
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V P +V M++ ++A E+ R ++ ++E+R
Sbjct: 669 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR-WRDQEEKRG 717
>gi|89365915|gb|AAI14431.1| SPOCD1 protein [Homo sapiens]
Length = 1203
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V +A +E+A+++ ++G YK KYR++L
Sbjct: 608 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 667
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V P +V M++ ++A E+ R ++ ++E+R
Sbjct: 668 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR-WRDQEEKRG 716
>gi|195338531|ref|XP_002035878.1| GM14545 [Drosophila sechellia]
gi|194129758|gb|EDW51801.1| GM14545 [Drosophila sechellia]
Length = 311
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE A++ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +E
Sbjct: 178 MAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLARMTPEE 237
Query: 288 MASDEM 293
MASDEM
Sbjct: 238 MASDEM 243
>gi|297821975|ref|XP_002878870.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
gi|297324709|gb|EFH55129.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+ +F+ +G + YK K R++L N KD NP R KV++G++ E + M+A+E
Sbjct: 300 LAFEIEAELFKLFGGVNKKYKEKGRSLLFNFKDKSNPKLREKVMYGEIAAERLCSMSAEE 359
Query: 288 MASDEMLRSYQHEDEERARL 307
+AS E+ Q + EE A++
Sbjct: 360 LASKELAEWRQAKAEEMAQM 379
>gi|125987179|ref|XP_001357352.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|195155927|ref|XP_002018852.1| GL25727 [Drosophila persimilis]
gi|54645683|gb|EAL34421.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|194115005|gb|EDW37048.1| GL25727 [Drosophila persimilis]
Length = 313
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE A++ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +E
Sbjct: 180 MAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEE 239
Query: 288 MASDEM 293
MASDEM
Sbjct: 240 MASDEM 245
>gi|357607939|gb|EHJ65747.1| transcription elongation factor S-II [Danaus plexippus]
Length = 292
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKI 249
D R RE + AL K+ GE NAC + +A LE ++ ++ +D YK
Sbjct: 129 DAVRLKCRELLTQAL-KIDGE-------NPNACATPEELAEDLEECIYAEFKNTDMRYKN 180
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ R+ + NLKDPKNP R L G + + MT +EMASDEM
Sbjct: 181 RVRSRVANLKDPKNPTLRTNFLNGVINAARLAKMTPEEMASDEM 224
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE A++ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +E
Sbjct: 182 MAAELEDAIYAEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEE 241
Query: 288 MASDEM 293
MASDEM
Sbjct: 242 MASDEM 247
>gi|194857365|ref|XP_001968937.1| GG24225 [Drosophila erecta]
gi|190660804|gb|EDV57996.1| GG24225 [Drosophila erecta]
Length = 313
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE A++ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +E
Sbjct: 180 MAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEE 239
Query: 288 MASDEM 293
MASDEM
Sbjct: 240 MASDEM 245
>gi|33988379|gb|AAH07910.2| SPOCD1 protein, partial [Homo sapiens]
Length = 342
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+++ ++G YK KYR++L NL+DP+N D KV+ G V P +V M++ +
Sbjct: 38 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 97
Query: 288 MASDEMLRSYQHEDEERA 305
+A E+ R ++ ++E+R
Sbjct: 98 LAPQELAR-WRDQEEKRG 114
>gi|281346348|gb|EFB21932.1| hypothetical protein PANDA_019839 [Ailuropoda melanoleuca]
Length = 264
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASDE+
Sbjct: 140 IYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-- 197
Query: 296 SYQHEDEERARLWKEHTRKY 315
E R L KE R++
Sbjct: 198 -----KEMRKNLTKEAIREH 212
>gi|30689925|ref|NP_197934.2| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|26449758|dbj|BAC42002.1| putative PHD finger protein [Arabidopsis thaliana]
gi|332006074|gb|AED93457.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 735
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E +F+ +G + YK K R++L NLKD NP+ R V+ G++ PE + M
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418
Query: 284 TAKEMASDEMLRSYQHEDEERARL 307
TA+E+AS E+ + Q + EE A +
Sbjct: 419 TAEELASKELSQWRQAKAEEMAEM 442
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 13/165 (7%)
Query: 135 DQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFR 194
D N SSSS + + E++NS D++ T ++ L ++ ++R
Sbjct: 84 DNNKGSSSS---LNPSAQEEDSNSKDSMPASEPPTPAESSTPPDLSSDAAPRLRRMSSSA 140
Query: 195 EV------VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYK 248
EV VR K + L+K + + E AC+ +A +E +++ ++ ++ YK
Sbjct: 141 EVDDTSDPVRIKCRELLTK-ALQTPPEKEGCAPACE---LAAGIEQSIYNEFKNTEMKYK 196
Query: 249 IKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ R+ + NL+D KNP R V++G + PE + MT++EMASD++
Sbjct: 197 TRVRSRVANLRDSKNPKLREGVMYGFIPPERMASMTSEEMASDDL 241
>gi|395856832|ref|XP_003800822.1| PREDICTED: SPOC domain-containing protein 1 [Otolemur garnettii]
Length = 1272
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
+R V A+ +V +E+ D V + V VA ++E+A+F+ ++ YK KYR++L
Sbjct: 677 IRGTVARAMQEVLWSRLQELPDLVLHEEVVESVAASIEAALFDLTQGTNCRYKTKYRSLL 736
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V P +V M++ ++A E+ R ++ ++E+R
Sbjct: 737 FNLRDPRNMDLFLKVVHGDVSPHDLVRMSSIQLAPQELAR-WRDQEEKRG 785
>gi|195115581|ref|XP_002002335.1| GI17330 [Drosophila mojavensis]
gi|193912910|gb|EDW11777.1| GI17330 [Drosophila mojavensis]
Length = 323
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE A++ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +E
Sbjct: 190 MAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEE 249
Query: 288 MASDEM 293
MASDEM
Sbjct: 250 MASDEM 255
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F + +D YK + R+ + NLKD KNPD R+ VL G + PE + M+ +E
Sbjct: 159 LAAQIEEVVFGEMQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEE 218
Query: 288 MASDEM 293
MAS+E+
Sbjct: 219 MASNEL 224
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F + +D YK + R+ + NLKD KNPD R+ VL G + PE + M+ +E
Sbjct: 159 LAAQIEEVVFGEMQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEE 218
Query: 288 MASDEM 293
MAS+E+
Sbjct: 219 MASNEL 224
>gi|441636142|ref|XP_003276474.2| PREDICTED: SPOC domain-containing protein 1 [Nomascus leucogenys]
Length = 1522
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+++ ++G YK KYR++L NL+DP+N D KV+ G V P +V M++ +
Sbjct: 945 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 1004
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYMQRM 319
+A E+ R ++ ++E+R E +K R+
Sbjct: 1005 LAPQELAR-WRDQEEKRGLKIIEQQQKEPCRL 1035
>gi|426222699|ref|XP_004005523.1| PREDICTED: SPOC domain-containing protein 1 [Ovis aries]
Length = 1255
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+F ++ YK KYR++L NL+DP+NP+ KV+ G + P +V M++ +
Sbjct: 696 IAAGIEAALFNLTQATNSRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 755
Query: 288 MASDEMLRSYQHEDEERA 305
+A E+ R ++ +E+R
Sbjct: 756 LAPQELAR-WRDREEKRG 772
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
++++ +D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASDE+
Sbjct: 228 IYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-- 285
Query: 296 SYQHEDEERARLWKEHTRKY 315
E R L KE R++
Sbjct: 286 -----KEMRKNLTKEAIREH 300
>gi|195475592|ref|XP_002090068.1| GE19417 [Drosophila yakuba]
gi|194176169|gb|EDW89780.1| GE19417 [Drosophila yakuba]
Length = 313
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE A++ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +E
Sbjct: 180 MAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEE 239
Query: 288 MASDEM 293
MASDEM
Sbjct: 240 MASDEM 245
>gi|119627992|gb|EAX07587.1| SPOC domain containing 1, isoform CRA_b [Homo sapiens]
Length = 644
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V +A +E+A+++ ++G YK KYR++L
Sbjct: 36 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 95
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V P +V M++ ++A E+ R ++ ++E+R
Sbjct: 96 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR-WRDQEEKRG 144
>gi|384246149|gb|EIE19640.1| hypothetical protein COCSUDRAFT_25684 [Coccomyxa subellipsoidea
C-169]
Length = 127
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
M + G + YK KYR+++ NLKD NPD RR+VL G++ + +V ++A+E+ASD
Sbjct: 1 MHRQNGGVNARYKAKYRSLIFNLKDANNPDLRRRVLSGEITGDVLVNLSAEELASD 56
>gi|47215864|emb|CAG02327.1| unnamed protein product [Tetraodon nigroviridis]
Length = 124
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 40/58 (68%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+++++ ++ YK + R+ + NLKD KNP+ RR VL G + P+ + M+A+EMAS E+
Sbjct: 1 IYQEFKSTEMKYKTRLRSRISNLKDHKNPELRRNVLCGNISPQRIASMSAEEMASAEL 58
>gi|119627993|gb|EAX07588.1| SPOC domain containing 1, isoform CRA_c [Homo sapiens]
Length = 626
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V +A +E+A+++ ++G YK KYR++L
Sbjct: 31 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 90
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V P +V M++ ++A E+ R ++ ++E+R
Sbjct: 91 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR-WRDQEEKRG 139
>gi|297665702|ref|XP_002811186.1| PREDICTED: SPOC domain-containing protein 1 [Pongo abelii]
Length = 1158
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+++ ++G YK KYR++L NL+DP+N D KV+ G V P +V M++ +
Sbjct: 595 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGAVTPYDLVRMSSMQ 654
Query: 288 MASDEMLRSYQHEDEERA 305
+A E+ R ++ ++E+R
Sbjct: 655 LAPQELAR-WRDQEEKRG 671
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDE 302
+D YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASDE+ E
Sbjct: 181 TDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDEL-------KE 233
Query: 303 ERARLWKEHTRKY 315
R L KE R++
Sbjct: 234 MRKNLTKEAIREH 246
>gi|42573473|ref|NP_974833.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|332006075|gb|AED93458.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 997
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F+ +G + YK K R++L NLKD NP+ R V+ G++ PE + MTA+E
Sbjct: 363 LASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTAEE 422
Query: 288 MASDEMLRSYQHEDEERARL 307
+AS E+ + Q + EE A +
Sbjct: 423 LASKELSQWRQAKAEEMAEM 442
>gi|195030242|ref|XP_001987977.1| GH10818 [Drosophila grimshawi]
gi|193903977|gb|EDW02844.1| GH10818 [Drosophila grimshawi]
Length = 350
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE A++ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +E
Sbjct: 217 MAAELEDAIYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEE 276
Query: 288 MASDEM 293
MASDEM
Sbjct: 277 MASDEM 282
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D ++ +E +++ +D YK + R+ + NLKD KNPD R+ VL G + PE + M
Sbjct: 228 DCEHLSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVM 287
Query: 284 TAKEMASDEM 293
T++EMAS+E+
Sbjct: 288 TSEEMASNEL 297
>gi|357139063|ref|XP_003571105.1| PREDICTED: uncharacterized protein LOC100836963 [Brachypodium
distachyon]
Length = 1244
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR----VAIALESAMFEKWGRSDGPYKIKYR 252
V E + ++ SK ADE D V++ ++ +A+ +E +F+ +G + YK + R
Sbjct: 316 VTESLAESGSKRMKSADEAAMD-VDSNSIIQKAESLALRIEEELFKLFGGVNKKYKERGR 374
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARL 307
++L NLKD NP+ R +VL G + PE + MTA+E+AS E+ + EE A++
Sbjct: 375 SLLFNLKDKSNPELRVRVLSGDIAPERLCSMTAEELASKELSEWRLAKAEEHAKM 429
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
++++ +D YK + ++ + NLKD KNP+ R+ VL G + P+ MTA+EMASDE+
Sbjct: 188 IYQEIRNTDMKYKNRIQSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-- 245
Query: 296 SYQHEDEERARLWKEHTRKY 315
E R L KE R++
Sbjct: 246 -----KEMRKNLTKEAIREH 260
>gi|326673092|ref|XP_686400.5| PREDICTED: hypothetical protein LOC553518 [Danio rerio]
Length = 1738
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 184 SSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRS 243
SSK R VR+ + + L K S E+D +I + A VA E +F +
Sbjct: 793 SSKKPSTGHIRRSVRDSLEEILLKRSKESDLKISSDRPA----EVARRTEKELFALFQGV 848
Query: 244 DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
D YK KYR++ NLKD KN ++VL G+V P +V MTA+E+AS E+
Sbjct: 849 DSKYKNKYRSLTFNLKDAKNNVLFKRVLKGEVSPADLVRMTAEELASKEL 898
>gi|21749290|dbj|BAC03567.1| unnamed protein product [Homo sapiens]
Length = 696
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V +A +E+A+++ ++G YK KYR++L
Sbjct: 101 VRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLL 160
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V P +V M++ ++A E+ R ++ ++E+R
Sbjct: 161 FNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQLAPQELAR-WRDQEEKRG 209
>gi|345324936|ref|XP_003430868.1| PREDICTED: transcription elongation factor A protein 3-like
[Ornithorhynchus anatinus]
Length = 281
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
++A +E ++++ +D Y+ + R+ + NL+DP+NP RR VL G + + MTA+
Sbjct: 147 QLASEIEDHIYQELKSTDMKYRNRVRSRISNLRDPRNPALRRSVLCGGIAASRIARMTAE 206
Query: 287 EMASDEM 293
EMASDE+
Sbjct: 207 EMASDEL 213
>gi|242060932|ref|XP_002451755.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
gi|241931586|gb|EES04731.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
Length = 1087
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F+ +G + YK K R++L NLKD NP+ R +VL G + PE + MTA+E
Sbjct: 341 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAEE 400
Query: 288 MASDEM 293
+AS E+
Sbjct: 401 LASKEL 406
>gi|116283511|gb|AAH29069.1| SPOCD1 protein [Homo sapiens]
Length = 266
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+++ ++G YK KYR++L NL+DP+N D KV+ G V P +V M++ +
Sbjct: 22 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 81
Query: 288 MASDEMLRSYQHEDEERA 305
+A E+ R ++ ++E+R
Sbjct: 82 LAPQELAR-WRDQEEKRG 98
>gi|218190291|gb|EEC72718.1| hypothetical protein OsI_06323 [Oryza sativa Indica Group]
Length = 907
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A+ +E +F+ +G + YK K R++L NLKD NP+ R +VL G + P+ + MTA+E
Sbjct: 22 LAVRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEE 81
Query: 288 MASDEM 293
+AS E+
Sbjct: 82 LASKEL 87
>gi|224143046|ref|XP_002324832.1| predicted protein [Populus trichocarpa]
gi|222866266|gb|EEF03397.1| predicted protein [Populus trichocarpa]
Length = 633
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 195 EVVREKVCDALSKVSGEA--DEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYR 252
E+ +K +A G+ DE + EV D +A +E+ +F+ +G + YK K R
Sbjct: 250 EIAEKKEIEAAQTPHGQEHIDEYVGKEV-VRDPRVLASEIEAELFKLFGGVNKKYKEKGR 308
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
++L NLKD NP+ R KV+ G++ P + MTA+E+AS E+
Sbjct: 309 SLLFNLKDRNNPELREKVMSGEIPPGRLCSMTAEELASKEL 349
>gi|115444961|ref|NP_001046260.1| Os02g0208600 [Oryza sativa Japonica Group]
gi|113535791|dbj|BAF08174.1| Os02g0208600, partial [Oryza sativa Japonica Group]
Length = 913
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A+ +E +F+ +G + YK K R++L NLKD NP+ R +VL G + P+ + MTA+E
Sbjct: 347 LAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEE 406
Query: 288 MASDEM 293
+AS E+
Sbjct: 407 LASKEL 412
>gi|356515496|ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808809 [Glycine max]
Length = 1143
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+ +F+ + + YK K R++L NLKD NP+ R +V+FG++ PE + MTA+E
Sbjct: 417 LASRIEAELFKLFQGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIPPEQLCSMTAEE 476
Query: 288 MASDEM 293
+AS E+
Sbjct: 477 LASKEL 482
>gi|212536338|ref|XP_002148325.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
gi|210070724|gb|EEA24814.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
Length = 296
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 229 AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
AIA+E+A F +G + YK K R++ NLK+ NP R++VL G V P+ V MT E
Sbjct: 164 AIAVEAAAFTSFGPETKEQYKTKIRSLFQNLKNKSNPQLRQRVLSGDVTPDKFVNMTHDE 223
Query: 288 MASDE 292
+ SDE
Sbjct: 224 LKSDE 228
>gi|222622404|gb|EEE56536.1| hypothetical protein OsJ_05842 [Oryza sativa Japonica Group]
Length = 614
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A+ +E +F+ +G + YK K R++L NLKD NP+ R +VL G + P+ + MTA+E
Sbjct: 22 LAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEE 81
Query: 288 MASDEM 293
+AS E+
Sbjct: 82 LASKEL 87
>gi|225430091|ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267937 [Vitis vinifera]
Length = 1146
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+ +F+ +G + YK K R++L NLKD NP+ R +V+ G++ PE + MTA+E
Sbjct: 408 LAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMTAEE 467
Query: 288 MASDEM 293
+AS E+
Sbjct: 468 LASKEL 473
>gi|444728032|gb|ELW68496.1| Zinc finger protein 436 [Tupaia chinensis]
Length = 763
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 224 DSVRVAIALESAMFEK-WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
D+ + A +L + + +D Y+ + R+ + NLKDP+NP RRKVL G + +
Sbjct: 137 DTAQCARSLAQRRYSRELSSTDMKYRNRVRSRISNLKDPRNPGLRRKVLSGAIAAGLIAK 196
Query: 283 MTAKEMASDEM 293
MTA+EMASDE+
Sbjct: 197 MTAEEMASDEL 207
>gi|147841857|emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]
Length = 1059
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+ +F+ +G + YK K R++L NLKD NP+ R +V+ G++ PE + MTA+E
Sbjct: 408 LAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMTAEE 467
Query: 288 MASDEM 293
+AS E+
Sbjct: 468 LASKEL 473
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 223 CDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
C+S+ I E ++++ +D YK + R+ + NLKDPKNP R+ VL G ++ +
Sbjct: 484 CESMGAEI--EDHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGSIELRRIAT 541
Query: 283 MTAKEMASDEM 293
M+A+EMASDE+
Sbjct: 542 MSAEEMASDEL 552
>gi|49387896|dbj|BAD24999.1| PHD finger protein-like [Oryza sativa Japonica Group]
gi|49387908|dbj|BAD25008.1| PHD finger protein-like [Oryza sativa Japonica Group]
Length = 1119
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A+ +E +F+ +G + YK K R++L NLKD NP+ R +VL G + P+ + MTA+E
Sbjct: 347 LAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEE 406
Query: 288 MASDEM 293
+AS E+
Sbjct: 407 LASKEL 412
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 230 IALESAMFEKWGR--------SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVV 281
++L + + W R +D Y+ + R+ + NLKDP+NP RR VL G + +
Sbjct: 72 VSLAKVLIKNWKRLLAGELKGTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIA 131
Query: 282 GMTAKEMASDEM 293
MTA+EMASDE+
Sbjct: 132 KMTAEEMASDEL 143
>gi|242017625|ref|XP_002429288.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
gi|212514184|gb|EEB16550.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
Length = 289
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 218 DEVNACDS-VRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVK 276
D+V+ C S +A LE A+F ++ +D YK + R+ + NLKDPKNP+ R L G +
Sbjct: 145 DQVDGCGSPEDLAEELEEAIFNEFRNTDIKYKNRIRSRVANLKDPKNPNLRMNYLIGALP 204
Query: 277 PETVVGMTAKEMASDEM 293
+ MTA+E+ASDEM
Sbjct: 205 ASRLAVMTAEELASDEM 221
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 16/98 (16%)
Query: 224 DSVRV------AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKP 277
DSVR+ A AL + +D YK + R+ + NLKD KNP+ R+ VL G + P
Sbjct: 223 DSVRLKCREMLAAALRTGEIRN---TDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNISP 279
Query: 278 ETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
+ MTA+EMASDE+ E R L KE R++
Sbjct: 280 DLFARMTAEEMASDEL-------KEMRKNLTKEAIREH 310
>gi|296081928|emb|CBI20933.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+ +F+ +G + YK K R++L NLKD NP+ R +V+ G++ PE + MTA+E
Sbjct: 390 LAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMTAEE 449
Query: 288 MASDEM 293
+AS E+
Sbjct: 450 LASKEL 455
>gi|348510333|ref|XP_003442700.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Oreochromis niloticus]
Length = 2408
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 3/104 (2%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
N+ R+ +R + D L K ++D+ ++ + R+A A+E MF +D YK
Sbjct: 734 NNQMRQNIRRSLTDILYKRVCDSDDL---KMTESEVGRLAFAIEKEMFNLCLSTDSKYKN 790
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
KYR+++ NLKDPKN +V+ G+V P +V ++A+E+ S E+
Sbjct: 791 KYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLSKEI 834
>gi|195566922|ref|XP_002107024.1| GD17224 [Drosophila simulans]
gi|194204421|gb|EDX17997.1| GD17224 [Drosophila simulans]
Length = 141
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
A LE A++ + YK + R+ L NL+DPKNP R K L G + P+ + MT +EM
Sbjct: 12 AAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQELSRMTPEEM 71
Query: 289 ASDEM 293
ASD++
Sbjct: 72 ASDDL 76
>gi|432905920|ref|XP_004077476.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1575
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 182 LSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWG 241
L+S K + R VR+ + D L++ E+D I E + VA E +F +
Sbjct: 616 LASKKPVSVEAIRRSVRDSLKDILTQRLKESDLHISVE----RASEVAKKTERELFHLFK 671
Query: 242 RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHED 301
+D YK KYR+++ NLKD KN ++VL G++ P ++ M+ +E+AS E+ Q E+
Sbjct: 672 DTDHKYKNKYRSLIFNLKDTKNNVLFKRVLKGEISPANLIRMSPEELASKELAAWRQREN 731
Query: 302 EERARLWKEHTRKYMQR 318
+ ++ R+ +R
Sbjct: 732 RHTIEMIEKEQREVERR 748
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 15/111 (13%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAI---ALE-----------SAMFEKWGR 242
VR+K + LS + +AD++ +D CD + I LE +A ++
Sbjct: 168 VRDKCVEMLS-AALKADDDYKDYGVNCDKMASEIEDHILELCQGCGCLDRLAAPLQELKS 226
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+D Y+ + R+ + NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 227 TDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDEL 277
>gi|326931937|ref|XP_003212080.1| PREDICTED: death-inducer obliterator 1-like [Meleagris gallopavo]
Length = 2496
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 174 ASGIILHKLSSSKIRC--NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 231
ASG K+S+ I+ N R+ +R + + L K ++D+ + E + +VA+
Sbjct: 829 ASGSSQVKVSAVPIQSQPNSQIRQNIRRSLKEILWKRVNDSDDLVMTE---SEVGKVALN 885
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E MF + +D YK KYR+++ NLKDPKN +VL G++ +V M +E+ S
Sbjct: 886 IEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLHGEISLSKLVRMKPEELLSK 945
Query: 292 EM 293
E+
Sbjct: 946 EL 947
>gi|413936812|gb|AFW71363.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1082
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F+ +G + YK K R++L NLKD NP+ R +VL G + PE + MTA+E
Sbjct: 344 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIVPERLCSMTAEE 403
Query: 288 MASDEM 293
+AS E+
Sbjct: 404 LASKEL 409
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 234 SAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
S ++++ +D Y+ + R+ + NLKDP+NP RR VL G + + MTA+EMASDE+
Sbjct: 303 SHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLNGAISAGLIAKMTAEEMASDEL 362
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 182 LSSSKIRCNDCFREVVREKVCDALSKVSGEADE--EIRDEVNACDSVRVAIALESAMFEK 239
+S + N R+ +R + D L K ++D+ +EV R+A A+E MF
Sbjct: 646 MSPMRPPPNTQMRQNIRRSLTDILFKRVSDSDDLKMTENEVG-----RLAFAIEKEMFNL 700
Query: 240 WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+D YK KYR ++ +LKDPKN KV+ G V P +V + A+E+ S EM
Sbjct: 701 CLSTDSKYKNKYRTLMLHLKDPKNKGLFYKVMGGDVTPFRLVRLGAEELVSREM 754
>gi|431891278|gb|ELK02155.1| Zinc finger protein 436 [Pteropus alecto]
Length = 622
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
Y+ + R+ + NLKDP+NP RR VL G + E + MTA+EMASDE+
Sbjct: 3 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAELIAKMTAEEMASDEL 49
>gi|327268236|ref|XP_003218904.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Anolis carolinensis]
Length = 350
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 151 VETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSG 210
V+ + T D N G+SI+E G+ G I+ + + +C E + + S
Sbjct: 143 VQKDNTTQPDLGN-GSSISETGQQHGPIM----AVRGKCTQLLFEALTD---------SS 188
Query: 211 EADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKV 270
++EEI + A +E +F +D YK R+ + NLK+PKN + +
Sbjct: 189 TSNEEIAKHH------QTAEEIEQHIFALHAGNDRKYKNSIRSKVSNLKNPKNYHLKHSL 242
Query: 271 LFGQVKPETVVGMTAKEMASDEM 293
G + P+T GM+A EMA DE+
Sbjct: 243 HIGVLSPQTFAGMSAVEMAHDEL 265
>gi|255582730|ref|XP_002532142.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223528178|gb|EEF30241.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 1154
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
VA +E+ ++ +G + YK K R++L NLKD NP+ R +V+ G++ PE + MTA+E
Sbjct: 394 VASTIEAELYNLFGGVNKKYKEKGRSLLFNLKDRNNPELRARVMSGEIPPEKLCSMTAEE 453
Query: 288 MASDEM 293
+AS E+
Sbjct: 454 LASKEL 459
>gi|452821015|gb|EME28050.1| hypothetical protein Gasu_43890 [Galdieria sulphuraria]
Length = 707
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAV 254
E +REK + L+++ E E+ +++ + ++AI +E+A+FEK+ ++D Y + R++
Sbjct: 183 ENIREKAKNVLNQILLENLEDTGVDIDKTNISKIAIDIENALFEKYFKAD--YLEQLRSL 240
Query: 255 LGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NL+ +N D +R ++ + P + MTA E+AS M
Sbjct: 241 TFNLRGKRNLDLKRAIVMSDISPTRLAEMTADELASKSM 279
>gi|195355349|ref|XP_002044154.1| GM22558 [Drosophila sechellia]
gi|194129443|gb|EDW51486.1| GM22558 [Drosophila sechellia]
Length = 162
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
A LE A++ + YK + R+ L NL+DPKNP R K L G + P+ + MT +EM
Sbjct: 33 AAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQELSRMTPEEM 92
Query: 289 ASDEM 293
ASD++
Sbjct: 93 ASDDL 97
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A++++ +D YK + R+ + KD KNP+ R+ VL G + P+ MTA+EMASD
Sbjct: 189 IEEAIYQEIRNTDMKYKNRVRSRISVPKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 248
Query: 292 EMLRSYQHEDEERARLWKEHTRKY 315
E+ E R L KE R++
Sbjct: 249 EL-------KEMRKNLTKEAIREH 265
>gi|402853722|ref|XP_003891539.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Papio anubis]
Length = 1199
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V+ +A +E+A+++ ++G YK KYR++L
Sbjct: 604 VRGTVVRSMQEVLWTRLRELPDSVLSEEVVKGIAAGIEAALWDLTQGTNGRYKTKYRSLL 663
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V +V M++ ++A E+ R ++ ++E+R
Sbjct: 664 FNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQLAPQELAR-WRDQEEKRG 712
>gi|312382732|gb|EFR28086.1| hypothetical protein AND_04400 [Anopheles darlingi]
Length = 420
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R RE + +AL +V GE E + + + AI F ++ +D YK +
Sbjct: 169 DAVRLKCREMLANAL-RVDGEPPEGCQTPEELGEELEEAI------FVEFKNTDMRYKNR 221
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R+ + NLKDPKNP R + G + + + MT++EMASDEM
Sbjct: 222 IRSRVANLKDPKNPSLRSNFVSGALTAQRLAKMTSEEMASDEM 264
>gi|67968616|dbj|BAE00667.1| unnamed protein product [Macaca fascicularis]
Length = 117
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
YK + R+ + NLKD KNP+ R+ VL G + P+ MTA+EMASDE+ E R
Sbjct: 3 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-------KEMRKN 55
Query: 307 LWKEHTRKY 315
L KE R++
Sbjct: 56 LTKEAIREH 64
>gi|363741478|ref|XP_001234737.2| PREDICTED: death-inducer obliterator 1 [Gallus gallus]
Length = 2152
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 174 ASGIILHKLSSSKIRC--NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 231
ASG K+S+ I+ N R+ +R + + L K ++D+ + E + +VA+
Sbjct: 742 ASGSSQVKVSAIPIQSQPNSQIRQNIRRSLKEILWKRVNDSDDLVMTE---SEVGKVALN 798
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E MF + +D YK KYR+++ NLKDPKN +VL G++ +V M +E+ S
Sbjct: 799 IEKEMFNLFHVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLHGEISLSKLVRMKPEELLSK 858
Query: 292 EM 293
E+
Sbjct: 859 EL 860
>gi|260826962|ref|XP_002608434.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
gi|229293785|gb|EEN64444.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
Length = 130
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 40/57 (70%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEE 303
YK + R+ NLKDP+NP+ RR+++ G++ P+ + M+A+EMASDE+ + + EE
Sbjct: 12 YKNRVRSRAANLKDPRNPELRRRLIQGEITPQQMATMSAQEMASDEVKKFRRQVSEE 68
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 224 DSVR------VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKP 277
DSVR +A AL++ F+ ++ YK + R+ + NLKD KNP R KVL G V
Sbjct: 112 DSVREKCREMLANALKTDEFKN---TEMKYKTRVRSRIANLKDAKNPGLREKVLHGDVSA 168
Query: 278 ETVVGMTAKEMASDEM 293
E + MTA+EMAS EM
Sbjct: 169 EKMAKMTAEEMASPEM 184
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 224 DSVR------VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKP 277
DSVR +A AL++ F+ ++ YK + R+ + NLKD KNP R KVL G V
Sbjct: 361 DSVREKCREMLANALKTDEFKN---TEMKYKTRVRSRIANLKDAKNPGLREKVLHGDVSA 417
Query: 278 ETVVGMTAKEMASDEM 293
E + MTA+EMAS EM
Sbjct: 418 EKMAKMTAEEMASPEM 433
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YK + R+ + NLKD KNP+ RR VL G + P+ + MT++EMASDE+
Sbjct: 157 YKNRVRSRISNLKDAKNPELRRNVLCGAITPQQIAVMTSEEMASDEL 203
>gi|198432582|ref|XP_002121512.1| PREDICTED: similar to death inducer-obliterator 1 [Ciona
intestinalis]
Length = 1728
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYR 252
R V++ + LSK S E+ E++R ++ R+ +E ++ + +G ++ YK +YR
Sbjct: 772 IRHNVKKSILGILSKRSEES-EDLR--MHPSSITRLVDKIEDSLHKLFGETNVKYKNRYR 828
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHE 300
+++ NLKD +N RKV+ G V +V MTA++MAS ++ Q+E
Sbjct: 829 SIMFNLKDERNHGLWRKVIIGDVTTSELVQMTAEQMASKKLAEWRQNE 876
>gi|224092388|ref|XP_002309587.1| predicted protein [Populus trichocarpa]
gi|222855563|gb|EEE93110.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E+ +F+ +G + YK K R++L NLKD NP+ R KV+ G++ P + M
Sbjct: 390 DPQFLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRSNPELREKVMSGEITPGRLCSM 449
Query: 284 TAKEMASDEM 293
TA+E+AS E+
Sbjct: 450 TAEELASKEL 459
>gi|355745090|gb|EHH49715.1| hypothetical protein EGM_00425 [Macaca fascicularis]
Length = 1212
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V+ +A +E+A+++ ++G YK KYR++L
Sbjct: 604 VRGTVVHSMQEVLWTRLRELPDLVLSEEVVKGIAAGIEAALWDLTQGTNGRYKTKYRSLL 663
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V +V M++ ++A E+ R ++ ++E+R
Sbjct: 664 FNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQLAPQELAR-WRDQEEKRG 712
>gi|221061105|ref|XP_002262122.1| transcription factor [Plasmodium knowlesi strain H]
gi|193811272|emb|CAQ42000.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 407
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 35 IDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEK 94
ID L LN +I +L T++ + T+ +IQ A DL+ W+++ +++ +
Sbjct: 58 IDDLILLNDVEINKDILKQTKIGVTVNKFTKIKNDEIQSIAKDLVDKWKNIAIKE-KHSS 116
Query: 95 KGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQ----NSTSSSSNVVRSE- 149
+ K E V++ S C E + +KV+ ++ +T SSN +E
Sbjct: 117 SSGSKSAESLKKRKSELVERSDSHTCSEDYELKKIKVKNSNEYKSEQATIQSSNANHNEP 176
Query: 150 -------IVETEETNSADNVNVGNSITEEGEASGII-----LHKLS----SSKIRCNDCF 193
++ T+ NS DN+ + SI + S + L LS + K ND
Sbjct: 177 NNKTHDILLHTKHDNS-DNIQIKESIKNSYQFSELKHMNTDLKALSEWNYNGKFH-NDVL 234
Query: 194 REVVREKVCDALSKVSGEADEEI----RDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
R+ ++ + A ++G D + R ++N + L EK +S Y +
Sbjct: 235 RDKAKQFLFKAF--ITGSDDNLLYLIDRKKLNDI-IYNIENELHKIFIEK-KQSQKEYNM 290
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
+ +++ NL D KNP F K+ + P+ + M ++EMASDE
Sbjct: 291 QLKSIKFNLCDKKNPSFNEKIYAEYISPKIIATMNSQEMASDE 333
>gi|355557769|gb|EHH14549.1| hypothetical protein EGK_00493 [Macaca mulatta]
Length = 1212
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V+ +A +E+A+++ ++G YK KYR++L
Sbjct: 604 VRGTVVHSMQEVLWTRLRELPDLVLSEEVVKGIAAGIEAALWDLTQGTNGRYKTKYRSLL 663
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V +V M++ ++A E+ R ++ ++E+R
Sbjct: 664 FNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQLAPQELAR-WRDQEEKRG 712
>gi|118791506|ref|XP_319787.3| AGAP009035-PA [Anopheles gambiae str. PEST]
gi|116117634|gb|EAA14772.3| AGAP009035-PA [Anopheles gambiae str. PEST]
Length = 315
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDS-VRVAIALESAMFEKWGRSDGPYKI 249
D R RE + +AL +V GE E C + + LE A+F ++ +D YK
Sbjct: 152 DAVRLKCREMLANAL-RVDGEPPE-------GCQTPEELGEELEEAIFVEFKNTDMRYKN 203
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ R+ + NLKDPKNP R + G + + + MT++EMASDEM
Sbjct: 204 RVRSRVANLKDPKNPSLRANFVSGAITAQRLAKMTSEEMASDEM 247
>gi|241063664|ref|XP_002408196.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
gi|215492398|gb|EEC02039.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
Length = 1507
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
Query: 197 VREKVCDALSKVSGEADE--EIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAV 254
VR+ + D+LS +AD+ DEV R+A+ +E +F+ + + YK KYR++
Sbjct: 816 VRKVLRDSLSNRCKDADDISLSGDEVK-----RMAVRIEEELFKYFKDTGTKYKSKYRSL 870
Query: 255 LGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
+ N+KD +N RK+L G++ P+ +V MT +E+AS E+ + + E++ A
Sbjct: 871 VFNIKDTRNQGLFRKILKGKIAPDKLVRMTPEELASKELAKWRERENQHVA 921
>gi|383422683|gb|AFH34555.1| SPOC domain-containing protein 1 [Macaca mulatta]
Length = 1199
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V ++ +V E+ D V + + V+ +A +E+A+++ ++G YK KYR++L
Sbjct: 604 VRGTVVHSMQEVLWTRLRELPDLVLSEEVVKGIAAGIEAALWDLTQGTNGRYKTKYRSLL 663
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERA 305
NL+DP+N D KV+ G V +V M++ ++A E+ R ++ ++E+R
Sbjct: 664 FNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQLAPQELAR-WRDQEEKRG 712
>gi|170036779|ref|XP_001846239.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879682|gb|EDS43065.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 292
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
A+F + +D YK + R+ + NLKDPKNP R + G + E + MT +EMASDEM
Sbjct: 166 AIFAEIKNTDFRYKNRVRSRVANLKDPKNPSLRANFVSGAITAERLAKMTPEEMASDEM 224
>gi|290462619|gb|ADD24357.1| Transcription elongation factor S-II [Lepeophtheirus salmonis]
Length = 291
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 185 SKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRS 243
+ I D R RE + +AL + + + I C S +A +E A+F + +
Sbjct: 120 TNIATTDDVRLRCREMLTNALKGIGSDLPDGI------CKSPEELADLIEEAIFSNFKST 173
Query: 244 DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YK + R+ + NLKD KNP R VL G ++P MTA EMAS+E+
Sbjct: 174 SAKYKNQIRSRVFNLKDKKNPALRENVLTGIIEPSKFAVMTADEMASNEV 223
>gi|428183234|gb|EKX52092.1| hypothetical protein GUITHDRAFT_133829 [Guillardia theta CCMP2712]
Length = 390
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 132 QKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGII----LHKLSSSKI 187
+K S + S + V E E + + G+ + E S + H + +
Sbjct: 188 EKRGDQSVTESKDSVPMEFTEMSVEKGVKDGSTGSVMDESKTGSDLTGSSTAHAIRKYRH 247
Query: 188 RCNDCFREVVREKVCDALSK--VSGEADEEIRDEVNACDSVRVAIALESAMFEK--WGR- 242
+ R+++REK+CDAL + G D+ +A D+ AIA+E +M++ +G+
Sbjct: 248 PTRNAVRDLIREKLCDALQPHVLPG-------DKYSALDA---AIAIEHSMYQYRFFGKD 297
Query: 243 -SDGPYKIKYRAVLGNLKDPKNPDFRRKV 270
S+ YK + R++L NL+D KNPD RR+V
Sbjct: 298 ESNSRYKGRARSILFNLRDSKNPDLRRRV 326
>gi|194894439|ref|XP_001978066.1| GG17893 [Drosophila erecta]
gi|190649715|gb|EDV46993.1| GG17893 [Drosophila erecta]
Length = 162
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE A++ + YK + R+ L NL+DPKNP R K L G + E + MT +E
Sbjct: 32 MAAQLEEAIYVELKSCQVKYKNRIRSRLANLRDPKNPALREKFLLGLISVEQLARMTPEE 91
Query: 288 MASDEM 293
MASD++
Sbjct: 92 MASDDL 97
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+D YK + R+ + NLKD KNP+ ++ VL G + PE + MT++EMAS+E+
Sbjct: 166 TDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNEL 216
>gi|389743667|gb|EIM84851.1| transcription elongation factor [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 191 DCFREVVREK----VCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGP 246
D R+ R+K + DAL+ SG E I + A A E A+F + + G
Sbjct: 134 DVTRDKTRDKCIELLYDALAFDSGAPSELI---------FQRAKAAEDAVFHTFNGTTGD 184
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
YK K R+++ NLKD KNP R V+ G + + MT+++MAS+E
Sbjct: 185 YKTKIRSLVVNLKDKKNPGLRESVVSGDLPAAKLAKMTSQDMASEE 230
>gi|431894648|gb|ELK04448.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 269
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YK + R+ + NLKD KNP RR+VL G + P+ + MT++EMASDE+
Sbjct: 3 YKNRVRSRISNLKDAKNPGLRRQVLCGSITPQQIAVMTSEEMASDEL 49
>gi|302833984|ref|XP_002948555.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
gi|300266242|gb|EFJ50430.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
Length = 1482
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 183 SSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGR 242
S+ + +D R VRE++ AL + E E E D VA +E+ +++
Sbjct: 397 SAGSVGNDDEVRSKVREQLASALQRALDELKAEGYTEALP-DPAAVAADVETELYKLHDN 455
Query: 243 S-DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHED 301
S YK K+R++ NL+D NP+ R +VL G++ P +V + E+A E+ Q
Sbjct: 456 SVSKDYKAKFRSLSFNLRDNGNPELRARVLRGELPPPRLVTLGPAELARKELSEWRQKRQ 515
Query: 302 EERARL 307
EE A++
Sbjct: 516 EEAAKM 521
>gi|195453902|ref|XP_002073994.1| GK14401 [Drosophila willistoni]
gi|194170079|gb|EDW84980.1| GK14401 [Drosophila willistoni]
Length = 2012
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 77/139 (55%), Gaps = 13/139 (9%)
Query: 174 ASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDE----VNACDSVRVA 229
AS + S IR N R ++E++ L+++ EA E +D+ + + + + A
Sbjct: 1272 ASPVRAGSTKSEPIRVN--VRRTLKEQL---LARIK-EAQEANKDKAIKWLTSLEVEQFA 1325
Query: 230 IALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
++ES M+ +GR G YK KYR+++ N+KD KN K+ QV+P+ +V MT +++
Sbjct: 1326 KSVESEMYHSFGRDAGAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPEQL 1385
Query: 289 ASDEMLRSYQHEDEERARL 307
AS E+ + E+E R +L
Sbjct: 1386 ASQELAK--WREEENRHQL 1402
>gi|300120236|emb|CBK19790.2| unnamed protein product [Blastocystis hominis]
Length = 285
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
Y K R +L NL DPKNPD R ++ G+++PE + MT EMAS EM
Sbjct: 27 YNAKLRNILFNLSDPKNPDLRNRIFSGELEPERLPIMTNDEMASSEM 73
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
++++ +D YK + R+ + NLKDPKNP R+ VL G + + M+A+EMASDE+
Sbjct: 299 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEEMASDEL 356
>gi|384246623|gb|EIE20112.1| hypothetical protein COCSUDRAFT_67485 [Coccomyxa subellipsoidea
C-169]
Length = 1199
Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACD---SVRVAIALESAMFEKWGRSDGPYKI 249
FRE R ++ ++L++ A EE++ + + D VA +E+ MF+ +G + Y
Sbjct: 337 FREKQRREMKESLTR----ALEELKAKGHEGDLPAPDMVAQRIEATMFKHFGGVNKEYGA 392
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWK 309
+ R++ NL D NPDFR KVL G ++P ++ M +EMAS+ R+ + + R
Sbjct: 393 RNRSIQFNLADKSNPDFRAKVLRGDLEPAKLMTMHTQEMASELERRTVEARNANFGR--A 450
Query: 310 EHT 312
EH+
Sbjct: 451 EHS 453
>gi|291233503|ref|XP_002736692.1| PREDICTED: transcription elongation factor A 1-like [Saccoglossus
kowalevskii]
Length = 138
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 240 WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ ++ YK + R+ + NLKD +NP R++VL G + PE + MTA+EMASD +
Sbjct: 17 FTNTEAKYKTRVRSRVANLKDVRNPILRQQVLCGSIPPEKIANMTAEEMASDRL 70
>gi|189203175|ref|XP_001937923.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985022|gb|EDU50510.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 306
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 50/243 (20%)
Query: 50 LLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKI 109
LL ST++ + L +H +Q A++L+ WRD ++ + +K G+ + + A
Sbjct: 45 LLRSTRIGVTINRLRQHKDPAVQKLATELVSKWRDEVKKKQQPKKDGAVKVAANGGAASS 104
Query: 110 EKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSIT 169
+ S + S + ++ + + DNV
Sbjct: 105 PAPPASGTA-------------------SPAPSQAKKKHDVPADKRNHKTDNVK------ 139
Query: 170 EEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVA 229
++++ S+ R + C R + D L+ +S E + DE+ + VA
Sbjct: 140 ----------YQVTGSEAR-DACVRLMY-----DGLAYMS----EAMPDEI-----LLVA 174
Query: 230 IALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
+E+A + G + YK K R++ NLK NP R++VL G+V + V MT EM
Sbjct: 175 KQVEAAAYTNAGSVNDGYKAKMRSLFQNLKSKSNPALRKRVLTGEVPAKRFVTMTHDEMK 234
Query: 290 SDE 292
SDE
Sbjct: 235 SDE 237
>gi|449437376|ref|XP_004136468.1| PREDICTED: uncharacterized protein LOC101216628 [Cucumis sativus]
gi|449503562|ref|XP_004162064.1| PREDICTED: uncharacterized protein LOC101228635 [Cucumis sativus]
Length = 1124
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A+ +E +F+ + + YK K R++L NLKD NP+ R +V+ G++ PE + MTA+E
Sbjct: 372 LALKIEEELFKLFSGVNKKYKEKGRSLLFNLKDRNNPELRERVMSGEITPERLCSMTAEE 431
Query: 288 MASDEM 293
+AS E+
Sbjct: 432 LASKEL 437
>gi|170036777|ref|XP_001846238.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879681|gb|EDS43064.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 301
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
LE A+F ++ +D YK + R+ + NLKD KNP R + G + + + MT +EMASD
Sbjct: 172 LEEAIFSEFRNTDMKYKNRVRSRVANLKDLKNPSLRSNYINGAITAQRLAKMTPEEMASD 231
Query: 292 EM 293
EM
Sbjct: 232 EM 233
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A A+E+ +F + ++ Y+ K ++ + NL+D +NP+ + V+ G + PE M
Sbjct: 150 DPTNIAAAIENEIFMCFKDTNIKYRNKIKSKVMNLRDKRNPELCQLVIEGVITPERFAKM 209
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEH 311
TA+EMASDEM + + EE KEH
Sbjct: 210 TAEEMASDEMKKERKKITEE---AIKEH 234
>gi|330921683|ref|XP_003299524.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
gi|311326749|gb|EFQ92363.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
Length = 306
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 50/243 (20%)
Query: 50 LLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKI 109
LL ST++ + L +H +Q A++L+ WRD ++ + +K G+ + + A
Sbjct: 45 LLRSTRIGVTINRLRQHKDPAVQKLATELVSKWRDEVKKKQQPKKDGAVKVAANGGAASS 104
Query: 110 EKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSIT 169
+ S + S + ++ + + DNV
Sbjct: 105 PAPPASGTV-------------------SPAPSQAKKKHDVPADKRNHKTDNVK------ 139
Query: 170 EEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVA 229
++++ S+ R + C R + D L+ +S E + DE+ + VA
Sbjct: 140 ----------YQVTGSEAR-DACVRLMY-----DGLAYMS----EAMPDEI-----LLVA 174
Query: 230 IALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
+E+A + G + YK K R++ NLK NP R++VL G+V + V MT EM
Sbjct: 175 KQVEAAAYTNAGSVNDAYKAKMRSLFQNLKSKSNPALRKRVLIGEVPAKRFVVMTHDEMK 234
Query: 290 SDE 292
SDE
Sbjct: 235 SDE 237
>gi|194742650|ref|XP_001953814.1| GF17954 [Drosophila ananassae]
gi|190626851|gb|EDV42375.1| GF17954 [Drosophila ananassae]
Length = 1976
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 231 ALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
A+ES M+ +GR G YK KYR+++ N+KD KN K+ QV+P+ +V MTA+++A
Sbjct: 1299 AVESEMYHSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTAEQLA 1358
Query: 290 SDEMLRSYQHEDEERARL 307
S E+ + E+E R +L
Sbjct: 1359 SQELAK--WREEENRHQL 1374
>gi|115709498|ref|XP_797149.2| PREDICTED: uncharacterized protein LOC592539, partial
[Strongylocentrotus purpuratus]
Length = 403
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 21/111 (18%)
Query: 206 SKVSGEADEEIR---------------------DEVNACDSVRVAIALESAMFEKWGRSD 244
SK++G+A E +R V A D RV+ +E +++ + +
Sbjct: 285 SKLAGQASESVRVNVKRTLLDVLLTRVKKAPDVKNVTADDVKRVSKQVEFELYKLFNDTG 344
Query: 245 GPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
YK KYR ++ N+KD KN R +L G++ P +V M++ ++AS E+++
Sbjct: 345 AKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQELMK 395
>gi|242025624|ref|XP_002433224.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518765|gb|EEB20486.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 2246
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKW-GRSDGPYKIKYRAV 254
+RE V L++ +E +D E N ++I +E +F+ + + D YK KYR++
Sbjct: 1122 IRESVKKTLAETLKVRVQECKDMEYNEEHIDNLSIKIEEKLFKHFENKVDTKYKSKYRSL 1181
Query: 255 LGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRK 314
+ N+KDPKN +K++ + P+ +V ++ +E+AS E+ R + E++ + + K+ +
Sbjct: 1182 IFNIKDPKNETLYKKIVDNLISPKDLVKLSPEELASQELARWREKENQHQLEMIKKTELE 1241
Query: 315 YMQR 318
M +
Sbjct: 1242 LMTK 1245
>gi|451849746|gb|EMD63049.1| hypothetical protein COCSADRAFT_182336 [Cochliobolus sativus
ND90Pr]
Length = 306
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 57/267 (21%)
Query: 50 LLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKI 109
LL ST++ + L H +Q A++L+ WRD ++ +K G PAK+
Sbjct: 45 LLRSTRIGVTINRLRTHKDPAVQKLATELVAKWRDEVKKKQPPKKDG---------PAKV 95
Query: 110 EKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSIT 169
+ S SG S + S + + ++ + + D V
Sbjct: 96 ATSNGSASSPAPPPSGTA----------SPAPSQSKKKHDVPSDKRNHKTDKVK------ 139
Query: 170 EEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVA 229
++++ ++ R N C R + D L+ +S E + DE+ + +A
Sbjct: 140 ----------YQVTGNEARDN-CVRLMY-----DGLAFMS----EAMPDEI-----LNIA 174
Query: 230 IALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
+E+A + G + YK K R++ NLK+ NP R++VL G++ + V MT EM
Sbjct: 175 KHVEAAAYSNAGSVNDAYKGKMRSLFQNLKNKSNPQLRKRVLTGEITAKRFVVMTHDEMK 234
Query: 290 SDEMLRSYQHEDEERARLWKEHTRKYM 316
SD + + EDE +L KE+ + M
Sbjct: 235 SD----ARRAEDE---KLEKENMNQAM 254
>gi|443915704|gb|ELU37060.1| transcription factor s-II (TFIIS), central domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 377
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 30/264 (11%)
Query: 35 IDALDQLNKSDI-TCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
+ L QL +S + T LL T+ + L HP K+I D A +L+ W+ E +
Sbjct: 26 VTILKQLKQSVVATEELLRETKAGLAIGKLRSHPRKEIADLAKELVKKWK----EAVEAG 81
Query: 94 KK-----GSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRS 148
KK G+ + P P+ + + + I + ST+++S S
Sbjct: 82 KKVKAAGGTPSTPSTATPSGKPTPPPAATSQPTKPQPSPIDPPSRKQSVSTTAASTPTSS 141
Query: 149 EIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKV 208
+ T + ++ V + + E+ G D R+ E + DA++
Sbjct: 142 KPTPTLKQPQSNVVRTVKNDAVKIESKG--------------DKTRDKCMELLYDAMASD 187
Query: 209 SGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRR 268
SG R+ + RV A+E +++++ Y K R + NLKD KNP R
Sbjct: 188 SG-----ARESTHLIILKRV-YAIEYQVYKEFDGVTKEYSTKMRRLFNNLKDKKNPGLRE 241
Query: 269 KVLFGQVKPETVVGMTAKEMASDE 292
V+ G + E V MT +EMAS+E
Sbjct: 242 AVVSGDISAEKFVKMTPEEMASEE 265
>gi|307180955|gb|EFN68743.1| Transcription elongation factor A protein 1 [Camponotus floridanus]
Length = 311
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
++ ++ +D YK + R+ + NL+D KNP+ R L G + P + MTA+EMASDE+
Sbjct: 186 IYGEFKNTDNRYKNRVRSRIANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEI 243
>gi|114050769|ref|NP_001040406.1| transcription elongation factor S-II [Bombyx mori]
gi|95102774|gb|ABF51328.1| transcription elongation factor S-II [Bombyx mori]
Length = 288
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDS-VRVAIALESAMFEKWGRSDGPYKI 249
D R RE + AL K +GE NAC S +A LE ++ ++ +D YK
Sbjct: 125 DAVRLKCRELLTQAL-KAAGETS-------NACGSPEELAEELEECIYAEFKNTDMRYKN 176
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ R+ + NLKDPKNP R G + + MT +EMASDEM
Sbjct: 177 RVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEM 220
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 15/134 (11%)
Query: 183 SSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGR 242
S S+ + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 698 SPSQSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQV 754
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDE 302
+D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 755 TDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL--------- 805
Query: 303 ERARLWKEHTRKYM 316
+WKE K M
Sbjct: 806 ---SMWKEKPTKSM 816
>gi|340376666|ref|XP_003386853.1| PREDICTED: transcription elongation factor A protein 2-like
[Amphimedon queenslandica]
Length = 314
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 218 DEVNACDSVRV---AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+EVN D R+ + A+E +F ++ ++ YK + R+ + N+ D KNP ++K++ G+
Sbjct: 168 NEVNIEDDTRLYNLSAAIEDQIFSEFKDTNMKYKNRVRSRVSNIGDLKNPGLKQKIISGE 227
Query: 275 VKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
+ P + M+ +EMAS++M + Q +E R
Sbjct: 228 ISPARIAKMSTEEMASEDMKKLRQEYTKEAIR 259
>gi|410901489|ref|XP_003964228.1| PREDICTED: PHD finger protein 3-like [Takifugu rubripes]
Length = 1448
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAV 254
E +R V D+L ++ + +E ++ + VA +E +F +D YK KYR++
Sbjct: 654 EAIRRSVRDSLKEILIQRLKESNLSISVEKASDVAKKIERELFHLNKDTDNKYKNKYRSL 713
Query: 255 LGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ NLKD KN +KVL G++ P ++ M+ +E+AS E+
Sbjct: 714 MFNLKDTKNNVLYKKVLKGEISPGNLIRMSPEELASKEL 752
>gi|345566736|gb|EGX49678.1| hypothetical protein AOL_s00078g167 [Arthrobotrys oligospora ATCC
24927]
Length = 316
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 224 DSVRVAIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
D ++A E ++ G ++D Y+ K R++ NLKDPKNP R V+ G+++P +
Sbjct: 178 DVFKLAKDTEHNLYRNHGSKTDTAYRNKLRSLFFNLKDPKNPSLRNNVISGRIEPMRLAL 237
Query: 283 MTAKEMASDEMLRSYQHEDEE 303
M+++EMAS E R EDE+
Sbjct: 238 MSSEEMASAERKR----EDEK 254
>gi|297808571|ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
gi|297318006|gb|EFH48428.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E +F+ + + YK K R++L NLKD NP+ R V+ G++ PE + M
Sbjct: 353 DPELLASKIELELFKLFRGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 412
Query: 284 TAKEMASDEMLRSYQHEDEERARL 307
TA+E+AS E+ + Q + EE A +
Sbjct: 413 TAEELASKELSQWRQAKAEEMAEM 436
>gi|145351408|ref|XP_001420072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580305|gb|ABO98365.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 173
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 188 RCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPY 247
R ND R+ RE DAL+ + E V+A + +E++M KW Y
Sbjct: 3 RVNDAARDRTREIFADALALCVTDGKIE---SVDAKKLASIVDQIENSMTAKWPSGGKDY 59
Query: 248 KIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
K K R + NLKD KNPD R + G++ ++ ++ +E+ S+E
Sbjct: 60 KAKVRQLAFNLKDAKNPDLRTNLATGEISAGVLIDLSPEELGSNE 104
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R RE + +AL +V GE E + D + AI +E + +D YK +
Sbjct: 140 DAVRLKCREMLTNAL-RVDGEQPEGCQSPEELADELEEAIYVE------FKNTDMKYKNR 192
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R+ + NLKDPKNP R + G + + + MT +EMASDEM
Sbjct: 193 VRSRVANLKDPKNPSLRSNFVSGAITAQRLAKMTPEEMASDEM 235
>gi|291224586|ref|XP_002732285.1| PREDICTED: PHD finger protein 3-like [Saccoglossus kowalevskii]
Length = 1741
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
+V +E +F+ + + YK KYR ++ NLKD N R+VL G + P +VGMT++
Sbjct: 820 KVVNRIEHELFKLYQDTSSKYKAKYRTLMFNLKDVNNKGLFRRVLKGDISPSKLVGMTSE 879
Query: 287 EMASDEML 294
+MA E+
Sbjct: 880 QMACKELF 887
>gi|407929237|gb|EKG22072.1| Zinc finger TFIIS-type protein [Macrophomina phaseolina MS6]
Length = 302
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 228 VAIALESAMFEKW-GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
VA +E A + K+ + PYK + R++ NLK+ NP R++VL G+++PE V M+++
Sbjct: 168 VAREVELAAYNKYQPETSAPYKERMRSLFQNLKNKSNPGLRKRVLAGEIRPEKFVTMSSE 227
Query: 287 EMASDEMLRSYQHEDEERARLWKEHTRKYM 316
E+ S E E RL KE+ K M
Sbjct: 228 ELMSAE-------RRAEAERLEKENMNKAM 250
>gi|407261229|ref|XP_003086425.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 1090
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V A+ +V +E+ D D V +A +E A+F ++ YK KYR++L
Sbjct: 485 VRSTVVRAMQEVLWTRAQELPDLALREDEVEAIAEGIEEALFHLTQDTNLRYKNKYRSLL 544
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
NL+DP+N D KV V P +V M++ ++A E+ R ++ ++E + E +K
Sbjct: 545 FNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLAPKELSR-WRDQEERKGLDIIEQQQKE 603
Query: 316 MQRM 319
+ R+
Sbjct: 604 LYRL 607
>gi|156082914|ref|XP_001608941.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia bovis
T2Bo]
gi|154796191|gb|EDO05373.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia
bovis]
Length = 302
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW---GRSDGPYKIKYRA 253
+R+K L K E + D A R+A +E+ +F ++ + Y +K ++
Sbjct: 131 IRDKAIIYLFKSLLAGKENVYDHKKAG---RLAYDMEAGLFSRYLYNQNNQKDYTLKLKS 187
Query: 254 VLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
+ NLKDPKN F K+ G ++P +V M A EMAS+E
Sbjct: 188 IAFNLKDPKNSTFSDKIYNGDIEPRSVAIMEAAEMASEE 226
>gi|444707355|gb|ELW48637.1| SPOC domain-containing protein 1 [Tupaia chinensis]
Length = 694
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPE 278
+A +E+A+F+ + G YK KYR++L NL+DP+NPD KVL G V P
Sbjct: 133 IAAGVEAALFDLTQGTQGRYKAKYRSLLFNLRDPRNPDLFLKVLHGDVTPH 183
>gi|156541048|ref|XP_001600804.1| PREDICTED: transcription elongation factor S-II-like [Nasonia
vitripennis]
Length = 312
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F ++ +D Y+ + R+ + NL+D KNP R + G + P + MTA+EMASDE+
Sbjct: 187 IFGEFKNTDNKYRNRVRSRVANLRDSKNPTLRTNFIIGAITPGRLATMTAEEMASDEI 244
>gi|332023706|gb|EGI63930.1| Transcription elongation factor S-II [Acromyrmex echinatior]
Length = 288
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
++ ++ +D YK + R+ + NL+D KNP+ R L G + P + MTA+EMASDE+
Sbjct: 163 IYAEFKNTDSRYKNRVRSRVANLRDVKNPNLRTNFLVGAITPARLAVMTAEEMASDEI 220
>gi|326525977|dbj|BAJ93165.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
C+DAL +L + + +LV+TQ+ + L LT+HP IQ A+DL W+ + +E+ +
Sbjct: 35 CLDALRRLREFRVNTDVLVATQVGKRLRYLTKHPNSDIQAMAADLFGYWKKVVIEETGKK 94
Query: 94 KKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNST-----SSSSNVVRS 148
D A K DK + ++ S VK++K ++T SS S V+
Sbjct: 95 NGTPANGKSDNSAA---KADKPQPMKVEKNSVSAKVKIEKNSTSATVKTEKSSMSTSVKI 151
Query: 149 E-------IVETEETNSADNVNVGN-----SITEEGEASGIILH---KLSSSKIRCNDCF 193
E + +TE +S V V S T + + + + KL+S +RCND
Sbjct: 152 EKKDGSIKVEKTENNDSKVQVKVEKVSKEVSRTPDTKKQSSVPNGPPKLTSL-VRCNDAA 210
Query: 194 REVVREKVCDALSK 207
R+ RE + +A S+
Sbjct: 211 RDKYRELLVEASSR 224
>gi|195478903|ref|XP_002100690.1| GE17201 [Drosophila yakuba]
gi|194188214|gb|EDX01798.1| GE17201 [Drosophila yakuba]
Length = 162
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A LE A++ + YK + R+ L NL+DPKNP R K L G + E + MT +E
Sbjct: 32 MAAQLEEAIYVELKCCQVKYKNRIRSRLANLRDPKNPGLREKFLLGLIGVEKMARMTPEE 91
Query: 288 MASDEM 293
MASD++
Sbjct: 92 MASDDL 97
>gi|402853390|ref|XP_003891378.1| PREDICTED: transcription elongation factor A protein 3-like,
partial [Papio anubis]
Length = 280
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 187 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
NLKDP+NP RR VL G + + MTA
Sbjct: 244 NLKDPRNPGLRRNVLSGAISAGLIAKMTA 272
>gi|332807989|ref|XP_513192.3| PREDICTED: transcription elongation factor A protein 3, partial
[Pan troglodytes]
Length = 295
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR+K + LS + +AD++ +D CD ++A +E ++++ +D Y+ + R+ +
Sbjct: 187 VRDKCVEMLS-AALKADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYRNRVRSRIS 243
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
NLKDP+NP RR VL G + + MTA
Sbjct: 244 NLKDPRNPGLRRNVLSGAISAGLIAKMTA 272
>gi|168012823|ref|XP_001759101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689800|gb|EDQ76170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 90
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 252 RAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
R+++ N+KD N DFRR++L G++KPE VV MT +MAS++
Sbjct: 1 RSIMFNVKDDTNLDFRRRILLGRIKPEAVVSMTFSDMASEQ 41
>gi|413926158|gb|AFW66090.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1080
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F+ + + YK K R++L NLKD NP+ R +VL G + PE + MTA+E
Sbjct: 339 LAFRIEEELFKLFRGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAEE 398
Query: 288 MASDEM 293
+AS E+
Sbjct: 399 LASKEL 404
>gi|354472422|ref|XP_003498438.1| PREDICTED: SPOC domain-containing protein 1-like [Cricetulus
griseus]
Length = 971
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V + +V +E+ D + + +A +E+A+F ++ YK KYR++L
Sbjct: 356 VRSTVVRTMQEVLWTRVQELPDLPLRKEEVASIAEDIEAALFHLTQDTNLRYKTKYRSLL 415
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
NLKDP+N D KV V P+ +V M++ ++A E+ R ++ ++E R E +K
Sbjct: 416 FNLKDPRNSDLILKVAQCDVSPQDLVQMSSIQLAPKELSR-WRDQEERRGLDIIEQQQKE 474
Query: 316 MQRM 319
+ R+
Sbjct: 475 LYRL 478
>gi|449544753|gb|EMD35725.1| hypothetical protein CERSUDRAFT_115683 [Ceriporiopsis subvermispora
B]
Length = 306
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ E + DAL+ SG E+I + A A+ES + ++ ++ YK K
Sbjct: 145 DKTRDKCAELIYDALAFDSGAPSEQI---------LSRAKAIESTVLSQFNGTNAEYKAK 195
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
R++ NLKD NP R V+ G + + M+++EMAS+E
Sbjct: 196 IRSLFVNLKDKNNPSLRESVVAGDLPVQRFCKMSSQEMASEE 237
>gi|169602463|ref|XP_001794653.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
gi|111066873|gb|EAT87993.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D + VA +E+A + G + YK K R++ NLK+ NP R+ VL G+++P+ V M
Sbjct: 164 DIITVAKHVEAAAYGNAGSVNDAYKQKMRSLFQNLKNKSNPALRKDVLSGKIQPKKFVVM 223
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ EM SD S + EDE +L KE+ + M
Sbjct: 224 SHDEMKSD----SRRAEDE---KLEKENMNQAM 249
>gi|380804173|gb|AFE73962.1| death-inducer obliterator 1 isoform b, partial [Macaca mulatta]
Length = 243
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 28 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 84
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 85 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 139
>gi|390339426|ref|XP_780718.3| PREDICTED: uncharacterized protein LOC575208 [Strongylocentrotus
purpuratus]
Length = 2433
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%)
Query: 220 VNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPET 279
V A D RV+ +E +++ + + YK KYR ++ N+KD KN R +L G++ P
Sbjct: 1291 VTADDVKRVSKQVEFELYKLFNDTGAKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRN 1350
Query: 280 VVGMTAKEMASDEMLR 295
+V M++ ++AS E+++
Sbjct: 1351 LVRMSSDQLASQELMK 1366
>gi|344306328|ref|XP_003421840.1| PREDICTED: death-inducer obliterator 1 [Loxodonta africana]
Length = 2247
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 166 NSITEEGEASGII-LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACD 224
+++ G + G L S + + N R+ +R + + L K ++D+ I E
Sbjct: 648 GAVSAPGTSPGPGRLGAASPAPSQPNSQIRQNIRRSLKEILWKRVSDSDDLIMTENEVG- 706
Query: 225 SVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
RVA+ +E MF + +D YK KYR+++ NLKDPKN +VL ++ +V M
Sbjct: 707 --RVALRIEKEMFSLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMK 764
Query: 285 AKEMASDEM 293
+E+AS E+
Sbjct: 765 PEELASKEL 773
>gi|432866827|ref|XP_004070955.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1340
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
+H SS + N R+ ++ + L K + ++ E++ + ++ +E+ MF+
Sbjct: 533 VHAPSSRPCQPNTQIRQSIQRSLTSILLKRICDCEDL---EMSESEVAKLVACIETEMFD 589
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
+ +D Y KYR ++ NLKDPKN +V+ G++ P +V M+ K+M
Sbjct: 590 IFRNTDSKYMNKYRTIMFNLKDPKNKGLLYRVVHGEIGPFRLVRMSQKDM 639
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 183 SSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGR 242
S S+ + N R+ +R + + L K ++D+ I E ++A+ +E MF +
Sbjct: 696 SPSQSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFNLFQV 752
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDE 302
+D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 753 TDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL--------- 803
Query: 303 ERARLWKEHTRKYM 316
WKE K M
Sbjct: 804 ---STWKEKPTKSM 814
>gi|383847731|ref|XP_003699506.1| PREDICTED: transcription elongation factor S-II-like isoform 1
[Megachile rotundata]
Length = 312
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
++ ++ +D YK + R+ + NL+D KNP+ R + G + P + MTA+EMASDE+
Sbjct: 187 IYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITPARLAVMTAEEMASDEI 244
>gi|344253671|gb|EGW09775.1| Transcription elongation factor A protein 1 [Cricetulus griseus]
Length = 278
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
++++ +D YK + R+ + KD KNP+ R+ VL G + P+ MTA+EMASDE+
Sbjct: 153 IYQEIRNTDMKYKNRVRSRISVPKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDEL-- 210
Query: 296 SYQHEDEERARLWKEHTRKY 315
E R L KE R++
Sbjct: 211 -----KEMRKNLTKEAIREH 225
>gi|383847733|ref|XP_003699507.1| PREDICTED: transcription elongation factor S-II-like isoform 2
[Megachile rotundata]
Length = 311
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
++ ++ +D YK + R+ + NL+D KNP+ R + G + P + MTA+EMASDE+
Sbjct: 186 IYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITPARLAVMTAEEMASDEI 243
>gi|225710958|gb|ACO11325.1| Transcription elongation factor S-II [Caligus rogercresseyi]
Length = 299
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E A+F + + YK + R+ + NL+D KNP R VL G + P MTA EMASD
Sbjct: 170 IEEAIFSNFKSTSAKYKNQIRSRVFNLRDKKNPALRENVLTGIIDPPKFAVMTADEMASD 229
Query: 292 EM 293
E+
Sbjct: 230 EI 231
>gi|195437119|ref|XP_002066492.1| GK18066 [Drosophila willistoni]
gi|194162577|gb|EDW77478.1| GK18066 [Drosophila willistoni]
Length = 319
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
++ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +EMASDEM
Sbjct: 194 IYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEM 251
>gi|189514890|ref|XP_001919157.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Danio rerio]
Length = 394
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 241 GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
GR+ YK R+ + NLK+P NP R+ ++ GQ+ P+ M+ +EMA +++ R
Sbjct: 257 GRNQHKYKFHIRSKVANLKNPNNPHLRQGLISGQLTPDAFAQMSVEEMAGEKLRR 311
>gi|154288118|ref|XP_001544854.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408495|gb|EDN04036.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 378
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 229 AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
AI +ESA + +G + Y+ K R++ NLK+ NPD R +VL ++ P+ V MT E
Sbjct: 240 AIQVESAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRMTHDE 299
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ SD + EE R+ KE+ K M
Sbjct: 300 LKSDA-------QREEERRIHKENMDKAM 321
>gi|170579780|ref|XP_001894980.1| transcription elongation factor S-II (TFIIS) [Brugia malayi]
gi|158598237|gb|EDP36172.1| transcription elongation factor S-II (TFIIS), putative [Brugia
malayi]
Length = 305
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 37/70 (52%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +AI E +FE + Y+ R+ + NL+D KN R VL G V PE M
Sbjct: 168 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 227
Query: 284 TAKEMASDEM 293
TA EMASDEM
Sbjct: 228 TADEMASDEM 237
>gi|384484057|gb|EIE76237.1| transcription elongation factor S-II [Rhizopus delemar RA 99-880]
Length = 304
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 226 VRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
++ A+A+E+ +F+++G + YK K R + NLK NP R V+ G++ E + M+
Sbjct: 169 LKRALAIETRIFDEYGSVNEGYKSKVRTLANNLKSKSNPGLRESVVSGELTIEKLCTMSV 228
Query: 286 KEMASDE 292
+EMAS+E
Sbjct: 229 EEMASEE 235
>gi|195385615|ref|XP_002051500.1| TfIIS [Drosophila virilis]
gi|194147957|gb|EDW63655.1| TfIIS [Drosophila virilis]
Length = 324
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
++ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +EMASDEM
Sbjct: 199 IYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEM 256
>gi|115400495|ref|XP_001215836.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191502|gb|EAU33202.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 885
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 156 TNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGE--AD 213
T +A V V + + G+++ + ++ + + R + ALS++ E +
Sbjct: 257 TATARPVPVKQEVIDHASPPGVVVEQAATGGVTSIEEISNPARSRAATALSRLFVEQITE 316
Query: 214 EEIRDEVNACDS-------VRVAIALESAMFEK----WGRSDGPYKIKYRAVLGNLKDPK 262
+ R N D ++A+A+E AM++ G YK++ R +L N+K K
Sbjct: 317 AQKRGPFNLPDGKTKEEVGQQIALAIEYAMYQNICGGAGEPTEAYKLQLRTILFNVK--K 374
Query: 263 NPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
N R ++L G + P+++ M++++MAS+E+
Sbjct: 375 NTSLRDRLLVGSLSPDSLSKMSSQDMASEEL 405
>gi|307192626|gb|EFN75800.1| Transcription elongation factor S-II [Harpegnathos saltator]
Length = 278
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
++ ++ +D YK + R+ + NL+D KNP+ R + G + P + MTA+EMASDE+
Sbjct: 153 IYAEFKNTDNRYKNRVRSRVANLRDVKNPNLRTNFIVGAITPARLAVMTAEEMASDEI 210
>gi|195579326|ref|XP_002079513.1| GD21972 [Drosophila simulans]
gi|194191522|gb|EDX05098.1| GD21972 [Drosophila simulans]
Length = 146
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 237 FEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +EMASDEM
Sbjct: 22 YSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEM 78
>gi|348507274|ref|XP_003441181.1| PREDICTED: hypothetical protein LOC100699272 [Oreochromis
niloticus]
Length = 1691
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 67/124 (54%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAV 254
E +R V D+L ++ + ++ ++ + +A +E +F + +D YK KYR++
Sbjct: 690 EAIRRSVRDSLKEILIQRLKDSDLNISVERASELAKKIERELFHLYKDTDNKYKNKYRSL 749
Query: 255 LGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRK 314
+ NLKD KN ++VL G++ P ++ M+ +E+AS E+ Q E+ + ++ R+
Sbjct: 750 MFNLKDTKNNILCKRVLKGEISPANLIRMSPEELASKELAAWRQRENRHTIEMIEKEQRE 809
Query: 315 YMQR 318
+R
Sbjct: 810 AERR 813
>gi|8050580|gb|AAF71710.1|AF220261_1 transcription elongation factor TFIIS [Drosophila virilis]
Length = 324
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
++ ++ +D YK + R+ + NLKDPKNP R + G V + + MT +EMASDEM
Sbjct: 199 IYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEM 256
>gi|115468770|ref|NP_001057984.1| Os06g0595900 [Oryza sativa Japonica Group]
gi|113596024|dbj|BAF19898.1| Os06g0595900, partial [Oryza sativa Japonica Group]
Length = 630
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F G + YK K R++L NLKD NP R +VL G + P+ + MT +E
Sbjct: 80 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 139
Query: 288 MASDEM 293
+AS E+
Sbjct: 140 LASKEL 145
>gi|238501684|ref|XP_002382076.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
gi|220692313|gb|EED48660.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
Length = 924
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
++A+++E+AM+E + G + YK + R +L N+K KNP R ++L G + P+T+
Sbjct: 378 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 435
Query: 283 MTAKEMASDEM 293
M++++MAS+E+
Sbjct: 436 MSSQDMASEEL 446
>gi|195391634|ref|XP_002054465.1| GJ24469 [Drosophila virilis]
gi|194152551|gb|EDW67985.1| GJ24469 [Drosophila virilis]
Length = 2055
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 187 IRCNDCFREVVREKVCDALSKV-SGEADEEIRDEVNACDSVRVAIALESAMFEKWGRS-D 244
IR N R ++E++ + + + E E D + A + +ES M+ +GR
Sbjct: 1305 IRFN--VRRTLKEQLLSRIKEAQAAELPTEKSDWLTAAEVENFVKRVESEMYHSFGRDVS 1362
Query: 245 GPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEER 304
YK KYR+++ N+KD KN K+ QV+P+ +V MT E+AS E+ + E+E R
Sbjct: 1363 AKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELASQELAK--WREEENR 1420
Query: 305 ARL 307
+L
Sbjct: 1421 HQL 1423
>gi|409041587|gb|EKM51072.1| hypothetical protein PHACADRAFT_263043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 303
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 172 GEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA 231
++ G+++ K++ D R+ E + DAL+ SG E+I + A A
Sbjct: 129 AKSDGVVIAKMT------GDATRDKCLELIYDALAFDSGAPSEQILGK---------AKA 173
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E+A G YK K R + NLKD NP R V+ G + MT+ EMAS+
Sbjct: 174 IEAAALTDNGGVTAAYKAKIRTLFVNLKDKNNPGLRESVVAGDLPVTRFCKMTSAEMASE 233
Query: 292 E 292
E
Sbjct: 234 E 234
>gi|195055893|ref|XP_001994847.1| GH13879 [Drosophila grimshawi]
gi|193892610|gb|EDV91476.1| GH13879 [Drosophila grimshawi]
Length = 2061
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 232 LESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMAS 290
+ES M+ +GR G YK KYR+++ N++D KN K+ QV+P+ +V MT E+AS
Sbjct: 1339 VESEMYHSFGRDVGAKYKSKYRSLIFNIRDRKNKTLFEKICAKQVEPKQLVRMTPSELAS 1398
Query: 291 DEMLRSYQHEDEERARL 307
E+ + E+E R +L
Sbjct: 1399 QELAK--WREEENRHQL 1413
>gi|119579238|gb|EAW58834.1| hCG1746234, isoform CRA_b [Homo sapiens]
Length = 241
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 233 ESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
E A+ + G + YK + ++ + NL D KNPD R+ G + P+ + MTA+EMASDE
Sbjct: 113 EEAIDPERGNTGMKYKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDE 172
Query: 293 MLRSYQHEDEERAR 306
+ +++ +E R
Sbjct: 173 LKEMHKNLRKEAIR 186
>gi|83766945|dbj|BAE57085.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 761
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
++A+++E+AM+E + G + YK + R +L N+K KNP R ++L G + P+T+
Sbjct: 291 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 348
Query: 283 MTAKEMASDEM 293
M++++MAS+E+
Sbjct: 349 MSSQDMASEEL 359
>gi|28204843|gb|AAH44755.1| Dido1 protein [Mus musculus]
Length = 643
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 113 LGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 169
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 170 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 224
>gi|391863799|gb|EIT73098.1| putative transcription factor [Aspergillus oryzae 3.042]
Length = 903
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
++A+++E+AM+E + G + YK + R +L N+K KNP R ++L G + P+T+
Sbjct: 357 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 414
Query: 283 MTAKEMASDEM 293
M++++MAS+E+
Sbjct: 415 MSSQDMASEEL 425
>gi|159124350|gb|EDP49468.1| PHD finger domain protein, putative [Aspergillus fumigatus A1163]
Length = 885
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
++ ++E AM++ G PYK++ R +L N+K KNP R ++L G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 283 MTAKEMASDEMLR 295
M++++MAS+E+L+
Sbjct: 383 MSSQDMASEELLQ 395
>gi|317142778|ref|XP_001819087.2| PHD finger domain protein [Aspergillus oryzae RIB40]
Length = 896
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
++A+++E+AM+E + G + YK + R +L N+K KNP R ++L G + P+T+
Sbjct: 350 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 407
Query: 283 MTAKEMASDEM 293
M++++MAS+E+
Sbjct: 408 MSSQDMASEEL 418
>gi|313225202|emb|CBY20996.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 217 RDEVNACDSVRVAIALESAMFEKWGRS--DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+D+ N +A +E A++ G S D Y+ K R+ NLKD KNPD R V+ G
Sbjct: 149 KDKFNPQFVSLMAAKIEEAIYNFHGNSSSDTKYRNKIRSRYSNLKDAKNPDLRDSVMTGV 208
Query: 275 VKPETVVGMTAKEMASDEM 293
+ P+ + M +EMAS ++
Sbjct: 209 ISPDKLASMKPEEMASKQL 227
>gi|156040461|ref|XP_001587217.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum
1980]
gi|154696303|gb|EDN96041.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum 1980
UF-70]
Length = 301
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
A+A+E A F+ +G YK K R++ NLK N R++V+ G ++P V MT +E+
Sbjct: 169 AMAVEQAAFDHFGGETKDYKEKLRSLFQNLKQVSNTQLRKRVMSGDIEPARFVVMTHEEL 228
Query: 289 ASDEM 293
S+EM
Sbjct: 229 KSEEM 233
>gi|393904020|gb|EJD73631.1| transcription elongation factor S-II [Loa loa]
Length = 310
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 37/70 (52%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A+ E +FE + Y+ R+ + NL+D KN R VL G V PE M
Sbjct: 173 DPEELAVRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 232
Query: 284 TAKEMASDEM 293
TA EMASDEM
Sbjct: 233 TADEMASDEM 242
>gi|70991879|ref|XP_750788.1| PHD finger domain protein [Aspergillus fumigatus Af293]
gi|66848421|gb|EAL88750.1| PHD finger domain protein, putative [Aspergillus fumigatus Af293]
Length = 884
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
++ ++E AM++ G PYK++ R +L N+K KNP R ++L G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 283 MTAKEMASDEMLR 295
M++++MAS+E+L+
Sbjct: 383 MSSQDMASEELLQ 395
>gi|225719828|gb|ACO15760.1| Transcription elongation factor A protein 1 [Caligus clemensi]
Length = 296
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 185 SKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRS 243
+ I D R RE + +AL K +G+ + I C S +A +E ++F +
Sbjct: 126 ANINTTDDVRLRCREMITNAL-KGAGDLPDGI------CKSPEELADLIEESIFSSNKST 178
Query: 244 DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YK + R+ + NL+D KNP R VL G ++P MTA EMASDE+
Sbjct: 179 SAKYKNQIRSRVFNLRDKKNPALRENVLTGIIEPSKFAVMTADEMASDEV 228
>gi|125597753|gb|EAZ37533.1| hypothetical protein OsJ_21863 [Oryza sativa Japonica Group]
Length = 1136
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F G + YK K R++L NLKD NP R +VL G + P+ + MT +E
Sbjct: 323 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 382
Query: 288 MASDEM 293
+AS E+
Sbjct: 383 LASKEL 388
>gi|363755550|ref|XP_003647990.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892026|gb|AET41173.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
Length = 306
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW--GRSDGPY 247
ND R++V + DAL+K S + I + +AI +E M++ +D Y
Sbjct: 142 NDKLRDMVIKAFYDALAKQSEHPPQSI---------LAIAIDIEKHMYKLKIPAENDKGY 192
Query: 248 KIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
K KYR + N+ NPD + K+ G + P+ +V KE+A + +
Sbjct: 193 KDKYRVIYSNVISKNNPDLKHKITNGDISPDYLVNCDPKELAPEHL 238
>gi|354481959|ref|XP_003503168.1| PREDICTED: death-inducer obliterator 1 [Cricetulus griseus]
Length = 2263
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +SS+ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 656 LGPVSSAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 712
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 713 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 767
>gi|312088616|ref|XP_003145930.1| hypothetical protein LOAG_10358 [Loa loa]
Length = 241
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 37/70 (52%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A+ E +FE + Y+ R+ + NL+D KN R VL G V PE M
Sbjct: 104 DPEELAVRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 163
Query: 284 TAKEMASDEM 293
TA EMASDEM
Sbjct: 164 TADEMASDEM 173
>gi|401395411|ref|XP_003879596.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
gi|325114003|emb|CBZ49561.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
Length = 418
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 107/264 (40%), Gaps = 31/264 (11%)
Query: 35 IDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEK 94
++AL L++ D+T LL T++ + L HP +I+ + L+ W+ +
Sbjct: 112 VEALTILDRVDMTRELLAKTRIGVSVGKLRTHPDVQIRSRCTQLVHKWKAGISGSCSTKD 171
Query: 95 KGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETE 154
G+ + PG + + ++ + + D+ SS V+ V+
Sbjct: 172 SGTLSRPGQNGSGQGKSHTGTSAND------------KATDKKHGLSSQPSVQGNGVQGV 219
Query: 155 ETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADE 214
+ A ++ G ASG D R+ R + AL V G
Sbjct: 220 PGDKAPEKISTSAEDYPGPASG--------------DAVRDRARGFLWRAL--VDGMQSG 263
Query: 215 EIRDEVNACDSVRVAIALESAMFEKW---GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVL 271
+ ++ RVA +E A+++++ +S Y ++ + + N D KNPD KVL
Sbjct: 264 RDLGADRSGETARVAAEIEKALWQEYCVKRKSTKEYNMQLKTLKWNFADQKNPDLNLKVL 323
Query: 272 FGQVKPETVVGMTAKEMASDEMLR 295
G PE + M + ++ASDE R
Sbjct: 324 CGVYTPEQLATMNSADLASDEKKR 347
>gi|242096284|ref|XP_002438632.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
gi|241916855|gb|EER89999.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
Length = 732
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A+ +E +F+ G YK K R++L NLKD NP R +VL G++ P+ + MT +E
Sbjct: 338 LALRIEEDLFQLCGGVSKKYKEKGRSLLFNLKDKSNPVLRGQVLSGEITPKCLCSMTTEE 397
Query: 288 MASDEM 293
+AS E+
Sbjct: 398 LASKEL 403
>gi|402588846|gb|EJW82779.1| hypothetical protein WUBG_06311 [Wuchereria bancrofti]
Length = 154
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 37/70 (52%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +AI E +FE + Y+ R+ + NL+D KN R VL G V PE M
Sbjct: 17 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 76
Query: 284 TAKEMASDEM 293
TA EMASDEM
Sbjct: 77 TADEMASDEM 86
>gi|363742332|ref|XP_003642622.1| PREDICTED: transcription elongation factor A protein 3-like [Gallus
gallus]
Length = 398
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
++A +E +F++ +D Y+ + R+ + NLKDPKNP+ RR VL G + P + MTA
Sbjct: 269 KMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPNLRRNVLCGAIAPALIARMTA 327
>gi|51571541|ref|NP_808520.2| death-inducer obliterator 1 isoform 2 [Mus musculus]
gi|187951163|gb|AAI38714.1| Death inducer-obliterator 1 [Mus musculus]
gi|187952021|gb|AAI38713.1| Death inducer-obliterator 1 [Mus musculus]
Length = 1183
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 653 LGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 709
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 710 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 764
>gi|37359898|dbj|BAC97927.1| mKIAA0333 protein [Mus musculus]
Length = 1201
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 671 LGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 727
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 728 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 782
>gi|313221451|emb|CBY32201.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 228 VAIALESAMFEKWGRS--DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
+A +E A++ G S D Y+ K R+ NLKD KNPD R V+ G + P+ + M
Sbjct: 160 MAAKIEEAIYNFHGNSSSDTKYRNKIRSRYSNLKDAKNPDLRDSVMTGVISPDKLASMKP 219
Query: 286 KEMASDEM 293
+EMAS ++
Sbjct: 220 EEMASKQL 227
>gi|119579237|gb|EAW58833.1| hCG1746234, isoform CRA_a [Homo sapiens]
Length = 160
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 233 ESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
E A+ + G + YK + ++ + NL D KNPD R+ G + P+ + MTA+EMASDE
Sbjct: 32 EEAIDPERGNTGMKYKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDE 91
Query: 293 MLRSYQHEDEERARLWKEHTRKY 315
+ +++ L KE R++
Sbjct: 92 LKEMHKN-------LRKEAIREH 107
>gi|154320754|ref|XP_001559693.1| transcription elongation factor S-II [Botryotinia fuckeliana
B05.10]
gi|347838992|emb|CCD53564.1| similar to transcription elongation factor s-ii [Botryotinia
fuckeliana]
Length = 301
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
A+A+E A F+ +G YK K R++ NLK N R++V+ G + P V MT +E+
Sbjct: 169 AMAVEQAAFDHFGGETKEYKEKLRSLFQNLKQVSNTQLRKRVMSGDIDPARFVVMTHEEL 228
Query: 289 ASDEM 293
S+EM
Sbjct: 229 KSEEM 233
>gi|255730739|ref|XP_002550294.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
gi|240132251|gb|EER31809.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
Length = 312
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 226 VRVAIALESAMFE-KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+++A +ES +F+ ++ R D Y+ K R+ NL++ KNP+ R ++L Q+ + MT
Sbjct: 176 LKIATEIESEVFKSQYSRVDDTYRNKLRSFTMNLRNKKNPELRERILTKQITAAAFIKMT 235
Query: 285 AKEMASDEM 293
KEMA + +
Sbjct: 236 PKEMAPEAL 244
>gi|170111316|ref|XP_001886862.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638220|gb|EDR02499.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ E + DAL+ SG E I ++ A A+E+++ YK K
Sbjct: 133 DSTRDKCTELIYDALASDSGAPVELI---------LKHAKAIEASVLADCDGVTAAYKSK 183
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
R++ NLKD NP R ++ G+++ E MT++EMAS+E
Sbjct: 184 IRSLFVNLKDKSNPSLRESIVSGELQAEKFTKMTSQEMASEE 225
>gi|302683244|ref|XP_003031303.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
gi|300104995|gb|EFI96400.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
Length = 286
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 223 CDSVRVAIA---LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPET 279
CDS +A +E+A++ + G ++ YK K R + NLK NP R +VL G+++P
Sbjct: 145 CDSNTIAEKARDVEAAVYNQNGCTNEAYKTKLRTLTANLKAKSNPGLRARVLKGELEPAR 204
Query: 280 VVGMTAKEMASDE 292
+ M+ +MAS+E
Sbjct: 205 LATMSVADMASEE 217
>gi|164661661|ref|XP_001731953.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
gi|159105854|gb|EDP44739.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
Length = 304
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 215 EIRDEVNACDSVRVAIALESAMFEKWGRS--DGPYKIKYRAVLGNLKDPKNPDFRRKVLF 272
E++D A+ +E A + K G S + Y+ K R++ NLKD NP+ R+KVL
Sbjct: 156 EVQDHAEPQTVFASAMKIEEAAYTKIGASTTNNDYRGKVRSLSLNLKDKNNPELRQKVLE 215
Query: 273 GQVKPETVVGMTAKEMASDEM 293
G + P +V M ++E+AS +
Sbjct: 216 GHIDPGMLVVMRSEELASKSL 236
>gi|403412176|emb|CCL98876.1| predicted protein [Fibroporia radiculosa]
Length = 348
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
D R+ E + DAL+ SG E+I A ++ES + ++ + G Y+
Sbjct: 148 GDKIRDKCVELIYDALASDSGAPSEQIMSR---------AKSIESTVLAEFSGTTGEYRS 198
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
K R NLKD NP R V+ G++ + M+++EMAS+E
Sbjct: 199 KIRTFFVNLKDKNNPGLRESVISGELPVQKFCRMSSQEMASEE 241
>gi|168050394|ref|XP_001777644.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670987|gb|EDQ57546.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1465
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 212 ADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKV 270
A E+++ ++ D R +A +E+ +F+ +G S Y K R++L NLKD NP+ R +V
Sbjct: 343 AVEDVKGGLHFMDQARKLATDIEAELFKLYG-SKKMYNQKARSLLFNLKDKSNPELRARV 401
Query: 271 LFGQVKPETVVGMTAKEMASDEM 293
G++ PE + M+ +++AS E+
Sbjct: 402 FSGEIPPEDLCRMSGEQLASKEL 424
>gi|134079343|emb|CAK96972.1| unnamed protein product [Aspergillus niger]
Length = 955
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 227 RVAIALESAMFEK----WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
+++++LESAM+E G PY+ + R ++ N+K KNP R ++L G + P+ +
Sbjct: 396 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 453
Query: 283 MTAKEMASDEM 293
M+ ++MAS+E+
Sbjct: 454 MSTQDMASEEL 464
>gi|321468633|gb|EFX79617.1| hypothetical protein DAPPUDRAFT_244816 [Daphnia pulex]
Length = 2274
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 194 REVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGP-YKIKYR 252
R + R + +AL EA++ DE +VA +E ++F + G YK KYR
Sbjct: 1709 RSISRSSLKEALWSRCKEANDVETDEAIV---EQVAKEIEESLFSLYKHDVGSKYKNKYR 1765
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+++ N+KDPKNP R+++ Q+ P+ +V M+ +++A+ ++
Sbjct: 1766 SLIFNIKDPKNPGLFREIITKQLLPDELVKMSTEDLANKDL 1806
>gi|327271898|ref|XP_003220724.1| PREDICTED: death-inducer obliterator 1-like [Anolis carolinensis]
Length = 2331
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 3/112 (2%)
Query: 182 LSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWG 241
+++S+ + N R+ +R + + L K ++D+ + E ++A+ +E MF +
Sbjct: 821 VNASQSQPNSQIRQNIRRSLKEILWKRVNDSDDLVMTESEVG---KIALNIEKEMFNLFH 877
Query: 242 RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+D YK KYR+++ NLKDPKN +VL + +V M +E+ S E+
Sbjct: 878 ATDNRYKSKYRSIMFNLKDPKNQGLFHRVLREDLPLSRLVRMKPEELLSKEL 929
>gi|260949205|ref|XP_002618899.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
gi|238846471|gb|EEQ35935.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
Length = 309
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 226 VRVAIALESAMFE-KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+R+A +ES +F+ ++ + Y+ + R NL++ KNP+ R ++L GQ+ P + + MT
Sbjct: 173 LRIATEIESEVFKSEYSNVNDNYRNRLRTFTMNLRNKKNPELRARLLSGQITPSSFIKMT 232
Query: 285 AKEMASDEM 293
EMA + +
Sbjct: 233 PNEMAPEAL 241
>gi|71000299|ref|XP_754844.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|66852481|gb|EAL92806.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|159127856|gb|EDP52971.1| transcription elongation factor S-II [Aspergillus fumigatus A1163]
Length = 304
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 220 VNACDSVRV----AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+N+ +S R A A+E+A F G + Y+ K R++ NLK+ NP R +VL +
Sbjct: 159 LNSTESPRAVLSKASAVEAAAFNALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNE 218
Query: 275 VKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
V PE V M+ E+ SDE + E+ R+ KE+ K M
Sbjct: 219 VTPEQFVKMSHDELKSDE-------QREQERRIQKENMDKAM 253
>gi|452001563|gb|EMD94022.1| hypothetical protein COCHEDRAFT_1201848 [Cochliobolus
heterostrophus C5]
Length = 306
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 57/267 (21%)
Query: 50 LLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKI 109
LL ST++ + L H +Q A++L+ WRD ++ +K G PAK+
Sbjct: 45 LLRSTRIGVTINRLRTHKDPAVQKLATELVAKWRDEVKKKQPPKKDG---------PAKV 95
Query: 110 EKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSIT 169
+ TS SG S + S + + ++ + + D V
Sbjct: 96 ATSNGSTSSPAPPPSGTA----------SPAPSQSKKKHDVPSDKRNHKTDKVK------ 139
Query: 170 EEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVA 229
++++ ++ R N C R + D L+ +S E + DE+ + +A
Sbjct: 140 ----------YQVTGNEARDN-CVRLMY-----DGLAFMS----EAMPDEI-----LNIA 174
Query: 230 IALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
+E+A + G + YK K R++ NLK+ NP R++VL G++ + V MT EM
Sbjct: 175 KHVEAAAYSNAGSVNDAYKGKMRSLFQNLKNKSNPQLRKRVLTGEITAKRFVVMTHDEMK 234
Query: 290 SDEMLRSYQHEDEERARLWKEHTRKYM 316
SD + + EDE +L KE+ + M
Sbjct: 235 SD----ARRAEDE---KLEKENMNQAM 254
>gi|350631410|gb|EHA19781.1| hypothetical protein ASPNIDRAFT_119842 [Aspergillus niger ATCC
1015]
Length = 891
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 227 RVAIALESAMFEK----WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
+++++LESAM+E G PY+ + R ++ N+K KNP R ++L G + P+ +
Sbjct: 332 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 389
Query: 283 MTAKEMASDEM 293
M+ ++MAS+E+
Sbjct: 390 MSTQDMASEEL 400
>gi|317032975|ref|XP_001394653.2| PHD finger domain protein [Aspergillus niger CBS 513.88]
Length = 903
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 227 RVAIALESAMFEK----WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
+++++LESAM+E G PY+ + R ++ N+K KNP R ++L G + P+ +
Sbjct: 344 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 401
Query: 283 MTAKEMASDEM 293
M+ ++MAS+E+
Sbjct: 402 MSTQDMASEEL 412
>gi|225560163|gb|EEH08445.1| transcription elongation factor S-II [Ajellomyces capsulatus
G186AR]
Length = 306
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 229 AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
AI +E A + +G + Y+ K R++ NLK+ NPD R +VL ++ P+ V MT E
Sbjct: 174 AIQVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRMTHDE 233
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ SD + EE R+ KE+ K M
Sbjct: 234 LKSDA-------QREEERRIHKENMDKAM 255
>gi|240278909|gb|EER42415.1| transcription elongation factor S-II [Ajellomyces capsulatus H143]
gi|325090170|gb|EGC43480.1| transcription elongation factor S-II [Ajellomyces capsulatus H88]
Length = 306
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 229 AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
AI +E A + +G + Y+ K R++ NLK+ NPD R +VL ++ P+ V MT E
Sbjct: 174 AIQVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRMTHDE 233
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ SD + EE R+ KE+ K M
Sbjct: 234 LKSDA-------QREEERRIHKENMDKAM 255
>gi|297807181|ref|XP_002871474.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
gi|297317311|gb|EFH47733.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E +++ +G + Y+ + R++L NLKD NPD R +V+ ++ E + M
Sbjct: 200 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPDLRERVMSEEISAERLCSM 259
Query: 284 TAKEMASDEMLRSYQHEDEERARL 307
TA+E+AS E+ + Q + EE A++
Sbjct: 260 TAEELASKELSQWRQAKAEEMAKM 283
>gi|441637983|ref|XP_004090096.1| PREDICTED: death-inducer obliterator 1 [Nomascus leucogenys]
Length = 1185
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ + E +VA+ +E MF
Sbjct: 652 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLLMTENEVG---KVALHIEKEMFN 708
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEML---- 294
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 709 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKE 768
Query: 295 RSYQHEDEERARLWKEHTRKYMQR 318
R + E RA+L E ++K + R
Sbjct: 769 RPARSVMESRAKLHNE-SKKTVPR 791
>gi|353234293|emb|CCA66319.1| related to transcription elongation factor TFIIS [Piriformospora
indica DSM 11827]
Length = 280
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGR--SDGPY 247
D R+ R + +AL SG E I ++ AIA+E A F G+ S+ Y
Sbjct: 116 GDKTRDSTRPLIYNALCIDSGAPSELI---------LKRAIAVEEAAFTICGKGESNSDY 166
Query: 248 KIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
+ K R++ NLK +NP R+ V+ G + E +V M++ +MAS+E
Sbjct: 167 RNKMRSLFLNLKGKENPSLRQGVVSGDISAEKLVTMSSSDMASEE 211
>gi|302796655|ref|XP_002980089.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
gi|302811590|ref|XP_002987484.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300144890|gb|EFJ11571.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300152316|gb|EFJ18959.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
Length = 58
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YK K R+++ NLKD NPD R +V G+V PE + MT +++AS E+
Sbjct: 2 YKEKARSLVFNLKDKNNPDLRARVFVGEVSPEQLCSMTIEQLASKEL 48
>gi|195500468|ref|XP_002097386.1| GE26190 [Drosophila yakuba]
gi|194183487|gb|EDW97098.1| GE26190 [Drosophila yakuba]
Length = 2001
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 231 ALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
++E MF +GR G YK KYR+++ N+KD KN K+ QV+P+ +V MT +++A
Sbjct: 1311 SVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTPEQLA 1370
Query: 290 SDEMLRSYQHEDEERARLWKE 310
S E+ + + E+ + + K+
Sbjct: 1371 SQELAKWREEENRHQLDMIKK 1391
>gi|67522641|ref|XP_659381.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|40744797|gb|EAA63953.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|259487122|tpe|CBF85543.1| TPA: PHD finger domain protein, putative (AFU_orthologue;
AFUA_6G09000) [Aspergillus nidulans FGSC A4]
Length = 889
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 14/95 (14%)
Query: 227 RVAIALESAMFEKWGRSDG-----PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVV 281
++ I++E A+++ G YKI+ RA+L N+K KNP R ++L G + P+ +
Sbjct: 323 QLGISVEEALYQNLMGGGGEATSEAYKIQLRAILFNVK--KNPSLRDRLLVGSLTPDALS 380
Query: 282 GMTAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
M+++EMAS+E+ Q +D A + +E R++M
Sbjct: 381 RMSSQEMASEEL----QQKD---AEIKREAERQHM 408
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 183 SSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGR 242
S ++ + N R+ +R + + L K ++D+ + E +VA+ +E MF +
Sbjct: 678 SPAQSQPNSQIRQNIRRSLKEILWKRVNDSDDLVMTESEVG---KVALNIEKEMFNLFQG 734
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 735 TDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLSKLVRMKPEELLSKEL 785
>gi|324513389|gb|ADY45503.1| Transcription elongation factor S-II [Ascaris suum]
Length = 301
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +AI +E +FE + Y+ R+ + NL+D KN R VL G V P M
Sbjct: 164 DPEELAIKIEKKLFEVHRGTGDKYRSAVRSRVFNLRDKKNAALRENVLTGVVTPAKFAVM 223
Query: 284 TAKEMASDEM 293
T++EMASDEM
Sbjct: 224 TSEEMASDEM 233
>gi|196008633|ref|XP_002114182.1| predicted protein [Trichoplax adhaerens]
gi|190583201|gb|EDV23272.1| predicted protein [Trichoplax adhaerens]
Length = 996
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VRE + A + + E+I +++ +++ +E +F + + YK KYR++
Sbjct: 503 VRENIYKAFRDILSKVAEKIAIQMSVVS--KLSKDIEEQLFNLFNDTGSRYKNKYRSLSF 560
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKD KN ++L G + P +V MT++E+A+ E+
Sbjct: 561 NLKDEKNKALVERILHGDISPSKLVRMTSEELANKEL 597
>gi|76096375|ref|NP_780760.2| death-inducer obliterator 1 isoform 3 [Mus musculus]
gi|152031593|sp|Q8C9B9.4|DIDO1_MOUSE RecName: Full=Death-inducer obliterator 1; Short=DIO-1; AltName:
Full=Death-associated transcription factor 1;
Short=DATF-1
Length = 2256
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 653 LGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 709
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 710 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 764
>gi|194901746|ref|XP_001980412.1| GG18883 [Drosophila erecta]
gi|190652115|gb|EDV49370.1| GG18883 [Drosophila erecta]
Length = 2004
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 231 ALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
++E MF +GR G YK KYR+++ N+KD KN K+ QV+P+ +V MT +++A
Sbjct: 1316 SVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTPEQLA 1375
Query: 290 SDEMLRSYQHEDEERARL 307
S E+ + E+E R +L
Sbjct: 1376 SQELAK--WREEENRHQL 1391
>gi|392339728|ref|XP_003753889.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
gi|392346978|ref|XP_003749689.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
Length = 2258
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 655 LGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 711
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 712 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 766
>gi|149034011|gb|EDL88794.1| death associated transcription factor 1 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 2099
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 496 LGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 552
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 553 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 607
>gi|148675399|gb|EDL07346.1| death inducer-obliterator 1, isoform CRA_a [Mus musculus]
Length = 2056
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 496 LGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 552
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 553 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 607
>gi|355683932|gb|AER97239.1| death inducer-obliterator 1 [Mustela putorius furo]
Length = 804
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
N R+ +R + + L K ++D+ I E + ++A+ +E MF + +D YK
Sbjct: 660 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE---SEVGKIALHIEKEMFNLFQVTDNRYKS 716
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+YR+++ NLKDPKN +VL ++ +V M +E+AS E+
Sbjct: 717 RYRSIMFNLKDPKNQGLFHRVLREEISSAKLVRMKPEELASKEL 760
>gi|148698211|gb|EDL30158.1| mCG52124 [Mus musculus]
Length = 216
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 218 DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKP 277
DEV A +A +E A+F ++ YK KYR++L NL+DP+N D KV V P
Sbjct: 28 DEVEA-----IAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVAHCDVTP 82
Query: 278 ETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKYMQRM 319
+V M++ ++A E+ R ++ ++E + E +K + R+
Sbjct: 83 NNLVQMSSIQLAPKELSR-WRDQEERKGLDIIEQQQKELYRL 123
>gi|58257648|dbj|BAA20791.2| KIAA0333 [Homo sapiens]
Length = 1223
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 690 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 746
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 747 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 801
>gi|209876019|ref|XP_002139452.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
gi|209555058|gb|EEA05103.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
Length = 322
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 58/229 (25%)
Query: 71 IQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDK----RTSEECQEISGV 126
I D A +LI W++ + ++ + S ++ P K+ K+D+ RT E+ ++IS
Sbjct: 72 IADMADNLIRKWKNSLALEGKERSQSSQKSDSESLPKKVAKIDESYGLRTPEK-EDISET 130
Query: 127 GIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSK 186
+KV+ NV NS T G +G
Sbjct: 131 ASIKVK------------------------------NVHNSYT--GPLTG---------- 148
Query: 187 IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW----GR 242
+ R+ R+ + A + E+ D C+ ++ +ESA+++++ G
Sbjct: 149 ----EPLRDKARQFLWKAFVMGVPVSQAELMDPSQVCE---ISAEVESALYKEYIIKQGN 201
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
S Y ++ + + NL D KNP+ K+ G++ P+ + M ++EMAS+
Sbjct: 202 SVRDYNLQLKTIKWNLGDLKNPELNSKLYIGKITPDEIATMHSREMASE 250
>gi|119595732|gb|EAW75326.1| death inducer-obliterator 1, isoform CRA_e [Homo sapiens]
Length = 1225
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 692 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 748
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 749 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 803
>gi|410227676|gb|JAA11057.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410263506|gb|JAA19719.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410304004|gb|JAA30602.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354255|gb|JAA43731.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 1189
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 656 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 712
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 713 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 767
>gi|383415435|gb|AFH30931.1| death-inducer obliterator 1 isoform b [Macaca mulatta]
Length = 1186
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 653 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 709
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 710 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 764
>gi|198450551|ref|XP_001358032.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
gi|198131086|gb|EAL27169.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
Length = 2182
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 231 ALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
++ES M+ +G G YK KYR+++ N+KD KN K+ QV+P+ +V MT +E+A
Sbjct: 1484 SVESEMYNSFGCDVGSKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELA 1543
Query: 290 SDEMLRSYQHE 300
S E+ + Q E
Sbjct: 1544 SQELAKWRQEE 1554
>gi|44971658|gb|AAS49898.1| death inducer-obliterator-2 [Homo sapiens]
Length = 1189
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 656 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 712
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 713 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 767
>gi|71044477|ref|NP_542987.2| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|301129172|ref|NP_001180299.1| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|168278571|dbj|BAG11165.1| death-inducer obliterator 1 [synthetic construct]
gi|223459792|gb|AAI37178.1| Death inducer-obliterator 1 [Homo sapiens]
Length = 1189
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 656 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 712
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 713 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 767
>gi|71023611|ref|XP_762035.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
gi|46101600|gb|EAK86833.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
Length = 315
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 9/188 (4%)
Query: 113 DKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEG 172
DK+ +++ + + V K S+++SS S T+ D GN
Sbjct: 66 DKKVADQAKSLVKDWKAIVDKQRAQSSANSSKAPSSTASPAPTTSKPDGTINGNGTASAS 125
Query: 173 EASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRV---A 229
AS S+S + + E++ +KV +A K+ ++ EI E + + ++ A
Sbjct: 126 PASTPSAAAKSTSSTKID---FEILNDKVRNACLKLLYQS-LEIGKESHVWNDSQIFDAA 181
Query: 230 IALESAMFEKWGRSD--GPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A+E+A+ G+ Y+ K R++ N+KD NPD R +V+ G + + +V MT +E
Sbjct: 182 VAVEAAILSNQGKGSVTADYRNKVRSLSLNIKDKNNPDLRVRVVEGDIAADKLVTMTNEE 241
Query: 288 MASDEMLR 295
+ASD+ R
Sbjct: 242 LASDKRKR 249
>gi|302658771|ref|XP_003021085.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
gi|291184964|gb|EFE40467.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
Length = 297
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 226 VRVAIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+R A +E+A F+ +G S Y+ K R++ NLK+ N R +VL +V PE V MT
Sbjct: 162 LRKAAEVEAAAFKAFGPESKEVYRTKMRSLFQNLKNTSNLSLRTRVLTNEVTPERFVNMT 221
Query: 285 AKEMASDEML---RSYQHEDEERA 305
+E+ SDE R Q E+ ++A
Sbjct: 222 HEELKSDERREEDRKIQKENMDKA 245
>gi|396472195|ref|XP_003839048.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
gi|312215617|emb|CBX95569.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
Length = 304
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A + G + YK K R++ NLK+ NP R++V G + + V MT E
Sbjct: 171 IAKQVEAAAYTNAGSINDAYKAKMRSLFQNLKNKTNPQLRKRVFSGDISAKRFVVMTHDE 230
Query: 288 MASDE 292
M SDE
Sbjct: 231 MKSDE 235
>gi|261338797|gb|ACX70080.1| UT01587p [Drosophila melanogaster]
Length = 1144
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 232 LESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMAS 290
+E MF +GR G YK KYR+++ N+KD KN K+ QV+P +V MT +++AS
Sbjct: 448 VELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 507
Query: 291 DEMLRSYQHEDEERARL 307
E+ + E+E R +L
Sbjct: 508 QELAK--WREEENRHQL 522
>gi|302842544|ref|XP_002952815.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
gi|300261855|gb|EFJ46065.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
Length = 233
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDE 302
+D YK R ++ +LK +N D RR+VL GQV+P+ +VGM +++A+ + + E
Sbjct: 102 TDQEYKAAARTLVASLK--RNADLRRRVLSGQVRPDELVGMGVRQLATPQ-------QQE 152
Query: 303 ERARLWKEHTRK 314
E ARL + TR+
Sbjct: 153 EYARLQERETRR 164
>gi|213406231|ref|XP_002173887.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
gi|212001934|gb|EEB07594.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
Length = 296
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 36/52 (69%)
Query: 241 GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
G++D Y+ K R++ NLKD +NP R++V+ G + P+ + M++ E+AS++
Sbjct: 176 GKTDSAYRNKMRSLYMNLKDKQNPQLRKRVISGAISPKRLSEMSSAELASED 227
>gi|91084035|ref|XP_966732.1| PREDICTED: similar to transcription elongation factor S-II
[Tribolium castaneum]
gi|270008004|gb|EFA04452.1| hypothetical protein TcasGA2_TC014756 [Tribolium castaneum]
Length = 294
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+F+++ +D YK + R+ + NLKD KNP+ R G + + MTA+EMA+DE+
Sbjct: 169 IFQEFKNTDMRYKNRVRSRIANLKDVKNPNLRTNFRIGAIPASRLAVMTAEEMANDEI 226
>gi|302507047|ref|XP_003015480.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
gi|291179052|gb|EFE34840.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
Length = 297
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 226 VRVAIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+R A +E+A F+ +G + Y+ K R++ NLK+ N R +VL +V PE V MT
Sbjct: 162 LRKATEVEAAAFKAFGPENKEVYRTKMRSLFQNLKNKSNLSLRTRVLTNEVTPERFVNMT 221
Query: 285 AKEMASDEML---RSYQHEDEERA 305
+E+ SDE R Q E+ ++A
Sbjct: 222 HEELKSDERREEDRKIQKENMDKA 245
>gi|407263151|ref|XP_003085477.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 843
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V A+ +V +E+ D D V +A +E A+F ++ YK KYR++L
Sbjct: 238 VRSTVVRAMQEVLWTRAQELPDLALREDEVEAIAEGIEEALFHLTQDTNLRYKNKYRSLL 297
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
NL+DP+N D KV V P +V M++ ++A E+ R ++ ++E + E +K
Sbjct: 298 FNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLAPKELSR-WRDQEERKGLDIIEQQQKE 356
Query: 316 MQRM 319
+ R+
Sbjct: 357 LYRL 360
>gi|195329544|ref|XP_002031470.1| GM24029 [Drosophila sechellia]
gi|194120413|gb|EDW42456.1| GM24029 [Drosophila sechellia]
Length = 2010
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 232 LESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMAS 290
+E MF +GR G YK KYR+++ N+KD KN K+ QV+P +V MT +++AS
Sbjct: 1318 VELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 1377
Query: 291 DEMLRSYQHEDEERARL 307
E+ + E+E R +L
Sbjct: 1378 QELAK--WREEENRHQL 1392
>gi|386765657|ref|NP_001247075.1| protein partner of snf, isoform B [Drosophila melanogaster]
gi|383292673|gb|AFH06393.1| protein partner of snf, isoform B [Drosophila melanogaster]
Length = 2018
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 232 LESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMAS 290
+E MF +GR G YK KYR+++ N+KD KN K+ QV+P +V MT +++AS
Sbjct: 1322 VELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 1381
Query: 291 DEMLRSYQHEDEERARL 307
E+ + E+E R +L
Sbjct: 1382 QELAK--WREEENRHQL 1396
>gi|119470088|ref|XP_001258016.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
gi|119406168|gb|EAW16119.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
Length = 884
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 10/84 (11%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
++ ++E AM++ G PYK++ R +L N+K KNP R ++L G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 283 MTAKEMASDEMLRSYQHEDEERAR 306
M++++MAS+E+ Q +D E R
Sbjct: 383 MSSQDMASEEL----QQKDAEIKR 402
>gi|426241849|ref|XP_004023383.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Ovis aries]
Length = 1927
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 606 LGPVSPASSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALLIEKEMFN 662
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQ 298
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 663 LFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL----- 717
Query: 299 HEDEERARLWKEHTRK 314
+W+E T K
Sbjct: 718 -------SVWRERTTK 726
>gi|24646283|ref|NP_650193.1| protein partner of snf, isoform A [Drosophila melanogaster]
gi|7299622|gb|AAF54807.1| protein partner of snf, isoform A [Drosophila melanogaster]
Length = 2016
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 232 LESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMAS 290
+E MF +GR G YK KYR+++ N+KD KN K+ QV+P +V MT +++AS
Sbjct: 1320 VELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 1379
Query: 291 DEMLRSYQHEDEERARL 307
E+ + E+E R +L
Sbjct: 1380 QELAK--WREEENRHQL 1394
>gi|401887634|gb|EJT51614.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 2479]
Length = 300
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 229 AIALESAMFEKWGRSDG-PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
AI +E F+ + G Y+ K R++ N+KD NP R +++ GQV P+ VV M+ +E
Sbjct: 178 AIGIEREAFKLLKFNSGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEE 237
Query: 288 MASDEM 293
MAS+ +
Sbjct: 238 MASESV 243
>gi|255083388|ref|XP_002504680.1| predicted protein [Micromonas sp. RCC299]
gi|226519948|gb|ACO65938.1| predicted protein [Micromonas sp. RCC299]
Length = 114
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
YK K R + NLKDPKNPD RR V G + P+ ++ + +E+ SDE
Sbjct: 1 YKAKVRQLSFNLKDPKNPDLRRSVADGLISPKVLLDLKPEELGSDE 46
>gi|297788910|ref|XP_002862485.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
gi|297308027|gb|EFH38743.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 255 LGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQH 299
+ NL+D NPD RR+VL G++ PE ++ ++A+EMASD+ + H
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNH 45
>gi|195166102|ref|XP_002023874.1| GL27309 [Drosophila persimilis]
gi|194106034|gb|EDW28077.1| GL27309 [Drosophila persimilis]
Length = 2185
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 231 ALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
++ES M+ +G G YK KYR+++ N+KD KN K+ QV+P+ +V MT +E+A
Sbjct: 1486 SVESEMYNSFGCDVGSKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELA 1545
Query: 290 SDEMLR 295
S E+ +
Sbjct: 1546 SQELAK 1551
>gi|47229319|emb|CAG04071.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3036
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 183 SSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGR 242
SS + N+ R+ +++ + L K G+ ++ E + V++ ++E MF +
Sbjct: 2102 SSRPSQPNNQIRQSIQKSLVSILVKRVGDCEDLKTSE---SEVVKLVASIEVEMFNIFRN 2158
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
+D Y KYR ++ NLKDP+N + G++ P +V MT K+M
Sbjct: 2159 TDSKYMNKYRTIMFNLKDPRNKGLLYGFVRGEISPFRLVRMTQKDM 2204
>gi|407264578|ref|XP_003945793.1| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 883
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V A+ +V +E+ D D V +A +E A+F ++ YK KYR++L
Sbjct: 278 VRSTVVRAMQEVLWTRAQELPDLALREDEVEAIAEGIEEALFHLTQDTNLRYKNKYRSLL 337
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKY 315
NL+DP+N D KV V P +V M++ ++A E+ R ++ ++E + E +K
Sbjct: 338 FNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLAPKELSR-WRDQEERKGLDIIEQQQKE 396
Query: 316 MQRM 319
+ R+
Sbjct: 397 LYRL 400
>gi|351714883|gb|EHB17802.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 2261
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 661 LGGTGSAQSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 717
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQ 298
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 718 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL----- 772
Query: 299 HEDEERARLWKEHTRK 314
+WKE K
Sbjct: 773 -------SMWKEKPTK 781
>gi|406699653|gb|EKD02852.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 8904]
Length = 317
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 229 AIALESAMFEKWGRSDG-PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
AI +E F+ + G Y+ K R++ N+KD NP R +++ GQV P+ VV M+ +E
Sbjct: 185 AIGIEREAFKLLKFNSGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEE 244
Query: 288 MASDEM 293
MAS+ +
Sbjct: 245 MASESV 250
>gi|344245025|gb|EGW01129.1| SPOC domain-containing protein 1 [Cricetulus griseus]
Length = 928
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+F ++ YK KYR++L NLKDP+N D KV V P+ +V M++ +
Sbjct: 387 IAEDIEAALFHLTQDTNLRYKTKYRSLLFNLKDPRNSDLILKVAQCDVSPQDLVQMSSIQ 446
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYMQRM 319
+A E+ R ++ ++E R E +K + R+
Sbjct: 447 LAPKELSR-WRDQEERRGLDIIEQQQKELYRL 477
>gi|443894971|dbj|GAC72317.1| transcription elongation factor TFIIS [Pseudozyma antarctica T-34]
Length = 321
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACDS--VRVAIALESAMFEKWGRSD--GPYKIK 250
E++++KV +A K+ +A E +++ DS A+A+E+A+ G+ Y+ K
Sbjct: 151 EILQDKVRNACLKLLYQALEIGKEQHGHSDSQVFDAAVAVEAAILANQGKGSVTADYRNK 210
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
R++ N+KD NPD R +V+ + + +V MT +E+ASD+ R
Sbjct: 211 VRSLSLNIKDKNNPDLRVRVVERDIAADKLVTMTNEELASDKRKR 255
>gi|159481668|ref|XP_001698900.1| hypothetical protein CHLREDRAFT_159323 [Chlamydomonas reinhardtii]
gi|158273392|gb|EDO99182.1| predicted protein [Chlamydomonas reinhardtii]
Length = 229
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 218 DEVNACDSVRVAIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVK 276
DE + D +A +E+A+F G GP YK R ++ +LK +N D R +V+ G V
Sbjct: 73 DEGDTPDVTGLAEDIEAALFHHHGSKPGPEYKAAARLLVASLK--RNADLRGQVVSGAVD 130
Query: 277 PETVVGMTAKEMASDEMLRSYQH 299
P +V M ++++A+ + + + H
Sbjct: 131 PAALVAMDSRQLATSQQQQEFAH 153
>gi|195110799|ref|XP_001999967.1| GI24826 [Drosophila mojavensis]
gi|193916561|gb|EDW15428.1| GI24826 [Drosophila mojavensis]
Length = 2080
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 232 LESAMFEKWGRS-DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMAS 290
+ES M+ +G+ YK KYR+++ N+KD KN K+ QV+P+ +V MT E+AS
Sbjct: 1366 VESEMYNSFGQDVSAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELAS 1425
Query: 291 DEMLRSYQHEDEERARL 307
E+ + E+E R +L
Sbjct: 1426 QELAK--WREEENRHQL 1440
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 185 SKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSD 244
S+ + N R+ +R + + L K ++D+ I E ++A+ +E +F + +D
Sbjct: 910 SQSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKELFNLFHVTD 966
Query: 245 GPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEER 304
YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 967 NRYKSKYRSIMFNLKDPKNQGLFHRVLREEIPLSKLVRMKPEELLSKEL----------- 1015
Query: 305 ARLWKEHTRKYMQ 317
+WKE K ++
Sbjct: 1016 -SVWKERPTKSVE 1027
>gi|259482276|tpe|CBF76603.1| TPA: transcription elongation factor S-II (AFU_orthologue;
AFUA_3G07670) [Aspergillus nidulans FGSC A4]
Length = 304
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 246 PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEML---RSYQHEDE 302
PY+ K R++ NLK+ NP R +VL +V PE V MT +E+ SDE R Q E+
Sbjct: 190 PYRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELRSDEQREKDRKIQKENM 249
Query: 303 ERA 305
++A
Sbjct: 250 DKA 252
>gi|294880257|ref|XP_002768947.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
gi|239871976|gb|EER01665.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
Length = 621
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 228 VAIALESAMFEKWGRS--DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
+A +E A+++K RS Y+ YR V NL DP+N RR+VL G++ P+ +V +
Sbjct: 349 LASNIEGALYDKHERSIKSKAYRAAYRMVNFNLSDPQNASLRRRVLTGEMSPQHLVTASH 408
Query: 286 KEMASDEM 293
E+ SD +
Sbjct: 409 DELGSDSL 416
>gi|169618205|ref|XP_001802516.1| hypothetical protein SNOG_12292 [Phaeosphaeria nodorum SN15]
gi|111058985|gb|EAT80105.1| hypothetical protein SNOG_12292 [Phaeosphaeria nodorum SN15]
Length = 896
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKWGR---SDGPYK 248
F E +R+ + + S I D E R+A L +A E +G D P
Sbjct: 313 FAEKLRDVLSPLIKTASDARGYRIPDGETATSLGARLAFQLNTAAVEHYGEPTAGDSPSS 372
Query: 249 IKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSY 297
I+ RA++ N K KNP ++L G +KP+ +V M +EMAS++ + +
Sbjct: 373 IRLRAIMFNAK--KNPILVDRLLSGSLKPQELVSMPTEEMASEDKQKEF 419
>gi|332030327|gb|EGI70070.1| Death-inducer obliterator 1 [Acromyrmex echinatior]
Length = 2282
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 15/119 (12%)
Query: 181 KLSSSKIRCNDCFREVVREKVCDALSKVSGEA------DEEIRDEVNACDSVRVAIALES 234
KL+ K + R +R+ + + LS E DEEI D +A +E
Sbjct: 1251 KLTPVKKPETEPIRVNIRKSLTELLSSRIKETKDLKLTDEEIAD---------LAFNIEF 1301
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
M++ + + YK KYR+++ N+KD KN RK+ + P+ VV ++ EMAS E+
Sbjct: 1302 EMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADHSLTPDAVVRLSPDEMASQEL 1360
>gi|308808340|ref|XP_003081480.1| putative elongation factor (ISS) [Ostreococcus tauri]
gi|116059943|emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri]
Length = 126
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
M KW YK K R + N++DPKNPD R + G++ + ++ +T +E+ S+E
Sbjct: 1 MTAKWPEGGKDYKAKVRQLAFNMRDPKNPDLRTNLAMGEISADVLIDLTPEELGSNE 57
>gi|40287878|gb|AAR84049.1| death inducer-obliterator-2 [Mus musculus]
Length = 1183
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D I E ++A+ +E MF
Sbjct: 653 LGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDYLIMTENEVG---KIALHIEKEMFN 709
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D +K KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 710 LFQVTDNRFKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 764
>gi|320039752|gb|EFW21686.1| hypothetical protein CPSG_01843 [Coccidioides posadasii str.
Silveira]
Length = 848
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 228 VAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
+ A+E AM++ G + PY+ + R +L N++ KNP R +L G++ P+ M
Sbjct: 318 LGFAIEQAMYQNLCGGSGEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKM 375
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEH 311
+ ++MAS+E+ Q +DE + ++H
Sbjct: 376 STQDMASEEL---RQRDDEIKREAERQH 400
>gi|322795023|gb|EFZ17875.1| hypothetical protein SINV_15581 [Solenopsis invicta]
Length = 695
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 15/119 (12%)
Query: 181 KLSSSKIRCNDCFREVVREKVCDALSKVSGEA------DEEIRDEVNACDSVRVAIALES 234
KL+ K + R +R+ + + LS E DEEI D +A +E
Sbjct: 125 KLTPVKKPETEPIRVNIRKTLTELLSSRIKETEDLKLTDEEIAD---------LAFNIEL 175
Query: 235 AMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
M++ + + YK KYR+++ N+KD KN RK+ + P+ VV ++ EMAS E+
Sbjct: 176 EMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQEL 234
>gi|297823711|ref|XP_002879738.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
gi|297325577|gb|EFH55997.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%)
Query: 255 LGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
+ NL+D NPD RR+VL G++ PE ++ ++A+EMASD+
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDK 38
>gi|348554091|ref|XP_003462859.1| PREDICTED: death-inducer obliterator 1 [Cavia porcellus]
Length = 2259
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 653 LGATGAAQSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 709
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEML---- 294
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 710 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWKE 769
Query: 295 RSYQHEDEERARLWKEHTRKYMQ 317
R + E R++L E + M+
Sbjct: 770 RPTKSVIESRSKLQNESKKTAMK 792
>gi|326472154|gb|EGD96163.1| transcription elongation factor S-II [Trichophyton tonsurans CBS
112818]
gi|326476985|gb|EGE00995.1| transcription elongation factor S-II [Trichophyton equinum CBS
127.97]
Length = 297
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 226 VRVAIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+R A +E+A F+ +G + Y+ K R++ NLK+ N R +VL +V PE V MT
Sbjct: 162 LRKATDVEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMT 221
Query: 285 AKEMASDEML---RSYQHEDEERA 305
+E+ SDE R Q E+ ++A
Sbjct: 222 HEELKSDERREEDRKIQKENMDKA 245
>gi|384495291|gb|EIE85782.1| hypothetical protein RO3G_10492 [Rhizopus delemar RA 99-880]
Length = 511
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 46/70 (65%), Gaps = 4/70 (5%)
Query: 228 VAIALESAMFEKWG---RSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
+A ++ES MF + G R+ G YK K+R++L NLKD N F+ +++ G + P ++ M
Sbjct: 126 LAKSIESTMFSQLGDRGRTCGEVYKNKFRSLLHNLKDKANQTFQLRIVTGDLSPLELIKM 185
Query: 284 TAKEMASDEM 293
++++MA+ E+
Sbjct: 186 SSEDMANPEL 195
>gi|355562965|gb|EHH19527.1| Death-inducer obliterator 1 [Macaca mulatta]
Length = 2238
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 653 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 709
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 710 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 764
>gi|109091362|ref|XP_001086709.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Macaca mulatta]
Length = 2238
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 653 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 709
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 710 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 764
>gi|303311679|ref|XP_003065851.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240105513|gb|EER23706.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 848
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 228 VAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
+ A+E AM++ G + PY+ + R +L N++ KNP R +L G++ P+ M
Sbjct: 318 LGFAIEQAMYQNLCGGSGEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKM 375
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEH 311
+ ++MAS+E+ Q +DE + ++H
Sbjct: 376 STQDMASEEL---RQRDDEIKREAERQH 400
>gi|119193931|ref|XP_001247569.1| hypothetical protein CIMG_01340 [Coccidioides immitis RS]
gi|392863190|gb|EAS36089.2| PHD finger domain-containing protein [Coccidioides immitis RS]
Length = 849
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 228 VAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
+ A+E AM++ G + PY+ + R +L N++ KNP R +L G++ P+ M
Sbjct: 319 LGFAIEQAMYQNLCGGSGEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKM 376
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEH 311
+ ++MAS+E+ Q +DE + ++H
Sbjct: 377 STQDMASEEL---RQRDDEIKREAERQH 401
>gi|402882034|ref|XP_003904560.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Papio anubis]
gi|402882036|ref|XP_003904561.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Papio anubis]
Length = 2239
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 653 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVSDSDDLIMTENEVG---KIALHIEKEMFN 709
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 710 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 764
>gi|403341216|gb|EJY69907.1| Transcription elongation factor TFIIS [Oxytricha trifallax]
Length = 340
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 218 DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKP 277
+E+ + ++ + +E +++ + R Y+ K R+++ NLKDPKNPD R ++ G ++P
Sbjct: 194 EEIVLTRAAQLGLQIEDELYKSFPRL-AEYQNKARSLMFNLKDPKNPDLRMSLIEGVIEP 252
Query: 278 ETVVGMTAKEMAS 290
+V + +K +AS
Sbjct: 253 NQLVRLDSKSLAS 265
>gi|358415060|ref|XP_003582994.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Bos taurus]
Length = 2196
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 658 LGPVSPASSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALLIEKEMFN 714
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQ 298
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 715 LFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL----- 769
Query: 299 HEDEERARLWKEHTRK 314
+W+E T K
Sbjct: 770 -------SVWRERTTK 778
>gi|119595730|gb|EAW75324.1| death inducer-obliterator 1, isoform CRA_c [Homo sapiens]
Length = 2276
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 692 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 748
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 749 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 803
>gi|426392422|ref|XP_004062551.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Gorilla gorilla
gorilla]
gi|426392424|ref|XP_004062552.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 2239
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 655 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 711
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 712 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 766
>gi|50556790|ref|XP_505803.1| YALI0F23815p [Yarrowia lipolytica]
gi|74632309|sp|Q6C0K9.1|BYE1_YARLI RecName: Full=Transcription factor BYE1
gi|49651673|emb|CAG78614.1| YALI0F23815p [Yarrowia lipolytica CLIB122]
Length = 822
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 228 VAIALESAMFEKWGRSD----GPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
+A+ +E +++ +G + Y+ K+R + NL+D KN R +V+ GQV P+T+V M
Sbjct: 237 LALTIEQELYDAYGTVEPEIGSNYRDKFRTLSFNLRDSKNETLRIRVMTGQVTPQTLVAM 296
Query: 284 TAKEMASDEM 293
+++EM + E+
Sbjct: 297 SSEEMMNPEL 306
>gi|359071808|ref|XP_003586878.1| PREDICTED: death-inducer obliterator 1 [Bos taurus]
Length = 2196
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 658 LGPVSPASSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALLIEKEMFN 714
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQ 298
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 715 LFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL----- 769
Query: 299 HEDEERARLWKEHTRK 314
+W+E T K
Sbjct: 770 -------SVWRERTTK 778
>gi|440907449|gb|ELR57597.1| Death-inducer obliterator 1 [Bos grunniens mutus]
Length = 2175
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 658 LGPVSPASSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALLIEKEMFN 714
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQ 298
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 715 LFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL----- 769
Query: 299 HEDEERARLWKEHTRK 314
+W+E T K
Sbjct: 770 -------SVWRERTTK 778
>gi|397479128|ref|XP_003810881.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Pan paniscus]
gi|397479130|ref|XP_003810882.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Pan paniscus]
Length = 2240
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 656 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 712
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 713 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 767
>gi|297259403|ref|XP_002798112.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Macaca mulatta]
Length = 2250
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 665 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 721
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 722 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 776
>gi|301129165|ref|NP_149072.2| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|301129170|ref|NP_001180298.1| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|116241332|sp|Q9BTC0.5|DIDO1_HUMAN RecName: Full=Death-inducer obliterator 1; Short=DIO-1;
Short=hDido1; AltName: Full=Death-associated
transcription factor 1; Short=DATF-1
Length = 2240
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 656 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 712
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 713 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 767
>gi|410227672|gb|JAA11055.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410227678|gb|JAA11058.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354253|gb|JAA43730.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 2237
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 656 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 712
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 713 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 767
>gi|332262279|ref|XP_003280189.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Nomascus
leucogenys]
gi|332262281|ref|XP_003280190.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Nomascus
leucogenys]
Length = 2236
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ + E +VA+ +E MF
Sbjct: 652 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLLMTENEVG---KVALHIEKEMFN 708
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEML---- 294
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 709 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKE 768
Query: 295 RSYQHEDEERARLWKEHTRKYMQRM 319
R + E RA+L E ++K + R
Sbjct: 769 RPARSVMESRAKLHNE-SKKTVPRQ 792
>gi|242795417|ref|XP_002482584.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
gi|218719172|gb|EED18592.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
YK K R++ NLK+ NP R++VL +V PE V MT +E+ SDE
Sbjct: 183 YKTKIRSLFQNLKNKSNPQLRQRVLSNEVTPEKFVKMTHEELKSDE 228
>gi|44971714|gb|AAS49899.1| death inducer-obliterator-3 [Homo sapiens]
Length = 2240
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 656 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 712
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V + +E+ S E+
Sbjct: 713 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKEL 767
>gi|7573400|emb|CAB87703.1| putative protein [Arabidopsis thaliana]
Length = 871
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E +++ +G + Y+ + R++L NLKD NP+ R +V+ ++ E + M
Sbjct: 258 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSM 317
Query: 284 TAKEMASDEMLRSYQHEDEERARL 307
TA+E+AS E+ + Q + EE A++
Sbjct: 318 TAEELASKELSQWRQAKAEEMAKM 341
>gi|186522138|ref|NP_196704.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|332004296|gb|AED91679.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 873
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A +E +++ +G + Y+ + R++L NLKD NP+ R +V+ ++ E + M
Sbjct: 260 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSM 319
Query: 284 TAKEMASDEMLRSYQHEDEERARL 307
TA+E+AS E+ + Q + EE A++
Sbjct: 320 TAEELASKELSQWRQAKAEEMAKM 343
>gi|431894600|gb|ELK04400.1| Death-inducer obliterator 1 [Pteropus alecto]
Length = 1849
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 16/140 (11%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L S + + N R+ +R + + L K ++D+ I E + RVA+ +E +F
Sbjct: 621 LGPSSPAPSQPNSQIRQNIRRSLKEILWKRVSDSDDLIMTE---SEVGRVALRIEKELFN 677
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQ 298
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 678 LFRVTDNRYKSKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL----- 732
Query: 299 HEDEERARLWKEH-TRKYMQ 317
+WKE TR M+
Sbjct: 733 -------SVWKERPTRPVME 745
>gi|67537382|ref|XP_662465.1| hypothetical protein AN4861.2 [Aspergillus nidulans FGSC A4]
gi|40741749|gb|EAA60939.1| hypothetical protein AN4861.2 [Aspergillus nidulans FGSC A4]
Length = 386
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 246 PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEML---RSYQHEDE 302
PY+ K R++ NLK+ NP R +VL +V PE V MT +E+ SDE R Q E+
Sbjct: 190 PYRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELRSDEQREKDRKIQKENM 249
Query: 303 ERA 305
++A
Sbjct: 250 DKA 252
>gi|403282553|ref|XP_003932709.1| PREDICTED: death-inducer obliterator 1 [Saimiri boliviensis
boliviensis]
Length = 2234
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L + ++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 655 LGAMGAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 711
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 712 LFHVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 766
>gi|330920676|ref|XP_003299102.1| hypothetical protein PTT_10033 [Pyrenophora teres f. teres 0-1]
gi|311327371|gb|EFQ92822.1| hypothetical protein PTT_10033 [Pyrenophora teres f. teres 0-1]
Length = 904
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACD-SVRVAIALESAMFEKWGRSDG---PYKIK 250
E +RE + ++ S I D A + + + + A FE +G G PY K
Sbjct: 325 EKLRETLTPLINAASDSRGYRIPDGQTAKSLATKFTLQMSHAAFELYGEPTGGSSPYFNK 384
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSY 297
+R ++ N+K KN ++L G +K E +VGM A+EMAS++ R Y
Sbjct: 385 FRTIMFNVK--KNTVLVDRLLSGSLKSEDLVGMEAEEMASEDKQREY 429
>gi|395829525|ref|XP_003787906.1| PREDICTED: death-inducer obliterator 1 [Otolemur garnettii]
Length = 2230
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 659 LGATSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 715
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 716 LFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 770
>gi|426192898|gb|EKV42833.1| hypothetical protein AGABI2DRAFT_195610 [Agaricus bisporus var.
bisporus H97]
Length = 293
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 181 KLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW 240
KL K D R+ E V DAL S E I + A +E +
Sbjct: 122 KLDGVKGGTGDTTRDKCIELVYDALVNDSSAPVELI---------LSRARGVEKCVHHDN 172
Query: 241 GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
G + YK K R++ NLKD NP FR V+ G V E + MT+++MAS+E
Sbjct: 173 GGTTAAYKQKIRSLFVNLKDKNNPGFRENVISGDVPVEKLAKMTSEDMASEE 224
>gi|303285732|ref|XP_003062156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456567|gb|EEH53868.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 228 VAIALESAMFEKWGR--SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
+ + +E A+FE G S+G Y+ + R++ NL KN R L G + P T+ MT
Sbjct: 104 LGVKIERALFEAHGEDASNGEYRARARSIAFNLA--KNESLRVGALAGDIAPATIARMTP 161
Query: 286 KEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
E+A+++M + + +E RL ++ TR M
Sbjct: 162 DELATEDMRNARKKMEE---RLTRKRTRTNM 189
>gi|409075972|gb|EKM76347.1| hypothetical protein AGABI1DRAFT_45124 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 293
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 9/112 (8%)
Query: 181 KLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW 240
KL K D R+ E V DAL S E I + A +E +
Sbjct: 122 KLDGVKGGTGDTTRDKCIELVYDALVNDSSAPVELI---------LSRARGVEKCVHHDN 172
Query: 241 GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
G + YK K R++ NLKD NP FR V+ G V E + MT+++MAS+E
Sbjct: 173 GGTTAAYKQKIRSLFVNLKDKNNPGFRENVISGDVPVEKLAKMTSEDMASEE 224
>gi|440800297|gb|ELR21336.1| transcription factor sii (tfiis), central domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 653
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 189 CNDCFREVVREKV----CDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWG-RS 243
C++ R VRE+V +ALS E R V+A +A +E+ M+ + ++
Sbjct: 225 CDETTR-AVRERVVASLAEALSMPRPATAENERSVVDAAAVQALAEGIETEMWRMFELQT 283
Query: 244 DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YK K+R +L NLKD +N + R VL G++ P + T+KE+A E+
Sbjct: 284 SSAYKAKFRTLLFNLKDERNQELRESVLSGEMAPAELCKKTSKELAPTEL 333
>gi|307203942|gb|EFN82849.1| Death-inducer obliterator 1 [Harpegnathos saltator]
Length = 2352
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 212 ADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVL 271
DEEI D +A +E M++ + + YK KYR+++ N+KD KN RK+
Sbjct: 1340 TDEEIAD---------LAFNIELEMYKYFKDTGAKYKAKYRSLVFNIKDTKNLTLFRKIA 1390
Query: 272 FGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEH 311
+ P+ VV ++ EMAS E+ + E + + + K++
Sbjct: 1391 DRSLTPDAVVRLSPDEMASQELAEWREKETKHQLEMIKKN 1430
>gi|166796454|gb|AAI59331.1| Unknown (protein for IMAGE:8927043) [Xenopus (Silurana) tropicalis]
Length = 1162
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 226 VRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
R+A +E MF + +D YK KYR ++ NLKDPKN +VL ++ +V +
Sbjct: 647 ARIATNIEREMFNLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKP 706
Query: 286 KEMASDEM 293
+E+AS ++
Sbjct: 707 EELASRKL 714
>gi|358367754|dbj|GAA84372.1| transcription elongation factor S-II [Aspergillus kawachii IFO
4308]
Length = 303
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 229 AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A A+E+A F G + Y+ K R++ NLK+ NP R +VL G V PE V M+ E
Sbjct: 171 ASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPSLRVRVLNGDVTPERFVRMSHDE 230
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYM 316
LRS + ++ +R R+ KE+ K M
Sbjct: 231 ------LRSEEQQERDR-RIQKENMDKAM 252
>gi|449482931|ref|XP_004174984.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Taeniopygia
guttata]
Length = 381
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 46/276 (16%)
Query: 36 DALDQLNKSDITCPLLVSTQLVRYLLPLTEH-PTKKIQDFASDLIVSWRDMFLEQIRDEK 94
D L +L D+T L T++ + + + ++ P+ ++ A L+ W+ ++
Sbjct: 49 DHLKELEDVDMTVEYLQGTEVTKAVYRVLKNCPSGALKKKAKQLLSRWKTLY-------- 100
Query: 95 KGSCTIPGDTEPAKIEKVDKRTSEECQEISGV--------GIVKVQKVDQNSTSS--SSN 144
K +C + P K + V EE + +S V G + + +D S++S S
Sbjct: 101 KNNC---AQSMPVK-KSVSVYVKEEIEHLSVVPREQLLSEGPCQQEALDGTSSNSLIPSQ 156
Query: 145 VVRSEIVETEE--TNSADNVNVGNSITEE-----GEASGIILHKLSSSKIRCNDCFREVV 197
V++ + E N + +++ ++ GEAS L + +RC
Sbjct: 157 TVKNVVCSNAEGRMNRLSSFEAQHTVDDDSKFVVGEAS---LQQDLMRALRC-------- 205
Query: 198 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGN 257
K D L K ++ +DE + +A +E +F ++D YK R+ + N
Sbjct: 206 --KCVDLLYKALIDS---AKDEEETGKWLELAKEIEEHIFALHAKNDKKYKNCIRSKISN 260
Query: 258 LKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
LK+PK+ + + G + P+ MT EMASDE+
Sbjct: 261 LKNPKSCHLKHNLFSGTLSPKAFAEMTVMEMASDEL 296
>gi|296805870|ref|XP_002843759.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
gi|238845061|gb|EEQ34723.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
Length = 297
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 229 AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A +E+A F +G + Y+ K R++ NLK N R +VL G+V P+ V MT +E
Sbjct: 165 ATEVEAAAFNTYGPETKESYRTKIRSLYQNLKQKSNLSLRTRVLTGEVTPDRFVSMTHEE 224
Query: 288 MASDEML---RSYQHEDEERA 305
+ SDE R Q E+ ++A
Sbjct: 225 LKSDERREEDRKIQKENMDKA 245
>gi|425778300|gb|EKV16434.1| hypothetical protein PDIP_35810 [Penicillium digitatum Pd1]
gi|425780677|gb|EKV18681.1| hypothetical protein PDIG_07750 [Penicillium digitatum PHI26]
Length = 880
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Query: 227 RVAIALESAMFEKW-GRSDGP---YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
++A+++E AM+E GRS P YK + R+++ N+K KN R +++ G + P+ +
Sbjct: 368 QLALSIEDAMYESICGRSGEPNESYKAQLRSIMFNVK--KNASLRDRLIIGSLSPKLLSQ 425
Query: 283 MTAKEMASDEMLRSYQHEDEERARLWKEH 311
MT EMAS+E+ Q +D E R H
Sbjct: 426 MTTAEMASEEL----QQKDAEIKREADRH 450
>gi|50730263|ref|XP_416834.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Gallus gallus]
Length = 359
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 122/269 (45%), Gaps = 33/269 (12%)
Query: 36 DALDQLNKSDITCPLLVSTQLVRYLLPLTEH-PTKKIQDFASDLIVSWRDMF----LEQI 90
D L +L +T L T++ + + + + P+ +++ A L+ W+ ++ L+ +
Sbjct: 28 DHLKELEDVSMTVEYLQGTEVAKVVYRILKSCPSAELKKKAKQLLSRWKALYKNNRLQSV 87
Query: 91 RDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEI 150
+ +K S + TE +I + CQ+ + +D S +V
Sbjct: 88 QVKKSVSVCVSEATEHLEIPGEQLLSEGPCQQ---------EVLD---AVPSKILVPPRT 135
Query: 151 VETEETNSADNVNVGNSITEEG----EASGIILHKLSSSKIRCNDCFREVVREKVCDALS 206
V+ +N+AD S EEG E S ++++ S + D R +R K D L
Sbjct: 136 VKKVASNNADGSRDQLSPFEEGHTDNEGSKPLVNEAGSQQ----DHMR-ALRCKCTDLLY 190
Query: 207 K-VSGEA-DEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNP 264
K ++G A D+E D+ + ++ +E +F ++D YK R+ + NLK+PK+
Sbjct: 191 KALTGSAKDKEETDKW-----LELSKEIEEHVFALHCKNDKKYKNCIRSKISNLKNPKSC 245
Query: 265 DFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ + + G + P+ MT EMASDE+
Sbjct: 246 NLKHNLFSGTLSPKAFAEMTVMEMASDEL 274
>gi|320164226|gb|EFW41125.1| transcription elongation factor A [Capsaspora owczarzaki ATCC
30864]
Length = 433
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 18/129 (13%)
Query: 184 SSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDS-VRVAIALESAMFEKWGR 242
S+ + D R+ + + AL D + DE + V +A ++E+++++
Sbjct: 136 STLVHTGDAHRDSCIKALAKAL-------DPTVTDETQISEYFVSLAQSIEASIYKLHNS 188
Query: 243 SDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHED 301
P YK R+ + NLK +N DFR+ VL G + PE V MT++EMA+ E+ +
Sbjct: 189 EVSPKYKTAVRSKMFNLK--QNEDFRKAVLNGSIPPEKVAVMTSEEMATKEL-------N 239
Query: 302 EERARLWKE 310
ER +L E
Sbjct: 240 AERKKLTTE 248
>gi|121705046|ref|XP_001270786.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
gi|119398932|gb|EAW09360.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
Length = 304
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 220 VNACDSVRV----AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+N+ +S R A A+E+A F G + Y+ K R++ NLK+ NP R +VL
Sbjct: 159 LNSTESPRAVLSKACAVEAAAFSALGPETKEQYRTKIRSLYQNLKNKSNPTLRTRVLAND 218
Query: 275 VKPETVVGMTAKEMASDEML---RSYQHEDEERA 305
V PE V MT E+ S E R Q E+ ++A
Sbjct: 219 VTPEQFVKMTYDELKSAEQREQDRKIQKENMDKA 252
>gi|46108040|ref|XP_381078.1| hypothetical protein FG00902.1 [Gibberella zeae PH-1]
Length = 307
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 226 VRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
V AI +E+A F K+ YK K R++ NLK+ N + + VL G++ PE V M+
Sbjct: 172 VNKAITVENAAFVKFKGETADYKKKIRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSD 231
Query: 286 KEMASDE 292
E+ S+E
Sbjct: 232 DELKSEE 238
>gi|224042778|ref|XP_002197835.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Taeniopygia
guttata]
Length = 360
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 46/276 (16%)
Query: 36 DALDQLNKSDITCPLLVSTQLVRYLLPLTEH-PTKKIQDFASDLIVSWRDMFLEQIRDEK 94
D L +L D+T L T++ + + + ++ P+ ++ A L+ W+ ++
Sbjct: 28 DHLKELEDVDMTVEYLQGTEVTKAVYRVLKNCPSGALKKKAKQLLSRWKTLY-------- 79
Query: 95 KGSCTIPGDTEPAKIEKVDKRTSEECQEISGV--------GIVKVQKVDQNSTSS--SSN 144
K +C + P K + V EE + +S V G + + +D S++S S
Sbjct: 80 KNNC---AQSMPVK-KSVSVYVKEEIEHLSVVPREQLLSEGPCQQEALDGTSSNSLIPSQ 135
Query: 145 VVRSEIVETEE--TNSADNVNVGNSITEE-----GEASGIILHKLSSSKIRCNDCFREVV 197
V++ + E N + +++ ++ GEAS L + +RC
Sbjct: 136 TVKNVVCSNAEGRMNRLSSFEAQHTVDDDSKFVVGEAS---LQQDLMRALRC-------- 184
Query: 198 REKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGN 257
K D L K ++ +DE + +A +E +F ++D YK R+ + N
Sbjct: 185 --KCVDLLYKALIDS---AKDEEETGKWLELAKEIEEHIFALHAKNDKKYKNCIRSKISN 239
Query: 258 LKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
LK+PK+ + + G + P+ MT EMASDE+
Sbjct: 240 LKNPKSCHLKHNLFSGTLSPKAFAEMTVMEMASDEL 275
>gi|408389619|gb|EKJ69057.1| hypothetical protein FPSE_10756 [Fusarium pseudograminearum CS3096]
Length = 308
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 226 VRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
V AI +E+A F K+ YK K R++ NLK+ N + + VL G++ PE V M+
Sbjct: 173 VNKAITVENAAFVKFKGETADYKKKIRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSD 232
Query: 286 KEMASDE 292
E+ S+E
Sbjct: 233 DELKSEE 239
>gi|448079285|ref|XP_004194362.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359375784|emb|CCE86366.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 226 VRVAIALESAMF--EKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
V VA +E+ ++ EK SD Y+ K R NL++ KNPD R ++L G++ PE + M
Sbjct: 160 VAVAKDIENEVYRSEKLSISDS-YRTKLRTFTMNLRNKKNPDLRDRLLSGKISPEAFIKM 218
Query: 284 TAKEMASDEM 293
+ +MA + +
Sbjct: 219 SPNDMAPEAL 228
>gi|40287880|gb|AAR84050.1| death inducer-obliterator-3 [Mus musculus]
Length = 2256
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S + + N R+ +R + + L K ++D I E ++A+ +E MF
Sbjct: 653 LGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDYLIMTENEVG---KIALHIEKEMFN 709
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D +K KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 710 LFQVTDNRFKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 764
>gi|149734279|ref|XP_001491643.1| PREDICTED: death-inducer obliterator 1 [Equus caballus]
Length = 2272
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L S + + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 659 LGTSSPAPSQPNSQIRQNIRRSLKEILWKRVSDSDDLIMTENEVG---KIALHIEKEMFN 715
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ +D YK KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 716 LFRVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 770
>gi|307187162|gb|EFN72405.1| Death-inducer obliterator 1 [Camponotus floridanus]
Length = 2322
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 212 ADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVL 271
DEEI D +A +E M++ + + YK KYR+++ N+KD KN RK+
Sbjct: 1330 TDEEIAD---------LAFNIELEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIA 1380
Query: 272 FGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEH 311
+ P+ VV ++ EMAS E+ + E + + + K++
Sbjct: 1381 DRSLTPDAVVRLSPDEMASQELAEWREKETKHQLEMIKKN 1420
>gi|207345303|gb|EDZ72168.1| YGL043Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323333438|gb|EGA74832.1| Dst1p [Saccharomyces cerevisiae AWRI796]
Length = 242
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 86/217 (39%), Gaps = 52/217 (23%)
Query: 78 LIVSWRDMFLEQIRD---EKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKV 134
+I SW+D + R ++ PG+ E DK T E V V
Sbjct: 1 MISSWKDAINKNKRSRQAQQHHQDHAPGNAE-------DKTTVGE----------SVNGV 43
Query: 135 DQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFR 194
Q ++S S + + + V T+ NS + +G + I HKL R
Sbjct: 44 QQPASSQSDAMKQDKYVSTKPRNSKN----------DGVDTAIYHHKL-----------R 82
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWGRSDGPYKIKYR 252
+ V + + D L+K S + I + A A+ES M ++ YK +YR
Sbjct: 83 DQVLKALYDVLAKESEHPPQSI---------LHTAKAIESEMNKVNNCDTNEAAYKARYR 133
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
+ N+ NPD + K+ G + PE + AK++A
Sbjct: 134 IIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 170
>gi|119492710|ref|XP_001263674.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
gi|119411834|gb|EAW21777.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
Length = 304
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 12/102 (11%)
Query: 220 VNACDSVRV----AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+N+ +S R A A+E+A F G + Y+ K R++ NLK+ NP R +VL +
Sbjct: 159 LNSTESPRAVLSKACAVEAAAFSALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNE 218
Query: 275 VKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
V PE V M+ E L+S + ++ER ++ KE+ K M
Sbjct: 219 VTPEQFVKMSHDE------LKSAEQREQER-KIQKENMDKAM 253
>gi|327305353|ref|XP_003237368.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
gi|326460366|gb|EGD85819.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
Length = 297
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 226 VRVAIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+R A +E+A F+ +G + Y+ K R++ NLK+ N R +VL +V PE V MT
Sbjct: 162 LRKATEVEAAAFKAFGPETKEVYRSKMRSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMT 221
Query: 285 AKEMASDEML---RSYQHEDEERA 305
+E+ SDE R Q E+ ++A
Sbjct: 222 HEELKSDERREEDRKIQKENMDKA 245
>gi|336369371|gb|EGN97713.1| hypothetical protein SERLA73DRAFT_184533 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382153|gb|EGO23304.1| hypothetical protein SERLADRAFT_472264 [Serpula lacrymans var.
lacrymans S7.9]
Length = 298
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ E + DAL+ SG E+I + A A+ESA+ ++ YK K
Sbjct: 137 DKTRDKCMELIYDALACDSGAPSEQI---------LGRARAIESAVVAQFSGPSVEYKSK 187
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
R++ NLKD NP R ++ G + E M++ EMAS+E
Sbjct: 188 IRSLFVNLKDKNNPGLRESIVSGDLSVEKFGKMSSAEMASEE 229
>gi|169780530|ref|XP_001824729.1| transcription elongation factor S-II [Aspergillus oryzae RIB40]
gi|238505302|ref|XP_002383880.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|83773469|dbj|BAE63596.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689994|gb|EED46344.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|391872022|gb|EIT81165.1| transcription elongation factor TFIIS/Cofactor of enhancer-binding
protein [Aspergillus oryzae 3.042]
Length = 304
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 220 VNACDSVRVAIALESAMFEKWGRSDGP-----YKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+N+ ++ R ++ SA+ +S GP Y+ K R++ NLK+ NP R +VL
Sbjct: 159 LNSTEAPRNVLSKASAVEAAAYKSLGPETKEQYRTKIRSLFQNLKNKSNPSLRIRVLSND 218
Query: 275 VKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
V P+ V M+ E+ SDE + E+ A++ KE+ K M
Sbjct: 219 VTPDQFVRMSHDELRSDE-------QREKDAKIQKENMDKAM 253
>gi|449266698|gb|EMC77719.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Columba livia]
Length = 360
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 196 VVREKVCDALSK-VSGEA-DEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRA 253
V+R K D L K ++G A D+E D+ + ++ +E +F +++ YK R+
Sbjct: 181 VLRCKCTDLLYKALAGSAKDKEETDKW-----LELSKEIEEHIFSLHAKNNKKYKNCIRS 235
Query: 254 VLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ NLK+PK+ R + G + P+ MT EMASDE+
Sbjct: 236 KISNLKNPKSCHLRHNLFSGTLSPKAFAEMTVMEMASDEL 275
>gi|448083875|ref|XP_004195463.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359376885|emb|CCE85268.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 226 VRVAIALESAMF--EKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
V VA +E+ ++ EK SD Y+ K R NL++ KNPD R ++L G++ PE + M
Sbjct: 160 VAVAKDIENEVYRSEKLSISDS-YRTKLRTFTMNLRNKKNPDLRDRLLSGKISPEAFIKM 218
Query: 284 TAKEMASDEM 293
+ +MA + +
Sbjct: 219 SPNDMAPEAL 228
>gi|345487114|ref|XP_003425625.1| PREDICTED: hypothetical protein LOC100679883 isoform 2 [Nasonia
vitripennis]
Length = 2039
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 193 FREVVREKVCDAL-SKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKY 251
R VR+ + + L S+V D I +E + +A+ +E MF+ + + YK KY
Sbjct: 1305 IRLTVRKTLAELLTSRVKEANDLAITEE----EISELALQIELEMFKFFKDTGQKYKSKY 1360
Query: 252 RAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEH 311
R+++ N+KD KN RK+ + P VV ++ EMAS E+ + E++ + + K++
Sbjct: 1361 RSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQELAEWREKENKHQLEMIKKN 1420
Query: 312 TRKYM 316
M
Sbjct: 1421 ELDLM 1425
>gi|6321395|ref|NP_011472.1| Dst1p [Saccharomyces cerevisiae S288c]
gi|1729915|sp|P07273.4|TFS2_YEAST RecName: Full=Transcription elongation factor S-II; AltName:
Full=DNA strand transfer protein alpha; Short=STP-alpha;
AltName: Full=DNA strand transferase 1; AltName:
Full=Pyrimidine pathway regulatory protein 2
gi|34810565|pdb|1PQV|S Chain S, Rna Polymerase Ii-Tfiis Complex
gi|218517|dbj|BAA02046.1| transcriptional elongation factor S-II [Saccharomyces cerevisiae]
gi|1322528|emb|CAA96744.1| DST1 [Saccharomyces cerevisiae]
gi|151943248|gb|EDN61561.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
gi|190407007|gb|EDV10274.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
RM11-1a]
gi|256271330|gb|EEU06396.1| Dst1p [Saccharomyces cerevisiae JAY291]
gi|285812157|tpg|DAA08057.1| TPA: Dst1p [Saccharomyces cerevisiae S288c]
gi|323304905|gb|EGA58662.1| Dst1p [Saccharomyces cerevisiae FostersB]
gi|323309085|gb|EGA62313.1| Dst1p [Saccharomyces cerevisiae FostersO]
gi|323337623|gb|EGA78868.1| Dst1p [Saccharomyces cerevisiae Vin13]
gi|323348527|gb|EGA82771.1| Dst1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354949|gb|EGA86780.1| Dst1p [Saccharomyces cerevisiae VL3]
gi|349578179|dbj|GAA23345.1| K7_Dst1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765583|gb|EHN07090.1| Dst1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299216|gb|EIW10310.1| Dst1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 309
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 87/224 (38%), Gaps = 52/224 (23%)
Query: 71 IQDFASDLIVSWRDMFLEQIRD---EKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVG 127
I +I SW+D + R ++ PG+ E DK T E
Sbjct: 61 ISKLVKKMISSWKDAINKNKRSRQAQQHHQDHAPGNAE-------DKTTVGES------- 106
Query: 128 IVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKI 187
V V Q ++S S + + + V T+ NS + +G + I HKL
Sbjct: 107 ---VNGVQQPASSQSDAMKQDKYVSTKPRNSKN----------DGVDTAIYHHKL----- 148
Query: 188 RCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWGRSDG 245
R+ V + + D L+K S + I + A A+ES M ++
Sbjct: 149 ------RDQVLKALYDVLAKESEHPPQSI---------LHTAKAIESEMNKVNNCDTNEA 193
Query: 246 PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
YK +YR + N+ NPD + K+ G + PE + AK++A
Sbjct: 194 AYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 237
>gi|301780734|ref|XP_002925785.1| PREDICTED: death-inducer obliterator 1-like [Ailuropoda
melanoleuca]
Length = 2165
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
N R+ +R + + L K ++D+ I E + ++A+ +E MF+ + +D YK
Sbjct: 665 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE---SEVGKIALHIEKEMFQLFQVTDNRYKS 721
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 722 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 765
>gi|281352337|gb|EFB27921.1| hypothetical protein PANDA_015330 [Ailuropoda melanoleuca]
Length = 2163
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
N R+ +R + + L K ++D+ I E + ++A+ +E MF+ + +D YK
Sbjct: 665 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE---SEVGKIALHIEKEMFQLFQVTDNRYKS 721
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 722 KYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 765
>gi|171687673|ref|XP_001908777.1| hypothetical protein [Podospora anserina S mat+]
gi|170943798|emb|CAP69450.1| unnamed protein product [Podospora anserina S mat+]
Length = 295
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 226 VRVAIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
VR+A+ +E+A F + + D P Y+ K R ++ +LK NP ++V G + P+T V MT
Sbjct: 160 VRLAMEVEAAAFRVF-KGDTPEYRQKIRGLMTSLKRKDNPALGKRVRSGAITPDTFVKMT 218
Query: 285 AKEMASDEMLRSYQHEDEERARLWKEHTRK 314
E+ASD + + EDE +L +E+ +K
Sbjct: 219 DVELASD----AQRAEDE---KLQQENMKK 241
>gi|388583993|gb|EIM24294.1| transcription elongation factor [Wallemia sebi CBS 633.66]
Length = 282
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 229 AIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A+++ES + + S G YK K R+++ NLKD KNP R V+ G T M++ +
Sbjct: 149 ALSIESTVLDDNNGSTGEEYKKKVRSLMLNLKDKKNPSLREAVISGDTPAATFCRMSSAD 208
Query: 288 MASDEMLRSYQHEDEERARLWK 309
MAS+E R Q E + L+K
Sbjct: 209 MASEE--RKQQDRALELSNLFK 228
>gi|345487112|ref|XP_003425624.1| PREDICTED: hypothetical protein LOC100679883 isoform 1 [Nasonia
vitripennis]
Length = 2181
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 193 FREVVREKVCDAL-SKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKY 251
R VR+ + + L S+V D I +E + +A+ +E MF+ + + YK KY
Sbjct: 1298 IRLTVRKTLAELLTSRVKEANDLAITEE----EISELALQIELEMFKFFKDTGQKYKSKY 1353
Query: 252 RAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEH 311
R+++ N+KD KN RK+ + P VV ++ EMAS E+ + E++ + + K++
Sbjct: 1354 RSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQELAEWREKENKHQLEMIKKN 1413
>gi|68486327|ref|XP_712962.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|68486518|ref|XP_712868.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434285|gb|EAK93699.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434386|gb|EAK93797.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|238879330|gb|EEQ42968.1| hypothetical protein CAWG_01194 [Candida albicans WO-1]
Length = 305
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 226 VRVAIALESAMFE-KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+R+AI +E+ +++ ++ + Y+ + R+ NL++ KNP+ R ++L Q+ P + MT
Sbjct: 169 LRIAIEIEAEVYKSEYSKVSDSYRNRLRSFTMNLRNKKNPELRERILSKQILPAAFIKMT 228
Query: 285 AKEMASDEM 293
EMA + +
Sbjct: 229 PNEMAPEAL 237
>gi|241948245|ref|XP_002416845.1| DNA strand transfer protein alpha, putative; dna strand transferase
1, putative; pyrimidine pathway regulatory protein 2,
putative; transcription elongation factor SII, putative
[Candida dubliniensis CD36]
gi|223640183|emb|CAX44432.1| DNA strand transfer protein alpha, putative [Candida dubliniensis
CD36]
Length = 303
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 226 VRVAIALESAMFE-KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+R+AI +ES +++ ++ + Y+ K R+ NL++ KNP+ R ++L Q+ P + M+
Sbjct: 167 LRIAIEIESEVYKNEYSKISDSYRNKLRSFTMNLRNKKNPELRERILSKQILPAEFIKMS 226
Query: 285 AKEMASDEM 293
EMA + +
Sbjct: 227 PNEMAPEAL 235
>gi|121699592|ref|XP_001268072.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
gi|119396214|gb|EAW06646.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
Length = 853
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
Query: 227 RVAIALESAMFEKW-GRSDGP---YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
++ +++E AM++ G S P YK++ R VL N+K KNP R ++L G + P+ +
Sbjct: 293 QLGLSIEKAMYQNICGGSGEPTEAYKLQLRTVLFNVK--KNPSLRDRLLVGSLLPDKLSQ 350
Query: 283 MTAKEMASDEM 293
M++++MAS+E+
Sbjct: 351 MSSQDMASEEL 361
>gi|340517178|gb|EGR47423.1| predicted protein [Trichoderma reesei QM6a]
Length = 309
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
A+A+E+A + + YK K R++ NLK+ N D ++V+ G + PE V MT +++
Sbjct: 177 AVAVENAAYTVFNGEGAEYKKKIRSLFANLKNKSNRDLGKRVMSGDIAPERFVSMTDEDL 236
Query: 289 ASDEMLR 295
S++ R
Sbjct: 237 KSEDQRR 243
>gi|322786324|gb|EFZ12874.1| hypothetical protein SINV_06958 [Solenopsis invicta]
Length = 113
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 249 IKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
++ R+ + NL+D KNP+ R L G + P + MTA+EMASDE+
Sbjct: 1 MQVRSRVANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEI 45
>gi|145234013|ref|XP_001400379.1| transcription elongation factor S-II [Aspergillus niger CBS 513.88]
gi|134057319|emb|CAK44518.1| unnamed protein product [Aspergillus niger]
gi|350635099|gb|EHA23461.1| hypothetical protein ASPNIDRAFT_37464 [Aspergillus niger ATCC 1015]
Length = 303
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 229 AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A A+E+A F G + Y+ K R++ NLK+ NP R +VL G V PE V M+ E
Sbjct: 171 ASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLNGDVTPEQFVRMSHDE 230
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYM 316
LRS + ++ +R ++ KE+ K M
Sbjct: 231 ------LRSAEQQERDR-KIQKENMDKAM 252
>gi|358390984|gb|EHK40389.1| hypothetical protein TRIATDRAFT_302747 [Trichoderma atroviride IMI
206040]
Length = 305
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D + A+A+E A F YK K R++ NLK+ N D ++V+ G + PE V M
Sbjct: 168 DVIARAVAVEHAAFTTLKGETPEYKKKIRSLFTNLKNKSNRDLGKQVMAGDISPEKFVNM 227
Query: 284 TAKEMASDE 292
T +E+ S++
Sbjct: 228 TDEELKSED 236
>gi|367015614|ref|XP_003682306.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
gi|359749968|emb|CCE93095.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
Length = 295
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDG---P 246
N R++V + DAL+K S + I ++ A A+E M K DG
Sbjct: 131 NHKLRDMVIRAMYDALAKDSEHPPKSI---------LQTAKAVEEEM-HKLNNCDGSEKA 180
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
YK KYR + N+ NPD + K+ G V P +V KE+A + + R
Sbjct: 181 YKDKYRIIYSNIISKNNPDLKHKITSGDVSPFYLVNCDPKELAPEHLRR 229
>gi|328876868|gb|EGG25231.1| RNA polymerase II elongation factor [Dictyostelium fasciculatum]
Length = 325
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 218 DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKP 277
DE+ + A+ +ES +FE +G ++ YK+K R+++ NLK N ++ +L +
Sbjct: 185 DEITELHYNQAAVEIESQLFETYGGANSDYKVKARSIIFNLKS--NHLLKKNILSKTLTV 242
Query: 278 ETVVGMTAKEMASDEMLRSYQHEDEERARLWK 309
M A EMA+ E+ EER R+ K
Sbjct: 243 TRFCTMDATEMANKEL-------KEERERMLK 267
>gi|301628193|ref|XP_002943242.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 2281
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 226 VRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
R+A +E MF + +D YK KYR ++ NLKDPKN +VL ++ +V +
Sbjct: 732 ARIATNIEREMFNLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKP 791
Query: 286 KEMASDEM 293
+E+AS ++
Sbjct: 792 EELASRKL 799
>gi|343427400|emb|CBQ70927.1| related to transcription elongation factor TFIIS [Sporisorium
reilianum SRZ2]
Length = 319
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACDS--VRVAIALESAMFEKWGRS--DGPYKIK 250
E++ +KV +A K+ + E +D DS A+A+E+A+ G+ Y+ K
Sbjct: 149 EILNDKVRNACLKLLYNSLEIGKDAHGWSDSQIFDAAVAVEAAILANQGKGAVTTEYRNK 208
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
R++ N+KD NPD R +V+ + +T+V M+ +E+ASD+ R
Sbjct: 209 VRSLSLNIKDKNNPDLRARVVERDIPADTLVTMSNEELASDKRKR 253
>gi|344232834|gb|EGV64707.1| transcription elongation factor [Candida tenuis ATCC 10573]
Length = 286
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 226 VRVAIALESAMF-EKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+ VA ++E+ +F +++ + Y+ K R + NL++ KNP+ R ++L GQ+ P V M+
Sbjct: 150 LSVAKSIEAEVFKDEYSKVADGYRNKLRTFVMNLRNKKNPELRDRILSGQITPGKFVKMS 209
Query: 285 AKEMASDEM 293
EMA + +
Sbjct: 210 PNEMAPETL 218
>gi|301628195|ref|XP_002943243.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 2209
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 226 VRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
R+A +E MF + +D YK KYR ++ NLKDPKN +VL ++ +V +
Sbjct: 660 ARIATNIEREMFNLYRDTDSRYKAKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKP 719
Query: 286 KEMASDEM 293
+E+AS ++
Sbjct: 720 EELASRKL 727
>gi|82915268|ref|XP_729034.1| transcription elongation factor TFIIS.h [Plasmodium yoelii yoelii
17XNL]
gi|23485845|gb|EAA20599.1| transcription elongation factor TFIIS.h, putative [Plasmodium
yoelii yoelii]
Length = 366
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 114/256 (44%), Gaps = 24/256 (9%)
Query: 45 DITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDT 104
+I +L T++ + T+ + I++ + +L+ W+++ +++ ++ + S
Sbjct: 53 EINKDILKQTKIGVTVNKFTKINNESIKNISKELVDKWKNIAIKE-KNSNRNS------- 104
Query: 105 EPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRS-EIVETEETNSADNVN 163
E + KR E + + K ++ + STS S N S I E +E N +N
Sbjct: 105 -----ENIKKRKHSETENSNNNVNEKEPELKKKSTSCSLNNNNSTHINEDKENNGKNNTK 159
Query: 164 VGNSITEEGEASGII----LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADE--EIR 217
+ E I+ + K + S +D R+ ++ + A ++G D I
Sbjct: 160 SYAYNSNENRKINIVDIEEIQKWNYSGKYHHDVLRDKAKQFLFKAF--IAGSHDNLLHII 217
Query: 218 DEVNACDSVRVAIALE-SAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVK 276
D+ N D++ I E +F + S Y ++ +++ NL D KNP+F K+ +
Sbjct: 218 DQ-NKLDNIIYNIENELFKIFIERKNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYIS 276
Query: 277 PETVVGMTAKEMASDE 292
T+ M +++MASDE
Sbjct: 277 ARTLATMNSQDMASDE 292
>gi|148234998|ref|NP_001088057.1| death inducer-obliterator 1 [Xenopus laevis]
gi|52354786|gb|AAH82851.1| LOC494751 protein [Xenopus laevis]
Length = 2234
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 94/206 (45%), Gaps = 14/206 (6%)
Query: 93 EKKGSC--TIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTS-SSSNVVRSE 149
+ KG+C T D++P+ K K + V K+ N S + S ++
Sbjct: 535 QNKGTCLPTKSSDSKPSPFPK--KHLTPSMTSAPSQKKVSSSKLPLNQKSLAPSPFAKAS 592
Query: 150 IVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDALSKVS 209
+ + +A + +S + +S + +SS+ N R+ +R + + L K
Sbjct: 593 MAKPPPKPTASSSRPASSTPQSAPSSSQVA--TNSSQPGPNMQIRQNIRRSLKEILWKRV 650
Query: 210 GEADE--EIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFR 267
++D+ + +EV R+A +E MF + +D YK KYR ++ NLKDPKN
Sbjct: 651 IDSDDLVMVENEV-----ARIASNIEREMFNLYRDTDSRYKSKYRNIMFNLKDPKNQGLY 705
Query: 268 RKVLFGQVKPETVVGMTAKEMASDEM 293
+VL ++ +V + +++AS ++
Sbjct: 706 HRVLKEEISLAKLVRLKPEDLASKKL 731
>gi|301791824|ref|XP_002930880.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Ailuropoda melanoleuca]
Length = 285
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
++A +E ++E+ D Y + + NLKD +NP RR VL G + + MTA+
Sbjct: 169 KMASVIEDNIYEELKSMDMKYWNLVHSXIRNLKDXRNPSLRRNVLSGTISAGLIAKMTAE 228
Query: 287 EMASDEM 293
EMA DE+
Sbjct: 229 EMACDEL 235
>gi|340719413|ref|XP_003398148.1| PREDICTED: hypothetical protein LOC100650691 [Bombus terrestris]
Length = 2365
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 212 ADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVL 271
DEEI D +A +E +++ + + YK KYR+++ N+KD KN RK+
Sbjct: 1294 TDEEIAD---------LAYNIELELYKYFKDTGAKYKAKYRSLVFNIKDTKNLTLFRKIA 1344
Query: 272 FGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEH 311
+ P+ VV ++ EMAS E+ + E + + + K++
Sbjct: 1345 DRSLTPDAVVRLSPDEMASQELAEWREKETKHQLEMIKKN 1384
>gi|171424|gb|AAA34580.1| DST1 [Saccharomyces cerevisiae]
gi|172773|gb|AAA88734.1| DNA strand transferase alpha [Saccharomyces cerevisiae]
Length = 309
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 86/225 (38%), Gaps = 54/225 (24%)
Query: 71 IQDFASDLIVSWRDMFLEQIRDEKKGSCTIPG----DTEPAKIEKVDKRTSEECQEISGV 126
I +I SW+ ++ R C P D P E DK T E
Sbjct: 61 ISKLVKKMISSWKAQLIKNKR------CRQPQQHHQDHAPGNAE--DKTTVGES------ 106
Query: 127 GIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSK 186
V V Q ++S S + + + V T+ NS + +G + I HKL
Sbjct: 107 ----VNGVQQPASSQSDAMKQDKYVSTKPRNSKN----------DGVDTAIYHHKL---- 148
Query: 187 IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWGRSD 244
R+ V + + D L+K S + I + A A+ES M ++
Sbjct: 149 -------RDQVLKALYDVLAKESEHPPQSI---------LHTAKAIESEMNKVNNCDTNE 192
Query: 245 GPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
YK +YR + N+ NPD + K+ G + PE + AK++A
Sbjct: 193 AAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 237
>gi|388854758|emb|CCF51651.1| related to transcription elongation factor TFIIS [Ustilago hordei]
Length = 317
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 195 EVVREKVCDALSKV---SGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSD--GPYKI 249
E++ +KV +A K+ S E ++E R N A+A+E+A+ G+ Y+
Sbjct: 147 EILNDKVRNACLKLLYQSLEINKEQRG-FNDSQVFDAAVAVEAAILANQGKGSVTADYRN 205
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
K R++ N+KD NPD R +V+ + + +V MT +E+ASD+ R
Sbjct: 206 KVRSLSLNIKDKNNPDLRVRVIERDIPADKLVTMTNEELASDKRKR 251
>gi|190345115|gb|EDK36938.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 228 VAIALESAMF-EKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
VA +E +F +++ + Y+ K R + NL++ KNPD R ++L GQ+ P + M
Sbjct: 79 VARNIELGVFKQEYSAVNDAYRNKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNPN 138
Query: 287 EMASDEM 293
EMA + +
Sbjct: 139 EMAPESL 145
>gi|146423462|ref|XP_001487659.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 228 VAIALESAMF-EKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
VA +E +F +++ + Y+ K R + NL++ KNPD R ++L GQ+ P + M
Sbjct: 79 VARNIELGVFKQEYSAVNDAYRNKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNPN 138
Query: 287 EMASDEM 293
EMA + +
Sbjct: 139 EMAPESL 145
>gi|322712025|gb|EFZ03598.1| transcription elongation factor S-II [Metarhizium anisopliae ARSEF
23]
Length = 300
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 224 DSVRVAIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
D + A+A+E A+F ++ +G YK K R++ NLK N D ++V+ G + PE
Sbjct: 162 DVIARAVAVEHAVFIEFKEDEGEGYKKKIRSLFANLKTKSNKDLGKRVMSGDISPEKFAK 221
Query: 283 MTAKEMASDE 292
MT +E+ S++
Sbjct: 222 MTDEELKSED 231
>gi|302309342|ref|NP_986676.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|299788313|gb|AAS54500.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|374109927|gb|AEY98832.1| FAGR011Wp [Ashbya gossypii FDAG1]
Length = 304
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE--KWGRSDGPYK 248
D R++V DAL+K S + I + +AI +E M++ G ++ YK
Sbjct: 141 DKLRDMVIRAFYDALAKESEHPPQSI---------LAIAIDIEKHMWQLNDPGENEKAYK 191
Query: 249 IKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
KYR + N+ N D + K+ G + PE +V KE+A + +
Sbjct: 192 DKYRVIYSNVISKNNRDLKHKITNGDITPEYLVNCDPKELAPEHL 236
>gi|444520653|gb|ELV13035.1| PHD finger protein 3 [Tupaia chinensis]
Length = 1690
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
D R+ VR + D L K +++ ++ +E A +VA +E +F + +D YK K
Sbjct: 640 DQIRQSVRHSLKDILMKRLTDSNLKVPEEKAA----KVATKIEKELFSFFRDTDAKYKNK 695
Query: 251 YRAVLGNLKDPKN 263
YR+++ NLKDPKN
Sbjct: 696 YRSLMFNLKDPKN 708
>gi|149638336|ref|XP_001515301.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Ornithorhynchus
anatinus]
Length = 359
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VR K A+ + G + D+ ++A +E ++ + ++ YK R+ +
Sbjct: 181 VRHK---AVGLLHGALTDSSSDQSKVDQGQKLAREIEEHIYALYSKTIKKYKNCIRSKVS 237
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
NL++PKN ++ + G + PE MT +MASDE+ R
Sbjct: 238 NLRNPKNVHLQQNLFSGSLTPEAFAEMTVMDMASDELKR 276
>gi|342878267|gb|EGU79622.1| hypothetical protein FOXB_09905 [Fusarium oxysporum Fo5176]
Length = 315
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D + A+A+E A + K+ YK K R++ NLK+ N + R VL G++ E V M
Sbjct: 170 DVITRAVAVEHAAYTKFKGETPDYKKKIRSLFTNLKNKSNRELGRSVLSGEITAEKFVIM 229
Query: 284 TAKEMASDE 292
T E+ S+E
Sbjct: 230 TDDELKSEE 238
>gi|322694712|gb|EFY86534.1| transcription elongation factor s-ii [Metarhizium acridum CQMa 102]
Length = 303
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 224 DSVRVAIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
D + A+A+E A+F ++ +G YK K R++ NLK N D ++V+ G + PE
Sbjct: 162 DVIARAVAVEHAVFVEFKEDEGEGYKKKIRSLFANLKTKSNKDLGKRVMSGDILPEKFAK 221
Query: 283 MTAKEMASDE 292
MT +E+ S++
Sbjct: 222 MTDEELKSED 231
>gi|225683287|gb|EEH21571.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb03]
gi|226288233|gb|EEH43745.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb18]
Length = 306
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 220 VNACDSVRV----AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+N+ + RV A +E+A + +G + Y+ K R++ NLK+ NP R +VL +
Sbjct: 161 LNSTEPPRVVLQKATEVEAAAYRAFGPETKEQYRTKMRSLFQNLKNKSNPGLRIRVLSNE 220
Query: 275 VKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
V E V MT E+ SD + EE R+ KE+ K M
Sbjct: 221 VTAERFVRMTHDELKSDA-------QREEERRIQKENMDKAM 255
>gi|355723573|gb|AES07935.1| transcription elongation factor A N-terminal and central domain
containing [Mustela putorius furo]
Length = 146
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F ++ YKI R+ + NLK+P N ++ +L G P MTA E
Sbjct: 34 LAREIEGHLFTLHSKNLRKYKICVRSKVANLKNPHNSHLQQNLLSGTTSPREFAEMTALE 93
Query: 288 MASDEM 293
MAS+E+
Sbjct: 94 MASEEL 99
>gi|295672377|ref|XP_002796735.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283715|gb|EEH39281.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 306
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 220 VNACDSVRV----AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+N+ + RV A +E+A + +G + Y+ K R++ NLK+ NP R +VL +
Sbjct: 161 LNSTEPPRVVLQKATEVEAAAYRAFGPETKEQYRTKMRSLFQNLKNKSNPGLRIRVLSNE 220
Query: 275 VKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
V E V MT E+ SD + EE R+ KE+ K M
Sbjct: 221 VTAERFVRMTHDELKSDA-------QREEERRIQKENMDKAM 255
>gi|255713242|ref|XP_002552903.1| KLTH0D04136p [Lachancea thermotolerans]
gi|238934283|emb|CAR22465.1| KLTH0D04136p [Lachancea thermotolerans CBS 6340]
Length = 293
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWGRSDGPY 247
N R++V DAL+K S + I + AIA+E + ++ Y
Sbjct: 129 NHKLRDMVIRAFYDALAKESEHPPQSI---------LTTAIAIEKELNKVNNCELNEKAY 179
Query: 248 KIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
K KYR V N+ NPD + ++ G V PE +V KE+A + + + ++EE AR
Sbjct: 180 KDKYRVVYANVISKNNPDLKHRITGGDVSPEYLVNCDPKELAPEHL----KKKNEEIAR 234
>gi|213404362|ref|XP_002172953.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
gi|212001000|gb|EEB06660.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
Length = 698
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 224 DSVRVAIALESAMF-EKWGRSDG------PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVK 276
D V A+ LE MF E + DG Y+ K+R + NL D +NP R + G++
Sbjct: 203 DLVEFALQLERTMFIELSYKIDGNAIPNKAYRDKFRNIKFNLTDDRNPHLRASLFKGEIT 262
Query: 277 PETVVGMTAKEMASDEMLRSYQHEDEERA---RLWKEH----TRKY 315
P +V MT++EMA+ + L+ + + +++ + KEH RKY
Sbjct: 263 PVQLVHMTSEEMANPD-LKVFAEQIRQQSTENTILKEHHIPKPRKY 307
>gi|189201055|ref|XP_001936864.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983963|gb|EDU49451.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 905
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACD-SVRVAIALESAMFEKWGRSDG---PYKIK 250
E +RE + ++ S I D A + + + + A FE +G G PY K
Sbjct: 327 EKLRETLTPLINAASDSRGYRIPDGQTAKSLATKYTLQMSHAAFELYGEPTGGSSPYFNK 386
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSY 297
+R ++ N+K KN ++L G +K +VGM A+EMAS++ R Y
Sbjct: 387 FRTIMFNVK--KNTLLVDRLLSGSLKAGDLVGMEAEEMASEDKQREY 431
>gi|326913628|ref|XP_003203138.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Meleagris gallopavo]
Length = 381
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F ++D YK R+ + NLK+PK+ + + + G + P+ MT EMASD
Sbjct: 235 IEEHVFALHSKNDRKYKNCIRSKISNLKNPKSCNLKHNLFSGTLSPKAFAEMTVMEMASD 294
Query: 292 EM 293
E+
Sbjct: 295 EL 296
>gi|149244436|ref|XP_001526761.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449155|gb|EDK43411.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 322
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 226 VRVAIALESAMFE-KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
V VA +ESA+F+ ++ + + Y+ K R + L++ KNP+ R ++L Q+ E + M+
Sbjct: 186 VAVAAEIESAVFKNEYLKVNEAYRNKLRTFVMQLRNKKNPELRERLLTRQITAERFIKMS 245
Query: 285 AKEMASDEM 293
EMA +E+
Sbjct: 246 PNEMAPEEL 254
>gi|150864771|ref|XP_001383742.2| hypothetical protein PICST_57286 [Scheffersomyces stipitis CBS
6054]
gi|149386027|gb|ABN65713.2| transcription elongation factor S-IIMeiotic DNA recombination
factor (STP-alpha) [Scheffersomyces stipitis CBS 6054]
Length = 294
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 226 VRVAIALESAMFE-KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+ VA +ES +F+ ++ + Y+ K R NL++ KNP+ R ++L G +KP + M+
Sbjct: 158 LSVAREIESEVFKSEYSNVNDNYRNKLRTFTMNLRNKKNPELRERLLSGGIKPAEFIKMS 217
Query: 285 AKEMASDEM 293
EMA + +
Sbjct: 218 PNEMAPEAL 226
>gi|259146459|emb|CAY79716.1| Dst1p [Saccharomyces cerevisiae EC1118]
Length = 309
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 86/224 (38%), Gaps = 52/224 (23%)
Query: 71 IQDFASDLIVSWRDMFLEQIRD---EKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVG 127
I +I SW+D + R ++ PG+ E DK T E
Sbjct: 61 ISKLVKKMISSWKDAINKNKRSRQAQQHHQDHAPGNAE-------DKTTVGE-------- 105
Query: 128 IVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKI 187
V V Q ++S S + + + V T+ NS + +G + I HKL
Sbjct: 106 --SVNGVQQPASSQSDAMKQDKYVSTKPRNSKN----------DGVDTAIYHHKL----- 148
Query: 188 RCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWGRSDG 245
C+ + + D L+K S + I + A A+ES M ++
Sbjct: 149 -CDQVLKALY-----DVLAKESEHPPQSI---------LHTAKAIESEMNKVNNCDTNEA 193
Query: 246 PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
YK +YR + N+ NPD + K+ G + PE + AK++A
Sbjct: 194 AYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 237
>gi|432094051|gb|ELK25843.1| Death-inducer obliterator 1 [Myotis davidii]
Length = 1848
Score = 45.4 bits (106), Expect = 0.037, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 183 SSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGR 242
S++ + N R+ +R + + L K + ++D+ + E + +VA +E MF +
Sbjct: 299 STTPSQPNSQIRQNIRRSLKEILWKRASDSDDLMMTE---SEVGKVAFHIEKEMFNLFHV 355
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
+D YK KYR+++ NLKDPKN + Q +T V A
Sbjct: 356 TDNRYKSKYRSIMFNLKDPKNQVMESRARLHQESKKTAVRQEA 398
>gi|294656076|ref|XP_458316.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
gi|199430838|emb|CAG86394.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
Length = 290
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 228 VAIALESAMFE-KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
V+ +E+ +F+ ++ + Y+ K R NL++ KNPD R ++L ++KP + MT
Sbjct: 156 VSRDIENEVFKAEYSSVNDNYRNKLRTFTMNLRNKKNPDLRDRLLTNKIKPSNFIKMTPN 215
Query: 287 EMASDEM 293
EMA + +
Sbjct: 216 EMAPESL 222
>gi|339245691|ref|XP_003374479.1| transcription elongation factor S-II [Trichinella spiralis]
gi|316972266|gb|EFV55949.1| transcription elongation factor S-II [Trichinella spiralis]
Length = 347
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLG 256
VREK C + S E D E++ R+A +E ++ + + Y R+ +
Sbjct: 185 VREK-CRQMLLKSLEPDLN-SPEISVLTRERLAAEIEQEIYSLFNNTGDRYCACVRSRVF 242
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NL+D KNPD +R VL G++ + MT++EMAS+ +
Sbjct: 243 NLRDKKNPDLKRSVLSGEITAIRLATMTSEEMASEAL 279
>gi|119195887|ref|XP_001248547.1| hypothetical protein CIMG_02318 [Coccidioides immitis RS]
Length = 324
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 220 VNACDSVRV----AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+N+ +S R +I +E+A + +G + Y+ K R++ NL++ NP R +VL +
Sbjct: 158 LNSTESPRTVLQKSIEVEAAAYSVFGPETKEQYRTKIRSLYQNLRNKSNPALRVRVLSNE 217
Query: 275 VKPETVVGMTAKEMASDE 292
+ P+ V MT E+ SDE
Sbjct: 218 IAPDKFVRMTHDELKSDE 235
>gi|431909796|gb|ELK12942.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Pteropus alecto]
Length = 352
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F + ++ YK R+ + NLK+PKN ++ +L G + P MT E
Sbjct: 202 LAREIEGHIFTLYSKNLKKYKACIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVME 261
Query: 288 MASDEM 293
MAS+E+
Sbjct: 262 MASNEL 267
>gi|328351440|emb|CCA37839.1| Transcription elongation factor A protein 2 .l [Komagataella
pastoris CBS 7435]
Length = 329
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 244 DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
D Y+ K R+++ NLK+ NP RR +L ++ P +V M+A+E+A D +
Sbjct: 212 DDTYRNKLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSL 261
>gi|367043846|ref|XP_003652303.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
gi|346999565|gb|AEO65967.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 229 AIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A+ +E+A F + D P Y+ K R ++ +LK NP+ R+VL G++ PE V MT E
Sbjct: 162 AMEVEAAAFAVY--KDTPEYRSKIRGLMTSLKRKDNPELGRRVLGGEITPEKFVVMTDDE 219
Query: 288 MASD 291
+AS+
Sbjct: 220 LASE 223
>gi|254569920|ref|XP_002492070.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
gi|238031867|emb|CAY69790.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
Length = 285
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 244 DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
D Y+ K R+++ NLK+ NP RR +L ++ P +V M+A+E+A D +
Sbjct: 168 DDTYRNKLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSL 217
>gi|47200172|emb|CAF87330.1| unnamed protein product [Tetraodon nigroviridis]
Length = 255
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 21/79 (26%)
Query: 236 MFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA---------- 285
++++ +D YK + R+ + NLKDPKNP R+ VL G + + M+A
Sbjct: 111 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEVGAARPDRS 170
Query: 286 -----------KEMASDEM 293
KEMASDE+
Sbjct: 171 GAPPFHVCVSTKEMASDEL 189
>gi|156102921|ref|XP_001617153.1| transcription elongation factor [Plasmodium vivax Sal-1]
gi|148806027|gb|EDL47426.1| transcription elongation factor, putative [Plasmodium vivax]
Length = 435
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 121/282 (42%), Gaps = 32/282 (11%)
Query: 35 IDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEK 94
I+ L L +I +L T++ + T+ ++IQ+ A DL+ W+++ +++
Sbjct: 88 IEDLISLKDVEINKDILKQTKIGVTVNKFTKIKNEEIQNVAKDLVDKWKNIAIKE----- 142
Query: 95 KGSCTIPGDTEPAKIEK---VDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIV 151
K S T E K K V+ + C E + VKV+ V ++S + +
Sbjct: 143 KHSSTGSRSAESLKKRKSELVEGSDNNTCSEDYELKKVKVKNVSEHSAKQGT-IQSGSPN 201
Query: 152 ETEETNSADNVNVG-NSITEEGEASGIILHKLSSSKIR-------------CNDCFR-EV 196
E N AD++ + ++ G + + S+++ N F +V
Sbjct: 202 HGEPNNKADHLLFSKHHNSDHLPIKGSVQNSYHFSELKHVNTDLKALTEWNYNGKFHNDV 261
Query: 197 VREKVCDALSK--VSGEADEEI----RDEVNACDSVRVAIALESAMFEKWGRSDGPYKIK 250
+R+K L K ++G D + R ++N + L EK +S Y ++
Sbjct: 262 LRDKAKQFLFKAFITGSDDNLLYLIDRKKLNDI-IYNIENELHKFFIEK-KQSQKEYNMQ 319
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
+++ NL D KNP F K+ + P T+ M ++EMASDE
Sbjct: 320 LKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDE 361
>gi|58268784|ref|XP_571548.1| positive transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113304|ref|XP_774677.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257321|gb|EAL20030.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227783|gb|AAW44241.1| positive transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 349
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 110/284 (38%), Gaps = 37/284 (13%)
Query: 35 IDALDQLNKSDITCPLLVSTQ--------LVR------YLLPLTEHPTKKIQDFASDLIV 80
++A +Q KSD LL Q L+R + L H T + A +++
Sbjct: 13 LNAANQAGKSDEVISLLKKLQAEVVPTEDLLRSSKAGVAVGKLRTHATPSVSSLAKEIVK 72
Query: 81 SWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTS 140
WRD E + K+ D + K E KR E + + D +
Sbjct: 73 KWRDAVEETKKKRKRAEGDEGKDVKKEKEEGNGKRVKAES--MCALSPAAESGSDTHIHF 130
Query: 141 SSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREK 200
++ ++ + T + S +V + + L + SS+ R +
Sbjct: 131 AAGSLAATPSASTPASASTPDVKATSPPVRQP------LSTIDSSRT----TPRTAKSDG 180
Query: 201 VCDALSKVSGEAD--EEIRD-------EVNACDSV-RVAIALESAMFEKWGRSDG-PYKI 249
V D+L S E + +RD + A DS AI +E A + S G Y+
Sbjct: 181 VADSLRADSSEGGSVDSVRDKCVIMIYDALALDSTAERAIGIERAANKAMNFSTGNDYRA 240
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
K R++ NLKD NP R +++ G V E V M+ EMAS+ +
Sbjct: 241 KMRSLFLNLKDKGNPALRNEIVLGYVSTEKVASMSKDEMASESV 284
>gi|392572626|gb|EIW65771.1| hypothetical protein TREMEDRAFT_72529 [Tremella mesenterica DSM
1558]
Length = 335
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 212 ADEEIRDE-----VNAC---DSVRVAIALESAMF-EKWGRSDGPYKIKYRAVLGNLKDPK 262
DE +RD+ NA + ++A+E+A+F ++ +S Y+ K R++ NLKD
Sbjct: 183 GDESVRDKCVEMIYNALAGDSTAERSVAIEAAVFKQQKSQSGNEYRAKMRSLFLNLKDKG 242
Query: 263 NPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NP R +++ G + E + ++ ++MAS+ +
Sbjct: 243 NPGLRNEIVLGYLTAEKLASLSKEDMASESI 273
>gi|321260424|ref|XP_003194932.1| positive transcription elongation factor [Cryptococcus gattii
WM276]
gi|317461404|gb|ADV23145.1| positive transcription elongation factor, putative [Cryptococcus
gattii WM276]
Length = 333
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 229 AIALESAMFEKWGRSDG-PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
AI +E A + S G Y+ K R++ NLKD NP R +++ G + E V M+ E
Sbjct: 206 AIGIERAANKSMNFSTGNDYRAKMRSLFLNLKDKGNPALRNEIVLGYISTEKVASMSKDE 265
Query: 288 MASDEM 293
MAS+ +
Sbjct: 266 MASESV 271
>gi|392340808|ref|XP_003754176.1| PREDICTED: SPOC domain-containing protein 1-like [Rattus
norvegicus]
Length = 663
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 197 VREKVCDALSKVSGEADEEIRD-EVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVL 255
VR V A+ +V +E+ + E+ + +A +E+A+F ++ YK KYR +L
Sbjct: 56 VRSTVVRAMQEVLWTRTQELPNLELREDEVEGIAEGIEAALFHLTQDTNLRYKSKYRNLL 115
Query: 256 GNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
NL+DP+N D KV V P+ +V M++ ++A E+ R
Sbjct: 116 FNLRDPRN-DLFLKVAHCDVTPKDLVQMSSIQLAPKELSR 154
>gi|66361609|ref|XP_627328.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
gi|46228708|gb|EAK89578.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
Length = 332
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 135 DQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFR 194
DQN +S++ + +S +T++ + N V N EE + I LHK + + D R
Sbjct: 106 DQNVSSTAKKLKQSAENKTKDIQESQN-QVKNETKEEIKEEEI-LHKEYTGPL-TGDVMR 162
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW----GRSDGPYKIK 250
+ R + A+ + ++ E C+ +A +ES + ++ S Y ++
Sbjct: 163 DKARHFLWKAMVTGVPYSQAKLMKESQVCE---IAAEIESVLHREYIVKGDNSVRDYNLQ 219
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+ + NL D KNP+ K+ G++ PE + M ++EMASD
Sbjct: 220 LKTIKWNLSDLKNPELNSKLYVGKITPEEIARMQSREMASD 260
>gi|315046468|ref|XP_003172609.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
gi|311342995|gb|EFR02198.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
Length = 297
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 229 AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A +E+A F+ +G + Y+ K R++ NLK+ N R +VL ++ P+ V MT E
Sbjct: 165 ATEVEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRTRVLTNEIAPDRFVNMTHDE 224
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ SDE EE ++ KE+ K M
Sbjct: 225 LKSDE-------RREEDLKIQKENMDKAM 246
>gi|303321710|ref|XP_003070849.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110546|gb|EER28704.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320040335|gb|EFW22268.1| transcription elongation factor S-II [Coccidioides posadasii str.
Silveira]
gi|392862246|gb|EAS37125.2| transcription elongation factor S-II [Coccidioides immitis RS]
Length = 303
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 220 VNACDSVRV----AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+N+ +S R +I +E+A + +G + Y+ K R++ NL++ NP R +VL +
Sbjct: 158 LNSTESPRTVLQKSIEVEAAAYSVFGPETKEQYRTKIRSLYQNLRNKSNPALRVRVLSNE 217
Query: 275 VKPETVVGMTAKEMASDE 292
+ P+ V MT E+ SDE
Sbjct: 218 IAPDKFVRMTHDELKSDE 235
>gi|395840531|ref|XP_003793109.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Otolemur garnettii]
Length = 352
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F ++ ++ YK R+ + NLK+P+N ++ +L G + P MT EMA++
Sbjct: 206 IEEHIFTRYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGALSPREFAEMTVMEMANE 265
Query: 292 EM 293
E+
Sbjct: 266 EL 267
>gi|67588103|ref|XP_665338.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis
TU502]
gi|54655975|gb|EAL35108.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis]
Length = 332
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
LHK + + D R+ R + A+ + ++ E C+ +A +ES +
Sbjct: 148 LHKEYTGPL-TGDVMRDKARHFLWKAMVTGVPYSQAKLMKESQVCE---IAAEIESVLHR 203
Query: 239 KW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
++ S Y ++ + + NL D KNP+ K+ G++ PE + M ++EMASD
Sbjct: 204 EYIVKGDNSVRDYNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIARMQSREMASD 260
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
N+ R+ +R + D L K ++D+ ++ + R+A A+E MF +D YK
Sbjct: 635 NNQMRQNIRRSLTDILYKRVSDSDDL---KMTESEVARLAFAIEKEMFNLCLNTDSKYKR 691
Query: 250 KYRAVLGNLKDPK 262
KYR+++ NLKDPK
Sbjct: 692 KYRSLMFNLKDPK 704
>gi|392348387|ref|XP_003750093.1| PREDICTED: SPOC domain-containing protein 1-like [Rattus
norvegicus]
Length = 768
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+A+F ++ YK KYR +L NL+DP+N D KV V P+ +V M++ +
Sbjct: 193 IAEGIEAALFHLTQDTNLRYKSKYRNLLFNLRDPRN-DLFLKVAHCDVTPKDLVQMSSIQ 251
Query: 288 MASDEMLR 295
+A E+ R
Sbjct: 252 LAPKELSR 259
>gi|237841743|ref|XP_002370169.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|95007190|emb|CAJ20411.1| transcription elongation factor s-II, putative [Toxoplasma gondii
RH]
gi|211967833|gb|EEB03029.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|221482635|gb|EEE20973.1| transcription elongation factor, putative [Toxoplasma gondii GT1]
gi|221503171|gb|EEE28877.1| transcription elongation factor, putative [Toxoplasma gondii VEG]
Length = 418
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 224 DSVRVAIALESAMFEKW---GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETV 280
++ RVA +E A+++++ +S Y ++ + + N D KNPD KVL G PE +
Sbjct: 273 ETARVAAEIEKALWQEYCVRRKSTKEYNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQL 332
Query: 281 VGMTAKEMASDEMLRSYQHEDEE 303
M++ ++ASDE R + + +E
Sbjct: 333 AIMSSADLASDEKKRMRELQKKE 355
>gi|390597425|gb|EIN06825.1| transcription elongation factor [Punctularia strigosozonata
HHB-11173 SS5]
Length = 320
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 226 VRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
++ A +ES + ++ + YK K R+ NLKD NP R V+ G++ E MT+
Sbjct: 185 LKRARGIESDVLSQFRTTGAEYKAKIRSFFVNLKDKNNPGLRAAVVSGELPVEKFAKMTS 244
Query: 286 KEMASDE 292
+MAS+E
Sbjct: 245 ADMASEE 251
>gi|378733301|gb|EHY59760.1| transcription elongation factor S-II [Exophiala dermatitidis
NIH/UT8656]
Length = 306
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 228 VAIALESAMF---EKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
+A +ESA E G S P YK K R++ NLK+ NP R+++L G+V V M
Sbjct: 169 LAKEIESAALNLPEAKGSSSSPVYKDKIRSLYQNLKNKSNPGLRKRILSGEVTAVRFVSM 228
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
T +EM S + + EE ++ KE+ M
Sbjct: 229 THEEMKS-------KQQREEEIKIAKENMNNAM 254
>gi|393220677|gb|EJD06163.1| transcription elongation factor [Fomitiporia mediterranea MF3/22]
Length = 296
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 226 VRVAIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
++ A A+ES + E G YK K R++ NLKD NP R ++ G+++ M+
Sbjct: 160 LKRATAIESTVLEDHNNDTGKEYKGKIRSLFLNLKDKNNPGLRANIVSGELEVAKFCRMS 219
Query: 285 AKEMASDE 292
++EMAS+E
Sbjct: 220 SQEMASEE 227
>gi|401625778|gb|EJS43771.1| dst1p [Saccharomyces arboricola H-6]
Length = 309
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 32/161 (19%)
Query: 131 VQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILHKLSSSKIRCN 190
V + Q+S+ S + + V T+ NS + +G + I HKL
Sbjct: 107 VNSLGQHSSPQSDATKQDKYVSTKPRNSKN----------DGVDTAIYHHKL-------- 148
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWGRSDGPYK 248
R+ V + + D L+K S + I + A A+E M S+ YK
Sbjct: 149 ---RDQVLKALYDVLAKDSEHPPQSI---------LHTAKAIEDEMNKINNCDSSEALYK 196
Query: 249 IKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
+YR + N+ NPD + K+ G + PE + AK++A
Sbjct: 197 ARYRIIYSNIISKNNPDLKHKIANGDITPEFLATCDAKDLA 237
>gi|358387656|gb|EHK25250.1| hypothetical protein TRIVIDRAFT_81951 [Trichoderma virens Gv29-8]
Length = 304
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D + A+A+E+A F + YK K R++ NLK N D ++V+ G + P V M
Sbjct: 167 DVIAKAVAVENAAFTLFNGEGAEYKKKIRSLFSNLKSKTNRDLGKRVMSGDITPSRFVTM 226
Query: 284 TAKEMASDE 292
T +++ S++
Sbjct: 227 TDEDLKSED 235
>gi|444517013|gb|ELV11334.1| Death-inducer obliterator 1 [Tupaia chinensis]
Length = 1966
Score = 44.3 bits (103), Expect = 0.082, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
N R+ +R + + L K ++D+ I E RVA+ +E MF + +D YK
Sbjct: 677 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---RVALHIEKEMFSLFHVTDNRYKS 733
Query: 250 KYRAVLGNLKDPKN 263
KYR+++ NLKDPKN
Sbjct: 734 KYRSIMFNLKDPKN 747
>gi|449015636|dbj|BAM79038.1| similar to transcription elongation factor TFIIS.h [Cyanidioschyzon
merolae strain 10D]
Length = 691
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 228 VAIALESAMFEKW-GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
VA +ESA+FE + Y+ + R ++ NL+D +N + R V+ G + P T+ M ++
Sbjct: 232 VAYEIESALFELMDHKVHDDYRARLRNLVANLRDQRNDELREAVISGSISPSTLCQMNSE 291
Query: 287 EMASDEM 293
E+A E+
Sbjct: 292 ELACKEL 298
>gi|355784325|gb|EHH65176.1| Death-inducer obliterator 1 [Macaca fascicularis]
Length = 2156
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 179 LHKLSSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE 238
L +S++ + N R+ +R + + L K ++D+ I E ++A+ +E MF
Sbjct: 635 LGAMSAAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG---KIALHIEKEMFN 691
Query: 239 KWGRSDGPYKIKYRAVLGNLKDPKN 263
+ +D YK KYR+++ NLKDPKN
Sbjct: 692 LFQVTDNRYKSKYRSIMFNLKDPKN 716
>gi|350539011|ref|NP_001232124.1| putative transcription elongation factor A2 [Taeniopygia guttata]
gi|197129380|gb|ACH45878.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 229
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
D +A +E +++ +D YK + R+ + NLKD KNP+ ++ VL G + P G
Sbjct: 163 DCEHIAAQIEECIYQDVKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPRADCG 221
>gi|354543920|emb|CCE40642.1| hypothetical protein CPAR2_106770 [Candida parapsilosis]
Length = 300
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 226 VRVAIALESAMFE-KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+ +A +ES +F+ ++ + + Y+ K R+ NL++ KNP+ R +VL Q+ + MT
Sbjct: 164 ITIASEIESEVFKSEYSKVNDSYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMT 223
Query: 285 AKEMASDEM 293
EMA + +
Sbjct: 224 PNEMAPEAL 232
>gi|389586162|dbj|GAB68891.1| transcription elongation factor [Plasmodium cynomolgi strain B]
Length = 405
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 119/283 (42%), Gaps = 33/283 (11%)
Query: 35 IDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEK 94
I+ L L +I +L T++ + T+ ++IQ+ A DL+ W+++ +++
Sbjct: 54 IEDLILLKDVEINKDILKQTKIGVTVNKFTKIKNEEIQNVAKDLVDKWKNIAIKE--KHS 111
Query: 95 KGSCTIPGDTEPAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETE 154
S + K E V+ + C E + VKV+ + N S ++S+
Sbjct: 112 STSSRSAESLKKRKSELVETSDNHTCSEDYELKKVKVK--NDNEHKSEKGTIQSDNPNLR 169
Query: 155 ETNS-------------ADNVNVGNSITEEGEASGI--------ILHKLSSSKIRCNDCF 193
E N+ +DN+ + SI + S + L + + + ND
Sbjct: 170 EPNNKTDDLLLKSKHHNSDNLPIKGSIKNSYQFSELKHINTDLKALTEWNYNGKFHNDVL 229
Query: 194 REVVREKVCDALSKVSGEADEEI----RDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
R+ ++ + A ++G D + R ++N + L EK +S Y +
Sbjct: 230 RDKAKQFLFKAF--ITGSDDNLLYLIDRKKLNDI-IYNIENELHKFFIEK-KQSQKEYNM 285
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
+ +++ NL D KNP F K+ + P T+ M ++EMASDE
Sbjct: 286 QLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDE 328
>gi|224002418|ref|XP_002290881.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974303|gb|EED92633.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2469
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 228 VAIALESAMFEKWGRS-----DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
+A LE A+F+K+ RS Y+ K R++ NL+DPKNP +VL GQ+ ++
Sbjct: 2066 LASDLEQAIFDKF-RSPHDSISNEYRDKVRSLRFNLQDPKNPMLCARVLSGQLPISQLIV 2124
Query: 283 MTAKEMASDEMLRSYQHEDEE 303
M++ ++AS E+ + Q EE
Sbjct: 2125 MSSADLASKELKQIRQQVQEE 2145
>gi|169867242|ref|XP_001840202.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
gi|116498754|gb|EAU81649.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
Length = 298
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 208 VSGEADEEIRD-------EVNACDS-------VRVAIALESAMFEKWGRSDGPYKIKYRA 253
V+G +++RD + A DS ++ A +E A+F G ++ Y+ K R+
Sbjct: 131 VTGRTGDKVRDKCVELLYDALASDSTAPIEMVLKRASEVEEAVFNLKGGANQEYRGKIRS 190
Query: 254 VLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEE 303
+ NLKD NP + ++ G++ MT++EMAS+E + + EE
Sbjct: 191 LYVNLKDKNNPTLKEDIVSGEIPASRFAVMTSEEMASEEQKAALKKIHEE 240
>gi|398398099|ref|XP_003852507.1| hypothetical protein MYCGRDRAFT_59339, partial [Zymoseptoria
tritici IPO323]
gi|339472388|gb|EGP87483.1| hypothetical protein MYCGRDRAFT_59339 [Zymoseptoria tritici IPO323]
Length = 314
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 124/288 (43%), Gaps = 50/288 (17%)
Query: 7 QLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLTEH 66
QL E AK+ A+AA + + ++ L L T LL +++ + L ++
Sbjct: 8 QLHEVAKQIAKAADSGDPPSS------LLNILAPLETFKATEDLLRQSKIGVAVTKLRQN 61
Query: 67 PTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTEPAKIEKVDKRTSEECQEISGV 126
K+ + A+ L+ W+ ++++ +KK + P A + R+S
Sbjct: 62 KDPKVSETATRLVNRWK----QEVQSKKKRPDSSPAPANKALNGAANGRSSGTSSPAPNG 117
Query: 127 GIVKVQKVDQNSTSSSSNVVRSEIVETEETNS-ADNVNVGNSITEEGEASGIILHKLSSS 185
+V+K ++V R V+ E+ N+ AD V+ HK++
Sbjct: 118 SKSEVKK-------EPASVPRQSKVDPEKRNTGADGVD----------------HKITGD 154
Query: 186 KIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGR-SD 244
+R + C + + D ++ +S E+ + + + VA +E A FE + R ++
Sbjct: 155 AVR-DGCLKLMY-----DGIAFMSKESPDAV---------LTVARKVEVAAFEHFKRETN 199
Query: 245 GPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
YK K R++ NLK N R+ V ++ PE V MT++E+ S E
Sbjct: 200 AEYKTKMRSLFQNLKMRSNTLLRKNVFSEEIPPEKFVAMTSEELKSAE 247
>gi|448518329|ref|XP_003867941.1| Dst1 protein [Candida orthopsilosis Co 90-125]
gi|380352280|emb|CCG22505.1| Dst1 protein [Candida orthopsilosis]
Length = 300
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 226 VRVAIALESAMFE-KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+ +A +ES +F+ ++ + + Y+ K R+ NL++ KNP+ R +VL Q+ + MT
Sbjct: 164 ITIASEIESEVFKSEYSKVNDAYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMT 223
Query: 285 AKEMASDEM 293
EMA + +
Sbjct: 224 PNEMAPEAL 232
>gi|410953420|ref|XP_003983369.1| PREDICTED: death-inducer obliterator 1 [Felis catus]
Length = 2093
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEI--RDEVNACDSVRVAIALESAMFEKWGRSDGPY 247
N R+ +R + + L K ++D+ I +EV ++A+ +E +F + +D Y
Sbjct: 666 NSQIRQNIRRSLKEILWKRVNDSDDLIMTENEVG-----KIALHIEKELFNLFQVTDNRY 720
Query: 248 KIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
K KYR+++ NLKDPKN +VL ++ +V M +E+ S E+
Sbjct: 721 KSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 766
>gi|240277967|gb|EER41474.1| PHD finger domain-containing protein [Ajellomyces capsulatus H143]
Length = 851
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Query: 228 VAIALESAMFEKW-GRSDGP---YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
+ +A+E AM++ G S P YK + R +L N++ KN R +L G + P+T+ M
Sbjct: 323 LGVAIEHAMYKHLCGGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATM 380
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ ++MAS E+ Q +DE + +E R++M
Sbjct: 381 STQDMASKEL---RQKDDE----IKREAERQHM 406
>gi|325096028|gb|EGC49338.1| PHD finger domain-containing protein [Ajellomyces capsulatus H88]
Length = 896
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Query: 228 VAIALESAMFEKW-GRSDGP---YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
+ +A+E AM++ G S P YK + R +L N++ KN R +L G + P+T+ M
Sbjct: 323 LGVAIEHAMYKHLCGGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATM 380
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ ++MAS E+ Q +DE + +E R++M
Sbjct: 381 STQDMASKEL---RQKDDE----IKREAERQHM 406
>gi|225557325|gb|EEH05611.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 892
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Query: 228 VAIALESAMFEKW-GRSDGP---YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
+ +A+E AM++ G S P YK + R +L N++ KN R +L G + P+T+ M
Sbjct: 323 LGVAIEHAMYKHLCGGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATM 380
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ ++MAS E+ Q +DE + +E R++M
Sbjct: 381 STQDMASKEL---RQKDDE----IKREAERQHM 406
>gi|340914730|gb|EGS18071.1| putative transcription elongation factor [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 303
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 229 AIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A+ +E+A FE + + D P Y+ K R ++ +LK N + +V+ G++ P V MT KE
Sbjct: 171 AMEVEAAAFEVY-KGDTPEYRSKIRGLMTSLKRKDNAELGDRVMKGEITPHQFVKMTEKE 229
Query: 288 MASD-EMLRSYQHEDE 302
+AS+ + LR Q E E
Sbjct: 230 LASEAQRLRDAQLERE 245
>gi|395526959|ref|XP_003765621.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sarcophilus harrisii]
Length = 352
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
++A +E +F + ++ YK R+ L NLK+ KN ++ + G + P+ MT
Sbjct: 201 KLAKEIEGHIFALYSKNLKKYKNCIRSKLSNLKNQKNSHLQQNLFSGALSPKEFAEMTVM 260
Query: 287 EMASDEM 293
EMA+DE+
Sbjct: 261 EMANDEL 267
>gi|392559485|gb|EIW52669.1| transcription elongation factor [Trametes versicolor FP-101664 SS1]
Length = 306
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 97/248 (39%), Gaps = 46/248 (18%)
Query: 46 ITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCTIPGDTE 105
IT LL ++ + L +H +K++ D A +++ W+ ++ EK+ S G +
Sbjct: 35 ITESLLRESKAGLAVGKLRQHASKRVADLAKEIVRKWK----TEVEREKQAS---GGGAK 87
Query: 106 PAKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVG 165
A K + S S+ SN T T +A G
Sbjct: 88 AASNGKTS--------------------AAKKSVSAGSNAA---TPSTPVTPTASTSGSG 124
Query: 166 NSITEEGEASGIILHKLSSSKIR-CNDCFREVVREKVCDALSKVSGEADEEIRDEVNACD 224
+ + E A K KI D R+ E + DAL SG E++
Sbjct: 125 SKLNETRSA------KTDGVKIEYTGDKTRDKCAELIYDALVFDSGAPSEQV-------- 170
Query: 225 SVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+ A +E +F ++ YK K R++ NLKD NP R V+ G + M+
Sbjct: 171 -MTRAKDIEKTVFNDNSGANAAYKAKIRSLFVNLKDKNNPGLRESVVSGDLAIAKFCRMS 229
Query: 285 AKEMASDE 292
+++MAS+E
Sbjct: 230 SQDMASEE 237
>gi|50286491|ref|XP_445674.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524979|emb|CAG58585.1| unnamed protein product [Candida glabrata]
Length = 306
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 22/126 (17%)
Query: 181 KLSSSKIRC-----------NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVA 229
K SSKIR N+ R+ V + DAL+K S + I ++ +
Sbjct: 122 KFVSSKIRNTKNDGVDPNVHNNKLRDQVIRALYDALAKDSEHPPKSI---------LQTS 172
Query: 230 IALESAMFEKWGRS--DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
IA+E M + S + YK KYR + N+ NPD + K+ G + PE +V K+
Sbjct: 173 IAIEEEMHKLNDSSIKEKEYKDKYRVIYSNIISRNNPDLKVKIANGDLSPEQLVNSDPKD 232
Query: 288 MASDEM 293
+A + +
Sbjct: 233 LAPEHL 238
>gi|261203309|ref|XP_002628868.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239586653|gb|EEQ69296.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239608307|gb|EEQ85294.1| transcription elongation factor S-II [Ajellomyces dermatitidis
ER-3]
Length = 303
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 220 VNACDSVRV----AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+N+ + R+ AI +E A + G + Y+ K R++ NLK+ NP R +VL +
Sbjct: 158 LNSTEPPRIVLQKAIEVELAAYTCLGPETKEQYRTKMRSLFQNLKNKSNPGLRVRVLSNE 217
Query: 275 VKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
V E V MT E+ SD + EE R+ KE+ K M
Sbjct: 218 VTAEKFVRMTHDELKSDA-------QREEERRIHKENMDKAM 252
>gi|19075622|ref|NP_588122.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59800464|sp|Q9Y7V2.3|BYE1_SCHPO RecName: Full=Transcription factor bye1
gi|4539285|emb|CAB39909.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe]
Length = 721
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 224 DSVRVAIALESAMFEKWGRS-------DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVK 276
+S +A+ LE MF + + Y+ K+RA+ NL D KNP FR +VL ++
Sbjct: 248 NSTSLALQLEHIMFMVLSYTTDHSLTPNNKYREKFRALRFNLVDDKNPAFRARVLKNEIS 307
Query: 277 PETVVGMTAKEMASDEM 293
+V ++++EMA+ ++
Sbjct: 308 FNDLVNLSSEEMANPDL 324
>gi|61554104|gb|AAX46508.1| hypothetical protein MGC17403 [Bos taurus]
Length = 326
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+ +F ++ YK R+ + NLK+P+N ++ +L G + P MTA E
Sbjct: 227 LAQEIEAHVFALHPKNLQKYKTCIRSKVANLKNPRNSHLQQNLLSGTMSPREFAKMTAME 286
Query: 288 MASDEM 293
MAS E+
Sbjct: 287 MASQEL 292
>gi|19114535|ref|NP_593623.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe
972h-]
gi|1351227|sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName:
Full=TFIIS
gi|924620|gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
gi|12038919|emb|CAC19733.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
Length = 293
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 241 GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
G++ Y+ + R++ NLKD NP R VL ++ P+ + MT+ E+AS++
Sbjct: 173 GKTGSEYRNRMRSLYMNLKDKNNPKLRASVLRNEITPQRLSTMTSAELASED 224
>gi|91083709|ref|XP_969911.1| PREDICTED: similar to AGAP004866-PA [Tribolium castaneum]
gi|270007882|gb|EFA04330.1| hypothetical protein TcasGA2_TC014624 [Tribolium castaneum]
Length = 1612
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+++ +ES +++ +G + Y+ KYR+++ N+KD KN R++ + P +V ++ +
Sbjct: 853 ISLEIESQLYKCFGDTGQKYRNKYRSLIFNIKDIKNQTLWRRICEKTINPYQLVRLSPDD 912
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYMQRM 319
+AS E+ LW+E K+ M
Sbjct: 913 LASQELA------------LWRERETKHQLDM 932
>gi|194044760|ref|XP_001927509.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Sus scrofa]
gi|194044762|ref|XP_001927499.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Sus scrofa]
gi|194044764|ref|XP_001927522.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Sus scrofa]
gi|311275938|ref|XP_003134981.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
gi|311275940|ref|XP_003134982.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
gi|311275942|ref|XP_003134980.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Sus scrofa]
Length = 352
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
R A +E +F ++ YK R+ + NLK+P+N R +L G + P MT
Sbjct: 201 RFAQEIEECIFTLHAKNLKKYKTCIRSKIANLKNPRNSHLRENLLSGIMSPRAFAEMTVM 260
Query: 287 EMASDEM 293
+MAS E+
Sbjct: 261 DMASKEL 267
>gi|403255274|ref|XP_003920366.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Saimiri boliviensis
boliviensis]
gi|403255276|ref|XP_003920367.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Saimiri boliviensis
boliviensis]
gi|403255278|ref|XP_003920368.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Saimiri boliviensis
boliviensis]
Length = 350
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+PKN ++ + G + P+ MT EMA+
Sbjct: 204 IEEHVFALYSKNIKKYKTCIRSKVANLKNPKNSHLKQNLFSGTMSPQEFAEMTVMEMANK 263
Query: 292 EM 293
E+
Sbjct: 264 EL 265
>gi|400603045|gb|EJP70643.1| transcription elongation factor S-II [Beauveria bassiana ARSEF
2860]
Length = 309
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 217 RDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVK 276
R + D + ++A+E+A F + YK K R++ NLK+ N + V+ ++
Sbjct: 165 RSTASESDVLAKSVAVEAAAFAHFKGQGADYKKKIRSLFTNLKNKSNRALGQSVMASEIP 224
Query: 277 PETVVGMTAKEMASDE 292
PE V MT ++ SD+
Sbjct: 225 PERFVAMTDDDLKSDD 240
>gi|355559483|gb|EHH16211.1| TFIIS central domain-containing protein 1 [Macaca mulatta]
gi|355757190|gb|EHH60715.1| TFIIS central domain-containing protein 1 [Macaca fascicularis]
Length = 380
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+PKN ++ +L G + P MT EMA+
Sbjct: 234 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 293
Query: 292 EM 293
E+
Sbjct: 294 EL 295
>gi|164448538|ref|NP_001019643.2| transcription elongation factor A N-terminal and central
domain-containing protein [Bos taurus]
gi|117306417|gb|AAI26749.1| LOC504389 protein [Bos taurus]
gi|296470464|tpg|DAA12579.1| TPA: TFIIS central domain-containing protein 1 [Bos taurus]
Length = 378
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+ +F ++ YK R+ + NLK+P+N ++ +L G + P MTA E
Sbjct: 228 LAQEIEAHVFALHPKNLQKYKTCIRSKVANLKNPRNSHLQQNLLSGTMSPREFAKMTAME 287
Query: 288 MASDEM 293
MAS E+
Sbjct: 288 MASQEL 293
>gi|61679514|pdb|1Y1V|S Chain S, Refined Rna Polymerase Ii-tfiis Complex
gi|61679527|pdb|1Y1Y|S Chain S, Rna Polymerase Ii-Tfiis-DnaRNA COMPLEX
Length = 179
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWGRSDGPYKIK 250
+ +R++V AL V + E + + A A+ES M ++ YK +
Sbjct: 14 YHHKLRDQVLKALYDVLAKESEHPPQSI-----LHTAKAIESEMNKVNNCDTNEAAYKAR 68
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
YR + N+ NPD + K+ G + PE + AK++A
Sbjct: 69 YRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 107
>gi|348554565|ref|XP_003463096.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Cavia porcellus]
Length = 352
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 218 DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKP 277
D+ NA A +E +F + ++ YK R+ + NLK+P+N ++ +L G + P
Sbjct: 192 DQANADLWQNFAREIEECIFALYSKNIKKYKTCIRSKVANLKNPRNCHLQQNLLSGTISP 251
Query: 278 ETVVGMTAKEMASDEM 293
+ MT +MA+ E+
Sbjct: 252 KEFAEMTTMDMANKEL 267
>gi|325053992|pdb|3PO3|S Chain S, Arrested Rna Polymerase Ii Reactivation Intermediate
Length = 178
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWGRSDGPYKIK 250
+ +R++V AL V + E + + A A+ES M ++ YK +
Sbjct: 13 YHHKLRDQVLKALYDVLAKESEHPPQSI-----LHTAKAIESEMNKVNNCDTNEAAYKAR 67
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
YR + N+ NPD + K+ G + PE + AK++A
Sbjct: 68 YRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 106
>gi|75057265|sp|Q9GMV6.1|TEANC_MACFA RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
gi|9929973|dbj|BAB12143.1| hypothetical protein [Macaca fascicularis]
Length = 350
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+PKN ++ +L G + P MT EMA+
Sbjct: 204 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 263
Query: 292 EM 293
E+
Sbjct: 264 EL 265
>gi|224007775|ref|XP_002292847.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971709|gb|EED90043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 394
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 197 VREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALES---AMFEKWGRS-DGPYKIKYR 252
+R +C L + + ++ E+N ++ ++ A + W R Y K R
Sbjct: 214 LRINICKKLHTIFRMSQSDLSKELNESAVKQLCLSRAGEVEAAVDTWSRGVKQTYNEKVR 273
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQ 298
++ NLK KN R +V+ GQV PE +V MT++E+ +DE ++ +
Sbjct: 274 TLVFNLK--KNGPLRDRVILGQVTPERLVKMTSEELQTDEKAKAIE 317
>gi|402909518|ref|XP_003917464.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Papio anubis]
Length = 350
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+PKN ++ +L G + P MT EMA+
Sbjct: 204 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 263
Query: 292 EM 293
E+
Sbjct: 264 EL 265
>gi|255072159|ref|XP_002499754.1| predicted protein [Micromonas sp. RCC299]
gi|226515016|gb|ACO61012.1| predicted protein [Micromonas sp. RCC299]
Length = 181
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 228 VAIALESAMFEKWGRS--DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
+A A+E A+F + G D Y+ R + N++ +N RR+VL G++ PE + ++
Sbjct: 33 LARAVEQALFVRKGSDAKDPSYRSAARFLAANIR--RNGPLRRRVLDGELSPEALCELSP 90
Query: 286 KEMASDEMLRSYQHEDE 302
E+A+DEM R + +E
Sbjct: 91 DELATDEMKRKREKMEE 107
>gi|109129943|ref|XP_001096593.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 1 [Macaca
mulatta]
gi|297303341|ref|XP_002806188.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 2 [Macaca
mulatta]
Length = 350
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+PKN ++ +L G + P MT EMA+
Sbjct: 204 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 263
Query: 292 EM 293
E+
Sbjct: 264 EL 265
>gi|68072123|ref|XP_677975.1| transcription elongation factor [Plasmodium berghei strain ANKA]
gi|56498287|emb|CAH96309.1| transcription elongation factor s-ii, putative [Plasmodium berghei]
Length = 365
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 190 NDCFREVVREKVCDALSK--VSGEADEEIR-DEVNACDSVRVAIALE-SAMFEKWGRSDG 245
N + + +R+K L K ++G D + + N D++ I E +F + S
Sbjct: 185 NGKYHDALRDKAKQFLFKAFITGSHDNLLHLIDRNKLDNIIYNIENELYKIFIEKKNSQK 244
Query: 246 PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
Y ++ +++ NL D KNP+F K+ + T+ M +++MASDE
Sbjct: 245 EYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASDE 291
>gi|19074096|ref|NP_584702.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|19068738|emb|CAD25206.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|449329004|gb|AGE95279.1| transcription elongation factor sII [Encephalitozoon cuniculi]
Length = 257
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 216 IRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQV 275
I+ ++ C++ A+ E +GR+ R+ NLKD NP R+V G +
Sbjct: 114 IKTNISDCNNASAALLARQITIEIFGRNPSDIAKLIRSKCLNLKDKNNPALCRRVYNGDI 173
Query: 276 KPETVVGMTAKEMASDEM 293
P V M+++EM S+ +
Sbjct: 174 SPSRYVDMSSEEMKSESL 191
>gi|238589160|ref|XP_002391938.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
gi|215457296|gb|EEB92868.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
Length = 125
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 237 FEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
F G + Y+ + R++ NLKD NP R V+ G + + + M++ EMAS+E
Sbjct: 1 FNSHGGASTEYRARIRSLFVNLKDKNNPGLRESVVSGLIAADKLAKMSSAEMASEE 56
>gi|327349505|gb|EGE78362.1| transcription elongation factor S-II [Ajellomyces dermatitidis ATCC
18188]
Length = 373
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 220 VNACDSVRV----AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQ 274
+N+ + R+ AI +E A + G + Y+ K R++ NLK+ NP R +VL +
Sbjct: 228 LNSTEPPRIVLQKAIEVELAAYTCLGPETKEQYRTKMRSLFQNLKNKSNPGLRVRVLSNE 287
Query: 275 VKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
V E V MT E+ SD + EE R+ KE+ K M
Sbjct: 288 VTAEKFVRMTHDELKSDA-------QREEERRIHKENMDKAM 322
>gi|297709429|ref|XP_002831433.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pongo abelii]
gi|297709431|ref|XP_002831434.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pongo abelii]
Length = 351
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A +E +F + ++ YK R+ + NLK+PKN ++ +L G P MT E
Sbjct: 201 FAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTTSPREFAEMTVME 260
Query: 288 MASDEM 293
MA+ E+
Sbjct: 261 MANKEL 266
>gi|334346763|ref|XP_003341849.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Monodelphis domestica]
Length = 366
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
++A +E +F + ++ YK R+ + NLK+ KNP ++ + G + P+ MT
Sbjct: 215 KLAREIEEYIFVLYSKNLKKYKNCIRSKVSNLKNQKNPHLQQNLFSGTLSPKEFAEMTVM 274
Query: 287 EMASDEM 293
EMA++E+
Sbjct: 275 EMANEEL 281
>gi|412993729|emb|CCO14240.1| predicted protein [Bathycoccus prasinos]
Length = 157
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 214 EEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFG 273
E ++DE D VA A+ESA+F S+ YK K R + N K +N ++ VL G
Sbjct: 4 ESLKDETPLLD---VATAIESAVFH--NVSEVQYKSKIRFLCANFK--RNESVQKDVLSG 56
Query: 274 QVKPETVVGMTAKEMASDEM 293
+++P V+ M +E +DEM
Sbjct: 57 RIQPYDVLQMHDEEFMTDEM 76
>gi|159162262|pdb|1ENW|A Chain A, Elongation Factor Tfiis Domain Ii
Length = 114
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWGRSDGPYKIK 250
+ +R++V AL V + E + + A A+ES M ++ YK +
Sbjct: 18 YHHKLRDQVLKALYDVLAKESEHPPQSI-----LHTAKAIESEMNKVNNCDTNEAAYKAR 72
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
YR + N+ NPD + K+ G + PE + AK++A
Sbjct: 73 YRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 111
>gi|432109698|gb|ELK33774.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Myotis davidii]
Length = 352
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A +E +F + ++ YK R+ + NLK+P+N +R +L G + P MT +
Sbjct: 202 FAREIEEHVFTLYSKNLKKYKTCIRSKVANLKNPRNSHLQRNLLSGTMSPREFAEMTVMD 261
Query: 288 MASDEM 293
MAS E+
Sbjct: 262 MASKEL 267
>gi|154274572|ref|XP_001538137.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414577|gb|EDN09939.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 892
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 13/93 (13%)
Query: 228 VAIALESAMFEKW-GRSDGP---YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
+ +A+E +M++ G S P YK + R +L N++ KN R +L G + P+T+ M
Sbjct: 323 LGVAIEHSMYKHLCGGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATM 380
Query: 284 TAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ ++MAS E+ Q +DE + +E R++M
Sbjct: 381 STQDMASKEL---RQKDDE----IKREAERQHM 406
>gi|452979563|gb|EME79325.1| hypothetical protein MYCFIDRAFT_57652 [Pseudocercospora fijiensis
CIRAD86]
Length = 312
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 228 VAIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
VA +E A FE + P YK K R++ NLK N R+ V ++ P+ V MT+
Sbjct: 178 VARKVEVAAFEHFKHQTSPEYKAKMRSLYQNLKMKGNARLRKDVYSMEIMPKRFVAMTSD 237
Query: 287 EMASDEM 293
E+ S+EM
Sbjct: 238 ELKSEEM 244
>gi|351704572|gb|EHB07491.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 741
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYR 252
R+++R + + L K E+ + IR E + + AI LE MF + +D Y+ KYR
Sbjct: 236 LRQIIRHSLKEILWKRVCESGDLIRTEN---EVGKTAIRLEEEMFNLFRVTDHRYRSKYR 292
Query: 253 AVLGNLKDPKNPDFRRKV-LFGQVKPETV 280
+++ LKDP + D + + G++ P+TV
Sbjct: 293 SIMLRLKDPASQDLPDTIHIGGRIAPKTV 321
>gi|332223857|ref|XP_003261084.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Nomascus
leucogenys]
Length = 381
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + + YK R+ + NLK+PKN ++ +L G + P MT EMA+
Sbjct: 235 IEEHVFTLYSKDIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 294
Query: 292 EM 293
E+
Sbjct: 295 EL 296
>gi|332223859|ref|XP_003261085.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Nomascus
leucogenys]
gi|441673101|ref|XP_004092410.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Nomascus leucogenys]
Length = 351
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + + YK R+ + NLK+PKN ++ +L G + P MT EMA+
Sbjct: 205 IEEHVFTLYSKDIKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAEMTVMEMANK 264
Query: 292 EM 293
E+
Sbjct: 265 EL 266
>gi|426395182|ref|XP_004063854.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Gorilla gorilla
gorilla]
gi|426395184|ref|XP_004063855.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Gorilla gorilla
gorilla]
Length = 351
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+PKN ++ +L G P MT EMA+
Sbjct: 205 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNCHLQQNLLSGTTSPREFAEMTVMEMANK 264
Query: 292 EM 293
E+
Sbjct: 265 EL 266
>gi|116180542|ref|XP_001220120.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
gi|88185196|gb|EAQ92664.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
Length = 307
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
Y+ K R ++ +LK NP+ R+VL G + PE MT +E+ASD
Sbjct: 193 YRAKIRGLMTSLKRKDNPELGRRVLRGDIAPEKFAVMTDEELASD 237
>gi|451996314|gb|EMD88781.1| hypothetical protein COCHEDRAFT_30093 [Cochliobolus heterostrophus
C5]
Length = 875
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 10/112 (8%)
Query: 194 REVVREKVCDALSKVSGEADE----EIRD-EVNACDSVRVAIALESAMFEKWGRSDG--- 245
++ V EK+C+ L+ + A + I D E + + + + A F +G G
Sbjct: 300 QKAVAEKLCETLAPLITSASDTRGYRIPDGETAKSLASKYTLQMCHAAFNLYGEPTGGSS 359
Query: 246 PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSY 297
PY K R ++ N+K KN ++L G +K E +V M A+EMAS++ R Y
Sbjct: 360 PYFGKMRTIMFNVK--KNTVLVDRLLSGNLKAEDLVSMEAEEMASEDKQREY 409
>gi|358058917|dbj|GAA95315.1| hypothetical protein E5Q_01972 [Mixia osmundae IAM 14324]
Length = 330
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 232 LESAMFEKW-GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMAS 290
+E A+++ + G + G Y+ K R++L N KD KNP R V+ G++ + M A + +S
Sbjct: 198 VEEAVYKFYEGDTSGDYRQKTRSLLLNFKDKKNPALREAVVSGELSASKLASMKASDFSS 257
Query: 291 DE 292
+E
Sbjct: 258 EE 259
>gi|76154247|gb|AAX25738.2| SJCHGC09202 protein [Schistosoma japonicum]
Length = 229
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 187 IRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGP 246
+ ND R RE + AL SG A +S +AI +ES++++ + +D
Sbjct: 151 LTTNDQVRLKAREMLQSALE--SGNIPS------GAYESEFLAIRIESSIYDLFNNTDPQ 202
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFG 273
YK + R + NL+D NP+ R VL G
Sbjct: 203 YKQRVRTRVMNLRDSNNPNLRLNVLMG 229
>gi|324512512|gb|ADY45182.1| Transcription elongation factor A protein 3 [Ascaris suum]
Length = 256
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 184 SSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWG-R 242
S+K N+ EV+REK L K G + + + +A +E A+F + G
Sbjct: 123 STKGSDNNDDEEVIREKCIAMLLKCMGSSKK----------AEEIAKKVELAIFNEIGDA 172
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQH 299
+D Y+ + R+ + NL +NP +++L G + PE MTA+E+A+ ++ +H
Sbjct: 173 NDHKYRSRVRSRVANLT--RNPAIGKQILDGVISPEKFARMTAEELATPQLRELREH 227
>gi|426395180|ref|XP_004063853.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Gorilla gorilla
gorilla]
Length = 381
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+PKN ++ +L G P MT EMA+
Sbjct: 235 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNCHLQQNLLSGTTSPREFAEMTVMEMANK 294
Query: 292 EM 293
E+
Sbjct: 295 EL 296
>gi|70953587|ref|XP_745885.1| transcription elongation factor s-ii [Plasmodium chabaudi chabaudi]
gi|56526345|emb|CAH78009.1| transcription elongation factor s-ii, putative [Plasmodium chabaudi
chabaudi]
Length = 364
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 221 NACDSVRVAIALE-SAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPET 279
N D++ I E +F + S Y ++ +++ NL D KNP+F K+ + T
Sbjct: 218 NKLDNIIYNIENELYKIFIEKKNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISART 277
Query: 280 VVGMTAKEMASDE 292
+ M +++MASDE
Sbjct: 278 LATMNSQDMASDE 290
>gi|397468108|ref|XP_003805737.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pan paniscus]
gi|397468110|ref|XP_003805738.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Pan paniscus]
Length = 351
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+P+N ++ +L G P MT EMA+
Sbjct: 205 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANK 264
Query: 292 EM 293
E+
Sbjct: 265 EL 266
>gi|452836512|gb|EME38456.1| hypothetical protein DOTSEDRAFT_75850 [Dothistroma septosporum
NZE10]
Length = 313
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 40/172 (23%)
Query: 147 RSEIVETEETNS-ADNVNVGNSITEEGEASGIILHKLSSSKIRCNDCFREVVREKVCDAL 205
R V+ E+ N+ DNVN HK++ +R + C + + D +
Sbjct: 128 RKSTVDPEKRNTNTDNVN----------------HKVTGDAVR-DGCLKLMY-----DGI 165
Query: 206 SKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW-GRSDGPYKIKYRAVLGNLKDPKNP 264
+ +S E+ + + D VA +E A FE + ++ YK K R++ NLK N
Sbjct: 166 AFMSEESPDTVMD---------VARKVELAAFEHFKSETNQDYKAKMRSLFQNLKMKNNT 216
Query: 265 DFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHTRKYM 316
R+ V +++P V MT+ E+ S+E + +DEE L KE+ R+ M
Sbjct: 217 LLRKDVFTMKIEPTRFVTMTSDELKSEEK----RKKDEE---LEKENMRQAM 261
>gi|351702318|gb|EHB05237.1| Transcription elongation factor A and central domain-containing
protein [Heterocephalus glaber]
Length = 353
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 218 DEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKP 277
D+ NA A +E +F + ++ YK R+ + NLK+P+N ++ +L + P
Sbjct: 193 DQANADLWQNFAREIEEHIFTLYSKNIKKYKTCIRSKVANLKNPRNCHLQQNLLSRTMSP 252
Query: 278 ETVVGMTAKEMASDEM 293
+ MTA EMA+ E+
Sbjct: 253 KEFAEMTAMEMANKEL 268
>gi|335775536|gb|AEH58605.1| transcription elongation factor A N-terminal an central
domain-containing protein-like protein [Equus caballus]
Length = 353
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+PKN + +L G + P M+ EMAS
Sbjct: 207 IEEHVFALYSKNLKKYKTCIRSKVANLKNPKNSHLQENLLSGALSPREFAEMSVMEMASK 266
Query: 292 EM 293
E+
Sbjct: 267 EL 268
>gi|119619229|gb|EAW98823.1| hCG1798824 [Homo sapiens]
Length = 351
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+P+N ++ +L G P MT EMA+
Sbjct: 205 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANK 264
Query: 292 EM 293
E+
Sbjct: 265 EL 266
>gi|114687800|ref|XP_001135750.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pan troglodytes]
gi|114687802|ref|XP_520934.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Pan troglodytes]
Length = 351
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+P+N ++ +L G P MT EMA+
Sbjct: 205 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANK 264
Query: 292 EM 293
E+
Sbjct: 265 EL 266
>gi|158255978|dbj|BAF83960.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+P+N ++ +L G P MT EMA+
Sbjct: 205 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANK 264
Query: 292 EM 293
E+
Sbjct: 265 EL 266
>gi|239781978|pdb|3GTM|S Chain S, Co-Complex Of Backtracked Rna Polymerase Ii With Tfiis
Length = 173
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAM--FEKWGRSDGPYKIK 250
R+ V + + D L+K S + I + A A+ES M ++ YK +
Sbjct: 12 LRDQVLKALYDVLAKESEHPPQSI---------LHTAKAIESEMNKVNNCDTNEAAYKAR 62
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
YR + N+ NPD + K+ G + PE + AK++A
Sbjct: 63 YRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 101
>gi|397468106|ref|XP_003805736.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pan paniscus]
Length = 381
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+P+N ++ +L G P MT EMA+
Sbjct: 235 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANK 294
Query: 292 EM 293
E+
Sbjct: 295 EL 296
>gi|344288715|ref|XP_003416092.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Loxodonta africana]
Length = 353
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
+ A +E +F + + YK R+ + NLK+P+N ++ +L G + P MT
Sbjct: 202 KFAREIEEHIFALYSGNLKKYKTCIRSKVSNLKNPRNSHLQQNLLSGTMSPREFAAMTVL 261
Query: 287 EMASDEM 293
EMA+ E+
Sbjct: 262 EMANQEL 268
>gi|380476055|emb|CCF44922.1| transcription elongation factor S-II [Colletotrichum higginsianum]
Length = 302
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%)
Query: 217 RDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVK 276
R + D + A+A+E A F + Y+ K R++ NLK N V+ G++
Sbjct: 158 RSTASVTDVLAKAVAVEHAAFSHYKGVTKEYREKLRSLFSNLKVKSNRQLGVNVMEGKIA 217
Query: 277 PETVVGMTAKEMASDE 292
PE V MT +E+ S+E
Sbjct: 218 PERFVVMTHEELKSEE 233
>gi|401825902|ref|XP_003887045.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
gi|392998203|gb|AFM98064.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
Length = 253
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 214 EEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFG 273
E + ++ C + A + E +GR+ R+ NLKD NP R+V G
Sbjct: 108 EAFKTSISDCSNRHAAFLAKQITTEIFGRNPSDIAKLIRSKCLNLKDKNNPVLCRRVYDG 167
Query: 274 QVKPETVVGMTAKEMASDEM 293
++ P V MT++EM S+ +
Sbjct: 168 EISPSRYVDMTSEEMKSESL 187
>gi|114687798|ref|XP_001135670.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pan troglodytes]
Length = 381
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+P+N ++ +L G P MT EMA+
Sbjct: 235 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANK 294
Query: 292 EM 293
E+
Sbjct: 295 EL 296
>gi|117949797|sp|Q8N8B7.2|TEANC_HUMAN RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
Length = 351
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+P+N ++ +L G P MT EMA+
Sbjct: 205 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANK 264
Query: 292 EM 293
E+
Sbjct: 265 EL 266
>gi|444318181|ref|XP_004179748.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
gi|387512789|emb|CCH60229.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
Length = 308
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
N R++V + + DAL K S E+ I + + LE F ++ Y+
Sbjct: 144 NHKLRDMVVKALYDALVKDSTESSSLIL-------KLATEVELEMKKFSDPDVNEKQYRD 196
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
KYR V NL NP+ + +++ G V P +V KE+A + +
Sbjct: 197 KYRVVYSNLISKNNPELKFRIVGGDVSPARLVTCDPKELAPESL 240
>gi|194377496|dbj|BAG57696.1| unnamed protein product [Homo sapiens]
Length = 381
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+P+N ++ +L G P MT EMA+
Sbjct: 235 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANK 294
Query: 292 EM 293
E+
Sbjct: 295 EL 296
>gi|338729178|ref|XP_001489012.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Equus caballus]
Length = 381
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+PKN + +L G + P M+ EMAS
Sbjct: 235 IEEHVFALYSKNLKKYKTCIRSKVANLKNPKNSHLQENLLSGALSPREFAEMSVMEMASK 294
Query: 292 EM 293
E+
Sbjct: 295 EL 296
>gi|189054986|dbj|BAG37970.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+P+N ++ +L G P MT EMA+
Sbjct: 205 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANK 264
Query: 292 EM 293
E+
Sbjct: 265 EL 266
>gi|395329637|gb|EJF62023.1| transcription elongation factor [Dichomitus squalens LYAD-421 SS1]
Length = 300
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E + G ++ YK K R++ NLKD NP R V+ G++ + M++ +MAS+
Sbjct: 171 IEKTVLADNGGANANYKAKIRSLFVNLKDKNNPGLRECVISGELPVSKLCKMSSADMASE 230
Query: 292 E 292
E
Sbjct: 231 E 231
>gi|171473978|gb|AAW27827.2| SJCHGC09118 protein [Schistosoma japonicum]
Length = 309
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
YK R+ + NL++PKN R +L G + PE M+ +EMA++E+ R
Sbjct: 178 YKACIRSKVTNLRNPKNGHLRCGLLGGSLGPEVFARMSLEEMANEELQR 226
>gi|154146187|ref|NP_689847.2| transcription elongation factor A N-terminal and central
domain-containing protein [Homo sapiens]
Length = 381
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+P+N ++ +L G P MT EMA+
Sbjct: 235 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVMEMANK 294
Query: 292 EM 293
E+
Sbjct: 295 EL 296
>gi|115385046|ref|XP_001209070.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196762|gb|EAU38462.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 305
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
Y+ K R++ NLK+ NP R +VL +V PE V M+ E+ S E + E+ A+
Sbjct: 192 YRTKIRSLYQNLKNKSNPTLRVRVLSSEVTPEHFVKMSHDELRSAE-------QREQDAK 244
Query: 307 LWKEHTRKYM 316
+ K++ K M
Sbjct: 245 IQKQNMDKAM 254
>gi|308510188|ref|XP_003117277.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
gi|308242191|gb|EFO86143.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
Length = 308
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A+ +E ++ ++ Y R+ + NL+D KN R VL G V+ E M
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 284 TAKEMASDEM 293
T++EMAS E+
Sbjct: 231 TSEEMASPEI 240
>gi|118347836|ref|XP_001007394.1| hypothetical protein TTHERM_00361840 [Tetrahymena thermophila]
gi|89289161|gb|EAR87149.1| hypothetical protein TTHERM_00361840 [Tetrahymena thermophila
SB210]
Length = 574
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 227 RVAIALESAMFE------KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETV 280
++A+ +ES +F K+ + YK + + + +LKDP+N +FRRK+L Q+KP +
Sbjct: 350 KLAVEIESNLFNINNSHNKYALKEQ-YKNRCKILFVHLKDPQNFNFRRKILNKQMKPIQL 408
Query: 281 VGMTAKEMAS 290
+ +EM +
Sbjct: 409 CTINEQEMFN 418
>gi|17536493|ref|NP_495941.1| Protein T24H10.1 [Caenorhabditis elegans]
gi|1729914|sp|P52652.1|TFS2_CAEEL RecName: Full=Putative transcription elongation factor S-II;
AltName: Full=TFIIS
gi|3880168|emb|CAA90943.1| Protein T24H10.1 [Caenorhabditis elegans]
Length = 308
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A+ +E ++ ++ Y R+ + NL+D KN R VL G V+ E M
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKSYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 284 TAKEMASDEM 293
T++EMAS E+
Sbjct: 231 TSEEMASAEI 240
>gi|268532566|ref|XP_002631411.1| Hypothetical protein CBG03263 [Caenorhabditis briggsae]
Length = 305
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A+ +E ++ ++ Y R+ + NL+D KN R VL G V+ E M
Sbjct: 168 DPEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 227
Query: 284 TAKEMASDEM 293
T++EMAS E+
Sbjct: 228 TSEEMASPEI 237
>gi|119619230|gb|EAW98824.1| hCG2043271, isoform CRA_a [Homo sapiens]
Length = 230
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A +E +F + ++ YK R+ + NLK+P+N ++ +L G P MT E
Sbjct: 68 FAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVME 127
Query: 288 MASDEM 293
MA+ E+
Sbjct: 128 MANKEL 133
>gi|158293023|ref|XP_314320.4| AGAP004866-PA [Anopheles gambiae str. PEST]
gi|157016907|gb|EAA09679.4| AGAP004866-PA [Anopheles gambiae str. PEST]
Length = 2109
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 233 ESAMFEKWGRSDG-PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
E MF + + G Y+ KYR+++ N+KD KN +K+ ++P+ +V MTA E+AS
Sbjct: 1293 EREMFILFNKDTGMKYRAKYRSLVFNIKDRKNLSLFQKISEKLIEPKQLVRMTADELASQ 1352
Query: 292 EMLRSYQHEDEERARLWKEHTRKYMQRM 319
E+ + W+E K+ M
Sbjct: 1353 ELAQ------------WREKEAKHQLEM 1368
>gi|157115423|ref|XP_001652602.1| hypothetical protein AaeL_AAEL007181 [Aedes aegypti]
gi|108876924|gb|EAT41149.1| AAEL007181-PA, partial [Aedes aegypti]
Length = 1504
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 40/64 (62%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
Y+ KYR ++ N+KDPKN +K+ ++ + + MT +E+AS E+ + ++E++ +
Sbjct: 745 YRAKYRTLVFNIKDPKNLSLFQKICEKRIGAKQLARMTPEELASQELAQWRENENKHQLE 804
Query: 307 LWKE 310
+ K+
Sbjct: 805 MIKK 808
>gi|21756669|dbj|BAC04930.1| unnamed protein product [Homo sapiens]
Length = 217
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A +E +F + ++ YK R+ + NLK+P+N ++ +L G P MT E
Sbjct: 68 FAREIEEHVFTLYSKNIKKYKTCIRSKVANLKNPRNSHLQQNLLSGTTSPREFAEMTVME 127
Query: 288 MASDEM 293
MA+ E+
Sbjct: 128 MANKEL 133
>gi|296813901|ref|XP_002847288.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842544|gb|EEQ32206.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 867
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 232 LESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+E+ M++ G + YK + R +L N++ KNP R +L G+ P+++ M+ +
Sbjct: 344 IENCMYKNLCGSSGEPNDAYKTQLRTILFNVR--KNPSLRDSLLVGRTTPDSISTMSTQN 401
Query: 288 MASDEMLRSYQHEDEERAR-LWKEHT 312
MAS E+ + +DEE R ++HT
Sbjct: 402 MASQEL----REKDEEIKREAERQHT 423
>gi|348680251|gb|EGZ20067.1| hypothetical protein PHYSODRAFT_495059 [Phytophthora sojae]
Length = 118
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
Y K R +L NLKD +N D R +++ G++ ++V M ++MA+ +++R
Sbjct: 3 YAHKARTLLFNLKDSRNVDLRNRLVSGELPSHSLVRMNGRDMANPQLVR 51
>gi|344254957|gb|EGW11061.1| Death-inducer obliterator 1 [Cricetulus griseus]
Length = 803
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKN 263
++A+ +E MF + +D YK KYR+++ NLKDPKN
Sbjct: 740 KIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKN 776
>gi|71004188|ref|XP_756760.1| hypothetical protein UM00613.1 [Ustilago maydis 521]
gi|46095649|gb|EAK80882.1| hypothetical protein UM00613.1 [Ustilago maydis 521]
Length = 1137
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 14/108 (12%)
Query: 207 KVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGP-------YKIKYRAVLGNLK 259
K +G ADE+ +E + + A LE +F+ + G YK ++R L +LK
Sbjct: 391 KSTGAADED--EESDEQRAHSFASLLEEDLFDSNADTHGSIRVVGSKYKDRFRTFLFSLK 448
Query: 260 DPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARL 307
D KN ++ GQ++P + MT +E+A+D + ++ E+ARL
Sbjct: 449 DAKNTTLHSRISSGQLQPSELGKMTNEELANDSIRQAT-----EKARL 491
>gi|366987517|ref|XP_003673525.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
gi|342299388|emb|CCC67142.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
Length = 307
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRS--DGPY 247
ND R+ V + + DAL+K S I + ++E+ M++ S + Y
Sbjct: 143 NDKLRDSVVKALYDALAKESEHPPASI---------LHTVKSIENEMYKLNNPSINERQY 193
Query: 248 KIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
K KYR + N+ NPD + K+ + P+ +V KE+A
Sbjct: 194 KEKYRIIYSNIISKNNPDLKNKITNNDITPDYLVNCDPKELA 235
>gi|407919544|gb|EKG12774.1| Zinc finger PHD-type protein [Macrophomina phaseolina MS6]
Length = 885
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 184 SSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRS 243
+SK+R + ++++E GE E + R A+ +E+AM +
Sbjct: 287 ASKLRGD--LVKLIKEASKQGYQMADGETPESL--------GTRFALDIEAAMLKYHPAG 336
Query: 244 DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
Y ++R ++ NL P+N ++L G V P+ + M+A++MAS+E
Sbjct: 337 PAAYAQQFRNIVANL--PRNHSLLIQLLNGAVTPDQLATMSAEDMASEE 383
>gi|403178039|ref|XP_003336480.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375173311|gb|EFP92061.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 382
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
S+G YKIK R+++ NL+D NP R V+ G++ + M ++MAS+E
Sbjct: 265 SNG-YKIKMRSLIFNLRDKNNPGLRESVVSGEISASRLCVMGPQDMASEE 313
>gi|320588310|gb|EFX00779.1| transcription elongation factor s 2 [Grosmannia clavigera kw1407]
Length = 332
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
AI +E A F + Y+ K R++ NLK+ NP R+V+ G++ + V M++ E+
Sbjct: 200 AIEVEKAAFVVYKGETAEYRAKLRSLFQNLKNRSNPALGRRVVAGEIAADAFVVMSSDEL 259
Query: 289 ASDEM 293
S +
Sbjct: 260 KSAHL 264
>gi|302654552|ref|XP_003019080.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
gi|291182777|gb|EFE38435.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
Length = 833
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
R+ +E M+ G + YK + R +L N++ KNP R +L G+ P+ +
Sbjct: 309 RLGTEIEDCMYRNLCGSAGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 283 MTAKEMASDEMLRSYQHEDEERAR-LWKEHT 312
M+ + MAS E+ + +DEE R ++HT
Sbjct: 367 MSTQNMASQEL----REKDEEIKREAERQHT 393
>gi|327302438|ref|XP_003235911.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
gi|326461253|gb|EGD86706.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
Length = 832
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
R+ +E M+ G + YK + R +L N++ KNP R +L G+ P+ +
Sbjct: 310 RLGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 367
Query: 283 MTAKEMASDEMLRSYQHEDEERAR-LWKEHT 312
M+ + MAS E+ + +DEE R ++HT
Sbjct: 368 MSTQNMASQEL----REKDEEIKREAERQHT 394
>gi|303277747|ref|XP_003058167.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460824|gb|EEH58118.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 920
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
Y K R ++ NLKDP NP R +VL G++ P+ + ++ E+A ++
Sbjct: 195 YNAKARTLIFNLKDPSNPHLRGRVLRGELTPQVLCVLSPTELARKDL 241
>gi|359476965|ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
vinifera]
Length = 331
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 35 IDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEK 94
+D L L DIT L T + R++ L +HP+ ++ L+ W+D+ E ++
Sbjct: 129 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNP 188
Query: 95 KG----SCTIPGDTEPAKIEKV 112
G S + GD+ P KI +
Sbjct: 189 AGEFTSSALMEGDSPPQKIPRT 210
>gi|302510146|ref|XP_003017033.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
gi|291180603|gb|EFE36388.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
Length = 833
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
R+ +E M+ G + YK + R +L N++ KNP R +L G+ P+ +
Sbjct: 309 RLGTEIEDCMYRNLCGSAGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 283 MTAKEMASDEMLRSYQHEDEERAR-LWKEHT 312
M+ + MAS E+ + +DEE R ++HT
Sbjct: 367 MSTQNMASQEL----REKDEEIKREAERQHT 393
>gi|258575137|ref|XP_002541750.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902016|gb|EEP76417.1| predicted protein [Uncinocarpus reesii 1704]
Length = 888
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 86/192 (44%), Gaps = 19/192 (9%)
Query: 129 VKVQKVDQNSTSSSSNVVRSEIVETEETNSADNV-----NVGNSITEEGEASGIILHKLS 183
VK+Q++ S ++++ ++ ++ + + A + + S TE ASG+ H
Sbjct: 257 VKLQRLSTGSLPAATHEIKKSPAQSRKASMAGSAISHSSKLSKSPTEP-TASGV-GHLTQ 314
Query: 184 SSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW--- 240
+ K N + V + +++ G+ R+ C L M++
Sbjct: 315 ARKNVANAIIKLFVEQA---GVAQEQGKFSNSGRENERQCRRESGGSHLSKPMYQNLCGG 371
Query: 241 -GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQH 299
G + YK + R +L N++ KNP R +L G++ P+ M+ ++MAS+E+ Q
Sbjct: 372 SGEPNDAYKQQMRTILFNVR--KNPSLRDSLLVGRISPDAFSKMSTQDMASEEL---RQR 426
Query: 300 EDEERARLWKEH 311
+DE + ++H
Sbjct: 427 DDEIKREAERQH 438
>gi|452819596|gb|EME26652.1| transcription elongation factor S-II [Galdieria sulphuraria]
Length = 204
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 232 LESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMAS 290
+E +F+ + G Y+ ++R++ NLKD KN R VL + P+ V MT E+A+
Sbjct: 75 IEEELFKSCDKETGKDYQERFRSLYRNLKDAKNASLREAVLSRTILPKDFVVMTPHELAN 134
Query: 291 DEMLRSYQHEDEERARLWKEHTR 313
E+ +ER +L KE R
Sbjct: 135 PEL-------KKEREQLRKESIR 150
>gi|403215573|emb|CCK70072.1| hypothetical protein KNAG_0D03260 [Kazachstania naganishii CBS
8797]
Length = 309
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGR--SDGPYKIK 250
R+ V + DAL+K S + ++ A+ +E M + S+ YK K
Sbjct: 148 LRDSVVRALYDALAKDSEHPPSSV---------LQTAVDIEKEMNALYDHVTSEKQYKEK 198
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR V N+ NPD + K+ G + P+ VV KE+A + +
Sbjct: 199 YRIVYSNIISRNNPDLKFKITNGDLTPQFVVQCDPKELAPEHL 241
>gi|303388862|ref|XP_003072664.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
gi|303301806|gb|ADM11304.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
Length = 256
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 216 IRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQV 275
+ ++ C + A+ + E +GRS R+ NLKD NP R+V G +
Sbjct: 113 FKTNISDCCNRSAALLAKQITVEIFGRSPSDIAKLVRSKCLNLKDKNNPVLCRRVYDGDI 172
Query: 276 KPETVVGMTAKEMASDEM 293
P V MT++EM S+ +
Sbjct: 173 SPSRYVDMTSEEMKSENL 190
>gi|402218151|gb|EJT98229.1| transcription elongation factor [Dacryopinax sp. DJM-731 SS1]
Length = 311
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
S PY+ K R++ NLK+ NP R V+ G++ + M+ +EMAS+E
Sbjct: 193 SGNPYRTKIRSLYLNLKEKSNPGLREAVVSGELSVPRLCTMSVQEMASEE 242
>gi|326475222|gb|EGD99231.1| PHD finger domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 833
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
R+ +E M+ G + YK + R +L N++ KNP R +L G+ P+ +
Sbjct: 309 RLGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 283 MTAKEMASDEMLRSYQHEDEERAR-LWKEHT 312
M+ + MAS E+ + +DEE R ++HT
Sbjct: 367 MSTQNMASQEL----REKDEEIKREAERQHT 393
>gi|326479708|gb|EGE03718.1| PHD finger domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 833
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
R+ +E M+ G + YK + R +L N++ KNP R +L G+ P+ +
Sbjct: 309 RLGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 366
Query: 283 MTAKEMASDEMLRSYQHEDEERAR-LWKEHT 312
M+ + MAS E+ + +DEE R ++HT
Sbjct: 367 MSTQNMASQEL----REKDEEIKREAERQHT 393
>gi|401422690|ref|XP_003875832.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492072|emb|CBZ27346.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 337
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
++ +L N+KD KN + RRKV+ G++ E +V M E+A+ E+ R + + EER++
Sbjct: 223 FQTLLFNIKDTKNGELRRKVMEGELLVERLVTMDDLELANPELRRHIEEKIEERSK 278
>gi|74007121|ref|XP_537955.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Canis lupus familiaris]
Length = 348
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A +E +F ++ YK R+ + NL++PKN ++ +L G + P MT E
Sbjct: 198 FAREIEEHIFTLHSKNLKKYKTCVRSKVANLRNPKNSHLQQNLLSGTMSPREFAKMTVME 257
Query: 288 MASDEM 293
MA+ E+
Sbjct: 258 MANKEL 263
>gi|296234921|ref|XP_002807916.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
N-terminal and central domain-containing protein
[Callithrix jacchus]
Length = 382
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+E +F + ++ YK R+ + NLK+PKN ++ + G + P M+ EMA+
Sbjct: 236 IEEHVFTLYSKNIKKYKTCIRSKVANLKNPKNSHLKQNLFSGTMSPREFAEMSVMEMANK 295
Query: 292 EM 293
E+
Sbjct: 296 EL 297
>gi|170057596|ref|XP_001864553.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877015|gb|EDS40398.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 895
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 232 LESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMAS 290
+E MF + + G Y+ KYR+++ N+KD KN +K+ +++ +V MT +E+AS
Sbjct: 352 VEEEMFGMFNKDTGTKYRAKYRSLVFNIKDRKNLSLFQKICEKRIEARQLVRMTPEELAS 411
Query: 291 DEMLRSYQHEDEERARLWKE 310
E+ + ++E++ + + K+
Sbjct: 412 QELAQWRENENKHQLEMIKK 431
>gi|315040700|ref|XP_003169727.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
gi|311345689|gb|EFR04892.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
Length = 849
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 227 RVAIALESAMFEKW----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
R+ +E M+ G + YK + R +L N++ KNP R +L G+ P+ +
Sbjct: 325 RLGAEIEDCMYRNLCGSSGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAIST 382
Query: 283 MTAKEMASDEMLRSYQHEDEERAR-LWKEHT 312
M+ + MAS E+ + +DEE R ++HT
Sbjct: 383 MSTQNMASQEL----REKDEEIKREAERQHT 409
>gi|340375596|ref|XP_003386320.1| PREDICTED: PHD finger protein 3-like [Amphimedon queenslandica]
Length = 738
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
Y++K R++L NLKD KN +K+L G++ + +V M+ +++AS E+
Sbjct: 451 YRVKCRSLLFNLKDTKNEGLFKKILCGELSTKQLVRMSPEQLASREL 497
>gi|254585479|ref|XP_002498307.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
gi|238941201|emb|CAR29374.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
Length = 298
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
N R++V + DAL+K S + D + I E ++ YK
Sbjct: 134 NHKLRDMVIRALYDALAKESEHPPSSVLDSAKS-------IEEEMNKLNNCDENEKAYKD 186
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
KYR + N+ NPD + K+ G V + +V KE+A + +
Sbjct: 187 KYRIIYSNIISKNNPDLKHKITNGDVTSQYLVSCDPKELAPEHL 230
>gi|15225452|ref|NP_178987.1| transcription factor IIS-like protein [Arabidopsis thaliana]
gi|4558668|gb|AAD22686.1| hypothetical protein [Arabidopsis thaliana]
gi|330251155|gb|AEC06249.1| transcription factor IIS-like protein [Arabidopsis thaliana]
Length = 384
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 5 VMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLT 64
+++L E AK+ A+ A + K + CIDAL L K +IT +++ L LT
Sbjct: 264 MVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGLT 323
Query: 65 EHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCT 99
+H +KI AS L+ WR EQ E+K S T
Sbjct: 324 KHKDRKICHVASALLHLWRQRIREQ---ERKKSVT 355
>gi|449690494|ref|XP_002161127.2| PREDICTED: uncharacterized protein LOC100205379, partial [Hydra
magnipapillata]
Length = 1145
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 46/79 (58%)
Query: 232 LESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
+ES + + + ++ YK K R+++ NL+D +N ++V+ G++ P +V MT +++A+
Sbjct: 53 IESELLKLFVETNNKYKAKSRSLIFNLRDNQNKILYKRVVSGEITPYELVRMTPEQLATP 112
Query: 292 EMLRSYQHEDEERARLWKE 310
+ + + E + + K+
Sbjct: 113 ALAQWREQESKHHLEMVKK 131
>gi|302927325|ref|XP_003054473.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735414|gb|EEU48760.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 303
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 217 RDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVK 276
R + D + A+++E A + + YK K R++ NLK+ N D R+V+ G +
Sbjct: 159 RSTASESDVIAKAVSVEHAAYTRNKGETPEYKKKIRSLFTNLKNKSNKDLGRRVMSGDIS 218
Query: 277 PETVVGMTAKEMASDE 292
+ V MT E+ S++
Sbjct: 219 ADRFVVMTDDELKSED 234
>gi|296470438|tpg|DAA12553.1| TPA: TFIIS central domain-containing protein 1-like [Bos taurus]
Length = 377
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E+ +F ++ YK R+ + NLK P N ++ +L G + P MTA E
Sbjct: 227 LAQEIEAHVFALHPKNLQKYKTCIRSKVANLKKPHNSHLQQNLLSGTMSPREFAEMTAME 286
Query: 288 MASDEM 293
MAS E+
Sbjct: 287 MASQEL 292
>gi|67906720|gb|AAY82793.1| hypothetical protein At2g13640 [Arabidopsis thaliana]
Length = 379
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 5 VMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLT 64
+++L E AK+ A+ A + K + CIDAL L K +IT +++ L LT
Sbjct: 264 MVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGLT 323
Query: 65 EHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCT 99
+H +KI AS L+ WR EQ E+K S T
Sbjct: 324 KHKDRKICHVASALLHLWRQRIREQ---ERKKSVT 355
>gi|29423670|gb|AAO73429.1| hypothetical protein [Arabidopsis thaliana]
Length = 384
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 5 VMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLT 64
+++L E AK+ A+ A + K + CIDAL L K +IT +++ L LT
Sbjct: 264 MVKLFEAAKKAADVANAKGVLSGKPEVSRCIDALSLLMKINITPKPKEPRRMMDKLEGLT 323
Query: 65 EHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCT 99
+H +KI AS L+ WR EQ E+K S T
Sbjct: 324 KHKDRKICHVASALLHLWRQRIREQ---ERKKSVT 355
>gi|281340950|gb|EFB16534.1| hypothetical protein PANDA_017273 [Ailuropoda melanoleuca]
Length = 349
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F ++ YK R+ + NLK+P+N ++ +L G P MT E
Sbjct: 200 LAREIEEHIFTLHSKNLKKYKTCVRSKVANLKNPQNSHLQQNLLSGTTSPREFAEMTVME 259
Query: 288 MASDEM 293
MAS E+
Sbjct: 260 MASKEL 265
>gi|396475080|ref|XP_003839700.1| hypothetical protein LEMA_P111400.1 [Leptosphaeria maculans JN3]
gi|312216270|emb|CBX96221.1| hypothetical protein LEMA_P111400.1 [Leptosphaeria maculans JN3]
Length = 935
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACD-SVRVAIALESAMFEKWGRSDG---PYKIK 250
E +RE + +S+ S I D A + + + + A F +G G PY K
Sbjct: 329 EKLREILVPLISEASNARGYRIPDGQTARSLATQYTLQISHAAFAAYGEPSGVESPYLAK 388
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSY 297
R ++ N+K KN ++L G +K + V M A+EMAS++ R Y
Sbjct: 389 IRMIMFNVK--KNTVLVDRMLSGSLKAQEFVKMEAEEMASEDKQREY 433
>gi|452847451|gb|EME49383.1| hypothetical protein DOTSEDRAFT_68235 [Dothistroma septosporum
NZE10]
Length = 839
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 198 REKVCDALSKVSGEADEEIR---------DEVNACDSVRVAIALESAMFEKWGRSDGPYK 248
R+ V ALSK+ G AD E R + A+ +E ++ G PYK
Sbjct: 268 RQSVAQALSKIIG-ADIEKRAKSGSKLPTGQTGTSLGEYYAVRIEYSLHMNHGAGQEPYK 326
Query: 249 IKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLR 295
++R + NLK KN K++ G + P+ + M + EM S++ R
Sbjct: 327 QQFRTLHANLK--KNTGLIEKLMLGSLTPDELSTMDSSEMLSEDKQR 371
>gi|116830493|gb|ABK28204.1| unknown [Arabidopsis thaliana]
Length = 249
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 5 VMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLT 64
++L E AK+ A+ A A + T+ C+D L L + I+ + + +L+ L LT
Sbjct: 154 TLELFEIAKKSADFANAKGILASEVETSMCVDTLTLLLEFPISARDMETRKLMVRLEHLT 213
Query: 65 EHPTKKIQDFASDLIVSWRDMFLE-QIRDEKK 95
+H +KI + AS L+ WR+ E Q+R+ +K
Sbjct: 214 KHKNRKICNSASKLLQCWRESIREQQLRESRK 245
>gi|15225791|ref|NP_180868.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|2924782|gb|AAC04911.1| hypothetical protein [Arabidopsis thaliana]
gi|91805475|gb|ABE65466.1| unknown [Arabidopsis thaliana]
gi|330253690|gb|AEC08784.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 248
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 5 VMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLT 64
++L E AK+ A+ A A + T+ C+D L L + I+ + + +L+ L LT
Sbjct: 154 TLELFEIAKKSADFANAKGILASEVETSMCVDTLTLLLEFPISARDMETRKLMVRLEHLT 213
Query: 65 EHPTKKIQDFASDLIVSWRDMFLE-QIRDEKK 95
+H +KI + AS L+ WR+ E Q+R+ +K
Sbjct: 214 KHKNRKICNSASKLLQCWRESIREQQLRESRK 245
>gi|449299188|gb|EMC95202.1| hypothetical protein BAUCODRAFT_530419 [Baudoinia compniacensis
UAMH 10762]
Length = 311
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 214 EEIRDEVNACDSVRVAIALESAMFEKWGR-SDGPYKIKYRAVLGNLKDPKNPDFRRKVLF 272
EE DEV + A ++E+A F + YK+K R++ NLK N RR V
Sbjct: 168 EESPDEV-----LVAARSVEAAAFSVHNNETSSAYKMKMRSLFQNLKMKGNATLRRDVFN 222
Query: 273 GQVKPETVVGMTAKEMASDE 292
G+++P+ V MT+ E+ + E
Sbjct: 223 GKIEPKRFVTMTSDELKNAE 242
>gi|444509110|gb|ELV09184.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Tupaia chinensis]
Length = 351
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E ++ ++ YK R+ + NLK+PKN ++ +L G + P M E
Sbjct: 201 LAREIEEHVYTLHSKNLKKYKTCIRSKVANLKNPKNSHLQQNLLSGTMSPREFAKMNVME 260
Query: 288 MASDEM 293
MAS E+
Sbjct: 261 MASQEL 266
>gi|350296969|gb|EGZ77946.1| transcription elongation factor [Neurospora tetrasperma FGSC 2509]
Length = 298
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 226 VRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
V+ AI +E+A+F+ + Y+ K R + +LK N R+V+ G++ E +V ++
Sbjct: 163 VKRAIEVENALFKACKGENQEYRSKGRTLFTSLKRKDNAALGRRVMSGELPVERLVVLSD 222
Query: 286 KEMASDEMLRSYQHEDEERARLWKEHTRK 314
KE+AS+E + DEE L KE+ +K
Sbjct: 223 KELASEEQ----RARDEE---LEKENMKK 244
>gi|331242717|ref|XP_003334004.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312994|gb|EFP89585.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 382
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
S+G YKIK R+++ NL+D NP R V+ G++ + M ++MAS+E
Sbjct: 265 SNG-YKIKMRSLIFNLRDKNNPGLRESVVSGEISAGRLCVMGPQDMASEE 313
>gi|310789962|gb|EFQ25495.1| transcription elongation factor S-II [Glomerella graminicola
M1.001]
Length = 302
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D + A+A+E A + + Y+ K R++ NLK N V+ G++ PE V M
Sbjct: 165 DVLTKAVAVEYAAYIHFKGVTKEYREKLRSLFSNLKVKSNRQLGINVMEGKITPERFVVM 224
Query: 284 TAKEMASDEMLR---SYQHEDEERARL 307
T +E+ SDE + + Q E+ ++A++
Sbjct: 225 THEELKSDEQRKKEDALQQENMKKAQV 251
>gi|225431398|ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
vinifera]
Length = 305
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 35 IDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEK 94
+D L L DIT L T + R++ L +HP+ ++ L+ W+D+ E ++
Sbjct: 129 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNP 188
Query: 95 KGSCT-----IPGDTEPAKIEKV 112
G T GD+ P KI +
Sbjct: 189 AGEFTSSALMAEGDSPPQKIPRT 211
>gi|187608701|ref|NP_001120586.1| transcription elongation factor A (SII) N-terminal and central
domain containing [Xenopus (Silurana) tropicalis]
gi|171846965|gb|AAI61589.1| LOC100145741 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A A+E +++ + Y+ R+ + NLK+PKN + ++L + P+ M E
Sbjct: 199 LAKAIEENIYKIHAGNTKKYRNCIRSKISNLKNPKNSHLKMQILSRALSPKVFAEMGVME 258
Query: 288 MASDEM 293
MA DE+
Sbjct: 259 MACDEL 264
>gi|301784152|ref|XP_002927499.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Ailuropoda melanoleuca]
Length = 373
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F ++ YK R+ + NLK+P+N ++ +L G P MT E
Sbjct: 223 LAREIEEHIFTLHSKNLKKYKTCVRSKVANLKNPQNSHLQQNLLSGTTSPREFAEMTVME 282
Query: 288 MASDEM 293
MAS E+
Sbjct: 283 MASKEL 288
>gi|15226245|ref|NP_180346.1| transcription factor IIS-like protein [Arabidopsis thaliana]
gi|3860254|gb|AAC73022.1| hypothetical protein [Arabidopsis thaliana]
gi|330252949|gb|AEC08043.1| transcription factor IIS-like protein [Arabidopsis thaliana]
Length = 368
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 5 VMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLT 64
+++L E AK+ A+ A + KA + CIDAL L K +IT +++ L LT
Sbjct: 262 MVKLFEAAKKAADVANAKGVLSGKAEASRCIDALSVLMKINITPKPKEPRRMMDKLEGLT 321
Query: 65 EHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCT 99
+H + I AS L+ WR EQ E+K S T
Sbjct: 322 KHKDRMICHVASALLHLWRQRIREQ---ERKKSVT 353
>gi|297822507|ref|XP_002879136.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297826173|ref|XP_002880969.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297324975|gb|EFH55395.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297326808|gb|EFH57228.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 324
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%)
Query: 5 VMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLT 64
+++L E AK+ A+ A + KA + C+DAL L + +IT +++ L LT
Sbjct: 222 MVKLFEAAKKAADVANAKGVLSGKAEASRCVDALSLLMEINITPKPKEPRRMMDKLEGLT 281
Query: 65 EHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
+H +KI AS L+ WR EQ R E
Sbjct: 282 KHKDRKICHAASALLHLWRQRIREQERKE 310
>gi|348541331|ref|XP_003458140.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Oreochromis niloticus]
Length = 323
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YK R+ + NL++PK+ + +L G + PE M+A++MAS E+
Sbjct: 192 YKACVRSKVANLRNPKSGHLHQGLLSGSLSPEAFARMSAEDMASAEL 238
>gi|398015843|ref|XP_003861110.1| transcription elongation factor, putative [Leishmania donovani]
gi|322499335|emb|CBZ34408.1| transcription elongation factor, putative [Leishmania donovani]
Length = 333
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 248 KIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
K ++ +L N+KD KN + RRKV+ G++ E +V M E+A+ E+ + + + EER++
Sbjct: 216 KDTFQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELRKHIEEKIEERSK 274
>gi|344304668|gb|EGW34900.1| hypothetical protein SPAPADRAFT_131482 [Spathaspora passalidarum
NRRL Y-27907]
Length = 296
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 226 VRVAIALESAMFE-KWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMT 284
+++A +ES +F+ ++ + Y+ K R+ NL++ KNP+ R ++L + + MT
Sbjct: 160 LKIASEIESEVFKSEYSKVTDSYRNKLRSFTMNLRNKKNPELRERLLTQAILAANFIKMT 219
Query: 285 AKEMASDEM 293
EMA + +
Sbjct: 220 PSEMAPESL 228
>gi|339898310|ref|XP_003392533.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
gi|321399505|emb|CBZ08701.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
Length = 333
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 248 KIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
K ++ +L N+KD KN + RRKV+ G++ E +V M E+A+ E+ + + + EER++
Sbjct: 216 KDTFQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELRKHIEEKIEERSK 274
>gi|71051072|gb|AAH99524.1| Phf3 protein, partial [Mus musculus]
Length = 366
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 257 NLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
NLKDPKN +KVL G+V P+ ++ M+ +E+AS E+
Sbjct: 2 NLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKEL 38
>gi|403220912|dbj|BAM39045.1| transcription elongation factor [Theileria orientalis strain
Shintoku]
Length = 319
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 195 EVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW---GRSDGPYKIKY 251
EVVR+K L + ++ E+N +++ I E+A+++ + + Y ++
Sbjct: 148 EVVRDKALRYLFRC-FLVGQDFGPELNKLNALVYEI--ENALYDHYVVNKNAQKEYNLQL 204
Query: 252 RAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
+ + N KD KN F KV G + +V M++ +MASDE
Sbjct: 205 KCISFNFKDIKNTFFNYKVYSGAIPVSELVTMSSLQMASDE 245
>gi|258575459|ref|XP_002541911.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
gi|237902177|gb|EEP76578.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
Length = 303
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 229 AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+I +E+A + +G + Y+ K R++ NLK+ N R +VL ++ + V MT E
Sbjct: 171 SIEVEAAAYNAFGPETKDQYRTKIRSLYQNLKNKSNLSLRMRVLSNEITSDKFVRMTHDE 230
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ SDE EE ++ KE+ K M
Sbjct: 231 LKSDE-------RREEDLKIQKENMDKAM 252
>gi|186504949|ref|NP_180888.2| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|91805477|gb|ABE65467.1| hypothetical protein At2g33300 [Arabidopsis thaliana]
gi|330253717|gb|AEC08811.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 276
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 2 EKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLL 61
+K +++L E AK+ A+ A A + T+ C+D L L + I+ + + +L+ L
Sbjct: 179 DKDLLELFEIAKKSADFANAKGILASEVETSMCVDTLALLLEFPISARAMETRKLMVRLE 238
Query: 62 PLTEHPTKKIQDFASDLIVSWRDMFL-EQIRDEKK 95
LT+H +KI + S L+ WR +Q+R+ +K
Sbjct: 239 NLTKHKNRKICNSVSKLLQCWRQSIRDQQLRESRK 273
>gi|328767604|gb|EGF77653.1| hypothetical protein BATDEDRAFT_91451 [Batrachochytrium
dendrobatidis JAM81]
Length = 296
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 227 RVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAK 286
++A ++E +F +D YK + R + NLK N R +VL G++ + MTA+
Sbjct: 164 KIASSIEKHIFAACECTDAKYKSRIRTLTSNLK--LNASLRSQVLGGKISTDRFAMMTAE 221
Query: 287 EMASDE 292
EM S+E
Sbjct: 222 EMMSEE 227
>gi|325182938|emb|CCA17393.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325189886|emb|CCA24366.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 277
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 224 DSVRVAIALESAMFEKWGRS---DGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETV 280
+S ++A+ +E+ +FE + Y K R +L NL+D +N R +++ G++ +
Sbjct: 135 NSDQIAMEVENQLFELYKECFTLPKAYGQKARQLLFNLRDSRNDLLRDRLMSGELSAAAL 194
Query: 281 VGMTAKEMASDEMLR 295
V M+A EMA+ ++++
Sbjct: 195 VRMSANEMANPQLVK 209
>gi|296088637|emb|CBI37628.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 5/83 (6%)
Query: 35 IDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEK 94
+D L L DIT L T + R++ L +HP+ ++ L+ W+D+ E ++
Sbjct: 129 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEWVKSNP 188
Query: 95 KGSCT-----IPGDTEPAKIEKV 112
G T GD+ P KI +
Sbjct: 189 AGEFTSSALMAEGDSPPQKIPRT 211
>gi|85119699|ref|XP_965694.1| hypothetical protein NCU02563 [Neurospora crassa OR74A]
gi|28927506|gb|EAA36458.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567143|emb|CAE76438.1| related to transcription elongation factor TFIIS [Neurospora
crassa]
gi|336464865|gb|EGO53105.1| hypothetical protein NEUTE1DRAFT_73389 [Neurospora tetrasperma FGSC
2508]
Length = 298
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 226 VRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
V+ A+ +E+A+F+ + Y+ K R + +LK N R+V+ G++ E +V ++
Sbjct: 163 VKRAVEVENALFKACKGENQEYRSKGRTLFTSLKRKDNAALGRRVMSGELPVERLVVLSD 222
Query: 286 KEMASDEMLRSYQHEDEERARLWKEHTRK 314
KE+AS+E + DEE L KE+ +K
Sbjct: 223 KELASEEQ----RARDEE---LEKENMKK 244
>gi|255939243|ref|XP_002560391.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585013|emb|CAP83061.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 306
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 229 AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
AIA+E + ++ G + Y+ K R++ NLK+ NP R +V+ G++ + V M+ E
Sbjct: 174 AIAVEVSAYKYLGPETKEEYRTKIRSLFQNLKNKSNPKLRVRVIEGEITADQFVRMSHDE 233
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ S E + E A++ KE+ K M
Sbjct: 234 LRSVE-------QREADAKIQKENMDKAM 255
>gi|341879127|gb|EGT35062.1| hypothetical protein CAEBREN_12817 [Caenorhabditis brenneri]
Length = 309
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 224 DSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGM 283
D +A+ +E + ++ Y R+ + NL+D KN R VL G V+ E M
Sbjct: 172 DPEELAVQIEEKLHSVHRGTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 231
Query: 284 TAKEMASDEM 293
T++EMAS E+
Sbjct: 232 TSEEMASPEI 241
>gi|2459413|gb|AAB80648.1| hypothetical protein [Arabidopsis thaliana]
Length = 265
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 2 EKKVMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLL 61
+K +++L E AK+ A+ A A + T+ C+D L L + I+ + + +L+ L
Sbjct: 168 DKDLLELFEIAKKSADFANAKGILASEVETSMCVDTLALLLEFPISARAMETRKLMVRLE 227
Query: 62 PLTEHPTKKIQDFASDLIVSWRDMFL-EQIRDEKK 95
LT+H +KI + S L+ WR +Q+R+ +K
Sbjct: 228 NLTKHKNRKICNSVSKLLQCWRQSIRDQQLRESRK 262
>gi|410080934|ref|XP_003958047.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
gi|372464634|emb|CCF58912.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
Length = 323
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGR--SDGPYKIK 250
R+ V + DAL+K S I ++++I +E+ M + + ++ YK K
Sbjct: 162 LRDSVIRALYDALAKESQHPPNSI---------LKLSIEIEAEMNKSYDSIANEKQYKEK 212
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR + NL N D + K+ G + P +V KE+A + +
Sbjct: 213 YRIIYSNLISKNNSDLKFKITNGDITPVHLVNCDPKELAPEPL 255
>gi|406865033|gb|EKD18076.1| transcription elongation factor S-II [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 301
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 229 AIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
AI +E A F+ + + D P Y+ K R++ NLK N + V+ G++ PE V M+ +E
Sbjct: 169 AIEVEKAAFDAF-KGDTPEYRSKLRSLFQNLKAISNRELAPAVMSGEIPPEKFVVMSHEE 227
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRK 314
+ S E + EDE +L K++ +K
Sbjct: 228 LKSSE----RRKEDE---KLQKDNMKK 247
>gi|124511836|ref|XP_001349051.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
gi|23498819|emb|CAD50896.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
Length = 403
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
S Y ++ +++ NL D KNP+F KV + + + M +++MASDE
Sbjct: 280 SQKEYNMQLKSIKFNLSDKKNPNFNEKVYSEFISSKALATMNSQDMASDE 329
>gi|410079068|ref|XP_003957115.1| hypothetical protein KAFR_0D03320 [Kazachstania africana CBS 2517]
gi|372463700|emb|CCF57980.1| hypothetical protein KAFR_0D03320 [Kazachstania africana CBS 2517]
Length = 560
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 228 VAIALESAMFEKW-----GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
+A LE+ +++ W + Y K R++ NLKDPKN + + V+ + E +V
Sbjct: 232 MASNLENELYKAWFNPEESKLSNYYAEKVRSIFSNLKDPKNLNLQAHVVNKDIPFEKLVR 291
Query: 283 MTAKEMASDEM 293
M+A E+A+ ++
Sbjct: 292 MSATELANPDL 302
>gi|354493939|ref|XP_003509097.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Cricetulus griseus]
Length = 420
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F + YKI R+ + NL +PKN ++K+L G + MT +
Sbjct: 191 LAREIEEHIFTLHSSNIKKYKICIRSKVANLNNPKNSHLQQKLLSGTMSAREFAEMTVLD 250
Query: 288 MASDEM 293
MA++E+
Sbjct: 251 MANEEL 256
>gi|299116198|emb|CBN74547.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 1752
Score = 39.3 bits (90), Expect = 2.6, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYR 252
FR V ++ + + E + D C + + E F + R G YK K +
Sbjct: 1044 FRHKVMDRFRELFADGMAELGVDAADAAVLCGMLAWDLEHELNAFSRTNR--GVYKEKAQ 1101
Query: 253 AVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARLWKEHT 312
++ N+K KNP+ + +L G +T+ GM+ E+AS H EER R+ E
Sbjct: 1102 SLRFNIKFAKNPELFKDLLSGGTSMKTLCGMSTDELAS-------SHLKEERKRIRDESY 1154
Query: 313 RKYMQR 318
++++
Sbjct: 1155 AGHLRQ 1160
>gi|157869975|ref|XP_001683538.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
gi|68126604|emb|CAJ04034.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
Length = 333
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%)
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
++ +L N+KD KN + RRKV+ G++ E +V M E+A+ E+ + + + EER++
Sbjct: 219 FQTLLFNIKDSKNGELRRKVVEGELLVERLVTMDDLELANPELRKHIEEKIEERSK 274
>gi|451851025|gb|EMD64326.1| hypothetical protein COCSADRAFT_171386 [Cochliobolus sativus
ND90Pr]
Length = 881
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 235 AMFEKWGRSDG---PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
A F +G G PY K R ++ N+K KN ++L G +K E +V M A+EMAS+
Sbjct: 346 AAFNLYGEPTGGSSPYFGKMRTIMFNVK--KNTVLVDRLLSGSLKAEDLVSMEAEEMASE 403
Query: 292 EMLRSY 297
+ R Y
Sbjct: 404 DKQREY 409
>gi|356528334|ref|XP_003532759.1| PREDICTED: uncharacterized protein LOC100787670 isoform 2 [Glycine
max]
Length = 596
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 220 VNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPET 279
VN D+V +ALE A + Y K R ++ NLK+ N R++L G+++P
Sbjct: 387 VNEYDAVPAVVALEKASHDTLSSDYQKYNQKLRQLVFNLKN--NAILARRLLNGELEPSK 444
Query: 280 VVGMTAKEM 288
++ MT E+
Sbjct: 445 ILNMTPNEL 453
>gi|403356500|gb|EJY77845.1| transcription elongation factor s-ii, putative [Oxytricha
trifallax]
Length = 618
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 205 LSKVSGEADEEIRDE-VNACDSVRVAIALESAMFEKWGRS-DGPYKIKYRAVLGNLKDPK 262
+K+ G ++ + DE C + +A+ +ES M+ + S Y KYR + L++ +
Sbjct: 320 FNKIQGASESDKEDEKYLVC--MNLALNIESHMWVLYDESISKEYSSKYRQLHTALRNDE 377
Query: 263 NPDFRRKVLFGQVKPETVVGMTAKEMAS 290
N + R K+L G+++P V ++ ++AS
Sbjct: 378 NYELRLKILMGEIEPSQVPDLSVNDLAS 405
>gi|357618039|gb|EHJ71135.1| hypothetical protein KGM_08149 [Danaus plexippus]
Length = 1879
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 16/116 (13%)
Query: 185 SKIRCNDCFREVVREKVCDALSKVSGEAD------EEIRDEVNACDSVRVAIALESAMFE 238
S++ D RE VR+ + + ++ E D EEI+ + A E + E
Sbjct: 989 SRMSSEDPIRENVRKALQEQIASRMAEYDGPKFTEEEIQ---------QFAYDTELELHE 1039
Query: 239 KWGRSDG-PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+ R G YK KYR+++ N+KD KN K+ + P+ +V + +E+AS E+
Sbjct: 1040 LFNRDVGMKYKAKYRSLMFNIKDRKNLSLWEKICEKVITPKQLVRFSPEELASQEL 1095
>gi|365986008|ref|XP_003669836.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
gi|343768605|emb|CCD24593.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
Length = 308
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFE--KWGRSDGPYKIK 250
R+ V + DAL+K S I V + +ES MF+ ++ YK K
Sbjct: 147 LRDSVIRALYDALAKGSEHPPNSILHTVKS---------IESEMFKLNNCTENEKAYKEK 197
Query: 251 YRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
YR + N+ N D + K+ + PE +V KE+A + +
Sbjct: 198 YRIIYSNIISKNNADLKNKIANNDISPEYLVTCDPKELAPEHL 240
>gi|425781061|gb|EKV19043.1| Transcription elongation factor S-II [Penicillium digitatum PHI26]
gi|425783194|gb|EKV21053.1| Transcription elongation factor S-II [Penicillium digitatum Pd1]
Length = 306
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 229 AIALESAMFEKWG-RSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
AIA+E + ++ G + Y+ K R++ NLK+ NP R +V+ G++ + V M+ E
Sbjct: 174 AIAVEISAYKYLGPETKEEYRTKIRSLFQNLKNKSNPKLRVRVVEGEITSDQFVRMSHDE 233
Query: 288 MASDEMLRSYQHEDEERARLWKEHTRKYM 316
+ S E + E A++ KE+ K M
Sbjct: 234 LRSVE-------QREADAKIQKENMDKAM 255
>gi|440635961|gb|ELR05880.1| transcription elongation factor S-II [Geomyces destructans
20631-21]
Length = 301
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 229 AIALESAMFEKWGRSDGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
A+ +E A F K+ + D P Y+ K R++ NLK+ +N + +VL G++ + V MT E
Sbjct: 169 AMEVEKAAFTKY-KGDTPEYRAKMRSLFQNLKNKQNKELGPRVLSGEIPADKFVIMTHDE 227
Query: 288 MASDEMLRSYQHEDEE 303
+ S E + ED+E
Sbjct: 228 LKSAE----RKKEDDE 239
>gi|4217|emb|CAA24928.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 128
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMA 289
++ YK +YR + N+ NPD + K+ G + PE + AK++A
Sbjct: 10 NEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 56
>gi|336262956|ref|XP_003346260.1| DST1 protein [Sordaria macrospora k-hell]
gi|380093589|emb|CCC08553.1| putative DST1 protein [Sordaria macrospora k-hell]
Length = 298
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 7/89 (7%)
Query: 226 VRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTA 285
V+ A+ +E+A+F+ + Y+ K R + +LK N R+V+ G++ + +V ++
Sbjct: 163 VKRAVEVENALFKACKGENQEYRSKARTLFTSLKRKDNAALGRRVMSGELPVDRLVVLSD 222
Query: 286 KEMASDEMLRSYQHEDEERARLWKEHTRK 314
KE+AS+E + DEE L KE+ +K
Sbjct: 223 KELASEEQ----RARDEE---LEKENMKK 244
>gi|157134596|ref|XP_001663321.1| DNA-directed RNA polymerase I largest subunit [Aedes aegypti]
gi|108870419|gb|EAT34644.1| AAEL013134-PA [Aedes aegypti]
Length = 1686
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 17/156 (10%)
Query: 125 GVGIVKVQKVDQNSTSSSSNVVRSEIVETEETNSADNVNVGNSITEEGEASGIILH--KL 182
G+ I K Q ++ ++ R IV+TE S N +E I+ H K+
Sbjct: 1001 GMDISKAQFIETPKHLKFLDLNRDAIVQTETVKSLAN--------DEDLNDQILRHVKKM 1052
Query: 183 SSSKIRCNDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIA---LESAMFEK 239
S + + DC ++V +K S E EEIR V+ D ++ L + +K
Sbjct: 1053 KSWRKKHGDCLQKVR----VSPFTKYSSEHSEEIRAAVSDPDRLKSKSGRTRLTEKIVKK 1108
Query: 240 WGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQV 275
W ++D K KY DP FR FG +
Sbjct: 1109 WHKADPSLKAKYAKKYSRCPDPTFSLFRPDSCFGSL 1144
>gi|18416107|ref|NP_568218.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26c
gi|332004072|gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 353
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
++ L L DIT L T + R++ + +HP+ ++ A L+ W++ E ++
Sbjct: 144 LVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWVK-- 201
Query: 94 KKGSCTIPGDTEPAKIEKVDKRTSEEC------QEISGVGIVKVQKVDQNSTSSSSNVVR 147
PGD EP + + ++ Q++ G V + +S+S +SN+
Sbjct: 202 ----FNQPGDLEPPSLIADEDSPVQKALHNGSRQQVPDFGYSPVPQNGYSSSSKNSNITE 257
Query: 148 SE 149
E
Sbjct: 258 PE 259
>gi|401422688|ref|XP_003875831.1| transcription elongation factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492071|emb|CBZ27345.1| transcription elongation factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 235
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 252 RAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE--MLRSYQHEDEERARL-- 307
RAV L DP N + R VL G+++PE +V + DE +L + E E+ARL
Sbjct: 120 RAVTRALADPLNGELRESVLSGRLRPEELVAL-------DEVSLLNQAEREVLEKARLER 172
Query: 308 WKEHTRKYMQRM 319
+H+ +Y++R+
Sbjct: 173 LNQHSVEYLERL 184
>gi|367006041|ref|XP_003687752.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
gi|357526057|emb|CCE65318.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
Length = 303
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI 249
ND R+ V + + DAL+K S + I + V I L+ + Y+
Sbjct: 139 NDDLRDRVIKALYDALAKESEHPPQAILNTVKD-------IELQMHNLHNSETDEKAYRE 191
Query: 250 KYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
+YR + N+ NPD + K+ G+V E + ++K++A + +
Sbjct: 192 RYRIIYSNVISKNNPDLKHKITNGEVTAEFLSKCSSKDLAPEYL 235
>gi|16648730|gb|AAL25557.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
gi|20147241|gb|AAM10334.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
Length = 302
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
++ L L DIT L T + R++ + +HP+ ++ A L+ W++ E ++
Sbjct: 93 LVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWVK-- 150
Query: 94 KKGSCTIPGDTEP--------AKIEKVDKRTSEECQEISGVGIVKVQKVDQNSTSSSSNV 145
PGD EP + ++K S Q++ G V + +S+S +SN+
Sbjct: 151 ----FNQPGDLEPPSLIADEDSPVQKALHNGSR--QQVPDFGYSPVPQNGYSSSSKNSNI 204
Query: 146 VRSE 149
E
Sbjct: 205 TEPE 208
>gi|50294766|ref|XP_449794.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637229|sp|Q6FJ00.1|BYE1_CANGA RecName: Full=Transcription factor BYE1
gi|49529108|emb|CAG62772.1| unnamed protein product [Candida glabrata]
Length = 607
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 208 VSGEADEEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKI-------KYRAVLGNLKD 260
V G ++ I DE A +ES +F RS YK K R + NLKD
Sbjct: 268 VKGHDEQSISDEF--------AEEMESKLFSHC-RSISNYKTLISVYTEKVRVLFSNLKD 318
Query: 261 PKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
PKN + V+ Q+ E +V M+A ++A+ ++
Sbjct: 319 PKNLSLKEAVINRQLDLEQLVSMSATDLANPDL 351
>gi|344242373|gb|EGV98476.1| hypothetical protein I79_017137 [Cricetulus griseus]
Length = 676
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 228 VAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKE 287
+A +E +F + YKI R+ + NL +PKN ++K+L G + MT +
Sbjct: 527 LAREIEEHIFTLHSSNIKKYKICIRSKVANLNNPKNSHLQQKLLSGTMSAREFAEMTVLD 586
Query: 288 MASDEM 293
MA++E+
Sbjct: 587 MANEEL 592
>gi|325183258|emb|CCA17716.1| transcription elongation factor putative [Albugo laibachii Nc14]
gi|325183904|emb|CCA18362.1| transcription elongation factor putative [Albugo laibachii Nc14]
Length = 309
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 28/129 (21%)
Query: 191 DCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIALESAMFEKW-----GRSDG 245
D R VR K+ + L D NA D VA A+E AM + G +
Sbjct: 134 DKMRATVRTKMKENLELADA-------DTSNAPD---VATAIEIAMARMFSVGFPGENKK 183
Query: 246 PYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDE--- 302
Y K+R + NLK KN R +L V E ++ M+ +E+A+DE +HE E
Sbjct: 184 DYTAKFRQLSFNLK--KNARLREDLLLDVVSAEQLINMSPEELATDE----KRHEIEKLR 237
Query: 303 ----ERARL 307
+RARL
Sbjct: 238 DDAFQRARL 246
>gi|154338127|ref|XP_001565288.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062337|emb|CAM42195.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 329
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 248 KIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERAR 306
K ++ +L ++KD KN + RRKV+ G++ E +V M +E+A+ E+ + + + EER++
Sbjct: 212 KDTFQTLLFSIKDSKNGELRRKVVEGELLVERLVTMDDRELANPELRKQIEEKMEERSK 270
>gi|406607842|emb|CCH40780.1| Transcription elongation factor [Wickerhamomyces ciferrii]
Length = 240
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 226 VRVAIALESAMF--EKW-GRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVG 282
+++A +E+ +F EK+ S+ Y + R++ NL+ NP+ R K+ G + P+ +
Sbjct: 102 LKLAKEIEAEVFHAEKFDTSSNTKYAQRLRSLTSNLRQKNNPELRNKINNGDLLPKVFIN 161
Query: 283 MTAKEMASD 291
M+ +EMA +
Sbjct: 162 MSPREMAPE 170
>gi|219110209|ref|XP_002176856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411391|gb|EEC51319.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1960
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 190 NDCFREVVREKVCDALSKVSGEADEEIRDEVNACDSVRVAIAL-----ESAMFEKWGRSD 244
N FR+ R+ AL K E + +V++ D R AL E A+F+++ R
Sbjct: 1623 NGSFRQAGRQHFATALMK----GLEHLGLQVSS-DESRTLCALKAEEIERALFDQFQRFV 1677
Query: 245 GP------YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQ 298
G YK + RA+ + D N VL G V P +V M+ E+AS ++ + +
Sbjct: 1678 GEQAISPEYKRQARAIKAGIADKGNAKLCGGVLQGDVDPAILVRMSDDELASPQVRQERE 1737
Query: 299 HEDEE 303
H ++E
Sbjct: 1738 HAEKE 1742
>gi|238604164|ref|XP_002396131.1| hypothetical protein MPER_03698 [Moniliophthora perniciosa FA553]
gi|215468105|gb|EEB97061.1| hypothetical protein MPER_03698 [Moniliophthora perniciosa FA553]
Length = 168
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 188 RCNDCFREV-VREKVCDALSKVSGEAD----EEIRDEVNA--CDSVRVAIALESAMFEKW 240
+ D FR++ +R + +G D E DE N + + A LE+ ++E +
Sbjct: 20 KLEDLFRDIFLRYPYVRSTDGETGGGDNGSKELSEDEKNMVLAQARQFAGDLEACVYELY 79
Query: 241 GRSD-------GP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
SD GP YK ++R + NL P +++ Q+ P+ + GM++ ++A++E
Sbjct: 80 AESDKSGHSSAGPKYKDRFRTLQFNLSKPDRVMIHKRIASAQITPKELSGMSSTDLANEE 139
Query: 293 MLRSYQHEDEE 303
+ +S + ++E
Sbjct: 140 LKQSIKIAEQE 150
>gi|15240482|ref|NP_198083.1| Transcription factor IIS family protein [Arabidopsis thaliana]
gi|332006288|gb|AED93671.1| Transcription factor IIS family protein [Arabidopsis thaliana]
Length = 370
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 5 VMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLT 64
+++L E AK+ A+ A + K + CI+AL L K +IT ++ L LT
Sbjct: 264 MVKLFEAAKKAADVANAKGVLSGKPEASRCINALSLLMKINITPKPKEPRSMMDKLEGLT 323
Query: 65 EHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGSCT 99
+H +KI AS L+ WR EQ E+K S T
Sbjct: 324 KHKDRKICHVASALLHLWRQRIREQ---ERKKSVT 355
>gi|405121407|gb|AFR96176.1| positive transcription elongation factor [Cryptococcus neoformans
var. grubii H99]
Length = 333
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 252 RAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
R++ NLKD NP R +++ G V E V M+ EMAS+ +
Sbjct: 224 RSLFLNLKDKGNPALRNEIVLGYVSTEKVASMSKDEMASESV 265
>gi|367020002|ref|XP_003659286.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
gi|347006553|gb|AEO54041.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
Length = 309
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 244 DGP-YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASD 291
D P Y+ K R ++ +LK N + R+VL G++ P+ V MT +E+ASD
Sbjct: 191 DTPEYRNKIRGLMTSLKRKDNAELGRRVLDGEIPPDKFVVMTDEELASD 239
>gi|255647376|gb|ACU24154.1| unknown [Glycine max]
Length = 336
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 35 IDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEK 94
D+L +L ++T LL +T++ + + PL +H ++ I A LI W+ M E ++D
Sbjct: 165 FDSLRRLQLMELTVDLLKATEIGKAVNPLRKHGSRDICQLARTLIDGWKQMVDEWVKDTT 224
Query: 95 --KGSCTIPGDTEPAKIE 110
GS P P+ ++
Sbjct: 225 AIAGSEGTPDSVNPSVVD 242
>gi|168060055|ref|XP_001782014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666505|gb|EDQ53157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 35 IDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIR 91
+ AL L I+ L T++ + + L +HP+K+++ A DL+ SW+D+ E ++
Sbjct: 515 LTALRTLEDMHISVEALKQTEIGKEVNALRKHPSKRVRSLAKDLVRSWKDLVDEWVK 571
>gi|429855994|gb|ELA30929.1| transcription elongation factor s-ii [Colletotrichum
gloeosporioides Nara gc5]
Length = 300
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 237 FEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
F + PYK K R++ NLK N + V+ G++ P+ V MT +E+ S E
Sbjct: 176 FSHFKGVGAPYKEKVRSLFSNLKVKTNKELGVNVMEGKITPDRFVAMTQEELKSAE 231
>gi|345783037|ref|XP_540817.3| PREDICTED: cell cycle checkpoint control protein RAD9A [Canis lupus
familiaris]
Length = 390
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 38 LDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDEKKGS 97
L L++SD+ P + S +L R PL H T + DFASD I S+ M + + +GS
Sbjct: 262 LATLSESDLHSPAMCSPELHRLAPPLQAHSTPHLDDFASDDIDSY--MIAMETTADSEGS 319
Query: 98 CTIP 101
+P
Sbjct: 320 RAVP 323
>gi|242764560|ref|XP_002340799.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218723995|gb|EED23412.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 875
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 20/125 (16%)
Query: 193 FREVVREKVCDALSKVSGEADEEIRDEVNACDSVR-VAIALESAMFEKW----GRSDGPY 247
F+E V A V E EE D R + +++E AM+ G + Y
Sbjct: 290 FKEQVTSAQKQAAYSVPPEKTEE--------DVARPLGLSVEHAMYVNLCGGSGEPNDAY 341
Query: 248 KIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEMLRSYQHEDEERARL 307
K + R+++ N+K N R ++L G + P T+ M++++MAS+E Q +D E R
Sbjct: 342 KNQLRSIMFNVK--ANSSLRDRLLSGSLAPSTLATMSSQDMASEEQ----QQKDAEIKRA 395
Query: 308 W-KEH 311
K+H
Sbjct: 396 AEKQH 400
>gi|328861258|gb|EGG10362.1| hypothetical protein MELLADRAFT_33850 [Melampsora larici-populina
98AG31]
Length = 264
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 243 SDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDE 292
S+G YK K R+++ NLKD NP R V+ G++ + M +MAS+E
Sbjct: 144 SNG-YKNKMRSLIFNLKDKNNPGLREAVVSGEISSMKLCSMGPADMASEE 192
>gi|402086070|gb|EJT80968.1| transcription elongation factor S-II [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 295
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
AI +ESA F+++ Y+ + R++ NLK N + ++V G + V MT+ E+
Sbjct: 165 AIEVESAAFKEYNGETADYRTQMRSLFSNLK--ANRELAKRVFAGDIATAKFVKMTSDEL 222
Query: 289 ASDE 292
SD
Sbjct: 223 KSDH 226
>gi|320582848|gb|EFW97065.1| General transcription elongation factor TFIIS [Ogataea
parapolymorpha DL-1]
Length = 294
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 247 YKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEMASDEM 293
Y+ K R+++ NL++ NP+ R ++L ++K V MT +E+A + +
Sbjct: 180 YRNKMRSLIMNLRNKNNPELRARLLSREIKSSKFVTMTNQELAPEAL 226
>gi|297826755|ref|XP_002881260.1| hypothetical protein ARALYDRAFT_902374 [Arabidopsis lyrata subsp.
lyrata]
gi|297327099|gb|EFH57519.1| hypothetical protein ARALYDRAFT_902374 [Arabidopsis lyrata subsp.
lyrata]
Length = 250
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 5 VMQLCEEAKRGAEAAVMAEGEAEKAWTAWCIDALDQLNKSDITCPLLVSTQLVRYLLPLT 64
++L E AK+ A+ A A + T+ C+D L L + I+ + + +++ L LT
Sbjct: 156 TLELFEIAKKSADVANTKGLLAAEVETSICVDTLSLLMEFPISATAIETRRIMVRLENLT 215
Query: 65 EHPTKKIQDFASDLIVSWRDMFLEQ-IRDEKK 95
+H +KI + A+ L+ WR +Q +R+ +K
Sbjct: 216 KHKNRKICNSAAALLQCWRHSIRDQELRESRK 247
>gi|297811087|ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319264|gb|EFH49686.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 364
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 20/130 (15%)
Query: 34 CIDALDQLNKSDITCPLLVSTQLVRYLLPLTEHPTKKIQDFASDLIVSWRDMFLEQIRDE 93
++ L L DIT L T + R++ + +HP+ ++ A L+ W++ E ++
Sbjct: 144 LVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWVK-- 201
Query: 94 KKGSCTIPGDTEPAKI--EKVDKRTSEEC------------QEISGVGIVKVQKVDQNST 139
PGD EP + + + ++E Q++ G V + +S+
Sbjct: 202 ----FNQPGDLEPPSLIEQSISSNVADEDSPVQKALHNGNRQQVPDFGYSPVPQNGYSSS 257
Query: 140 SSSSNVVRSE 149
S +SN+ E
Sbjct: 258 SKNSNITEPE 267
>gi|396081166|gb|AFN82784.1| transcription elongation factor S-II [Encephalitozoon romaleae
SJ-2008]
Length = 252
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 214 EEIRDEVNACDSVRVAIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFG 273
E + ++ C + A+ + E + R+ R+ NLKD NP R V G
Sbjct: 107 EAFKTSISDCSNRYAALLAKQITNEIFERNSADIAKLVRSKCLNLKDKNNPVLCRMVYDG 166
Query: 274 QVKPETVVGMTAKEMASDEM 293
++ P V MT++EM S+ +
Sbjct: 167 EISPSRYVDMTSEEMKSESL 186
>gi|453088536|gb|EMF16576.1| hypothetical protein SEPMUDRAFT_145793 [Mycosphaerella populorum
SO2202]
Length = 855
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 229 AIALESAMFEKWGRSDGPYKIKYRAVLGNLKDPKNPDFRRKVLFGQVKPETVVGMTAKEM 288
A +E A+ +G + Y I++RA+L N K KN ++L G + + + M++ +M
Sbjct: 332 AARIEYALHMNYGGNQQGYSIQFRALLANFK--KNHVLVERLLNGSLTSDEISTMSSSDM 389
Query: 289 ASDEMLR 295
AS+++ R
Sbjct: 390 ASEDLQR 396
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.128 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,634,481,098
Number of Sequences: 23463169
Number of extensions: 178489569
Number of successful extensions: 421639
Number of sequences better than 100.0: 989
Number of HSP's better than 100.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 158
Number of HSP's that attempted gapping in prelim test: 420451
Number of HSP's gapped (non-prelim): 1229
length of query: 319
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 177
effective length of database: 9,027,425,369
effective search space: 1597854290313
effective search space used: 1597854290313
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)