BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020951
(319 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 330 bits (847), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 158/293 (53%), Positives = 195/293 (66%)
Query: 27 LSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANF 86
LS+N+Y + CP ALS +++ + +A+ E R+GASLLRLHFHDCFV GCD SVLLDDT+NF
Sbjct: 2 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 87 IGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRL 146
GEKTA PN NS RGF V+D IK+ +E CP VVSCADILA+AARDSVV GG SW V L
Sbjct: 62 TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLL 121
Query: 147 GXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRG 206
G +P P NLS LIS+FS +G + K +V L+G HT+G+A+CT+FR
Sbjct: 122 GRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRT 181
Query: 207 HIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXXHSDQE 266
IYN+SNID ++A+SLQ CP G D L+ D TP FD HSDQ+
Sbjct: 182 RIYNESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHSDQQ 241
Query: 267 LFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRINCRKIN 319
LFNG S D V Y+ + + F DF MIKMGN+ PLTG++GQIR NCRK N
Sbjct: 242 LFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 294
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 289 bits (740), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/303 (47%), Positives = 194/303 (64%), Gaps = 9/303 (2%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y TCP A +IVR+ I A++++TR+GASL+RLHFHDCFVNGCD S+LLDDT +
Sbjct: 2 QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGS 61
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
EK A PN NSARGFNVVD IK LE ACP VVSC+D+LA+A+ SV + GGPSW V
Sbjct: 62 IQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVL 121
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFR 205
LG IP P +LS + FSA GL+ ++VAL+G HT G+ARC F
Sbjct: 122 LGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFN 181
Query: 206 GHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXX 258
++N D ++++ +LQQ CP+ G+ + + NLD TP FD
Sbjct: 182 NRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSND 241
Query: 259 XXXHSDQELFN--GNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRINCR 316
SDQELF+ G+S +V +A++ ++FF+ FA+ MI MGNI PLTGS G+IR++C+
Sbjct: 242 GLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCK 301
Query: 317 KIN 319
K+N
Sbjct: 302 KVN 304
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 268 bits (684), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 138/302 (45%), Positives = 190/302 (62%), Gaps = 9/302 (2%)
Query: 27 LSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANF 86
L+ +Y TCP A ++VR + A ++++R+GASL+RLHFHDCFV GCD S+LLD++ +
Sbjct: 4 LNATFYAGTCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSGSI 63
Query: 87 IGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRL 146
I EK A PN NSARGFNVVD IK LE ACP VVSC D+LA+A++ SV + GGPSW V L
Sbjct: 64 ISEKNAGPNANSARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWTVDL 123
Query: 147 GXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRG 206
G IP PT LS + S FSA GL+ ++VAL+G HT G+A C F
Sbjct: 124 GRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVALSGAHTFGRATCGVFSN 183
Query: 207 HIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXX 259
++N D ++T+ +LQ+ CP++G + NLD TP FD
Sbjct: 184 RLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRGSGSTNLDLSTPDAFDNNYFTNLQSNNG 243
Query: 260 XXHSDQELFN--GNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRINCRK 317
SDQELF+ G++ +V +A++ ++FF+ FA+ MI MGNI PLTGS+G+IR++C+K
Sbjct: 244 LLQSDQELFSTTGSATIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSSGEIRLDCKK 303
Query: 318 IN 319
N
Sbjct: 304 TN 305
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 262 bits (669), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/305 (45%), Positives = 186/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL+GGHT GK +C S
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRSI 181
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 241
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 315 CRKIN 319
CR +N
Sbjct: 302 CRVVN 306
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 260 bits (665), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 186/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL+GGHT GK +C
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L ++D +TPT FD
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDMDLRTPTIFDNKYYVNLEEQ 241
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 315 CRKIN 319
CR +N
Sbjct: 302 CRVVN 306
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 260 bits (664), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 185/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL+GGHT GK +C
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 315 CRKIN 319
CR +N
Sbjct: 301 CRVVN 305
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 185/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL+GGHT GK +C
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 241
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 315 CRKIN 319
CR +N
Sbjct: 302 CRVVN 306
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 185/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL+GGHT GK +C
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 315 CRKIN 319
CR +N
Sbjct: 301 CRVVN 305
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 185/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL+GGHT GK +C
Sbjct: 122 LGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 241
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 315 CRKIN 319
CR +N
Sbjct: 302 CRVVN 306
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 185/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL+GGHT GK +C
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 315 CRKIN 319
CR +N
Sbjct: 301 CRVVN 305
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 259 bits (662), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 185/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL+GGHT GK +C
Sbjct: 122 LGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 241
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 315 CRKIN 319
CR +N
Sbjct: 302 CRVVN 306
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/305 (44%), Positives = 184/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL GGHT GK +C
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQCRFI 180
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 315 CRKIN 319
CR +N
Sbjct: 301 CRVVN 305
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 258 bits (659), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 136/305 (44%), Positives = 185/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL+GGH+ GK +C
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQCRFI 180
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 315 CRKIN 319
CR +N
Sbjct: 301 CRVVN 305
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 257 bits (656), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 136/305 (44%), Positives = 184/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+LRLHF DCFVNGCD S+LLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNTTS 61
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL+GGHT GK +C
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 241
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 315 CRKIN 319
CR +N
Sbjct: 302 CRVVN 306
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 256 bits (654), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/305 (45%), Positives = 183/305 (60%), Gaps = 17/305 (5%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QLS + Y +CP + IVR + A+K E R+ ASL+RLHFHDCFVNGCD S+LLD +
Sbjct: 1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS 60
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
EK A+PN NSARGF V+D IKA +E ACP VVSCADIL +AARDSVV+ GGP W+V
Sbjct: 61 ---EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVA 117
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFR 205
LG +P P L A+I+ F A L++ ++VAL+G HT G+A+C F
Sbjct: 118 LG-RKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFS 176
Query: 206 GHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXX 258
++N D+ ++TS +LQ CP GN N+ A LDR T FD
Sbjct: 177 NRLFNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGK 236
Query: 259 XXXHSDQELFNG----NSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQ LF+ N+ LV+ Y+ S S+FF+DF MI+MGNI G++G++R N
Sbjct: 237 GLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTN 294
Query: 315 CRKIN 319
CR IN
Sbjct: 295 CRVIN 299
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 254 bits (648), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/305 (44%), Positives = 183/305 (60%), Gaps = 11/305 (3%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y ++CP +IVR I+ ++++ R+ AS+L LHF DCFVNGCD S+LLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNTTS 60
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
F EK A N NSARGF V+D++KA +E ACPR VSCAD+L IAA+ SV + GGPSW+V
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSF 204
LG +P P L L SF GL+ ++VAL+GGHT GK +C
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 205 RGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN SN ++T++ ++L+ CP GN + L + D +TPT FD
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 258 XXXXHSDQELFNG-NSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRIN 314
SDQELF+ N+ D LV+ +A S FF F M +MGNI PLTG+ GQIR+N
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 315 CRKIN 319
CR +N
Sbjct: 301 CRVVN 305
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 132/303 (43%), Positives = 178/303 (58%), Gaps = 9/303 (2%)
Query: 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN 85
QL+ +Y+ TCP IV I A + R+GASL+RLHFHDCFV GCDGSVLL++T
Sbjct: 1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDT 60
Query: 86 FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVR 145
E+ A+PN NS RG +VV+ IK +E +CP VSCADILAIAA + V+ GGP W V
Sbjct: 61 IESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVP 120
Query: 146 LGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFR 205
LG +P P NL+ L +SF+ QGL+ ++V L+GGHT G+ARC++F
Sbjct: 121 LGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFI 180
Query: 206 GHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXX 258
+YN SN ++T++ L+ RCP+ + L NLD TP FD
Sbjct: 181 NRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLN 240
Query: 259 XXXHSDQELFNGNSADF--LVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRINCR 316
SDQELF+ AD +V ++++ + FF +F MIKMGNI LTG G+IR+ C
Sbjct: 241 GLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCN 300
Query: 317 KIN 319
+N
Sbjct: 301 FVN 303
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 163/302 (53%), Gaps = 9/302 (2%)
Query: 27 LSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANF 86
L +Y ++CP A S+V+ + AA N + + L+R+HFHDCFV GCD SVLLD TAN
Sbjct: 2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANN 61
Query: 87 IGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRL 146
EK A+PNN S RGF V+ K+ +E ACP+ VSCADILA AARDS + G +++V
Sbjct: 62 TAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPS 121
Query: 147 GXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRG 206
G IP P N + LI+SF+ + L+ MV L+G H++G A C+SF
Sbjct: 122 GRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTN 181
Query: 207 HIYN-------DSNIDTSFARSLQQRCPRRGN--DNVLANLDRQTPTCFDXXXXXXXXXX 257
+YN D + S+A L+ CP + +LD TP+ D
Sbjct: 182 RLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLT 241
Query: 258 XXXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRINCRK 317
SDQ L + VK A +++ + FA+ M+KMG I+ LTG+ G+IR NC
Sbjct: 242 LGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSV 301
Query: 318 IN 319
+N
Sbjct: 302 VN 303
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 197 bits (500), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 163/294 (55%), Gaps = 6/294 (2%)
Query: 27 LSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANF 86
LS ++Y TCP+A SIVR + A++ + + A LLRLHFHDCFV GCD SVLLD +A
Sbjct: 9 LSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATG 68
Query: 87 IGEKTAVPN-NNSARGFNVVDQIKANLEKACP-RVVSCADILAIAARDSVVVFGGPSWKV 144
GE+ A PN F V+ I+ LE+ C VVSC+DILA+AARDSVVV GGP ++V
Sbjct: 69 PGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDYRV 128
Query: 145 RLGXXXXXX-XXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTS 203
LG +P P+SN+ +L++ GL ++V ++GGHT+G A C+S
Sbjct: 129 PLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAHCSS 188
Query: 204 FRGHIY--NDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXX 261
F ++ D I +F L++ CP +G D LD +TP FD
Sbjct: 189 FEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTV-LDVRTPNVFDNKYYIDLVNREGLF 247
Query: 262 HSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRINC 315
SDQ+LF +V+R+A S FF+ F + KMG ++ T G++R NC
Sbjct: 248 VSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNC 301
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 16/194 (8%)
Query: 37 PKALSIVRAGIIAAIKNETRVGASLLRLHFH-----DCFVNGCDGSVLLDDTANFIGEKT 91
P + +RA I I + +G SL+RL +H DCF DGS ++A+ +
Sbjct: 6 PFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKK--DGSP---NSASMRFKPE 60
Query: 92 AVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXX 151
+ N +G ++ + L+K P+ +S AD+ +AA ++ GGP+ G
Sbjct: 61 CLYAGN--KGLDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDA 117
Query: 152 XXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARC--TSFRGHIY 209
+P + S + F G + + VAL G HT G+ + + G
Sbjct: 118 KDGSVCGPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGETHIEFSGYHGPWT 177
Query: 210 NDSN-IDTSFARSL 222
+D N D SF L
Sbjct: 178 HDKNGFDNSFFTQL 191
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 16/194 (8%)
Query: 37 PKALSIVRAGIIAAIKNETRVGASLLRLHFH-----DCFVNGCDGSVLLDDTANFIGEKT 91
P + +RA I I + +G SL+RL +H DCF DGS ++A+ +
Sbjct: 5 PFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKK--DGSP---NSASMRFKPE 59
Query: 92 AVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXX 151
+ N +G ++ + L+K P+ +S AD+ +AA ++ GGP+ G
Sbjct: 60 CLYAGN--KGLDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDA 116
Query: 152 XXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARC--TSFRGHIY 209
+P + S + F G + + VAL G HT G+ + + G
Sbjct: 117 KDGSVCGPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGPWT 176
Query: 210 NDSN-IDTSFARSL 222
+D N D SF L
Sbjct: 177 HDKNGFDNSFFTQL 190
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 16/194 (8%)
Query: 37 PKALSIVRAGIIAAIKNETRVGASLLRLHFH-----DCFVNGCDGSVLLDDTANFIGEKT 91
P + +RA I I + +G SL+RL +H DCF DGS ++A+ +
Sbjct: 6 PFDIRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKK--DGSP---NSASMRFKPE 60
Query: 92 AVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXX 151
+ N +G ++ + L+K P+ +S AD+ +AA ++ GGP+ G
Sbjct: 61 CLYAGN--KGLDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDA 117
Query: 152 XXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARC--TSFRGHIY 209
+P + S + F G + + VAL G HT G+ + + G
Sbjct: 118 KDGSVCGPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGPWT 177
Query: 210 NDSN-IDTSFARSL 222
+D N D SF L
Sbjct: 178 HDKNGFDNSFFTQL 191
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 83/212 (39%), Gaps = 50/212 (23%)
Query: 101 GFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXX 160
G ++ ++ +++ P +VS AD +A +V + GGP G
Sbjct: 72 GLDIAVRLLEPIKEQFP-IVSYADFYQLAGVVAVEITGGPEVPFHPGREDKPE------- 123
Query: 161 XXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKARC--TSFRGHIYN 210
PPP L L F A GLS +++VAL+GGHT+G A + F G +
Sbjct: 124 ---PPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTS 180
Query: 211 DSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFN 269
+ I D S+ L G + L L SD+ L
Sbjct: 181 NPLIFDNSYFTEL-----LTGEKDGLLQLP-----------------------SDKALLT 212
Query: 270 GNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
+ LV++YAA VFF D+A +K+ +
Sbjct: 213 DSVFRPLVEKYAADEDVFFADYAEAHLKLSEL 244
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 76/203 (37%), Gaps = 49/203 (24%)
Query: 120 VSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPP--PTSNLSALISSF 177
V+ AD+ +A+ ++ GGP ++ G +P P S L F
Sbjct: 87 VTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLRDVF 146
Query: 178 SAQGLSLKNMVALAGGHTVGKARC---------TSFR--------GHIYNDS--NIDTSF 218
GL+ K +VAL+G HT+G++R T + G + D S+
Sbjct: 147 YRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSY 206
Query: 219 ARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFNGNSADFLVK 278
+ +++ RR D ++ PT D LF S +
Sbjct: 207 FKDIKE---RRDEDLLV------LPT-------------------DAALFEDPSFKVYAE 238
Query: 279 RYAASISVFFKDFARGMIKMGNI 301
+YAA FFKD+A K+ N+
Sbjct: 239 KYAADPEAFFKDYAEAHAKLSNL 261
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 99/283 (34%), Gaps = 62/283 (21%)
Query: 32 YKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDC--FVNGCDGSVLLDDTANFIGE 89
Y+ KA +R G IA E R +LRL +H F G T E
Sbjct: 23 YQKAVEKAKKKLR-GFIA----EKRCAPLMLRLAWHSAGTFDKGTKTGGPFG-TIKHPAE 76
Query: 90 KTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXX 149
NN +++ +KA ++S AD +A +V V GGP G
Sbjct: 77 LAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 131
Query: 150 XXXXXXXXXXXXXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKA-- 199
PPP L L F A GL+ +++VAL+GGHT+G A
Sbjct: 132 DKPE----------PPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHK 181
Query: 200 RCTSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXX 258
+ F G ++ I D S+ L G L L
Sbjct: 182 EASGFEGPWTSNPLIFDNSYFTELLS-----GEKEGLLQLP------------------- 217
Query: 259 XXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
SD+ L + LV +YAA FF D+A K+ +
Sbjct: 218 ----SDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 99/283 (34%), Gaps = 62/283 (21%)
Query: 32 YKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDC--FVNGCDGSVLLDDTANFIGE 89
Y+ KA +R G IA E R +LRL +H F G T E
Sbjct: 23 YQKAVEKAKKKLR-GFIA----EKRCAPLMLRLAWHSAGTFDKGTKTGGPFG-TIKHPAE 76
Query: 90 KTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXX 149
NN +++ +KA ++S AD +A +V V GGP G
Sbjct: 77 LAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 131
Query: 150 XXXXXXXXXXXXXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKARC 201
PPP L L F A GL+ +++VAL+GGHT+G A
Sbjct: 132 DKPE----------PPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHK 181
Query: 202 --TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXX 258
+ F G ++ I D S+ L G L L
Sbjct: 182 ERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGLLQLP------------------- 217
Query: 259 XXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
SD+ L + LV +YAA FF D+A K+ +
Sbjct: 218 ----SDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 99/283 (34%), Gaps = 62/283 (21%)
Query: 32 YKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDC--FVNGCDGSVLLDDTANFIGE 89
Y+ KA +R G IA E R +LRL +H F G T E
Sbjct: 23 YQKAVEKAKKKLR-GFIA----EKRCAPLMLRLAWHSAGTFDKGTKTGGPFG-TIKHPAE 76
Query: 90 KTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXX 149
NN +++ +KA ++S AD +A +V V GGP G
Sbjct: 77 LAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 131
Query: 150 XXXXXXXXXXXXXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKARC 201
PPP L L F A GL+ +++VAL+GGHT+G A
Sbjct: 132 DKPE----------PPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHK 181
Query: 202 --TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXX 258
+ F G ++ I D S+ L G L L
Sbjct: 182 ERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGLLQLP------------------- 217
Query: 259 XXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
SD+ L + LV +YAA FF D+A K+ +
Sbjct: 218 ----SDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 99/283 (34%), Gaps = 62/283 (21%)
Query: 32 YKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDC--FVNGCDGSVLLDDTANFIGE 89
Y+ KA +R G IA E R +LRL +H F G T E
Sbjct: 11 YQKAVEKAKKKLR-GFIA----EKRCAPLMLRLAWHSAGTFDKGTKTGGPFG-TIKHPAE 64
Query: 90 KTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXX 149
NN +++ +KA ++S AD +A +V V GGP G
Sbjct: 65 LAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 119
Query: 150 XXXXXXXXXXXXXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKARC 201
PPP L L F A GL+ +++VAL+GGHT+G A
Sbjct: 120 DKPE----------PPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHK 169
Query: 202 --TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXX 258
+ F G ++ I D S+ L G L L
Sbjct: 170 ERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGLLQLP------------------- 205
Query: 259 XXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
SD+ L + LV +YAA FF D+A K+ +
Sbjct: 206 ----SDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSEL 244
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 99/283 (34%), Gaps = 62/283 (21%)
Query: 32 YKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDC--FVNGCDGSVLLDDTANFIGE 89
Y+ KA +R G IA E R +L+L +H F G T E
Sbjct: 11 YQKAVEKAKKKLR-GFIA----EKRCAPLMLKLAWHSAGTFDKGTKTGGPFG-TIKHPAE 64
Query: 90 KTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXX 149
NN +++ +KA ++S AD +A +V V GGP G
Sbjct: 65 LAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 119
Query: 150 XXXXXXXXXXXXXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKARC 201
PPP L L F A GL+ +++VAL+GGHT+G A
Sbjct: 120 DKPE----------PPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHK 169
Query: 202 --TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXX 258
+ F G ++ I D S+ L G L L
Sbjct: 170 ERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGLLQLP------------------- 205
Query: 259 XXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
SD+ L + LV +YAA FF D+A K+ +
Sbjct: 206 ----SDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSEL 244
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 98/283 (34%), Gaps = 62/283 (21%)
Query: 32 YKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDC--FVNGCDGSVLLDDTANFIGE 89
Y+ KA +R G IA E R +LRL H F G T E
Sbjct: 23 YQKAVEKAKKKLR-GFIA----EKRCAPLMLRLAAHSAGTFDKGTKTGGPFG-TIKHPAE 76
Query: 90 KTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXX 149
NN +++ +KA ++S AD +A +V V GGP G
Sbjct: 77 LAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPGRE 131
Query: 150 XXXXXXXXXXXXXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKARC 201
PPP L L F A GL+ +++VAL+GGHT+G A
Sbjct: 132 DKPE----------PPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHK 181
Query: 202 --TSFRGHIYNDSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXX 258
+ F G ++ I D S+ L G L L
Sbjct: 182 ERSGFEGPWTSNPLIFDNSYFTELLS-----GEKEGLLQLP------------------- 217
Query: 259 XXXHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
SD+ L + LV +YAA FF D+A K+ +
Sbjct: 218 ----SDKALLSDPVFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 78/212 (36%), Gaps = 50/212 (23%)
Query: 101 GFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXX 160
G ++ ++ L+ P ++S AD +A +V V GGP G
Sbjct: 84 GLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPE------- 135
Query: 161 XXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKARC--TSFRGHIYN 210
PPP L L F A GL+ +++VAL+GGHT+G A + F G +
Sbjct: 136 ---PPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTS 192
Query: 211 DSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFN 269
+ I D S+ L G L L SD+ L +
Sbjct: 193 NPLIFDNSYFTELLS-----GEKEGLLQLP-----------------------SDKALLS 224
Query: 270 GNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
LV +YAA FF D+A K+ +
Sbjct: 225 DPVFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 78/212 (36%), Gaps = 50/212 (23%)
Query: 101 GFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXX 160
G ++ ++ L+ P ++S AD +A +V V GGP G
Sbjct: 84 GLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPE------- 135
Query: 161 XXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKARC--TSFRGHIYN 210
PPP L L F A GL+ +++VAL+GGHT+G A + F G +
Sbjct: 136 ---PPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTS 192
Query: 211 DSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFN 269
+ I D S+ L G L L SD+ L +
Sbjct: 193 NPLIFDNSYFTELLS-----GEKEGLLQLP-----------------------SDKALLS 224
Query: 270 GNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
LV +YAA FF D+A K+ +
Sbjct: 225 DPVFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 78/212 (36%), Gaps = 50/212 (23%)
Query: 101 GFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXX 160
G ++ ++ L+ P ++S AD +A +V V GGP G
Sbjct: 84 GLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPE------- 135
Query: 161 XXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKARC--TSFRGHIYN 210
PPP L L F A GL+ +++VAL+GGHT+G A + F G +
Sbjct: 136 ---PPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTS 192
Query: 211 DSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFN 269
+ I D S+ L G L L SD+ L +
Sbjct: 193 NPLIFDNSYFTELLS-----GEKEGLLQLP-----------------------SDKALLS 224
Query: 270 GNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
LV +YAA FF D+A K+ +
Sbjct: 225 DPVFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 78/212 (36%), Gaps = 50/212 (23%)
Query: 101 GFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXX 160
G ++ ++ L+ P ++S AD +A +V V GGP G
Sbjct: 72 GLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPE------- 123
Query: 161 XXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKARC--TSFRGHIYN 210
PPP L L F A GL+ +++VAL+GGHT+G A + F G +
Sbjct: 124 ---PPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTS 180
Query: 211 DSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFN 269
+ I D S+ L G L L SD+ L +
Sbjct: 181 NPLIFDNSYFTELLS-----GEKEGLLQLP-----------------------SDKALLS 212
Query: 270 GNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
LV +YAA FF D+A K+ +
Sbjct: 213 DPVFRPLVDKYAADEDAFFADYAEAHQKLSEL 244
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 78/212 (36%), Gaps = 50/212 (23%)
Query: 101 GFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGXXXXXXXXXXXXX 160
G ++ ++ L+ P ++S AD +A +V V GGP G
Sbjct: 72 GLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPE------- 123
Query: 161 XXIPPPTSNLS-------ALISSF-SAQGLSLKNMVALAGGHTVGKARC--TSFRGHIYN 210
PPP L L F A GL+ +++VAL+GGHT+G A + F G +
Sbjct: 124 ---PPPEGRLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIGAAHKERSGFEGPWTS 180
Query: 211 DSNI-DTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDXXXXXXXXXXXXXXHSDQELFN 269
+ I D S+ L G L L SD+ L +
Sbjct: 181 NPLIFDNSYFTELLS-----GEKEGLLQLP-----------------------SDKALLS 212
Query: 270 GNSADFLVKRYAASISVFFKDFARGMIKMGNI 301
LV +YAA FF D+A K+ +
Sbjct: 213 DPVFRPLVDKYAADEDAFFADYAEAHQKLSEL 244
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,751,993
Number of Sequences: 62578
Number of extensions: 257521
Number of successful extensions: 647
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 544
Number of HSP's gapped (non-prelim): 48
length of query: 319
length of database: 14,973,337
effective HSP length: 99
effective length of query: 220
effective length of database: 8,778,115
effective search space: 1931185300
effective search space used: 1931185300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)