Query 020951
Match_columns 319
No_of_seqs 184 out of 1480
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 06:26:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020951.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020951hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 1E-106 2E-111 768.2 25.6 294 21-319 19-324 (324)
2 cd00693 secretory_peroxidase H 100.0 3.1E-99 7E-104 715.1 25.3 291 26-318 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 7.1E-72 1.5E-76 512.0 13.2 226 43-283 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 2E-69 4.4E-74 506.6 21.8 230 41-316 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.4E-66 3E-71 482.2 20.4 230 38-304 11-251 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 3.2E-65 6.9E-70 471.7 19.9 231 30-304 4-248 (250)
7 cd00692 ligninase Ligninase an 100.0 8.6E-64 1.9E-68 476.4 22.1 236 39-319 16-287 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 3.4E-63 7.4E-68 457.5 20.1 221 40-304 17-248 (251)
9 cd00314 plant_peroxidase_like 100.0 7.3E-60 1.6E-64 438.4 19.0 224 42-300 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 4.7E-57 1E-61 436.6 18.3 273 27-309 29-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 1.4E-54 2.9E-59 443.3 19.0 268 27-305 39-404 (716)
12 PRK15061 catalase/hydroperoxid 100.0 9.5E-51 2E-55 413.0 18.3 270 27-307 41-412 (726)
13 cd08201 plant_peroxidase_like_ 100.0 4.8E-51 1E-55 376.6 12.1 214 48-300 32-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 2.8E-40 6.1E-45 308.5 17.0 221 45-302 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 6.5E-35 1.4E-39 298.9 16.4 221 42-303 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 1.9E-34 4.2E-39 294.0 17.7 222 45-303 442-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 3.6E-32 7.9E-37 266.2 15.7 250 42-302 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.6 2.2E-14 4.9E-19 141.8 12.5 217 45-302 452-725 (730)
19 PTZ00411 transaldolase-like pr 72.6 35 0.00077 33.4 10.2 131 137-291 180-326 (333)
20 COG3763 Uncharacterized protei 56.1 15 0.00032 27.8 3.1 29 42-70 24-52 (71)
21 PRK05269 transaldolase B; Prov 55.7 84 0.0018 30.5 9.2 128 136-289 169-311 (318)
22 PF07172 GRP: Glycine rich pro 55.0 10 0.00023 30.2 2.4 19 1-19 1-19 (95)
23 PRK12309 transaldolase/EF-hand 54.7 1.5E+02 0.0031 29.7 10.9 88 120-224 155-258 (391)
24 TIGR00874 talAB transaldolase. 53.1 1.3E+02 0.0029 29.1 10.1 129 136-289 167-311 (317)
25 PF11895 DUF3415: Domain of un 52.0 13 0.00028 28.8 2.3 18 287-304 3-20 (80)
26 PRK00523 hypothetical protein; 41.0 78 0.0017 24.1 5.0 29 42-70 25-53 (72)
27 PRK01844 hypothetical protein; 35.7 49 0.0011 25.2 3.2 29 42-70 24-52 (72)
28 PRK12346 transaldolase A; Prov 31.6 45 0.00097 32.4 3.1 89 119-224 149-253 (316)
29 KOG0400 40S ribosomal protein 29.9 30 0.00065 29.4 1.4 33 168-200 31-64 (151)
30 PF15240 Pro-rich: Proline-ric 29.6 45 0.00097 29.8 2.5 25 9-33 3-27 (179)
31 COG0167 PyrD Dihydroorotate de 27.1 1.6E+02 0.0035 28.5 6.0 95 72-189 185-305 (310)
32 cd00439 Transaldolase Transald 24.7 64 0.0014 30.2 2.8 49 136-184 158-209 (252)
33 cd00957 Transaldolase_TalAB Tr 22.5 60 0.0013 31.5 2.2 75 119-194 148-238 (313)
34 PLN00017 photosystem I reactio 21.4 54 0.0012 25.7 1.3 20 280-299 38-57 (90)
35 PF06163 DUF977: Bacterial pro 20.4 1.3E+02 0.0029 25.3 3.5 23 172-194 16-39 (127)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=1e-106 Score=768.16 Aligned_cols=294 Identities=43% Similarity=0.749 Sum_probs=278.6
Q ss_pred hccCcccCccccccCChhHHHHHHHHHHHHHHhccchhhhHHHHhhhcccccCCCceeeccCCCCCcccccCCCCCCCcc
Q 020951 21 DQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSAR 100 (319)
Q Consensus 21 ~~~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~~~~ 100 (319)
.+++++|+++||++|||++|+||++.|++.+.++|+++|++|||+||||||+||||||||+++ .+||++++|. +++
T Consensus 19 ~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~ 94 (324)
T PLN03030 19 LVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLR 94 (324)
T ss_pred cchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-Ccc
Confidence 334567999999999999999999999999999999999999999999999999999999864 3699999998 899
Q ss_pred chhHHHHHHHHHHhhCCCCCCHHHHHHHhhhhhhhhcCCcceeeecCcCCCCccccccccCCCCCCCCCHHHHHHHHHHC
Q 020951 101 GFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGRRDSTTASRAAANTSIPPPTSNLSALISSFSAQ 180 (319)
Q Consensus 101 g~~~id~iK~~le~~cp~~VScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~ 180 (319)
||++|+.||++||+.||++|||||||||||||||+++|||.|+|++||||+++|.+.++. +||.|+.+++++++.|+++
T Consensus 95 Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~ 173 (324)
T PLN03030 95 GYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAK 173 (324)
T ss_pred hHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999877764 8999999999999999999
Q ss_pred CCChhhhHhhccCccccccccccccccccC--------CCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHH
Q 020951 181 GLSLKNMVALAGGHTVGKARCTSFRGHIYN--------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYK 252 (319)
Q Consensus 181 Gl~~~e~VaL~GaHtiG~~hc~~f~~Rl~~--------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~ 252 (319)
||+.+|||+||||||||++||.+|.+|||| ||+||+.|+++||+.||..++..+.+++|+.||.+|||+||+
T Consensus 174 Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~ 253 (324)
T PLN03030 174 GLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFS 253 (324)
T ss_pred CCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHH
Confidence 999999999999999999999999999995 899999999999999996433334678999999999999999
Q ss_pred HHhhcccccccchhcccCcchHHHHHHHhhCH----HHHHHHHHHHHHHhhcCCCCCCCCCccccccccCC
Q 020951 253 NLLNKKGLLHSDQELFNGNSADFLVKRYAASI----SVFFKDFARGMIKMGNIKPLTGSAGQIRINCRKIN 319 (319)
Q Consensus 253 ~l~~~~gll~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 319 (319)
||+.++|+|+|||+|+.|++|+++|++||.|+ +.|+++|++||+|||+|+|+||++|||||+|+++|
T Consensus 254 nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 254 NLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 99999999999999999999999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=3.1e-99 Score=715.12 Aligned_cols=291 Identities=55% Similarity=0.941 Sum_probs=280.1
Q ss_pred ccCccccccCChhHHHHHHHHHHHHHHhccchhhhHHHHhhhcccccCCCceeeccCCCCCcccccCCCCCCCccchhHH
Q 020951 26 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVV 105 (319)
Q Consensus 26 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~i 105 (319)
||+++||++|||++|+||+++|++.+.++++++|+||||+||||||+||||||||+++.++.+|+++++|. +++||++|
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~-~l~g~~~i 79 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNL-SLRGFDVI 79 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCC-CcchhHHH
Confidence 69999999999999999999999999999999999999999999999999999999887778899999998 78999999
Q ss_pred HHHHHHHHhhCCCCCCHHHHHHHhhhhhhhhcCCcceeeecCcCCCCccccccccCCCCCCCCCHHHHHHHHHHCCCChh
Q 020951 106 DQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGRRDSTTASRAAANTSIPPPTSNLSALISSFSAQGLSLK 185 (319)
Q Consensus 106 d~iK~~le~~cp~~VScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~ 185 (319)
+.||+++|+.||++||||||||||||+||+++|||.|+|++||+|+++|.+..+ +.||+|+.+++++++.|+++||+++
T Consensus 80 ~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~ 158 (298)
T cd00693 80 DDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVT 158 (298)
T ss_pred HHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999999999999999999999999998877665 7899999999999999999999999
Q ss_pred hhHhhccCccccccccccccccccC-------CCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHHHHhhcc
Q 020951 186 NMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLLNKK 258 (319)
Q Consensus 186 e~VaL~GaHtiG~~hc~~f~~Rl~~-------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~ 258 (319)
|||+|+||||||++||.+|.+|+|+ ||+||+.|+..|++.||..+++.+.+++|+.||.+|||+||+||+.++
T Consensus 159 d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~~ 238 (298)
T cd00693 159 DLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR 238 (298)
T ss_pred HheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhcc
Confidence 9999999999999999999999984 899999999999999997544556789999999999999999999999
Q ss_pred cccccchhcccCcchHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCCCccccccccC
Q 020951 259 GLLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRINCRKI 318 (319)
Q Consensus 259 gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 318 (319)
|+|+|||+|+.|++|+++|++||.||+.|+++|++||+||++++|+||.+||||++|+++
T Consensus 239 glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 239 GLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=7.1e-72 Score=512.02 Aligned_cols=226 Identities=53% Similarity=0.904 Sum_probs=207.3
Q ss_pred HHHHHHHHHHhccchhhhHHHHhhhcccc-cCCCceeeccCCCCCcccccCCCCCCCcc-chhHHHHHHHHHHhhCCCCC
Q 020951 43 VRAGIIAAIKNETRVGASLLRLHFHDCFV-NGCDGSVLLDDTANFIGEKTAVPNNNSAR-GFNVVDQIKANLEKACPRVV 120 (319)
Q Consensus 43 V~~~v~~~~~~~~~~aa~llRl~FHDc~v-~GcDgSill~~~~~~~~E~~~~~N~~~~~-g~~~id~iK~~le~~cp~~V 120 (319)
||++|++.+.++++++|+||||+|||||+ +|||||||+. .+|+++++|. +++ |+++|+.||+++|+.||++|
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~-gl~~~~~~i~~ik~~~~~~cp~~V 74 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNR-GLRDGFDVIDPIKAKLEAACPGVV 74 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGT-THHHHHHHHHHHHHHHCHHSTTTS
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----cccccccccc-CcceeeechhhHHhhhcccccCCC
Confidence 79999999999999999999999999999 9999999983 4699999999 565 99999999999999999999
Q ss_pred CHHHHHHHhhhhhhhhcCCcceeeecCcCCCCccccccccCCCCCCCCCHHHHHHHHHHCCCChhhhHhhccCccccccc
Q 020951 121 SCADILAIAARDSVVVFGGPSWKVRLGRRDSTTASRAAANTSIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKAR 200 (319)
Q Consensus 121 ScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~GaHtiG~~h 200 (319)
||||||+||||+||+.+|||.|+|++||+|++++.+.++ .+||.|..+++++++.|+++|||++|||||+||||||++|
T Consensus 75 S~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~ 153 (230)
T PF00141_consen 75 SCADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAH 153 (230)
T ss_dssp -HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEES
T ss_pred CHHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceecccccccce
Confidence 999999999999999999999999999999999999776 6799999999999999999999999999999999999999
Q ss_pred cccccccccC--CCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHHHHhhcccccccchhcccCcchHHHHH
Q 020951 201 CTSFRGHIYN--DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLLNKKGLLHSDQELFNGNSADFLVK 278 (319)
Q Consensus 201 c~~f~~Rl~~--dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~gll~SD~~L~~d~~t~~~V~ 278 (319)
|.+|. |+|. ||+||+.|+.+ .| ..+++. .+++| ||.+|||+||+++++++|+|+||++|++|++|+++|+
T Consensus 154 c~~f~-rl~~~~dp~~d~~~~~~---~C-~~~~~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~V~ 225 (230)
T PF00141_consen 154 CSSFS-RLYFPPDPTMDPGYAGQ---NC-NSGGDN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPIVE 225 (230)
T ss_dssp GGCTG-GTSCSSGTTSTHHHHHH---SS-STSGCT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHHHH
T ss_pred ecccc-cccccccccccccccee---cc-CCCccc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHHHH
Confidence 99999 9995 89999999988 99 443333 67888 9999999999999999999999999999999999999
Q ss_pred HHhhC
Q 020951 279 RYAAS 283 (319)
Q Consensus 279 ~yA~d 283 (319)
+||+|
T Consensus 226 ~yA~d 230 (230)
T PF00141_consen 226 RYAQD 230 (230)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 99986
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=2e-69 Score=506.64 Aligned_cols=230 Identities=28% Similarity=0.431 Sum_probs=208.6
Q ss_pred HHHHHHHHHHHHhccchhhhHHHHhhhccc-------ccCCCceeeccCCCCCcccccCCCCCCCc-cchhHHHHHHHHH
Q 020951 41 SIVRAGIIAAIKNETRVGASLLRLHFHDCF-------VNGCDGSVLLDDTANFIGEKTAVPNNNSA-RGFNVVDQIKANL 112 (319)
Q Consensus 41 ~iV~~~v~~~~~~~~~~aa~llRl~FHDc~-------v~GcDgSill~~~~~~~~E~~~~~N~~~~-~g~~~id~iK~~l 112 (319)
+.++++|++ +.++|.++|.||||+||||| ++||||||+++ +|+++++|. ++ +||++|+.||+++
T Consensus 15 ~~~~~~~~~-~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~-gL~~g~~vid~iK~~~ 86 (289)
T PLN02608 15 EKARRDLRA-LIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANN-GLKIAIDLCEPVKAKH 86 (289)
T ss_pred HHHHHHHHH-HHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCcccc-chHHHHHHHHHHHHHc
Confidence 456677744 67799999999999999999 89999999984 599999998 55 7999999999987
Q ss_pred HhhCCCCCCHHHHHHHhhhhhhhhcCCcceeeecCcCCCCccccccccCCCCCCCCCHHHHHHHHHHCCCChhhhHhhcc
Q 020951 113 EKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGRRDSTTASRAAANTSIPPPTSNLSALISSFSAQGLSLKNMVALAG 192 (319)
Q Consensus 113 e~~cp~~VScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~G 192 (319)
++|||||||+||||+||+++|||.|+|++||+|++++.+ +++||+|+.+++++++.|+++||+++|||+|+|
T Consensus 87 -----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsG 158 (289)
T PLN02608 87 -----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSG 158 (289)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhcc
Confidence 489999999999999999999999999999999999863 458999999999999999999999999999999
Q ss_pred Cccccccccccccccc-cCCCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHHHHhhc--ccc--cccchhc
Q 020951 193 GHTVGKARCTSFRGHI-YNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLLNK--KGL--LHSDQEL 267 (319)
Q Consensus 193 aHtiG~~hc~~f~~Rl-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~--~gl--l~SD~~L 267 (319)
|||||++||. |+ |+ + +++ .||.+|||+||++++.+ +|+ |+|||+|
T Consensus 159 AHTiG~ahc~----r~g~~--------------------g-----~~~-~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L 208 (289)
T PLN02608 159 GHTLGRAHPE----RSGFD--------------------G-----PWT-KEPLKFDNSYFVELLKGESEGLLKLPTDKAL 208 (289)
T ss_pred cccccccccc----CCCCC--------------------C-----CCC-CCCCccChHHHHHHHcCCcCCccccccCHhh
Confidence 9999999995 33 10 0 233 69999999999999998 788 7999999
Q ss_pred ccCcchHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCCCccccccc
Q 020951 268 FNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRINCR 316 (319)
Q Consensus 268 ~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 316 (319)
+.|++|+++|++||.||+.|+++|++||+||++++|+||++||+.+.-+
T Consensus 209 ~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 209 LEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred hcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 9999999999999999999999999999999999999999999987653
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.4e-66 Score=482.25 Aligned_cols=230 Identities=26% Similarity=0.400 Sum_probs=207.2
Q ss_pred hHHHHHHHHHHHHHHhccchhhhHHHHhhhcccccCCCceeeccCC---CCCcccccCCCCCCCccchhHHHHHHHHHHh
Q 020951 38 KALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDT---ANFIGEKTAVPNNNSARGFNVVDQIKANLEK 114 (319)
Q Consensus 38 ~~e~iV~~~v~~~~~~~~~~aa~llRl~FHDc~v~GcDgSill~~~---~~~~~E~~~~~N~~~~~g~~~id~iK~~le~ 114 (319)
..++||++.|++.+. +++++|+||||+||||| +||+|+++++. ..+.+|+++++|.++.+||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~--~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSG--TYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHh--ccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 567899999999999 99999999999999999 48877777432 23457999999984449999999999986
Q ss_pred hCCCCCCHHHHHHHhhhhhhhhcCCcceeeecCcCCCCccccccccCCCCCCCCCHHHHHHHHHHCCCChhhhHhhccCc
Q 020951 115 ACPRVVSCADILAIAARDSVVVFGGPSWKVRLGRRDSTTASRAAANTSIPPPTSNLSALISSFSAQGLSLKNMVALAGGH 194 (319)
Q Consensus 115 ~cp~~VScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~GaH 194 (319)
| +|||||||+||||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++||+++|||+|+|||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaH 162 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAH 162 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcccc
Confidence 4 8999999999999999999999999999999999998777778899999999999999999999999999999999
Q ss_pred cccccccccccccccCCCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHHHHhhccc--------ccccchh
Q 020951 195 TVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLLNKKG--------LLHSDQE 266 (319)
Q Consensus 195 tiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~g--------ll~SD~~ 266 (319)
|||++||..+ . + . + ++ ..||.+|||+||+||+.++| +|+||++
T Consensus 163 TiG~a~c~~~--~-~-------------------~-g-----~~-~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~sD~~ 213 (253)
T cd00691 163 TLGRCHKERS--G-Y-------------------D-G-----PW-TKNPLKFDNSYFKELLEEDWKLPTPGLLMLPTDKA 213 (253)
T ss_pred eeecccccCC--C-C-------------------C-C-----CC-CCCCCcccHHHHHHHhcCCCccCcCcceechhhHH
Confidence 9999999531 0 0 0 1 12 26999999999999999999 9999999
Q ss_pred cccCcchHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCC
Q 020951 267 LFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPL 304 (319)
Q Consensus 267 L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 304 (319)
|+.|++|+++|++||.|++.|+++|++||+||++++|.
T Consensus 214 L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 214 LLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred HHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999985
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=3.2e-65 Score=471.67 Aligned_cols=231 Identities=30% Similarity=0.467 Sum_probs=206.3
Q ss_pred cccccC--ChhHHHHHHHHHHHHHHhccchhhhHHHHhhh-----ccccc--CCCceeeccCCCCCcccccCCCCCCCcc
Q 020951 30 NYYKST--CPKALSIVRAGIIAAIKNETRVGASLLRLHFH-----DCFVN--GCDGSVLLDDTANFIGEKTAVPNNNSAR 100 (319)
Q Consensus 30 ~fY~~s--CP~~e~iV~~~v~~~~~~~~~~aa~llRl~FH-----Dc~v~--GcDgSill~~~~~~~~E~~~~~N~~~~~ 100 (319)
+||..+ |+.+++.+++.+++.+ .+++++|.||||+|| ||+++ ||||||.+ .+|+++++|.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~~ 76 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIHI 76 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHHH
Confidence 566643 8899999999999988 789999999999999 88876 99999954 35999999985458
Q ss_pred chhHHHHHHHHHHhhCCCCCCHHHHHHHhhhhhhhhcCCcceeeecCcCCCCccccccccCCCCCCCCCHHHHHHHHHH-
Q 020951 101 GFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGRRDSTTASRAAANTSIPPPTSNLSALISSFSA- 179 (319)
Q Consensus 101 g~~~id~iK~~le~~cp~~VScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~- 179 (319)
||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+ ++.||.|+.+++++++.|++
T Consensus 77 ~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~ 148 (250)
T PLN02364 77 ALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAKQ 148 (250)
T ss_pred HHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHHh
Confidence 999999999998 489999999999999999999999999999999999864 45799999999999999997
Q ss_pred CCCChhhhHhhccCccccccccccccccccCCCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHHHHhhc--
Q 020951 180 QGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLLNK-- 257 (319)
Q Consensus 180 ~Gl~~~e~VaL~GaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~-- 257 (319)
+|||++|||+|+||||||++|| +|+. + .+ +++ .||.+|||+||++|+.+
T Consensus 149 ~Gl~~~d~VaLsGaHTiG~~hc----~r~~----~---------------~g-----~~~-~tp~~fDn~Yy~~ll~~~~ 199 (250)
T PLN02364 149 MGLSDKDIVALSGAHTLGRCHK----DRSG----F---------------EG-----AWT-SNPLIFDNSYFKELLSGEK 199 (250)
T ss_pred cCCCHHHheeeecceeeccccC----CCCC----C---------------CC-----CCC-CCCCccchHHHHHHhcCCc
Confidence 6999999999999999999999 2320 0 01 233 69999999999999998
Q ss_pred ccccc--cchhcccCcchHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCC
Q 020951 258 KGLLH--SDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPL 304 (319)
Q Consensus 258 ~gll~--SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 304 (319)
+|+|. |||+|+.|++|+.+|++||.||+.|+++|++||+||+++++-
T Consensus 200 ~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 200 EGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred CCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 89875 999999999999999999999999999999999999999973
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=8.6e-64 Score=476.37 Aligned_cols=236 Identities=24% Similarity=0.353 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHHHhcc---chhhhHHHHhhhcccc------------cCCCceeeccCCCCCcccccCCCCCCCccchh
Q 020951 39 ALSIVRAGIIAAIKNET---RVGASLLRLHFHDCFV------------NGCDGSVLLDDTANFIGEKTAVPNNNSARGFN 103 (319)
Q Consensus 39 ~e~iV~~~v~~~~~~~~---~~aa~llRl~FHDc~v------------~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~ 103 (319)
+|..|+++|++.+..+. ..|+.+|||+||||++ +|||||||++++ .|+++++|. +++ +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~-gL~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANI-GLD--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCC-CHH--H
Confidence 68899999999998554 4678899999999996 899999999753 599999998 555 8
Q ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHhhhhhhh-hcCCcceeeecCcCCCCccccccccCCCCCCCCCHHHHHHHHHHCCC
Q 020951 104 VVDQIKANLEKACPRVVSCADILAIAARDSVV-VFGGPSWKVRLGRRDSTTASRAAANTSIPPPTSNLSALISSFSAQGL 182 (319)
Q Consensus 104 ~id~iK~~le~~cp~~VScADiialaar~Av~-~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 182 (319)
+|+.||..+|+.| |||||||+||||+||+ ..|||.|+|++||+|++++.+ ++.||.|+.++++|++.|+++||
T Consensus 89 vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf 162 (328)
T cd00692 89 IVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGF 162 (328)
T ss_pred HHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCC
Confidence 9999999999998 9999999999999999 569999999999999999864 45799999999999999999999
Q ss_pred ChhhhHhhccCccccccccccccccccCCCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHHHHh-hccc--
Q 020951 183 SLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL-NKKG-- 259 (319)
Q Consensus 183 ~~~e~VaL~GaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~-~~~g-- 259 (319)
+++|||+|+||||||++|. + ||+++ .++|| .||.+|||+||+|++ .+++
T Consensus 163 ~~~E~VaLsGAHTiG~a~~------~--Dps~~-------------------g~p~D-~TP~~FDn~Yf~~ll~~~~~~~ 214 (328)
T cd00692 163 SPDELVALLAAHSVAAQDF------V--DPSIA-------------------GTPFD-STPGVFDTQFFIETLLKGTAFP 214 (328)
T ss_pred CHHHHhhhcccccccccCC------C--CCCCC-------------------CCCCC-CCcchhcHHHHHHHHHcCCCCC
Confidence 9999999999999999992 1 66664 14788 699999999999988 4555
Q ss_pred -----------------ccccchhcccCcchHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCCCCCCCccccccccCC
Q 020951 260 -----------------LLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPLTGSAGQIRINCRKIN 319 (319)
Q Consensus 260 -----------------ll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 319 (319)
+|+||++|+.|++|+.+|++||.||++|+++|++||+||++|||. ...+.+|+.|+
T Consensus 215 g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs~v~ 287 (328)
T cd00692 215 GSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCSDVI 287 (328)
T ss_pred CccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCcccC
Confidence 499999999999999999999999999999999999999999986 44788999875
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=3.4e-63 Score=457.53 Aligned_cols=221 Identities=28% Similarity=0.442 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHhccchhhhHHHHhhhcccc-------cCCCceeeccCCCCCcccccCCCCCCCccchhHHHHHHHHH
Q 020951 40 LSIVRAGIIAAIKNETRVGASLLRLHFHDCFV-------NGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANL 112 (319)
Q Consensus 40 e~iV~~~v~~~~~~~~~~aa~llRl~FHDc~v-------~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~id~iK~~l 112 (319)
.+-+++.+.+.+ ++...+|.+|||+||||.+ |||||||++. .|+++++|.++..++++|+.||+++
T Consensus 17 ~~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~~~~~~i~~iK~~~ 89 (251)
T PLN02879 17 VQRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLDIAVRLLDPIKELF 89 (251)
T ss_pred HHHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChHHHHHHHHHHHHHc
Confidence 345677788876 4578999999999999974 8999999874 4999999995444999999999987
Q ss_pred HhhCCCCCCHHHHHHHhhhhhhhhcCCcceeeecCcCCCCccccccccCCCCCCCCCHHHHHHHHHHCCCChhhhHhhcc
Q 020951 113 EKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGRRDSTTASRAAANTSIPPPTSNLSALISSFSAQGLSLKNMVALAG 192 (319)
Q Consensus 113 e~~cp~~VScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~G 192 (319)
++|||||||+||||+||+++|||.|+|++||+|++++.+ +++||+|+.+++++++.|+++||+++|||||+|
T Consensus 90 -----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsG 161 (251)
T PLN02879 90 -----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDKDIVALSG 161 (251)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeec
Confidence 489999999999999999999999999999999998854 468999999999999999999999999999999
Q ss_pred CccccccccccccccccCCCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHHHHhhc--ccc--cccchhcc
Q 020951 193 GHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLLNK--KGL--LHSDQELF 268 (319)
Q Consensus 193 aHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~--~gl--l~SD~~L~ 268 (319)
|||||++||. |. +.. .+|| .||.+|||+||++|+.+ +|+ |+||++|+
T Consensus 162 aHTiG~ah~~----r~---------------------g~~---g~~d-~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL~ 212 (251)
T PLN02879 162 GHTLGRCHKE----RS---------------------GFE---GAWT-PNPLIFDNSYFKEILSGEKEGLLQLPTDKALL 212 (251)
T ss_pred cccccccccc----cc---------------------cCC---CCCC-CCccceeHHHHHHHHcCCcCCCccchhhHHHh
Confidence 9999999995 21 001 1355 69999999999999999 888 67999999
Q ss_pred cCcchHHHHHHHhhCHHHHHHHHHHHHHHhhcCCCC
Q 020951 269 NGNSADFLVKRYAASISVFFKDFARGMIKMGNIKPL 304 (319)
Q Consensus 269 ~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 304 (319)
.|++|+++|++||.||+.|+++|++||+||++||+.
T Consensus 213 ~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 213 DDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred cCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999999999999985
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=7.3e-60 Score=438.44 Aligned_cols=224 Identities=36% Similarity=0.511 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHhccchhhhHHHHhhhccccc--------CCCceeeccCCCCCcccccCCCCCCCccchhHHHHHHHHHH
Q 020951 42 IVRAGIIAAIKNETRVGASLLRLHFHDCFVN--------GCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLE 113 (319)
Q Consensus 42 iV~~~v~~~~~~~~~~aa~llRl~FHDc~v~--------GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~id~iK~~le 113 (319)
.|++.|++.+.+++.+++++|||+||||++. ||||||++++ |+++++|.++.+++++|+.||+++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~------e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP------ELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc------cccCcccccHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999986 9999999974 9999999866799999999999999
Q ss_pred hhCCCCCCHHHHHHHhhhhhhhhc--CCcceeeecCcCCCCccc--cccccCCCCCCCCCHHHHHHHHHHCCCChhhhHh
Q 020951 114 KACPRVVSCADILAIAARDSVVVF--GGPSWKVRLGRRDSTTAS--RAAANTSIPPPTSNLSALISSFSAQGLSLKNMVA 189 (319)
Q Consensus 114 ~~cp~~VScADiialaar~Av~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~Va 189 (319)
. |++|||||||+||+++||+.+ |||.|+|++||+|++.+. ...+...+|.|..+++++++.|+++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 899999999999999999999 999999999999999764 3344567888889999999999999999999999
Q ss_pred hc-cCccc-cccccccccccccCCCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHHHHhhcc---------
Q 020951 190 LA-GGHTV-GKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLLNKK--------- 258 (319)
Q Consensus 190 L~-GaHti-G~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~--------- 258 (319)
|+ ||||| |++||..+..|+ | .+++.||.+|||+||++++.++
T Consensus 154 L~~GaHti~G~~~~~~~~~~~-----------------~----------~~~~~tp~~fDN~yy~~l~~~~~~~~~~~~~ 206 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEG-----------------S----------GLWTSTPFTFDNAYFKNLLDMNWEWRVGSPD 206 (255)
T ss_pred hccCCeeccCcccCCCCCccc-----------------C----------CCCCCCCCccchHHHHHHhcCCcccccCCcc
Confidence 99 99999 999999887663 2 2345899999999999999988
Q ss_pred -------cccccchhcccCcchHHHHHHHhhCHHHHHHHHHHHHHHhhc
Q 020951 259 -------GLLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMGN 300 (319)
Q Consensus 259 -------gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 300 (319)
++|+||++|+.|++|+.+|++||.|++.|+++|++||+||++
T Consensus 207 ~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 207 PDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred CCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=4.7e-57 Score=436.63 Aligned_cols=273 Identities=21% Similarity=0.317 Sum_probs=234.5
Q ss_pred cCccc-cccCChhH-HHHHHHHHHHHHHhc--------cchhhhHHHHhhhcccc-------cCCC-ceeeccCCCCCcc
Q 020951 27 LSTNY-YKSTCPKA-LSIVRAGIIAAIKNE--------TRVGASLLRLHFHDCFV-------NGCD-GSVLLDDTANFIG 88 (319)
Q Consensus 27 L~~~f-Y~~sCP~~-e~iV~~~v~~~~~~~--------~~~aa~llRl~FHDc~v-------~GcD-gSill~~~~~~~~ 88 (319)
+-.+| |.+.+-.. -+.|+++|++.+... ...+|-+|||+|||+.+ ||++ |+|.+. +
T Consensus 29 ~~~~~~~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------p 102 (409)
T cd00649 29 MGEDFNYAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------P 102 (409)
T ss_pred CCCCCCHHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------c
Confidence 33344 44444333 268899999999864 47899999999999985 8997 788876 5
Q ss_pred cccCCCCCCCccchhHHHHHHHHHHhhCCCCCCHHHHHHHhhhhhhhhcCCcceeeecCcCCCCccccc-----------
Q 020951 89 EKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGRRDSTTASRA----------- 157 (319)
Q Consensus 89 E~~~~~N~~~~~g~~~id~iK~~le~~cp~~VScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~~~----------- 157 (319)
|++++.|.++.+++.+++.||+++. ..||+||+|+||+..||+.+|||.|+|..||.|...+...
T Consensus 103 e~~~~~N~gL~~a~~~L~pik~k~~----~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~ 178 (409)
T cd00649 103 LNSWPDNVNLDKARRLLWPIKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLA 178 (409)
T ss_pred ccCcHhhhhHHHHHHHHHHHHHHcC----CCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhccc
Confidence 9999999977788899999998864 4799999999999999999999999999999999765320
Q ss_pred ------------------------cccC--CCCCCCCCHHHHHHHHHHCCCChhhhHhh-ccCccccccccccccccccC
Q 020951 158 ------------------------AANT--SIPPPTSNLSALISSFSAQGLSLKNMVAL-AGGHTVGKARCTSFRGHIYN 210 (319)
Q Consensus 158 ------------------------~~~~--~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL-~GaHtiG~~hc~~f~~Rl~~ 210 (319)
.+++ .||+|..++.+|++.|.+||||++||||| +||||||++||..|.+|+..
T Consensus 179 ~~~~~~~~~l~~pl~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg~ 258 (409)
T cd00649 179 DKRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVGP 258 (409)
T ss_pred ccccccchhhccchhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCCC
Confidence 0122 69999999999999999999999999999 49999999999999999999
Q ss_pred CCCCCHHHHHHHh--ccCCCCCCC-CcccCCC---CCCCcccCcHHHHHHhh----------------------------
Q 020951 211 DSNIDTSFARSLQ--QRCPRRGND-NVLANLD---RQTPTCFDNLYYKNLLN---------------------------- 256 (319)
Q Consensus 211 dp~~d~~~~~~L~--~~Cp~~~~~-~~~~~~D---~~tp~~FDn~Yy~~l~~---------------------------- 256 (319)
||++++.|++.|+ +.||...+. .....+| +.||.+|||+||++|+.
T Consensus 259 dP~~~~~~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d 338 (409)
T cd00649 259 EPEAAPIEQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPD 338 (409)
T ss_pred CCCcCHHHHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCC
Confidence 9999999999995 899964332 2344577 47999999999999998
Q ss_pred --------cccccccchhcccCcchHHHHHHHhhCHHHHHHHHHHHHHHh--hcCCCCCCCCC
Q 020951 257 --------KKGLLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKM--GNIKPLTGSAG 309 (319)
Q Consensus 257 --------~~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 309 (319)
+++||+||++|+.|++|+++|++||.|++.||++|++||+|| +++|+++-..|
T Consensus 339 ~~~~~~~~~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 339 AHDPSKKHAPMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred ccccccccCcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 568999999999999999999999999999999999999999 69999886554
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.4e-54 Score=443.33 Aligned_cols=268 Identities=21% Similarity=0.289 Sum_probs=229.3
Q ss_pred cCccc-cccCChhH-HHHHHHHHHHHHHhc--------cchhhhHHHHhhhcccc-------cCCC-ceeeccCCCCCcc
Q 020951 27 LSTNY-YKSTCPKA-LSIVRAGIIAAIKNE--------TRVGASLLRLHFHDCFV-------NGCD-GSVLLDDTANFIG 88 (319)
Q Consensus 27 L~~~f-Y~~sCP~~-e~iV~~~v~~~~~~~--------~~~aa~llRl~FHDc~v-------~GcD-gSill~~~~~~~~ 88 (319)
+-.+| |.+-+-+. .+.|+++|++.+... ...+|-+|||+||++.+ |||+ |+|.+. +
T Consensus 39 ~~~~f~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P 112 (716)
T TIGR00198 39 MGEDFDYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------P 112 (716)
T ss_pred CCCCccHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------c
Confidence 33344 55444332 247899999999874 46899999999999986 8885 788776 5
Q ss_pred cccCCCCCCCccchhHHHHHHHHHHhhCCCCCCHHHHHHHhhhhhhhhcCCcceeeecCcCCCCccc-------------
Q 020951 89 EKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGRRDSTTAS------------- 155 (319)
Q Consensus 89 E~~~~~N~~~~~g~~~id~iK~~le~~cp~~VScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~------------- 155 (319)
|++++.|.++.+++.+++.||++ ||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 113 ~~sw~~N~~Ldka~~lL~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~ 188 (716)
T TIGR00198 113 LNSWPDNVNLDKARRLLWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLT 188 (716)
T ss_pred ccCchhhhhHHHHHHHHHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhh
Confidence 99999999777888889888874 8899999999999999999999999999999999995432
Q ss_pred ------------------------cccccCCCCCCCCCHHHHHHHHHHCCCChhhhHhhc-cCccccccccccccccccC
Q 020951 156 ------------------------RAAANTSIPPPTSNLSALISSFSAQGLSLKNMVALA-GGHTVGKARCTSFRGHIYN 210 (319)
Q Consensus 156 ------------------------~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~-GaHtiG~~hc~~f~~Rl~~ 210 (319)
+.. ...+|+|..++++|++.|.+||||++|||||+ ||||||++||.+|.+|+..
T Consensus 189 ~~~~~~~~l~~p~a~~~~Gliyvnpeg-~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rlg~ 267 (716)
T TIGR00198 189 SSREDRESLENPLAATEMGLIYVNPEG-PDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELIGP 267 (716)
T ss_pred ccccccccccccchhhhccccccCccc-ccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccCCC
Confidence 112 22699999999999999999999999999996 9999999999999999988
Q ss_pred CCCCCHHHHHHHhccCCCCCC---CCcccCCC---CCCCcccCcHHHHHHhhc---------------------------
Q 020951 211 DSNIDTSFARSLQQRCPRRGN---DNVLANLD---RQTPTCFDNLYYKNLLNK--------------------------- 257 (319)
Q Consensus 211 dp~~d~~~~~~L~~~Cp~~~~---~~~~~~~D---~~tp~~FDn~Yy~~l~~~--------------------------- 257 (319)
||++++.|++.|+..||...+ +.....+| +.||.+|||+||+||+..
T Consensus 268 dP~~~~~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~ 347 (716)
T TIGR00198 268 DPEGAPIEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVE 347 (716)
T ss_pred CCCcCHHHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeeccccccccccc
Confidence 999999999999999985322 22234566 579999999999999974
Q ss_pred -------ccccccchhcccCcchHHHHHHHhhCHHHHHHHHHHHHHHhh--cCCCCC
Q 020951 258 -------KGLLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKMG--NIKPLT 305 (319)
Q Consensus 258 -------~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~t 305 (319)
.++|+||++|..|++++++|++||.|++.|+++|++||+||+ ++|++.
T Consensus 348 ~~~~~~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~ 404 (716)
T TIGR00198 348 DPNKKHNPIMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKS 404 (716)
T ss_pred ccccccccCccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchh
Confidence 689999999999999999999999999999999999999998 566654
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=9.5e-51 Score=413.04 Aligned_cols=270 Identities=20% Similarity=0.323 Sum_probs=229.5
Q ss_pred cCccc-cccCChhH-HHHHHHHHHHHHHhc--------cchhhhHHHHhhhcccc-------cCCC-ceeeccCCCCCcc
Q 020951 27 LSTNY-YKSTCPKA-LSIVRAGIIAAIKNE--------TRVGASLLRLHFHDCFV-------NGCD-GSVLLDDTANFIG 88 (319)
Q Consensus 27 L~~~f-Y~~sCP~~-e~iV~~~v~~~~~~~--------~~~aa~llRl~FHDc~v-------~GcD-gSill~~~~~~~~ 88 (319)
+-.+| |.+-+-.. -+.|+++|++.+... ...+|-+|||+||++.+ |||+ |+|.+. +
T Consensus 41 ~~~~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------p 114 (726)
T PRK15061 41 MGEDFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------P 114 (726)
T ss_pred CCCCCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------c
Confidence 33344 45444332 357999999999865 46899999999999986 8997 788775 5
Q ss_pred cccCCCCCCCccchhHHHHHHHHHHhhCCCCCCHHHHHHHhhhhhhhhcCCcceeeecCcCCCCcccc------------
Q 020951 89 EKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGRRDSTTASR------------ 156 (319)
Q Consensus 89 E~~~~~N~~~~~g~~~id~iK~~le~~cp~~VScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~~------------ 156 (319)
|++++.|.++.+++.+++.||+++. ..||+||+|+||+..|||.+|||.|++..||.|...+..
T Consensus 115 e~~w~~N~gL~ka~~~L~pik~ky~----~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~ 190 (726)
T PRK15061 115 LNSWPDNVNLDKARRLLWPIKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLG 190 (726)
T ss_pred cccchhhhhHHHHHHHHHHHHHHhC----CCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccc
Confidence 9999999977789999999998864 579999999999999999999999999999999875432
Q ss_pred ---------------------------ccccCCCCCCCCCHHHHHHHHHHCCCChhhhHhhc-cCccccccccccccccc
Q 020951 157 ---------------------------AAANTSIPPPTSNLSALISSFSAQGLSLKNMVALA-GGHTVGKARCTSFRGHI 208 (319)
Q Consensus 157 ---------------------------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~-GaHtiG~~hc~~f~~Rl 208 (319)
++ +..+|+|..++.+|++.|.+||||++|||||+ ||||||++||..|.+|+
T Consensus 191 ~~~r~~~~~~l~~pl~a~~mgliyvnpeg-p~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl 269 (726)
T PRK15061 191 GDERYSGERDLENPLAAVQMGLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV 269 (726)
T ss_pred cccccccccccccchhhhhccceecCCCC-CCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc
Confidence 11 12489999999999999999999999999996 99999999999999999
Q ss_pred cCCCCCCHHHHHHH--hccCCCCCC-CCcccCCC---CCCCcccCcHHHHHHhhc-------------------------
Q 020951 209 YNDSNIDTSFARSL--QQRCPRRGN-DNVLANLD---RQTPTCFDNLYYKNLLNK------------------------- 257 (319)
Q Consensus 209 ~~dp~~d~~~~~~L--~~~Cp~~~~-~~~~~~~D---~~tp~~FDn~Yy~~l~~~------------------------- 257 (319)
..||++++.+++.| ++.||.+.+ +..+..+| +.||.+|||+||++|+..
T Consensus 270 gpdP~~a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~ 349 (726)
T PRK15061 270 GPEPEAAPIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTV 349 (726)
T ss_pred CCCCCcCHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccC
Confidence 88999999999998 489996433 22234566 579999999999999984
Q ss_pred -----------ccccccchhcccCcchHHHHHHHhhCHHHHHHHHHHHHHHh--hcCCCCCCC
Q 020951 258 -----------KGLLHSDQELFNGNSADFLVKRYAASISVFFKDFARGMIKM--GNIKPLTGS 307 (319)
Q Consensus 258 -----------~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~ 307 (319)
.+||+||++|..|++++++|++||.|+++|+++|++||.|| ..+|+++-.
T Consensus 350 pd~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry 412 (726)
T PRK15061 350 PDAHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRY 412 (726)
T ss_pred CcccccccccCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhh
Confidence 58999999999999999999999999999999999999999 457776543
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=4.8e-51 Score=376.55 Aligned_cols=214 Identities=28% Similarity=0.340 Sum_probs=177.5
Q ss_pred HHHHHhccchhhhHHHHhhhccc-------ccCCCceeeccCCCCCccccc-CCCCCCCccchhHHHHHHHHHHhhCCCC
Q 020951 48 IAAIKNETRVGASLLRLHFHDCF-------VNGCDGSVLLDDTANFIGEKT-AVPNNNSARGFNVVDQIKANLEKACPRV 119 (319)
Q Consensus 48 ~~~~~~~~~~aa~llRl~FHDc~-------v~GcDgSill~~~~~~~~E~~-~~~N~~~~~g~~~id~iK~~le~~cp~~ 119 (319)
......+++++|+||||+||||| ++||||||+++.. .+|+. .+.|. ++++|+.|+.+ +
T Consensus 32 ~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~-~l~~~~~i~~~----------~ 97 (264)
T cd08201 32 DCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNT-TLNFFVNFYSP----------R 97 (264)
T ss_pred ccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhh-ccccceeeccC----------c
Confidence 34455789999999999999999 8999999999742 35777 44454 67888877544 6
Q ss_pred CCHHHHHHHhhhhhhhhcCCcceeeecCcCCCCccccccccCCCCCCCCCHHHHHHHHHHCCCChhhhHhhcc-Cccccc
Q 020951 120 VSCADILAIAARDSVVVFGGPSWKVRLGRRDSTTASRAAANTSIPPPTSNLSALISSFSAQGLSLKNMVALAG-GHTVGK 198 (319)
Q Consensus 120 VScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~G-aHtiG~ 198 (319)
||||||||||||+||+.+|||.|+|++||+|++++.+. .||.|+.++++|++.|+++||+++|||+|+| |||||+
T Consensus 98 VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~ 173 (264)
T cd08201 98 SSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLGG 173 (264)
T ss_pred cCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeeee
Confidence 99999999999999999999999999999999988753 4999999999999999999999999999995 999999
Q ss_pred cccccccccccCCCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHHHHhhccc----------ccccchhcc
Q 020951 199 ARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLLNKKG----------LLHSDQELF 268 (319)
Q Consensus 199 ~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~g----------ll~SD~~L~ 268 (319)
+||..|.+++. |.. ......+|| .||.+|||+||.+++.+.. .+.||..++
T Consensus 174 ahc~~f~~~~~--~g~----------------~~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd~r~f 234 (264)
T cd08201 174 VHSEDFPEIVP--PGS----------------VPDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSDLRIF 234 (264)
T ss_pred cccccchhhcC--Ccc----------------ccCCCCCCC-CCccccchHHHHHHhcCCCCCceeecCCCCccchhhhe
Confidence 99999887752 100 000235788 7999999999999998642 468999998
Q ss_pred cCcchHHHHHHHhhCHHHHHHHHHHHHHHhhc
Q 020951 269 NGNSADFLVKRYAASISVFFKDFARGMIKMGN 300 (319)
Q Consensus 269 ~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 300 (319)
+...- ..++..| +++.|.+.++..++||.+
T Consensus 235 ~~d~n-~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 235 SSDGN-VTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred ecCcc-HHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 75443 3566667 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=2.8e-40 Score=308.52 Aligned_cols=221 Identities=20% Similarity=0.257 Sum_probs=181.8
Q ss_pred HHHHHHHHhccchhhhHHHHhhhcccc-------cCCCce-eeccCCCCCcccccCCCCCC--CccchhHHHHHHHHHHh
Q 020951 45 AGIIAAIKNETRVGASLLRLHFHDCFV-------NGCDGS-VLLDDTANFIGEKTAVPNNN--SARGFNVVDQIKANLEK 114 (319)
Q Consensus 45 ~~v~~~~~~~~~~aa~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~--~~~g~~~id~iK~~le~ 114 (319)
+.+++.+....-.++.||||+||++.+ ||++|+ |.|. +|++++.|.+ +.+.+.+++.||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~------pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA------PQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc------cccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 577788888888899999999999985 899999 7665 5999999997 66788999999998853
Q ss_pred h-CC-CCCCHHHHHHHhhhhhhhhcCC-----cceeeecCcCCCCccccccc--cCCCCCCC------------CCHHHH
Q 020951 115 A-CP-RVVSCADILAIAARDSVVVFGG-----PSWKVRLGRRDSTTASRAAA--NTSIPPPT------------SNLSAL 173 (319)
Q Consensus 115 ~-cp-~~VScADiialaar~Av~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 173 (319)
. -+ ..||+||+|+||+..|||.+|| |.|++.+||.|.+.+..... ...+|.+. ...+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 2 22 2799999999999999999999 99999999999987643211 11345332 235789
Q ss_pred HHHHHHCCCChhhhHhhccCc-cccccccccccccccCCCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHH
Q 020951 174 ISSFSAQGLSLKNMVALAGGH-TVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYK 252 (319)
Q Consensus 174 ~~~F~~~Gl~~~e~VaL~GaH-tiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~ 252 (319)
++.|.++|||++|||||+||| ++|..|..++ ..+|. .+|.+|||.||+
T Consensus 171 rd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s~------------------------------~G~wT-~~p~~f~N~fF~ 219 (297)
T cd08200 171 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK------------------------------HGVFT-DRPGVLTNDFFV 219 (297)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCCC------------------------------CCCCc-CCCCccccHHHH
Confidence 999999999999999999998 7998884321 12453 689999999999
Q ss_pred HHhhcc--------------------c-----ccccchhcccCcchHHHHHHHhhC--HHHHHHHHHHHHHHhhcCC
Q 020951 253 NLLNKK--------------------G-----LLHSDQELFNGNSADFLVKRYAAS--ISVFFKDFARGMIKMGNIK 302 (319)
Q Consensus 253 ~l~~~~--------------------g-----ll~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lg 302 (319)
||++.. | .+.+|.+|.+|++.|++|+.||.| ++.||+||++||.||+++.
T Consensus 220 nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 220 NLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred HHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 999521 1 267899999999999999999998 9999999999999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=6.5e-35 Score=298.91 Aligned_cols=221 Identities=22% Similarity=0.259 Sum_probs=177.0
Q ss_pred HHHHHHHHH---HHhccchhhhHHHHhhhcccc-------cCCCce-eeccCCCCCcccccCCCC--CCCccchhHHHHH
Q 020951 42 IVRAGIIAA---IKNETRVGASLLRLHFHDCFV-------NGCDGS-VLLDDTANFIGEKTAVPN--NNSARGFNVVDQI 108 (319)
Q Consensus 42 iV~~~v~~~---~~~~~~~aa~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N--~~~~~g~~~id~i 108 (319)
+|+++|.+. +....-..+.|||++||++.+ ||++|+ |.|. +|++++.| .++.+.+.+++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHH
Confidence 345555553 455566789999999999985 899998 8775 59999999 6566788899999
Q ss_pred HHHHHhhCCCCCCHHHHHHHhhhhhhhhc---CCc--ceeeecCcCCCCccccccccCCCC-----CC----------CC
Q 020951 109 KANLEKACPRVVSCADILAIAARDSVVVF---GGP--SWKVRLGRRDSTTASRAAANTSIP-----PP----------TS 168 (319)
Q Consensus 109 K~~le~~cp~~VScADiialaar~Av~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP-----~p----------~~ 168 (319)
|+++.. +.||.||+|+||+..|||.+ ||| .+++.+||.|.+.... +++...| +. ..
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCC
Confidence 988752 27999999999999999998 998 5899999999987643 2222222 11 12
Q ss_pred CHHHHHHHHHHCCCChhhhHhhccC-ccccccccccccccccCCCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccC
Q 020951 169 NLSALISSFSAQGLSLKNMVALAGG-HTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFD 247 (319)
Q Consensus 169 ~~~~l~~~F~~~Gl~~~e~VaL~Ga-HtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FD 247 (319)
..+.|++.|.++|||++|||||+|| |++|+.|..++ ..+|. .+|.+||
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~------------------------------~G~~T-~~p~~f~ 627 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSK------------------------------HGVFT-DRVGVLS 627 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCCCC------------------------------CCCCc-CCCCccc
Confidence 3566899999999999999999998 59999995321 12443 5899999
Q ss_pred cHHHHHHhhcc--------------------c---cc--ccchhcccCcchHHHHHHHhhCH--HHHHHHHHHHHHHhhc
Q 020951 248 NLYYKNLLNKK--------------------G---LL--HSDQELFNGNSADFLVKRYAASI--SVFFKDFARGMIKMGN 300 (319)
Q Consensus 248 n~Yy~~l~~~~--------------------g---ll--~SD~~L~~d~~t~~~V~~yA~d~--~~F~~~Fa~Am~Km~~ 300 (319)
|.||+||++.. | ++ .+|.+|.+|++.|++|+.||+|+ +.|++||++||.|+.+
T Consensus 628 NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~Klm~ 707 (716)
T TIGR00198 628 NDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWTKVMN 707 (716)
T ss_pred cHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHHHHHh
Confidence 99999999721 1 22 67999999999999999999997 8999999999999999
Q ss_pred CCC
Q 020951 301 IKP 303 (319)
Q Consensus 301 lgv 303 (319)
++-
T Consensus 708 ldr 710 (716)
T TIGR00198 708 LDR 710 (716)
T ss_pred CCC
Confidence 874
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.9e-34 Score=294.01 Aligned_cols=222 Identities=22% Similarity=0.276 Sum_probs=181.8
Q ss_pred HHHHHHHHhccchhhhHHHHhhhcccc-------cCCCce-eeccCCCCCcccccCCCCC--CCccchhHHHHHHHHHHh
Q 020951 45 AGIIAAIKNETRVGASLLRLHFHDCFV-------NGCDGS-VLLDDTANFIGEKTAVPNN--NSARGFNVVDQIKANLEK 114 (319)
Q Consensus 45 ~~v~~~~~~~~~~aa~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~--~~~~g~~~id~iK~~le~ 114 (319)
..+++.+....-..+.|||++||++.+ ||++|+ |.|. +|++++.|. ++.+.+.+++.||++++.
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 567777777777899999999999985 899998 8876 499999998 566788999999999864
Q ss_pred hC--CCCCCHHHHHHHhhhhhhhhc---CC--cceeeecCcCCCCccccccc--cCCCCCCC------------CCHHHH
Q 020951 115 AC--PRVVSCADILAIAARDSVVVF---GG--PSWKVRLGRRDSTTASRAAA--NTSIPPPT------------SNLSAL 173 (319)
Q Consensus 115 ~c--p~~VScADiialaar~Av~~~---GG--P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 173 (319)
.- ...||.||+|+||+..|||.+ || |.+++..||.|.+....... ...+|.+. ...+.|
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L 595 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELL 595 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHH
Confidence 32 237999999999999999998 68 99999999999987543211 12456543 234789
Q ss_pred HHHHHHCCCChhhhHhhccCc-cccccccccccccccCCCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHH
Q 020951 174 ISSFSAQGLSLKNMVALAGGH-TVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYK 252 (319)
Q Consensus 174 ~~~F~~~Gl~~~e~VaL~GaH-tiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~ 252 (319)
++.|.++|||++|||||+||| ++|..|-.++ ..+|. .+|.+|||.||+
T Consensus 596 ~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S~------------------------------~G~~T-~~p~~fsNdfFv 644 (726)
T PRK15061 596 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK------------------------------HGVFT-DRPGVLTNDFFV 644 (726)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCCC------------------------------CCCCc-CCCCccccHHHH
Confidence 999999999999999999997 7888884321 12342 589999999999
Q ss_pred HHhhcc--------------------c---c--cccchhcccCcchHHHHHHHhhC--HHHHHHHHHHHHHHhhcCCC
Q 020951 253 NLLNKK--------------------G---L--LHSDQELFNGNSADFLVKRYAAS--ISVFFKDFARGMIKMGNIKP 303 (319)
Q Consensus 253 ~l~~~~--------------------g---l--l~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lgv 303 (319)
||++.. | + +.+|.+|.+|++.|++|+.||.| ++.|++||++||.|+++++-
T Consensus 645 nLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeldr 722 (726)
T PRK15061 645 NLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLDR 722 (726)
T ss_pred HHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCCC
Confidence 999521 1 1 47899999999999999999999 99999999999999999874
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.98 E-value=3.6e-32 Score=266.23 Aligned_cols=250 Identities=20% Similarity=0.295 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHhc--------cchhhhHHHHhhhcccc-------cCCCceeeccCCCCCcccccCCCCCCCccchhHHH
Q 020951 42 IVRAGIIAAIKNE--------TRVGASLLRLHFHDCFV-------NGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVD 106 (319)
Q Consensus 42 iV~~~v~~~~~~~--------~~~aa~llRl~FHDc~v-------~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~id 106 (319)
.|++.++..+... ....|-+|||+||-+.+ ||..+. ..++.++.++|.|.++.+++.+++
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G-----~qRFaPlnSWPDN~nLDKarRLLW 145 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGG-----QQRFAPLNSWPDNANLDKARRLLW 145 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCC-----ceecccccCCCcccchHHHHHHhh
Confidence 5667777777755 24789999999999986 454442 235667899999998889999999
Q ss_pred HHHHHHHhhCCCCCCHHHHHHHhhhhhhhhcCCcceeeecCcCCCCcccc------------------------------
Q 020951 107 QIKANLEKACPRVVSCADILAIAARDSVVVFGGPSWKVRLGRRDSTTASR------------------------------ 156 (319)
Q Consensus 107 ~iK~~le~~cp~~VScADiialaar~Av~~~GGP~~~v~~GR~D~~~s~~------------------------------ 156 (319)
.||+++. ..||+||+|.|++..|++.+|++.+.+..||.|-..+..
T Consensus 146 PIKkKYG----~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaavq 221 (730)
T COG0376 146 PIKKKYG----RKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQ 221 (730)
T ss_pred hHhHhhc----ccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhhe
Confidence 9998864 599999999999999999999999999999999888765
Q ss_pred --------ccccCCCCCCCCCHHHHHHHHHHCCCChhhhHhhc-cCccccccccccccccccCCCCCCHHHHHHH--hcc
Q 020951 157 --------AAANTSIPPPTSNLSALISSFSAQGLSLKNMVALA-GGHTVGKARCTSFRGHIYNDSNIDTSFARSL--QQR 225 (319)
Q Consensus 157 --------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~e~VaL~-GaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L--~~~ 225 (319)
++ ++..|+|..+..+++..|++|+++++|.|||+ ||||+|++|...=.+.+..+|.--+--.+.| ...
T Consensus 222 MGLIYVNPEG-png~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGlGW~~~ 300 (730)
T COG0376 222 MGLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGLGWANT 300 (730)
T ss_pred eeeEEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhcCCCccccchhhhccccccc
Confidence 23 34689999999999999999999999999999 7999999998764444444665433222323 445
Q ss_pred CCCCCCCCc-----ccCCCCCCCcccCcHHHHHHhhcc-----------------------------------cccccch
Q 020951 226 CPRRGNDNV-----LANLDRQTPTCFDNLYYKNLLNKK-----------------------------------GLLHSDQ 265 (319)
Q Consensus 226 Cp~~~~~~~-----~~~~D~~tp~~FDn~Yy~~l~~~~-----------------------------------gll~SD~ 265 (319)
|..+.+..+ -++|. .||++|||+||.+|+... .||.+|.
T Consensus 301 ~g~G~G~dtitsGlE~~Wt-~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDl 379 (730)
T COG0376 301 YGSGKGPDTITSGLEGAWT-TTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDL 379 (730)
T ss_pred cCCCcCcccccccccccCC-CCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccch
Confidence 543322211 24564 699999999999999621 3899999
Q ss_pred hcccCcchHHHHHHHhhCHHHHHHHHHHHHHHhhcCC
Q 020951 266 ELFNGNSADFLVKRYAASISVFFKDFARGMIKMGNIK 302 (319)
Q Consensus 266 ~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 302 (319)
+|.-||..++|.++|..|++.|.+.|++||.||.+-.
T Consensus 380 aLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 380 ALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred hhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999997643
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.56 E-value=2.2e-14 Score=141.79 Aligned_cols=217 Identities=22% Similarity=0.282 Sum_probs=158.0
Q ss_pred HHHHHHHHhccchhhhHHHHhhhcccc-------cCCCce-eeccCCCCCcccccCCCCCC--CccchhHHHHHHHHHHh
Q 020951 45 AGIIAAIKNETRVGASLLRLHFHDCFV-------NGCDGS-VLLDDTANFIGEKTAVPNNN--SARGFNVVDQIKANLEK 114 (319)
Q Consensus 45 ~~v~~~~~~~~~~aa~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~--~~~g~~~id~iK~~le~ 114 (319)
..++..+....-....|+-.+|-.+-+ ||.+|. |.|. +.++++-|.. +.+-+.+++.|++..+
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 356777777777788999999998865 788885 7776 4789988864 2356788888888877
Q ss_pred hCCCCCCHHHHHHHhhhhhhhhc---CCcc--eeeecCcCCCCccccccccC-CC-CC--C----------CCCHHHHHH
Q 020951 115 ACPRVVSCADILAIAARDSVVVF---GGPS--WKVRLGRRDSTTASRAAANT-SI-PP--P----------TSNLSALIS 175 (319)
Q Consensus 115 ~cp~~VScADiialaar~Av~~~---GGP~--~~v~~GR~D~~~s~~~~~~~-~l-P~--p----------~~~~~~l~~ 175 (319)
..||.||+|+|++..||+.+ +|-. +|+..||.|+........-- .| |- . ....+-|++
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvD 601 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVD 601 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHH
Confidence 48999999999999999874 6765 56679999997654321100 01 11 1 122344788
Q ss_pred HHHHCCCChhhhHhhccCc-cccccccccccccccCCCCCCHHHHHHHhccCCCCCCCCcccCCCCCCCcccCcHHHHHH
Q 020951 176 SFSAQGLSLKNMVALAGGH-TVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 254 (319)
Q Consensus 176 ~F~~~Gl~~~e~VaL~GaH-tiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~~l 254 (319)
+-+-.+||..||++|+||- -+|..+..+ ....| ...|..+.|.||.||
T Consensus 602 kAqlL~LtapemtVLiGGlRvLg~n~g~s------------------------------~~GVf-T~~pg~LtndFFvnL 650 (730)
T COG0376 602 KAQLLTLTAPEMTVLIGGLRVLGANYGGS------------------------------KHGVF-TDRPGVLTNDFFVNL 650 (730)
T ss_pred HHHHhccCCccceEEEcceEeeccCCCCC------------------------------cccee-ccCcccccchhhhhh
Confidence 8888999999999999875 344433211 01122 135778888888888
Q ss_pred hhc----------c----------cc-----cccchhcccCcchHHHHHHHhhC--HHHHHHHHHHHHHHhhcCC
Q 020951 255 LNK----------K----------GL-----LHSDQELFNGNSADFLVKRYAAS--ISVFFKDFARGMIKMGNIK 302 (319)
Q Consensus 255 ~~~----------~----------gl-----l~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lg 302 (319)
++- + |- -..|..+-+++..|.+.+.||.| ++.|.+||+.||.|..++.
T Consensus 651 lDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 651 LDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred hhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 862 1 21 25788888899999999999986 7999999999999998875
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=72.59 E-value=35 Score=33.35 Aligned_cols=131 Identities=11% Similarity=0.106 Sum_probs=66.9
Q ss_pred cCCcceeeecCcCCCCccccccccCCCCCC---CCCHHHHHHHHHHCCC----------ChhhhHhhccCcccccccccc
Q 020951 137 FGGPSWKVRLGRRDSTTASRAAANTSIPPP---TSNLSALISSFSAQGL----------SLKNMVALAGGHTVGKARCTS 203 (319)
Q Consensus 137 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p---~~~~~~l~~~F~~~Gl----------~~~e~VaL~GaHtiG~~hc~~ 203 (319)
+|-..+..+.||.+.+.-.+.......+.. -..+.++...|++.|+ +.+|+..|.|+|.+
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qi~~laG~D~l------- 252 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNTGEILELAGCDKL------- 252 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeEEEecccCCHHHHHHHHCCCEE-------
Confidence 577889999999966532221111111211 2357778888888886 45677777777743
Q ss_pred ccccccCCCCCCHHHHHHHhccC-CCCC--CCCcccCCCCCCCcccCcHHHHHHhhcccccccchhcccCcchHHHHHHH
Q 020951 204 FRGHIYNDSNIDTSFARSLQQRC-PRRG--NDNVLANLDRQTPTCFDNLYYKNLLNKKGLLHSDQELFNGNSADFLVKRY 280 (319)
Q Consensus 204 f~~Rl~~dp~~d~~~~~~L~~~C-p~~~--~~~~~~~~D~~tp~~FDn~Yy~~l~~~~gll~SD~~L~~d~~t~~~V~~y 280 (319)
++.|...++|...- ..-. -+.....-....+..+|...|+-.++..++ .-.....-++.|
T Consensus 253 ---------Ti~p~ll~~L~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~fr~~~~~d~m--------a~ekl~~gir~F 315 (333)
T PTZ00411 253 ---------TISPKLLEELANTEDGPVERKLDPEKLTEDTEKLPELTEKEFRWELNEDAM--------ATEKLAEGIRNF 315 (333)
T ss_pred ---------eCCHHHHHHHHhCCCcccCcccCcccccccccccCCCCHHHHHHHhCCCcc--------hHHHHHHHHHHH
Confidence 34556666664421 1000 000001111112345677777643322221 112344567777
Q ss_pred hhCHHHHHHHH
Q 020951 281 AASISVFFKDF 291 (319)
Q Consensus 281 A~d~~~F~~~F 291 (319)
+.|+....+-.
T Consensus 316 ~~d~~~Le~~i 326 (333)
T PTZ00411 316 AKDLEKLENVI 326 (333)
T ss_pred HHHHHHHHHHH
Confidence 77776554433
No 20
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.07 E-value=15 Score=27.81 Aligned_cols=29 Identities=14% Similarity=0.307 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhccchhhhHHHHhhhccc
Q 020951 42 IVRAGIIAAIKNETRVGASLLRLHFHDCF 70 (319)
Q Consensus 42 iV~~~v~~~~~~~~~~aa~llRl~FHDc~ 70 (319)
|.|+.+++.++++|.+-...||+.+--.+
T Consensus 24 iark~~~k~lk~NPpine~~iR~M~~qmG 52 (71)
T COG3763 24 IARKQMKKQLKDNPPINEEMIRMMMAQMG 52 (71)
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHhC
Confidence 88999999999999999999999987664
No 21
>PRK05269 transaldolase B; Provisional
Probab=55.65 E-value=84 Score=30.51 Aligned_cols=128 Identities=11% Similarity=0.107 Sum_probs=64.7
Q ss_pred hcCCcceeeecCcCCCCccccccccCC---CCCCCCCHHHHHHHHHHCCCCh----------hhhHhhccCccccccccc
Q 020951 136 VFGGPSWKVRLGRRDSTTASRAAANTS---IPPPTSNLSALISSFSAQGLSL----------KNMVALAGGHTVGKARCT 202 (319)
Q Consensus 136 ~~GGP~~~v~~GR~D~~~s~~~~~~~~---lP~p~~~~~~l~~~F~~~Gl~~----------~e~VaL~GaHtiG~~hc~ 202 (319)
.+|-..+..+.||.|.+.-...+.... --++-..+.++...|++.|+.. .++..|.|+|++
T Consensus 169 ~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~t~im~ASfrn~~~v~~laG~d~v------ 242 (318)
T PRK05269 169 EAGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYYKKHGYKTVVMGASFRNTGQILELAGCDRL------ 242 (318)
T ss_pred HcCCCEEEeeccHHHHHhhhcccccccCcCCCcHHHHHHHHHHHHHHcCCCceEEeeccCCHHHHHHHhCCCeE------
Confidence 357788999999998652211110000 1113345788888999988754 444555555533
Q ss_pred cccccccCCCCCCHHHHHHHhccC-CCC-CCCCcccCCCCCCCcccCcHHHHHHhhcccccccchhcccCcchHHHHHHH
Q 020951 203 SFRGHIYNDSNIDTSFARSLQQRC-PRR-GNDNVLANLDRQTPTCFDNLYYKNLLNKKGLLHSDQELFNGNSADFLVKRY 280 (319)
Q Consensus 203 ~f~~Rl~~dp~~d~~~~~~L~~~C-p~~-~~~~~~~~~D~~tp~~FDn~Yy~~l~~~~gll~SD~~L~~d~~t~~~V~~y 280 (319)
++.|...++|...- |-. .-+.. .+- ...+..+|-..|+..++..+ ........-++.|
T Consensus 243 ----------Ti~p~ll~~l~~~~~~~~~~l~~~-~~~-~~~~~~~~e~~f~~~~~~d~--------ma~ekl~egi~~F 302 (318)
T PRK05269 243 ----------TISPALLEELAASEGELERKLSPP-GEA-KARPVPLTEAEFRWQHNEDA--------MATEKLAEGIRKF 302 (318)
T ss_pred ----------ECCHHHHHHHHhcCCCccccCCCc-ccc-ccccccCCHHHHHHHhCccc--------chHHHHHHHHHHH
Confidence 35666667765421 100 00000 000 11245567777765433322 1122345566666
Q ss_pred hhCHHHHHH
Q 020951 281 AASISVFFK 289 (319)
Q Consensus 281 A~d~~~F~~ 289 (319)
+.++..-.+
T Consensus 303 ~~~~~~L~~ 311 (318)
T PRK05269 303 AKDQEKLEK 311 (318)
T ss_pred HHHHHHHHH
Confidence 666654443
No 22
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=55.02 E-value=10 Score=30.23 Aligned_cols=19 Identities=26% Similarity=0.413 Sum_probs=9.2
Q ss_pred CCchhHHHHHHHHHHHHHh
Q 020951 1 MAATSYYFLLLILTFVTAT 19 (319)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~ 19 (319)
|++-+..||.|++++++++
T Consensus 1 MaSK~~llL~l~LA~lLli 19 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLI 19 (95)
T ss_pred CchhHHHHHHHHHHHHHHH
Confidence 7766544444444343333
No 23
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=54.71 E-value=1.5e+02 Score=29.75 Aligned_cols=88 Identities=15% Similarity=0.246 Sum_probs=50.3
Q ss_pred CCHHHHHHHhhhhhhh--hcCCcceeeecCcCCCCccccccccCCCCCCC----CCHHHHHHHHHHCCCC----------
Q 020951 120 VSCADILAIAARDSVV--VFGGPSWKVRLGRRDSTTASRAAANTSIPPPT----SNLSALISSFSAQGLS---------- 183 (319)
Q Consensus 120 VScADiialaar~Av~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~----~~~~~l~~~F~~~Gl~---------- 183 (319)
|.|-=.+.+....|+. .+|-..+..+.||.|.+.-...+. ..+|... ..+.++...|++.|+.
T Consensus 155 I~~n~TlvFS~~QA~aaaeAGa~~ISPfVgRi~dw~~~~~g~-~~~~~~~dpGv~~v~~i~~~~~~~~~~T~Im~ASfRn 233 (391)
T PRK12309 155 IHCNLTLLFGFHQAIACAEAGVTLISPFVGRILDWYKKETGR-DSYPGAEDPGVQSVTQIYNYYKKFGYKTEVMGASFRN 233 (391)
T ss_pred CceeeeeecCHHHHHHHHHcCCCEEEeecchhhhhhhhccCC-CccccccchHHHHHHHHHHHHHhcCCCcEEEecccCC
Confidence 4443333444443332 358888999999998754322111 1234322 2477788888888763
Q ss_pred hhhhHhhccCccccccccccccccccCCCCCCHHHHHHHhc
Q 020951 184 LKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQ 224 (319)
Q Consensus 184 ~~e~VaL~GaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~ 224 (319)
..++..|.|+|.+ ++.|...++|..
T Consensus 234 ~~~v~~laG~d~~----------------Ti~p~ll~~L~~ 258 (391)
T PRK12309 234 IGEIIELAGCDLL----------------TISPKLLEQLRS 258 (391)
T ss_pred HHHHHHHHCCCee----------------eCCHHHHHHHHh
Confidence 4556666666532 356666666654
No 24
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=53.08 E-value=1.3e+02 Score=29.14 Aligned_cols=129 Identities=15% Similarity=0.197 Sum_probs=66.4
Q ss_pred hcCCcceeeecCcCCCCccccccccC---CCCCCCCCHHHHHHHHHHCCCC----------hhhhHhhccCccccccccc
Q 020951 136 VFGGPSWKVRLGRRDSTTASRAAANT---SIPPPTSNLSALISSFSAQGLS----------LKNMVALAGGHTVGKARCT 202 (319)
Q Consensus 136 ~~GGP~~~v~~GR~D~~~s~~~~~~~---~lP~p~~~~~~l~~~F~~~Gl~----------~~e~VaL~GaHtiG~~hc~ 202 (319)
.+|-..+..+.||.|-+.-...+... ..-++-..+.++...|++.|+. .+|+.+|.|+|.+
T Consensus 167 ~AGa~~ISPFVgRi~dw~~~~~g~~~~~~~~d~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qv~~laG~d~~------ 240 (317)
T TIGR00874 167 EAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASFRNKEEILALAGCDRL------ 240 (317)
T ss_pred HcCCCEEEeecchHhHhhhhccCccccccccCchHHHHHHHHHHHHHcCCCcEEEeeccCCHHHHHHHHCCCeE------
Confidence 45888899999999764222111000 0112334677788899888864 4556666666532
Q ss_pred cccccccCCCCCCHHHHHHHhccCCCCCC--CC-cccCCCCCCCcccCcHHHHHHhhcccccccchhcccCcchHHHHHH
Q 020951 203 SFRGHIYNDSNIDTSFARSLQQRCPRRGN--DN-VLANLDRQTPTCFDNLYYKNLLNKKGLLHSDQELFNGNSADFLVKR 279 (319)
Q Consensus 203 ~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~--~~-~~~~~D~~tp~~FDn~Yy~~l~~~~gll~SD~~L~~d~~t~~~V~~ 279 (319)
++.|...++|...-..-.. +. .....+ ..|..+|...|+-.++..++ .-.....-++.
T Consensus 241 ----------Ti~p~ll~~L~~~~~~~~~~l~~~~~~~~~-~~~~~~~e~~fr~~~~~d~m--------a~ekl~~gir~ 301 (317)
T TIGR00874 241 ----------TISPALLDELKESTGPVERKLDPESAKKVD-KQPIILDESEFRFLHNEDAM--------ATEKLAEGIRK 301 (317)
T ss_pred ----------eCCHHHHHHHHhCCCCcCccCCcccccccc-ccCCCCCHHHHHHHhCCCcc--------hHHHHHHHHHH
Confidence 3566666666542110000 00 000011 23456788888644333221 11224556677
Q ss_pred HhhCHHHHHH
Q 020951 280 YAASISVFFK 289 (319)
Q Consensus 280 yA~d~~~F~~ 289 (319)
|+.|+....+
T Consensus 302 F~~d~~~Le~ 311 (317)
T TIGR00874 302 FAADQEKLEK 311 (317)
T ss_pred HHHHHHHHHH
Confidence 7777655443
No 25
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=52.03 E-value=13 Score=28.84 Aligned_cols=18 Identities=17% Similarity=0.182 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhhcCCCC
Q 020951 287 FFKDFARGMIKMGNIKPL 304 (319)
Q Consensus 287 F~~~Fa~Am~Km~~lgv~ 304 (319)
...+|..||.||+.||.-
T Consensus 3 m~~~F~~am~KlavLG~d 20 (80)
T PF11895_consen 3 MQSAFKAAMAKLAVLGHD 20 (80)
T ss_dssp HHHHHHHHHHHHCTTTS-
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 568999999999999863
No 26
>PRK00523 hypothetical protein; Provisional
Probab=41.00 E-value=78 Score=24.07 Aligned_cols=29 Identities=7% Similarity=0.188 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhccchhhhHHHHhhhccc
Q 020951 42 IVRAGIIAAIKNETRVGASLLRLHFHDCF 70 (319)
Q Consensus 42 iV~~~v~~~~~~~~~~aa~llRl~FHDc~ 70 (319)
+-|+.+++.++++|.+-...||.-+--.+
T Consensus 25 iark~~~k~l~~NPpine~mir~M~~QMG 53 (72)
T PRK00523 25 VSKKMFKKQIRENPPITENMIRAMYMQMG 53 (72)
T ss_pred HHHHHHHHHHHHCcCCCHHHHHHHHHHhC
Confidence 67899999999999999999999887664
No 27
>PRK01844 hypothetical protein; Provisional
Probab=35.68 E-value=49 Score=25.15 Aligned_cols=29 Identities=10% Similarity=0.253 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhccchhhhHHHHhhhccc
Q 020951 42 IVRAGIIAAIKNETRVGASLLRLHFHDCF 70 (319)
Q Consensus 42 iV~~~v~~~~~~~~~~aa~llRl~FHDc~ 70 (319)
+-|+.+++.++++|.+-...||.-|--.+
T Consensus 24 ~ark~~~k~lk~NPpine~mir~Mm~QMG 52 (72)
T PRK01844 24 IARKYMMNYLQKNPPINEQMLKMMMMQMG 52 (72)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHhC
Confidence 67899999999999999999999887664
No 28
>PRK12346 transaldolase A; Provisional
Probab=31.60 E-value=45 Score=32.43 Aligned_cols=89 Identities=15% Similarity=0.169 Sum_probs=52.1
Q ss_pred CCCHHHHHHHhhhhhhh--hcCCcceeeecCcCCCCccccccccCCCCC----CCCCHHHHHHHHHHCCC----------
Q 020951 119 VVSCADILAIAARDSVV--VFGGPSWKVRLGRRDSTTASRAAANTSIPP----PTSNLSALISSFSAQGL---------- 182 (319)
Q Consensus 119 ~VScADiialaar~Av~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~----p~~~~~~l~~~F~~~Gl---------- 182 (319)
.|+|-=.+.|....|+. .+|-..+..+.||.|.+.-..... ..++. +-..+.++...|++.|+
T Consensus 149 GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~-~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~Vm~ASfR 227 (316)
T PRK12346 149 GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPM-DPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFR 227 (316)
T ss_pred CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhcccc-ccccccCCChHHHHHHHHHHHHHcCCCcEEEecccC
Confidence 44444444444444433 468888999999998753321111 11211 22457778888988885
Q ss_pred ChhhhHhhccCccccccccccccccccCCCCCCHHHHHHHhc
Q 020951 183 SLKNMVALAGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQ 224 (319)
Q Consensus 183 ~~~e~VaL~GaHtiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~ 224 (319)
+.+|+.+|.|+|.+ ++.|...++|..
T Consensus 228 n~~qi~alaG~d~l----------------Ti~p~ll~~L~~ 253 (316)
T PRK12346 228 RTEQILALAGCDRL----------------TISPNLLKELQE 253 (316)
T ss_pred CHHHHHHHhCCCEE----------------eCCHHHHHHHHh
Confidence 35667777777643 355666666654
No 29
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=29.92 E-value=30 Score=29.41 Aligned_cols=33 Identities=24% Similarity=0.505 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHHCCCChhhh-HhhccCccccccc
Q 020951 168 SNLSALISSFSAQGLSLKNM-VALAGGHTVGKAR 200 (319)
Q Consensus 168 ~~~~~l~~~F~~~Gl~~~e~-VaL~GaHtiG~~h 200 (319)
+++.+.+-.|+++||++.++ |.|--+|-||.++
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhh
Confidence 45666677899999999998 5555999999886
No 30
>PF15240 Pro-rich: Proline-rich
Probab=29.56 E-value=45 Score=29.78 Aligned_cols=25 Identities=12% Similarity=0.089 Sum_probs=11.0
Q ss_pred HHHHHHHHHHhhhccCcccCccccc
Q 020951 9 LLLILTFVTATLDQANSQLSTNYYK 33 (319)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~L~~~fY~ 33 (319)
|+||.+.|+||.++....-.+.+++
T Consensus 3 lVLLSvALLALSSAQ~~dEdv~~e~ 27 (179)
T PF15240_consen 3 LVLLSVALLALSSAQSTDEDVSQEE 27 (179)
T ss_pred hHHHHHHHHHhhhcccccccccccc
Confidence 4455455555554333223334444
No 31
>COG0167 PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism]
Probab=27.11 E-value=1.6e+02 Score=28.55 Aligned_cols=95 Identities=20% Similarity=0.319 Sum_probs=57.9
Q ss_pred cCCCceeeccCCC-CC--cccccCCC--CCC-Cc-------cchhHHHHHHHHHHhhCC-----CCCCHHHHHH--Hhhh
Q 020951 72 NGCDGSVLLDDTA-NF--IGEKTAVP--NNN-SA-------RGFNVVDQIKANLEKACP-----RVVSCADILA--IAAR 131 (319)
Q Consensus 72 ~GcDgSill~~~~-~~--~~E~~~~~--N~~-~~-------~g~~~id~iK~~le~~cp-----~~VScADiia--laar 131 (319)
.|.||=+++..+. +. ..+...+. |.. ++ +++++|.++.+.++..+| |.-|+-|.+- +|+.
T Consensus 185 ~g~Dgl~~~NT~~~~~~id~~~~~~~~~~~~GGLSG~~ikp~al~~v~~l~~~~~~~ipIIGvGGI~s~~DA~E~i~aGA 264 (310)
T COG0167 185 AGADGLIAINTTKSGMKIDLETKKPVLANETGGLSGPPLKPIALRVVAELYKRLGGDIPIIGVGGIETGEDALEFILAGA 264 (310)
T ss_pred cCCcEEEEEeeccccccccccccccccCcCCCCcCcccchHHHHHHHHHHHHhcCCCCcEEEecCcCcHHHHHHHHHcCC
Confidence 6999988887544 22 11221122 211 22 367888899999887776 6668888764 4666
Q ss_pred hhhhhc-----CCcceeeecCcCCCCccccccccCCCCCCCCCHHHHHHHHHHCCCC-hhhhHh
Q 020951 132 DSVVVF-----GGPSWKVRLGRRDSTTASRAAANTSIPPPTSNLSALISSFSAQGLS-LKNMVA 189 (319)
Q Consensus 132 ~Av~~~-----GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~-~~e~Va 189 (319)
.+|+.. .||.+- ..=.++|.++..++|+. .+|+|=
T Consensus 265 ~~vQv~Tal~~~Gp~i~-----------------------~~I~~~l~~~l~~~g~~si~d~iG 305 (310)
T COG0167 265 SAVQVGTALIYKGPGIV-----------------------KEIIKGLARWLEEKGFESIQDIIG 305 (310)
T ss_pred chheeeeeeeeeCchHH-----------------------HHHHHHHHHHHHHcCCCCHHHHhc
Confidence 666542 344330 11245677888899996 788763
No 32
>cd00439 Transaldolase Transaldolase. Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.
Probab=24.71 E-value=64 Score=30.15 Aligned_cols=49 Identities=6% Similarity=-0.134 Sum_probs=27.8
Q ss_pred hcCCcceeeecCcCCCCccccccccCCCCCCCC---CHHHHHHHHHHCCCCh
Q 020951 136 VFGGPSWKVRLGRRDSTTASRAAANTSIPPPTS---NLSALISSFSAQGLSL 184 (319)
Q Consensus 136 ~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~---~~~~l~~~F~~~Gl~~ 184 (319)
.+|...+..+.||.|...-......+.=|.... .+.++.+.|+..|...
T Consensus 158 ~Aga~~ispfvgRid~~~~~~~~~~~~d~~~~~gi~~~~~~~~~~~~~~~~t 209 (252)
T cd00439 158 DAGTSVASPFVSRIDTLMDKMLEQIGLDLRGKAGVAQVTLAYKLYKQKFKKQ 209 (252)
T ss_pred HcCCCEEEEeccHHHHHhhhhccccccccccCcHHHHHHHHHHHHHHhCCCC
Confidence 357778899999999765432221110011112 3446677777777644
No 33
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=22.49 E-value=60 Score=31.46 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=41.2
Q ss_pred CCCHHHHHHHhhhhhhh--hcCCcceeeecCcCCCCccccccccCCCCC----CCCCHHHHHHHHHHCCCCh--------
Q 020951 119 VVSCADILAIAARDSVV--VFGGPSWKVRLGRRDSTTASRAAANTSIPP----PTSNLSALISSFSAQGLSL-------- 184 (319)
Q Consensus 119 ~VScADiialaar~Av~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~----p~~~~~~l~~~F~~~Gl~~-------- 184 (319)
.|+|-=-+.|....|+. .+|-..+..+.||.|-+.-...+.. ..+. +-..+.++...|++.|+..
T Consensus 148 GI~vn~TlvFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~-~~~~~~d~Gv~~v~~i~~~~~~~~~~T~vmaASfR 226 (313)
T cd00957 148 GIHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYKKHSGDK-AYTAEEDPGVASVKKIYNYYKKFGYKTKVMGASFR 226 (313)
T ss_pred CCceeeeeecCHHHHHHHHHcCCCEEEeecchHHHhhhhccccc-cCCccCCcHHHHHHHHHHHHHHcCCCcEEEecccC
Confidence 34443333444443332 3477789999999986522211100 1111 2245777888998988753
Q ss_pred --hhhHhhccCc
Q 020951 185 --KNMVALAGGH 194 (319)
Q Consensus 185 --~e~VaL~GaH 194 (319)
+|+..|.|+|
T Consensus 227 n~~~v~~laG~d 238 (313)
T cd00957 227 NIGQILALAGCD 238 (313)
T ss_pred CHHHHHHHhCCC
Confidence 4555555555
No 34
>PLN00017 photosystem I reaction centre subunit VI; Provisional
Probab=21.39 E-value=54 Score=25.72 Aligned_cols=20 Identities=40% Similarity=0.597 Sum_probs=15.8
Q ss_pred HhhCHHHHHHHHHHHHHHhh
Q 020951 280 YAASISVFFKDFARGMIKMG 299 (319)
Q Consensus 280 yA~d~~~F~~~Fa~Am~Km~ 299 (319)
|-..|++||+.|+..+.|=+
T Consensus 38 Y~~~QskFFe~~A~~~tkR~ 57 (90)
T PLN00017 38 YNPLQSKFFETFAAPFTKRG 57 (90)
T ss_pred CChHHHHHHHHHhhhhhHHH
Confidence 45568999999999887743
No 35
>PF06163 DUF977: Bacterial protein of unknown function (DUF977); InterPro: IPR010382 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=20.38 E-value=1.3e+02 Score=25.33 Aligned_cols=23 Identities=22% Similarity=0.524 Sum_probs=17.2
Q ss_pred HHHHHHHHCC-CChhhhHhhccCc
Q 020951 172 ALISSFSAQG-LSLKNMVALAGGH 194 (319)
Q Consensus 172 ~l~~~F~~~G-l~~~e~VaL~GaH 194 (319)
++++.-+..| +|..||+++.|+|
T Consensus 16 rIvElVRe~GRiTi~ql~~~TGas 39 (127)
T PF06163_consen 16 RIVELVREHGRITIKQLVAKTGAS 39 (127)
T ss_pred HHHHHHHHcCCccHHHHHHHHCCC
Confidence 3556666666 6899999999875
Done!