Query 020953
Match_columns 319
No_of_seqs 227 out of 1467
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 10:36:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020953.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020953hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9y_A 1-aminocyclopropane-1-c 100.0 2.4E-85 8.3E-90 608.8 27.4 318 1-319 1-319 (319)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.2E-76 4E-81 549.7 26.5 283 1-291 4-307 (312)
3 1gp6_A Leucoanthocyanidin diox 100.0 9.7E-77 3.3E-81 559.0 25.5 291 3-297 46-349 (356)
4 1odm_A Isopenicillin N synthas 100.0 9.8E-73 3.4E-77 527.3 24.8 278 2-294 7-325 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 6.7E-73 2.3E-77 524.0 21.2 275 2-296 3-308 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 1.2E-66 4.1E-71 475.2 23.8 254 3-291 3-275 (280)
7 3dkq_A PKHD-type hydroxylase S 95.2 0.049 1.7E-06 47.6 7.6 79 156-253 100-194 (243)
8 2rg4_A Uncharacterized protein 92.5 1.2 4E-05 38.0 10.9 44 201-256 166-209 (216)
9 3itq_A Prolyl 4-hydroxylase, a 90.1 0.71 2.4E-05 39.4 7.0 86 157-254 113-212 (216)
10 2hbt_A EGL nine homolog 1; pro 88.3 0.79 2.7E-05 39.9 6.1 81 157-254 119-213 (247)
11 2jig_A Prolyl-4 hydroxylase; h 88.3 0.75 2.6E-05 39.2 5.9 88 157-255 100-218 (224)
12 3s57_A Alpha-ketoglutarate-dep 75.9 7.1 0.00024 32.7 7.0 79 157-251 102-200 (204)
13 3i3q_A Alpha-ketoglutarate-dep 71.9 4 0.00014 34.5 4.5 78 157-252 107-201 (211)
14 2iuw_A Alkylated repair protei 71.8 8.7 0.0003 33.0 6.7 80 157-252 128-228 (238)
15 3tht_A Alkylated DNA repair pr 64.1 8.2 0.00028 35.2 5.1 92 157-256 200-315 (345)
16 2opi_A L-fuculose-1-phosphate 51.5 6.9 0.00024 32.9 2.2 36 3-41 125-160 (212)
17 2dbn_A Hypothetical protein YB 49.4 7.7 0.00026 36.7 2.3 53 3-59 100-152 (461)
18 1m5a_B Insulin B chain; alpha 45.6 21 0.00071 20.2 2.8 18 18-35 9-26 (30)
19 1e4c_P L-fuculose 1-phosphate 44.0 9.6 0.00033 32.0 1.9 36 3-41 122-157 (215)
20 1pvt_A Sugar-phosphate aldolas 42.1 13 0.00044 31.7 2.5 36 3-41 161-196 (238)
21 2irp_A Putative aldolase class 41.4 12 0.00041 31.2 2.1 35 3-41 139-176 (208)
22 2da7_A Zinc finger homeobox pr 41.1 14 0.00049 25.4 2.0 41 108-148 14-54 (71)
23 2fk5_A Fuculose-1-phosphate al 40.5 13 0.00043 31.0 2.1 36 3-41 117-153 (200)
24 2v9l_A Rhamnulose-1-phosphate 37.8 13 0.00043 32.7 1.7 36 3-41 179-214 (274)
25 3o2g_A Gamma-butyrobetaine dio 36.5 18 0.0006 33.4 2.6 52 3-59 122-173 (388)
26 3ocr_A Class II aldolase/adduc 32.6 25 0.00085 30.8 2.8 38 2-41 155-192 (273)
27 1otj_A Alpha-ketoglutarate-dep 30.5 43 0.0015 28.9 4.0 47 4-56 18-64 (283)
28 1e5r_A Proline oxidase; oxidor 26.3 86 0.0029 27.7 5.1 63 174-252 104-175 (290)
29 2x4k_A 4-oxalocrotonate tautom 25.3 70 0.0024 20.0 3.5 24 120-143 18-41 (63)
30 2vf9_A Coat protein; virion, R 24.6 18 0.00062 26.1 0.3 24 211-238 43-66 (131)
31 1oih_A Putative alkylsulfatase 24.5 65 0.0022 28.1 4.1 49 4-58 28-77 (301)
32 3r1j_A Alpha-ketoglutarate-dep 22.8 82 0.0028 27.7 4.4 49 4-59 22-72 (301)
33 3abf_A 4-oxalocrotonate tautom 22.2 95 0.0033 19.6 3.7 23 121-143 17-39 (64)
34 2ww6_A Fibritin, T4 fibritin; 21.8 69 0.0024 17.4 2.2 15 193-207 10-24 (27)
35 1zav_A 50S ribosomal protein L 21.5 1.8E+02 0.0062 23.3 6.0 41 16-56 7-48 (180)
36 2j01_J 50S ribosomal protein L 21.0 1.8E+02 0.0063 23.1 5.8 39 16-54 5-45 (173)
No 1
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=2.4e-85 Score=608.77 Aligned_cols=318 Identities=82% Similarity=1.337 Sum_probs=275.0
Q ss_pred CCCCCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhhCCHHHHHHhhhcCCCccccccc
Q 020953 1 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTE 80 (319)
Q Consensus 1 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI~~~l~~~~~~~~~~fF~lp~e~K~~~~~~~~gy~~~~~~ 80 (319)
|++||||||+.+.+.++.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++....+||.++..+
T Consensus 1 m~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~~Gy~~~~~e 80 (319)
T 1w9y_A 1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAE 80 (319)
T ss_dssp -CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCccccc
Confidence 78899999998865568889999999999999999999999999999999999999999999999875545688877666
Q ss_pred ccCCCcccccccccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcCCCCCccceeec
Q 020953 81 VNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFHGANGPTFGTKVS 160 (319)
Q Consensus 81 ~~~~d~~e~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~ 160 (319)
.+..||+|.|++...|....|.||+.+|+||+.+++|+++|.+|+.+||++|+++||+++++|.+.+.+..++.+.+|++
T Consensus 81 ~~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~ 160 (319)
T 1w9y_A 81 VTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVS 160 (319)
T ss_dssp GGGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEE
T ss_pred CCCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEE
Confidence 67889999998876665567899999999999999999999999999999999999999999999886433355689999
Q ss_pred ccCCCCCCCCCCCcccccCCCceEEEEecCCCCeeEEeeCCcEEEcCCCCCcEEEehhhHHHHHhCCccccccceeecCC
Q 020953 161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQT 240 (319)
Q Consensus 161 ~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~g~W~~V~p~~~~~vVniGD~L~~~TnG~~~s~~HRV~~~~ 240 (319)
|||||++++...|+++|||+|+||||+||+.++||||+++|+|++|+|+||++||||||+||+||||+|||++|||++++
T Consensus 161 ~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~ 240 (319)
T 1w9y_A 161 NYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQK 240 (319)
T ss_dssp ECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCS
T ss_pred ecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCC
Confidence 99999998888999999999999999996569999999999999999999999999999999999999999999999988
Q ss_pred CCCCceeeEEeecCCCCceEecCccccccccc-cCCCCCCccHHHHHHHHhccccCCcchhhhhhhhhhhhhccCCCCCC
Q 020953 241 DGEGRMSLASFYNPGSDAVIYPAPALLEKEAE-KKQVYPKFVFEDYMKLYVPLKFQAKEPRFEAMKAVETNVNLGPIATA 319 (319)
Q Consensus 241 ~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~-~~~~y~~~~~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
..+ |||++||++|+.|++|.|+++|++++.. +|++|+++|++||++.++..++.++..+++.+|+.++....+||||+
T Consensus 241 ~~~-R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T 1w9y_A 241 DGA-RMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAMETDVKMDPIATV 319 (319)
T ss_dssp SSC-CEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC------------
T ss_pred CCC-ceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHHhhhcccCCcccC
Confidence 777 9999999999999999999999986411 37899999999999999999999887779999999999999999996
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.2e-76 Score=549.72 Aligned_cols=283 Identities=22% Similarity=0.339 Sum_probs=248.1
Q ss_pred CCCCCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhhCCHHHHHHhhh---cCCCcccc
Q 020953 1 MENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELV---ASRALEGI 77 (319)
Q Consensus 1 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI~~~l~~~~~~~~~~fF~lp~e~K~~~~~---~~~gy~~~ 77 (319)
|++||||||+.+.+ ++++++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++.. ..+||.+.
T Consensus 4 ~~~iPvIDls~~~~-~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 82 (312)
T 3oox_A 4 TSAIDPVSFSLYAK-DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPF 82 (312)
T ss_dssp CCSSCCEETHHHHH-CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECC
T ss_pred CCCCCeEEChHhcc-cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccc
Confidence 56899999998743 578899999999999999999999999999999999999999999999998643 34788765
Q ss_pred cccc----cCCCccccccccc-CCC-------CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHH
Q 020953 78 QTEV----NDMDWESTFYVRH-LPQ-------STINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKK 145 (319)
Q Consensus 78 ~~~~----~~~d~~e~~~~~~-~p~-------~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~ 145 (319)
+.+. ...||+|+|.+.. .+. ..+|.||+.+|+||+.+++|+++|.+|+.+||++|+++||+++++|.+
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 162 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP 162 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHH
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 5442 3578999987642 221 135899998999999999999999999999999999999999999999
Q ss_pred HhcCCCCCccceeecccCCCCCCCCCCCcccccCCCceEEEEecCCCCeeEEe-eCCcEEEcCCCCCcEEEehhhHHHHH
Q 020953 146 VFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPLRHSIVVNLGDQIEVI 224 (319)
Q Consensus 146 ~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~-~~g~W~~V~p~~~~~vVniGD~L~~~ 224 (319)
.+.. +.+.+|++|||||+.++..+|+++|||+|+||||+|| .++||||+ ++|+|++|+|+||++||||||+||+|
T Consensus 163 ~~~~---~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~ 238 (312)
T 3oox_A 163 TVQD---GNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERL 238 (312)
T ss_dssp HHTT---CCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred HhcC---CcceeeeEecCCCCCCcCCcCccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHH
Confidence 8864 3467999999999886555899999999999999998 59999997 57999999999999999999999999
Q ss_pred hCCccccccceeecCC----CCCCceeeEEeecCCCCceEecCccccccccccCCCCC-CccHHHHHHHHhc
Q 020953 225 TNGKYKSVEHRVVSQT----DGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYP-KFVFEDYMKLYVP 291 (319)
Q Consensus 225 TnG~~~s~~HRV~~~~----~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~~~y~-~~~~~ey~~~~~~ 291 (319)
|||+||||+|||++++ ..+ |||++||++|+.|++|+|+++|++++ +|++|+ ++|++||++.++.
T Consensus 239 TnG~~kS~~HRVv~~~~~~~~~~-R~Sia~F~~P~~d~~i~pl~~~v~~~--~p~~y~~~~t~~eyl~~r~~ 307 (312)
T 3oox_A 239 TNNVLPSTVHRVVNPPPERRGVP-RYSTPFFLHFASDYEIKTLQNCVTAE--NPDRYPESITADEFLQQRLR 307 (312)
T ss_dssp TTTSSCCCCEEECCCCGGGTTSC-EEECCEEECCCTTCEECCCGGGCCSS--SCCSCSSCEEHHHHHHHHHH
T ss_pred hCCeecCCCceEeCCCccCCCCC-EEEEEEEecCCCCcEEecCccccCCC--CcccCCCCeeHHHHHHHHHH
Confidence 9999999999998764 335 99999999999999999999999875 589999 9999999998764
No 3
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=9.7e-77 Score=559.04 Aligned_cols=291 Identities=29% Similarity=0.553 Sum_probs=255.8
Q ss_pred CCCeeecCCCCC---chHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhhCCHHHHHHhhhc-----CCCc
Q 020953 3 NFPVISLENING---AERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVA-----SRAL 74 (319)
Q Consensus 3 ~iPvIDls~l~~---~~~~~~~~~l~~A~~~~Gff~l~nhgI~~~l~~~~~~~~~~fF~lp~e~K~~~~~~-----~~gy 74 (319)
+||||||+.+.+ .+|.+++++|.+||++||||||+|||||.++++++++.+++||+||.|+|+++... .+||
T Consensus 46 ~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy 125 (356)
T 1gp6_A 46 QVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGY 125 (356)
T ss_dssp CCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEE
T ss_pred CCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCcccc
Confidence 599999999853 34778999999999999999999999999999999999999999999999986432 3455
Q ss_pred ccccc--cccCCCcccccccccCCC--CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcCC
Q 020953 75 EGIQT--EVNDMDWESTFYVRHLPQ--STINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFHGA 150 (319)
Q Consensus 75 ~~~~~--~~~~~d~~e~~~~~~~p~--~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~ 150 (319)
..... .....||+|.|.+...|. ...|.||+.+++||+.+++|+++|.+|+.+||++|+++||+++++|.+.+...
T Consensus 126 ~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~ 205 (356)
T 1gp6_A 126 GSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGL 205 (356)
T ss_dssp ECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHH
T ss_pred CcCcccCCCCCCChhheeeeecCCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccc
Confidence 43221 234679999998754442 34688999899999999999999999999999999999999999999987521
Q ss_pred CCCccceeecccCCCCCCCCCCCcccccCCCceEEEEecCCCCeeEEeeCCcEEEcCCCCCcEEEehhhHHHHHhCCccc
Q 020953 151 NGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNGKYK 230 (319)
Q Consensus 151 ~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~g~W~~V~p~~~~~vVniGD~L~~~TnG~~~ 230 (319)
..+.+.+|++|||||+.++..+|+++|||+|+||||+|| .++||||+++|+|++|+|+||++||||||+||+||||+||
T Consensus 206 ~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~k 284 (356)
T 1gp6_A 206 EELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYK 284 (356)
T ss_dssp HHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSC
T ss_pred CCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEc-CCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEee
Confidence 013467999999999998888999999999999999998 4999999999999999999999999999999999999999
Q ss_pred cccceeecCCCCCCceeeEEeecCCCCc-eEecCccccccccccCCCCCCccHHHHHHHHhccccCCc
Q 020953 231 SVEHRVVSQTDGEGRMSLASFYNPGSDA-VIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVPLKFQAK 297 (319)
Q Consensus 231 s~~HRV~~~~~~~~R~Si~~F~~p~~d~-~i~p~~~~~~~~~~~~~~y~~~~~~ey~~~~~~~~~~~~ 297 (319)
|++|||+.++..+ |||++||++|+.|+ +|.|+++|++++ +|++|+++|++||++.++.+++.++
T Consensus 285 S~~HRVv~~~~~~-R~Sia~F~~P~~d~~~i~pl~~~~~~~--~p~~y~~~t~~eyl~~~~~~~~d~~ 349 (356)
T 1gp6_A 285 SILHRGLVNKEKV-RISWAVFCEPPKDKIVLKPLPEMVSVE--SPAKFPPRTFAQHIEHKLFGKEQEE 349 (356)
T ss_dssp CCCEEECCCSSCC-EEEEEEEEECCTTTCEECCCGGGCCSS--SCCSSCCEEHHHHHHHHHHHHHHHH
T ss_pred ccCceecCCCCCC-EEEEEEeecCCCCCcEEeCChhhcCCC--CCccCCCccHHHHHHHHHHhccCcc
Confidence 9999999887767 99999999999999 999999999864 5899999999999999887777544
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=9.8e-73 Score=527.29 Aligned_cols=278 Identities=25% Similarity=0.337 Sum_probs=245.2
Q ss_pred CCCCeeecCCCCC---chHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHH-hhCCHHHHHHhhhcCCCcccc
Q 020953 2 ENFPVISLENING---AERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAH-YRKCMEQRFKELVASRALEGI 77 (319)
Q Consensus 2 ~~iPvIDls~l~~---~~~~~~~~~l~~A~~~~Gff~l~nhgI~~~l~~~~~~~~~~f-F~lp~e~K~~~~~~~~gy~~~ 77 (319)
.+||||||+.+.+ .+|.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +||.+.
T Consensus 7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~--~Gy~~~ 81 (331)
T 1odm_A 7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI--RAYNKE 81 (331)
T ss_dssp CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC--TTTCTT
T ss_pred CCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh--cCCCcC
Confidence 4599999998742 357789999999999999999999999 999999999999 9999999998754 788766
Q ss_pred cccc----------cCCCcccccccccCC------------CCCCCCCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020953 78 QTEV----------NDMDWESTFYVRHLP------------QSTINEVPDL--DEEYRKVMKEFALKLEKLAEELLDLLC 133 (319)
Q Consensus 78 ~~~~----------~~~d~~e~~~~~~~p------------~~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~la 133 (319)
+.+. ...||+|.|++.... ...+|.||+. +|+||+.+++|+++|.+|+.+||++|+
T Consensus 82 ~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la 161 (331)
T 1odm_A 82 HQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYA 161 (331)
T ss_dssp CTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5431 467999999875321 2346899987 899999999999999999999999999
Q ss_pred HhcCCChhHHHHHhcCCCCCcccee--ecccC------C---CCCCCC-CCCcccccCCCceEEEEecCCCCeeEEe-eC
Q 020953 134 ENLGLEKGYLKKVFHGANGPTFGTK--VSNYP------P---CPKPDL-IKGLRAHTDAGGIILLFQDDKVSGLQLL-KD 200 (319)
Q Consensus 134 ~~Lgl~~~~~~~~~~~~~~~~~~lr--l~~Yp------~---~~~~~~-~~g~~~HtD~g~lTlL~qd~~~~GLqV~-~~ 200 (319)
++||+++++|.+.+.. +.+.+| ++||| | |++++. .+|+++|||+|+||||+|| .++||||+ ++
T Consensus 162 ~~Lgl~~~~f~~~~~~---~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~~ 237 (331)
T 1odm_A 162 LALGKEENFFARHFKP---DDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQS-NVQNLQVETAA 237 (331)
T ss_dssp HHTTSCTTTTGGGCCT---TTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEEC-SSCCEEEEETT
T ss_pred HHhCCCHHHHHHHhcC---cHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeC-CCCCEEEEcCC
Confidence 9999999999988754 346799 99999 7 777776 7899999999999999998 49999999 56
Q ss_pred CcEEEcCCCCCcEEEehhhHHHHHhCCccccccceeecCCCCCCceeeEEeecCCCCceEecCccccccccccCCCCCCc
Q 020953 201 GQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTDGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKF 280 (319)
Q Consensus 201 g~W~~V~p~~~~~vVniGD~L~~~TnG~~~s~~HRV~~~~~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~~~y~~~ 280 (319)
| |++|+|+||++||||||+||+||||+|||++|||+++ ..+ |||++||++|+.|++|.|+++|++++ + ++|+++
T Consensus 238 g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~-R~Sia~F~~P~~d~~i~pl~~~~~~~--~-~~y~~~ 311 (331)
T 1odm_A 238 G-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAE-RQSLPFFVNLGYDSVIDPFDPREPNG--K-SDREPL 311 (331)
T ss_dssp E-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSC-EEEEEEEECCCTTCBCCCCCTTSTTC--C-CSSCCC
T ss_pred C-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCC-EEEEEEEEcCCCCCEEeCCCcccccc--c-cCCCCc
Confidence 8 9999999999999999999999999999999999965 556 99999999999999999999999865 3 799999
Q ss_pred cHHHHHHHHhcccc
Q 020953 281 VFEDYMKLYVPLKF 294 (319)
Q Consensus 281 ~~~ey~~~~~~~~~ 294 (319)
|++||++.+++..+
T Consensus 312 t~~e~l~~~~~~~~ 325 (331)
T 1odm_A 312 SYGDYLQNGLVSLI 325 (331)
T ss_dssp BHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 99999998876543
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=6.7e-73 Score=523.97 Aligned_cols=275 Identities=16% Similarity=0.229 Sum_probs=230.1
Q ss_pred CCCCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhhCC-HHHHHHhhhc----CCCccc
Q 020953 2 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKC-MEQRFKELVA----SRALEG 76 (319)
Q Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI~~~l~~~~~~~~~~fF~lp-~e~K~~~~~~----~~gy~~ 76 (319)
.+||||||+.+.+.+.. ++|.+||++||||||+|||||.++++++++.+++||+|| .|+|+++... .+||..
T Consensus 3 ~~iPvIDls~l~~~~~~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~ 79 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTG 79 (311)
T ss_dssp CCCCEEEHHHHHTTCSH---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEE
T ss_pred CCCcEEEchhhcCCCHH---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceee
Confidence 45999999977432222 389999999999999999999999999999999999999 9999986532 367775
Q ss_pred cccc--------ccCCCcccccccccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----ChhHHH
Q 020953 77 IQTE--------VNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGL----EKGYLK 144 (319)
Q Consensus 77 ~~~~--------~~~~d~~e~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl----~~~~~~ 144 (319)
.+.+ ....||+|.|.+... +|.|| +|+||+.+++|+++|.+|+.+||++|+++||+ ++++|.
T Consensus 80 ~~~e~~~~~~~~~~~~d~~E~~~~~~~----~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~ 153 (311)
T 1dcs_A 80 LESESTAQITNTGSYSDYSMCYSMGTA----DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFL 153 (311)
T ss_dssp C-----------------CEEEEECSS----SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHH
T ss_pred ccccccccccCCCCCCCcceeeeccCC----CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHh
Confidence 5432 246799999988633 57899 79999999999999999999999999999999 888887
Q ss_pred HHhcCCCCCccceeecccCCCCCCC--C--CCCcccccCCCceEEEEecCCCCe---eEEeeCCcEEEcCCCCCcEEEeh
Q 020953 145 KVFHGANGPTFGTKVSNYPPCPKPD--L--IKGLRAHTDAGGIILLFQDDKVSG---LQLLKDGQWIDVPPLRHSIVVNL 217 (319)
Q Consensus 145 ~~~~~~~~~~~~lrl~~Yp~~~~~~--~--~~g~~~HtD~g~lTlL~qd~~~~G---LqV~~~g~W~~V~p~~~~~vVni 217 (319)
+. .+.+|++|||||+.++ . .+|+++|||+|+||||+||+.++| |||+++|+|++|+|+||++||||
T Consensus 154 ~~-------~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNi 226 (311)
T 1dcs_A 154 DC-------EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFC 226 (311)
T ss_dssp SC-------CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEE
T ss_pred hc-------chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEH
Confidence 53 3569999999998764 2 568999999999999999845899 99999999999999999999999
Q ss_pred hhHHHHHhCCccccccceeecCC-----CCCCceeeEEeecCCCCceEecCccccccccccCCCC--CCccHHHHHHHHh
Q 020953 218 GDQIEVITNGKYKSVEHRVVSQT-----DGEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVY--PKFVFEDYMKLYV 290 (319)
Q Consensus 218 GD~L~~~TnG~~~s~~HRV~~~~-----~~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~~~y--~~~~~~ey~~~~~ 290 (319)
||+||+||||+|||++|||++++ ..+ |||++||++|+.|++|. +++|++++ +|++| +++|++||++.++
T Consensus 227 GD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~-R~Si~~F~~p~~d~~i~-l~~~~~~~--~p~~y~~~~~t~~ey~~~~~ 302 (311)
T 1dcs_A 227 GAIATLVTGGQVKAPRHHVAAPRRDQIAGSS-RTSSVFFLRPNADFTFS-VPLARECG--FDVSLDGETATFQDWIGGNY 302 (311)
T ss_dssp CHHHHHHTTSCSCCCCEEECCC----CTTCC-EEEEEEEECCCTTCEEE-HHHHHHTT--CCCCCCSSEEEHHHHHCSSC
T ss_pred HHHHHHHhCCcccCCCceEeCCCcccCCCCC-eEEEEEEEcCCCCcEEe-CCcccCCC--CccccCCCCccHHHHHHHHH
Confidence 99999999999999999999887 455 99999999999999999 99999864 58999 9999999999887
Q ss_pred ccccCC
Q 020953 291 PLKFQA 296 (319)
Q Consensus 291 ~~~~~~ 296 (319)
+..|..
T Consensus 303 ~~~~~~ 308 (311)
T 1dcs_A 303 VNIRRT 308 (311)
T ss_dssp CCEECC
T ss_pred HHHhcc
Confidence 776653
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.2e-66 Score=475.19 Aligned_cols=254 Identities=22% Similarity=0.344 Sum_probs=214.4
Q ss_pred CCCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhhCCHHHHHHhhh---cCCCccccc-
Q 020953 3 NFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELV---ASRALEGIQ- 78 (319)
Q Consensus 3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI~~~l~~~~~~~~~~fF~lp~e~K~~~~~---~~~gy~~~~- 78 (319)
+||||||+.. +.+++|.+||++||||||+|||||.++++++++.+++||+| |+|+++.. ..+||.+.+
T Consensus 3 ~IPvIDls~~------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~~ 74 (280)
T 3on7_A 3 KLETIDYRAA------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPASI 74 (280)
T ss_dssp -CCEEETTST------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC-
T ss_pred CCCEEECCCh------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCcc
Confidence 5999999873 24789999999999999999999999999999999999998 67777532 246776544
Q ss_pred cc----ccCCCcccccccccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--hH---HHHHhcC
Q 020953 79 TE----VNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMKEFALKLEKLAEELLDLLCENLGLEK--GY---LKKVFHG 149 (319)
Q Consensus 79 ~~----~~~~d~~e~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~--~~---~~~~~~~ 149 (319)
.+ ....||+|.|.+. .||+.+++||+.+++|+++|.+|+.+||++||++||++. ++ |.+.+.+
T Consensus 75 ~e~~~~~~~~D~kE~~~~~--------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~ 146 (280)
T 3on7_A 75 SETAKGHTVKDIKEYYHVY--------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIAN 146 (280)
T ss_dssp -------CCCCSCEEEEEC--------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTT
T ss_pred ccccCCCCcccHHHHHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcC
Confidence 22 1356899988763 377778999999999999999999999999999999863 33 5555543
Q ss_pred CCCCccceeecccCCCCCCC--CCCCcccccCCCceEEEEecCCCCeeEEe-eCCcEEEcCCCCCcEEEehhhHHHHHhC
Q 020953 150 ANGPTFGTKVSNYPPCPKPD--LIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPLRHSIVVNLGDQIEVITN 226 (319)
Q Consensus 150 ~~~~~~~lrl~~Yp~~~~~~--~~~g~~~HtD~g~lTlL~qd~~~~GLqV~-~~g~W~~V~p~~~~~vVniGD~L~~~Tn 226 (319)
. ..+.+|++|||||+.++ ..+|+++|||+|+||||+|| .++||||+ ++|+|++|+|+||++||||||+||+|||
T Consensus 147 ~--~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tn 223 (280)
T 3on7_A 147 S--HKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTA-NEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASD 223 (280)
T ss_dssp C--SSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECC-SCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTT
T ss_pred C--ccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEec-CCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhC
Confidence 2 23679999999998765 46899999999999999998 58999999 4799999999999999999999999999
Q ss_pred CccccccceeecCCC---CCCceeeEEeecCCCCceEecCccccccccccCCCCCCccHHHHHHHHhc
Q 020953 227 GKYKSVEHRVVSQTD---GEGRMSLASFYNPGSDAVIYPAPALLEKEAEKKQVYPKFVFEDYMKLYVP 291 (319)
Q Consensus 227 G~~~s~~HRV~~~~~---~~~R~Si~~F~~p~~d~~i~p~~~~~~~~~~~~~~y~~~~~~ey~~~~~~ 291 (319)
|+|||++|||++++. ..+|||++||++|+.|++|+| ++|++||++.++.
T Consensus 224 g~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p----------------~ita~~~l~~rl~ 275 (280)
T 3on7_A 224 GYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE----------------RYTADSYLMERLR 275 (280)
T ss_dssp TSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS----------------SCBHHHHHHHHHH
T ss_pred CcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC----------------CccHHHHHHHHHH
Confidence 999999999998742 224999999999999999874 5899999998764
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.24 E-value=0.049 Score=47.63 Aligned_cols=79 Identities=16% Similarity=0.132 Sum_probs=52.8
Q ss_pred ceeecccCCCCCCCCCCCcccccCCC-----------ceEEEEecCC----CCe-eEEeeCCcEEEcCCCCCcEEEehhh
Q 020953 156 GTKVSNYPPCPKPDLIKGLRAHTDAG-----------GIILLFQDDK----VSG-LQLLKDGQWIDVPPLRHSIVVNLGD 219 (319)
Q Consensus 156 ~lrl~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~qd~~----~~G-LqV~~~g~W~~V~p~~~~~vVniGD 219 (319)
.+++++|.+-. -..+|.|.. .+|+++.-+. .|| |.+.....=..|+|..|.+|+.-.
T Consensus 100 ~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s- 172 (243)
T 3dkq_A 100 PPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS- 172 (243)
T ss_dssp EEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET-
T ss_pred cceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC-
Confidence 37889997732 245777763 4666553222 234 555554334789999999998742
Q ss_pred HHHHHhCCccccccceeecCCCCCCceeeEEeec
Q 020953 220 QIEVITNGKYKSVEHRVVSQTDGEGRMSLASFYN 253 (319)
Q Consensus 220 ~L~~~TnG~~~s~~HRV~~~~~~~~R~Si~~F~~ 253 (319)
.++|+|.....+. |++++.+++
T Consensus 173 -----------~~lH~v~pV~~G~-R~~~~~Wi~ 194 (243)
T 3dkq_A 173 -----------SSLHQVTPVLSGE-RTAAFMWLQ 194 (243)
T ss_dssp -----------TSEEEECCEEEEC-EEEEEEEEE
T ss_pred -----------CCeEcCccccccC-EEEEEEehh
Confidence 3689997655567 999998875
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.52 E-value=1.2 Score=37.97 Aligned_cols=44 Identities=20% Similarity=0.227 Sum_probs=32.9
Q ss_pred CcEEEcCCCCCcEEEehhhHHHHHhCCccccccceeecCCCCCCceeeEEeecCCC
Q 020953 201 GQWIDVPPLRHSIVVNLGDQIEVITNGKYKSVEHRVVSQTDGEGRMSLASFYNPGS 256 (319)
Q Consensus 201 g~W~~V~p~~~~~vVniGD~L~~~TnG~~~s~~HRV~~~~~~~~R~Si~~F~~p~~ 256 (319)
..+..|.|.+|.+||.-.. ..|.|......+.|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3567899999999987653 3799987654334999999988765
No 9
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=90.06 E-value=0.71 Score=39.41 Aligned_cols=86 Identities=17% Similarity=0.082 Sum_probs=52.4
Q ss_pred eeecccCCCCCCCCCCCcccccCCC-----------ceEEEEe--cCCCCeeEEeeCCcEEEcCCCCCcEEEehhhHHHH
Q 020953 157 TKVSNYPPCPKPDLIKGLRAHTDAG-----------GIILLFQ--DDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEV 223 (319)
Q Consensus 157 lrl~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~q--d~~~~GLqV~~~g~W~~V~p~~~~~vVniGD~L~~ 223 (319)
+++++|.+.. ...+|.|+. .+|+|+. |...||=-+..+. =+.|.|..|.+|+.-.-
T Consensus 113 lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~-~~~V~P~~G~al~f~~~---- 181 (216)
T 3itq_A 113 LHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL-NLSVHPRKGMAVYFEYF---- 181 (216)
T ss_dssp CEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTT-TEEECCCTTCEEEEECC----
T ss_pred eeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCC-CCEEecCCCeEEEEecc----
Confidence 7888997632 245777764 3777764 3223453333332 27899999998875420
Q ss_pred HhCCc-cccccceeecCCCCCCceeeEEeecC
Q 020953 224 ITNGK-YKSVEHRVVSQTDGEGRMSLASFYNP 254 (319)
Q Consensus 224 ~TnG~-~~s~~HRV~~~~~~~~R~Si~~F~~p 254 (319)
..||. -..++|+|.....+. |+++..+++-
T Consensus 182 ~~~g~~d~~~lH~~~PV~~G~-K~v~~~W~~~ 212 (216)
T 3itq_A 182 YQDQSLNELTLHGGAPVTKGE-KWIATQWVRR 212 (216)
T ss_dssp CSSHHHHHTTCEEECCEEESC-EEEEEEEEES
T ss_pred CCCCCCCCccccccceecccc-EEEEEeeEec
Confidence 01121 145799997655567 9999887753
No 10
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=88.34 E-value=0.79 Score=39.93 Aligned_cols=81 Identities=22% Similarity=0.389 Sum_probs=54.2
Q ss_pred eeecccCCCCCCCCCCCcccccCCC-----ceEEEEe--cCC----CCe-eEEeeCC--cEEEcCCCCCcEEEehhhHHH
Q 020953 157 TKVSNYPPCPKPDLIKGLRAHTDAG-----GIILLFQ--DDK----VSG-LQLLKDG--QWIDVPPLRHSIVVNLGDQIE 222 (319)
Q Consensus 157 lrl~~Yp~~~~~~~~~g~~~HtD~g-----~lTlL~q--d~~----~~G-LqV~~~g--~W~~V~p~~~~~vVniGD~L~ 222 (319)
+.+..|++. .-...+|.|.. .+|+++. +++ .|| |.+..++ ....|.|..|.+|+.-.+
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~--- 190 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD--- 190 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS---
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC---
Confidence 568888751 11356788873 5787764 221 144 6777653 678999999999987632
Q ss_pred HHhCCccccccceeecCCCCCCceeeEEeecC
Q 020953 223 VITNGKYKSVEHRVVSQTDGEGRMSLASFYNP 254 (319)
Q Consensus 223 ~~TnG~~~s~~HRV~~~~~~~~R~Si~~F~~p 254 (319)
. -.+|.|.. ..+. |+||+..+.-
T Consensus 191 ----~---~~~H~V~p-~~~~-R~sit~W~~~ 213 (247)
T 2hbt_A 191 ----R---RNPHEVQP-AYAT-RYAITVWYFD 213 (247)
T ss_dssp ----T---TCCEEECC-BSSC-EEEEEEEEEE
T ss_pred ----C---Cceeeecc-CCCE-EEEEEEEEcC
Confidence 1 16899975 4456 9999886643
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=88.34 E-value=0.75 Score=39.22 Aligned_cols=88 Identities=15% Similarity=0.220 Sum_probs=54.0
Q ss_pred eeecccCCCCCCCCCCCcccccCC--------------CceEEEEe--cCCCCe-eEEeeCC-------------cEEEc
Q 020953 157 TKVSNYPPCPKPDLIKGLRAHTDA--------------GGIILLFQ--DDKVSG-LQLLKDG-------------QWIDV 206 (319)
Q Consensus 157 lrl~~Yp~~~~~~~~~g~~~HtD~--------------g~lTlL~q--d~~~~G-LqV~~~g-------------~W~~V 206 (319)
+++++|.+.. ...+|.|. ..+|+|+. |...|| +.+...+ .-+.|
T Consensus 100 ~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V 173 (224)
T 2jig_A 100 LQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAV 173 (224)
T ss_dssp CEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEEE
T ss_pred eEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceEE
Confidence 7788887632 24567774 24777763 323345 3332211 24899
Q ss_pred CCCCCcEEEehhhHHHHHhCCcc-ccccceeecCCCCCCceeeEEeecCC
Q 020953 207 PPLRHSIVVNLGDQIEVITNGKY-KSVEHRVVSQTDGEGRMSLASFYNPG 255 (319)
Q Consensus 207 ~p~~~~~vVniGD~L~~~TnG~~-~s~~HRV~~~~~~~~R~Si~~F~~p~ 255 (319)
.|..|.+|+.-- ...||.. ..++|+|.....+. ||++..+++-.
T Consensus 174 ~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~-K~~~~~Wi~~~ 218 (224)
T 2jig_A 174 KPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGD-KWSATKWIHVA 218 (224)
T ss_dssp CCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESE-EEEEEEEEESS
T ss_pred ecccCcEEEEEe----eCCCCCCCCCCcccCCccccce-EEEEEEeEEcC
Confidence 999999887532 1123332 57899997655567 99999887643
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=75.86 E-value=7.1 Score=32.70 Aligned_cols=79 Identities=13% Similarity=0.107 Sum_probs=50.2
Q ss_pred eeecccCCCCCCCCCCCcccccCCC-------ce-EEEEecCCCCeeEEeeC----------CcEEEcCCCCCcEEEehh
Q 020953 157 TKVSNYPPCPKPDLIKGLRAHTDAG-------GI-ILLFQDDKVSGLQLLKD----------GQWIDVPPLRHSIVVNLG 218 (319)
Q Consensus 157 lrl~~Yp~~~~~~~~~g~~~HtD~g-------~l-TlL~qd~~~~GLqV~~~----------g~W~~V~p~~~~~vVniG 218 (319)
.-+|+|.+.. -++++|.|-- .| ++-+. ...=+.+... +..+.+...+|.++|.-|
T Consensus 102 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 102 VLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eEEEEECCCC-----CcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 4589997732 2578888862 22 22222 1223444421 257889999999999999
Q ss_pred hHHHHHhCCccccccceeecCC--CCCCceeeEEe
Q 020953 219 DQIEVITNGKYKSVEHRVVSQT--DGEGRMSLASF 251 (319)
Q Consensus 219 D~L~~~TnG~~~s~~HRV~~~~--~~~~R~Si~~F 251 (319)
++=..|. |.|.... ... |+|+.|-
T Consensus 175 ~~q~~w~--------H~Ip~~~~~~~~-RislTFR 200 (204)
T 3s57_A 175 PTNTHWY--------HSLPVRKKVLAP-RVNLTFR 200 (204)
T ss_dssp THHHHEE--------EEECCCTTCCSC-EEEEEEE
T ss_pred hhhheeE--------eeccccCCCCCC-EEEEEee
Confidence 9877774 7765432 234 9999984
No 13
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=71.93 E-value=4 Score=34.52 Aligned_cols=78 Identities=15% Similarity=0.115 Sum_probs=49.4
Q ss_pred eeecccCCCCCCCCCCCcccccCC-----C--ceEEEEecCCCCeeEEee---CCcEEEcCCCCCcEEEehhhHHHHHhC
Q 020953 157 TKVSNYPPCPKPDLIKGLRAHTDA-----G--GIILLFQDDKVSGLQLLK---DGQWIDVPPLRHSIVVNLGDQIEVITN 226 (319)
Q Consensus 157 lrl~~Yp~~~~~~~~~g~~~HtD~-----g--~lTlL~qd~~~~GLqV~~---~g~W~~V~p~~~~~vVniGD~L~~~Tn 226 (319)
.-+|+|.+- . ++++|.|- + .+++-+. ...=+.+.. .+..+.+...+|.++|.-|+. +.|
T Consensus 107 ~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r~~-- 175 (211)
T 3i3q_A 107 CLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RLF-- 175 (211)
T ss_dssp EEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGG-TTC--
T ss_pred EEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchH-Hce--
Confidence 458999773 2 78899992 2 2233222 123344432 267889999999999998876 212
Q ss_pred CccccccceeecCCC-------CCCceeeEEee
Q 020953 227 GKYKSVEHRVVSQTD-------GEGRMSLASFY 252 (319)
Q Consensus 227 G~~~s~~HRV~~~~~-------~~~R~Si~~F~ 252 (319)
.|.|..... .. |+|+.|-.
T Consensus 176 ------~H~I~~~~~~~~p~~~~~-RIsLTFR~ 201 (211)
T 3i3q_A 176 ------YHGIQPLKAGFHPLTIDC-RYNLTFRQ 201 (211)
T ss_dssp ------CEEECCCCCCCBTTTBTC-EEEEEEEC
T ss_pred ------EeccCcccCCcCCCCCCC-EEEEEeee
Confidence 588764432 24 99999864
No 14
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=71.85 E-value=8.7 Score=32.99 Aligned_cols=80 Identities=16% Similarity=0.147 Sum_probs=51.0
Q ss_pred eeecccCCCCCCCCCCCcccccCC--------CceEEEEecCCCCeeEEee-C----------CcEEEcCCCCCcEEEeh
Q 020953 157 TKVSNYPPCPKPDLIKGLRAHTDA--------GGIILLFQDDKVSGLQLLK-D----------GQWIDVPPLRHSIVVNL 217 (319)
Q Consensus 157 lrl~~Yp~~~~~~~~~g~~~HtD~--------g~lTlL~qd~~~~GLqV~~-~----------g~W~~V~p~~~~~vVni 217 (319)
.-+|+|.+-. -++++|.|- ...||-+.. ..=+.+.. . +..+.+...+|.++|.-
T Consensus 128 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~--~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 128 LLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGA--TRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEES--CEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCC--CEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 4589997742 267888884 222332221 12233332 1 36899999999999999
Q ss_pred hhHHHHHhCCccccccceeecC--CCCCCceeeEEee
Q 020953 218 GDQIEVITNGKYKSVEHRVVSQ--TDGEGRMSLASFY 252 (319)
Q Consensus 218 GD~L~~~TnG~~~s~~HRV~~~--~~~~~R~Si~~F~ 252 (319)
|++=..|. |.|... .... |+|+.|=.
T Consensus 201 G~~r~~w~--------H~I~~~~~~~~~-RIsLTfR~ 228 (238)
T 2iuw_A 201 GATQADWQ--------HRVPKEYHSREP-RVNLTFRT 228 (238)
T ss_dssp ETHHHHEE--------EEECCCSSCCCC-EEEEEEEC
T ss_pred hhhhCccE--------ecCCCcCCCCCC-EEEEEeee
Confidence 99877774 665432 1345 99999865
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=64.06 E-value=8.2 Score=35.22 Aligned_cols=92 Identities=23% Similarity=0.222 Sum_probs=57.9
Q ss_pred eeecccCCCCCCCCCCCcccccCCC-----ceEEEEecCCCCeeEEee-CCcEEEcCCCCCcEEEehhhHHHHHhCCccc
Q 020953 157 TKVSNYPPCPKPDLIKGLRAHTDAG-----GIILLFQDDKVSGLQLLK-DGQWIDVPPLRHSIVVNLGDQIEVITNGKYK 230 (319)
Q Consensus 157 lrl~~Yp~~~~~~~~~g~~~HtD~g-----~lTlL~qd~~~~GLqV~~-~g~W~~V~p~~~~~vVniGD~L~~~TnG~~~ 230 (319)
.-+|+|.+- -++++|.|-. .|..|-- +...=+.+.. +|.++.+...+|.++|.-|++=..|.-|.-+
T Consensus 200 ~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~ 272 (345)
T 3tht_A 200 MTINQYEPG------QGIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGITC 272 (345)
T ss_dssp EEEEEECTT------CCEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEECC
T ss_pred EEEEEecCC------CCEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCCc
Confidence 458899762 1688899874 2222221 1123344443 4779999999999999999999888665444
Q ss_pred cccceee------------------cCCCCCCceeeEEeecCCC
Q 020953 231 SVEHRVV------------------SQTDGEGRMSLASFYNPGS 256 (319)
Q Consensus 231 s~~HRV~------------------~~~~~~~R~Si~~F~~p~~ 256 (319)
-...-+- ..+.+. |+|+.|=.-+..
T Consensus 273 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~-RiSlT~R~v~~~ 315 (345)
T 3tht_A 273 RKFDTVQASESLKSGIITSDVGDLTLSKRGL-RTSFTFRKVRQT 315 (345)
T ss_dssp CSEEEEESGGGSSCEECCSSSSCEEEEECCC-EEEEEEECBCSS
T ss_pred ccCCccCcccccccccccccCCCceeccCCC-EEEEEEEecCCC
Confidence 3222211 011235 999999876654
No 16
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=51.49 E-value=6.9 Score=32.87 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=28.9
Q ss_pred CCCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCC
Q 020953 3 NFPVISLENINGAERAAILEKINEACENWGFFELVNHGI 41 (319)
Q Consensus 3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI 41 (319)
.||++++....+ .++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~---~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGS---PELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTC---HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCc---HHHHHHHHHHhccCCEEEEcCCCc
Confidence 589999875432 456888999998888899999996
No 17
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=49.36 E-value=7.7 Score=36.65 Aligned_cols=53 Identities=13% Similarity=0.137 Sum_probs=39.0
Q ss_pred CCCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhhC
Q 020953 3 NFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRK 59 (319)
Q Consensus 3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI~~~l~~~~~~~~~~fF~l 59 (319)
-||.|||+++.. ..+.+...+.+++.||+.|.| -||.+...+..+...+|.+.
T Consensus 100 ~iP~i~f~di~~---~~~s~~~~~~ir~rG~vVIRg-vvp~e~A~~~~~~~~~yl~~ 152 (461)
T 2dbn_A 100 VWPVLSYADIKA---GHVTAEQREQIKRRGCAVIKG-HFPREQALGWDQSMLDYLDR 152 (461)
T ss_dssp SSCEEEHHHHHH---TCCCHHHHHHHHHHSEEEEET-SSCHHHHHHHHHHHHHHHHH
T ss_pred CcceecHHHhcC---CCCCHHHHHHHHhccEEEECC-CCCHHHHHHHHHHHHHHHHh
Confidence 599999987631 112345677889999998887 48998888887777777644
No 18
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=45.62 E-value=21 Score=20.17 Aligned_cols=18 Identities=28% Similarity=0.643 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHhccEEE
Q 020953 18 AAILEKINEACENWGFFE 35 (319)
Q Consensus 18 ~~~~~~l~~A~~~~Gff~ 35 (319)
.++++.+.-.|.+-|||+
T Consensus 9 s~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHhccCcccc
Confidence 567889999999999998
No 19
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=43.96 E-value=9.6 Score=32.02 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=28.5
Q ss_pred CCCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCC
Q 020953 3 NFPVISLENINGAERAAILEKINEACENWGFFELVNHGI 41 (319)
Q Consensus 3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI 41 (319)
.||++++....+ .++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~---~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGT---RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTC---HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCc---HHHHHHHHHHhccCCEEEEcCCCc
Confidence 589998875432 356788999998888889999996
No 20
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=42.06 E-value=13 Score=31.74 Aligned_cols=36 Identities=19% Similarity=0.191 Sum_probs=28.5
Q ss_pred CCCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCC
Q 020953 3 NFPVISLENINGAERAAILEKINEACENWGFFELVNHGI 41 (319)
Q Consensus 3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI 41 (319)
.||++++.... ..++++.+.+++++.-.+.+.|||+
T Consensus 161 ~v~~~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 161 GISVVEFEKPG---SVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp CCEEECCCSTT---CHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CceEecCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 58899886542 2456788899998888899999996
No 21
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=41.41 E-value=12 Score=31.17 Aligned_cols=35 Identities=14% Similarity=0.297 Sum_probs=26.5
Q ss_pred CCCeeecCCCCCchHHHHHHHHHHHHHhcc---EEEEEcCCC
Q 020953 3 NFPVISLENINGAERAAILEKINEACENWG---FFELVNHGI 41 (319)
Q Consensus 3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~G---ff~l~nhgI 41 (319)
.||++++. .+..++++.+.+++.+.+ .+.|.|||+
T Consensus 139 ~vp~~~~~----~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNE----QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCC----SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCC----CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 47777763 234678888999998865 788899996
No 22
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.08 E-value=14 Score=25.38 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc
Q 020953 108 EEYRKVMKEFALKLEKLAEELLDLLCENLGLEKGYLKKVFH 148 (319)
Q Consensus 108 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~ 148 (319)
.+-+..++.||..-.+-...-+..||..+||+.+....+|.
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 35688999999999999888999999999999988777663
No 23
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=40.46 E-value=13 Score=30.96 Aligned_cols=36 Identities=19% Similarity=0.169 Sum_probs=28.0
Q ss_pred CCCee-ecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCC
Q 020953 3 NFPVI-SLENINGAERAAILEKINEACENWGFFELVNHGI 41 (319)
Q Consensus 3 ~iPvI-Dls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI 41 (319)
.||++ ++....+ .++++.+.+++.+.-.+.|.|||+
T Consensus 117 ~ip~~~~y~~~g~---~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSAT---EEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSSS---HHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCCc---HHHHHHHHHHhCcCCEEEECCCCc
Confidence 58899 7765432 466788899998888899999995
No 24
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=37.81 E-value=13 Score=32.65 Aligned_cols=36 Identities=11% Similarity=0.108 Sum_probs=28.4
Q ss_pred CCCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCC
Q 020953 3 NFPVISLENINGAERAAILEKINEACENWGFFELVNHGI 41 (319)
Q Consensus 3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI 41 (319)
.||++++....+ .++++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g~---~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGT---DAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSS---HHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCC---HHHHHHHHHHHccCCEEEEcCCCc
Confidence 588888865422 467888999999888899999996
No 25
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=36.55 E-value=18 Score=33.39 Aligned_cols=52 Identities=17% Similarity=0.147 Sum_probs=37.1
Q ss_pred CCCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHHhhC
Q 020953 3 NFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRK 59 (319)
Q Consensus 3 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI~~~l~~~~~~~~~~fF~l 59 (319)
++|-|||+.+..+ .+...++.+++.++|++.+.|-.++.+. ..+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~--d~~~~~~~~~l~~~Gvv~frg~~~~~~~---~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY--DEHAYKWLSTLKKVGIVRLTGASDKPGE---VSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC--HHHHHHHHHHHHHHSEEEEECCCSSTTH---HHHHHHHHSCC
T ss_pred CCCccCHHHHhcC--HHHHHHHHHHHHhcCEEEEeCCCCCHHH---HHHHHHHhCCC
Confidence 5788888765322 3567889999999999999998887543 33456666444
No 26
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=32.59 E-value=25 Score=30.78 Aligned_cols=38 Identities=18% Similarity=0.165 Sum_probs=28.6
Q ss_pred CCCCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCC
Q 020953 2 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGI 41 (319)
Q Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI 41 (319)
..||++|+..+.. ..++++.+.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~--~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIAL--DLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSC--CHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCC--CHHHHHHHHHHhCcCCEEEEcCCce
Confidence 3588888876421 1345778888999999999999996
No 27
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=30.46 E-value=43 Score=28.89 Aligned_cols=47 Identities=15% Similarity=0.127 Sum_probs=32.0
Q ss_pred CCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCCCChHHHHHHHHHHHHH
Q 020953 4 FPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAH 56 (319)
Q Consensus 4 iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhgI~~~l~~~~~~~~~~f 56 (319)
|+-||++...+ .+..++|.+++.++|++.+.+-.++.+... +.++.|
T Consensus 18 i~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~frg~~~~~~~~~---~~~~~~ 64 (283)
T 1otj_A 18 ISGADLTRPLS---DNQFEQLYHAVLRHQVVFLRDQAITPQQQR---ALAQRF 64 (283)
T ss_dssp EESCCSSSCCC---HHHHHHHHHHHHHHSEEEECSCCCCHHHHH---HHHHTT
T ss_pred EECCCcCccCC---HHHHHHHHHHHHHCCEEEECCCCCCHHHHH---HHHHHh
Confidence 45567766322 234788999999999999998887655433 334444
No 28
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=26.29 E-value=86 Score=27.65 Aligned_cols=63 Identities=14% Similarity=0.103 Sum_probs=38.4
Q ss_pred cccccCC--------CceEEEEecCCCCeeEEeeCCcEEEcCCCCCc-EEEehhhHHHHHhCCccccccceeecCCCCCC
Q 020953 174 LRAHTDA--------GGIILLFQDDKVSGLQLLKDGQWIDVPPLRHS-IVVNLGDQIEVITNGKYKSVEHRVVSQTDGEG 244 (319)
Q Consensus 174 ~~~HtD~--------g~lTlL~qd~~~~GLqV~~~g~W~~V~p~~~~-~vVniGD~L~~~TnG~~~s~~HRV~~~~~~~~ 244 (319)
+.+|.|+ +.+-+...=...+|....-+|+-+..++ |. ..+|. +..|.|.+.+...
T Consensus 104 I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d~-------------~~~H~v~N~g~~~- 167 (290)
T 1e5r_A 104 VIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLDA-------------ATVHSAVNFSEIS- 167 (290)
T ss_dssp EEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECCT-------------TSCEEEEESSSSC-
T ss_pred eeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEcC-------------CCeeEEEcCCCCC-
Confidence 6789998 2233322111246777666675554444 43 33332 3579999988777
Q ss_pred ceeeEEee
Q 020953 245 RMSLASFY 252 (319)
Q Consensus 245 R~Si~~F~ 252 (319)
|+.+.+=+
T Consensus 168 RIhLv~D~ 175 (290)
T 1e5r_A 168 RQSLCVDF 175 (290)
T ss_dssp CCEEEEEE
T ss_pred eEEEEEEe
Confidence 99998755
No 29
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=25.30 E-value=70 Score=20.04 Aligned_cols=24 Identities=21% Similarity=0.379 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHhcCCChhHH
Q 020953 120 KLEKLAEELLDLLCENLGLEKGYL 143 (319)
Q Consensus 120 ~~~~l~~~ll~~la~~Lgl~~~~~ 143 (319)
+-.+|+..|.+++++.||.++++.
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 456788899999999999998653
No 30
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=24.56 E-value=18 Score=26.15 Aligned_cols=24 Identities=33% Similarity=0.519 Sum_probs=17.1
Q ss_pred CcEEEehhhHHHHHhCCccccccceeec
Q 020953 211 HSIVVNLGDQIEVITNGKYKSVEHRVVS 238 (319)
Q Consensus 211 ~~~vVniGD~L~~~TnG~~~s~~HRV~~ 238 (319)
..|.+.. ..-|||||||++.-|+.
T Consensus 43 srftisl----rktsngrykstlklvvp 66 (131)
T 2vf9_A 43 SRFTISL----RKTSNGRYKSTLKLVVP 66 (131)
T ss_dssp EEEEEEE----EECTTSEEEEEEEEEEE
T ss_pred ceEEEEE----EecCCCceeeeEEEEEE
Confidence 3355543 34589999999988874
No 31
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=24.50 E-value=65 Score=28.09 Aligned_cols=49 Identities=16% Similarity=0.096 Sum_probs=32.8
Q ss_pred CCeeecCCCCCchHHHHHHHHHHHHHhccEEEEEcCC-CChHHHHHHHHHHHHHhh
Q 020953 4 FPVISLENINGAERAAILEKINEACENWGFFELVNHG-IEPEFMDTVERLTKAHYR 58 (319)
Q Consensus 4 iPvIDls~l~~~~~~~~~~~l~~A~~~~Gff~l~nhg-I~~~l~~~~~~~~~~fF~ 58 (319)
|+-||++...+ .+..++|.+++.++|++.+.+-. ++.+ +..+.++.|-.
T Consensus 28 i~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~fRg~~~l~~~---~~~~~~~~fG~ 77 (301)
T 1oih_A 28 IRGVKLSPDLD---AATVEAIQAALVRHKVIFFRGQTHLDDQ---SQEGFAKLLGE 77 (301)
T ss_dssp EESCCCCTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHTTSC
T ss_pred EeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHHhCC
Confidence 44567765322 23477899999999999999877 7753 34444555543
No 32
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=22.77 E-value=82 Score=27.73 Aligned_cols=49 Identities=10% Similarity=0.076 Sum_probs=34.2
Q ss_pred CCeeecCC-CCCchHHHHHHHHHHHHHhccEEEEEcC-CCChHHHHHHHHHHHHHhhC
Q 020953 4 FPVISLEN-INGAERAAILEKINEACENWGFFELVNH-GIEPEFMDTVERLTKAHYRK 59 (319)
Q Consensus 4 iPvIDls~-l~~~~~~~~~~~l~~A~~~~Gff~l~nh-gI~~~l~~~~~~~~~~fF~l 59 (319)
|+=|||+. ++ .+..++|.+|+.++|.+.+.+- .++.+. ..+.++.|=.+
T Consensus 22 i~gvdl~~~L~----d~~~~~l~~al~~~gvv~fR~q~~l~~~~---~~~fa~~fG~l 72 (301)
T 3r1j_A 22 VDGVRLGGDLD----DATVEQIRRALLTHKVIFFRHQHHLDDSR---QLEFARLLGTP 72 (301)
T ss_dssp EESCCCSTTCC----HHHHHHHHHHHHHHSEEEECCCTTCCHHH---HHHHHHHHSCB
T ss_pred EeCCCccccCC----HHHHHHHHHHHHHCCEEEECCCCCCCHHH---HHHHHHhcCCc
Confidence 45567773 42 3457789999999999999998 787653 34456666444
No 33
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=22.16 E-value=95 Score=19.64 Aligned_cols=23 Identities=17% Similarity=0.182 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHhcCCChhHH
Q 020953 121 LEKLAEELLDLLCENLGLEKGYL 143 (319)
Q Consensus 121 ~~~l~~~ll~~la~~Lgl~~~~~ 143 (319)
-.+++..|.+++++.||.++++.
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 46788889999999999997753
No 34
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=21.84 E-value=69 Score=17.40 Aligned_cols=15 Identities=20% Similarity=0.430 Sum_probs=11.1
Q ss_pred CeeEEeeCCcEEEcC
Q 020953 193 SGLQLLKDGQWIDVP 207 (319)
Q Consensus 193 ~GLqV~~~g~W~~V~ 207 (319)
+-..|+++|.|+...
T Consensus 10 g~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 10 AQAYVRKFGEWVLLS 24 (27)
T ss_dssp SCEEEEETTEEEEGG
T ss_pred cceeEEEcCeEEEcc
Confidence 335678899999764
No 35
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=21.49 E-value=1.8e+02 Score=23.34 Aligned_cols=41 Identities=7% Similarity=0.212 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHHHhccEEEEEcC-CCChHHHHHHHHHHHHH
Q 020953 16 ERAAILEKINEACENWGFFELVNH-GIEPEFMDTVERLTKAH 56 (319)
Q Consensus 16 ~~~~~~~~l~~A~~~~Gff~l~nh-gI~~~l~~~~~~~~~~f 56 (319)
.+.+++++|.+.+++...++++++ |++...+.++....++-
T Consensus 7 ~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~~ 48 (180)
T 1zav_A 7 QKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREK 48 (180)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 467788999999999999998865 89988888877766543
No 36
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=20.96 E-value=1.8e+02 Score=23.13 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHHhcc-EEEEEc-CCCChHHHHHHHHHHH
Q 020953 16 ERAAILEKINEACENWG-FFELVN-HGIEPEFMDTVERLTK 54 (319)
Q Consensus 16 ~~~~~~~~l~~A~~~~G-ff~l~n-hgI~~~l~~~~~~~~~ 54 (319)
.+.+++++|.+.+++.. .+++++ +|++...+.++....+
T Consensus 5 ~K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 5 RNVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 45678899999999988 666665 5899877777766554
Done!