Citrus Sinensis ID: 020957


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
MQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFYANPQECFCEGTNCADLPGYGNLSGIQGAKVSDLLS
cccccccccccEEEEEcccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHcccccccHHHHHHHHHHHHHccccccccccHHHHHccccccccHHHHHHHHHHcccccccEEEEEccccccccccHHHHHHHcccHHHHHccccHHHHHHHHcccHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHcccccEEcccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccEEccccccccccccccccccccccccccccccccccccccccccccccccc
cccHHHHHcccEEEEcccHHHHHcccccHHHHHHEEHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEEEcccEEEEccccccccHHHHHHHHHHHHHccccEEEEEcHHHHHHcccccccHHHHHHHHHHcccccccEEEEEEcEcccccHHHHHHHHHcccccEccccccHHHHHHccccHHHHHHHHHEEEccccEEEEcccccHHHHHHcHHHHccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccccHHcccccccccccccccHHccccccccccccccHHHHcc
mqilphfskhkvlhfnrtdtrlanngipfdlqklrcrvnfqglkftpkiETLGYELVRILQEKGPFVALHLRYEMDMLafsgcthgcsmgeAEELKRLRYAYPWWREKEIVseerrsqglcpltpEEAALVLQALgidkdthiYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVStasdifiptydgnmaKVVEGHRRYLGFKKSILLDRKILVGLLdmhhngtlsfNEFTVAVRLAHEkrmgqptrrrviadkpkeedyfyanpqecfcegtncadlpgygnlsgiqgakvsdlls
mqilphfskhkvlhfnrtdtrlanngipfdlqKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAhekrmgqptrrrviadkpkeEDYFYANPQECFCEGTNCADLPGYGnlsgiqgakvsdlls
MQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFYANPQECFCEGTNCADLPGYGNLSGIQGAKVSDLLS
******FSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHE******************EDYFYANPQECFCEGTNCADLPGYGNLSGI**********
MQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKE*****RRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPA********SSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRL***********************YFYANPQEC*****************************
MQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFYANPQECFCEGTNCADLPGYGNLSGIQGAKVSDLLS
MQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTRR*VIADKPKEEDYFYANPQECFCEGT************************
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MQILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFYANPQECFCEGTNCADLPGYGNLSGIQGAKVSDLLS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query319 2.2.26 [Sep-21-2011]
Q8W486519 Uncharacterized protein A no no 0.855 0.526 0.384 1e-44
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=1 SV=1 Back     alignment and function desciption
 Score =  180 bits (456), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/289 (38%), Positives = 158/289 (54%), Gaps = 16/289 (5%)

Query: 9   KHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQEKGPFVA 68
           +H  ++      RLA      + Q+LRCRVN+  L+F P I  L   +V  L+ +G F++
Sbjct: 199 EHSAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIMKLSESIVDKLRSQGHFMS 258

Query: 69  LHLRYEMDMLAFSGCTHGCSMGEAEELKRLR-YAYPWWREKEIVSEERRSQGLCPLTPEE 127
           +HLR+EMDMLAF+GC     +   EE K LR Y    + +K ++  ERR+ G CPLTPEE
Sbjct: 259 IHLRFEMDMLAFAGC---FDIFNPEEQKILRKYRKENFADKRLIYNERRAIGKCPLTPEE 315

Query: 128 AALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSS 187
             L+L+A+  D  T IY+AAGE++GGE+ +   R  FPR+      +DP+E     +   
Sbjct: 316 VGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRL-DNHSSVDPSEELSATSQGL 374

Query: 188 QMAALDFMVSTASDIFIPTYDG--NMAKVVEGHRRYLGFKKSILLDRKILVGLLDMHHNG 245
             +A+D+MV   SDIF+PTYDG  N A  + GHR Y GF+ +I  DRK L  +      G
Sbjct: 375 IGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTIRPDRKALAPIFIAREKG 434

Query: 246 TLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFYANP-QECFCE 293
             +  E  V  R+  +   G P +R          + FY N   ECFC+
Sbjct: 435 KRAGFEEAVR-RVMLKTNFGGPHKR-------VSPESFYTNSWPECFCQ 475





Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
255562950 520 conserved hypothetical protein [Ricinus 0.968 0.594 0.844 1e-155
224108966 500 predicted protein [Populus trichocarpa] 0.952 0.608 0.848 1e-152
224101395 493 predicted protein [Populus trichocarpa] 0.965 0.624 0.814 1e-151
42562051 499 O-fucosyltransferase family protein [Ara 0.959 0.613 0.794 1e-146
5080778 509 Similar to auxin-independent growth prom 0.959 0.601 0.794 1e-146
8778398 507 F16A14.24 [Arabidopsis thaliana] 0.959 0.603 0.794 1e-146
225462928 504 PREDICTED: DUF246 domain-containing prot 0.968 0.613 0.796 1e-145
297844310 497 hypothetical protein ARALYDRAFT_471563 [ 0.943 0.605 0.790 1e-143
449478380 503 PREDICTED: LOW QUALITY PROTEIN: DUF246 d 0.965 0.612 0.762 1e-142
449434758 503 PREDICTED: DUF246 domain-containing prot 0.965 0.612 0.762 1e-142
>gi|255562950|ref|XP_002522480.1| conserved hypothetical protein [Ricinus communis] gi|223538365|gb|EEF39972.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 261/309 (84%), Positives = 280/309 (90%)

Query: 2   QILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQ 61
           QILP FSK KVLHFN+TD RLANNGIP DLQKLRCRVNFQ LKFT +IE+LGY+LVRILQ
Sbjct: 198 QILPLFSKVKVLHFNKTDARLANNGIPVDLQKLRCRVNFQALKFTSQIESLGYKLVRILQ 257

Query: 62  EKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLC 121
           E+GPFVALHLRYEMDMLAFSGCTHGC+  EAEELK+LRYAYPWWREKEIVSEERRSQGLC
Sbjct: 258 ERGPFVALHLRYEMDMLAFSGCTHGCTKEEAEELKQLRYAYPWWREKEIVSEERRSQGLC 317

Query: 122 PLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQL 181
           PLTPEE AL+LQALG DK+T IYIAAGEIYG E RLAALRAAFP IVRKEMLLDPAELQ 
Sbjct: 318 PLTPEETALILQALGFDKETQIYIAAGEIYGSESRLAALRAAFPLIVRKEMLLDPAELQQ 377

Query: 182 FQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDM 241
           FQNHSSQMAALDFMVS AS+ FIPTYDGNMAKVVEGHRRYLGFKK+ILLDRK LV LLD+
Sbjct: 378 FQNHSSQMAALDFMVSIASNTFIPTYDGNMAKVVEGHRRYLGFKKTILLDRKKLVELLDL 437

Query: 242 HHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFYANPQECFCEGTNCADLP 301
           H NGTL++N+F VAV+ AHEKRMGQP+RR+VIADKPKEEDYFYANPQEC CEGTNC DL 
Sbjct: 438 HQNGTLTWNKFAVAVQAAHEKRMGQPSRRKVIADKPKEEDYFYANPQECLCEGTNCDDLL 497

Query: 302 GYGNLSGIQ 310
           G  N S +Q
Sbjct: 498 GPNNSSSLQ 506




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224108966|ref|XP_002315033.1| predicted protein [Populus trichocarpa] gi|222864073|gb|EEF01204.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224101395|ref|XP_002312261.1| predicted protein [Populus trichocarpa] gi|222852081|gb|EEE89628.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|42562051|ref|NP_172855.2| O-fucosyltransferase family protein [Arabidopsis thaliana] gi|37202038|gb|AAQ89634.1| At1g14020 [Arabidopsis thaliana] gi|110739513|dbj|BAF01665.1| growth regulator like protein [Arabidopsis thaliana] gi|110739824|dbj|BAF01818.1| growth regulator like protein [Arabidopsis thaliana] gi|332190978|gb|AEE29099.1| O-fucosyltransferase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|5080778|gb|AAD39288.1|AC007576_11 Similar to auxin-independent growth promoter protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|8778398|gb|AAF79406.1|AC068197_16 F16A14.24 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225462928|ref|XP_002265858.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis vinifera] gi|296087792|emb|CBI35048.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297844310|ref|XP_002890036.1| hypothetical protein ARALYDRAFT_471563 [Arabidopsis lyrata subsp. lyrata] gi|297335878|gb|EFH66295.1| hypothetical protein ARALYDRAFT_471563 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449478380|ref|XP_004155302.1| PREDICTED: LOW QUALITY PROTEIN: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449434758|ref|XP_004135163.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query319
TAIR|locus:2014869499 AT1G14020 [Arabidopsis thalian 0.959 0.613 0.794 6.2e-133
TAIR|locus:2056981508 AT2G03280 [Arabidopsis thalian 0.905 0.568 0.779 1.3e-121
TAIR|locus:2143181508 AT5G15740 [Arabidopsis thalian 0.905 0.568 0.674 3.1e-106
TAIR|locus:2076552512 AT3G02250 [Arabidopsis thalian 0.905 0.564 0.667 3.6e-105
TAIR|locus:2065563638 AT2G37980 [Arabidopsis thalian 0.905 0.452 0.488 3.2e-72
TAIR|locus:2080285638 AT3G54100 [Arabidopsis thalian 0.905 0.452 0.484 3.3e-70
TAIR|locus:2009467565 AT1G22460 [Arabidopsis thalian 0.915 0.516 0.466 8e-69
TAIR|locus:2157096652 AT5G35570 [Arabidopsis thalian 0.915 0.447 0.466 9.2e-68
TAIR|locus:2174754522 AT5G64600 [Arabidopsis thalian 0.896 0.547 0.467 8.2e-67
TAIR|locus:2150129631 FRB1 "FRIABLE 1" [Arabidopsis 0.890 0.450 0.449 5.4e-63
TAIR|locus:2014869 AT1G14020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1303 (463.7 bits), Expect = 6.2e-133, P = 6.2e-133
 Identities = 243/306 (79%), Positives = 274/306 (89%)

Query:     2 QILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQ 61
             Q+LP FSKHKV+HFNRTDTRLANNG+P  LQ LRCRVNFQGLKFTP++E LG +LVRILQ
Sbjct:   193 QVLPLFSKHKVVHFNRTDTRLANNGLPLSLQWLRCRVNFQGLKFTPQLEALGSKLVRILQ 252

Query:    62 EKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLC 121
             ++GPFVALHLRYEMDMLAFSGCTHGC+  EAEELK++RY YPWWREKEIVSEERR+QGLC
Sbjct:   253 QRGPFVALHLRYEMDMLAFSGCTHGCTEEEAEELKKMRYTYPWWREKEIVSEERRAQGLC 312

Query:   122 PLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQL 181
             PLTPEE ALVL+ALG +K+T IYIAAGEIYG E RL+ LR AFPRIV+KEMLL+ AELQ 
Sbjct:   313 PLTPEEVALVLKALGFEKNTQIYIAAGEIYGSEHRLSVLREAFPRIVKKEMLLESAELQQ 372

Query:   182 FQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKSILLDRKILVGLLDM 241
             FQNHSSQMAALDFMVS AS+ FIPTYDGNMAKVVEGHRRYLG+KK+ILLDRK LV LLD+
Sbjct:   373 FQNHSSQMAALDFMVSVASNTFIPTYDGNMAKVVEGHRRYLGYKKTILLDRKRLVELLDL 432

Query:   242 HHNGTLSFNEFTVAVRLAHEKRMGQPTRRRVIADKPKEEDYFYANPQECFCEGTNCADLP 301
             HHN TL++++F VAV+ AHE+R G PT RRVI+DKPKEEDYFYANPQEC CEGTNC DL 
Sbjct:   433 HHNKTLTWDQFAVAVKEAHERRAGAPTHRRVISDKPKEEDYFYANPQECLCEGTNCHDLF 492

Query:   302 GYGNLS 307
             G+ NL+
Sbjct:   493 GHRNLT 498




GO:0005794 "Golgi apparatus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM
TAIR|locus:2056981 AT2G03280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143181 AT5G15740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076552 AT3G02250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065563 AT2G37980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080285 AT3G54100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009467 AT1G22460 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157096 AT5G35570 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174754 AT5G64600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150129 FRB1 "FRIABLE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.X.1023.1
hypothetical protein (500 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
cd11299290 cd11299, O-FucT_plant, GDP-fucose protein O-fucosy 1e-100
pfam10250315 pfam10250, O-FucT, GDP-fucose protein O-fucosyltra 5e-79
cd11296206 cd11296, O-FucT_like, GDP-fucose protein O-fucosyl 2e-10
>gnl|CDD|211385 cd11299, O-FucT_plant, GDP-fucose protein O-fucosyltransferase, plant specific subfamily Back     alignment and domain information
 Score =  296 bits (761), Expect = e-100
 Identities = 111/227 (48%), Positives = 141/227 (62%), Gaps = 36/227 (15%)

Query: 2   QILPHFSKHKVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQ 61
           ++LP   KH V+     D+RLAN+ +P ++Q+LRCRVNF  L+F P+IE LG +LV  L+
Sbjct: 99  EVLPLLKKHGVIRLAPFDSRLANDLLPPEIQRLRCRVNFHALRFVPEIEELGDKLVDRLR 158

Query: 62  EK-GPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGL 120
           E  GPF+ALHLR+E DMLAFSGC                                   G 
Sbjct: 159 EAGGPFLALHLRFEKDMLAFSGC-----------------------------------GK 183

Query: 121 CPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQ 180
           CPLTPEE  L+L+ALG  + T IY+AAGEIYGGE+RL  LR+ FP +  KE L    EL 
Sbjct: 184 CPLTPEEVGLLLRALGFPRSTRIYLAAGEIYGGERRLDPLRSIFPNLYTKETLATAEELA 243

Query: 181 LFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFKKS 227
            F  HSS++AALD++V   SD+F+PTY GN AK V GHRRYLG +K+
Sbjct: 244 PFSGHSSRLAALDYIVCLESDVFVPTYGGNFAKAVAGHRRYLGHRKT 290


Some members of this plant-specific family of O-fucosyltransferases have been annotated as auxin-independent growth promotors. The function of the protein seems unclear. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. Length = 290

>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase Back     alignment and domain information
>gnl|CDD|211383 cd11296, O-FucT_like, GDP-fucose protein O-fucosyltransferase and related proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 319
PF10250351 O-FucT: GDP-fucose protein O-fucosyltransferase; I 100.0
PF05830321 NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 95.67
KOG3849386 consensus GDP-fucose protein O-fucosyltransferase 93.97
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats Back     alignment and domain information
Probab=100.00  E-value=1e-39  Score=307.66  Aligned_cols=204  Identities=38%  Similarity=0.670  Sum_probs=143.9

Q ss_pred             cccccccC------ceEEEccCCcccccCCCCchhhhhhhhhcccccccchhHHHHHHHHHHHHH-hcCCeeEeeccchh
Q 020957            3 ILPHFSKH------KVLHFNRTDTRLANNGIPFDLQKLRCRVNFQGLKFTPKIETLGYELVRILQ-EKGPFVALHLRYEM   75 (319)
Q Consensus         3 ilP~l~k~------~Vi~l~~~~~RLa~~~lp~~iQrLRCrvnf~ALrF~p~I~~lg~~lv~Rlr-~~GpyiAlHLR~E~   75 (319)
                      ++|++.++      +|+.|.++..++..+..+.++||        +|+|+++|+++|+++++++. ..+||||+|||+|+
T Consensus       135 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~r--------~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~  206 (351)
T PF10250_consen  135 VLPELREWNENSEHPVIAFTGFESRLPDNYLDRDLQR--------YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGK  206 (351)
T ss_dssp             STTHHHHHHHHTT-SEEEESS-SS-SS--GGGGGGGG--------G--B-HHHHHHHHHHHHHH----SSEEEEEE--SH
T ss_pred             hhhHHhhhccccccccceeccccccchhcccCccceE--------EEecCHHHHHHHHHHHHHhhcccCceEEEeecccC
Confidence            56777765      99999999999999889999988        99999999999999999999 78899999999999


Q ss_pred             hHHHhhcCCCCCChhHHHHHHHHHhcCcccccccCChHHHhhCCCCCCCHHHHHHHHHHcCCCCCceEEEeeccccCCcc
Q 020957           76 DMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERRSQGLCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEK  155 (319)
Q Consensus        76 DMlAfsgC~~g~~~~e~~el~~~R~~~~~w~~k~i~~~~~R~~G~CPLtPeEvgl~LralGf~~~T~IYlA~geiygg~~  155 (319)
                      ||  +++|.+++   +...|+.+|.    |..+.+++...+..+.||++|++++.+++++|+.+.|.||||++++|||.+
T Consensus       207 D~--~~~C~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~  277 (351)
T PF10250_consen  207 DW--FSACEFKG---ERHLLASPRC----WGKKSINPEKKRRNGCCPSTPQEAKQILRALGKNNTTVVYIATDEIYGGER  277 (351)
T ss_dssp             HH--HHHHCT-T-------TTTHHH----H-GGGTT-----HHHHS--HHHHHHHHHHHHHHHT-SEEEEEESS------
T ss_pred             ch--HhhcccCC---chHHHHHhHh----hccccccchhhhhcCCCCChHHHHHHHHHHhccCCCCEEEEecCcccccch
Confidence            99  99999955   6677777775    356677888899999999999999999999999999999999999999999


Q ss_pred             chHHHHHhCCcccccccCCCHHhhhhhhcccchhhhhHhhhhcCCceeeecCCCchhhhhhhhhcccCCc
Q 020957          156 RLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTASDIFIPTYDGNMAKVVEGHRRYLGFK  225 (319)
Q Consensus       156 ~l~~L~~~fPnl~tKe~L~~~eEL~~f~~~ss~~AALDYiVcl~SDvFv~t~~GNfa~~v~GhR~y~G~~  225 (319)
                      .|++|++.||++++|+++.+.+|+++|..  +++|+||++||++||+||+|..++|+.+|+++|.|.|+.
T Consensus       278 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~a~vD~~i~~~s~~Figt~~Stfs~~i~~~R~~~g~~  345 (351)
T PF10250_consen  278 RLDPLKNMFPNVVTKDDLLSHEELEPLND--DQLAMVDQEICSRSDVFIGTCGSTFSSNIARERHYRGKP  345 (351)
T ss_dssp             -----HHHHHHHHGGGT--EE--S-------S--HHHHHHHHHHSSEEEE-TT-HHHHHHHHHHHHSSSS
T ss_pred             hHHHHHHHhhhhEeccccCCHHHhhhccc--cchhHHHHHHHhcCCEEEecCcchhHHHhhcccCcCCCC
Confidence            99999999999999999999999999866  999999999999999999999888999999999999965



Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.

>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation Back     alignment and domain information
>KOG3849 consensus GDP-fucose protein O-fucosyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query319
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 56/340 (16%), Positives = 100/340 (29%), Gaps = 129/340 (37%)

Query: 16  NRTDTRLANNGIPFDLQKLRCRV--NFQGLKFTPK-----IETLGYELVRILQEKGPFVA 68
           N  +T L        LQKL  ++  N+             I ++  EL R+L+ K     
Sbjct: 193 NSPETVLEM------LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK----- 241

Query: 69  LHLRYEMDML------------AFSGCTHGCSM-------GEAEELKRLRYAYPWWREKE 109
               YE  +L            AF+     C +          + L              
Sbjct: 242 ---PYENCLLVLLNVQNAKAWNAFN---LSCKILLTTRFKQVTDFLSAATT-------TH 288

Query: 110 IVSEERRSQGLCPLTPEEA-ALVLQALGIDKDT-----------HIYIAAGEIYGGEKRL 157
           I  +         LTP+E  +L+L+ L                  + I A  I  G    
Sbjct: 289 ISLDHHSM----TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344

Query: 158 AALR----AAFPRIVRKEM-LLDPAELQ-LFQNHSSQMAALDFMVSTASDIFIPT----- 206
              +         I+   + +L+PAE + +F     +++             IPT     
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD----RLSVFP------PSAHIPTILLSL 394

Query: 207 ------YDGNMAKVVEGHRRYLGFKKSILLDR---KILVGLLDMHHNGTLSFNEFTVAVR 257
                     M  V + H      K S L+++   +  + +  ++           + V+
Sbjct: 395 IWFDVIKSDVMVVVNKLH------KYS-LVEKQPKESTISIPSIY---------LELKVK 438

Query: 258 LAHEKRMGQPTRRRVIA-------------DKPKEEDYFY 284
           L +E  +     R ++                P  + YFY
Sbjct: 439 LENEYAL----HRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query319
4ap5_A408 GDP-fucose protein O-fucosyltransferase 2; GT-B, G 98.84
3zy2_A362 Putative GDP-fucose protein O-fucosyltransferase; 98.62
2de0_X526 Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran 97.24
2hhc_A330 NODZ, nodulation fucosyltransferase NODZ; glycosyl 96.15
>4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* Back     alignment and structure
Probab=98.84  E-value=4.1e-09  Score=101.96  Aligned_cols=166  Identities=17%  Similarity=0.227  Sum_probs=104.5

Q ss_pred             cccccchhHHHHHHHHHHHHHhcCCeeEeeccchhhHHHhhcCCCCCChhHHHHHHHHHhcCcccccccCChHHHh-hCC
Q 020957           41 QGLKFTPKIETLGYELVRILQEKGPFVALHLRYEMDMLAFSGCTHGCSMGEAEELKRLRYAYPWWREKEIVSEERR-SQG  119 (319)
Q Consensus        41 ~ALrF~p~I~~lg~~lv~Rlr~~GpyiAlHLR~E~DMlAfsgC~~g~~~~e~~el~~~R~~~~~w~~k~i~~~~~R-~~G  119 (319)
                      ..|+|++.|.+.|++.++..- +++|+++|+|...|+...  |.......-.      -+.--||+....    .. ...
T Consensus       217 r~l~~s~~l~~~a~~fi~~~L-~~~~~~~h~r~~~dw~~~--~~~~~~~~~~------~y~~~H~Rr~d~----~~~~~~  283 (408)
T 4ap5_A          217 RSMVFARHLREVGDEFRSRHL-NSTDDADRIPFQEDWMKM--KVKLGSALGG------PYLGVHLRRKDF----IWGHRQ  283 (408)
T ss_dssp             HTCCBCHHHHHHHHHHHHHHH-CCCTTTTTCCCCSSGGGC--CCCTTCBCCE------EEEEEEECCTTT----TTTTCS
T ss_pred             HHhhhhHHHHHHHHHHHHHHh-CcccceeecccchhHhhh--hcccccccCC------Cccccccccccc----hhhhhc
Confidence            479999999999999988765 368888888888777653  4321110000      000012221100    00 112


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEEeeccccCCccchHHHHHhCCcccccccCCCHHhhhhhhcccchhhhhHhhhhcC
Q 020957          120 LCPLTPEEAALVLQALGIDKDTHIYIAAGEIYGGEKRLAALRAAFPRIVRKEMLLDPAELQLFQNHSSQMAALDFMVSTA  199 (319)
Q Consensus       120 ~CPLtPeEvgl~LralGf~~~T~IYlA~geiygg~~~l~~L~~~fPnl~tKe~L~~~eEL~~f~~~ss~~AALDYiVcl~  199 (319)
                      .+|-.+.-+..+.+.+-=-+-+.||||+-+.   +..+..|++.+|.++.-..  ..+++..+  .....|.||-.||.+
T Consensus       284 ~~ps~~~~~~~i~~~~~~~~~~~VyiATD~~---~~~~~~l~~~~~~~~~~~~--~~~~~~~~--~d~~~a~idq~Ic~~  356 (408)
T 4ap5_A          284 DVPSLEGAVRKIRSLMKTHRLDKVFVATDAV---RKEYEELKKLLPEMVRFEP--TWEELELY--KDGGVAIIDQWICAH  356 (408)
T ss_dssp             SSCCHHHHHHHHHHHHHHHTCSCEEEEECCC---HHHHHHHHHHCTTEECCCC--CHHHHHHH--HHHHHHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHhcCCCEEEEeCCCc---hhHHHHHHHhCCCcEEecC--cchhhhcc--CcchhhHHHHHHHHh
Confidence            2333333322232222212335699998653   4557889999998764332  34555544  235689999999999


Q ss_pred             CceeeecCCCchhhhhhhhhcccCCcc
Q 020957          200 SDIFIPTYDGNMAKVVEGHRRYLGFKK  226 (319)
Q Consensus       200 SDvFv~t~~GNfa~~v~GhR~y~G~~k  226 (319)
                      ||+||+|..++|+..|.-.|.+.|+..
T Consensus       357 a~~FiGt~~StfS~~I~~eR~~~G~~~  383 (408)
T 4ap5_A          357 ARFFIGTSVSTFSFRIHEEREILGLDP  383 (408)
T ss_dssp             EEEEEBCTTCHHHHHHHHHHHHHTBCG
T ss_pred             CCeeEeCCcCchhHHHHHHHHhcCCCC
Confidence            999999999999999999999999763



>3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* Back     alignment and structure
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Back     alignment and structure
>2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00