Query 020960
Match_columns 319
No_of_seqs 157 out of 1300
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 10:43:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.9 6.3E-23 2.2E-27 169.4 16.4 126 2-144 8-133 (136)
2 2dmh_A Myoferlin; beta-sandwic 99.9 3.5E-22 1.2E-26 165.7 17.4 128 2-144 5-136 (140)
3 3b7y_A E3 ubiquitin-protein li 99.9 5.8E-22 2E-26 167.0 15.2 129 3-141 19-153 (153)
4 1gmi_A Protein kinase C, epsil 99.9 2.4E-22 8.2E-27 167.0 11.7 121 1-142 3-134 (136)
5 3m7f_B E3 ubiquitin-protein li 99.9 1.1E-21 3.8E-26 169.9 15.7 131 2-142 6-142 (176)
6 2nq3_A Itchy homolog E3 ubiqui 99.9 2E-21 6.7E-26 170.0 16.9 136 2-151 34-170 (173)
7 2ep6_A MCTP2 protein; beta san 99.9 4.7E-22 1.6E-26 164.2 12.1 120 2-140 11-131 (133)
8 3pyc_A E3 ubiquitin-protein li 99.9 4.9E-21 1.7E-25 157.9 16.1 122 2-139 3-131 (132)
9 3kwu_A MUNC13-1; calcium bindi 99.9 9.2E-21 3.1E-25 158.8 17.0 120 2-140 15-146 (148)
10 2fk9_A Protein kinase C, ETA t 99.9 3.2E-21 1.1E-25 167.3 13.2 120 2-140 27-156 (157)
11 1rlw_A Phospholipase A2, CALB 99.8 1.4E-20 4.7E-25 153.2 12.3 118 3-140 2-124 (126)
12 2cjt_A UNC-13 homolog A, MUNC1 99.8 1.9E-20 6.5E-25 156.5 12.6 123 1-140 2-131 (131)
13 1v27_A Regulating synaptic mem 99.8 7.1E-20 2.4E-24 151.4 10.0 115 3-131 20-141 (141)
14 1a25_A CALB, protein kinase C 99.8 1.5E-19 5E-24 152.1 11.7 106 3-123 30-139 (149)
15 3rdl_A Protein kinase C alpha 99.8 2E-19 6.9E-24 148.0 11.1 106 3-123 15-124 (137)
16 2b3r_A Phosphatidylinositol-4- 99.8 1.9E-19 6.7E-24 149.7 10.9 107 3-123 19-130 (134)
17 2d8k_A Synaptotagmin VII; exoc 99.8 1.8E-19 6E-24 150.1 10.5 108 3-123 25-135 (141)
18 1ugk_A Synaptotagmin IV, KIAA1 99.8 5.8E-19 2E-23 146.4 13.5 98 3-102 21-122 (138)
19 3f04_A Synaptotagmin-1; C2A, c 99.8 2E-19 6.7E-24 149.9 9.6 107 3-122 33-141 (143)
20 1rsy_A Synaptotagmin I; calciu 99.8 4E-19 1.4E-23 150.1 10.7 108 3-123 41-150 (152)
21 2cjs_A UNC-13 homolog A, MUNC1 99.8 2.2E-18 7.5E-23 150.2 15.2 122 3-141 13-141 (167)
22 3fdw_A Synaptotagmin-like prot 99.8 7E-19 2.4E-23 147.8 11.6 108 3-123 22-134 (148)
23 2bwq_A Regulating synaptic mem 99.8 1E-18 3.5E-23 142.6 11.9 97 3-101 17-120 (129)
24 2dmg_A KIAA1228 protein; beta- 99.8 4.4E-19 1.5E-23 147.6 9.9 107 3-123 23-135 (142)
25 1rh8_A Piccolo protein; beta-s 99.8 1.6E-19 5.4E-24 150.0 6.6 108 3-123 17-138 (142)
26 2enp_A B/K protein; C2 type 1, 99.8 2.9E-19 1E-23 149.7 8.1 97 3-101 25-130 (147)
27 2z0u_A WW domain-containing pr 99.8 2.4E-19 8.3E-24 153.9 7.5 96 3-100 42-142 (155)
28 1wfm_A Synaptotagmin XIII; C2 99.8 1.1E-18 3.8E-23 145.6 11.3 105 3-123 25-132 (138)
29 2r83_A Synaptotagmin-1; C2A-C2 99.8 2.9E-18 9.9E-23 157.4 15.0 127 2-141 17-147 (284)
30 2chd_A Rabphilin-3A, exophilin 99.8 1E-18 3.5E-23 145.4 10.7 98 3-102 28-130 (142)
31 3n5a_A Synaptotagmin-7; calciu 99.8 2.4E-18 8.1E-23 141.5 12.0 96 3-100 15-114 (138)
32 3l9b_A Otoferlin; C2-domain, b 99.8 6.3E-18 2.2E-22 145.2 14.3 121 4-142 21-141 (144)
33 3fbk_A RGS3, RGP3, regulator o 99.8 4.6E-18 1.6E-22 144.0 13.3 112 2-127 25-141 (153)
34 1tjx_A Similar to synaptotagmi 99.8 5.1E-18 1.7E-22 144.1 13.0 94 3-98 24-121 (159)
35 1w15_A Synaptotagmin IV; metal 99.8 4.9E-18 1.7E-22 143.1 12.7 93 3-97 29-125 (153)
36 2q3x_A Regulating synaptic mem 99.8 3E-18 1E-22 148.3 10.8 105 3-123 29-139 (171)
37 2cm5_A Rabphilin-3A; protein t 99.7 8E-18 2.8E-22 144.1 12.6 95 3-99 36-134 (166)
38 1dqv_A Synaptotagmin III; beta 99.7 2.2E-17 7.5E-22 153.8 15.1 128 2-141 18-149 (296)
39 3jzy_A Intersectin 2; C2 domai 99.7 2.1E-16 7.2E-21 156.2 15.5 122 3-140 386-507 (510)
40 1djx_A PLC-D1, phosphoinositid 99.7 4.6E-16 1.6E-20 160.5 17.0 120 3-140 496-623 (624)
41 3nsj_A Perforin-1; pore formin 99.6 2.8E-15 9.6E-20 152.5 13.3 111 3-140 393-503 (540)
42 2r83_A Synaptotagmin-1; C2A-C2 99.6 3.8E-15 1.3E-19 136.6 12.5 94 3-98 149-246 (284)
43 1cjy_A CPLA2, protein (cytosol 99.5 1.4E-14 4.8E-19 152.2 11.0 95 3-102 17-116 (749)
44 1dqv_A Synaptotagmin III; beta 99.5 3.3E-15 1.1E-19 139.0 5.3 96 3-100 151-250 (296)
45 3bxj_A RAS GTPase-activating p 99.5 5.4E-16 1.9E-20 155.1 -1.0 120 3-142 10-158 (483)
46 3ohm_B 1-phosphatidylinositol- 99.5 2.9E-13 9.9E-18 144.4 13.5 113 3-141 724-845 (885)
47 3qr0_A Phospholipase C-beta (P 99.4 5.8E-13 2E-17 141.2 14.5 113 3-141 649-771 (816)
48 2zkm_X 1-phosphatidylinositol- 99.4 8.2E-13 2.8E-17 139.8 14.9 112 3-140 677-798 (799)
49 3pfq_A PKC-B, PKC-beta, protei 99.4 9.3E-13 3.2E-17 135.9 11.5 97 3-102 171-271 (674)
50 1yrk_A NPKC-delta, protein kin 99.2 4.4E-10 1.5E-14 94.3 13.5 117 3-140 5-124 (126)
51 2enj_A NPKC-theta, protein kin 99.1 6.3E-10 2.2E-14 94.6 10.4 118 3-142 9-131 (138)
52 2yrb_A Protein fantom; beta sa 96.9 0.0041 1.4E-07 53.8 9.4 128 3-145 17-154 (156)
53 3l4c_A Dedicator of cytokinesi 95.5 0.27 9.3E-06 44.6 13.5 60 37-97 77-139 (220)
54 3hhm_A Phosphatidylinositol-4, 92.9 1.6 5.6E-05 47.8 15.1 94 3-99 354-456 (1091)
55 2wxf_A Phosphatidylinositol-4, 91.5 0.63 2.2E-05 50.3 9.7 73 3-79 216-294 (940)
56 2y3a_A Phosphatidylinositol-4, 83.1 1 3.4E-05 49.4 4.9 73 3-79 352-430 (1092)
57 1e7u_A Phosphatidylinositol 3- 83.0 3.1 0.00011 45.0 8.6 74 4-79 218-296 (961)
58 2qzq_A Axin interactor, dorsal 71.4 9.8 0.00034 32.5 6.7 95 4-101 14-116 (152)
59 3heq_A Major prion protein; ce 29.6 18 0.00062 30.2 1.2 26 274-300 21-48 (142)
60 1wa7_B TIP, hypothetical 28.7 29.1 41 0.0014 20.2 2.4 13 231-243 5-18 (26)
61 1dx0_A Prion protein; brain, r 28.4 19 0.00064 32.4 1.2 11 285-296 113-123 (219)
62 1tpx_A Prion protein, major pr 26.4 22 0.00076 29.2 1.2 25 277-302 3-29 (121)
63 2lbg_A Major prion protein; co 25.0 12 0.0004 23.0 -0.5 10 282-291 4-13 (27)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.90 E-value=6.3e-23 Score=169.43 Aligned_cols=126 Identities=19% Similarity=0.265 Sum_probs=108.2
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCCC
Q 020960 2 GKIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREPI 81 (319)
Q Consensus 2 ~~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~~ 81 (319)
..+.|+|+|++|++|+..+..++.||||++++.+ .++||+++++++.||+|||+|.|.+.+. ...|+|+|||++.
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~kT~~~~~~~~nP~Wne~f~f~v~~~---~~~l~~~V~d~~~- 82 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-QDQKSNVAEGMGTTPEWNETFIFTVSEG---TTELKAKIFDKDV- 82 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS-CEEECCCCTTCCSSCEEEEEEEEEEESS---CCEEEEEECCSSS-
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECC-ccceeEeccCCCCCCccCcEEEEEECCC---CCEEEEEEEECCC-
Confidence 4689999999999999998888999999999975 4779999885699999999999999863 5789999999987
Q ss_pred CCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccceEEEEEEEEeecCC
Q 020960 82 FLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQGFIDVSVCISEERE 144 (319)
Q Consensus 82 ~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G~L~lsL~f~~~~~ 144 (319)
+.+|++||++.|+|.+|..... ....||.|.+ +++.+|+|+|+|+|.+..+
T Consensus 83 ~~~d~~lG~~~i~l~~l~~~~~----------~~~~w~~L~~--~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 83 GTEDDAVGEATIPLEPVFVEGS----------IPPTAYNVVK--DEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp CTTTCCSEEEEEESHHHHHHSE----------EEEEEEEEEE--TTEEEEEEEEEEEEEECCS
T ss_pred CCCCceEEEEEEEHHHhccCCC----------CCcEEEEeec--CCccCEEEEEEEEEEeCCC
Confidence 6789999999999999965431 1245899984 7789999999999998754
No 2
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89 E-value=3.5e-22 Score=165.74 Aligned_cols=128 Identities=21% Similarity=0.220 Sum_probs=105.0
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCC-CcceEEEEEEecCC
Q 020960 2 GKIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNF-QDAALHVEVYSREP 80 (319)
Q Consensus 2 ~~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~l-q~~~L~VeV~d~~~ 80 (319)
..+.|+|+|++|++|+..+. ++.||||++++.+ +++||+++++ +.||+|||+|.|.+....+ ....|+|+|||++.
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~-~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~ 81 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKD-EKKKTKKVDN-ELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET 81 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSS-CEEECCCCCS-CSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECC-EeEEeeeecC-CCCCccCcEEEEEecccccCCCCEEEEEEEECCC
Confidence 35789999999999999888 8999999999974 5799999875 8999999999999975322 25889999999997
Q ss_pred CCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEE---eEeCCCCccceEEEEEEEEeecCC
Q 020960 81 IFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQ---LRKKNSNKPQGFIDVSVCISEERE 144 (319)
Q Consensus 81 ~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~---Lrr~~sgKp~G~L~lsL~f~~~~~ 144 (319)
+.+|++||++.|+|.+|..+... ..|+. |+.....+.+|+|+|+|+|.+...
T Consensus 82 -~~~~~~lG~~~i~l~~l~~~~~~-----------~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 82 -IGQNKLIGTATVALKDLTGDQSR-----------SLPYKLISLLNEKGQDTGATIDLVIGYDPPSG 136 (140)
T ss_dssp -SSSCCCCEEEEEEGGGTCSSSCE-----------EEEEEEEEEECTTCCEEEEEEEEEEEECCCBS
T ss_pred -CCCCceEEEEEEEHHHhccCCCc-----------eeEEeeeeccCCCCCCCCCEEEEEEEEECCCC
Confidence 67899999999999999765321 23555 765344467899999999998533
No 3
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.88 E-value=5.8e-22 Score=166.98 Aligned_cols=129 Identities=16% Similarity=0.228 Sum_probs=99.6
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCC-----CeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEe
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPN-----NKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYS 77 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~-----~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d 77 (319)
.+.|+|+|++|++|+..+..++.||||++++.+. .++||+++++ +.||+|||+|.|.+... ...|+|+|||
T Consensus 19 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~---~~~l~~~V~d 94 (153)
T 3b7y_A 19 SRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKK-SLNPKWNEEILFRVHPQ---QHRLLFEVFD 94 (153)
T ss_dssp CEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSS-CSSCCCCEEEEEEECTT---TCEEEEEEEE
T ss_pred ccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccC-CCCCCCCCEEEEEecCC---CCEEEEEEEE
Confidence 5789999999999999888889999999999642 5789999886 89999999999999864 4789999999
Q ss_pred cCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeC-CCCccceEEEEEEEEee
Q 020960 78 REPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKK-NSNKPQGFIDVSVCISE 141 (319)
Q Consensus 78 ~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~-~sgKp~G~L~lsL~f~~ 141 (319)
++. +.+|++||++.|+|.+|..+..... ......||.|..+ ++++.+|+|+|+|+|.+
T Consensus 95 ~d~-~~~d~~iG~~~i~l~~l~~~~~~~~-----~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 95 ENR-LTRDDFLGQVDVPLYPLPTENPRLE-----RPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp CCS-SSCCEEEEEEEEECCSCCBCCTTSC-----CCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CCC-CcCCCeeEEEEEEHHHcccCCCccc-----ccccccccccccccCCCCcceEEEEEEEEeC
Confidence 987 6789999999999999987653210 0111358888753 24577999999999975
No 4
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.88 E-value=2.4e-22 Score=167.04 Aligned_cols=121 Identities=17% Similarity=0.254 Sum_probs=100.1
Q ss_pred CCceEEEEEEEEecCCCCCCCCCC-----------CCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcc
Q 020960 1 MGKIWVEVCLISARGLRRSSSLWK-----------LQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDA 69 (319)
Q Consensus 1 M~~~~LeVtViSAr~Lk~~d~~gk-----------~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~ 69 (319)
|..+.|+|+|++|++|+..+.+++ +||||+++++.....+|+++++ +.||+|||+|.|.+.+. .
T Consensus 3 ~~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~-t~nP~WnE~f~f~v~~~----~ 77 (136)
T 1gmi_A 3 VFNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQK-TNSPAWHDEFVTDVCNG----R 77 (136)
T ss_dssp CEEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEEE----C
T ss_pred ccceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECC-CcCCccCCEEEEEecCC----C
Confidence 346899999999999998765444 8999999997666679998764 89999999999999763 7
Q ss_pred eEEEEEEecCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccceEEEEEEEEeec
Q 020960 70 ALHVEVYSREPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQGFIDVSVCISEE 142 (319)
Q Consensus 70 ~L~VeV~d~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G~L~lsL~f~~~ 142 (319)
.|.|+|||++. +.+|++||++.|+|.++..+... ....|+.|. ++|+|+|.|+|...
T Consensus 78 ~L~~~V~d~d~-~~~dd~iG~~~i~l~~l~~~~~~---------~~~~w~~L~------~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 78 KIELAVFHDAP-IGYDDFVANCTIQFEELLQNGSR---------HFEDWIDLE------PEGKVYVIIDLSGS 134 (136)
T ss_dssp EEEEEEEECCS-SSSCEEEEEEEEEHHHHTSTTCS---------EEEEEEECB------SSCEEEEEEEEEEE
T ss_pred EEEEEEEeCCC-CCCCCEEEEEEEEHHHhcccCCC---------CccEEEEcC------CCeEEEEEEEEEec
Confidence 89999999987 68899999999999999875321 113477775 47999999999864
No 5
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.87 E-value=1.1e-21 Score=169.87 Aligned_cols=131 Identities=15% Similarity=0.209 Sum_probs=100.2
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCC-----CeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEE
Q 020960 2 GKIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPN-----NKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVY 76 (319)
Q Consensus 2 ~~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~-----~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~ 76 (319)
..+.|+|+|++|++|+..+..+++||||+|++.+. .++||+++++ +.||+|||+|.|.|... ...|.|+||
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~-t~nP~Wne~f~f~v~~~---~~~L~~~V~ 81 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKK-SLNPKWNEEILFRVLPQ---RHRILFEVF 81 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSS-CSSCEEEEEEEEEECTT---TCEEEEEEE
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECC-CCCCcccceEEEEEcCC---CCEEEEEEE
Confidence 46899999999999999888899999999999642 4689999885 99999999999999864 478999999
Q ss_pred ecCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeC-CCCccceEEEEEEEEeec
Q 020960 77 SREPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKK-NSNKPQGFIDVSVCISEE 142 (319)
Q Consensus 77 d~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~-~sgKp~G~L~lsL~f~~~ 142 (319)
|++. +.+|++||++.|+|.+|........ ......||.|..+ ..++.+|+|+|+|+|.+.
T Consensus 82 d~d~-~~~d~~lG~~~i~l~~l~~~~~~~~-----~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 82 DENR-LTRDDFLGQVDVPLYPLPTENPRME-----RPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp ECC-----CEEEEEEEEESCSCCBC-----------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred ECCC-CCCCcEEEEEEEEHHHccccCCccc-----ccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 9987 6799999999999999987643210 0112258888753 346679999999999987
No 6
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.87 E-value=2e-21 Score=169.99 Aligned_cols=136 Identities=20% Similarity=0.222 Sum_probs=104.3
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCCC
Q 020960 2 GKIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREPI 81 (319)
Q Consensus 2 ~~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~~ 81 (319)
..+.|+|+|++|++|+..+..++.||||+|++++ .++||+++++ ++||+|||+|.|.|.. ...|.|+|||++.
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~-~~~kT~v~~~-tlnP~Wne~f~f~v~~----~~~L~~~V~D~d~- 106 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG-QSKKTEKCNN-TNSPKWKQPLTVIVTP----VSKLHFRVWSHQT- 106 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT-EEEECCCCSS-CSSCEEEEEEEEEECT----TCEEEEEEEECCS-
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECC-EEeEccccCC-CCCCeECCEEEEEeCC----CCEEEEEEEECCC-
Confidence 4578999999999999555555699999999976 7899999884 8999999999999964 4789999999997
Q ss_pred CCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCC-CCccceEEEEEEEEeecCCCCCCCCC
Q 020960 82 FLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKN-SNKPQGFIDVSVCISEEREEPSSYPG 151 (319)
Q Consensus 82 ~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~-sgKp~G~L~lsL~f~~~~~~~~~~~G 151 (319)
+.+|++||++.|+|.+|....... ......|++|.+++ +.+.+|+|.|.|.+... +.....+|
T Consensus 107 ~~~dd~lG~~~i~l~~l~~~~~~~------~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~-~~~~~~~~ 170 (173)
T 2nq3_A 107 LKSDVLLGTAALDIYETLKSNNMK------LEEVVVTLQLGGDKEPTETIGDLSICLDGLQL-ESEVVTNG 170 (173)
T ss_dssp SSCCEEEEEEEEEHHHHHHHTTTE------ESSEEEEEEEEESSCTTSEEEEEEEEEESEEC-C-------
T ss_pred CCCCceEEEEEEEHHHhcccCCCC------cceeEEEEECccCCCCCcccEEEEEEEeeeec-chhhcCCC
Confidence 679999999999999998764321 11124589998732 34679999999999866 44444444
No 7
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.87 E-value=4.7e-22 Score=164.16 Aligned_cols=120 Identities=19% Similarity=0.218 Sum_probs=102.6
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCCC
Q 020960 2 GKIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREPI 81 (319)
Q Consensus 2 ~~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~~ 81 (319)
..+.|+|+|++|++|+..+..+++||||++++.+ .++||+++++ +.||+|||+|.|.+.+. ...|+|+|||++.
T Consensus 11 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~kT~~~~~-t~nP~wne~f~f~~~~~---~~~l~i~V~d~d~- 84 (133)
T 2ep6_A 11 DVGILQVKVLKAADLLAADFSGKSDPFCLLELGN-DRLQTHTVYK-NLNPEWNKVFTFPIKDI---HDVLEVTVFDEDG- 84 (133)
T ss_dssp CSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT-EEEECCCCSS-CSSCCCCEEEEEEESCT---TCEEEEEEEEEET-
T ss_pred CceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC-EEEEeeeecC-CCCCccccEEEEEecCC---CCEEEEEEEECCC-
Confidence 4689999999999999998888999999999965 5789999886 89999999999999864 4789999999987
Q ss_pred CCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCC-CCccceEEEEEEEEe
Q 020960 82 FLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKN-SNKPQGFIDVSVCIS 140 (319)
Q Consensus 82 ~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~-sgKp~G~L~lsL~f~ 140 (319)
+.+|++||++.|+|.++..+. ..||.|..+. .++.+|+|+|.|+|.
T Consensus 85 ~~~~~~lG~~~i~l~~l~~~~-------------~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 85 DKPPDFLGKVAIPLLSIRDGQ-------------PNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp TEEEEECCBCEEEGGGCCSSC-------------CEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred CCCCCeeEEEEEEHHHccCCC-------------ceEEEeecCCCCCccceEEEEEEEEE
Confidence 578999999999999996532 2488887532 346899999999985
No 8
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.86 E-value=4.9e-21 Score=157.86 Aligned_cols=122 Identities=16% Similarity=0.223 Sum_probs=99.8
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC-CCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCC
Q 020960 2 GKIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP-NNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREP 80 (319)
Q Consensus 2 ~~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~-~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~ 80 (319)
+...|+|+|++|++|+..+..+++||||++++++ ..++||+++++ ++||+|||+|.|.+... ..|.|+|||++.
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~----~~l~~~v~d~d~ 77 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKN-TLDPKWNQHYDLYVGKT----DSITISVWNHKK 77 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSS-CSSCEEEEEEEEEEETT----CCEEEEEEEGGG
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCC-CCCCCccCEEEEEeCCC----CEEEEEEEECCC
Confidence 5678999999999999998889999999999975 57899999875 99999999999999764 459999999986
Q ss_pred CCCC---CceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCC---CCccceEEEEEEEE
Q 020960 81 IFLR---ERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKN---SNKPQGFIDVSVCI 139 (319)
Q Consensus 81 ~~~k---DklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~---sgKp~G~L~lsL~f 139 (319)
+.+ |++||++.|+|.+|....... ..+++|.++. ..+.+|+|+|+|+.
T Consensus 78 -~~~~~~d~~lG~~~i~l~~l~~~~~~~----------~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 78 -IHKKQGAGFLGCVRLLSNAISRLKDTG----------YQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp -TTSSTTTTEEEEEEECHHHHHHHTTSC----------CEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred -CCCCCCCCceEEEEEeHHHhhcccccC----------cEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 455 899999999999996543221 2367887531 22458999999875
No 9
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.86 E-value=9.2e-21 Score=158.80 Aligned_cols=120 Identities=18% Similarity=0.276 Sum_probs=101.1
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCCC
Q 020960 2 GKIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREPI 81 (319)
Q Consensus 2 ~~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~~ 81 (319)
..+.|+|+|++|++|+..+..++.||||++.++ ..+++|+++++ +.||+|||+|.|.+... ...|.|+|||++.
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~-~~~~kT~~~~~-t~nP~Wne~f~f~v~~~---~~~l~~~v~d~d~- 88 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVG-KTKKRTKTIYG-NLNPVWEENFHFECHNS---SDRIKVRVLDEDD- 88 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-TEEEECCCCCS-CSSCEEEEEEEEEECST---TCEEEEEEEECCC-
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEEC-CEEEECCccCC-CCCCCcccEEEEEecCC---CCEEEEEEEECCC-
Confidence 468999999999999998888999999999995 57889999875 89999999999999765 4789999999986
Q ss_pred C-----------CCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeC-CCCccceEEEEEEEEe
Q 020960 82 F-----------LRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKK-NSNKPQGFIDVSVCIS 140 (319)
Q Consensus 82 ~-----------~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~-~sgKp~G~L~lsL~f~ 140 (319)
+ .+|++||++.|+|.++... ...||.|..+ ..++.+|+|+|+|+|.
T Consensus 89 ~~~~~~~~~~~~~~~~~lG~~~i~l~~l~~~-------------~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 89 DIKSRVKQRFKRESDDFLGQTIIEVRTLSGE-------------MDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp SHHHHHHTTTSSCSSEEEEEEEEEGGGCCSE-------------EEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred CccccccccccCCCCccEEEEEEEHHHCcCC-------------CCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 3 6899999999999999322 1348888752 2345789999999985
No 10
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.86 E-value=3.2e-21 Score=167.26 Aligned_cols=120 Identities=19% Similarity=0.251 Sum_probs=98.2
Q ss_pred CceEEEEEEEEecCCCCCCCC----------CCCCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceE
Q 020960 2 GKIWVEVCLISARGLRRSSSL----------WKLQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAAL 71 (319)
Q Consensus 2 ~~~~LeVtViSAr~Lk~~d~~----------gk~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L 71 (319)
..+.|+|+|++|++|+..+.. +.+||||++.+++..+.||+++++ ++||+|||+|.|.|.+. ..|
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~k-tlnP~WNE~F~f~v~~~----~~L 101 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQK-TNKPTYNEEFCANVTDG----GHL 101 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSS-CSSCEEEEEEEEEEEEE----CEE
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCC-CCCCccCcEEEEEcCCC----CEE
Confidence 357899999999999987622 468999999997666679999775 99999999999999753 689
Q ss_pred EEEEEecCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccceEEEEEEEEe
Q 020960 72 HVEVYSREPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQGFIDVSVCIS 140 (319)
Q Consensus 72 ~VeV~d~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G~L~lsL~f~ 140 (319)
.|+|||++. +.+|++||++.|+|++|..+.... .....||.|. ++|+|+|.|+|.
T Consensus 102 ~~~V~D~d~-~~~dd~iG~~~i~l~~l~~~~~~~-------~~~~~W~~L~------~~G~i~l~l~~~ 156 (157)
T 2fk9_A 102 ELAVFHETP-LGYDHFVANCTLQFQELLRTTGAS-------DTFEGWVDLE------PEGKVFVVITLT 156 (157)
T ss_dssp EEEEEECCS-SSSCEEEEEEEEEHHHHHHHHTTC-------SEEEEEEECB------SSCEEEEEEEEC
T ss_pred EEEEEECCC-CCCCCEEEEEEEEHHHhhcccCCC-------CcccEEEECC------CCcEEEEEEEEE
Confidence 999999987 688999999999999999762111 1224589996 379999999985
No 11
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.84 E-value=1.4e-20 Score=153.16 Aligned_cols=118 Identities=15% Similarity=0.258 Sum_probs=95.2
Q ss_pred ceEEEEEEEEecCCCCC---CCCCCCCcEEEEEECC--CCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEe
Q 020960 3 KIWVEVCLISARGLRRS---SSLWKLQWFAVGWIDP--NNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYS 77 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~---d~~gk~DPYV~v~ld~--~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d 77 (319)
.+.|+|+|++|++|+.. +..++.||||++++.+ ..++||+++++ +.||+|||+|.|.+.... ...|+|+|||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~--~~~l~i~V~d 78 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPNQ--ENVLEITLMD 78 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTTS--CCEEEEEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCC-CCCCcccceEEEEecCCC--CCEEEEEEEE
Confidence 57899999999999974 4557899999999975 47889999885 899999999999996432 5789999999
Q ss_pred cCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccceEEEEEEEEe
Q 020960 78 REPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQGFIDVSVCIS 140 (319)
Q Consensus 78 ~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G~L~lsL~f~ 140 (319)
++. .+|++||++.|+|++|..+.. ...|+.|.. +.+|+|+|.|...
T Consensus 79 ~d~--~~~~~iG~~~i~l~~l~~~~~-----------~~~~~~L~~----~~~g~i~~~le~~ 124 (126)
T 1rlw_A 79 ANY--VMDETLGTATFTVSSMKVGEK-----------KEVPFIFNQ----VTEMVLEMSLEVA 124 (126)
T ss_dssp CCS--SCCEEEEEEEEEGGGSCTTCE-----------EEEEEEETT----TEEEEEEEEEECC
T ss_pred CCC--CCCceeEEEEEEHHHccCCCc-----------EEEEEEcCC----CceEEEEEEEEeC
Confidence 985 369999999999999975432 245888862 4567777766543
No 12
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.84 E-value=1.9e-20 Score=156.49 Aligned_cols=123 Identities=16% Similarity=0.128 Sum_probs=88.4
Q ss_pred CCceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCC
Q 020960 1 MGKIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREP 80 (319)
Q Consensus 1 M~~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~ 80 (319)
|+.+.|.|+|++|++|.. .+++||||++.. ++.||+++++++.||+|||+|.|.+... ...|+|+|||++
T Consensus 2 ~~~~~L~V~V~~A~~l~~---~g~~DPYv~v~~---~~~kt~~~~~~t~nP~WnE~f~f~v~~~---~~~L~~~V~D~d- 71 (131)
T 2cjt_A 2 GVMSLLCVGVKKAKFDGA---QEKFNTYVTLKV---QNVKSTTIAVRGSQPSWEQDFMFEINRL---DLGLTVEVWNKG- 71 (131)
T ss_dssp CCCEEEEEEEEEEECSSC---GGGCEEEEEEEE---TTEEEECCCEESSSCEEEEEEEEEECCC---SSEEEEEEEECC-
T ss_pred CcceEEEEEEEEeECCCC---CCCcCeEEEEEe---cCEEEeEecCCCCCceECCEEEEEEeCC---CCeEEEEEEECC-
Confidence 788999999999998852 477999999992 3456666665689999999999999864 467999999998
Q ss_pred CCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccceE-------EEEEEEEe
Q 020960 81 IFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQGF-------IDVSVCIS 140 (319)
Q Consensus 81 ~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G~-------L~lsL~f~ 140 (319)
+.+|++||++.|+|+++........ ......+|.++. .+|+.+|+ +.++++|.
T Consensus 72 -~~~dd~iG~~~i~l~~l~~~~~~~~-----~~~~~~~~~~~~-~~g~~~G~~~p~~~~~~~~~~~~ 131 (131)
T 2cjt_A 72 -LIWDTMVGTVWIPLRTIRQSNEEGP-----GEWLTLDSQAIM-ADSEICGTKDPTFHRILLDAHFE 131 (131)
T ss_dssp -SSCEEEEEEEEEEGGGSCBCSSCCC-----CEEEECBC-----------CCSCCCCCEEEEEEEEC
T ss_pred -CCCCCeEEEEEEEHHHhhhcCCCCc-----cccEEccccccc-CCCcCcceECCCccEEEEEEEeC
Confidence 5899999999999999986542110 122334566554 57777777 88888873
No 13
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.81 E-value=7.1e-20 Score=151.41 Aligned_cols=115 Identities=19% Similarity=0.257 Sum_probs=94.1
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEC----CCCeEEeeecCCCCCCCeeeEEEEEEe-CCCCCCcceEEEEEEe
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWID----PNNKYCTKIDASGKENPVWRTKFAAVV-DDSNFQDAALHVEVYS 77 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld----~~~k~kTkV~k~gg~NPvWNEtF~f~V-~~~~lq~~~L~VeV~d 77 (319)
.+.|+|+|++|++|+..+..++.||||++++. ...++||+++++ +.||+|||+|.|.+ ....+....|+|+|||
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK-TLEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSS-CSSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccC-CCCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 46899999999999998888899999999994 346889999886 99999999999994 4332335789999999
Q ss_pred cCCCCCC--CceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccce
Q 020960 78 REPIFLR--ERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQG 131 (319)
Q Consensus 78 ~~~~~~k--DklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G 131 (319)
++. +.+ |++||++.|+|.++.... ...||.|..+++++.+|
T Consensus 99 ~d~-~~~~~~~~lG~~~i~l~~l~~~~------------~~~W~~L~~~~~g~~sg 141 (141)
T 1v27_A 99 QAR-VREEESEFLGEILIELETALLDD------------EPHWYKLQTHDSGPSSG 141 (141)
T ss_dssp BCS-SSSCCBCCCEEEEEEGGGCCCSS------------EEEEEECBCCSSCCCCC
T ss_pred CCC-CcCCCCceEEEEEEEccccCCCC------------CCceEECcccccCCCCC
Confidence 987 565 999999999999987532 24599998766666554
No 14
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=1.5e-19 Score=152.10 Aligned_cols=106 Identities=20% Similarity=0.222 Sum_probs=90.6
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC----CCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEec
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP----NNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSR 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~----~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~ 78 (319)
.+.|+|+|++|++|+..+..++.||||+|++.+ ..++||+++++ +.||+|||+|.|.|....+ ...|+|+|||+
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~-~~~L~i~V~d~ 107 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKC-SLNPEWNETFRFQLKESDK-DRRLSVEIWDW 107 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSS-CSSCEEEEEEEEECCSGGG-GCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCC-CCCCcCCcEEEEEeccccC-CCEEEEEEEEC
Confidence 467999999999999988888999999999964 46889999986 9999999999999976422 36899999999
Q ss_pred CCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEe
Q 020960 79 EPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRK 123 (319)
Q Consensus 79 ~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr 123 (319)
+. +.+|++||++.|+|.+|.... ...||.|..
T Consensus 108 d~-~~~~~~iG~~~i~l~~l~~~~------------~~~W~~L~~ 139 (149)
T 1a25_A 108 DL-TSRNDFMGSLSFGISELQKAG------------VDGWFKLLS 139 (149)
T ss_dssp CS-SSCCEEEEEEEEEHHHHTTCC------------EEEEEECBC
T ss_pred CC-CCCCCEEEEEEEEHHHhCcCc------------cCCeEEccC
Confidence 87 678999999999999998642 134899975
No 15
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.80 E-value=2e-19 Score=147.97 Aligned_cols=106 Identities=21% Similarity=0.235 Sum_probs=90.4
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEC----CCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEec
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWID----PNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSR 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld----~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~ 78 (319)
.+.|+|+|++|++|+..+..++.||||++++. ...++||+++++ +.||+|||+|.|.+..... ...|.|+|||+
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~~~~~~~-~~~l~i~v~d~ 92 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRS-TLNPQWNESFTFKLKPSDK-DRRLSVEIWDW 92 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCS-CSSCEEEEEEEEECCGGGG-GCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcC-CCCCCcccEEEEEcCchhc-CCEEEEEEEEC
Confidence 46899999999999998888899999999995 356889999875 8999999999999875422 35799999999
Q ss_pred CCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEe
Q 020960 79 EPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRK 123 (319)
Q Consensus 79 ~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr 123 (319)
+. +.+|++||++.|+|++|..... ..||.|..
T Consensus 93 d~-~~~~~~iG~~~i~l~~l~~~~~------------~~W~~L~~ 124 (137)
T 3rdl_A 93 DR-TTRNDFMGSLSFGVSELMKMPA------------SGWYKLLN 124 (137)
T ss_dssp CS-SSCCEEEEEEEEEHHHHHHSCE------------EEEEECBC
T ss_pred CC-CCCCceEEEEEEeHHHhccCcc------------CceEECcC
Confidence 87 6789999999999999986531 35899975
No 16
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.80 E-value=1.9e-19 Score=149.72 Aligned_cols=107 Identities=21% Similarity=0.256 Sum_probs=88.3
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC----CCeEEeeecCCCCCCCeeeEEEEEE-eCCCCCCcceEEEEEEe
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP----NNKYCTKIDASGKENPVWRTKFAAV-VDDSNFQDAALHVEVYS 77 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~----~~k~kTkV~k~gg~NPvWNEtF~f~-V~~~~lq~~~L~VeV~d 77 (319)
.+.|+|+|++|++|+. +..+..||||++++.+ ..++||+++++ +.||+|||+|.|. |....++...|.|+|||
T Consensus 19 ~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 19 NGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRK-TRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp TTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCS-CSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcC-CCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 4689999999999996 6678899999999932 46789999885 9999999999999 76432235789999999
Q ss_pred cCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEe
Q 020960 78 REPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRK 123 (319)
Q Consensus 78 ~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr 123 (319)
++. +.+|++||++.|+|.++..+.. ...||.|..
T Consensus 97 ~d~-~~~~~~lG~~~i~l~~l~~~~~-----------~~~W~~L~~ 130 (134)
T 2b3r_A 97 AES-LRENFFLGGITLPLKDFNLSKE-----------TVKWYQLTA 130 (134)
T ss_dssp CCS-SSCCEEEEEEEEEGGGSCTTSC-----------EEEEEECBC
T ss_pred CCC-CCCCcEEEEEEEEhhhccCCCC-----------cceeEECCC
Confidence 997 6789999999999999976421 245899974
No 17
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=1.8e-19 Score=150.06 Aligned_cols=108 Identities=18% Similarity=0.154 Sum_probs=89.9
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEC--CCCeEEeeecCCCCCCCeeeEEEEEEeCCC-CCCcceEEEEEEecC
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWID--PNNKYCTKIDASGKENPVWRTKFAAVVDDS-NFQDAALHVEVYSRE 79 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld--~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~-~lq~~~L~VeV~d~~ 79 (319)
.+.|+|+|++|++|+..+..++.||||++++. ...++||+++++ +.||+|||+|.|.+-.. .+....|.|+|||++
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 103 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRK-NLNPHWNETFLFEGFPYEKVVQRILYLQVLDYD 103 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTT-CSSCCCCEEEEECSCCHHHHTTSEEEEEEEECC
T ss_pred CCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcC-CCCCccccEEEECccCHHHcccCEEEEEEEECC
Confidence 56899999999999998888899999999995 346889999874 99999999999985321 122478999999998
Q ss_pred CCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEe
Q 020960 80 PIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRK 123 (319)
Q Consensus 80 ~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr 123 (319)
. +.+|++||++.|+|.+|..+.. ...||.|..
T Consensus 104 ~-~~~~~~iG~~~i~l~~l~~~~~-----------~~~W~~L~~ 135 (141)
T 2d8k_A 104 R-FSRNDPIGEVSIPLNKVDLTQM-----------QTFWKDLKP 135 (141)
T ss_dssp S-SSSCEEEEEEEEETTTSCTTSC-----------EEEEECCEE
T ss_pred C-CCCCcEEEEEEEEhhhhcCCCC-----------ccEEEECcC
Confidence 7 6889999999999999986532 245899986
No 18
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=5.8e-19 Score=146.42 Aligned_cols=98 Identities=21% Similarity=0.259 Sum_probs=84.6
Q ss_pred ceEEEEEEEEecCCCCCCCC-CCCCcEEEEEECC--CCeEEeeecCCCCCCCeeeEEEEEE-eCCCCCCcceEEEEEEec
Q 020960 3 KIWVEVCLISARGLRRSSSL-WKLQWFAVGWIDP--NNKYCTKIDASGKENPVWRTKFAAV-VDDSNFQDAALHVEVYSR 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~-gk~DPYV~v~ld~--~~k~kTkV~k~gg~NPvWNEtF~f~-V~~~~lq~~~L~VeV~d~ 78 (319)
.+.|+|+|++|++|+..+.+ ++.||||++++.+ ..++||+++++ +.||+|||+|.|. +....+....|.|+|||+
T Consensus 21 ~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~ 99 (138)
T 1ugk_A 21 RKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRK-TLDPAFDETFTFYGIPYTQIQELALHFTILSF 99 (138)
T ss_dssp GTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSS-CSSCEEEEEEEEECCCSTTGGGCEEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcC-CCCCcEeeEEEEcCcCHHHhccCEEEEEEEEC
Confidence 46899999999999998875 7899999999963 47899999884 9999999999996 765434457899999999
Q ss_pred CCCCCCCceeEEEEEechhhcccc
Q 020960 79 EPIFLRERLLGTATIALKEFLAKY 102 (319)
Q Consensus 79 ~~~~~kDklIG~a~IpL~dL~~~~ 102 (319)
+. +.+|++||++.|+|.+|....
T Consensus 100 d~-~~~~~~lG~~~i~l~~l~~~~ 122 (138)
T 1ugk_A 100 DR-FSRDDIIGEVLIPLSGIELSE 122 (138)
T ss_dssp CS-SCCCCCCEEEEEECTTCCCTT
T ss_pred CC-CCCCcEEEEEEEehhHccCCC
Confidence 87 689999999999999997653
No 19
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.79 E-value=2e-19 Score=149.85 Aligned_cols=107 Identities=18% Similarity=0.183 Sum_probs=89.6
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEC--CCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCC
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWID--PNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREP 80 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld--~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~ 80 (319)
.+.|+|+|++|++|+..+..++.||||++++. ...++||+++++ +.||+|||+|.|.|....+....|+|+|||++.
T Consensus 33 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 111 (143)
T 3f04_A 33 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 111 (143)
T ss_dssp TTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCS-CSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcC-CCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC
Confidence 56899999999999998878899999999994 456889999875 899999999999986532334789999999987
Q ss_pred CCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeE
Q 020960 81 IFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLR 122 (319)
Q Consensus 81 ~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lr 122 (319)
+.+|++||++.|+|.++..+.. ...||.|.
T Consensus 112 -~~~~~~iG~~~i~l~~l~~~~~-----------~~~W~~L~ 141 (143)
T 3f04_A 112 -FSKHDIIGEFKVPMNTVDFGHV-----------TEEWRDLQ 141 (143)
T ss_dssp -SSCCEEEEEEEEEGGGCCTTSC-----------EEEEEECB
T ss_pred -CCCCceEEEEEEEHHHccCCCC-----------cceEEECc
Confidence 6799999999999999976432 23588886
No 20
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.79 E-value=4e-19 Score=150.12 Aligned_cols=108 Identities=18% Similarity=0.181 Sum_probs=90.1
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEC--CCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCC
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWID--PNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREP 80 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld--~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~ 80 (319)
.+.|+|+|++|++|+..+..+..||||++++. ...++||+++++ +.||+|||+|.|.|....+....|.|+|||++.
T Consensus 41 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 119 (152)
T 1rsy_A 41 NNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR 119 (152)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTT-CSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS
T ss_pred CCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCC-CCCCcCcccEEEeecHHHcCCCEEEEEEEECCC
Confidence 56899999999999998888899999999995 346889999886 899999999999886432234789999999987
Q ss_pred CCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEe
Q 020960 81 IFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRK 123 (319)
Q Consensus 81 ~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr 123 (319)
+.+|++||++.|+|.++..+.. ...||.|..
T Consensus 120 -~~~~~~iG~~~i~l~~l~~~~~-----------~~~W~~L~~ 150 (152)
T 1rsy_A 120 -FSKHDIIGEFKVPMNTVDFGHV-----------TEEWRDLQS 150 (152)
T ss_dssp -SSCCEEEEEEEEEGGGCCCSSC-----------EEEEEECBC
T ss_pred -CCCCcEEEEEEEEchhccCCCC-----------cceEEECCC
Confidence 6789999999999999965431 235888863
No 21
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.78 E-value=2.2e-18 Score=150.23 Aligned_cols=122 Identities=16% Similarity=0.127 Sum_probs=92.2
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCCCC
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREPIF 82 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~~~ 82 (319)
...|.|+|++|++|. ..+++||||+++ .++.||+++++++.||+|||+|.|.|... ...|+|+|||++ +
T Consensus 13 ~~~L~V~V~~A~~l~---~~g~~DPYV~v~---~~~~kt~~~~~~t~nP~WnE~f~f~v~~~---~~~L~~~V~D~d--~ 81 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG---AQEKFNTYVTLK---VQNVESTTIAVRGSQPSWEQDFMFEINRL---DLGLTVEVWNKG--L 81 (167)
T ss_dssp CCEEEEEEEEEECSS---CGGGCEEEEEEE---ETTEEEECCCEESSSCEEEEEEEEECCCT---TSEEEEEEEECC--S
T ss_pred eEEEEEEEEEEECCC---CCCCCCeEEEEE---ecceEEEEecCCCCCCCCCCEEEEEeeCC---CCEEEEEEEECC--C
Confidence 458999999999884 257899999999 23457777765689999999999999864 467999999998 5
Q ss_pred CCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccceE-------EEEEEEEee
Q 020960 83 LRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQGF-------IDVSVCISE 141 (319)
Q Consensus 83 ~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G~-------L~lsL~f~~ 141 (319)
.+|++||++.|+|+++....... .......+|.+++ .+|+.+|+ |.+.++|..
T Consensus 82 ~~dd~iG~~~i~L~~l~~~~~~g-----~~~~~~~~~~~~~-~~g~~~g~~~p~~~~lll~~~~e~ 141 (167)
T 2cjs_A 82 IWDTMVGTVWIPLRTIRQSNEEG-----PGEWLTLDSQAIM-ADSEICGTKDPTFHRILLDAHFEL 141 (167)
T ss_dssp SCCEEEEEEEEEGGGSCBCSSCC-----CCEEEEEEEEEEE-ETTEEEEEEEEEEEEEEEEEEEEC
T ss_pred CCCceEEEEEEEHHHhcccCcCC-----cccceeeeeeeEc-CCCCCCceEccccceEEEEEEeec
Confidence 79999999999999997654211 0123334666664 46665555 677777754
No 22
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.78 E-value=7e-19 Score=147.77 Aligned_cols=108 Identities=17% Similarity=0.218 Sum_probs=90.8
Q ss_pred ceEEEEEEEEecCCCCCC-CCCCCCcEEEEEECCC----CeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEe
Q 020960 3 KIWVEVCLISARGLRRSS-SLWKLQWFAVGWIDPN----NKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYS 77 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d-~~gk~DPYV~v~ld~~----~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d 77 (319)
.+.|+|+|++|++|+..+ ..++.||||++++.+. .++||+++++ +.||+|||+|.|.|....++...|.|+|||
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~~~~L~~~V~d 100 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRD-TVNPLYDETLRYEIPESLLAQRTLQFSVWH 100 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSS-CSSCEEEEEEEEECCSTTGGGCEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCC-CCCCcEeeEEEEEeChhHhCceEEEEEEEE
Confidence 468999999999999887 4678999999999642 4789999875 899999999999997754445689999999
Q ss_pred cCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEe
Q 020960 78 REPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRK 123 (319)
Q Consensus 78 ~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr 123 (319)
++. +.+|++||++.|+|.++..+... ..||.|..
T Consensus 101 ~d~-~~~~~~iG~~~i~l~~l~~~~~~-----------~~W~~L~~ 134 (148)
T 3fdw_A 101 HGR-FGRNTFLGEAEIQMDSWKLDKKL-----------DHCLPLHG 134 (148)
T ss_dssp ECG-GGCEEEEEEEEEEHHHHHHHCCS-----------EEEEECBC
T ss_pred CCC-CcCCcEEEEEEEEcccccccCCc-----------cceEECcC
Confidence 987 67899999999999999875421 35899985
No 23
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=1e-18 Score=142.63 Aligned_cols=97 Identities=18% Similarity=0.223 Sum_probs=79.1
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEC----CCCeEEeeecCCCCCCCeeeEEEEEEeCC-CCCCcceEEEEEEe
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWID----PNNKYCTKIDASGKENPVWRTKFAAVVDD-SNFQDAALHVEVYS 77 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld----~~~k~kTkV~k~gg~NPvWNEtF~f~V~~-~~lq~~~L~VeV~d 77 (319)
.+.|+|+|++|++|+..+..++.||||++++. ...++||+++++ +.||+|||+|.|.+.. ..+....|+|+|||
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d 95 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKK-TLEPKWNQTFIYSPVHRREFRERMLEITLWD 95 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSS-BSSCEEEEEEEECSCCGGGGGGCEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccC-CCCCccccEEEEccCCHHHhcCCeEEEEEEE
Confidence 46899999999999998888899999999993 347889999875 8999999999999532 22335789999999
Q ss_pred cCCCCCC--CceeEEEEEechhhccc
Q 020960 78 REPIFLR--ERLLGTATIALKEFLAK 101 (319)
Q Consensus 78 ~~~~~~k--DklIG~a~IpL~dL~~~ 101 (319)
++. +.+ |++||++.|+|.++...
T Consensus 96 ~d~-~~~~~~~~lG~~~i~l~~l~~~ 120 (129)
T 2bwq_A 96 QAR-VREEESEFLGEILIELETALLD 120 (129)
T ss_dssp C--------CEEEEEEEEEGGGCCCS
T ss_pred CCc-CcCcCCceeEEEEEEccccCCC
Confidence 986 565 99999999999998764
No 24
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=4.4e-19 Score=147.58 Aligned_cols=107 Identities=22% Similarity=0.209 Sum_probs=86.8
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC--C--CeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEec
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP--N--NKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSR 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~--~--~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~ 78 (319)
.+.|+|+|++|++|+..+..+ .||||++++.+ . .++||+++++ +.||+|||+|.|.|....++...|+|+|||+
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 100 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKK-TLNPVFDQSFDFSVSLPEVQRRTLDVAVKNS 100 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCS-CSSCEEEEEEEECCCHHHHHHCEEEEEEEEC
T ss_pred CCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCC-CCCCCcCceEEEEecHHHhCcCEEEEEEEEC
Confidence 568999999999999988888 99999999943 2 6789999885 9999999999999864322345899999999
Q ss_pred CCCCC--CCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEe
Q 020960 79 EPIFL--RERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRK 123 (319)
Q Consensus 79 ~~~~~--kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr 123 (319)
+. +. .|++||++.|+|.++...... ..||.|..
T Consensus 101 d~-~~~~~~~~iG~~~i~l~~~~~~~~~-----------~~W~~L~~ 135 (142)
T 2dmg_A 101 GG-FLSKDKGLLGKVLVALASEELAKGW-----------TQWYDLTE 135 (142)
T ss_dssp CC-SSCCSCCCCEEEEEECCCSTTTTCB-----------CCBCCCBC
T ss_pred CC-ccccCCcEEEEEEEecccccccccc-----------cceeeccC
Confidence 86 44 357999999999998764321 23888985
No 25
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=1.6e-19 Score=150.01 Aligned_cols=108 Identities=19% Similarity=0.201 Sum_probs=88.9
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCC-------------CeEEeeecCCCCCCCeeeEEEEEE-eCCCCCCc
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPN-------------NKYCTKIDASGKENPVWRTKFAAV-VDDSNFQD 68 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~-------------~k~kTkV~k~gg~NPvWNEtF~f~-V~~~~lq~ 68 (319)
.+.|+|+|++|++|+..+..++.||||++++.+. .++||+++++ +.||+|||+|.|. +....+..
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~v~~~~l~~ 95 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQK-SLNPEWNQTVIYKSISMEQLMK 95 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHH-HHSCEEEEEEEECSCCHHHHTT
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCC-CCCCCCCCEEEECCcCHHHccC
Confidence 3579999999999999988889999999999753 2578999875 8999999999997 64322224
Q ss_pred ceEEEEEEecCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEe
Q 020960 69 AALHVEVYSREPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRK 123 (319)
Q Consensus 69 ~~L~VeV~d~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr 123 (319)
..|.|+|||++. +.+|++||++.|+|.++...... ..||.|..
T Consensus 96 ~~l~i~V~d~d~-~~~~~~lG~~~i~l~~l~~~~~~-----------~~W~~L~~ 138 (142)
T 1rh8_A 96 KTLEVTVWDYDR-FSSNDFLGEVLIDLSSTSHLDNT-----------PRWYPLKE 138 (142)
T ss_dssp CEEEEEEEEECS-SSCEEEEEEEEEETTSCGGGTTC-----------CEEEECBC
T ss_pred CEEEEEEEECCC-CCCCceEEEEEEeccccccCCCC-----------CeEEECCc
Confidence 789999999997 67899999999999999764321 35899975
No 26
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=2.9e-19 Score=149.68 Aligned_cols=97 Identities=20% Similarity=0.232 Sum_probs=81.1
Q ss_pred ceEEEEEEEEecCCCCC-C------CCCCCCcEEEEEECC--CCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEE
Q 020960 3 KIWVEVCLISARGLRRS-S------SLWKLQWFAVGWIDP--NNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHV 73 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~-d------~~gk~DPYV~v~ld~--~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~V 73 (319)
.+.|+|+|++|++|+.. + .++..||||+|++.+ ..++||+++++ +.||+|||+|.|.|....++...|+|
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~~ 103 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRK-TQKPVFEERYTFEIPFLEAQRRTLLL 103 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCS-CSSCCCCBCCEECCCHHHHHHSEEEE
T ss_pred CCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccC-CCCCeEeeeEEEEeChHHhccCEEEE
Confidence 56899999999999974 2 245799999999963 46889999875 89999999999998653223468999
Q ss_pred EEEecCCCCCCCceeEEEEEechhhccc
Q 020960 74 EVYSREPIFLRERLLGTATIALKEFLAK 101 (319)
Q Consensus 74 eV~d~~~~~~kDklIG~a~IpL~dL~~~ 101 (319)
+|||++. +.+|++||++.|+|.+|...
T Consensus 104 ~V~d~d~-~~~~~~iG~~~i~l~~l~~~ 130 (147)
T 2enp_A 104 TVVDFDK-FSRHCVIGKVSVPLCEVDLV 130 (147)
T ss_dssp EEECCST-TCCSCCCEEEEEETTTSCTT
T ss_pred EEEECCC-CcCCcEEEEEEEechhcCCC
Confidence 9999987 68899999999999999654
No 27
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=2.4e-19 Score=153.92 Aligned_cols=96 Identities=17% Similarity=0.130 Sum_probs=83.7
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC---C--CeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEe
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP---N--NKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYS 77 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~---~--~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d 77 (319)
.+.|+|+|++|++|...+..++.||||++++.+ . .++||+++++ ++||+|||+|.|.|....+....|.|+|||
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~-tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d 120 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDA-SDTLVFNEVFWVSMSYPALHQKTLRVDVCT 120 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEEC-CSSEEEEEEEEEECCHHHHHHCEEEEEEEE
T ss_pred CCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCC-CCCCccccEEEEEcCHHHhCcCEEEEEEEE
Confidence 468999999999999988888999999999965 2 3789999875 899999999999987533335789999999
Q ss_pred cCCCCCCCceeEEEEEechhhcc
Q 020960 78 REPIFLRERLLGTATIALKEFLA 100 (319)
Q Consensus 78 ~~~~~~kDklIG~a~IpL~dL~~ 100 (319)
++. +.+|++||++.|+|.++..
T Consensus 121 ~d~-~~~~d~iG~~~i~l~~l~~ 142 (155)
T 2z0u_A 121 TDR-SHLEECLGGAQISLAEVCR 142 (155)
T ss_dssp ECT-TSCEEEEEEEEEECTTSCT
T ss_pred CCC-CCCCcEEEEEEEEHHHccC
Confidence 987 6899999999999999963
No 28
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.78 E-value=1.1e-18 Score=145.64 Aligned_cols=105 Identities=13% Similarity=0.151 Sum_probs=86.4
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEC---CCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecC
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWID---PNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSRE 79 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld---~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~ 79 (319)
.+.|.|+|++|++ .+..+..||||++++. ...++||+|+++ ++||+|||+|.|.|....++...|.|+|||++
T Consensus 25 ~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~-tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 25 KAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKR-QLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCC-CSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcC-CCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 5789999999994 4566889999999994 234689999875 89999999999999765555678999999998
Q ss_pred CCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEe
Q 020960 80 PIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRK 123 (319)
Q Consensus 80 ~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr 123 (319)
. +.+|++||++.|+|.++..... ...|+.|..
T Consensus 101 ~-~~~dd~lG~~~i~l~~l~~~~~-----------~~~W~~L~~ 132 (138)
T 1wfm_A 101 R-FSRHSVAGELRLGLDGTSVPLG-----------AAQWGELKT 132 (138)
T ss_dssp S-SCTTSCSEEEEEESSSSSSCTT-----------CCEEEECCC
T ss_pred C-CCCCcEEEEEEEEcccccCccc-----------ccceeeCcC
Confidence 7 6899999999999999964321 134899985
No 29
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=2.9e-18 Score=157.44 Aligned_cols=127 Identities=18% Similarity=0.183 Sum_probs=104.1
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC--CCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecC
Q 020960 2 GKIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP--NNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSRE 79 (319)
Q Consensus 2 ~~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~--~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~ 79 (319)
..+.|+|+|++|++|...+..+++||||++++.+ ..+++|+++++ +.||+|||+|.|.|....+....|+|+|||++
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~-~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRK-TLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCS-CSSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccC-CCCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 3578999999999999988888999999999964 46889999875 89999999999998754334578999999998
Q ss_pred CCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCC--CccceEEEEEEEEee
Q 020960 80 PIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNS--NKPQGFIDVSVCISE 141 (319)
Q Consensus 80 ~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~s--gKp~G~L~lsL~f~~ 141 (319)
. +.+|++||++.|+|.++..+.. ...|+.|..... .+..|+|++++++.+
T Consensus 96 ~-~~~~~~lG~~~i~l~~l~~~~~-----------~~~w~~L~~~~~~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 96 R-FSKHDIIGEFKVPMNTVDFGHV-----------TEEWRDLQSAEKEEQEKLGDICFSLRYVP 147 (284)
T ss_dssp S-SSCCCEEEEEEEEGGGCCCSSC-----------EEEEEECBCCSSCCCCCCCEEEEEEEEET
T ss_pred C-CCCCceeEEEEEcchhcccCCc-----------ceeEEEeeccccccccccccEEEEEEecC
Confidence 7 6789999999999999976431 235888875322 346899999999874
No 30
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.77 E-value=1e-18 Score=145.36 Aligned_cols=98 Identities=22% Similarity=0.351 Sum_probs=83.9
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC----CCeEEeeecCCCCCCCeeeEEEEEE-eCCCCCCcceEEEEEEe
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP----NNKYCTKIDASGKENPVWRTKFAAV-VDDSNFQDAALHVEVYS 77 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~----~~k~kTkV~k~gg~NPvWNEtF~f~-V~~~~lq~~~L~VeV~d 77 (319)
.+.|+|+|++|++|+..+..++.||||++++.+ ..++||+++++ +.||+|||+|.|. +....++...|+|+|||
T Consensus 28 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 106 (142)
T 2chd_A 28 NSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRN-TRNPVWNETLQYHGITEEDMQRKTLRISVCD 106 (142)
T ss_dssp GTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCS-CSSCEEEEEEEEESCCHHHHHHCEEEEEEEE
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCC-CCCCcCcCEEEEcccCHHHccCCEEEEEEEE
Confidence 468999999999999998888999999999965 36889999885 9999999999998 65422223689999999
Q ss_pred cCCCCCCCceeEEEEEechhhcccc
Q 020960 78 REPIFLRERLLGTATIALKEFLAKY 102 (319)
Q Consensus 78 ~~~~~~kDklIG~a~IpL~dL~~~~ 102 (319)
++. +.+|++||++.|+|.+|..+.
T Consensus 107 ~d~-~~~d~~iG~~~i~l~~l~~~~ 130 (142)
T 2chd_A 107 EDK-FGHNEFIGETRFSLKKLKANQ 130 (142)
T ss_dssp ECT-TSCEEEEEEEEEEGGGCCTTC
T ss_pred CCC-CCCCcEEEEEEEEHHHcCCCC
Confidence 987 678999999999999998653
No 31
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.77 E-value=2.4e-18 Score=141.46 Aligned_cols=96 Identities=17% Similarity=0.234 Sum_probs=82.9
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCC----CeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEec
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPN----NKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSR 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~----~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~ 78 (319)
.+.|+|+|++|++|+..+..++.||||++++.+. .++||+++++ +.||+|||+|.|.|....+....|.|+|||+
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~-t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~ 93 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKR-NLNPIFNESFAFDIPTEKLRETTIIITVMDK 93 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSS-CSSCEEEEEEEEECCGGGGGGEEEEEEEEEC
T ss_pred CCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccC-CCCCcCcceEEEECChhhcCceEEEEEEEEC
Confidence 5689999999999999888888999999999643 5789999875 8999999999999876544447899999999
Q ss_pred CCCCCCCceeEEEEEechhhcc
Q 020960 79 EPIFLRERLLGTATIALKEFLA 100 (319)
Q Consensus 79 ~~~~~kDklIG~a~IpL~dL~~ 100 (319)
+. +.+|++||++.|+|+++..
T Consensus 94 ~~-~~~~~~lG~~~i~l~~~~~ 114 (138)
T 3n5a_A 94 DK-LSRNDVIGKIYLSWKSGPG 114 (138)
T ss_dssp CS-SSCCEEEEEEEESSSSCHH
T ss_pred CC-CCCCcEEEEEEEccccCCh
Confidence 87 6789999999999997543
No 32
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.76 E-value=6.3e-18 Score=145.18 Aligned_cols=121 Identities=14% Similarity=0.171 Sum_probs=101.9
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCCCCC
Q 020960 4 IWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREPIFL 83 (319)
Q Consensus 4 ~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~~~~ 83 (319)
-.|+|+|++|++|+ ++.|||+++.+. ..++||+++++++.||+|||+|+|.+....++.+.|+|.|||+++ ++
T Consensus 21 msL~V~l~~a~~Lp-----g~~Dp~akv~FR-g~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~-v~ 93 (144)
T 3l9b_A 21 MALIVHLKTVSELR-----GRADRIAKVTFR-GQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK-VF 93 (144)
T ss_dssp EEEEEEEEEEESCC-----SCEEEEEEEEET-TEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT-TS
T ss_pred EEEEEEEEEecCCC-----CCCCCeEEEEEe-ccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc-cc
Confidence 46999999999998 468999999994 679999999856899999999999998765668999999999998 78
Q ss_pred CCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccceEEEEEEEEeec
Q 020960 84 RERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQGFIDVSVCISEE 142 (319)
Q Consensus 84 kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G~L~lsL~f~~~ 142 (319)
+|++||++.|+|.+|...... ..+-.|.+.++....++|.|+|+|.+.
T Consensus 94 ~nrlIG~~~i~Lq~lv~~~~l-----------~l~~~LvD~n~~~~~a~I~l~l~Y~pp 141 (144)
T 3l9b_A 94 SNKLIGTFRMVLQKVVEENRV-----------EVSDTLIDDNNAIIKTSLSMEVRYQAA 141 (144)
T ss_dssp CCEEEEEEEEESHHHHHHSEE-----------EEEEEEECTTSCEEEEEEEEEEEEEET
T ss_pred CCCEEEEEEEEhHHhccCCeE-----------EEeecccCCCCCccccEEEEEEEecCC
Confidence 999999999999999987531 235667763333346899999999875
No 33
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.76 E-value=4.6e-18 Score=143.97 Aligned_cols=112 Identities=20% Similarity=0.209 Sum_probs=89.1
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC----CCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEe
Q 020960 2 GKIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP----NNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYS 77 (319)
Q Consensus 2 ~~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~----~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d 77 (319)
..+.|.|+|++|++|+..+ .+..||||++.+.+ ..++||+++++ +.||+|||+|.|.|....++ ..|.|+|||
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~~~-~~L~i~V~d 101 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPD-CRDPAFHEHFFFPVQEEDDQ-KRLLVTVWN 101 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTT-CSSCEEEEEEEEECCGGGTT-SEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCC-CCCCccccEEEEecccHHhC-CEEEEEEEe
Confidence 3578999999999999987 58899999999943 36789999875 99999999999999543332 459999999
Q ss_pred cCCCCCC-CceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCC
Q 020960 78 REPIFLR-ERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSN 127 (319)
Q Consensus 78 ~~~~~~k-DklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sg 127 (319)
++. +.+ |++||++.|+|.+|..... ....||.|..+..|
T Consensus 102 ~d~-~~~~d~~lG~~~i~l~~l~~~~~----------~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 102 RAS-QSRQSGLIGCMSFGVKSLLTPDK----------EISGWYYLLGEHLG 141 (153)
T ss_dssp CCS-SGGGCEEEEEEEEEHHHHTC--C----------CEEEEEECBCTTGG
T ss_pred CCC-CCCCCcEEEEEEEEHHHhcCCCC----------ccccEEECCChhhc
Confidence 986 566 9999999999999975211 12359999863333
No 34
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.76 E-value=5.1e-18 Score=144.12 Aligned_cols=94 Identities=16% Similarity=0.151 Sum_probs=81.4
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCC----CeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEec
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPN----NKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSR 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~----~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~ 78 (319)
.+.|+|+|++|++|+..+..+..||||++++.+. .++||+++++ +.||+|||+|.|.|....++...|.|+|||+
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 102 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 102 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecC-CCCCcccceEEEEcCHHHhCCcEEEEEEEEC
Confidence 5689999999999999988889999999999642 4789999875 8999999999999975434456899999999
Q ss_pred CCCCCCCceeEEEEEechhh
Q 020960 79 EPIFLRERLLGTATIALKEF 98 (319)
Q Consensus 79 ~~~~~kDklIG~a~IpL~dL 98 (319)
+. +.+|++||++.|+|.++
T Consensus 103 d~-~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 103 DK-IGKNDAIGKVFVGYNST 121 (159)
T ss_dssp CS-SSCCEEEEEEEEETTCC
T ss_pred CC-CCCCceEEEEEECCCCC
Confidence 97 67899999999999954
No 35
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.76 E-value=4.9e-18 Score=143.10 Aligned_cols=93 Identities=15% Similarity=0.140 Sum_probs=76.2
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC--C--CeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEec
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP--N--NKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSR 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~--~--~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~ 78 (319)
.+.|+|+|++|++|+..+..++.||||+|++.+ . .++||+++++ +.||+|||+|.|.|....++...|+|+|||+
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~ 107 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKC-TPNAVFNELFVFDIPCESLEEISVEFLVLDS 107 (153)
T ss_dssp TTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCS-CSSEEEEEEEEEECCSSSSTTEEEEEEEEEC
T ss_pred CCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccC-CCCCeecceEEEECCHHHhCceEEEEEEEeC
Confidence 468999999999999988888899999999943 2 2679999885 9999999999999977545457899999999
Q ss_pred CCCCCCCceeEEEEEechh
Q 020960 79 EPIFLRERLLGTATIALKE 97 (319)
Q Consensus 79 ~~~~~kDklIG~a~IpL~d 97 (319)
+. +.+|++||++.|+|.+
T Consensus 108 d~-~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 108 ER-GSRNEVIGRLVLGATA 125 (153)
T ss_dssp CT-TSCCEEEEEEEESTTC
T ss_pred CC-CCCCcEEEEEEECCCC
Confidence 87 6889999999999988
No 36
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.75 E-value=3e-18 Score=148.28 Aligned_cols=105 Identities=22% Similarity=0.227 Sum_probs=87.6
Q ss_pred ceEEEEEEEEecCCCCCCC-CCCCCcEEEEEECCC----CeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEE-
Q 020960 3 KIWVEVCLISARGLRRSSS-LWKLQWFAVGWIDPN----NKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVY- 76 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~-~gk~DPYV~v~ld~~----~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~- 76 (319)
.+.|+|+|++|++|+..+. .+..||||+|++.+. .++||+++++ +.||+|||+|.|.|... ...|.|+||
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~---~~~L~~~V~~ 104 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARK-TLDPLYQQSLVFDESPQ---GKVLQVIVWG 104 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEECSSCCT---TEEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCC-CCCCCCCcEEEEEecCC---CCEEEEEEEE
Confidence 4689999999999999885 688999999999643 3789999875 89999999999998653 588999999
Q ss_pred ecCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEe
Q 020960 77 SREPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRK 123 (319)
Q Consensus 77 d~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr 123 (319)
|++. +.+|++||++.|+|.++..+.. ...||.|..
T Consensus 105 d~d~-~~~d~~iG~~~i~l~~l~~~~~-----------~~~W~~L~~ 139 (171)
T 2q3x_A 105 DYGR-MDHKCFMGVAQILLEELDLSSM-----------VIGWYKLFP 139 (171)
T ss_dssp ECST-TCSSEEEEEEEECGGGSCTTSC-----------EEEEEECBC
T ss_pred cCCC-CCCCCEEEEEEEEHHHcccCCC-----------cceeEECCC
Confidence 8886 6789999999999999975432 245999985
No 37
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.75 E-value=8e-18 Score=144.06 Aligned_cols=95 Identities=17% Similarity=0.195 Sum_probs=83.4
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC----CCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEec
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP----NNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSR 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~----~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~ 78 (319)
.+.|+|+|++|++|+..+..++.||||++++.+ ..++||+++++ +.||+|||+|.|.|....+....|.|+|||+
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKK-TLNPEFNEEFFYDIKHSDLAKKSLDISVWDY 114 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCS-CSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccC-CCCCcccceEEEEcchHhcCCCEEEEEEEEC
Confidence 568999999999999988888999999999975 36889999875 9999999999999975434457899999999
Q ss_pred CCCCCCCceeEEEEEechhhc
Q 020960 79 EPIFLRERLLGTATIALKEFL 99 (319)
Q Consensus 79 ~~~~~kDklIG~a~IpL~dL~ 99 (319)
+. +.+|++||++.|+|.++.
T Consensus 115 d~-~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 115 DI-GKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp CS-SSCCEEEEEEEEETTCCH
T ss_pred CC-CCCCcEEEeEEEecccCC
Confidence 87 678999999999999864
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.74 E-value=2.2e-17 Score=153.76 Aligned_cols=128 Identities=20% Similarity=0.275 Sum_probs=100.8
Q ss_pred CceEEEEEEEEecCCCCCCCCCCCCcEEEEEE--CCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecC
Q 020960 2 GKIWVEVCLISARGLRRSSSLWKLQWFAVGWI--DPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSRE 79 (319)
Q Consensus 2 ~~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~l--d~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~ 79 (319)
..+.|.|+|++|++|+..+..++.||||++++ ++..++||+++++ ++||+|||+|.|.|....++...|+|+|||++
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRK-TLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCS-CSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCC-CCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 35789999999999999888889999999999 3567889999875 89999999999998654344568999999998
Q ss_pred CCCCCCceeEEEEEe-chhhcccccCCCCCCCCCccceEEEEeEeCC-CCccceEEEEEEEEee
Q 020960 80 PIFLRERLLGTATIA-LKEFLAKYSKNSEGSRSGIEEVGSYQLRKKN-SNKPQGFIDVSVCISE 141 (319)
Q Consensus 80 ~~~~kDklIG~a~Ip-L~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~-sgKp~G~L~lsL~f~~ 141 (319)
. +.+|++||++.|+ |.++...... ...|+.|.... ..+..|+|++++.+.+
T Consensus 97 ~-~~~~~~iG~~~i~~l~~~~~~~~~----------~~~w~~L~~~~~~~~~~G~i~vsl~y~~ 149 (296)
T 1dqv_A 97 R-FSRHDLIGQVVLDNLLELAEQPPD----------RPLWRDILEGGSEKADLGELNFSLCYLP 149 (296)
T ss_dssp S-SSCCCEEEEEECCCTTGGGSSCSS----------CCCCEECBCCSSCCSCCCEEEEEEEEET
T ss_pred C-CCCCceEEEEEeccccccccCCcc----------ceeeeccccccccccccceEEEEEEecc
Confidence 7 6899999999996 5555542211 12377776422 2345799999999865
No 39
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.69 E-value=2.1e-16 Score=156.24 Aligned_cols=122 Identities=17% Similarity=0.230 Sum_probs=100.0
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCCCC
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREPIF 82 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~~~ 82 (319)
.+.|+|+|++|++|+..+..++.||||+++++ ..+++|+++++ +.||+|||+|.|.+... ....|+|+|||++. +
T Consensus 386 ~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~-~~~~~T~~~~~-t~nP~w~e~f~f~~~~~--~~~~l~~~v~d~d~-~ 460 (510)
T 3jzy_A 386 IGRLMVHVIEATELKACKPNGKSNPYCEISMG-SQSYTTRTIQD-TLNPKWNFNCQFFIKDL--YQDVLCLTLFDRDQ-F 460 (510)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEET-TEEEECCCCSS-CSSCEEEEEEEEEESCT--TTCEEEEEEEECCS-S
T ss_pred CceEEEEeceeecCCCCCCCCCCCeEEEEEEC-CeeccCCccCC-CCCCccCceEEEEecCC--CCCEEEEEEEeCCC-C
Confidence 46899999999999999888999999999995 56889999885 89999999999999754 24779999999997 6
Q ss_pred CCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccceEEEEEEEEe
Q 020960 83 LRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQGFIDVSVCIS 140 (319)
Q Consensus 83 ~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G~L~lsL~f~ 140 (319)
.+|++||++.|+|.++..+..... ....|+.|. ++..|+|+|.+.+.
T Consensus 461 ~~~d~lG~~~~~l~~l~~~~~~~~-------~~~~~~~l~----~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 461 SPDDFLGRTEIPVAKIRTEQESKG-------PMTRRLLLH----EVPTGEVWVRFDLQ 507 (510)
T ss_dssp SSCCEEEEEEEEHHHHHHHHHHHC-------SCCEEEECB----SSSSCEEEEEEEEE
T ss_pred CCCCceEEEEEEHHHhccccCCCC-------ceeeeecCC----CCCCceEEEEEEEE
Confidence 889999999999999987643211 012366665 45779998888763
No 40
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.68 E-value=4.6e-16 Score=160.52 Aligned_cols=120 Identities=17% Similarity=0.166 Sum_probs=100.5
Q ss_pred ceEEEEEEEEecCCCCCCC--CCCCCcEEEEEECC----CCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEE
Q 020960 3 KIWVEVCLISARGLRRSSS--LWKLQWFAVGWIDP----NNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVY 76 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~--~gk~DPYV~v~ld~----~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~ 76 (319)
...|+|+|++|++|+..+. .+..||||+|++.+ ..++||+++++++.||+|||+|.|.|.... ...|+|+||
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~e--l~~L~~~V~ 573 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPD--LALVRFMVE 573 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGG--GCEEEEEEE
T ss_pred ceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCC--CCEEEEEEE
Confidence 5789999999999998763 57899999999964 268899999876699999999999997653 368999999
Q ss_pred ecCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCcc--ceEEEEEEEEe
Q 020960 77 SREPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKP--QGFIDVSVCIS 140 (319)
Q Consensus 77 d~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp--~G~L~lsL~f~ 140 (319)
|++. +.+|++||++.|+|.+|..+. .++.|+. ..|++ .++|.|.|.|.
T Consensus 574 D~D~-~~~dd~iG~~~ipl~~L~~G~--------------r~v~L~d-~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 574 DYDS-SSKNDFIGQSTIPWNSLKQGY--------------RHVHLLS-KNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp ECCS-SSCCEEEEEEEEEGGGBCCEE--------------EEEEEEC-TTSCEEEEEEEEEEEEEE
T ss_pred EcCC-CCCCceeEEEEEEHHHcCCCc--------------EEEeCCC-CCcCCCCceEEEEEEEEE
Confidence 9987 689999999999999997653 3788986 45554 57888888875
No 41
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.61 E-value=2.8e-15 Score=152.48 Aligned_cols=111 Identities=15% Similarity=0.146 Sum_probs=89.8
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCCCC
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREPIF 82 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~~~ 82 (319)
.+.|+|+|++|++|+. |.+++.||||+|++.+ +++||+|+++ ++||+|||+|.|.+... .....|+|+|||++. +
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~-~~~kTkvik~-tlNP~Wne~f~f~~~~~-~~~~~L~~~V~D~D~-~ 467 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGG-QEFRTGVVWN-NNNPRWTDKMDFENVLL-STGGPLRVQVWDADY-G 467 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETT-EEEECCCBCS-CSSCBCCCCEEEEEEET-TTCCCEEEEEEECCS-S
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECC-EeeeeeeecC-CCCCCCCeEEEEEEecC-CCCCEEEEEEEECCC-C
Confidence 4689999999999998 8889999999999964 5799999986 89999999999986421 125789999999997 6
Q ss_pred CCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccceEEEEEEEEe
Q 020960 83 LRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQGFIDVSVCIS 140 (319)
Q Consensus 83 ~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G~L~lsL~f~ 140 (319)
.+|++||++.++|.. +. ...|+.|. +|+|+|.+.+.
T Consensus 468 ~~dD~LG~~~~~L~~---g~------------~~~~~~l~-------~G~l~~~~~~~ 503 (540)
T 3nsj_A 468 WDDDLLGSCDRSPHS---GF------------HEVTCELN-------HGRVKFSYHAK 503 (540)
T ss_dssp SCCEEEEEEEECCCS---EE------------EEEEEECS-------SSEEEEEEEEE
T ss_pred CCCCEEEEEEEEeeC---Cc------------EEEEEEcC-------CeEEEEEEEEE
Confidence 789999999999872 21 12355553 48999888864
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.61 E-value=3.8e-15 Score=136.65 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=81.2
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC--C--CeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEec
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP--N--NKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSR 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~--~--~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~ 78 (319)
.+.|+|+|++|++|...+..+..||||++++.. . .++||+++++ +.||+|||+|.|.|....++...|.|+|||+
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKN-TLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCS-CSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred CCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecC-CCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 467999999999999988888999999999953 2 4679999875 8999999999999976544456899999999
Q ss_pred CCCCCCCceeEEEEEechhh
Q 020960 79 EPIFLRERLLGTATIALKEF 98 (319)
Q Consensus 79 ~~~~~kDklIG~a~IpL~dL 98 (319)
+. +.+|++||++.|+|..+
T Consensus 228 d~-~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 228 DK-IGKNDAIGKVFVGYNST 246 (284)
T ss_dssp CS-SSCCCEEEEEEEETTCC
T ss_pred CC-CCCCcEEEEEEECCCCC
Confidence 87 68999999999999864
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.54 E-value=1.4e-14 Score=152.19 Aligned_cols=95 Identities=19% Similarity=0.293 Sum_probs=83.0
Q ss_pred ceEEEEEEEEecCCCC---CCCCCCCCcEEEEEECC--CCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEe
Q 020960 3 KIWVEVCLISARGLRR---SSSLWKLQWFAVGWIDP--NNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYS 77 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~---~d~~gk~DPYV~v~ld~--~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d 77 (319)
.+.|+|+|++|++|+. .+..+++||||+|++.+ ..++||+|+++ ++||+|||+|.|.|... +...|+|+|||
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~-tlNPvWNEtF~F~v~~~--~~~~L~~~V~D 93 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNN-DINPVWNETFEFILDPN--QENVLEITLMD 93 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTT-CSSCEEEEEEEEEECTT--SCCBCEEEEEE
T ss_pred ccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcC-CCCCeeeeEEEEEecCC--CCCEEEEEEEE
Confidence 5789999999999998 66678899999999974 46889999985 89999999999999864 24789999999
Q ss_pred cCCCCCCCceeEEEEEechhhcccc
Q 020960 78 REPIFLRERLLGTATIALKEFLAKY 102 (319)
Q Consensus 78 ~~~~~~kDklIG~a~IpL~dL~~~~ 102 (319)
++. +. |++||++.|+|.+|..+.
T Consensus 94 ~D~-~~-ddfIG~v~I~L~~L~~g~ 116 (749)
T 1cjy_A 94 ANY-VM-DETLGTATFTVSSMKVGE 116 (749)
T ss_dssp CCS-SS-CEEEEEECCBSTTSCTTC
T ss_pred CCC-CC-CceeEEEEEEHHHcCCCC
Confidence 997 56 999999999999997553
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.54 E-value=3.3e-15 Score=139.02 Aligned_cols=96 Identities=14% Similarity=0.108 Sum_probs=82.7
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEC--C--CCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEec
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWID--P--NNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSR 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld--~--~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~ 78 (319)
.+.|+|+|++|++|+..+..+..||||++++. + ..++||+++++ +.||+|||+|.|.|....++...|.|+|||+
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~-t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKN-TLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCS-CSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred cceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecC-CCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 46899999999999998888889999999995 3 26789999875 8999999999999876544446799999999
Q ss_pred CCCCCCCceeEEEEEechhhcc
Q 020960 79 EPIFLRERLLGTATIALKEFLA 100 (319)
Q Consensus 79 ~~~~~kDklIG~a~IpL~dL~~ 100 (319)
+. +.+|++||++.|+|.++..
T Consensus 230 d~-~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 230 DC-IGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CS-SSCCEEEEECCCSSCTTCH
T ss_pred CC-CCCCceEEEEEECCccCCc
Confidence 87 6899999999999998754
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.53 E-value=5.4e-16 Score=155.12 Aligned_cols=120 Identities=12% Similarity=0.119 Sum_probs=18.2
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeEEeeecCCCC---CCCeeeEEEEEEeCCCCCCcceEEEEEEec-
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKYCTKIDASGK---ENPVWRTKFAAVVDDSNFQDAALHVEVYSR- 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~kTkV~k~gg---~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~- 78 (319)
.+.|+|+|++|++|+..+ ||||++++++..+.||+++++ + .||+|||+|.|.+... ...|.|+|||+
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~k-t~~glnP~WnE~F~f~~~~~---~~~L~v~V~d~~ 80 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPR-SASGDTVFWGEHFEFNNLPA---VRALRLHLYRDS 80 (483)
T ss_dssp EECC---------------------------------------------------CCEECC-------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeC-CCCCCCCccccEEEEecCCC---ccEEEEEEEecC
Confidence 467999999999998765 999999998776789999875 6 9999999999987543 37799999995
Q ss_pred C--CCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCC----------------------C-ccceEE
Q 020960 79 E--PIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNS----------------------N-KPQGFI 133 (319)
Q Consensus 79 ~--~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~s----------------------g-Kp~G~L 133 (319)
+ ..+.+|++||++.|+|+++..+... ..||.|..... + +..|+|
T Consensus 81 d~~~~~~~d~~lG~v~i~l~~l~~~~~~-----------~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~l 149 (483)
T 3bxj_A 81 DKKRKKDKAGYVGLVTVPVATLAGRHFT-----------EQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAV 149 (483)
T ss_dssp --------------------------CC-----------EECC-------------------------------------
T ss_pred CccccCCCCceEEEEEEEHHHhcCCCCC-----------CeEEECCCCCCccccccccccccccccccccccCCCCCceE
Confidence 2 1147899999999999999865321 34788853221 1 346999
Q ss_pred EEEEEEeec
Q 020960 134 DVSVCISEE 142 (319)
Q Consensus 134 ~lsL~f~~~ 142 (319)
+|.++|.+.
T Consensus 150 rL~v~~~~~ 158 (483)
T 3bxj_A 150 RLKARYQTM 158 (483)
T ss_dssp -CEEEEEEC
T ss_pred EEEEEeeee
Confidence 999999765
No 46
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.46 E-value=2.9e-13 Score=144.44 Aligned_cols=113 Identities=20% Similarity=0.245 Sum_probs=91.5
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCC-----CeEEeeecCCCCCCCeeeE-EEEEE-eCCCCCCcceEEEEE
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPN-----NKYCTKIDASGKENPVWRT-KFAAV-VDDSNFQDAALHVEV 75 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~-----~k~kTkV~k~gg~NPvWNE-tF~f~-V~~~~lq~~~L~VeV 75 (319)
...|+|+|++|++|... +.||||+|++.+. .++||+|+++++.||+||| +|.|. |.... ...|+|+|
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pe--la~Lrf~V 797 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPT--LASLRIAA 797 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGG--GCEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCC--cCEEEEEE
Confidence 35799999999999853 5899999999641 3579999987789999999 69998 75442 36899999
Q ss_pred EecCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCcc--ceEEEEEEEEee
Q 020960 76 YSREPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKP--QGFIDVSVCISE 141 (319)
Q Consensus 76 ~d~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp--~G~L~lsL~f~~ 141 (319)
||++ |++||++.|+|+.|..+.. +..|+. ..|++ .++|.|.|.+..
T Consensus 798 ~D~d-----ddfiG~~~lpL~~L~~GyR--------------~vpL~~-~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 798 FEEG-----GKFVGHRILPVSAIRSGYH--------------YVCLRN-EANQPLCLPALLIYTEASD 845 (885)
T ss_dssp EETT-----TEEEEEEEEETTTCCCEEE--------------EEEEEC-TTSCEEEEEEEEEEEEEEE
T ss_pred EcCC-----ccEEeeEEEEHHHcCCCce--------------EEEecC-CCCCccCceEEEEEEEEEe
Confidence 9965 6899999999999987642 577876 55554 788999888875
No 47
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.45 E-value=5.8e-13 Score=141.17 Aligned_cols=113 Identities=20% Similarity=0.249 Sum_probs=91.5
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCC------CeEEeeecCCCCCCCeeeEE-EEEE-eCCCCCCcceEEEE
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPN------NKYCTKIDASGKENPVWRTK-FAAV-VDDSNFQDAALHVE 74 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~------~k~kTkV~k~gg~NPvWNEt-F~f~-V~~~~lq~~~L~Ve 74 (319)
...|+|+|++|++|... +.||||+|++.+. .++||+|++++|.||+|||+ |.|. |.... ...|+|+
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pe--la~Lrf~ 722 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPD--LAVVRII 722 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGG--GCEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCC--ccEEEEE
Confidence 36899999999999853 5899999999642 46799999887899999998 9998 76543 3689999
Q ss_pred EEecCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCcc--ceEEEEEEEEee
Q 020960 75 VYSREPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKP--QGFIDVSVCISE 141 (319)
Q Consensus 75 V~d~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp--~G~L~lsL~f~~ 141 (319)
|||++ |++||++.|+|+.|..+.. +..|+. .+|++ .++|.|.|.+..
T Consensus 723 V~D~d-----ddfiG~~~ipL~~L~~GyR--------------~vpL~~-~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 723 VSEEN-----GKFIGHRVMPLDGIKPGYR--------------HVPLRN-ESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp EEETT-----SCEEEEEEEESTTCCCEEE--------------EEEEEC-TTSCEEEEEEEEEEEEEEE
T ss_pred EEecC-----CCeeeEEEEEHHHcCCcce--------------EEEEeC-CCCCCCCceEEEEEEEEEe
Confidence 99964 6899999999999988742 677886 56655 367877777765
No 48
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.44 E-value=8.2e-13 Score=139.77 Aligned_cols=112 Identities=20% Similarity=0.256 Sum_probs=89.1
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC-----CCeEEee-ecCCCCCCCeeeE-EEEE-EeCCCCCCcceEEEE
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP-----NNKYCTK-IDASGKENPVWRT-KFAA-VVDDSNFQDAALHVE 74 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~-----~~k~kTk-V~k~gg~NPvWNE-tF~f-~V~~~~lq~~~L~Ve 74 (319)
.+.|+|+|++|++|.. .+.||||+|++.+ ..++||+ ++++++.||+||| +|.| .|.... ...|+|+
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~e--l~~Lr~~ 750 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPE--LASLRVA 750 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGG--GCEEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCC--ccEEEEE
Confidence 4689999999999985 3589999999953 1468999 8887789999999 7999 886543 3689999
Q ss_pred EEecCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCc--cceEEEEEEEEe
Q 020960 75 VYSREPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNK--PQGFIDVSVCIS 140 (319)
Q Consensus 75 V~d~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgK--p~G~L~lsL~f~ 140 (319)
|||++ |++||++.|+|++|..+. .++.|+. ..|. ..+.|.|.|.+.
T Consensus 751 V~D~d-----~d~iG~~~ipl~~L~~G~--------------r~v~L~~-~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 751 VMEEG-----NKFLGHRIIPINALNSGY--------------HHLCLHS-ESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp EEETT-----TEEEEEEEEEGGGBCCEE--------------EEEEEEC-TTCCEEEEEEEEEEEEEE
T ss_pred EEEeC-----CCccceEeeehhhcCCCc--------------EEEeccC-CCCCCCCceEEEEEEEEE
Confidence 99975 699999999999998653 2678876 4454 347777777764
No 49
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.39 E-value=9.3e-13 Score=135.91 Aligned_cols=97 Identities=21% Similarity=0.225 Sum_probs=84.5
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECC----CCeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEec
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDP----NNKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSR 78 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~----~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~ 78 (319)
...|+|+|++|++|...+..++.||||++.+.+ ..++||+++++ ++||+|||+|.|.+..... ...|.|+|||+
T Consensus 171 ~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~-tlnP~wne~f~f~~~~~~~-~~~L~v~v~d~ 248 (674)
T 3pfq_A 171 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKS-SLNPEWNETFRFQLKESDK-DRRLSVEIWDW 248 (674)
T ss_dssp SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSS-CSSCEEEEEEEEECCSTTT-TCEEEEEEEEC
T ss_pred cceeeeeeecccccCCCCcccccCcccccccccCcccccccccccccc-ccCCCccceeeeecccCCc-cceeeeEEeec
Confidence 467999999999999999889999999999932 36789999886 8999999999999976432 46799999999
Q ss_pred CCCCCCCceeEEEEEechhhcccc
Q 020960 79 EPIFLRERLLGTATIALKEFLAKY 102 (319)
Q Consensus 79 ~~~~~kDklIG~a~IpL~dL~~~~ 102 (319)
+. +.+|++||++.|+|+++....
T Consensus 249 d~-~~~dd~iG~~~i~l~~l~~~~ 271 (674)
T 3pfq_A 249 DL-TSRNDFMGSLSFGISELQKAG 271 (674)
T ss_dssp CS-SSCCEECCBCCCBTTHHHHCC
T ss_pred cc-ccccccccccccchhhhccCC
Confidence 97 789999999999999998753
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.17 E-value=4.4e-10 Score=94.33 Aligned_cols=117 Identities=15% Similarity=0.123 Sum_probs=87.2
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEECCCCeE---EeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecC
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWIDPNNKY---CTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSRE 79 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld~~~k~---kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~ 79 (319)
...|+|.+.++..-.-.......||||.|.++..... +|-+.|..|..|+|||+|.-.|.+. ..|.|.|++..
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G----r~l~i~Vfh~a 80 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG----RVIQIVLMRAA 80 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTT----CEEEEEEEEET
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCC----EEEEEEEEcCC
Confidence 4578999988875332221234899999999754333 6634455699999999999999885 88999999876
Q ss_pred CCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccceEEEEEEEEe
Q 020960 80 PIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQGFIDVSVCIS 140 (319)
Q Consensus 80 ~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G~L~lsL~f~ 140 (319)
. ++|+.++|.+.+|..+...++ .. ...|+.|. |+|+|++.+++.
T Consensus 81 ~-----~fvAn~tV~~edL~~~c~~~~-----g~-~e~WvdLe------P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 81 E-----EPVSEVTVGVSVLAERCKKNN-----GK-AEFWLDLQ------PQAKVLMSVQYF 124 (126)
T ss_dssp T-----EEEEEEEEEHHHHHHHHHTTT-----TE-EEEEEECB------SSCEEEEEEEEE
T ss_pred C-----CeeeEEEEEHHHHHhhhccCC-----Cc-eEEEEecc------cCcEEEEEEEEe
Confidence 3 999999999999997743211 12 23588885 799999999986
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.07 E-value=6.3e-10 Score=94.63 Aligned_cols=118 Identities=15% Similarity=0.156 Sum_probs=87.4
Q ss_pred ceEEEEEEEEecCCCCCC-CCCCCCcEEEEEECCCCe---EEe-eecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEe
Q 020960 3 KIWVEVCLISARGLRRSS-SLWKLQWFAVGWIDPNNK---YCT-KIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYS 77 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d-~~gk~DPYV~v~ld~~~k---~kT-kV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d 77 (319)
...|+|.+.+++-..-.. .....||||.|.++.... .+| ...+ .|..|+|||+|.-.|.+. ..|.|.|++
T Consensus 9 ~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~Kk-kT~~P~Wne~Fd~~V~~G----r~l~i~Vfh 83 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKK-PTMYPPWDSTFDAHINKG----RVMQIIVKG 83 (138)
T ss_dssp CCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEE-EEECCCSSSEEEECCCSS----CEEEEEEEC
T ss_pred CcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccC-CCCCccccceEeeeEECC----eEEEEEEEc
Confidence 456899998887644322 112489999999975433 666 4433 489999999999999885 889999997
Q ss_pred cCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCCccceEEEEEEEEeec
Q 020960 78 REPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSNKPQGFIDVSVCISEE 142 (319)
Q Consensus 78 ~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sgKp~G~L~lsL~f~~~ 142 (319)
... ++|+.++|.|.+|..+...++ .. ...|+.|. |+|+|++.|++.-+
T Consensus 84 ~a~-----~fVAn~tV~~edL~~~ck~~~-----g~-~e~WvdLe------P~Gkl~v~i~~~~e 131 (138)
T 2enj_A 84 KNV-----DLISETTVELYSLAERCRKNN-----GK-TEIWLELK------PQGRMLMNARYFLE 131 (138)
T ss_dssp SSC-----SCCEEEEEESHHHHHHHHHTT-----TC-EEEEEECB------SSCEEEEEEEECCC
T ss_pred CCC-----CeeeEEEEEHHHHHhhhccCC-----Cc-eEEEEecc------cCcEEEEEEEEEEe
Confidence 652 999999999999997632211 12 23588885 79999999999733
No 52
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=96.94 E-value=0.0041 Score=53.80 Aligned_cols=128 Identities=11% Similarity=0.045 Sum_probs=88.9
Q ss_pred ceEEEEEEEEecCCCCC-CCCCCCC--cEEEEEECCCCeEEeeecCCCCCCCeeeEEEEEEeCCCC-----CCcceEEEE
Q 020960 3 KIWVEVCLISARGLRRS-SSLWKLQ--WFAVGWIDPNNKYCTKIDASGKENPVWRTKFAAVVDDSN-----FQDAALHVE 74 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~-d~~gk~D--PYV~v~ld~~~k~kTkV~k~gg~NPvWNEtF~f~V~~~~-----lq~~~L~Ve 74 (319)
.+.+||.|.+++-=... ...+..+ .||++.+..=+.++|.+.+ +.+|.+|.+-.+.|+... +++..|.||
T Consensus 17 EnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~--G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lE 94 (156)
T 2yrb_A 17 ENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR--GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLE 94 (156)
T ss_dssp CEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE--SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEE
T ss_pred CcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc--CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEE
Confidence 46899999998731110 0012234 4555555556788999886 689999999999886532 356789999
Q ss_pred EEecCCCCCCCceeEEEEEechhhcccccCCCCCCCCCccceEEEEeEeCCCC--ccceEEEEEEEEeecCCC
Q 020960 75 VYSREPIFLRERLLGTATIALKEFLAKYSKNSEGSRSGIEEVGSYQLRKKNSN--KPQGFIDVSVCISEEREE 145 (319)
Q Consensus 75 V~d~~~~~~kDklIG~a~IpL~dL~~~~~~~~~~~~~~~~~~~sy~Lrr~~sg--Kp~G~L~lsL~f~~~~~~ 145 (319)
++.... ..-+.||+++|+|++|+..... . .-...|.. ..+ ..-|.|.+.|++.-..++
T Consensus 95 Lhqa~g--~~~~tla~~~I~l~~lLe~~~~--------i--~g~~~L~g-~~g~~~~~G~LeywiRL~~Pi~~ 154 (156)
T 2yrb_A 95 VHQAYS--TEYETIAACQLKFHEILEKSGR--------I--FCTASLIG-TKGDIPNFGTVEYWFRLRVSGPS 154 (156)
T ss_dssp EEEECS--SCEEEEEEEEECCSHHHHCCSC--------E--EEEEEECB-SSSCCTTSEEEEEEEEEEECCCC
T ss_pred EEEeeC--CCceEEEEEEEEhHHhhCcCCc--------e--EEEEEEEc-CCCCcceEEEEEEEEEEecccCC
Confidence 988753 4667999999999999976321 1 11335554 455 468999999999876554
No 53
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=95.47 E-value=0.27 Score=44.58 Aligned_cols=60 Identities=15% Similarity=0.218 Sum_probs=43.3
Q ss_pred CeEEeeecCCCCCCCeeeEEEEEEeCCCCCCcceEEEEEEecCCCC---CCCceeEEEEEechh
Q 020960 37 NKYCTKIDASGKENPVWRTKFAAVVDDSNFQDAALHVEVYSREPIF---LRERLLGTATIALKE 97 (319)
Q Consensus 37 ~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq~~~L~VeV~d~~~~~---~kDklIG~a~IpL~d 97 (319)
..++|.|.- ...+|.|+|+|.+.|.....+..-|.|+++++.... ..++.+|.+-+||-+
T Consensus 77 se~~S~V~Y-Hnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYY-QVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCT-TCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEE-cCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 455676654 378999999999999876566788999998764211 123578888888754
No 54
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=92.93 E-value=1.6 Score=47.80 Aligned_cols=94 Identities=13% Similarity=0.029 Sum_probs=58.9
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEC-C-C---CeEEeeecCCCCCCCeeeEEEEEEeCCCCCC-cceEEEEEE
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWID-P-N---NKYCTKIDASGKENPVWRTKFAAVVDDSNFQ-DAALHVEVY 76 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld-~-~---~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq-~~~L~VeV~ 76 (319)
.+.+.|+|+++.++.-. .....+-||++.+. + + ...+|+.+ ...++.|||.+.|.+.-..+. ...|.|.||
T Consensus 354 ~~~f~v~i~~~~~~n~~-~~~~~~~~V~~~l~hG~~~L~~~~~T~~~--~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~ 430 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVN-IRDIDKIYVRTGIYHGGEPLCDNVNTQRV--PCSNPRWNEWLNYDIYIPDLPRAARLCLSIC 430 (1091)
T ss_dssp CSEEEEEEEEESCCCCC-CSSCCCCCEEEEEESSSCSSCCEECCCCC--CTTSCEEEEEEEEEEEGGGCCTTCEEEEEEC
T ss_pred CCCEEEEEEEecCCCCC-ccccceEEEEEEEEECCEEccCceecccc--CCCCCCCCeeEEecCccccCChhcEEEEEEE
Confidence 35789999999988632 22246789998884 2 2 22334432 256888999999887533322 478999999
Q ss_pred ecCCCC---CCCceeEEEEEechhhc
Q 020960 77 SREPIF---LRERLLGTATIALKEFL 99 (319)
Q Consensus 77 d~~~~~---~kDklIG~a~IpL~dL~ 99 (319)
+..... .+...||.+.++|=|..
T Consensus 431 ~~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 431 SVKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCCC-------CCEEEEEESBCTT
T ss_pred EecCccCcccccceeEEeeeeeEccC
Confidence 865310 12346777777766543
No 55
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=91.55 E-value=0.63 Score=50.26 Aligned_cols=73 Identities=14% Similarity=0.175 Sum_probs=48.1
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEC-CC----CeEEeeecCCCCCCCeeeEEEEEEeCCCCCC-cceEEEEEE
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWID-PN----NKYCTKIDASGKENPVWRTKFAAVVDDSNFQ-DAALHVEVY 76 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld-~~----~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq-~~~L~VeV~ 76 (319)
...|.|+|.++.++... ...+-||++.+. +. ...+|+.+. ...++.|||.+.|.+.-..+. ...|.|+||
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~-~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVN-VCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEE-SCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceeccccc-CCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 35789999999988643 346889888884 22 122343222 257899999999877533222 478999999
Q ss_pred ecC
Q 020960 77 SRE 79 (319)
Q Consensus 77 d~~ 79 (319)
+..
T Consensus 292 ~~~ 294 (940)
T 2wxf_A 292 AVV 294 (940)
T ss_dssp EEC
T ss_pred Eec
Confidence 853
No 56
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=83.13 E-value=1 Score=49.44 Aligned_cols=73 Identities=12% Similarity=0.162 Sum_probs=47.8
Q ss_pred ceEEEEEEEEecCCCCCCCCCCCCcEEEEEEC-CC----CeEEeeecCCCCCCCeeeEEEEEEeCCCCCC-cceEEEEEE
Q 020960 3 KIWVEVCLISARGLRRSSSLWKLQWFAVGWID-PN----NKYCTKIDASGKENPVWRTKFAAVVDDSNFQ-DAALHVEVY 76 (319)
Q Consensus 3 ~~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld-~~----~k~kTkV~k~gg~NPvWNEtF~f~V~~~~lq-~~~L~VeV~ 76 (319)
...+.|+|.++.+|... ...+-||++.+. +. ...+|+.+. ...++.|||.+.|.+.-..+. ...|.|+||
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~-~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEIS-GKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCC-SSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceeccccc-CCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 35789999999888643 235777776663 22 122343322 357899999998887543332 578999999
Q ss_pred ecC
Q 020960 77 SRE 79 (319)
Q Consensus 77 d~~ 79 (319)
+..
T Consensus 428 ~~~ 430 (1092)
T 2y3a_A 428 AVL 430 (1092)
T ss_dssp CC-
T ss_pred Eec
Confidence 863
No 57
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=82.96 E-value=3.1 Score=45.02 Aligned_cols=74 Identities=14% Similarity=0.073 Sum_probs=44.9
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCcEEEEEEC-CCC-e--EEeeecCCCCCCCeeeEEEEEEeCCCCCC-cceEEEEEEec
Q 020960 4 IWVEVCLISARGLRRSSSLWKLQWFAVGWID-PNN-K--YCTKIDASGKENPVWRTKFAAVVDDSNFQ-DAALHVEVYSR 78 (319)
Q Consensus 4 ~~LeVtViSAr~Lk~~d~~gk~DPYV~v~ld-~~~-k--~kTkV~k~gg~NPvWNEtF~f~V~~~~lq-~~~L~VeV~d~ 78 (319)
..++|+|+.+...... .....+-||++.+. +.. . .+|+-+ .-..++.|||.+.|.+.-..+. ...|.|+||+.
T Consensus 218 ~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~-~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPK-PFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp SEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCE-ECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred CceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeecc-ccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 5688999988642211 11246888888774 321 1 223322 1256799999988876433222 47899999974
Q ss_pred C
Q 020960 79 E 79 (319)
Q Consensus 79 ~ 79 (319)
.
T Consensus 296 ~ 296 (961)
T 1e7u_A 296 A 296 (961)
T ss_dssp E
T ss_pred c
Confidence 3
No 58
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=71.40 E-value=9.8 Score=32.51 Aligned_cols=95 Identities=12% Similarity=0.024 Sum_probs=57.3
Q ss_pred eEEEEEEEEecCCCCCCCCCCCCcEEEEEE-CCC-----CeEEeeec-CCCCCCCeeeEEEEEEeCCCC-CCcceEEEEE
Q 020960 4 IWVEVCLISARGLRRSSSLWKLQWFAVGWI-DPN-----NKYCTKID-ASGKENPVWRTKFAAVVDDSN-FQDAALHVEV 75 (319)
Q Consensus 4 ~~LeVtViSAr~Lk~~d~~gk~DPYV~v~l-d~~-----~k~kTkV~-k~gg~NPvWNEtF~f~V~~~~-lq~~~L~VeV 75 (319)
..|.|.|.+- +||+.. .-.|||++|++ |.+ ..+.|.+. +.++..=.||.++++...-.. .+...+.||+
T Consensus 14 t~l~v~Ie~i-glkda~--~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aivfEl 90 (152)
T 2qzq_A 14 TLLTLTIEKI-GLKDAG--QCIDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFFEF 90 (152)
T ss_dssp CEEEEEEEEE-ECTTGG--GCEEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEEEEE
T ss_pred eEEEEEEEEE-EeCCHH--HccCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEEEEE
Confidence 3466766665 787653 33799999999 321 34556554 122344567765555432111 2257789999
Q ss_pred EecCCCCCCCceeEEEEEechhhccc
Q 020960 76 YSREPIFLRERLLGTATIALKEFLAK 101 (319)
Q Consensus 76 ~d~~~~~~kDklIG~a~IpL~dL~~~ 101 (319)
.+......+-...+.+-+.++++..+
T Consensus 91 kH~k~kkkk~S~kCw~f~~~d~i~~g 116 (152)
T 2qzq_A 91 KHYKPKKRFTSTKCFAFMEMDEIKPG 116 (152)
T ss_dssp EEEETTTTEEEEEEEEEEEGGGCCSE
T ss_pred EEecccceeeeeeeEEEEEhhhcccC
Confidence 98765222333678888888887664
No 59
>3heq_A Major prion protein; cell membrane, disease mutation, disulfide bond, glycoprotein, golgi apparatus, GPI-anchor, lipoprotein, membrane, polymorphism; 1.80A {Homo sapiens} PDB: 2lsb_A 2k1d_A 2lej_A 2lv1_A 2lft_A 1fkc_A 1fo7_A 3haf_A 3hj5_A 1qm0_A 1qm1_A 2kun_A 3hes_A 3her_A 1b10_A 2joh_A 2fj3_A 2jom_A 2l1h_A 2l39_A ...
Probab=29.63 E-value=18 Score=30.20 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=5.3
Q ss_pred Cccccccchhhhhccc--eeecccCCCCC
Q 020960 274 PGFGMGVGAGALAAGA--VIFGDDFMSGF 300 (319)
Q Consensus 274 ~~~~~g~gag~~~a~~--~~~g~~~~~g~ 300 (319)
-+.|++++|||+|-|+ -+.|. +|||.
T Consensus 21 k~vAgaAaAGAVvGGlgGy~lG~-amsrp 48 (142)
T 3heq_A 21 KHMAGAAAAGAVVGGLGGYMLGS-AMSRP 48 (142)
T ss_dssp ----------------CCCEECC-CCCCC
T ss_pred HHHHHHHHhhhhhhccchHHHHh-hccCC
Confidence 4678889999986443 35555 56653
No 60
>1wa7_B TIP, hypothetical 28.7 kDa protein in DHFR 3'region (ORF1); SH3 domain, ligand, tyrosine kinase, signal transduction, LYN; NMR {Saimiriine herpesvirus 2}
Probab=29.10 E-value=41 Score=20.25 Aligned_cols=13 Identities=54% Similarity=1.191 Sum_probs=7.2
Q ss_pred CCCCCCCC-CCCCC
Q 020960 231 RTPPPPPP-PVNVG 243 (319)
Q Consensus 231 ~~p~~~~~-~~~~~ 243 (319)
+.||+.|| |-|-|
T Consensus 5 ~P~P~LPpRPaNLG 18 (26)
T 1wa7_B 5 MPTPPLPPRPANLG 18 (26)
T ss_dssp CCCCCCCCCTTSTT
T ss_pred CCCCCCCCCccccc
Confidence 44555555 66654
No 61
>1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A
Probab=28.35 E-value=19 Score=32.45 Aligned_cols=11 Identities=18% Similarity=0.368 Sum_probs=6.6
Q ss_pred hhccceeecccC
Q 020960 285 LAAGAVIFGDDF 296 (319)
Q Consensus 285 ~~a~~~~~g~~~ 296 (319)
|++||+| |+.|
T Consensus 113 ~LGGalL-G~a~ 123 (219)
T 1dx0_A 113 GLGGYML-GSAM 123 (219)
T ss_dssp CCCSCEE-CCCC
T ss_pred hhhhhhh-hccc
Confidence 4566666 6654
No 62
>1tpx_A Prion protein, major prion protein; antibody, unknown function; 2.56A {Ovis aries} SCOP: d.6.1.1
Probab=26.43 E-value=22 Score=29.23 Aligned_cols=25 Identities=28% Similarity=0.352 Sum_probs=8.8
Q ss_pred ccccchhhhh--ccceeecccCCCCCCc
Q 020960 277 GMGVGAGALA--AGAVIFGDDFMSGFDV 302 (319)
Q Consensus 277 ~~g~gag~~~--a~~~~~g~~~~~g~~~ 302 (319)
|=+++|||+| +|.-+.|. +|||.++
T Consensus 3 agaaaaGAvvGgl~Gy~lg~-a~~r~~~ 29 (121)
T 1tpx_A 3 AGAAAAGAVVGGLGGYMLGS-AMSRPLI 29 (121)
T ss_dssp -----------CCTTCEECC-CCCCCCC
T ss_pred chhHHHhHHhhcchhHHHHh-cccCCCC
Confidence 3456666663 33345565 7887655
No 63
>2lbg_A Major prion protein; conserved hydrophobic region, membrane protei; NMR {Homo sapiens}
Probab=24.98 E-value=12 Score=23.00 Aligned_cols=10 Identities=80% Similarity=1.016 Sum_probs=5.4
Q ss_pred hhhhhcccee
Q 020960 282 AGALAAGAVI 291 (319)
Q Consensus 282 ag~~~a~~~~ 291 (319)
+||.|||||.
T Consensus 4 ~ga~AAGaVv 13 (27)
T 2lbg_A 4 AGAAAAGAVV 13 (27)
T ss_dssp HHHHHHHHHH
T ss_pred hhhhhhhhhh
Confidence 4555555553
Done!