BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020964
(319 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Z9H|A Chain A, Microsomal Prostaglandin E Synthase Type-2
pdb|1Z9H|B Chain B, Microsomal Prostaglandin E Synthase Type-2
pdb|1Z9H|C Chain C, Microsomal Prostaglandin E Synthase Type-2
pdb|1Z9H|D Chain D, Microsomal Prostaglandin E Synthase Type-2
pdb|2PBJ|A Chain A, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
pdb|2PBJ|B Chain B, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
pdb|2PBJ|C Chain C, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
pdb|2PBJ|D Chain D, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
Length = 290
Score = 230 bits (587), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 126/274 (45%), Positives = 164/274 (59%), Gaps = 46/274 (16%)
Query: 87 EVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMV-DGE--- 142
++ LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+ +GE
Sbjct: 14 QLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVLRAEIKFSSYRKVPILVAQEGESSQ 73
Query: 143 QLVDSSAIIDQLDQKLT------------PKRKADSPSGDD------------------- 171
QL DSS II L L P KA + G +
Sbjct: 74 QLNDSSVIISALKTYLVSGQPLEEIITYYPAMKAVNDQGKEVTEFGNKYWLMLNEKEAQQ 133
Query: 172 ---------EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKY 222
EE KWR W D+ LVHL+SPN+YR +EAL SFDYI G F E AKY
Sbjct: 134 VYSGKEARTEEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGAVEGAVAKY 193
Query: 223 AGAAAMYFVSKKLKKKYNITDE-RAALYEAAETWVDALN-GREFLGGSKPNLADLAVFGV 280
GAAAMY +SK+LK ++ + D R LYEAA+ WV A+ R F+GG KPNLADLAV+GV
Sbjct: 194 MGAAAMYLISKRLKSRHRLQDNVREDLYEAADKWVAAVGKDRPFMGGQKPNLADLAVYGV 253
Query: 281 LRPIRYLRSGRDMVEHTRIGEWYTRMERVVGESS 314
LR + L + D+++HT I WY R+ER + E+S
Sbjct: 254 LRVMEGLDAFDDLMQHTHIQPWYLRVERAITEAS 287
>pdb|1G7O|A Chain A, Nmr Solution Structure Of Reduced E. Coli Glutaredoxin 2
Length = 215
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 90 LYQYEACPFCNKVKAFLDYYDIPYKV-VEVNPINKKEIKWSEYKKVPILMVDGEQLVDSS 148
LY Y+ CP+C K + +IP ++ V +N + + K+VPIL D + + S
Sbjct: 3 LYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSRYMPES 62
Query: 149 AII----DQLDQK--LTPKRKADSPSGDDEEKKWRGWVDNHLVHLLSPNIYRNTSEALES 202
I D+LD K LT KR SP+ ++ +K G+ + LL P R A +
Sbjct: 63 MDIVHYVDKLDGKPLLTGKR---SPAIEEWLRKVNGYANK----LLLP---RFAKSAFDE 112
Query: 203 FDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNITDERAAL 248
F T + F +K A A + S L K NI+D+ AL
Sbjct: 113 FS--TPAARKYFVDKKEASAGNFADLLAHSDGLIK--NISDDLRAL 154
>pdb|4G10|A Chain A, Ligg From Sphingobium Sp. Syk-6 Is Related To The
Glutathione Transferase Omega Class
Length = 265
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 85 PKEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYK-----KVPILMV 139
P+E+ +Y CPF +V+ L+ + K VE++ I+K W K +P+L V
Sbjct: 4 PQELTIYHIPGCPFSERVEIXLELKGLRXKDVEID-ISKPRPDWLLAKTGGTTALPLLDV 62
Query: 140 D-GEQLVDSSAIIDQLDQK 157
+ GE L +S I+ L+Q+
Sbjct: 63 ENGESLKESXVILRYLEQR 81
>pdb|2E7P|A Chain A, Crystal Structure Of The Holo Form Of Glutaredoxin C1 From
Populus Tremula X Tremuloides
pdb|2E7P|B Chain B, Crystal Structure Of The Holo Form Of Glutaredoxin C1 From
Populus Tremula X Tremuloides
pdb|2E7P|C Chain C, Crystal Structure Of The Holo Form Of Glutaredoxin C1 From
Populus Tremula X Tremuloides
pdb|2E7P|D Chain D, Crystal Structure Of The Holo Form Of Glutaredoxin C1 From
Populus Tremula X Tremuloides
Length = 116
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKE------IKWSEYKKVPILMVDG 141
VV++ C +CN+VK L YKVVE++ ++ W+ VP + + G
Sbjct: 22 VVVFSKTYCGYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRGTVPNVFIGG 81
Query: 142 EQLVDSSAIIDQ 153
+Q+ ++++
Sbjct: 82 KQIGGCDTVVEK 93
>pdb|1Z7P|A Chain A, Solution Structure Of Reduced Glutaredoxin C1 From Populus
Tremula X Tremuloides
pdb|1Z7R|A Chain A, Solution Structure Of Reduced Glutaredoxin C1 From Populus
Tremula X Tremuloides
Length = 117
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKE------IKWSEYKKVPILMVDG 141
VV++ C +CN+VK L YKVVE++ ++ W+ VP + + G
Sbjct: 23 VVVFSKTYCGYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRGTVPNVFIGG 82
Query: 142 EQLVDSSAIIDQ 153
+Q+ ++++
Sbjct: 83 KQIGGCDTVVEK 94
>pdb|3IR4|A Chain A, 1.2 Angstrom Crystal Structure Of The Glutaredoxin 2
(Grxb) From Salmonella Typhimurium In Complex With
Glutathione
Length = 218
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
Query: 90 LYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKE----IKWSEYKKVPILMVDGEQLV 145
LY Y+ CPFC K + +IP VE+N + + + K VPIL D + +
Sbjct: 6 LYIYDHCPFCVKARXIFGLKNIP---VELNVLQNDDEATPTRXIGQKXVPILQKDDSRYL 62
Query: 146 DSSAII----DQLDQK--LTPKRKADSPSGDDEEKKWRGWVDNHLV 185
S I D LD K LT KR +P+ ++ +K G+V+ L+
Sbjct: 63 PESXDIVHYVDNLDGKPLLTGKR---NPAIEEWLRKVNGYVNQLLL 105
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVN------PINKKEIKWSEYKKVPILMVDG 141
V+L+ CP+C KVK L I + +E++ I K +S+ + VP + V G
Sbjct: 20 VILFSKTTCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVPQMFVRG 79
Query: 142 EQLVDSSAII 151
+ + DS ++
Sbjct: 80 KFIGDSQTVL 89
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 36.2 bits (82), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVN------PINKKEIKWSEYKKVPILMVDG 141
V+L+ CP+C KVK L I + +E++ I K +S+ + VP + V G
Sbjct: 20 VILFSKTTCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVPQMFVRG 79
Query: 142 EQLVDSSAII 151
+ + DS ++
Sbjct: 80 KFIGDSQTVL 89
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVN------PINKKEIKWSEYKKVPILMVDG 141
V+L+ CP+C KVK L I + +E++ I K +S+ + VP + V G
Sbjct: 20 VILFSKTTCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVPQMFVRG 79
Query: 142 EQLVDSSAII 151
+ + DS ++
Sbjct: 80 KFIGDSQTVL 89
>pdb|4J2F|A Chain A, Crystal Structure Of A Glutathione Transferase Family
Member From Ricinus Communis, Target Efi-501866
Length = 223
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 97 PFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWS---EYKKVPILMVDGEQLVDSSAIIDQ 153
PF +V L IPY+ VE + NK + +KK+P+L+ G+ + +S+ I++
Sbjct: 14 PFSCRVIWALKLKGIPYEYVEEDLFNKSPLLLQYNPVHKKIPVLVHGGKPICESTIILEY 73
Query: 154 LDQKLTPKRKADSPSGDDEEKKWRGWV---DNHLVHLLSPNIYRNTSEALE 201
LD+ T PS E R WV ++ + NI+R E LE
Sbjct: 74 LDE--TWPENPLLPSDPHERAVARFWVKFIEDKGTAIW--NIFRTKGEELE 120
>pdb|3UBK|A Chain A, Crystal Structure Of Glutathione Transferase (Target
Efi-501770) From Leptospira Interrogans
pdb|3UBK|B Chain B, Crystal Structure Of Glutathione Transferase (Target
Efi-501770) From Leptospira Interrogans
pdb|3UBL|A Chain A, Crystal Structure Of Glutathione Transferase (Target
Efi-501770) From Leptospira Interrogans With Gsh Bound
pdb|3UBL|B Chain B, Crystal Structure Of Glutathione Transferase (Target
Efi-501770) From Leptospira Interrogans With Gsh Bound
Length = 242
Score = 34.7 bits (78), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 98 FCNKVKAFLDYYDIPYKVVEVNPINKKE-IKWSEYKKVPILMVDGEQLVDSSAIIDQLDQ 156
+ NKVK + + Y+ + + P +++ +K S K+P+L +DG+ + +S AI++ LD
Sbjct: 14 YVNKVKLGILEKGLEYEQIRIAPSQEEDFLKISPMGKIPVLEMDGKFIFESGAILEFLDT 73
Query: 157 KL--TPKRKADSP 167
TPK + P
Sbjct: 74 IFPQTPKLIPEDP 86
>pdb|3TOT|A Chain A, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000
pdb|3TOT|B Chain B, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000
pdb|3TOU|A Chain A, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000 With Gsh
Bound
pdb|3TOU|B Chain B, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000 With Gsh
Bound
Length = 226
Score = 34.3 bits (77), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 85/223 (38%), Gaps = 47/223 (21%)
Query: 95 ACPFCNKVKAFLDYYDIPYKVV--EVNPINKKEIKWSEYKKVPILMV-DGEQLVDSSAII 151
A P+ KV+ L I Y+ V +V + + +++ KVP L++ DG L DS I
Sbjct: 10 ASPYTRKVRVVLAEKKIDYQFVLEDVWNADTQIHQFNPLGKVPCLVMDDGGALFDSRVIA 69
Query: 152 DQLDQKLTPKRKADSPSGDD--EEKKWRGWVDNHL---VHLLSPNIYRNTSEALESFDYI 206
+ D L+P + PSG + E + W D L V L R + ES+
Sbjct: 70 EYAD-TLSPVARLIPPSGRERVEVRCWEALADGLLDAAVALRVEQTQRTPEQRSESW--- 125
Query: 207 TSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNITDERAALYEAAETWVDALNGREFLG 266
IT + + EA + L R +
Sbjct: 126 ----------------------------------ITRQHHKIDEALKAMSRGLADRTWCN 151
Query: 267 GSKPNLADLAVFGVLRPIRYLRSGRDMVE-HTRIGEWYTRMER 308
G+ LAD+AV L + + + D E H + +YTR+E+
Sbjct: 152 GNHLTLADIAVGCALAYLDFRQPQVDWREQHANLAAFYTRIEK 194
>pdb|1FOV|A Chain A, Glutaredoxin 3 From Escherichia Coli In The Fully Oxidized
Form
Length = 82
Score = 33.5 bits (75), Expect = 0.15, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEV--NPINKKE-IKWSEYKKVPILMVDGEQL 144
V +Y E CP+C++ KA L + ++ + + N ++E IK S VP + +D + +
Sbjct: 3 VEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQHI 62
>pdb|2HRK|A Chain A, Structural Basis Of Yeast Aminoacyl-Trna Synthetase
Complex Formation Revealed By Crystal Structures Of Two
Binary Sub- Complexes
pdb|2HSM|A Chain A, Structural Basis Of Yeast Aminoacyl-Trna Synthetase
Complex Formation Revealed By Crystal Structures Of Two
Binary Sub- Complexes
Length = 207
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 235 LKKKYNITDERAALYEAAETWVDALNGREF-LGGSKPNLADLAVFGVLRPIRYLRSGRDM 293
L +K + A L ++ ET LN R F LGG K + AD+A +G LR S
Sbjct: 97 LAQKELVIKNFAKLSQSLETLDSQLNLRTFILGGLKYSAADVACWGALRSNGMCGSIIKN 156
Query: 294 VEHTRIGEWYT--RMERVVGES 313
+ WYT M+ + GE+
Sbjct: 157 KVDVNVSRWYTLLEMDPIFGEA 178
>pdb|3NIV|A Chain A, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|B Chain B, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|C Chain C, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|D Chain D, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
Length = 222
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWS-EYKK------VPILMVD 140
++LY Y C +V+ L+ I Y+ +EV+ +N + S +Y + VP L ++
Sbjct: 3 LILYDYFRSTACYRVRIALNLKKIAYEKIEVHLVNNGGEQHSLQYHQINPQELVPSLDIN 62
Query: 141 GEQLVDSSAIIDQLDQ 156
G+ L S AIID L++
Sbjct: 63 GQILSQSXAIIDYLEE 78
>pdb|2HRA|A Chain A, Crystal Structures Of The Interacting Domains From Yeast
Glutamyl-Trna Synthetase And Trna Aminoacylation And
Nuclear Export Cofactor Arc1p Reveal A Novel Function
For An Old Fold
pdb|2HRA|B Chain B, Crystal Structures Of The Interacting Domains From Yeast
Glutamyl-Trna Synthetase And Trna Aminoacylation And
Nuclear Export Cofactor Arc1p Reveal A Novel Function
For An Old Fold
Length = 209
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 235 LKKKYNITDERAALYEAAETWVDALNGREF-LGGSKPNLADLAVFGVLRPIRYLRSGRDM 293
L +K + A L ++ ET LN R F LGG K + AD+A +G LR S
Sbjct: 99 LAQKELVIKNFAKLSQSLETLDSQLNLRTFILGGLKYSAADVACWGALRSNGMCGSIIKN 158
Query: 294 VEHTRIGEWYT--RMERVVGES 313
+ WYT M+ + GE+
Sbjct: 159 KVDVNVSRWYTLLEMDPIFGEA 180
>pdb|3RBT|A Chain A, Crystal Structure Of Glutathione S-Transferase Omega 3
From The Silkworm Bombyx Mori
pdb|3RBT|B Chain B, Crystal Structure Of Glutathione S-Transferase Omega 3
From The Silkworm Bombyx Mori
pdb|3RBT|C Chain C, Crystal Structure Of Glutathione S-Transferase Omega 3
From The Silkworm Bombyx Mori
pdb|3RBT|D Chain D, Crystal Structure Of Glutathione S-Transferase Omega 3
From The Silkworm Bombyx Mori
Length = 246
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 79 LPTDLVPKEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYK----KV 134
+P + ++ LY + P+ ++V L+ I Y+V ++P+ E W K K+
Sbjct: 18 IPPPALTDKLRLYHVDMNPYGHRVLLVLEAKRIKYEVYRLDPLRLPE--WFRAKNPRLKI 75
Query: 135 PILMVDGEQ----LVDSSAIIDQLDQKLT 159
P+L + +Q L +S I D LD+K T
Sbjct: 76 PVLEIPTDQGDRFLFESVVICDYLDEKYT 104
>pdb|1GWC|A Chain A, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
pdb|1GWC|B Chain B, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
pdb|1GWC|C Chain C, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
Length = 230
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 97 PFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSE---YKKVPILMVDGEQLVDSSAIIDQ 153
PF +VK L + Y+ VE + K E+ +KK+P+L+ +G + +S I+
Sbjct: 16 PFVTRVKLALALKGLSYEDVEEDLYKKSELLLKSNPVHKKIPVLIHNGAPVCESMIILQY 75
Query: 154 LDQKLTPKRKADSPSGDDEE---KKWRGWVDNHLV 185
+D+ + P+ E + W +VD+ LV
Sbjct: 76 IDEVFASTGPSLLPADPYERAIARFWVAYVDDKLV 110
>pdb|1IVH|A Chain A, Structure Of Human Isovaleryl-coa Dehydrogenase At 2.6
Angstroms Resolution: Structural Basis For Substrate
Specificity
pdb|1IVH|B Chain B, Structure Of Human Isovaleryl-coa Dehydrogenase At 2.6
Angstroms Resolution: Structural Basis For Substrate
Specificity
pdb|1IVH|C Chain C, Structure Of Human Isovaleryl-coa Dehydrogenase At 2.6
Angstroms Resolution: Structural Basis For Substrate
Specificity
pdb|1IVH|D Chain D, Structure Of Human Isovaleryl-coa Dehydrogenase At 2.6
Angstroms Resolution: Structural Basis For Substrate
Specificity
Length = 394
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 272 LADLAVFGVLRPIRYLRSGRDMVEHTRIGEWYTRMERVVGES 313
L +L V G+ P++Y SG +EH + E +R VG S
Sbjct: 55 LGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLS 96
>pdb|2M46|A Chain A, Solution Nmr Structure Of Sacol0876 From Staphylococcus
Aureus Col, Nesg Target Zr353 And Csgid Target Idp00841
Length = 142
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEV 118
+ YQY+ C C K FLD Y + Y+ +++
Sbjct: 26 IKFYQYKNCTTCKKAAKFLDEYGVSYEPIDI 56
>pdb|2KLX|A Chain A, Solution Structure Of Glutaredoxin From Bartonella
Henselae Str. Houston
Length = 89
Score = 32.3 bits (72), Expect = 0.41, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 86 KEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEI 126
KE++LY CP+C + + LD + Y ++ + ++E+
Sbjct: 6 KEIILYTRPNCPYCKRARDLLDKKGVKYTDIDASTSLRQEM 46
>pdb|1WJK|A Chain A, Solution Structure Of Hypothetical Protein C330018d20rik
From Mus Musculus
Length = 100
Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKK--VPILMVDGEQLV 145
+ L+ CP C++ K L Y + + EV+ + W E K +P+ ++G+ L+
Sbjct: 19 LTLFTKAPCPLCDEAKEVLQPYKDRFILQEVDITLPENSTWYERYKFDIPVFHLNGQFLM 78
Query: 146 DSSAIIDQLDQKLTPKRKADSPSG 169
+L+++L RK PS
Sbjct: 79 MHRVNTSKLEKQL---RKLSGPSS 99
>pdb|4G9H|A Chain A, Crystal Structure Of Glutahtione S-Transferase Homolog
From Yersinia Pestis, Target Efi-501894, With Bound
Glutathione
pdb|4G9H|B Chain B, Crystal Structure Of Glutahtione S-Transferase Homolog
From Yersinia Pestis, Target Efi-501894, With Bound
Glutathione
pdb|4GCI|A Chain A, Crystal Structure Of Glutahtione S-Transferase Homolog
From Yersinia Pestis, Target Efi-501894, With Bound
Glutathione, Monoclinic Form
pdb|4GCI|B Chain B, Crystal Structure Of Glutahtione S-Transferase Homolog
From Yersinia Pestis, Target Efi-501894, With Bound
Glutathione, Monoclinic Form
Length = 211
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 25/182 (13%)
Query: 89 VLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEY------KKVPILMVD-G 141
+ Y+ AC + L + + + V+ + KK ++Y +VP L++D G
Sbjct: 6 LFYKPGACSLSPHI--VLREAGLDFSIERVDLVTKKTETGADYLSINPKGQVPALVLDDG 63
Query: 142 EQLVDSSAIIDQLDQKLTPKRKADSPSGDD---EEKKWRGWVDNHLVHLLSPNIYRNTSE 198
L + AI+ L K+ P R +PSG +W ++ L SP NT +
Sbjct: 64 SLLTEGVAIVQYLADKV-PDRHLIAPSGTLSRYHAIEWLNFIATELHKGFSPLFNPNTPD 122
Query: 199 ALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNITDERAALYEAAETWVDA 258
++ FS+ + + A++ L KK+++ D A L+ + W +A
Sbjct: 123 EYKTIVRERLDKQFSYVDSVLAEH---------DYLLGKKFSVAD--AYLFTVSR-WANA 170
Query: 259 LN 260
LN
Sbjct: 171 LN 172
>pdb|3IC8|A Chain A, The Crystal Structure Of A Gst-Like Protein From
Pseudomonas Syringae To 2.4a
pdb|3IC8|B Chain B, The Crystal Structure Of A Gst-Like Protein From
Pseudomonas Syringae To 2.4a
pdb|3IC8|C Chain C, The Crystal Structure Of A Gst-Like Protein From
Pseudomonas Syringae To 2.4a
pdb|3IC8|D Chain D, The Crystal Structure Of A Gst-Like Protein From
Pseudomonas Syringae To 2.4a
Length = 310
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 20/197 (10%)
Query: 87 EVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKE---IKWSEYKKVPILMVDGEQ 143
E++L+ Y F K + L + + ++ V + I K Y+K P+L + +
Sbjct: 3 ELILHHYPTSLFAEKARLXLGFKGVNWRSVTIPSIXPKPDLTALTGGYRKTPVLQIGADI 62
Query: 144 LVDSSAIIDQLDQ-KLTPKRKADSPSGDD-EEKKWRGWVDNHL-VHLLSPNIYRNTSEAL 200
D++ +L+Q K +P A P G + W D+ L +H +S +++ S A+
Sbjct: 63 YCDTALXARRLEQEKASP---AFYPQGQEFAVAGLAAWADSVLFLHAVS-LVFQPESXAV 118
Query: 201 ESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNITDERAALYEAAETWVDALN 260
F + +F + + G A +++K ++ R E+ + +
Sbjct: 119 R-FAKVPPDAAKAFIADRSXLFNGGTASRPPVEQVKHQWPTFXSR------LESQLS--H 169
Query: 261 GREFLGGSKPNLADLAV 277
G +FL G+ P++AD +V
Sbjct: 170 GGDFLFGA-PSIADFSV 185
>pdb|4HI7|A Chain A, Crystal Structure Of Glutathione Transferase Homolog From
Drosophilia Mojavensis, Target Efi-501819, With Bound
Glutathione
pdb|4HI7|B Chain B, Crystal Structure Of Glutathione Transferase Homolog From
Drosophilia Mojavensis, Target Efi-501819, With Bound
Glutathione
Length = 228
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 89 VLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKE-----IKWSEYKKVPILMVDGEQ 143
+LY +A P VK L +PY VN +NK++ +K + VP+L
Sbjct: 5 ILYGIDASPPVRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLKKNPQHTVPLLEDGDAN 64
Query: 144 LVDSSAIIDQLDQKLTPKRKADSPSGDDEEKKWRGWVDNHL 184
+ DS AI+ L K K DS D K R VDN +
Sbjct: 65 IADSHAIMAYLVSKYG---KDDSLYPKDLVK--RALVDNRM 100
>pdb|1Z3E|A Chain A, Crystal Structure Of Spx In Complex With The C-Terminal
Domain Of The Rna Polymerase Alpha Subunit
Length = 132
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMVDG 141
V LY +C C K +A+L+ ++IP+ VE N I + + E K++ + DG
Sbjct: 3 VTLYTSPSCTSCRKARAWLEEHEIPF--VERN-IFSEPLSIDEIKQILRMTEDG 53
>pdb|3GFK|A Chain A, Crystal Structure Of Bacillus Subtilis SpxRNA POLYMERASE
Alpha Subunit C-Terminal Domain Complex
Length = 131
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMVDG 141
V LY +C C K +A+L+ ++IP+ VE N I + + E K++ + DG
Sbjct: 2 VTLYTSPSCTSCRKARAWLEEHEIPF--VERN-IFSEPLSIDEIKQILRMTEDG 52
>pdb|1FW1|A Chain A, Glutathione Transferase ZetaMALEYLACETOACETATE ISOMERASE
Length = 216
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 89 VLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSE-------YKKVPILMVDG 141
+LY Y +V+ L I YK V +N I ++S+ K+VP L +DG
Sbjct: 7 ILYSYFRSSCSWRVRIALALKGIDYKTVPINLIKDGGQQFSKDFQALNPMKQVPTLKIDG 66
Query: 142 EQLVDSSAIIDQLDQ-KLTPKRKADSP 167
+ S AII+ L++ + TP+ P
Sbjct: 67 ITIHQSLAIIEYLEETRPTPRLLPQDP 93
>pdb|2HT9|A Chain A, The Structure Of Dimeric Human Glutaredoxin 2
pdb|2HT9|B Chain B, The Structure Of Dimeric Human Glutaredoxin 2
Length = 146
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEV------NPINKKEIKWSEYKKVPILMVDG 141
VV++ +C +C K ++ YKVVE+ N K + + VP + V+G
Sbjct: 51 VVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNG 110
>pdb|3BBY|A Chain A, Crystal Structure Of Glutathione S-Transferase
(Np_416804.1) From Escherichia Coli K12 At 1.85 A
Resolution
Length = 215
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 114 KVVEVNPINKKEIKWSEY---KKVPILMVDGEQLVDSSAIIDQLDQKLTP 160
K ++++ + W Y ++VP+L +D +L +SSAI + L+ + P
Sbjct: 37 KTIDLDSGEHLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAP 86
>pdb|4GZ9|A Chain A, Mouse Neuropilin-1, Extracellular Domains 1-4 (A1a2b1b2)
pdb|4GZA|H Chain H, Complex Of Mouse Plexin A2 - Semaphorin 3a - Neuropilin-1
Length = 577
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 231 VSKKLKKKYNITDERAALYEAAETWVDALNGRE---FLGGSKPNLADLAVFGVLRPIRYL 287
+SK+ KKKY + R + E W+ G + F G + P L VF R++
Sbjct: 327 ISKETKKKYYVKTYRVDISSNGEDWISLKEGNKAIIFQGNTNPTDVVLGVFSKPLITRFV 386
Query: 288 R 288
R
Sbjct: 387 R 387
>pdb|1CD9|B Chain B, 2:2 Complex Of G-Csf With Its Receptor
pdb|1CD9|D Chain D, 2:2 Complex Of G-Csf With Its Receptor
pdb|1PGR|B Chain B, 2:2 Complex Of G-Csf With Its Receptor
pdb|1PGR|D Chain D, 2:2 Complex Of G-Csf With Its Receptor
pdb|1PGR|F Chain F, 2:2 Complex Of G-Csf With Its Receptor
pdb|1PGR|H Chain H, 2:2 Complex Of G-Csf With Its Receptor
Length = 215
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Query: 213 SFTEKLTAKYAGAAAMYFVSKKLKKKYNITDERAALYEAAETWVDALNGREFLGGSK-PN 271
SF + +Y G V+KK + +I + LY+ WV A N LG S+ P
Sbjct: 42 SFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMAIWVQAEN---MLGSSESPK 98
Query: 272 LA--DLAVFGVLRP-IRYLRSGRDMVEHTRIGEWYT 304
L + V + P ++ L G D+V H W +
Sbjct: 99 LCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLS 134
>pdb|2CZ2|A Chain A, Crystal Structure Of Glutathione Transferase Zeta 1-1
(Maleylacetoacetate Isomerase) From Mus Musculus (Form-1
Crystal)
pdb|2CZ3|A Chain A, Crystal Structure Of Glutathione Transferase Zeta 1-1
(Maleylacetoacetate Isomerase) From Mus Musculus (Form-2
Crystal)
pdb|2CZ3|B Chain B, Crystal Structure Of Glutathione Transferase Zeta 1-1
(Maleylacetoacetate Isomerase) From Mus Musculus (Form-2
Crystal)
Length = 223
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 89 VLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSE-------YKKVPILMVDG 141
+LY Y +V+ L I Y++V +N I +++E K+VP L +DG
Sbjct: 14 ILYSYFRSSCSWRVRIALALKGIDYEIVPINLIKDGGQQFTEEFQTLNPXKQVPALKIDG 73
Query: 142 EQLVDSSAIIDQLDQ 156
+V S AI + L++
Sbjct: 74 ITIVQSLAIXEYLEE 88
>pdb|1FHE|A Chain A, Glutathione Transferase (Fh47) From Fasciola Hepatica
Length = 217
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 248 LYEAAETWVDALNGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVEHTRIGEWYTRME 307
L + + W D L R +L GS + D ++ L IRYL + + E ++ E+ +R+E
Sbjct: 125 LPKTLKMWSDFLGDRHYLTGSSVSHVDFMLYETLDSIRYL-APHCLDEFPKLKEFKSRIE 183
>pdb|2CQ9|A Chain A, Solution Structure Of Rsgi Ruh-044, An N-Terminal Domain
Of Glutaredoxin 2 From Human Cdna
Length = 130
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEV------NPINKKEIKWSEYKKVPILMVDG 141
VV++ +C +C K ++ YKVVE+ N K + + VP + V+G
Sbjct: 29 VVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNG 88
>pdb|3OB8|A Chain A, Structure Of The Beta-Galactosidase From Kluyveromyces
Lactis In Complex With Galactose
pdb|3OB8|B Chain B, Structure Of The Beta-Galactosidase From Kluyveromyces
Lactis In Complex With Galactose
pdb|3OB8|D Chain D, Structure Of The Beta-Galactosidase From Kluyveromyces
Lactis In Complex With Galactose
pdb|3OB8|C Chain C, Structure Of The Beta-Galactosidase From Kluyveromyces
Lactis In Complex With Galactose
pdb|3OBA|A Chain A, Structure Of The Beta-Galactosidase From Kluyveromyces
Lactis
pdb|3OBA|C Chain C, Structure Of The Beta-Galactosidase From Kluyveromyces
Lactis
pdb|3OBA|D Chain D, Structure Of The Beta-Galactosidase From Kluyveromyces
Lactis
pdb|3OBA|B Chain B, Structure Of The Beta-Galactosidase From Kluyveromyces
Lactis
Length = 1032
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 203 FDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNITDERAALYEAAETWVDALNGR 262
+DY +GN + T L K+ GA + K+ + I+DE + EAA GR
Sbjct: 933 YDYPQENGNHTDTHFLNIKFEGAGKLSIFQKEKPFNFKISDEY-GVDEAAHACDVKRYGR 991
Query: 263 EFLGGSKPNLADLAVFGV 280
+L D A+ GV
Sbjct: 992 HYL------RLDHAIHGV 1003
>pdb|2FLS|A Chain A, Crystal Structure Of Human Glutaredoxin 2 Complexed With
Glutathione
Length = 132
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEV------NPINKKEIKWSEYKKVPILMVDG 141
VV++ +C +C K ++ YKVVE+ N K + + VP + V+G
Sbjct: 37 VVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNG 96
>pdb|1JLV|A Chain A, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|B Chain B, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|C Chain C, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|D Chain D, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|E Chain E, Anopheles Dirus Species B Glutathione S-transferases 1-3
pdb|1JLV|F Chain F, Anopheles Dirus Species B Glutathione S-transferases 1-3
Length = 209
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 259 LNGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVEHTRIGEWYTRMER 308
L+G +++ G +ADL V + Y +G ++ ++ + WY R +
Sbjct: 141 LDGHKYVAGDSLTIADLTVLATVS--TYDVAGFELAKYPHVAAWYERTRK 188
>pdb|1R7H|A Chain A, Nrdh-Redoxin Of Corynebacterium Ammoniagenes Forms A
Domain- Swapped Dimer
pdb|1R7H|B Chain B, Nrdh-Redoxin Of Corynebacterium Ammoniagenes Forms A
Domain- Swapped Dimer
Length = 75
Score = 28.1 bits (61), Expect = 7.3, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKE--IKWSEYKKVPILMVDGEQ 143
+ LY AC C K LD + Y V+++ ++ + Y + P++ VDGE
Sbjct: 3 ITLYTKPACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMALGYVQAPVVEVDGEH 60
>pdb|3IC4|A Chain A, The Crystal Structure Of The Glutaredoxin(Grx-1) From
Archaeoglobus Fulgidus
Length = 92
Score = 27.7 bits (60), Expect = 9.0, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 87 EVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIK 127
EV+ Y CP C + FL + ++V+ ++ + +E K
Sbjct: 13 EVLXYGLSTCPHCKRTLEFLKREGVDFEVIWIDKLEGEERK 53
>pdb|4FIW|A Chain A, X-ray Crystal Structure Of Corynebacterium Glutamicum
Nrdh-redoxin At 1.5a
Length = 77
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEV--NPINKKEIKWSEYKKVPILMVDGEQ 143
+ +Y AC CN K LD + Y +V++ + ++ + Y + P+++ DG
Sbjct: 3 ITVYTKPACVQCNATKKALDRAGLEYDLVDISLDEEAREYVLALGYLQAPVVVADGSH 60
>pdb|2VO4|A Chain A, Glutathione Transferase From Glycine Max
pdb|2VO4|B Chain B, Glutathione Transferase From Glycine Max
pdb|3FHS|A Chain A, Glutathione Transferase From Glycine Max At 2.7 Resolution
pdb|3FHS|B Chain B, Glutathione Transferase From Glycine Max At 2.7 Resolution
Length = 219
Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 87 EVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSE---YKKVPILMVDGEQ 143
EVVL + PF +V+ L I Y+ E + NK + +KK+P+L+ +G+
Sbjct: 4 EVVLLDFWPSPFGMRVRIALAEKGIKYEYKEEDLRNKSPLLLQMNPVHKKIPVLIHNGKP 63
Query: 144 LVDSSAIIDQLDQKLTPKRKADSPSGDDEEKKWRGWVD--NHLVHLLSPNIYRNTSEALE 201
+ + S I Q +++ R PS + + R W D + ++ L I+ + E E
Sbjct: 64 ICE-SLIAVQYIEEVWNDRNPLLPSDPYQRAQTRFWADYVDKKIYDLGRKIWTSKGEEKE 122
Query: 202 S 202
+
Sbjct: 123 A 123
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,495,979
Number of Sequences: 62578
Number of extensions: 336866
Number of successful extensions: 878
Number of sequences better than 100.0: 64
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 850
Number of HSP's gapped (non-prelim): 68
length of query: 319
length of database: 14,973,337
effective HSP length: 99
effective length of query: 220
effective length of database: 8,778,115
effective search space: 1931185300
effective search space used: 1931185300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)