BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020965
(319 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VDH1|FBX21_MOUSE F-box only protein 21 OS=Mus musculus GN=Fbxo21 PE=2 SV=1
Length = 627
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 503 YSIGLVMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS--- 559
Query: 268 ILVAYVAEENLLASDQP 284
Y A+ENL + +P
Sbjct: 560 --CRYAAQENLEYNVEP 574
>sp|Q5R5S1|FBX21_PONAB F-box only protein 21 OS=Pongo abelii GN=FBXO21 PE=2 SV=1
Length = 621
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 496 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS--- 552
Query: 268 ILVAYVAEENLLASDQP 284
Y A+ENL + +P
Sbjct: 553 --CRYAAQENLEYNVEP 567
>sp|O94952|FBX21_HUMAN F-box only protein 21 OS=Homo sapiens GN=FBXO21 PE=2 SV=2
Length = 628
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
+ +G + HK +GY VI G DP C W+ V L G QPFY VLV+ +
Sbjct: 503 YSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHHQPFYNVLVEDGS--- 559
Query: 268 ILVAYVAEENLLASDQP 284
Y A+ENL + +P
Sbjct: 560 --CRYAAQENLEYNVEP 574
>sp|Q6D6C5|HSPQ_ERWCT Heat shock protein HspQ OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=hspQ PE=3 SV=1
Length = 102
Score = 43.1 bits (100), Expect = 0.003, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F LGQ++ HK+ G+ VI +DP E+ +W EI+ + + S+P+Y V++ D
Sbjct: 6 FGLGQQIRHKLLGFPGVIIDIDPEYSLETPTWEEISGNDTPR---SEPWYHVVMEDNEGQ 62
Query: 266 P---NILVAYVAEENLLASDQPDMLEIS 290
P + A++ +E L D P + E++
Sbjct: 63 PMHTYLAEAHLMKEELSEHDHPSLNELA 90
>sp|Q8D251|HSPQ_WIGBR Heat shock protein HspQ OS=Wigglesworthia glossinidia brevipalpis
GN=hspQ PE=3 SV=2
Length = 105
Score = 41.6 bits (96), Expect = 0.008, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V HK+ GY VI +DP E S EI+ + L++ P +Y V+ D P
Sbjct: 6 FGIGQQVRHKLLGYLGVIIDVDPEYSLEKPSLEEISADDSLRRSPW--YYVVMEDEDGKP 63
Query: 267 NILVAYVAEENL------LASDQPDMLEISS 291
+ Y+AE L + +QP + E+S+
Sbjct: 64 --VHTYLAEAQLGYEISPVHPEQPKLDELSA 92
>sp|C6DKX0|HSPQ_PECCP Heat shock protein HspQ OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=hspQ PE=3 SV=1
Length = 102
Score = 39.3 bits (90), Expect = 0.037, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F +GQ++ HK+ G+ V+ +DP E+ +W EI+ + + S+P+Y V++ D
Sbjct: 6 FGIGQQIRHKLLGFPGVVIDIDPEYSLETPTWEEISGNDTPR---SEPWYHVVMEDDEGQ 62
Query: 266 PNILVAYVAEENLLASD 282
P + Y+AE L+ +
Sbjct: 63 P--IHTYLAEAQLMKEE 77
>sp|Q492P5|HSPQ_BLOPB Heat shock protein HspQ OS=Blochmannia pennsylvanicus (strain BPEN)
GN=hspQ PE=3 SV=1
Length = 105
Score = 39.3 bits (90), Expect = 0.038, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V HK+ GY VI +DP E + EI + + L++ P ++ V+ D P
Sbjct: 6 FGIGQQVRHKLLGYLGVIIDIDPEYSLEKPTLDEITKNDTLRKSPW--YHVVMEDEEGKP 63
Query: 267 NILVAYVAE-----ENLLASDQPDMLEISSQSSSCERSTTGL 303
+ Y+AE EN+L + L+ S+S + T L
Sbjct: 64 --MHTYLAEVQLGYENILTHPEQTTLDELSESIRLQLQTPRL 103
>sp|Q1LT59|HSPQ_BAUCH Heat shock protein HspQ OS=Baumannia cicadellinicola subsp.
Homalodisca coagulata GN=hspQ PE=3 SV=1
Length = 105
Score = 37.0 bits (84), Expect = 0.20, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWME-IAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V HK+FGY VI +DP +++ IA + L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHKLFGYLGVIIDVDPEYSLDKPYIDKIAADDSLR---TAPWYHVVME-DEDG 61
Query: 267 NILVAYVAEENL 278
+ Y+AE L
Sbjct: 62 KPVHTYLAEAQL 73
>sp|P47319|UVRB_MYCGE UvrABC system protein B OS=Mycoplasma genitalium (strain ATCC 33530
/ G-37 / NCTC 10195) GN=uvrB PE=3 SV=1
Length = 656
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 145 LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAE 190
L +KS A+ A I +L +++KA ++NY LA ++RD I +LE E
Sbjct: 604 LKAKSNAEKNAALIKQLTKEMKKAAANQNYELAIEIRDSIFELEKE 649
>sp|Q2NU66|HSPQ_SODGM Heat shock protein HspQ OS=Sodalis glossinidius (strain morsitans)
GN=hspQ PE=3 SV=1
Length = 105
Score = 36.6 bits (83), Expect = 0.25, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V HK+ GY VI +DP E S +IA + L+ + P+Y V+++
Sbjct: 6 FGIGQQVRHKLLGYLGVIIDVDPEYSLEKPSLDDIAADDSLR---TAPWYHVVMEDEEGK 62
Query: 267 NILVAYVAEENL------LASDQPDMLEIS 290
+ + Y+AE L + +QP + E++
Sbjct: 63 PVHI-YLAEAQLGYESFPVHPEQPTLDELA 91
>sp|Q32HU0|HSPQ_SHIDS Heat shock protein HspQ OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=hspQ PE=3 SV=2
Length = 105
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDERPEQPSMDELA 91
>sp|Q3Z3F4|HSPQ_SHISS Heat shock protein HspQ OS=Shigella sonnei (strain Ss046) GN=hspQ
PE=3 SV=2
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|P0AB23|HSPQ_SHIFL Heat shock protein HspQ OS=Shigella flexneri GN=hspQ PE=3 SV=2
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|Q0T668|HSPQ_SHIF8 Heat shock protein HspQ OS=Shigella flexneri serotype 5b (strain
8401) GN=hspQ PE=3 SV=2
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|Q31YM9|HSPQ_SHIBS Heat shock protein HspQ OS=Shigella boydii serotype 4 (strain
Sb227) GN=hspQ PE=3 SV=2
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B2TTS8|HSPQ_SHIB3 Heat shock protein HspQ OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|Q1RDP6|HSPQ_ECOUT Heat shock protein HspQ OS=Escherichia coli (strain UTI89 / UPEC)
GN=hspQ PE=3 SV=2
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B1LJ31|HSPQ_ECOSM Heat shock protein HspQ OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B6I941|HSPQ_ECOSE Heat shock protein HspQ OS=Escherichia coli (strain SE11) GN=hspQ
PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B7N3C9|HSPQ_ECOLU Heat shock protein HspQ OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|P0AB20|HSPQ_ECOLI Heat shock protein HspQ OS=Escherichia coli (strain K12) GN=hspQ
PE=1 SV=2
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B1IVW6|HSPQ_ECOLC Heat shock protein HspQ OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|P0AB21|HSPQ_ECOL6 Heat shock protein HspQ OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=hspQ PE=3 SV=2
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|Q0TJ94|HSPQ_ECOL5 Heat shock protein HspQ OS=Escherichia coli O6:K15:H31 (strain 536
/ UPEC) GN=hspQ PE=3 SV=2
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|A1A9N5|HSPQ_ECOK1 Heat shock protein HspQ OS=Escherichia coli O1:K1 / APEC GN=hspQ
PE=3 SV=2
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B1X8S0|HSPQ_ECODH Heat shock protein HspQ OS=Escherichia coli (strain K12 / DH10B)
GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|C4ZQ92|HSPQ_ECOBW Heat shock protein HspQ OS=Escherichia coli (strain K12 / MC4100 /
BW2952) GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B7M895|HSPQ_ECO8A Heat shock protein HspQ OS=Escherichia coli O8 (strain IAI1)
GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B7MS77|HSPQ_ECO81 Heat shock protein HspQ OS=Escherichia coli O81 (strain ED1a)
GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B7NLF0|HSPQ_ECO7I Heat shock protein HspQ OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B5YT97|HSPQ_ECO5E Heat shock protein HspQ OS=Escherichia coli O157:H7 (strain EC4115
/ EHEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|P0AB22|HSPQ_ECO57 Heat shock protein HspQ OS=Escherichia coli O157:H7 GN=hspQ PE=3
SV=2
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B7LE66|HSPQ_ECO55 Heat shock protein HspQ OS=Escherichia coli (strain 55989 / EAEC)
GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B7MIC0|HSPQ_ECO45 Heat shock protein HspQ OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|B7UN45|HSPQ_ECO27 Heat shock protein HspQ OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=hspQ PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCES-SSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DPV S S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVNDELR---AAPWYHVVME---DD 59
Query: 267 NILV--AYVAEENLLA------SDQPDMLEIS 290
N L Y+AE L + +QP M E++
Sbjct: 60 NGLPVHTYLAEAQLSSELQDEHPEQPSMDELA 91
>sp|Q57QS4|HSPQ_SALCH Heat shock protein HspQ OS=Salmonella choleraesuis (strain SC-B67)
GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP + S E+A ++L+ + P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPEYSLDEPSPDELAVNDELR---AAPWYHVVME-DDDG 61
Query: 267 NILVAYVAEENLLA------SDQPDMLEIS 290
+ Y+AE L + +QP M E++
Sbjct: 62 QPVRTYLAEAQLRSEMRDEHPEQPSMDELA 91
>sp|Q7VR10|HSPQ_BLOFL Heat shock protein HspQ OS=Blochmannia floridanus GN=hspQ PE=3 SV=1
Length = 105
Score = 35.8 bits (81), Expect = 0.39, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F++GQ+V HK+ GY V+ +DP E + E+ + + L++ P ++ V+ D P
Sbjct: 6 FKIGQQVRHKLLGYLGVVIDIDPEYSLEKPTLDEVTKNDSLRKFPW--YHVVMEDDEGKP 63
Query: 267 NILVAYVAEENLLASD 282
+ Y+AE L D
Sbjct: 64 --IHTYLAEIQLGYED 77
>sp|P75558|UVRB_MYCPN UvrABC system protein B OS=Mycoplasma pneumoniae (strain ATCC 29342
/ M129) GN=uvrB PE=3 SV=1
Length = 657
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 145 LSSKSEAQDKALSIIRLRADLQKAIDSENYALAADLRDQICKLEAE 190
L +KS Q KA I +L ++++A ++NY LA ++RD I +LE +
Sbjct: 605 LKTKSSEQQKAALIKQLTKEMKQAAANQNYELAIEIRDSIFELEKQ 650
>sp|A8AIB1|HSPQ_CITK8 Heat shock protein HspQ OS=Citrobacter koseri (strain ATCC BAA-895
/ CDC 4225-83 / SGSC4696) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP + S E+A ++L+ P ++ V+ D P
Sbjct: 6 FGIGQQVRHSLLGYLGVVVDIDPEYSLDEPSPDELAVNDELRAAPW--YHVVMEDDEGQP 63
Query: 267 NILVAYVAEENLLA------SDQPDMLEIS 290
+ Y+AE L + +QP M E++
Sbjct: 64 --VHTYLAEAQLSSETQDEHPEQPSMDELA 91
>sp|A1JMW1|HSPQ_YERE8 Heat shock protein HspQ OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=hspQ PE=3 SV=1
Length = 105
Score = 35.0 bits (79), Expect = 0.80, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLV-DVHAD 265
F +GQ+V H++ GY V+ +DP E + E+A + L+ P+Y V++ D
Sbjct: 6 FGIGQQVRHRLHGYLGVVIDIDPEYSLEPPAPDEVANNDTLRL---SPWYHVVIEDDEGQ 62
Query: 266 PNILVAYVAEENLLASD------QPDMLEISS 291
P + Y+AE L D QP + E+++
Sbjct: 63 P--VHTYLAEAQLTYEDMDAHPEQPSLDELAA 92
>sp|B2VDG6|HSPQ_ERWT9 Heat shock protein HspQ OS=Erwinia tasmaniensis (strain DSM 17950 /
Et1/99) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.7 bits (78), Expect = 0.92, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDPVCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADPN 267
F LGQ+V H+++G+ VI +DP + + ++ A + +G P+Y V+++ D
Sbjct: 6 FGLGQQVRHQLYGFLGVIVDVDPEYSLADTEIDDAATSETLRG--APWYHVVME-DDDGQ 62
Query: 268 ILVAYVAEENL 278
+ Y+AE L
Sbjct: 63 TVQTYLAEAQL 73
>sp|B1JQP7|HSPQ_YERPY Heat shock protein HspQ OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP E+A + L+ S P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLHGYLGVVIDIDPEYSLAPPEPDEVANNKTLR---SSPWYHVVIE-DDDG 61
Query: 267 NILVAYVAEENLLASD------QPDMLEISS 291
+ Y+AE L D QP + E+++
Sbjct: 62 QPVHTYLAEAQLTYEDVDAHPEQPSLDELAA 92
>sp|Q66CE1|HSPQ_YERPS Heat shock protein HspQ OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=hspQ PE=3 SV=2
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP E+A + L+ S P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLHGYLGVVIDIDPEYSLAPPEPDEVANNKTLR---SSPWYHVVIE-DDDG 61
Query: 267 NILVAYVAEENLLASD------QPDMLEISS 291
+ Y+AE L D QP + E+++
Sbjct: 62 QPVHTYLAEAQLTYEDVDAHPEQPSLDELAA 92
>sp|A4TKV5|HSPQ_YERPP Heat shock protein HspQ OS=Yersinia pestis (strain Pestoides F)
GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP E+A + L+ S P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLHGYLGVVIDIDPEYSLAPPEPDEVANNKTLR---SSPWYHVVIE-DDDG 61
Query: 267 NILVAYVAEENLLASD------QPDMLEISS 291
+ Y+AE L D QP + E+++
Sbjct: 62 QPVHTYLAEAQLTYEDVDAHPEQPSLDELAA 92
>sp|Q1CGL7|HSPQ_YERPN Heat shock protein HspQ OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP E+A + L+ S P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLHGYLGVVIDIDPEYSLAPPEPDEVANNKTLR---SSPWYHVVIE-DDDG 61
Query: 267 NILVAYVAEENLLASD------QPDMLEISS 291
+ Y+AE L D QP + E+++
Sbjct: 62 QPVHTYLAEAQLTYEDVDAHPEQPSLDELAA 92
>sp|A9R2N8|HSPQ_YERPG Heat shock protein HspQ OS=Yersinia pestis bv. Antiqua (strain
Angola) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP E+A + L+ S P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLHGYLGVVIDIDPEYSLAPPEPDEVANNKTLR---SSPWYHVVIE-DDDG 61
Query: 267 NILVAYVAEENLLASD------QPDMLEISS 291
+ Y+AE L D QP + E+++
Sbjct: 62 QPVHTYLAEAQLTYEDVDAHPEQPSLDELAA 92
>sp|Q7CHM0|HSPQ_YERPE Heat shock protein HspQ OS=Yersinia pestis GN=hspQ PE=3 SV=2
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP E+A + L+ S P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLHGYLGVVIDIDPEYSLAPPEPDEVANNKTLR---SSPWYHVVIE-DDDG 61
Query: 267 NILVAYVAEENLLASD------QPDMLEISS 291
+ Y+AE L D QP + E+++
Sbjct: 62 QPVHTYLAEAQLTYEDVDAHPEQPSLDELAA 92
>sp|B2JYU3|HSPQ_YERPB Heat shock protein HspQ OS=Yersinia pseudotuberculosis serotype IB
(strain PB1/+) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP E+A + L+ S P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLHGYLGVVIDIDPEYSLAPPEPDEVANNKTLR---SSPWYHVVIE-DDDG 61
Query: 267 NILVAYVAEENLLASD------QPDMLEISS 291
+ Y+AE L D QP + E+++
Sbjct: 62 QPVHTYLAEAQLTYEDVDAHPEQPSLDELAA 92
>sp|Q1CA18|HSPQ_YERPA Heat shock protein HspQ OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP E+A + L+ S P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLHGYLGVVIDIDPEYSLAPPEPDEVANNKTLR---SSPWYHVVIE-DDDG 61
Query: 267 NILVAYVAEENLLASD------QPDMLEISS 291
+ Y+AE L D QP + E+++
Sbjct: 62 QPVHTYLAEAQLTYEDVDAHPEQPSLDELAA 92
>sp|A7FJR9|HSPQ_YERP3 Heat shock protein HspQ OS=Yersinia pseudotuberculosis serotype
O:1b (strain IP 31758) GN=hspQ PE=3 SV=1
Length = 105
Score = 34.3 bits (77), Expect = 1.3, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 208 FRLGQKVNHKIFGYRAVICGMDP-VCCESSSWMEIAQVEKLQQGPSQPFYQVLVDVHADP 266
F +GQ+V H + GY V+ +DP E+A + L+ S P+Y V+++ D
Sbjct: 6 FGIGQQVRHSLHGYLGVVIDIDPEYSLAPPEPDEVANNKTLR---SSPWYHVVIE-DDDG 61
Query: 267 NILVAYVAEENLLASD------QPDMLEISS 291
+ Y+AE L D QP + E+++
Sbjct: 62 QPVHTYLAEAQLTYEDVDAHPEQPSLDELAA 92
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.132 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,589,551
Number of Sequences: 539616
Number of extensions: 3865754
Number of successful extensions: 12380
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 12341
Number of HSP's gapped (non-prelim): 182
length of query: 319
length of database: 191,569,459
effective HSP length: 117
effective length of query: 202
effective length of database: 128,434,387
effective search space: 25943746174
effective search space used: 25943746174
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)