Query 020966
Match_columns 319
No_of_seqs 189 out of 1491
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 06:33:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020966.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020966hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 5E-105 1E-109 756.6 25.4 292 23-319 20-324 (324)
2 cd00693 secretory_peroxidase H 100.0 2.7E-98 6E-103 708.9 24.4 290 27-318 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 7.6E-72 1.6E-76 511.9 9.8 227 44-283 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 1.1E-69 2.3E-74 508.7 20.3 231 42-316 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.5E-66 3.3E-71 482.1 18.6 230 39-304 11-251 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 2.9E-65 6.2E-70 472.1 20.1 231 31-304 4-248 (250)
7 cd00692 ligninase Ligninase an 100.0 2.1E-64 4.6E-69 480.6 19.8 236 40-319 16-287 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 1.1E-63 2.4E-68 460.9 19.8 222 40-304 16-248 (251)
9 cd00314 plant_peroxidase_like 100.0 2.5E-59 5.4E-64 434.9 16.4 224 43-300 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 1.3E-57 2.9E-62 440.6 17.6 257 42-309 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 4.1E-55 8.8E-60 447.3 18.8 254 42-306 55-405 (716)
12 PRK15061 catalase/hydroperoxid 100.0 3.2E-51 6.9E-56 416.6 18.8 258 41-309 56-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 1.1E-50 2.3E-55 374.4 13.3 213 50-300 33-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 3.6E-41 7.8E-46 314.6 17.2 221 46-302 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 8.6E-36 1.9E-40 305.4 16.9 221 43-303 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 3.5E-35 7.6E-40 299.5 17.8 221 46-302 442-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 1.4E-33 3E-38 276.3 15.1 250 42-301 70-415 (730)
18 COG0376 KatG Catalase (peroxid 99.6 3.7E-14 8.1E-19 140.3 14.0 217 46-302 452-725 (730)
19 PTZ00411 transaldolase-like pr 72.2 12 0.00026 36.6 6.8 48 138-185 180-230 (333)
20 PRK12309 transaldolase/EF-hand 60.1 37 0.00081 33.9 7.8 47 138-185 174-224 (391)
21 TIGR00874 talAB transaldolase. 57.7 34 0.00074 33.2 6.9 137 137-288 167-310 (317)
22 PF07172 GRP: Glycine rich pro 56.2 9.1 0.0002 30.6 2.2 19 1-20 1-19 (95)
23 PRK05269 transaldolase B; Prov 52.5 39 0.00084 32.8 6.3 52 138-189 170-224 (318)
24 PF11895 DUF3415: Domain of un 50.7 13 0.00029 28.8 2.3 18 286-303 2-19 (80)
25 PRK01844 hypothetical protein; 45.9 26 0.00057 26.6 3.1 29 43-71 24-52 (72)
26 COG3763 Uncharacterized protei 44.1 53 0.0011 24.9 4.5 30 42-71 23-52 (71)
27 PRK00523 hypothetical protein; 37.7 45 0.00098 25.4 3.3 29 43-71 25-53 (72)
28 KOG0400 40S ribosomal protein 31.0 35 0.00077 29.0 2.0 33 169-201 31-64 (151)
29 PRK01362 putative translaldola 26.1 54 0.0012 30.0 2.5 43 138-190 121-163 (214)
30 PRK13859 type IV secretion sys 21.6 65 0.0014 23.0 1.6 31 126-156 9-42 (55)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=5.3e-105 Score=756.58 Aligned_cols=292 Identities=46% Similarity=0.783 Sum_probs=277.4
Q ss_pred ccCCCCCcchhccCChhHHHHHHHHHHHHHhhCCCchhhHHHHhhhccCCCCCCccccccCCCCCccccCCCCCCCCchh
Q 020966 23 TSNAQLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARG 102 (319)
Q Consensus 23 ~~~~~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~~~~g 102 (319)
++.++|+++||++|||++|+||++.|++.+.++|+++|++|||+||||||+||||||||+++ .+||++++|. +++|
T Consensus 20 ~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~G 95 (324)
T PLN03030 20 VQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRG 95 (324)
T ss_pred chhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-Ccch
Confidence 34567999999999999999999999999999999999999999999999999999999864 3699999998 8899
Q ss_pred HHHHHHHHHHHHhhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcC
Q 020966 103 FEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKG 182 (319)
Q Consensus 103 ~~~i~~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~G 182 (319)
|++|+.||+++|++||++|||||||++||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++|
T Consensus 96 f~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~G 174 (324)
T PLN03030 96 YDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKG 174 (324)
T ss_pred HHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999887775 89999999999999999999
Q ss_pred CCccCceeeccCcccccccccccccccCC--------CCCCCHHHHHHhhhcCCCCCCCCCCCCCC-CCCCccCcHHHHH
Q 020966 183 LTAQDMTVLSGGHAIGFARCAAFRNRIYN--------DTNIDPAFATTRRTTCPATGGDPNLAPLD-QTPNRFDNSYYQN 253 (319)
Q Consensus 183 l~~~dlVaLsGaHTiG~~hc~~f~~Rl~~--------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D-~tp~~FDn~Yy~~ 253 (319)
|+.+|||+||||||||++||.+|.+|+|| ||+|||.|++.|++.||..+++.+.+++| .||.+|||+||++
T Consensus 175 l~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~n 254 (324)
T PLN03030 175 LNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSN 254 (324)
T ss_pred CCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHH
Confidence 99999999999999999999999999995 89999999999999999643333467899 9999999999999
Q ss_pred HhhcccccccccccccCcchHHHHHHhhcCc----hhHHHHHHHHHHHhhcCCCCCCCCCcccccCccCC
Q 020966 254 LVNRRGLLHSDQELFNGGSQDATVRGYSTNP----ASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN 319 (319)
Q Consensus 254 l~~~~glL~SD~~L~~d~~t~~~V~~yA~~~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 319 (319)
|+.++|+|+|||+|+.|++|+++|++||.|+ +.|+++|++||+|||+|+|+||++|||||+|+++|
T Consensus 255 ll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 255 LKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 9999999999999999999999999999885 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.7e-98 Score=708.92 Aligned_cols=290 Identities=59% Similarity=0.969 Sum_probs=279.3
Q ss_pred CCCcchhccCChhHHHHHHHHHHHHHhhCCCchhhHHHHhhhccCCCCCCccccccCCCCCccccCCCCCCCCchhHHHH
Q 020966 27 QLSPTFYATSCPNFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVI 106 (319)
Q Consensus 27 ~L~~~fY~~sCp~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~i 106 (319)
||+++||++|||++|+||++.|++.+..+++++|++|||+||||||+||||||||+++.+..+|+++++|. +++||++|
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~-~l~g~~~i 79 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNL-SLRGFDVI 79 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCC-CcchhHHH
Confidence 69999999999999999999999999999999999999999999999999999999887778999999999 78999999
Q ss_pred HHHHHHHHhhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCcc
Q 020966 107 DAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQ 186 (319)
Q Consensus 107 ~~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~ 186 (319)
+.||+++|+.||++|||||||+||||+||+++|||.|+|++||+|+.++.+..+ ++||+|+.+++++++.|+++||+++
T Consensus 80 ~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~ 158 (298)
T cd00693 80 DDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVT 158 (298)
T ss_pred HHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999999999999999999999999998877765 6899999999999999999999999
Q ss_pred CceeeccCcccccccccccccccCC-------CCCCCHHHHHHhhhcCCCCCCCCCCCCCC-CCCCccCcHHHHHHhhcc
Q 020966 187 DMTVLSGGHAIGFARCAAFRNRIYN-------DTNIDPAFATTRRTTCPATGGDPNLAPLD-QTPNRFDNSYYQNLVNRR 258 (319)
Q Consensus 187 dlVaLsGaHTiG~~hc~~f~~Rl~~-------dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D-~tp~~FDn~Yy~~l~~~~ 258 (319)
|||+|+||||||++||.+|.+|+|+ ||+||+.|+..|++.||..+++.+.+++| .||.+|||+||++++.++
T Consensus 159 d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~~ 238 (298)
T cd00693 159 DLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR 238 (298)
T ss_pred HheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhcc
Confidence 9999999999999999999999984 89999999999999999754455678999 999999999999999999
Q ss_pred cccccccccccCcchHHHHHHhhcCchhHHHHHHHHHHHhhcCCCCCCCCCcccccCccC
Q 020966 259 GLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVV 318 (319)
Q Consensus 259 glL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 318 (319)
|+|+||++|+.|++|+++|++||.||+.|+++|++||+||++++|+||.+||||++|+++
T Consensus 239 glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 239 GLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=7.6e-72 Score=511.91 Aligned_cols=227 Identities=53% Similarity=0.926 Sum_probs=207.7
Q ss_pred HHHHHHHHHhhCCCchhhHHHHhhhccCC-CCCCccccccCCCCCccccCCCCCCCCchhHHHHHHHHHHHHhhCCCCCC
Q 020966 44 ARDEMTKAVNRQPRNAASILRLFFHDCFV-NGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLEAACNATVS 122 (319)
Q Consensus 44 V~~~v~~~~~~~~~~a~~llRl~FHDc~v-~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~i~~iK~~le~~cp~~VS 122 (319)
||+.|++.+..+++++|+||||+|||||+ +|||||||+. .+|+++++|.++.+++++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 79999999999999999999999999999 9999999983 47999999995444999999999999999999999
Q ss_pred HHHHHHHhhhhhhhccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccCceeeccCcccccccc
Q 020966 123 CADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARC 202 (319)
Q Consensus 123 cADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHTiG~~hc 202 (319)
|||||+|||++||+.+|||.|+|++||+|+.++.+.++ .+||.|+.+++++++.|+++|||++|||||+||||||++||
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c 154 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHC 154 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESG
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceeccccccccee
Confidence 99999999999999999999999999999999999877 78999999999999999999999999999999999999999
Q ss_pred cccccccCC--CCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCcHHHHHHhhcccccccccccccCcchHHHHHHh
Q 020966 203 AAFRNRIYN--DTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNRRGLLHSDQELFNGGSQDATVRGY 280 (319)
Q Consensus 203 ~~f~~Rl~~--dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~y 280 (319)
.+|. |+|. ||.||+.|+.. .| ..+++. .+++| ||.+|||+||+++++++|+|+||++|+.|++|+++|++|
T Consensus 155 ~~f~-rl~~~~dp~~d~~~~~~---~C-~~~~~~-~~~~d-tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~V~~y 227 (230)
T PF00141_consen 155 SSFS-RLYFPPDPTMDPGYAGQ---NC-NSGGDN-GVPLD-TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPIVERY 227 (230)
T ss_dssp GCTG-GTSCSSGTTSTHHHHHH---SS-STSGCT-CEESS-STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHHHHHH
T ss_pred cccc-cccccccccccccccee---cc-CCCccc-ccccc-CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHHHHHH
Confidence 9999 9995 89999999988 99 443333 67889 999999999999999999999999999999999999999
Q ss_pred hcC
Q 020966 281 STN 283 (319)
Q Consensus 281 A~~ 283 (319)
|+|
T Consensus 228 A~d 230 (230)
T PF00141_consen 228 AQD 230 (230)
T ss_dssp HHT
T ss_pred hcC
Confidence 976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.1e-69 Score=508.68 Aligned_cols=231 Identities=26% Similarity=0.468 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHhhCCCchhhHHHHhhhccC-------CCCCCccccccCCCCCccccCCCCCCCCchhHHHHHHHHHHHH
Q 020966 42 RIARDEMTKAVNRQPRNAASILRLFFHDCF-------VNGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLE 114 (319)
Q Consensus 42 ~iV~~~v~~~~~~~~~~a~~llRl~FHDc~-------v~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~i~~iK~~le 114 (319)
+.++++|+ .+.++|.++|.+|||+||||| ++||||||+++ +|+++++|.++.+|+++|++||+++
T Consensus 15 ~~~~~~~~-~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~- 86 (289)
T PLN02608 15 EKARRDLR-ALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH- 86 (289)
T ss_pred HHHHHHHH-HHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc-
Confidence 45677774 467799999999999999999 89999999984 5999999994447999999999987
Q ss_pred hhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccCceeeccC
Q 020966 115 AACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGG 194 (319)
Q Consensus 115 ~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGa 194 (319)
++|||||||+||||+||+++|||.|+|++||+|++++.+ +.+||+|+.+++++++.|+++|||++|||+|+||
T Consensus 87 ----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGA 159 (289)
T PLN02608 87 ----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGG 159 (289)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhccc
Confidence 389999999999999999999999999999999999864 3579999999999999999999999999999999
Q ss_pred ccccccccccccccc-CCCCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCcHHHHHHhhc--ccc--ccccccccc
Q 020966 195 HAIGFARCAAFRNRI-YNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNR--RGL--LHSDQELFN 269 (319)
Q Consensus 195 HTiG~~hc~~f~~Rl-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn~Yy~~l~~~--~gl--L~SD~~L~~ 269 (319)
||||++||. |+ |+ .+|+.||.+|||+||++++.+ +|+ |+||++|+.
T Consensus 160 HTiG~ahc~----r~g~~-------------------------g~~~~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L~~ 210 (289)
T PLN02608 160 HTLGRAHPE----RSGFD-------------------------GPWTKEPLKFDNSYFVELLKGESEGLLKLPTDKALLE 210 (289)
T ss_pred ccccccccc----CCCCC-------------------------CCCCCCCCccChHHHHHHHcCCcCCccccccCHhhhc
Confidence 999999994 32 10 135579999999999999998 788 799999999
Q ss_pred CcchHHHHHHhhcCchhHHHHHHHHHHHhhcCCCCCCCCCcccccCc
Q 020966 270 GGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCR 316 (319)
Q Consensus 270 d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 316 (319)
|++|+++|+.||.||+.|+++|++||+||++|+|+||++||+.+.-+
T Consensus 211 d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 211 DPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred ChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 99999999999999999999999999999999999999999987643
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.5e-66 Score=482.11 Aligned_cols=230 Identities=25% Similarity=0.422 Sum_probs=207.2
Q ss_pred hHHHHHHHHHHHHHhhCCCchhhHHHHhhhccCCCCCCccccccC---CCCCccccCCCCCCCCchhHHHHHHHHHHHHh
Q 020966 39 NFQRIARDEMTKAVNRQPRNAASILRLFFHDCFVNGCDGSVLLDD---TATFTGEKNAGPNRNSARGFEVIDAIKTRLEA 115 (319)
Q Consensus 39 ~~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~GcDgSill~~---~~~~~~E~~~~~N~~~~~g~~~i~~iK~~le~ 115 (319)
..++||++.|++.+. +++++|++|||+|||||+ ||+|+++++ +..+.+|+++++|.++.+||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 567899999999999 999999999999999994 777776643 223457999999995559999999999976
Q ss_pred hCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccCceeeccCc
Q 020966 116 ACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSGGH 195 (319)
Q Consensus 116 ~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaH 195 (319)
| +|||||||+||||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++|||++|||+|+|||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaH 162 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAH 162 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcccc
Confidence 4 8999999999999999999999999999999999998777777899999999999999999999999999999999
Q ss_pred ccccccccccccccCCCCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCcHHHHHHhhccc--------cccccccc
Q 020966 196 AIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNRRG--------LLHSDQEL 267 (319)
Q Consensus 196 TiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn~Yy~~l~~~~g--------lL~SD~~L 267 (319)
|||++||..+ . | . .+++.||.+|||+||++|+.++| +|+||++|
T Consensus 163 TiG~a~c~~~--~-~-------------------~------g~~~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L~sD~~L 214 (253)
T cd00691 163 TLGRCHKERS--G-Y-------------------D------GPWTKNPLKFDNSYFKELLEEDWKLPTPGLLMLPTDKAL 214 (253)
T ss_pred eeecccccCC--C-C-------------------C------CCCCCCCCcccHHHHHHHhcCCCccCcCcceechhhHHH
Confidence 9999999531 0 0 0 12347999999999999999999 99999999
Q ss_pred ccCcchHHHHHHhhcCchhHHHHHHHHHHHhhcCCCC
Q 020966 268 FNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPL 304 (319)
Q Consensus 268 ~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~ 304 (319)
+.|++|+++|+.||.|+++|+++|++||+||++++|.
T Consensus 215 ~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 215 LEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred HcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999985
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=2.9e-65 Score=472.07 Aligned_cols=231 Identities=26% Similarity=0.446 Sum_probs=206.7
Q ss_pred chhccC--ChhHHHHHHHHHHHHHhhCCCchhhHHHHhhh-----ccCCC--CCCccccccCCCCCccccCCCCCCCCch
Q 020966 31 TFYATS--CPNFQRIARDEMTKAVNRQPRNAASILRLFFH-----DCFVN--GCDGSVLLDDTATFTGEKNAGPNRNSAR 101 (319)
Q Consensus 31 ~fY~~s--Cp~~e~iV~~~v~~~~~~~~~~a~~llRl~FH-----Dc~v~--GcDgSill~~~~~~~~E~~~~~N~~~~~ 101 (319)
+||... |+++++.+++.+++.+ .+++++|.||||+|| ||+++ ||||||.+ .+|+++++|.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~~ 76 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIHI 76 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHHH
Confidence 566644 8899999999999987 789999999999999 88775 99999954 36999999986558
Q ss_pred hHHHHHHHHHHHHhhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHH-
Q 020966 102 GFEVIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAA- 180 (319)
Q Consensus 102 g~~~i~~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~- 180 (319)
||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+ +++||.|+.++++|++.|++
T Consensus 77 ~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~ 148 (250)
T PLN02364 77 ALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAKQ 148 (250)
T ss_pred HHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHHh
Confidence 999999999987 489999999999999999999999999999999999875 35799999999999999997
Q ss_pred cCCCccCceeeccCcccccccccccccccCCCCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCcHHHHHHhhc--c
Q 020966 181 KGLTAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNR--R 258 (319)
Q Consensus 181 ~Gl~~~dlVaLsGaHTiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn~Yy~~l~~~--~ 258 (319)
+|||++|||+|+||||||++|| .|+. .. .+|+.||.+|||+||++|+.+ +
T Consensus 149 ~Gl~~~d~VaLsGaHTiG~~hc----~r~~---------------------~~---g~~~~tp~~fDn~Yy~~ll~~~~~ 200 (250)
T PLN02364 149 MGLSDKDIVALSGAHTLGRCHK----DRSG---------------------FE---GAWTSNPLIFDNSYFKELLSGEKE 200 (250)
T ss_pred cCCCHHHheeeecceeeccccC----CCCC---------------------CC---CCCCCCCCccchHHHHHHhcCCcC
Confidence 6999999999999999999999 2320 00 135579999999999999998 8
Q ss_pred cccc--cccccccCcchHHHHHHhhcCchhHHHHHHHHHHHhhcCCCC
Q 020966 259 GLLH--SDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPL 304 (319)
Q Consensus 259 glL~--SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~ 304 (319)
|+|. ||++|+.|++|+.+|+.||.|++.|+++|++||+||++|++-
T Consensus 201 gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 201 GLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred CCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9865 999999999999999999999999999999999999999873
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.1e-64 Score=480.63 Aligned_cols=236 Identities=25% Similarity=0.370 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHHHhhCC---CchhhHHHHhhhccCC------------CCCCccccccCCCCCccccCCCCCCCCchhHH
Q 020966 40 FQRIARDEMTKAVNRQP---RNAASILRLFFHDCFV------------NGCDGSVLLDDTATFTGEKNAGPNRNSARGFE 104 (319)
Q Consensus 40 ~e~iV~~~v~~~~~~~~---~~a~~llRl~FHDc~v------------~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~ 104 (319)
+|..|+++|++.+..+. ..|+.+|||+||||++ ||||||||++++ .|+++++|. +++ +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~-gL~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANI-GLD--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCC-CHH--H
Confidence 58899999999998554 4677899999999996 899999999753 599999998 455 8
Q ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHhhhhhhh-ccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCC
Q 020966 105 VIDAIKTRLEAACNATVSCADILAVAARDGVA-LLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGL 183 (319)
Q Consensus 105 ~i~~iK~~le~~cp~~VScADiialAar~Av~-~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 183 (319)
+|+.+|..+|+.| |||||||+||||+||+ .+|||.|+|++||+|++++.+. ++||.|+.++++|++.|+++||
T Consensus 89 vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~---g~LP~p~~sv~~l~~~F~~~Gf 162 (328)
T cd00692 89 IVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPD---GLVPEPFDSVDKILARFADAGF 162 (328)
T ss_pred HHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcc---cCCCCCCCCHHHHHHHHHHcCC
Confidence 9999999999998 9999999999999999 5699999999999999998754 4799999999999999999999
Q ss_pred CccCceeeccCcccccccccccccccCCCCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCcHHHHHHh-hccc---
Q 020966 184 TAQDMTVLSGGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLV-NRRG--- 259 (319)
Q Consensus 184 ~~~dlVaLsGaHTiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn~Yy~~l~-~~~g--- 259 (319)
+++|||+|+||||||++|. .||+++. .+||.||.+|||+||++++ .+++
T Consensus 163 ~~~E~VaLsGAHTiG~a~~--------~Dps~~g-------------------~p~D~TP~~FDn~Yf~~ll~~~~~~~g 215 (328)
T cd00692 163 SPDELVALLAAHSVAAQDF--------VDPSIAG-------------------TPFDSTPGVFDTQFFIETLLKGTAFPG 215 (328)
T ss_pred CHHHHhhhcccccccccCC--------CCCCCCC-------------------CCCCCCcchhcHHHHHHHHHcCCCCCC
Confidence 9999999999999999992 1565541 4689999999999999987 4555
Q ss_pred ----------------ccccccccccCcchHHHHHHhhcCchhHHHHHHHHHHHhhcCCCCCCCCCcccccCccCC
Q 020966 260 ----------------LLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPLTGTNGEIRRNCRVVN 319 (319)
Q Consensus 260 ----------------lL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 319 (319)
+|+||++|+.|++|+.+|++||+||++|+++|++||+||++|||. ...+.+|+.|+
T Consensus 216 ~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs~v~ 287 (328)
T cd00692 216 SGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCSDVI 287 (328)
T ss_pred ccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCcccC
Confidence 499999999999999999999999999999999999999999886 34777999875
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=1.1e-63 Score=460.86 Aligned_cols=222 Identities=24% Similarity=0.402 Sum_probs=198.7
Q ss_pred HHHHHHHHHHHHHhhCCCchhhHHHHhhhccCC-------CCCCccccccCCCCCccccCCCCCCCCchhHHHHHHHHHH
Q 020966 40 FQRIARDEMTKAVNRQPRNAASILRLFFHDCFV-------NGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTR 112 (319)
Q Consensus 40 ~e~iV~~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~i~~iK~~ 112 (319)
..+-+++.+.+.+ .+...+|.+|||+||||.+ |||||||++. +|+++++|.++..++++|++||++
T Consensus 16 ~~~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~~~~~~i~~iK~~ 88 (251)
T PLN02879 16 AVQRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLDIAVRLLDPIKEL 88 (251)
T ss_pred HHHHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChHHHHHHHHHHHHH
Confidence 3345677788876 4678999999999999974 8999999863 599999999655599999999998
Q ss_pred HHhhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccCceeec
Q 020966 113 LEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLS 192 (319)
Q Consensus 113 le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs 192 (319)
+ ++|||||||+||||+||+.+|||.|+|++||+|+.++.+ +++||.|+.++++|++.|+++||+++|||||+
T Consensus 89 ~-----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALs 160 (251)
T PLN02879 89 F-----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDKDIVALS 160 (251)
T ss_pred c-----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHHHHeeee
Confidence 7 489999999999999999999999999999999998865 45799999999999999999999999999999
Q ss_pred cCcccccccccccccccCCCCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCcHHHHHHhhc--ccc--cccccccc
Q 020966 193 GGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNR--RGL--LHSDQELF 268 (319)
Q Consensus 193 GaHTiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn~Yy~~l~~~--~gl--L~SD~~L~ 268 (319)
||||||++||. |. +.+ .+||.||.+|||+||++|+.+ +|+ |+||++|+
T Consensus 161 GaHTiG~ah~~----r~---------------------g~~---g~~d~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL~ 212 (251)
T PLN02879 161 GGHTLGRCHKE----RS---------------------GFE---GAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALL 212 (251)
T ss_pred ccccccccccc----cc---------------------cCC---CCCCCCccceeHHHHHHHHcCCcCCCccchhhHHHh
Confidence 99999999994 21 111 137789999999999999998 888 67999999
Q ss_pred cCcchHHHHHHhhcCchhHHHHHHHHHHHhhcCCCC
Q 020966 269 NGGSQDATVRGYSTNPASFARDFAAAMVKMGNISPL 304 (319)
Q Consensus 269 ~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~ 304 (319)
.|++|+++|++||.||++|+++|++||+||++||+.
T Consensus 213 ~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 213 DDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred cCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999999999999975
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=2.5e-59 Score=434.90 Aligned_cols=224 Identities=30% Similarity=0.463 Sum_probs=205.1
Q ss_pred HHHHHHHHHHhhCCCchhhHHHHhhhccCCC--------CCCccccccCCCCCccccCCCCCCCCchhHHHHHHHHHHHH
Q 020966 43 IARDEMTKAVNRQPRNAASILRLFFHDCFVN--------GCDGSVLLDDTATFTGEKNAGPNRNSARGFEVIDAIKTRLE 114 (319)
Q Consensus 43 iV~~~v~~~~~~~~~~a~~llRl~FHDc~v~--------GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~i~~iK~~le 114 (319)
.|++.|++.+.+++.+++++|||+||||++. ||||||++++ |+++++|.++.+++++|++||.++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~------e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP------ELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc------cccCcccccHHHHHHHHHHHHHHcC
Confidence 4889999999999999999999999999985 9999999973 9999999976799999999999999
Q ss_pred hhCCCCCCHHHHHHHhhhhhhhcc--CCCceeecCCCCCCCCcc--ccccccCCCCCCCCHHHHHHHHHHcCCCccCcee
Q 020966 115 AACNATVSCADILAVAARDGVALL--GGPTWTVPLGRRDARTAS--QSAANSQIPGPSSSLATLISMFAAKGLTAQDMTV 190 (319)
Q Consensus 115 ~~cp~~VScADiialAar~Av~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVa 190 (319)
. |++|||||||++|+++||+.+ |||.|+|++||+|+..+. ...+..++|.|..+++++++.|+++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 899999999999999999999 999999999999999764 2233456788888999999999999999999999
Q ss_pred ec-cCccc-ccccccccccccCCCCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCcHHHHHHhhcc----------
Q 020966 191 LS-GGHAI-GFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNRR---------- 258 (319)
Q Consensus 191 Ls-GaHTi-G~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn~Yy~~l~~~~---------- 258 (319)
|+ ||||| |++||..|..|+ |+ .++.||.+|||+||++++.++
T Consensus 154 L~~GaHti~G~~~~~~~~~~~-----------------~~---------~~~~tp~~fDN~yy~~l~~~~~~~~~~~~~~ 207 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEG-----------------SG---------LWTSTPFTFDNAYFKNLLDMNWEWRVGSPDP 207 (255)
T ss_pred hccCCeeccCcccCCCCCccc-----------------CC---------CCCCCCCccchHHHHHHhcCCcccccCCccC
Confidence 99 99999 999998877653 21 344899999999999999988
Q ss_pred ------cccccccccccCcchHHHHHHhhcCchhHHHHHHHHHHHhhc
Q 020966 259 ------GLLHSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGN 300 (319)
Q Consensus 259 ------glL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~ 300 (319)
++|+||+.|+.|++|+.+|+.||.|++.|+++|++||+||++
T Consensus 208 ~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 208 DGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred CCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999974
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.3e-57 Score=440.61 Aligned_cols=257 Identities=20% Similarity=0.315 Sum_probs=227.7
Q ss_pred HHHHHHHHHHHhhC--------CCchhhHHHHhhhccCC-------CCCC-ccccccCCCCCccccCCCCCCCCchhHHH
Q 020966 42 RIARDEMTKAVNRQ--------PRNAASILRLFFHDCFV-------NGCD-GSVLLDDTATFTGEKNAGPNRNSARGFEV 105 (319)
Q Consensus 42 ~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~~~~E~~~~~N~~~~~g~~~ 105 (319)
+.|+++|++.+... ...+|.+|||+|||+.+ ||++ |+|.++ +|++++.|.++.+++.+
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------pe~~~~~N~gL~~a~~~ 118 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------PLNSWPDNVNLDKARRL 118 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------cccCcHhhhhHHHHHHH
Confidence 68999999999865 47999999999999985 8997 788764 69999999988889999
Q ss_pred HHHHHHHHHhhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccc----------------------------
Q 020966 106 IDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQ---------------------------- 157 (319)
Q Consensus 106 i~~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~---------------------------- 157 (319)
++.||+++. ..||+||+|+||+..|||.+|||.|++..||.|...+..
T Consensus 119 L~pik~k~~----~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a 194 (409)
T cd00649 119 LWPIKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAA 194 (409)
T ss_pred HHHHHHHcC----CCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhh
Confidence 999999874 479999999999999999999999999999999975432
Q ss_pred ----------cccccCCCCCCCCHHHHHHHHHHcCCCccCceee-ccCcccccccccccccccCCCCCCCHHHHHHhh--
Q 020966 158 ----------SAANSQIPGPSSSLATLISMFAAKGLTAQDMTVL-SGGHAIGFARCAAFRNRIYNDTNIDPAFATTRR-- 224 (319)
Q Consensus 158 ----------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHTiG~~hc~~f~~Rl~~dp~~d~~~~~~L~-- 224 (319)
++ ...||+|..++.+|++.|.+||||++||||| +||||||++||..|.+|+++||.+++.|++.|+
T Consensus 195 ~~mgliyv~Peg-p~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg~dP~~~~~~~~gLgw~ 273 (409)
T cd00649 195 VQMGLIYVNPEG-PDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVGPEPEAAPIEQQGLGWK 273 (409)
T ss_pred hhccccccCCCC-CCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCCCCCCcCHHHHHhhccc
Confidence 11 2269999999999999999999999999999 599999999999999999999999999999996
Q ss_pred hcCCCCCC-CCCCCCCC----CCCCccCcHHHHHHhh------------------------------------ccccccc
Q 020966 225 TTCPATGG-DPNLAPLD----QTPNRFDNSYYQNLVN------------------------------------RRGLLHS 263 (319)
Q Consensus 225 ~~Cp~~~~-~~~~~~~D----~tp~~FDn~Yy~~l~~------------------------------------~~glL~S 263 (319)
.+||...+ +..+..+| .||++|||+||++|+. ++|||+|
T Consensus 274 ~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~gmL~S 353 (409)
T cd00649 274 NSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPMMLTT 353 (409)
T ss_pred ccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCcccchh
Confidence 89996432 22233455 7999999999999998 4589999
Q ss_pred ccccccCcchHHHHHHhhcCchhHHHHHHHHHHHh--hcCCCCCCCCC
Q 020966 264 DQELFNGGSQDATVRGYSTNPASFARDFAAAMVKM--GNISPLTGTNG 309 (319)
Q Consensus 264 D~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km--~~lgv~tg~~G 309 (319)
|++|+.|++|+++|++||+|+++||++|++||+|| +.+|+++--.|
T Consensus 354 D~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 354 DLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred hHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 99999999999999999999999999999999999 69999986555
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=4.1e-55 Score=447.26 Aligned_cols=254 Identities=20% Similarity=0.264 Sum_probs=222.8
Q ss_pred HHHHHHHHHHHhhC--------CCchhhHHHHhhhccCC-------CCCC-ccccccCCCCCccccCCCCCCCCchhHHH
Q 020966 42 RIARDEMTKAVNRQ--------PRNAASILRLFFHDCFV-------NGCD-GSVLLDDTATFTGEKNAGPNRNSARGFEV 105 (319)
Q Consensus 42 ~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~~~~E~~~~~N~~~~~g~~~ 105 (319)
+.|+++|++.+... ...+|.+|||+||++.+ |||+ |+|.++ +|++++.|.++.+++.+
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P~~sw~~N~~Ldka~~l 128 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------PLNSWPDNVNLDKARRL 128 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------cccCchhhhhHHHHHHH
Confidence 57999999999875 37999999999999985 7884 777664 69999999988889999
Q ss_pred HHHHHHHHHhhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCcc-----------------------------
Q 020966 106 IDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTAS----------------------------- 156 (319)
Q Consensus 106 i~~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~----------------------------- 156 (319)
++.||+ +||++|||||||+||+++|||.+|||.|+|.+||+|+..+.
T Consensus 129 L~pIk~----kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~ 204 (716)
T TIGR00198 129 LWPIKK----KYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAAT 204 (716)
T ss_pred HHHHHH----HCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhh
Confidence 999987 48899999999999999999999999999999999994332
Q ss_pred --------ccccccCCCCCCCCHHHHHHHHHHcCCCccCceeec-cCcccccccccccccccCCCCCCCHHHHHHhhhcC
Q 020966 157 --------QSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLS-GGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTC 227 (319)
Q Consensus 157 --------~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~C 227 (319)
+.+ ...+|+|..++++|++.|.+||||++|||||+ ||||||++||.+|.+|+..||+++|.|++.|+++|
T Consensus 205 ~~Gliyvnpeg-~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rlg~dP~~~~~~~~gLg~~c 283 (716)
T TIGR00198 205 EMGLIYVNPEG-PDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELIGPDPEGAPIEEQGLGWHN 283 (716)
T ss_pred hccccccCccc-ccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccCCCCCCcCHHHHHHhcccC
Confidence 122 22699999999999999999999999999996 99999999999999999889999999999999999
Q ss_pred CCCC---CCCCCCCC----CCCCCccCcHHHHHHhhc----------------------------------ccccccccc
Q 020966 228 PATG---GDPNLAPL----DQTPNRFDNSYYQNLVNR----------------------------------RGLLHSDQE 266 (319)
Q Consensus 228 p~~~---~~~~~~~~----D~tp~~FDn~Yy~~l~~~----------------------------------~glL~SD~~ 266 (319)
|... .++.+..+ ..||++|||+||++|+.. .++|+||++
T Consensus 284 ~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~SDla 363 (716)
T TIGR00198 284 QYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLDADLA 363 (716)
T ss_pred CCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccchhHH
Confidence 8532 22222334 479999999999999974 689999999
Q ss_pred cccCcchHHHHHHhhcCchhHHHHHHHHHHHhh--cCCCCCC
Q 020966 267 LFNGGSQDATVRGYSTNPASFARDFAAAMVKMG--NISPLTG 306 (319)
Q Consensus 267 L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~--~lgv~tg 306 (319)
|..|++|+++|+.||.|++.|+++|++||+||+ .+|++.-
T Consensus 364 L~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~ 405 (716)
T TIGR00198 364 LRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSR 405 (716)
T ss_pred hccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhh
Confidence 999999999999999999999999999999998 5666543
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=3.2e-51 Score=416.59 Aligned_cols=258 Identities=19% Similarity=0.297 Sum_probs=223.9
Q ss_pred HHHHHHHHHHHHhhC--------CCchhhHHHHhhhccCC-------CCCC-ccccccCCCCCccccCCCCCCCCchhHH
Q 020966 41 QRIARDEMTKAVNRQ--------PRNAASILRLFFHDCFV-------NGCD-GSVLLDDTATFTGEKNAGPNRNSARGFE 104 (319)
Q Consensus 41 e~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcD-gSill~~~~~~~~E~~~~~N~~~~~g~~ 104 (319)
.+.|+++|++.+... ...+|.+|||+||++.+ |||+ |+|.+. +|++++.|.++.+++.
T Consensus 56 ~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------pe~~w~~N~gL~ka~~ 129 (726)
T PRK15061 56 LEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------PLNSWPDNVNLDKARR 129 (726)
T ss_pred HHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------ccccchhhhhHHHHHH
Confidence 367999999999865 47999999999999985 8996 777664 6999999998889999
Q ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccc---------------------------
Q 020966 105 VIDAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQ--------------------------- 157 (319)
Q Consensus 105 ~i~~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~--------------------------- 157 (319)
++++||+++. ..||+||+|+||+..|||.+|||.|++..||.|...+..
T Consensus 130 ~L~pik~ky~----~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl 205 (726)
T PRK15061 130 LLWPIKQKYG----NKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPL 205 (726)
T ss_pred HHHHHHHHhC----CCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccch
Confidence 9999999874 479999999999999999999999999999999865432
Q ss_pred ------------cccccCCCCCCCCHHHHHHHHHHcCCCccCceeec-cCcccccccccccccccCCCCCCCHHHHHHhh
Q 020966 158 ------------SAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLS-GGHAIGFARCAAFRNRIYNDTNIDPAFATTRR 224 (319)
Q Consensus 158 ------------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~hc~~f~~Rl~~dp~~d~~~~~~L~ 224 (319)
++ +..+|+|..++.+|++.|.+||||++|||||+ ||||||++||..|.+|+..||.+++.+++.|+
T Consensus 206 ~a~~mgliyvnpeg-p~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rlgpdP~~a~~~~qgLg 284 (726)
T PRK15061 206 AAVQMGLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHVGPEPEAAPIEEQGLG 284 (726)
T ss_pred hhhhccceecCCCC-CCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCcccccCCCCCcCHHHHHhcc
Confidence 11 12389999999999999999999999999995 99999999999999999889999999999985
Q ss_pred --hcCCCCC-CCCCCC----CCCCCCCccCcHHHHHHhhc------------------------------------cccc
Q 020966 225 --TTCPATG-GDPNLA----PLDQTPNRFDNSYYQNLVNR------------------------------------RGLL 261 (319)
Q Consensus 225 --~~Cp~~~-~~~~~~----~~D~tp~~FDn~Yy~~l~~~------------------------------------~glL 261 (319)
..||... .++.+. +|..||++|||+||++|+.+ .+||
T Consensus 285 w~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~~ML 364 (726)
T PRK15061 285 WKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAPTML 364 (726)
T ss_pred ccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccCcccc
Confidence 8999632 222222 34479999999999999984 5899
Q ss_pred ccccccccCcchHHHHHHhhcCchhHHHHHHHHHHHh--hcCCCCCCCCC
Q 020966 262 HSDQELFNGGSQDATVRGYSTNPASFARDFAAAMVKM--GNISPLTGTNG 309 (319)
Q Consensus 262 ~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km--~~lgv~tg~~G 309 (319)
+||++|..||+++++|++||+|+++|+++|++||.|| ..+|+++---|
T Consensus 365 tSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 365 TTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred cccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 9999999999999999999999999999999999999 45777654333
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=1.1e-50 Score=374.36 Aligned_cols=213 Identities=25% Similarity=0.350 Sum_probs=177.7
Q ss_pred HHHhhCCCchhhHHHHhhhccC-------CCCCCccccccCCCCCccccC-CCCCCCCchhHHHHHHHHHHHHhhCCCCC
Q 020966 50 KAVNRQPRNAASILRLFFHDCF-------VNGCDGSVLLDDTATFTGEKN-AGPNRNSARGFEVIDAIKTRLEAACNATV 121 (319)
Q Consensus 50 ~~~~~~~~~a~~llRl~FHDc~-------v~GcDgSill~~~~~~~~E~~-~~~N~~~~~g~~~i~~iK~~le~~cp~~V 121 (319)
.....+++++++||||+||||| +|||||||+++.. .+|+. .+.|. ++++|+.|+.+ +|
T Consensus 33 ~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~-~l~~~~~i~~~----------~V 98 (264)
T cd08201 33 CAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNT-TLNFFVNFYSP----------RS 98 (264)
T ss_pred cCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhh-ccccceeeccC----------cc
Confidence 3445788999999999999999 8999999999743 36777 44444 67888877543 69
Q ss_pred CHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccCceeecc-Ccccccc
Q 020966 122 SCADILAVAARDGVALLGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLSG-GHAIGFA 200 (319)
Q Consensus 122 ScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG-aHTiG~~ 200 (319)
|||||||||+|+||+.+|||.|+|++||+|++++.+. .||.|+.++++|++.|+++||+++|||+|+| |||||++
T Consensus 99 ScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~a 174 (264)
T cd08201 99 SMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLGGV 174 (264)
T ss_pred CHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeeeec
Confidence 9999999999999999999999999999999988764 4999999999999999999999999999995 9999999
Q ss_pred cccccccccCCCCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCcHHHHHHhhccc----------ccccccccccC
Q 020966 201 RCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLVNRRG----------LLHSDQELFNG 270 (319)
Q Consensus 201 hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn~Yy~~l~~~~g----------lL~SD~~L~~d 270 (319)
||..|.+++. |.. ......+||.||.+|||+||.+++.+.. .+.||..++..
T Consensus 175 hc~~f~~~~~--~g~----------------~~~~~~p~dstp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd~r~f~~ 236 (264)
T cd08201 175 HSEDFPEIVP--PGS----------------VPDTVLQFFDTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSDLRIFSS 236 (264)
T ss_pred ccccchhhcC--Ccc----------------ccCCCCCCCCCccccchHHHHHHhcCCCCCceeecCCCCccchhhheec
Confidence 9999877651 100 0001247999999999999999998642 46899999986
Q ss_pred cchHHHHHHhhcCchhHHHHHHHHHHHhhc
Q 020966 271 GSQDATVRGYSTNPASFARDFAAAMVKMGN 300 (319)
Q Consensus 271 ~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~ 300 (319)
+. ...++..| +++.|.+.++..+.||++
T Consensus 237 d~-n~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 237 DG-NVTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred Cc-cHHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 53 45566677 789999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=3.6e-41 Score=314.60 Aligned_cols=221 Identities=20% Similarity=0.297 Sum_probs=183.1
Q ss_pred HHHHHHHhhCCCchhhHHHHhhhccCC-------CCCCcc-ccccCCCCCccccCCCCCCC--CchhHHHHHHHHHHHHh
Q 020966 46 DEMTKAVNRQPRNAASILRLFFHDCFV-------NGCDGS-VLLDDTATFTGEKNAGPNRN--SARGFEVIDAIKTRLEA 115 (319)
Q Consensus 46 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~--~~~g~~~i~~iK~~le~ 115 (319)
+.+++.+.......+.+|||+||++.+ ||++|+ |.| .+|++|+.|.+ +.+.+.++++||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 567777777788899999999999985 899999 666 46999999997 67889999999998853
Q ss_pred h-CC-CCCCHHHHHHHhhhhhhhccCC-----CceeecCCCCCCCCcccccc--ccCCCCCC------------CCHHHH
Q 020966 116 A-CN-ATVSCADILAVAARDGVALLGG-----PTWTVPLGRRDARTASQSAA--NSQIPGPS------------SSLATL 174 (319)
Q Consensus 116 ~-cp-~~VScADiialAar~Av~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 174 (319)
. -+ ..||+||+|+||+..|||.+|| |.|++.+||.|...+..... ...+|.+. .+.+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 2 12 2799999999999999999999 99999999999987643211 11345332 245789
Q ss_pred HHHHHHcCCCccCceeeccCc-ccccccccccccccCCCCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCcHHHHH
Q 020966 175 ISMFAAKGLTAQDMTVLSGGH-AIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQN 253 (319)
Q Consensus 175 ~~~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn~Yy~~ 253 (319)
++.|.++|||++|||||+||| ++|..|..+ ..++|..+|.+|||.||++
T Consensus 171 rd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s------------------------------~~G~wT~~p~~f~N~fF~n 220 (297)
T cd08200 171 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGS------------------------------KHGVFTDRPGVLTNDFFVN 220 (297)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCC------------------------------CCCCCcCCCCccccHHHHH
Confidence 999999999999999999998 699888421 1136778999999999999
Q ss_pred Hhhcc--------------------c-----ccccccccccCcchHHHHHHhhcC--chhHHHHHHHHHHHhhcCC
Q 020966 254 LVNRR--------------------G-----LLHSDQELFNGGSQDATVRGYSTN--PASFARDFAAAMVKMGNIS 302 (319)
Q Consensus 254 l~~~~--------------------g-----lL~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~Fa~Am~Km~~lg 302 (319)
|++.. | .+++|.+|.+|++.|++|+.||.| +++||++|++||.||+++.
T Consensus 221 LLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 221 LLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred HhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 99520 1 268899999999999999999998 9999999999999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=8.6e-36 Score=305.43 Aligned_cols=221 Identities=22% Similarity=0.297 Sum_probs=179.5
Q ss_pred HHHHHHHHH---HhhCCCchhhHHHHhhhccCC-------CCCCcc-ccccCCCCCccccCCCCC--CCCchhHHHHHHH
Q 020966 43 IARDEMTKA---VNRQPRNAASILRLFFHDCFV-------NGCDGS-VLLDDTATFTGEKNAGPN--RNSARGFEVIDAI 109 (319)
Q Consensus 43 iV~~~v~~~---~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N--~~~~~g~~~i~~i 109 (319)
+|+++|.+. +....-..+.|||++||++.+ ||++|+ |.|. +|++++.| .++.+.+.+++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHH
Confidence 446666553 445666789999999999985 899998 7664 69999999 7677889999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHhhhhhhhcc---CCC--ceeecCCCCCCCCccccccccCCC---CC------------CC
Q 020966 110 KTRLEAACNATVSCADILAVAARDGVALL---GGP--TWTVPLGRRDARTASQSAANSQIP---GP------------SS 169 (319)
Q Consensus 110 K~~le~~cp~~VScADiialAar~Av~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP---~p------------~~ 169 (319)
|+++.. ..||+||+|+||+..|||.+ ||| .+++.+||.|....... ++...| .+ ..
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td-~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTD-AESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCC-ccccccCCCCCcccchhccccccCC
Confidence 998752 27999999999999999998 998 58999999999876432 122222 11 23
Q ss_pred CHHHHHHHHHHcCCCccCceeeccCc-ccccccccccccccCCCCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCc
Q 020966 170 SLATLISMFAAKGLTAQDMTVLSGGH-AIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDN 248 (319)
Q Consensus 170 ~~~~l~~~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn 248 (319)
..+.|++.|.++|||++|||||+||| ++|++|..++ .++|..+|.+|||
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~------------------------------~G~~T~~p~~f~N 628 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSK------------------------------HGVFTDRVGVLSN 628 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCCCC------------------------------CCCCcCCCCcccc
Confidence 45678999999999999999999995 9999994221 1367789999999
Q ss_pred HHHHHHhhcc--------------------c---c--cccccccccCcchHHHHHHhhcCc--hhHHHHHHHHHHHhhcC
Q 020966 249 SYYQNLVNRR--------------------G---L--LHSDQELFNGGSQDATVRGYSTNP--ASFARDFAAAMVKMGNI 301 (319)
Q Consensus 249 ~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~~~--~~F~~~Fa~Am~Km~~l 301 (319)
.||++|++.. | + ..+|.+|.+|++.|++|+.||+|+ ++|+++|++||.|+.++
T Consensus 629 dfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~Klm~l 708 (716)
T TIGR00198 629 DFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWTKVMNL 708 (716)
T ss_pred HHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHHHHHhC
Confidence 9999999721 2 2 278999999999999999999997 89999999999999998
Q ss_pred CC
Q 020966 302 SP 303 (319)
Q Consensus 302 gv 303 (319)
+-
T Consensus 709 dr 710 (716)
T TIGR00198 709 DR 710 (716)
T ss_pred CC
Confidence 63
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=3.5e-35 Score=299.50 Aligned_cols=221 Identities=23% Similarity=0.323 Sum_probs=183.0
Q ss_pred HHHHHHHhhCCCchhhHHHHhhhccCC-------CCCCcc-ccccCCCCCccccCCCCCC--CCchhHHHHHHHHHHHHh
Q 020966 46 DEMTKAVNRQPRNAASILRLFFHDCFV-------NGCDGS-VLLDDTATFTGEKNAGPNR--NSARGFEVIDAIKTRLEA 115 (319)
Q Consensus 46 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~--~~~~g~~~i~~iK~~le~ 115 (319)
..+++.+....-..+.|||++||++.+ ||++|+ |.|+ +|++++.|. ++.+.+.+++.||++++.
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 566777777777899999999999985 899998 7774 699999998 677889999999999864
Q ss_pred hCC--CCCCHHHHHHHhhhhhhhcc---CC--CceeecCCCCCCCCcccccc--ccCCCCCC------------CCHHHH
Q 020966 116 ACN--ATVSCADILAVAARDGVALL---GG--PTWTVPLGRRDARTASQSAA--NSQIPGPS------------SSLATL 174 (319)
Q Consensus 116 ~cp--~~VScADiialAar~Av~~~---GG--P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 174 (319)
.-. ..||.||+|+||+..|||.+ || |.+++.+||.|......... ...+|.+. ...+.|
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L 595 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELL 595 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHH
Confidence 321 36999999999999999998 68 99999999999987543221 12456532 234789
Q ss_pred HHHHHHcCCCccCceeeccCc-ccccccccccccccCCCCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCcHHHHH
Q 020966 175 ISMFAAKGLTAQDMTVLSGGH-AIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQN 253 (319)
Q Consensus 175 ~~~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn~Yy~~ 253 (319)
++.|.++|||++|||||+||| ++|..|-.+ ..++|..+|.+|||.||++
T Consensus 596 ~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S------------------------------~~G~~T~~p~~fsNdfFvn 645 (726)
T PRK15061 596 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGS------------------------------KHGVFTDRPGVLTNDFFVN 645 (726)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCC------------------------------CCCCCcCCCCccccHHHHH
Confidence 999999999999999999997 789888322 1135778999999999999
Q ss_pred Hhhcc--------------------c---c--cccccccccCcchHHHHHHhhcC--chhHHHHHHHHHHHhhcCC
Q 020966 254 LVNRR--------------------G---L--LHSDQELFNGGSQDATVRGYSTN--PASFARDFAAAMVKMGNIS 302 (319)
Q Consensus 254 l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~Fa~Am~Km~~lg 302 (319)
|++.. | + +.+|..|.+|++.|++|+.||.| +++|+++|++||.|+++++
T Consensus 646 LLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeld 721 (726)
T PRK15061 646 LLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLD 721 (726)
T ss_pred HhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCC
Confidence 99521 1 1 47899999999999999999998 9999999999999999986
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-33 Score=276.30 Aligned_cols=250 Identities=19% Similarity=0.293 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHhhC--------CCchhhHHHHhhhccCC-------CCCCccccccCCCCCccccCCCCCCCCchhHHHH
Q 020966 42 RIARDEMTKAVNRQ--------PRNAASILRLFFHDCFV-------NGCDGSVLLDDTATFTGEKNAGPNRNSARGFEVI 106 (319)
Q Consensus 42 ~iV~~~v~~~~~~~--------~~~a~~llRl~FHDc~v-------~GcDgSill~~~~~~~~E~~~~~N~~~~~g~~~i 106 (319)
..|+++++..+... ....|.+|||+||-+++ ||..+. .-++.++.++|.|.++.+++.++
T Consensus 70 ~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G-----~qRFaPlnSWPDN~nLDKarRLL 144 (730)
T COG0376 70 AAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGG-----QQRFAPLNSWPDNANLDKARRLL 144 (730)
T ss_pred HHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCC-----ceecccccCCCcccchHHHHHHh
Confidence 35777777777665 35889999999999985 455432 23456899999999999999999
Q ss_pred HHHHHHHHhhCCCCCCHHHHHHHhhhhhhhccCCCceeecCCCCCCCCccc-----------------------------
Q 020966 107 DAIKTRLEAACNATVSCADILAVAARDGVALLGGPTWTVPLGRRDARTASQ----------------------------- 157 (319)
Q Consensus 107 ~~iK~~le~~cp~~VScADiialAar~Av~~~GGP~~~v~~GR~D~~~s~~----------------------------- 157 (319)
++||+++. ..||+||+|.|++..|+|.+|++.+.+..||.|-..+..
T Consensus 145 WPIKkKYG----~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaav 220 (730)
T COG0376 145 WPIKKKYG----RKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAV 220 (730)
T ss_pred hhHhHhhc----ccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhh
Confidence 99999875 589999999999999999999999999999999877764
Q ss_pred ---------cccccCCCCCCCCHHHHHHHHHHcCCCccCceeec-cCcccccccccccccccCCCCCCCHHHHHHhhhcC
Q 020966 158 ---------SAANSQIPGPSSSLATLISMFAAKGLTAQDMTVLS-GGHAIGFARCAAFRNRIYNDTNIDPAFATTRRTTC 227 (319)
Q Consensus 158 ---------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~C 227 (319)
++ ++..|+|..+..+++..|++|+++++|.|||+ ||||+|++|...-.+.+.++|.-.+--.+.|.+.-
T Consensus 221 qMGLIYVNPEG-png~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGlGW~~ 299 (730)
T COG0376 221 QMGLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGLGWAN 299 (730)
T ss_pred eeeeEEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhcCCCccccchhhhcccccc
Confidence 23 24589999999999999999999999999999 79999999987755566667876666666665543
Q ss_pred C--CC-CCCC----CCCCCCCCCCccCcHHHHHHhhcc-----------------------------------ccccccc
Q 020966 228 P--AT-GGDP----NLAPLDQTPNRFDNSYYQNLVNRR-----------------------------------GLLHSDQ 265 (319)
Q Consensus 228 p--~~-~~~~----~~~~~D~tp~~FDn~Yy~~l~~~~-----------------------------------glL~SD~ 265 (319)
. .+ +.++ -.++|..||++|||+||.+|+... .||++|.
T Consensus 300 ~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDl 379 (730)
T COG0376 300 TYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDL 379 (730)
T ss_pred ccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccch
Confidence 3 22 1121 135688899999999999999631 4899999
Q ss_pred ccccCcchHHHHHHhhcCchhHHHHHHHHHHHhhcC
Q 020966 266 ELFNGGSQDATVRGYSTNPASFARDFAAAMVKMGNI 301 (319)
Q Consensus 266 ~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~l 301 (319)
+|.-||..+++.++|.+|++.|.+.|++||.||.+-
T Consensus 380 aLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHR 415 (730)
T COG0376 380 ALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHR 415 (730)
T ss_pred hhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999764
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.56 E-value=3.7e-14 Score=140.30 Aligned_cols=217 Identities=21% Similarity=0.307 Sum_probs=160.2
Q ss_pred HHHHHHHhhCCCchhhHHHHhhhccCC-------CCCCcc-ccccCCCCCccccCCCCCCC--CchhHHHHHHHHHHHHh
Q 020966 46 DEMTKAVNRQPRNAASILRLFFHDCFV-------NGCDGS-VLLDDTATFTGEKNAGPNRN--SARGFEVIDAIKTRLEA 115 (319)
Q Consensus 46 ~~v~~~~~~~~~~a~~llRl~FHDc~v-------~GcDgS-ill~~~~~~~~E~~~~~N~~--~~~g~~~i~~iK~~le~ 115 (319)
..+++.+....-....|+-.+|-.+-+ ||.+|. |.|. +.++|+.|.. +.+-+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 356777777777889999999998864 788876 6664 5899999963 3356788888888776
Q ss_pred hCCCCCCHHHHHHHhhhhhhhcc---CCCc--eeecCCCCCCCCccccccccCC--CC------------CCCCHHHHHH
Q 020966 116 ACNATVSCADILAVAARDGVALL---GGPT--WTVPLGRRDARTASQSAANSQI--PG------------PSSSLATLIS 176 (319)
Q Consensus 116 ~cp~~VScADiialAar~Av~~~---GGP~--~~v~~GR~D~~~s~~~~~~~~l--P~------------p~~~~~~l~~ 176 (319)
..||.||+|+|++..+||.+ +|-. +|+.+||.|+............ |- ...+..-|++
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvD 601 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVD 601 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHH
Confidence 47999999999999999974 6654 5778999999765432211111 11 1123455788
Q ss_pred HHHHcCCCccCceeeccCc-ccccccccccccccCCCCCCCHHHHHHhhhcCCCCCCCCCCCCCCCCCCccCcHHHHHHh
Q 020966 177 MFAAKGLTAQDMTVLSGGH-AIGFARCAAFRNRIYNDTNIDPAFATTRRTTCPATGGDPNLAPLDQTPNRFDNSYYQNLV 255 (319)
Q Consensus 177 ~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~Rl~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~D~tp~~FDn~Yy~~l~ 255 (319)
.-+-.+||..||++|+||- -+|.-+..+ ....+...|..+.|.||.||+
T Consensus 602 kAqlL~LtapemtVLiGGlRvLg~n~g~s------------------------------~~GVfT~~pg~LtndFFvnLl 651 (730)
T COG0376 602 KAQLLTLTAPEMTVLIGGLRVLGANYGGS------------------------------KHGVFTDRPGVLTNDFFVNLL 651 (730)
T ss_pred HHHHhccCCccceEEEcceEeeccCCCCC------------------------------ccceeccCcccccchhhhhhh
Confidence 8888999999999999885 445443211 111234567788888888888
Q ss_pred hcc--------------------c-----ccccccccccCcchHHHHHHhhcC--chhHHHHHHHHHHHhhcCC
Q 020966 256 NRR--------------------G-----LLHSDQELFNGGSQDATVRGYSTN--PASFARDFAAAMVKMGNIS 302 (319)
Q Consensus 256 ~~~--------------------g-----lL~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~Fa~Am~Km~~lg 302 (319)
+-. | --..|..+-++++.|.+.+-||.+ ++.|.++|..||.|..++.
T Consensus 652 DM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 652 DMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred hccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 621 2 136888889999999999999975 7999999999999998874
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=72.21 E-value=12 Score=36.61 Aligned_cols=48 Identities=15% Similarity=0.139 Sum_probs=28.9
Q ss_pred cCCCceeecCCCCCCCCccccccccCCCCC---CCCHHHHHHHHHHcCCCc
Q 020966 138 LGGPTWTVPLGRRDARTASQSAANSQIPGP---SSSLATLISMFAAKGLTA 185 (319)
Q Consensus 138 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p---~~~~~~l~~~F~~~Gl~~ 185 (319)
+|-..+..+.||.+..--.+.......+.. -..+.++.+.|++.|+..
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T 230 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKT 230 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCe
Confidence 477889999999966432221111111211 234677888888888864
No 20
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=60.09 E-value=37 Score=33.91 Aligned_cols=47 Identities=15% Similarity=0.224 Sum_probs=30.1
Q ss_pred cCCCceeecCCCCCCCCccccccccCCCCCC----CCHHHHHHHHHHcCCCc
Q 020966 138 LGGPTWTVPLGRRDARTASQSAANSQIPGPS----SSLATLISMFAAKGLTA 185 (319)
Q Consensus 138 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~----~~~~~l~~~F~~~Gl~~ 185 (319)
+|-..+..+.||.|...-...+. ..+|.+. ..+.++.+.|++.|+..
T Consensus 174 AGa~~ISPfVgRi~dw~~~~~g~-~~~~~~~dpGv~~v~~i~~~~~~~~~~T 224 (391)
T PRK12309 174 AGVTLISPFVGRILDWYKKETGR-DSYPGAEDPGVQSVTQIYNYYKKFGYKT 224 (391)
T ss_pred cCCCEEEeecchhhhhhhhccCC-CccccccchHHHHHHHHHHHHHhcCCCc
Confidence 57788999999988743222111 1244333 24777888898888854
No 21
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=57.69 E-value=34 Score=33.21 Aligned_cols=137 Identities=12% Similarity=0.129 Sum_probs=64.2
Q ss_pred ccCCCceeecCCCCCCCCccccccccCCC----CCCCCHHHHHHHHHHcCCCccCceeeccCcccccccccccccccCCC
Q 020966 137 LLGGPTWTVPLGRRDARTASQSAANSQIP----GPSSSLATLISMFAAKGLTAQDMTVLSGGHAIGFARCAAFRNRIYND 212 (319)
Q Consensus 137 ~~GGP~~~v~~GR~D~~~s~~~~~~~~lP----~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHTiG~~hc~~f~~Rl~~d 212 (319)
.+|-..+..+.||.|...-...+.. ..+ ++-..+.++.+.|++.|+..+=|.|=. .+++....-.-.+++
T Consensus 167 ~AGa~~ISPFVgRi~dw~~~~~g~~-~~~~~~d~Gv~~v~~i~~~~k~~g~~T~Im~ASf--Rn~~qv~~laG~d~~--- 240 (317)
T TIGR00874 167 EAKVTLISPFVGRILDWYKAATGKK-EYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASF--RNKEEILALAGCDRL--- 240 (317)
T ss_pred HcCCCEEEeecchHhHhhhhccCcc-ccccccCchHHHHHHHHHHHHHcCCCcEEEeecc--CCHHHHHHHHCCCeE---
Confidence 3588889999999976322111100 111 123457778889999998654333211 011111100000111
Q ss_pred CCCCHHHHHHhhhcCCCCC---CCCCCCCCCCCCCccCcHHHHHHhhcccccccccccccCcchHHHHHHhhcCchhHH
Q 020966 213 TNIDPAFATTRRTTCPATG---GDPNLAPLDQTPNRFDNSYYQNLVNRRGLLHSDQELFNGGSQDATVRGYSTNPASFA 288 (319)
Q Consensus 213 p~~d~~~~~~L~~~Cp~~~---~~~~~~~~D~tp~~FDn~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~yA~~~~~F~ 288 (319)
++.|...+.|...-..-. ........+..|..+|...|+-.+...++ . -.++..-++.|+.|+....
T Consensus 241 -Ti~p~ll~~L~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~fr~~~~~d~m-------a-~ekl~~gir~F~~d~~~Le 310 (317)
T TIGR00874 241 -TISPALLDELKESTGPVERKLDPESAKKVDKQPIILDESEFRFLHNEDAM-------A-TEKLAEGIRKFAADQEKLE 310 (317)
T ss_pred -eCCHHHHHHHHhCCCCcCccCCccccccccccCCCCCHHHHHHHhCCCcc-------h-HHHHHHHHHHHHHHHHHHH
Confidence 567777777755321100 00000011123456788888644332211 1 1223555666666665443
No 22
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=56.22 E-value=9.1 Score=30.59 Aligned_cols=19 Identities=37% Similarity=0.702 Sum_probs=12.0
Q ss_pred CcchhhHHHHHHHHHHHHHH
Q 020966 1 MASSISYLFVTLILTIISLL 20 (319)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~ 20 (319)
|+|. .+++|.++||++|++
T Consensus 1 MaSK-~~llL~l~LA~lLli 19 (95)
T PF07172_consen 1 MASK-AFLLLGLLLAALLLI 19 (95)
T ss_pred Cchh-HHHHHHHHHHHHHHH
Confidence 8866 455666666665654
No 23
>PRK05269 transaldolase B; Provisional
Probab=52.49 E-value=39 Score=32.81 Aligned_cols=52 Identities=13% Similarity=0.101 Sum_probs=31.4
Q ss_pred cCCCceeecCCCCCCCCccccccccCCC---CCCCCHHHHHHHHHHcCCCccCce
Q 020966 138 LGGPTWTVPLGRRDARTASQSAANSQIP---GPSSSLATLISMFAAKGLTAQDMT 189 (319)
Q Consensus 138 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP---~p~~~~~~l~~~F~~~Gl~~~dlV 189 (319)
+|-..+..+.||.|...-...+....-+ ++-..+.++.+.|++.|+..+-|.
T Consensus 170 AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~t~im~ 224 (318)
T PRK05269 170 AGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYYKKHGYKTVVMG 224 (318)
T ss_pred cCCCEEEeeccHHHHHhhhcccccccCcCCCcHHHHHHHHHHHHHHcCCCceEEe
Confidence 5778899999999864221111000011 123457888889999999765333
No 24
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=50.72 E-value=13 Score=28.76 Aligned_cols=18 Identities=28% Similarity=0.431 Sum_probs=15.5
Q ss_pred hHHHHHHHHHHHhhcCCC
Q 020966 286 SFARDFAAAMVKMGNISP 303 (319)
Q Consensus 286 ~F~~~Fa~Am~Km~~lgv 303 (319)
...+.|..||.||+.||.
T Consensus 2 ~m~~~F~~am~KlavLG~ 19 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGH 19 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS
T ss_pred hHHHHHHHHHHHHHHhcC
Confidence 356899999999999976
No 25
>PRK01844 hypothetical protein; Provisional
Probab=45.86 E-value=26 Score=26.63 Aligned_cols=29 Identities=21% Similarity=0.342 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhhCCCchhhHHHHhhhccC
Q 020966 43 IARDEMTKAVNRQPRNAASILRLFFHDCF 71 (319)
Q Consensus 43 iV~~~v~~~~~~~~~~a~~llRl~FHDc~ 71 (319)
+-|+.+++.++++|.+-...||.-+--.+
T Consensus 24 ~ark~~~k~lk~NPpine~mir~Mm~QMG 52 (72)
T PRK01844 24 IARKYMMNYLQKNPPINEQMLKMMMMQMG 52 (72)
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHhC
Confidence 47899999999999999999999887663
No 26
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.10 E-value=53 Score=24.87 Aligned_cols=30 Identities=23% Similarity=0.382 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhhCCCchhhHHHHhhhccC
Q 020966 42 RIARDEMTKAVNRQPRNAASILRLFFHDCF 71 (319)
Q Consensus 42 ~iV~~~v~~~~~~~~~~a~~llRl~FHDc~ 71 (319)
-+.|+.+++.++++|.+-...||+.+--.+
T Consensus 23 fiark~~~k~lk~NPpine~~iR~M~~qmG 52 (71)
T COG3763 23 FIARKQMKKQLKDNPPINEEMIRMMMAQMG 52 (71)
T ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHHHhC
Confidence 478999999999999999999999987664
No 27
>PRK00523 hypothetical protein; Provisional
Probab=37.74 E-value=45 Score=25.36 Aligned_cols=29 Identities=10% Similarity=0.335 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhhCCCchhhHHHHhhhccC
Q 020966 43 IARDEMTKAVNRQPRNAASILRLFFHDCF 71 (319)
Q Consensus 43 iV~~~v~~~~~~~~~~a~~llRl~FHDc~ 71 (319)
+-|+.+++.++++|.+-...||.-+--.+
T Consensus 25 iark~~~k~l~~NPpine~mir~M~~QMG 53 (72)
T PRK00523 25 VSKKMFKKQIRENPPITENMIRAMYMQMG 53 (72)
T ss_pred HHHHHHHHHHHHCcCCCHHHHHHHHHHhC
Confidence 57899999999999999999999887663
No 28
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=31.01 E-value=35 Score=28.99 Aligned_cols=33 Identities=36% Similarity=0.521 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHcCCCccCcee-eccCccccccc
Q 020966 169 SSLATLISMFAAKGLTAQDMTV-LSGGHAIGFAR 201 (319)
Q Consensus 169 ~~~~~l~~~F~~~Gl~~~dlVa-LsGaHTiG~~h 201 (319)
+++.+.+-.|+++||++.++=+ |--+|-||+++
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhh
Confidence 4566667789999999998755 44899999886
No 29
>PRK01362 putative translaldolase; Provisional
Probab=26.06 E-value=54 Score=29.98 Aligned_cols=43 Identities=12% Similarity=0.185 Sum_probs=30.3
Q ss_pred cCCCceeecCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccCcee
Q 020966 138 LGGPTWTVPLGRRDARTASQSAANSQIPGPSSSLATLISMFAAKGLTAQDMTV 190 (319)
Q Consensus 138 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVa 190 (319)
+|--++..+.||.|...- ++..-+.++.+.+++.|+..+=|+|
T Consensus 121 aGa~yispyvgRi~d~g~----------dg~~~i~~~~~~~~~~~~~tkilaA 163 (214)
T PRK01362 121 AGATYVSPFVGRLDDIGT----------DGMELIEDIREIYDNYGFDTEIIAA 163 (214)
T ss_pred cCCcEEEeecchHhhcCC----------CHHHHHHHHHHHHHHcCCCcEEEEe
Confidence 355678999999986421 2344577888899999987664544
No 30
>PRK13859 type IV secretion system lipoprotein VirB7; Provisional
Probab=21.56 E-value=65 Score=22.95 Aligned_cols=31 Identities=29% Similarity=0.470 Sum_probs=23.3
Q ss_pred HHHHhhh---hhhhccCCCceeecCCCCCCCCcc
Q 020966 126 ILAVAAR---DGVALLGGPTWTVPLGRRDARTAS 156 (319)
Q Consensus 126 iialAar---~Av~~~GGP~~~v~~GR~D~~~s~ 156 (319)
+++||+- |-...+.||.+++-.||.-...|.
T Consensus 9 ~l~La~CqT~D~lAtckGpiFpLNVgrWqptpsD 42 (55)
T PRK13859 9 ALALAGCQTNDTLASCKGPIFPLNVGRWQPTPSD 42 (55)
T ss_pred HHHHHhccccCccccccCCccccccccccCChhh
Confidence 5666663 556678999999999998765543
Done!