Query 020968
Match_columns 319
No_of_seqs 178 out of 2284
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 06:34:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020968.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020968hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0259 Tyrosine aminotransfer 100.0 4.2E-50 9.1E-55 346.4 29.9 301 9-309 25-325 (447)
2 PLN00145 tyrosine/nicotianamin 100.0 1.9E-48 4.2E-53 363.2 33.7 309 1-309 1-316 (430)
3 COG0436 Aspartate/tyrosine/aro 100.0 6.3E-48 1.4E-52 353.8 30.1 275 24-310 7-285 (393)
4 PLN02187 rooty/superroot1 100.0 1.6E-47 3.4E-52 359.5 31.3 297 9-308 30-329 (462)
5 PLN00143 tyrosine/nicotianamin 100.0 6.4E-45 1.4E-49 338.1 31.4 281 28-308 15-295 (409)
6 PLN02656 tyrosine transaminase 100.0 8.5E-45 1.8E-49 337.4 31.4 281 28-308 13-294 (409)
7 PRK13355 bifunctional HTH-doma 100.0 2.1E-43 4.6E-48 336.7 30.4 290 12-308 115-404 (517)
8 PLN00175 aminotransferase fami 100.0 7.1E-43 1.5E-47 324.5 32.5 280 12-313 28-310 (413)
9 PRK08068 transaminase; Reviewe 100.0 5.4E-43 1.2E-47 323.6 31.2 287 14-314 3-292 (389)
10 PLN02368 alanine transaminase 100.0 1.9E-43 4.1E-48 326.1 26.7 286 15-307 10-339 (407)
11 PRK07681 aspartate aminotransf 100.0 1.4E-42 2.9E-47 321.9 31.6 284 16-314 5-291 (399)
12 TIGR03540 DapC_direct LL-diami 100.0 1.3E-42 2.8E-47 320.6 30.9 286 16-315 2-290 (383)
13 PRK07366 succinyldiaminopimela 100.0 8.5E-43 1.8E-47 322.3 29.6 283 17-314 4-291 (388)
14 KOG0257 Kynurenine aminotransf 100.0 3.5E-43 7.6E-48 308.5 25.0 247 50-308 36-291 (420)
15 TIGR01264 tyr_amTase_E tyrosin 100.0 2.8E-42 6E-47 320.1 31.2 292 12-309 1-292 (401)
16 TIGR01265 tyr_nico_aTase tyros 100.0 4.7E-42 1E-46 318.6 32.0 293 12-308 1-293 (403)
17 PTZ00433 tyrosine aminotransfe 100.0 4.6E-42 9.9E-47 319.5 31.5 287 17-309 9-301 (412)
18 PRK06855 aminotransferase; Val 100.0 2.1E-42 4.5E-47 323.2 29.0 263 43-307 30-295 (433)
19 PRK09276 LL-diaminopimelate am 100.0 6.7E-42 1.5E-46 316.0 31.4 285 16-314 4-291 (385)
20 PRK09147 succinyldiaminopimela 100.0 5.1E-42 1.1E-46 317.9 29.5 275 19-308 4-291 (396)
21 PRK06207 aspartate aminotransf 100.0 7.9E-42 1.7E-46 317.0 30.7 276 23-309 16-298 (405)
22 PRK06348 aspartate aminotransf 100.0 9.6E-42 2.1E-46 314.7 30.7 273 17-309 7-281 (384)
23 PRK05942 aspartate aminotransf 100.0 1E-41 2.2E-46 315.5 30.7 284 10-308 3-289 (394)
24 PRK08960 hypothetical protein; 100.0 2.7E-41 5.9E-46 312.1 32.3 276 15-308 4-280 (387)
25 PRK06290 aspartate aminotransf 100.0 2.2E-41 4.8E-46 313.9 30.4 258 42-314 41-302 (410)
26 PRK08636 aspartate aminotransf 100.0 3.5E-41 7.6E-46 312.8 31.5 283 18-314 8-300 (403)
27 PRK09148 aminotransferase; Val 100.0 5E-41 1.1E-45 311.8 31.1 282 19-314 6-290 (405)
28 PTZ00377 alanine aminotransfer 100.0 5.3E-41 1.1E-45 317.8 28.7 288 15-307 9-347 (481)
29 PRK09265 aminotransferase AlaT 100.0 1.8E-40 3.9E-45 308.2 31.6 287 15-308 5-291 (404)
30 PRK06107 aspartate aminotransf 100.0 1.3E-40 2.8E-45 308.9 30.3 285 15-314 5-293 (402)
31 PRK12414 putative aminotransfe 100.0 3E-40 6.5E-45 304.7 30.3 252 44-309 28-282 (384)
32 PRK07550 hypothetical protein; 100.0 3.2E-40 6.9E-45 304.9 30.4 278 16-307 2-281 (386)
33 PRK07683 aminotransferase A; V 100.0 6.4E-40 1.4E-44 302.8 32.0 274 16-310 5-281 (387)
34 TIGR03538 DapC_gpp succinyldia 100.0 2.5E-40 5.5E-45 306.2 28.9 273 20-307 4-289 (393)
35 PRK08361 aspartate aminotransf 100.0 4.3E-40 9.2E-45 304.5 29.4 276 14-309 8-284 (391)
36 PRK08912 hypothetical protein; 100.0 6E-40 1.3E-44 303.2 30.3 276 18-314 6-284 (387)
37 PRK07337 aminotransferase; Val 100.0 1E-39 2.2E-44 301.8 31.2 275 16-308 3-278 (388)
38 PRK06108 aspartate aminotransf 100.0 7.1E-40 1.5E-44 302.3 30.1 278 17-313 2-283 (382)
39 PRK05957 aspartate aminotransf 100.0 1.8E-39 3.8E-44 300.1 31.6 278 16-313 4-284 (389)
40 PRK09082 methionine aminotrans 100.0 5.1E-40 1.1E-44 303.4 27.9 277 17-314 9-288 (386)
41 PRK08363 alanine aminotransfer 100.0 1.2E-39 2.5E-44 302.3 30.3 286 17-314 5-294 (398)
42 PRK07682 hypothetical protein; 100.0 5.9E-40 1.3E-44 302.3 28.0 251 45-309 20-273 (378)
43 PRK07568 aspartate aminotransf 100.0 1.6E-39 3.5E-44 301.4 30.9 283 15-313 2-286 (397)
44 PRK07309 aromatic amino acid a 100.0 1.5E-39 3.3E-44 300.7 30.6 273 16-309 7-284 (391)
45 PRK05764 aspartate aminotransf 100.0 2.3E-39 5E-44 300.0 30.6 279 15-308 3-284 (393)
46 PRK07777 aminotransferase; Val 100.0 3E-39 6.4E-44 298.6 30.7 276 19-314 5-284 (387)
47 PRK07590 L,L-diaminopimelate a 100.0 1.6E-39 3.4E-44 302.3 28.4 260 30-308 19-307 (409)
48 PRK05839 hypothetical protein; 100.0 2.4E-39 5.1E-44 297.6 29.0 249 43-309 22-279 (374)
49 PRK09257 aromatic amino acid a 100.0 4.1E-40 8.9E-45 305.1 23.7 281 19-307 4-298 (396)
50 COG1168 MalY Bifunctional PLP- 100.0 2.6E-39 5.6E-44 281.5 24.8 260 44-317 24-289 (388)
51 PLN02231 alanine transaminase 100.0 6.7E-39 1.4E-43 304.4 29.1 269 22-309 113-400 (534)
52 COG1167 ARO8 Transcriptional r 100.0 3E-39 6.5E-44 302.6 26.3 259 44-317 88-352 (459)
53 TIGR03537 DapC succinyldiamino 100.0 6.2E-39 1.4E-43 292.5 27.7 246 47-308 2-252 (350)
54 PLN02450 1-aminocyclopropane-1 100.0 3.9E-39 8.4E-44 303.2 23.4 256 44-313 37-321 (468)
55 PTZ00376 aspartate aminotransf 100.0 3.8E-39 8.3E-44 299.1 23.0 279 19-308 7-304 (404)
56 PRK08175 aminotransferase; Val 100.0 4.4E-38 9.5E-43 291.4 29.8 250 44-308 28-283 (395)
57 PRK07324 transaminase; Validat 100.0 6.2E-39 1.4E-43 294.6 23.2 243 43-307 24-267 (373)
58 PRK01533 histidinol-phosphate 100.0 4.8E-39 1E-43 294.3 20.8 247 43-316 27-273 (366)
59 PLN02376 1-aminocyclopropane-1 100.0 6.7E-38 1.4E-42 295.9 26.7 259 44-313 45-328 (496)
60 PLN02607 1-aminocyclopropane-1 100.0 7.1E-38 1.5E-42 292.6 25.6 258 43-314 45-329 (447)
61 PRK09275 aspartate aminotransf 100.0 6.6E-38 1.4E-42 294.2 24.3 234 27-272 75-328 (527)
62 PRK02610 histidinol-phosphate 100.0 6.4E-38 1.4E-42 288.2 23.7 249 45-314 28-284 (374)
63 TIGR03542 DAPAT_plant LL-diami 100.0 6.9E-37 1.5E-41 284.0 28.3 246 42-308 30-300 (402)
64 PRK06836 aspartate aminotransf 100.0 3.6E-36 7.7E-41 278.5 31.6 273 27-308 15-297 (394)
65 PRK06358 threonine-phosphate d 100.0 2.2E-37 4.8E-42 282.5 23.2 239 45-307 19-257 (354)
66 PRK07865 N-succinyldiaminopime 100.0 6.9E-37 1.5E-41 280.5 26.3 261 16-308 3-269 (364)
67 PRK15481 transcriptional regul 100.0 4.4E-37 9.6E-42 287.7 24.3 244 45-313 85-331 (431)
68 PF00155 Aminotran_1_2: Aminot 100.0 1.3E-37 2.8E-42 285.2 20.1 257 46-311 2-268 (363)
69 PRK14809 histidinol-phosphate 100.0 3.6E-37 7.8E-42 281.7 22.9 238 44-308 29-266 (357)
70 PRK03158 histidinol-phosphate 100.0 2.4E-37 5.1E-42 283.1 20.7 245 44-315 28-272 (359)
71 PLN02397 aspartate transaminas 100.0 1.1E-36 2.4E-41 283.7 25.2 281 20-308 27-322 (423)
72 PRK03317 histidinol-phosphate 100.0 5.1E-37 1.1E-41 281.8 21.4 248 46-313 27-277 (368)
73 TIGR03801 asp_4_decarbox aspar 100.0 5.7E-36 1.2E-40 280.8 25.5 234 27-272 69-327 (521)
74 PRK05166 histidinol-phosphate 100.0 1.5E-36 3.3E-41 278.9 21.0 244 43-310 34-278 (371)
75 TIGR03539 DapC_actino succinyl 100.0 1.8E-35 4E-40 270.3 27.7 252 27-307 5-262 (357)
76 PRK06225 aspartate aminotransf 100.0 1.2E-35 2.5E-40 273.9 26.3 248 44-313 27-275 (380)
77 PRK09440 avtA valine--pyruvate 100.0 1.4E-35 3.1E-40 276.5 26.4 256 43-314 28-299 (416)
78 PRK08056 threonine-phosphate d 100.0 6E-36 1.3E-40 273.4 21.9 245 43-314 18-262 (356)
79 COG0079 HisC Histidinol-phosph 100.0 1.5E-35 3.2E-40 267.7 23.0 238 44-310 21-258 (356)
80 PRK07392 threonine-phosphate d 100.0 1.9E-35 4.2E-40 270.5 23.9 244 43-315 20-266 (360)
81 PRK09105 putative aminotransfe 100.0 1E-35 2.3E-40 272.8 22.0 239 44-314 42-281 (370)
82 PRK03321 putative aminotransfe 100.0 7.7E-36 1.7E-40 272.4 19.2 246 45-315 22-267 (352)
83 PRK08153 histidinol-phosphate 100.0 3.2E-35 7E-40 269.7 23.3 242 44-315 31-273 (369)
84 PLN03026 histidinol-phosphate 100.0 3E-35 6.6E-40 270.8 22.2 238 44-314 51-289 (380)
85 PLN02672 methionine S-methyltr 100.0 6.6E-35 1.4E-39 289.4 25.8 246 43-305 695-952 (1082)
86 PRK08637 hypothetical protein; 100.0 1.6E-34 3.4E-39 266.9 25.8 265 46-316 4-290 (388)
87 PRK14807 histidinol-phosphate 100.0 1.1E-34 2.3E-39 264.7 24.1 241 44-314 21-262 (351)
88 PRK04870 histidinol-phosphate 100.0 4.4E-35 9.6E-40 267.8 21.4 234 44-307 25-260 (356)
89 PRK05387 histidinol-phosphate 100.0 7.5E-35 1.6E-39 266.0 21.5 233 44-308 23-257 (353)
90 PRK02731 histidinol-phosphate 100.0 1.3E-34 2.8E-39 265.9 22.8 244 43-313 30-273 (367)
91 PRK03967 histidinol-phosphate 100.0 2.2E-34 4.7E-39 261.1 22.5 232 44-308 17-248 (337)
92 PRK14808 histidinol-phosphate 100.0 1.2E-33 2.5E-38 256.0 22.2 230 43-308 17-246 (335)
93 TIGR01141 hisC histidinol-phos 100.0 2.8E-33 6E-38 255.0 20.8 237 43-307 17-253 (346)
94 PRK04781 histidinol-phosphate 100.0 9.9E-33 2.1E-37 252.7 21.8 229 46-307 32-263 (364)
95 PRK08354 putative aminotransfe 100.0 4.6E-32 9.9E-37 243.3 24.9 217 44-309 7-223 (311)
96 PRK00950 histidinol-phosphate 100.0 1.2E-32 2.6E-37 252.3 21.5 234 44-308 33-267 (361)
97 PRK01688 histidinol-phosphate 100.0 4.3E-33 9.4E-38 254.0 18.4 229 45-308 28-257 (351)
98 PRK05664 threonine-phosphate d 100.0 5E-32 1.1E-36 245.0 23.1 216 45-307 20-235 (330)
99 PRK07908 hypothetical protein; 100.0 2.5E-31 5.5E-36 242.3 25.2 225 44-305 21-245 (349)
100 PRK06959 putative threonine-ph 100.0 8E-32 1.7E-36 244.3 21.5 223 45-315 24-248 (339)
101 PRK06425 histidinol-phosphate 100.0 1.1E-31 2.4E-36 242.9 21.0 215 46-302 17-231 (332)
102 PRK04635 histidinol-phosphate 100.0 4.4E-32 9.5E-37 247.8 18.5 227 45-308 31-258 (354)
103 TIGR01140 L_thr_O3P_dcar L-thr 100.0 6.5E-31 1.4E-35 237.7 20.6 227 44-314 16-243 (330)
104 KOG0256 1-aminocyclopropane-1- 100.0 1.3E-30 2.8E-35 227.7 19.2 227 80-315 114-354 (471)
105 cd00609 AAT_like Aspartate ami 100.0 8.5E-28 1.8E-32 218.5 27.3 250 48-308 1-251 (350)
106 KOG0634 Aromatic amino acid am 100.0 2.7E-28 5.8E-33 214.9 17.9 282 8-307 4-339 (472)
107 PRK13238 tnaA tryptophanase/L- 100.0 4.1E-28 8.8E-33 227.0 20.2 265 19-309 12-311 (460)
108 COG3977 Alanine-alpha-ketoisov 99.9 6.7E-26 1.4E-30 191.0 20.7 262 26-314 14-299 (417)
109 COG1448 TyrB Aspartate/tyrosin 99.9 7E-26 1.5E-30 197.8 18.9 280 19-311 4-301 (396)
110 KOG0258 Alanine aminotransfera 99.9 2E-25 4.3E-30 194.1 18.5 268 32-304 32-341 (475)
111 cd00617 Tnase_like Tryptophana 99.9 1.2E-24 2.7E-29 201.1 18.4 223 43-288 9-259 (431)
112 TIGR01822 2am3keto_CoA 2-amino 99.9 3E-23 6.4E-28 192.3 25.3 213 43-288 36-263 (393)
113 PRK07049 methionine gamma-lyas 99.9 9.6E-23 2.1E-27 189.6 23.2 194 81-305 78-285 (427)
114 cd06502 TA_like Low-specificit 99.9 2.3E-23 5E-28 189.0 18.0 221 61-307 8-241 (338)
115 PRK06939 2-amino-3-ketobutyrat 99.9 1.3E-22 2.8E-27 188.1 23.1 218 43-288 40-267 (397)
116 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.1E-22 4.5E-27 186.1 24.2 236 43-307 31-277 (385)
117 TIGR03576 pyridox_MJ0158 pyrid 99.9 2.2E-22 4.7E-27 182.5 23.0 214 59-307 30-247 (346)
118 TIGR00858 bioF 8-amino-7-oxono 99.9 2.3E-22 5E-27 183.9 22.9 214 43-288 14-239 (360)
119 PRK10874 cysteine sulfinate de 99.9 5.1E-22 1.1E-26 184.5 24.2 202 45-271 18-236 (401)
120 TIGR03392 FeS_syn_CsdA cystein 99.9 2.5E-22 5.5E-27 186.4 22.0 203 45-271 15-233 (398)
121 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.6E-22 5.7E-27 183.8 21.7 202 61-289 11-226 (361)
122 PLN02242 methionine gamma-lyas 99.9 4.2E-22 9.1E-27 184.7 19.6 185 86-305 75-269 (418)
123 PLN02822 serine palmitoyltrans 99.9 7.3E-22 1.6E-26 186.4 20.2 240 43-307 107-360 (481)
124 PRK09295 bifunctional cysteine 99.9 1.9E-21 4E-26 181.0 22.5 203 45-271 22-240 (406)
125 PRK06234 methionine gamma-lyas 99.9 8.8E-22 1.9E-26 182.1 19.6 169 85-287 62-237 (400)
126 KOG0633 Histidinol phosphate a 99.9 1.6E-22 3.4E-27 167.6 12.8 228 44-307 40-270 (375)
127 PRK05958 8-amino-7-oxononanoat 99.9 5.3E-21 1.2E-25 176.6 24.4 218 43-288 37-261 (385)
128 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 6.2E-21 1.3E-25 175.2 24.2 201 62-289 19-233 (370)
129 TIGR01976 am_tr_V_VC1184 cyste 99.9 3.9E-21 8.4E-26 178.3 22.0 200 47-271 18-231 (397)
130 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3.5E-21 7.6E-26 177.9 21.6 204 45-271 18-235 (387)
131 TIGR01979 sufS cysteine desulf 99.9 6.3E-21 1.4E-25 177.3 23.3 203 44-271 16-235 (403)
132 PRK10534 L-threonine aldolase; 99.9 7.9E-22 1.7E-26 178.7 16.8 212 48-291 2-223 (333)
133 TIGR00707 argD acetylornithine 99.9 2E-21 4.4E-26 179.1 19.5 242 43-307 25-283 (379)
134 PLN02855 Bifunctional selenocy 99.9 4.2E-21 9E-26 179.6 21.8 203 45-271 31-249 (424)
135 PRK02627 acetylornithine amino 99.9 3.7E-21 8.1E-26 178.4 20.7 243 43-307 37-295 (396)
136 PLN02721 threonine aldolase 99.9 3.1E-21 6.8E-26 176.1 19.0 215 45-290 5-233 (353)
137 TIGR02080 O_succ_thio_ly O-suc 99.9 8.3E-21 1.8E-25 174.4 21.4 190 80-303 45-240 (382)
138 PRK08133 O-succinylhomoserine 99.9 1.2E-20 2.6E-25 174.0 22.5 183 87-302 61-248 (390)
139 cd00378 SHMT Serine-glycine hy 99.9 1.5E-20 3.3E-25 174.7 23.4 218 45-290 19-250 (402)
140 PRK07179 hypothetical protein; 99.9 2.6E-20 5.7E-25 173.3 24.8 214 43-288 52-273 (407)
141 PRK13392 5-aminolevulinate syn 99.9 1.5E-20 3.2E-25 175.2 22.9 231 45-307 46-292 (410)
142 PRK08249 cystathionine gamma-s 99.9 1.4E-20 3E-25 173.7 21.7 185 86-303 63-252 (398)
143 KOG1411 Aspartate aminotransfe 99.9 1.4E-21 3.1E-26 167.8 13.5 295 9-312 24-329 (427)
144 PRK07504 O-succinylhomoserine 99.9 2.6E-20 5.6E-25 172.2 22.9 194 46-271 30-227 (398)
145 PRK08045 cystathionine gamma-s 99.9 2E-20 4.4E-25 172.0 22.1 192 80-305 46-243 (386)
146 cd00613 GDC-P Glycine cleavage 99.9 1.9E-20 4.1E-25 173.8 22.0 206 44-271 19-240 (398)
147 cd06454 KBL_like KBL_like; thi 99.9 5.5E-20 1.2E-24 167.6 23.9 211 46-288 2-224 (349)
148 PRK07503 methionine gamma-lyas 99.9 2.9E-20 6.3E-25 172.1 22.1 183 87-303 65-255 (403)
149 PRK08776 cystathionine gamma-s 99.9 2.7E-20 5.9E-25 172.1 21.5 185 88-305 61-251 (405)
150 PRK07811 cystathionine gamma-s 99.9 2.9E-20 6.3E-25 171.3 21.6 174 85-291 59-237 (388)
151 PRK02948 cysteine desulfurase; 99.9 2.6E-20 5.7E-25 171.9 21.3 198 48-271 2-214 (381)
152 PRK07050 cystathionine beta-ly 99.9 2.9E-20 6.3E-25 171.5 21.3 188 81-302 60-253 (394)
153 PRK01278 argD acetylornithine 99.9 1.9E-20 4.2E-25 173.2 20.2 244 43-307 29-288 (389)
154 PRK08247 cystathionine gamma-s 99.9 2.5E-20 5.5E-25 170.7 20.7 191 80-305 46-242 (366)
155 PLN02483 serine palmitoyltrans 99.9 4.2E-20 9E-25 174.8 22.0 233 44-305 99-354 (489)
156 PRK03244 argD acetylornithine 99.9 1.2E-20 2.7E-25 175.1 17.8 246 43-316 41-307 (398)
157 PRK07810 O-succinylhomoserine 99.9 3.7E-20 8.1E-25 171.2 20.7 210 62-305 46-261 (403)
158 PRK08861 cystathionine gamma-s 99.9 5.7E-20 1.2E-24 168.6 21.4 187 82-302 49-241 (388)
159 TIGR01328 met_gam_lyase methio 99.9 3.2E-20 6.9E-25 171.2 19.6 173 82-288 55-231 (391)
160 cd06451 AGAT_like Alanine-glyo 99.9 4.7E-20 1E-24 168.6 20.5 190 61-271 8-201 (356)
161 TIGR01977 am_tr_V_EF2568 cyste 99.9 5.7E-20 1.2E-24 169.3 21.1 201 49-271 2-214 (376)
162 PRK06460 hypothetical protein; 99.9 6.1E-20 1.3E-24 168.5 20.9 172 86-291 44-220 (376)
163 PRK06767 methionine gamma-lyas 99.9 1.3E-19 2.8E-24 167.1 22.8 188 81-303 56-250 (386)
164 cd06453 SufS_like Cysteine des 99.9 5E-20 1.1E-24 169.5 20.1 190 62-271 10-215 (373)
165 cd00614 CGS_like CGS_like: Cys 99.9 7.3E-20 1.6E-24 168.0 20.9 186 85-303 38-229 (369)
166 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.8E-19 3.8E-24 165.9 22.5 175 81-290 49-228 (380)
167 COG0520 csdA Selenocysteine ly 99.8 3E-19 6.5E-24 164.2 23.1 217 27-271 7-239 (405)
168 TIGR01821 5aminolev_synth 5-am 99.8 4E-19 8.7E-24 165.1 24.2 231 45-307 45-291 (402)
169 PRK08574 cystathionine gamma-s 99.8 1.6E-19 3.4E-24 166.2 21.0 179 86-298 52-236 (385)
170 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.8E-19 3.9E-24 165.3 21.3 195 64-290 10-208 (376)
171 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 7.5E-20 1.6E-24 170.2 18.8 159 87-271 57-219 (418)
172 cd00615 Orn_deC_like Ornithine 99.8 8.5E-20 1.8E-24 162.5 17.9 170 85-270 57-233 (294)
173 PRK09028 cystathionine beta-ly 99.8 4E-19 8.6E-24 163.0 22.6 206 61-302 35-248 (394)
174 PRK09064 5-aminolevulinate syn 99.8 6.1E-19 1.3E-23 164.2 24.0 232 44-307 45-292 (407)
175 PF12897 Aminotran_MocR: Alani 99.8 1.4E-19 2.9E-24 159.0 17.8 266 24-310 2-300 (425)
176 TIGR01437 selA_rel uncharacter 99.8 2.3E-19 5E-24 164.1 20.2 196 44-270 7-222 (363)
177 KOG1549 Cysteine desulfurase N 99.8 3.1E-19 6.7E-24 159.7 19.2 205 42-271 39-257 (428)
178 PRK14012 cysteine desulfurase; 99.8 4.5E-19 9.9E-24 164.8 20.8 201 47-272 4-221 (404)
179 PLN02409 serine--glyoxylate am 99.8 4.7E-19 1E-23 164.4 20.8 192 62-271 19-216 (401)
180 TIGR02006 IscS cysteine desulf 99.8 6.9E-19 1.5E-23 163.5 21.5 201 47-272 4-219 (402)
181 PRK05939 hypothetical protein; 99.8 6.4E-19 1.4E-23 162.6 20.2 157 89-271 49-208 (397)
182 cd00610 OAT_like Acetyl ornith 99.8 5.3E-19 1.1E-23 164.9 19.9 246 43-307 34-306 (413)
183 PRK07582 cystathionine gamma-l 99.8 6.9E-19 1.5E-23 161.1 19.6 188 80-305 45-238 (366)
184 PRK11658 UDP-4-amino-4-deoxy-L 99.8 1.8E-18 4E-23 159.2 22.0 193 64-289 13-207 (379)
185 PRK06702 O-acetylhomoserine am 99.8 1.1E-18 2.5E-23 161.4 20.4 153 87-264 61-222 (432)
186 TIGR03403 nifS_epsilon cystein 99.8 2.1E-18 4.5E-23 159.3 22.1 193 62-271 10-216 (382)
187 PRK13393 5-aminolevulinate syn 99.8 4.7E-18 1E-22 158.1 24.2 232 44-307 44-291 (406)
188 PRK08248 O-acetylhomoserine am 99.8 1.2E-18 2.5E-23 162.3 19.7 159 87-271 64-226 (431)
189 TIGR03402 FeS_nifS cysteine de 99.8 2E-18 4.4E-23 159.2 21.2 188 62-271 10-212 (379)
190 TIGR03235 DNA_S_dndA cysteine 99.8 2.4E-18 5.2E-23 157.2 21.2 191 62-272 9-215 (353)
191 cd06450 DOPA_deC_like DOPA dec 99.8 2E-19 4.3E-24 163.7 13.2 199 63-269 11-229 (345)
192 TIGR01324 cysta_beta_ly_B cyst 99.8 5.8E-18 1.2E-22 155.2 22.6 157 88-270 51-212 (377)
193 KOG1412 Aspartate aminotransfe 99.8 1.7E-18 3.8E-23 147.0 17.3 278 21-309 10-306 (410)
194 PLN02651 cysteine desulfurase 99.8 6.3E-18 1.4E-22 155.1 22.5 198 49-271 2-214 (364)
195 cd01494 AAT_I Aspartate aminot 99.8 2.8E-18 6E-23 139.6 17.8 166 89-269 2-169 (170)
196 TIGR01329 cysta_beta_ly_E cyst 99.8 4.8E-18 1E-22 156.1 21.5 175 82-290 40-221 (378)
197 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 8.3E-18 1.8E-22 154.8 22.3 192 65-289 11-206 (375)
198 PRK00011 glyA serine hydroxyme 99.8 5.3E-18 1.1E-22 158.3 21.2 218 44-290 24-254 (416)
199 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 8.1E-18 1.8E-22 153.6 22.0 190 61-271 8-202 (355)
200 PRK02936 argD acetylornithine 99.8 7.5E-18 1.6E-22 155.3 21.1 244 43-307 27-280 (377)
201 PLN03227 serine palmitoyltrans 99.8 4.1E-18 9E-23 157.4 19.3 231 48-307 1-254 (392)
202 PRK13479 2-aminoethylphosphona 99.8 6.3E-18 1.4E-22 155.3 20.4 190 61-271 14-208 (368)
203 PRK06084 O-acetylhomoserine am 99.8 4.3E-18 9.3E-23 158.3 19.3 159 87-271 58-220 (425)
204 PRK13520 L-tyrosine decarboxyl 99.8 1.4E-17 3E-22 153.1 21.7 197 62-271 31-235 (371)
205 PRK05093 argD bifunctional N-s 99.8 1E-17 2.3E-22 155.6 21.0 236 43-307 38-297 (403)
206 PRK07269 cystathionine gamma-s 99.8 9.1E-18 2E-22 153.3 20.0 189 81-302 49-239 (364)
207 PRK07671 cystathionine beta-ly 99.8 1.2E-17 2.5E-22 153.4 20.8 171 87-291 50-225 (377)
208 PRK00451 glycine dehydrogenase 99.8 7.7E-18 1.7E-22 158.6 20.0 201 46-271 69-284 (447)
209 PRK05968 hypothetical protein; 99.8 2.5E-17 5.4E-22 152.0 22.4 180 88-302 64-250 (389)
210 TIGR00713 hemL glutamate-1-sem 99.8 8.1E-18 1.8E-22 157.4 19.0 241 43-307 46-310 (423)
211 PRK08064 cystathionine beta-ly 99.8 1.9E-17 4.2E-22 152.7 21.0 170 88-291 55-229 (390)
212 PRK06176 cystathionine gamma-s 99.8 4.4E-17 9.6E-22 149.7 21.6 169 88-290 51-224 (380)
213 TIGR02326 transamin_PhnW 2-ami 99.8 3.7E-17 8.1E-22 149.9 20.5 165 89-271 37-206 (363)
214 PRK05967 cystathionine beta-ly 99.8 5.9E-17 1.3E-21 148.5 21.4 182 90-301 63-250 (395)
215 COG1104 NifS Cysteine sulfinat 99.8 2.3E-17 4.9E-22 147.2 18.0 197 48-269 3-215 (386)
216 PRK04366 glycine dehydrogenase 99.8 6.6E-17 1.4E-21 153.0 22.3 207 48-271 71-291 (481)
217 PRK04073 rocD ornithine--oxo-a 99.8 3.7E-17 8E-22 151.6 19.4 238 43-307 38-300 (396)
218 COG0156 BioF 7-keto-8-aminopel 99.8 8.1E-17 1.8E-21 145.8 20.9 214 44-289 38-265 (388)
219 PRK08134 O-acetylhomoserine am 99.8 5.2E-17 1.1E-21 151.2 19.8 157 88-270 65-225 (433)
220 PLN02509 cystathionine beta-ly 99.8 1.1E-16 2.3E-21 149.6 21.8 165 82-271 126-295 (464)
221 TIGR03812 tyr_de_CO2_Arch tyro 99.8 6.3E-17 1.4E-21 148.9 19.8 167 90-271 62-240 (373)
222 PRK15407 lipopolysaccharide bi 99.8 3.3E-16 7.1E-21 146.3 24.4 211 46-290 24-247 (438)
223 PRK00854 rocD ornithine--oxo-a 99.8 8.7E-17 1.9E-21 149.4 20.4 237 43-307 39-301 (401)
224 PLN02955 8-amino-7-oxononanoat 99.8 5.5E-16 1.2E-20 143.6 25.3 214 45-290 102-343 (476)
225 TIGR03588 PseC UDP-4-keto-6-de 99.8 3E-16 6.4E-21 144.8 22.9 194 64-289 9-210 (380)
226 PRK05994 O-acetylhomoserine am 99.7 1.1E-16 2.5E-21 149.1 19.6 157 88-270 64-224 (427)
227 PRK07505 hypothetical protein; 99.7 3.7E-16 8.1E-21 145.2 23.1 230 44-305 45-294 (402)
228 PF00266 Aminotran_5: Aminotra 99.7 3.5E-16 7.6E-21 143.9 22.5 199 48-271 1-215 (371)
229 PRK12381 bifunctional succinyl 99.7 1.7E-16 3.8E-21 147.5 20.1 243 43-307 37-296 (406)
230 cd00616 AHBA_syn 3-amino-5-hyd 99.7 2.3E-16 5E-21 143.9 20.5 187 69-289 3-193 (352)
231 PRK05937 8-amino-7-oxononanoat 99.7 2.3E-15 5.1E-20 138.3 24.0 198 44-262 3-219 (370)
232 PTZ00125 ornithine aminotransf 99.7 4.9E-16 1.1E-20 144.4 19.3 245 43-307 29-292 (400)
233 PRK07812 O-acetylhomoserine am 99.7 7.8E-16 1.7E-20 143.2 19.9 158 88-270 70-231 (436)
234 PRK08114 cystathionine beta-ly 99.7 1.4E-15 3.1E-20 139.3 21.1 182 87-302 62-251 (395)
235 PF01041 DegT_DnrJ_EryC1: DegT 99.7 6.9E-16 1.5E-20 141.4 19.2 193 65-290 5-201 (363)
236 TIGR03246 arg_catab_astC succi 99.7 1.7E-15 3.7E-20 140.4 21.1 237 43-307 33-292 (397)
237 PRK04260 acetylornithine amino 99.7 1.7E-15 3.7E-20 139.5 20.4 238 43-307 27-278 (375)
238 COG0399 WecE Predicted pyridox 99.7 2.5E-15 5.3E-20 135.2 20.4 195 63-291 13-211 (374)
239 PRK08088 4-aminobutyrate amino 99.7 1.2E-15 2.5E-20 142.7 19.1 247 43-307 39-312 (425)
240 PRK04311 selenocysteine syntha 99.7 6.2E-15 1.3E-19 137.8 23.4 200 61-286 96-314 (464)
241 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 2.6E-15 5.6E-20 137.3 20.4 184 88-302 56-245 (386)
242 TIGR03531 selenium_SpcS O-phos 99.7 4.7E-15 1E-19 137.3 21.2 202 90-307 104-316 (444)
243 TIGR01814 kynureninase kynuren 99.7 5.8E-15 1.3E-19 137.4 19.2 196 45-261 26-240 (406)
244 TIGR00474 selA seryl-tRNA(sec) 99.7 2.5E-14 5.4E-19 133.5 22.7 193 61-271 91-302 (454)
245 PF04864 Alliinase_C: Allinase 99.7 9.1E-17 2E-21 139.5 5.7 224 48-307 1-240 (363)
246 PRK00062 glutamate-1-semialdeh 99.7 4.2E-15 9E-20 138.9 17.1 241 43-307 48-312 (426)
247 KOG0053 Cystathionine beta-lya 99.7 1.2E-14 2.7E-19 130.1 19.2 184 88-303 78-266 (409)
248 TIGR02618 tyr_phenol_ly tyrosi 99.7 2.5E-14 5.4E-19 131.1 21.5 202 65-289 50-278 (450)
249 PRK05613 O-acetylhomoserine am 99.7 9.6E-15 2.1E-19 136.0 18.9 158 88-270 70-231 (437)
250 PLN00144 acetylornithine trans 99.6 1.4E-14 3E-19 133.5 18.6 253 43-317 13-292 (382)
251 PRK04612 argD acetylornithine 99.6 4.3E-14 9.2E-19 131.1 21.6 245 43-307 38-300 (408)
252 COG2008 GLY1 Threonine aldolas 99.6 7.1E-15 1.5E-19 128.7 14.7 214 48-290 2-225 (342)
253 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 4.7E-15 1E-19 135.3 13.7 192 85-291 64-274 (417)
254 PRK08360 4-aminobutyrate amino 99.6 1.4E-13 3.1E-18 128.8 23.6 247 43-307 39-317 (443)
255 TIGR01885 Orn_aminotrans ornit 99.6 4.4E-14 9.5E-19 131.3 20.0 237 43-307 35-300 (401)
256 COG0626 MetC Cystathionine bet 99.6 7E-14 1.5E-18 126.7 20.6 185 86-302 62-253 (396)
257 PF01212 Beta_elim_lyase: Beta 99.6 1.9E-15 4.1E-20 133.2 9.2 190 63-271 7-208 (290)
258 PLN02624 ornithine-delta-amino 99.6 9.2E-14 2E-18 131.3 21.1 236 44-307 74-338 (474)
259 TIGR01788 Glu-decarb-GAD gluta 99.6 1.4E-13 3.1E-18 127.9 21.5 201 62-271 52-276 (431)
260 TIGR00700 GABAtrnsam 4-aminobu 99.6 5.1E-14 1.1E-18 131.5 17.9 257 43-316 31-321 (420)
261 PRK06434 cystathionine gamma-l 99.6 1.5E-13 3.2E-18 126.0 20.2 167 87-289 64-235 (384)
262 PRK09792 4-aminobutyrate trans 99.6 2.1E-13 4.5E-18 127.2 21.3 255 43-315 38-321 (421)
263 PRK06918 4-aminobutyrate amino 99.6 2.8E-13 6E-18 127.6 21.1 256 44-316 53-343 (451)
264 PRK02769 histidine decarboxyla 99.6 5.3E-13 1.1E-17 122.4 21.8 173 90-271 64-246 (380)
265 PRK13034 serine hydroxymethylt 99.6 8.5E-13 1.8E-17 123.0 22.7 223 16-271 5-245 (416)
266 COG2873 MET17 O-acetylhomoseri 99.6 1.1E-13 2.4E-18 121.0 14.5 158 87-270 62-223 (426)
267 PRK15029 arginine decarboxylas 99.5 4.2E-13 9.1E-18 131.0 19.4 193 84-291 202-421 (755)
268 KOG1368 Threonine aldolase [Am 99.5 1.2E-13 2.7E-18 117.1 13.5 218 45-291 21-251 (384)
269 PRK06777 4-aminobutyrate amino 99.5 5.4E-13 1.2E-17 124.5 19.3 247 43-307 38-311 (421)
270 COG1103 Archaea-specific pyrid 99.5 2.1E-12 4.5E-17 108.4 20.2 205 44-271 14-233 (382)
271 PRK13237 tyrosine phenol-lyase 99.5 1E-12 2.2E-17 120.8 20.0 185 82-289 73-285 (460)
272 COG0076 GadB Glutamate decarbo 99.5 1.3E-12 2.8E-17 122.0 20.6 204 62-272 73-292 (460)
273 PLN03032 serine decarboxylase; 99.5 3.8E-12 8.3E-17 116.1 21.5 172 89-271 64-249 (374)
274 PLN02414 glycine dehydrogenase 99.5 7E-13 1.5E-17 132.8 17.8 162 90-270 571-748 (993)
275 COG0075 Serine-pyruvate aminot 99.5 2.1E-12 4.5E-17 116.3 18.0 188 62-270 15-207 (383)
276 PRK03715 argD acetylornithine 99.5 5.8E-12 1.3E-16 116.5 20.6 216 43-271 34-263 (395)
277 PLN02724 Molybdenum cofactor s 99.5 2.5E-12 5.3E-17 128.9 19.2 207 46-271 34-277 (805)
278 COG4992 ArgD Ornithine/acetylo 99.5 1.6E-12 3.4E-17 116.3 15.7 244 43-315 40-307 (404)
279 PRK07495 4-aminobutyrate amino 99.5 4.4E-12 9.4E-17 118.4 19.4 256 43-316 38-322 (425)
280 PRK08117 4-aminobutyrate amino 99.5 4.9E-12 1.1E-16 118.7 19.5 247 43-307 41-320 (433)
281 PRK05964 adenosylmethionine--8 99.5 4.1E-12 8.9E-17 118.8 18.0 257 43-316 40-331 (423)
282 PTZ00094 serine hydroxymethylt 99.4 8.7E-12 1.9E-16 117.5 19.7 202 44-271 33-259 (452)
283 PRK13580 serine hydroxymethylt 99.4 3.8E-11 8.3E-16 111.8 22.2 218 45-288 49-309 (493)
284 PRK06058 4-aminobutyrate amino 99.4 4.1E-11 8.9E-16 112.6 22.1 247 44-307 55-332 (443)
285 PRK13578 ornithine decarboxyla 99.4 6.5E-12 1.4E-16 121.7 16.9 171 85-270 172-368 (720)
286 cd00611 PSAT_like Phosphoserin 99.4 4.9E-12 1.1E-16 115.6 14.7 185 61-271 8-207 (355)
287 PLN02590 probable tyrosine dec 99.4 5E-11 1.1E-15 113.3 21.5 202 64-272 144-371 (539)
288 TIGR00709 dat 2,4-diaminobutyr 99.4 7.7E-11 1.7E-15 110.7 21.8 255 43-314 37-327 (442)
289 PF06838 Met_gamma_lyase: Meth 99.4 6.3E-11 1.4E-15 104.2 19.0 200 65-288 27-248 (403)
290 PLN02263 serine decarboxylase 99.4 2.3E-10 5.1E-15 106.3 23.5 177 88-271 130-316 (470)
291 PLN02880 tyrosine decarboxylas 99.4 3.2E-11 7E-16 114.2 17.9 232 27-271 61-322 (490)
292 PRK15400 lysine decarboxylase 99.3 2.6E-11 5.7E-16 117.4 16.1 189 85-291 193-399 (714)
293 PRK09264 diaminobutyrate--2-ox 99.3 2E-10 4.4E-15 107.4 21.3 222 43-271 37-283 (425)
294 PRK03080 phosphoserine aminotr 99.3 1.7E-11 3.7E-16 113.0 13.7 189 45-270 11-208 (378)
295 PLN02271 serine hydroxymethylt 99.3 1.1E-09 2.4E-14 102.8 25.5 207 45-271 148-375 (586)
296 PRK15399 lysine decarboxylase 99.3 1.2E-10 2.7E-15 112.8 19.0 188 85-291 193-399 (713)
297 PRK08593 4-aminobutyrate amino 99.3 3.4E-10 7.4E-15 106.3 21.4 256 43-315 40-330 (445)
298 PLN03226 serine hydroxymethylt 99.3 9.2E-10 2E-14 103.9 23.7 206 45-271 34-260 (475)
299 TIGR02407 ectoine_ectB diamino 99.3 3.1E-10 6.8E-15 105.7 20.4 220 43-271 33-279 (412)
300 PLN02994 1-aminocyclopropane-1 99.3 6.8E-12 1.5E-16 99.9 7.9 98 43-146 41-153 (153)
301 TIGR00461 gcvP glycine dehydro 99.3 2.4E-10 5.1E-15 113.7 20.1 174 81-270 517-710 (939)
302 PF00282 Pyridoxal_deC: Pyrido 99.3 2.6E-10 5.6E-15 104.5 18.7 198 65-272 54-278 (373)
303 PRK06541 hypothetical protein; 99.3 7.7E-10 1.7E-14 104.3 21.9 219 43-271 50-306 (460)
304 PRK04013 argD acetylornithine/ 99.3 3.4E-10 7.3E-15 103.4 18.2 241 43-315 22-280 (364)
305 PF00464 SHMT: Serine hydroxym 99.3 4.7E-10 1E-14 102.3 18.3 226 45-291 20-272 (399)
306 COG0160 GabT 4-aminobutyrate a 99.3 1.2E-09 2.6E-14 100.6 21.0 247 43-307 54-334 (447)
307 TIGR03799 NOD_PanD_pyr putativ 99.2 1.1E-09 2.4E-14 104.2 20.7 183 82-272 120-349 (522)
308 TIGR01364 serC_1 phosphoserine 99.2 4.3E-10 9.4E-15 102.3 17.0 186 63-271 3-199 (349)
309 KOG1359 Glycine C-acetyltransf 99.2 1.2E-10 2.6E-15 99.0 12.0 201 44-271 66-277 (417)
310 COG1982 LdcC Arginine/lysine/o 99.2 4.6E-10 1E-14 104.9 17.1 189 88-291 71-266 (557)
311 COG0112 GlyA Glycine/serine hy 99.2 1.9E-09 4.2E-14 95.6 19.4 232 45-305 26-270 (413)
312 KOG1360 5-aminolevulinate synt 99.2 4.8E-10 1E-14 99.1 15.5 220 58-306 181-417 (570)
313 PRK05355 3-phosphoserine/phosp 99.2 8.8E-10 1.9E-14 100.8 17.7 185 61-271 12-210 (360)
314 PRK05769 4-aminobutyrate amino 99.2 5.7E-09 1.2E-13 98.0 23.6 247 44-307 53-333 (441)
315 PRK05367 glycine dehydrogenase 99.2 1.3E-09 2.9E-14 109.9 20.4 205 45-270 499-722 (954)
316 PLN02760 4-aminobutyrate:pyruv 99.2 5E-09 1.1E-13 99.6 21.3 255 43-315 87-391 (504)
317 TIGR03372 putres_am_tran putre 99.2 5.7E-09 1.2E-13 97.7 21.3 240 44-305 74-338 (442)
318 PRK07482 hypothetical protein; 99.2 5.7E-09 1.2E-13 98.5 20.5 255 43-315 48-351 (461)
319 PLN02482 glutamate-1-semialdeh 99.1 9.6E-09 2.1E-13 96.9 21.6 220 44-286 98-336 (474)
320 PRK05965 hypothetical protein; 99.1 4.6E-09 9.9E-14 99.1 19.3 256 43-315 44-346 (459)
321 PRK07678 aminotransferase; Val 99.1 8.2E-09 1.8E-13 97.2 20.8 254 43-315 45-343 (451)
322 TIGR02617 tnaA_trp_ase tryptop 99.1 1.8E-09 3.9E-14 98.7 15.6 200 47-271 43-280 (467)
323 PRK12403 putative aminotransfe 99.1 7.9E-09 1.7E-13 97.5 20.6 255 43-315 52-350 (460)
324 PRK06105 aminotransferase; Pro 99.1 8.1E-09 1.7E-13 97.4 20.5 257 43-316 46-350 (460)
325 PRK11522 putrescine--2-oxoglut 99.1 5.5E-09 1.2E-13 98.4 19.2 216 44-270 81-315 (459)
326 PRK07046 aminotransferase; Val 99.1 2E-08 4.4E-13 94.5 21.9 216 44-286 74-307 (453)
327 TIGR00508 bioA adenosylmethion 99.1 8.2E-09 1.8E-13 96.6 18.5 255 43-316 43-338 (427)
328 PRK00615 glutamate-1-semialdeh 99.1 7.9E-09 1.7E-13 96.6 18.3 222 43-286 51-291 (433)
329 COG0001 HemL Glutamate-1-semia 99.1 2.4E-08 5.3E-13 90.6 20.5 207 43-271 51-283 (432)
330 PRK12389 glutamate-1-semialdeh 99.1 2E-08 4.4E-13 94.1 20.9 251 43-316 51-326 (428)
331 PRK06082 4-aminobutyrate amino 99.1 1.7E-08 3.8E-13 95.1 20.0 217 44-271 71-313 (459)
332 KOG2862 Alanine-glyoxylate ami 99.1 7.6E-09 1.6E-13 88.9 15.8 185 62-270 27-219 (385)
333 PRK13360 omega amino acid--pyr 99.1 4.6E-08 1E-12 91.9 21.9 220 43-271 44-300 (442)
334 PRK05630 adenosylmethionine--8 99.1 1.4E-08 3E-13 94.8 18.2 217 43-271 38-286 (422)
335 PRK05639 4-aminobutyrate amino 99.1 2.6E-08 5.5E-13 93.9 20.0 216 44-271 52-306 (457)
336 KOG1357 Serine palmitoyltransf 99.0 1.6E-09 3.5E-14 97.2 10.9 217 62-307 155-392 (519)
337 PRK12566 glycine dehydrogenase 99.0 1.6E-08 3.5E-13 100.4 18.5 174 81-269 530-722 (954)
338 PRK06943 adenosylmethionine--8 99.0 7.2E-08 1.6E-12 90.8 22.1 255 43-315 52-352 (453)
339 PRK07986 adenosylmethionine--8 99.0 2.6E-08 5.5E-13 93.1 18.8 256 43-316 41-335 (428)
340 PRK06149 hypothetical protein; 99.0 5.9E-08 1.3E-12 99.5 22.7 249 44-315 584-869 (972)
341 PRK09221 beta alanine--pyruvat 99.0 6.6E-08 1.4E-12 90.9 21.2 220 43-271 47-303 (445)
342 PRK07036 hypothetical protein; 99.0 4.3E-08 9.3E-13 92.6 19.9 255 43-315 49-352 (466)
343 PRK06173 adenosylmethionine--8 99.0 3.4E-08 7.3E-13 92.4 18.6 217 43-270 42-291 (429)
344 TIGR03811 tyr_de_CO2_Ent tyros 99.0 7.1E-08 1.5E-12 92.9 21.1 141 82-229 114-326 (608)
345 PRK06917 hypothetical protein; 99.0 8.8E-08 1.9E-12 90.1 21.4 255 43-315 29-328 (447)
346 COG4100 Cystathionine beta-lya 99.0 3.4E-08 7.3E-13 84.6 16.3 191 65-270 38-249 (416)
347 PRK07481 hypothetical protein; 99.0 1.4E-07 3E-12 88.9 22.0 228 43-286 40-305 (449)
348 PRK07480 putative aminotransfe 99.0 7.2E-08 1.6E-12 90.9 19.7 256 43-315 48-347 (456)
349 PRK08742 adenosylmethionine--8 99.0 1.1E-07 2.5E-12 89.8 21.1 256 43-314 62-366 (472)
350 PF00202 Aminotran_3: Aminotra 99.0 2.1E-08 4.5E-13 91.1 15.2 239 43-306 14-289 (339)
351 PRK07483 hypothetical protein; 99.0 9.2E-08 2E-12 89.9 20.0 255 43-315 28-328 (443)
352 PRK06916 adenosylmethionine--8 99.0 7.7E-08 1.7E-12 90.8 19.3 218 44-271 55-309 (460)
353 COG1921 SelA Selenocysteine sy 99.0 2E-07 4.3E-12 83.9 20.7 230 47-306 29-265 (395)
354 PRK06062 hypothetical protein; 99.0 1.1E-07 2.4E-12 89.6 20.0 254 43-315 51-340 (451)
355 TIGR01366 serC_3 phosphoserine 98.9 1.1E-08 2.3E-13 93.8 12.7 178 62-269 13-198 (361)
356 PF03841 SelA: L-seryl-tRNA se 98.9 2E-09 4.4E-14 95.7 7.2 227 61-307 16-256 (367)
357 PRK07030 adenosylmethionine--8 98.9 1.4E-07 3.1E-12 89.1 20.1 254 43-314 45-345 (466)
358 PRK06148 hypothetical protein; 98.9 1.3E-07 2.9E-12 97.1 20.7 250 44-315 623-909 (1013)
359 KOG1401 Acetylornithine aminot 98.9 1.2E-07 2.6E-12 84.6 16.2 254 43-317 54-334 (433)
360 PLN02452 phosphoserine transam 98.8 2E-07 4.3E-12 85.2 16.8 197 44-270 5-213 (365)
361 KOG1358 Serine palmitoyltransf 98.8 9.8E-08 2.1E-12 84.5 14.0 203 43-269 92-315 (467)
362 PRK06938 diaminobutyrate--2-ox 98.8 5.7E-07 1.2E-11 85.0 20.3 220 44-271 62-315 (464)
363 PRK06209 glutamate-1-semialdeh 98.8 2.8E-07 6.1E-12 86.4 17.0 208 43-271 46-266 (431)
364 PRK06931 diaminobutyrate--2-ox 98.8 1.4E-06 3.1E-11 82.2 21.0 220 43-270 56-308 (459)
365 PRK05367 glycine dehydrogenase 98.8 6.7E-07 1.5E-11 90.7 19.6 185 49-270 80-285 (954)
366 COG0161 BioA Adenosylmethionin 98.8 2.4E-07 5.1E-12 85.2 14.9 236 64-316 62-345 (449)
367 COG1003 GcvP Glycine cleavage 98.7 4.8E-07 1E-11 81.4 14.4 174 81-269 96-285 (496)
368 TIGR01365 serC_2 phosphoserine 98.6 1E-06 2.3E-11 80.6 14.5 177 67-270 19-199 (374)
369 PLN02974 adenosylmethionine-8- 98.6 3.8E-06 8.2E-11 83.9 19.4 233 63-311 383-711 (817)
370 COG3844 Kynureninase [Amino ac 98.6 2E-06 4.2E-11 74.8 14.6 204 44-270 29-244 (407)
371 KOG1383 Glutamate decarboxylas 98.6 3.6E-06 7.7E-11 76.5 16.4 179 87-273 116-306 (491)
372 PLN02414 glycine dehydrogenase 98.6 3.5E-06 7.7E-11 85.4 17.6 181 61-271 115-314 (993)
373 PRK12462 phosphoserine aminotr 98.6 5.2E-06 1.1E-10 75.4 17.1 195 46-270 4-211 (364)
374 KOG1404 Alanine-glyoxylate ami 98.5 2.4E-06 5.1E-11 76.0 14.0 242 43-305 48-324 (442)
375 PRK08297 L-lysine aminotransfe 98.5 1.5E-05 3.2E-10 75.1 20.0 187 44-232 44-275 (443)
376 TIGR03251 LAT_fam L-lysine 6-t 98.5 1.2E-05 2.6E-10 75.5 19.2 187 43-232 36-268 (431)
377 TIGR00699 GABAtrns_euk 4-amino 98.4 1E-05 2.2E-10 76.2 15.5 210 44-261 57-328 (464)
378 KOG1402 Ornithine aminotransfe 98.3 2E-05 4.3E-10 68.8 12.7 213 62-303 75-317 (427)
379 PF02347 GDC-P: Glycine cleava 98.2 4E-05 8.6E-10 70.7 14.8 189 48-270 68-276 (429)
380 COG3033 TnaA Tryptophanase [Am 98.2 2.5E-05 5.4E-10 68.9 12.0 137 82-226 74-229 (471)
381 KOG0629 Glutamate decarboxylas 98.2 6.5E-05 1.4E-09 67.7 14.7 197 65-270 116-335 (510)
382 TIGR00461 gcvP glycine dehydro 98.1 0.00022 4.7E-09 71.9 18.7 147 49-223 68-230 (939)
383 KOG0628 Aromatic-L-amino-acid/ 97.9 0.00087 1.9E-08 61.3 16.6 140 85-230 107-279 (511)
384 PF05889 SLA_LP_auto_ag: Solub 97.8 0.00014 3.1E-09 65.7 10.3 183 92-287 57-247 (389)
385 COG0403 GcvP Glycine cleavage 97.6 0.0078 1.7E-07 54.8 17.3 189 49-270 79-290 (450)
386 PLN02672 methionine S-methyltr 97.6 0.0038 8.2E-08 64.2 17.1 256 25-305 369-644 (1082)
387 KOG2467 Glycine/serine hydroxy 97.5 0.0018 3.9E-08 57.6 11.5 193 62-269 51-264 (477)
388 PRK12566 glycine dehydrogenase 97.1 0.038 8.2E-07 56.1 17.2 144 48-220 82-241 (954)
389 COG1932 SerC Phosphoserine ami 96.7 0.049 1.1E-06 48.8 13.1 209 45-287 4-222 (365)
390 KOG1403 Predicted alanine-glyo 96.3 0.041 8.8E-07 48.0 9.9 232 63-315 62-335 (452)
391 KOG2040 Glycine dehydrogenase 96.2 0.1 2.2E-06 50.2 12.4 168 86-268 577-760 (1001)
392 KOG3846 L-kynurenine hydrolase 95.1 0.71 1.5E-05 40.7 12.6 206 44-270 65-291 (465)
393 KOG1405 4-aminobutyrate aminot 94.4 0.35 7.7E-06 43.3 9.2 87 172-261 254-348 (484)
394 KOG3843 Predicted serine hydro 89.5 5 0.00011 34.7 9.9 136 122-260 88-230 (432)
395 KOG2790 Phosphoserine aminotra 88.3 17 0.00037 32.0 12.6 195 44-266 5-216 (370)
396 COG2102 Predicted ATPases of P 88.0 8.6 0.00019 32.4 10.2 99 112-220 3-116 (223)
397 TIGR01470 cysG_Nterm siroheme 83.7 13 0.00028 31.1 9.6 95 108-223 7-102 (205)
398 PF05368 NmrA: NmrA-like famil 83.4 12 0.00027 31.5 9.6 91 119-221 8-99 (233)
399 cd06568 GH20_SpHex_like A subg 79.2 4.9 0.00011 36.4 5.8 69 148-220 24-92 (329)
400 CHL00200 trpA tryptophan synth 79.0 23 0.0005 30.9 9.7 96 122-223 107-209 (263)
401 KOG2040 Glycine dehydrogenase 78.5 56 0.0012 32.4 12.5 77 132-221 203-281 (1001)
402 PRK10595 SOS cell division inh 78.4 33 0.00073 27.6 10.5 103 112-218 30-136 (164)
403 COG0552 FtsY Signal recognitio 77.9 14 0.0003 33.3 8.0 102 117-227 150-271 (340)
404 PLN02591 tryptophan synthase 77.3 36 0.00077 29.5 10.3 158 43-221 28-194 (250)
405 TIGR03573 WbuX N-acetyl sugar 76.9 44 0.00096 30.4 11.4 125 89-230 42-174 (343)
406 KOG1467 Translation initiation 76.4 37 0.0008 32.2 10.4 131 86-226 324-472 (556)
407 cd02742 GH20_hexosaminidase Be 76.0 6.8 0.00015 35.0 5.8 68 148-220 22-89 (303)
408 KOG1465 Translation initiation 75.3 60 0.0013 28.9 13.8 174 80-271 118-312 (353)
409 TIGR00623 sula cell division i 75.1 42 0.00092 27.1 9.7 85 129-218 55-140 (168)
410 PRK08265 short chain dehydroge 73.5 49 0.0011 28.3 10.5 66 110-180 6-71 (261)
411 cd06562 GH20_HexA_HexB-like Be 72.8 7.4 0.00016 35.5 5.2 67 148-223 24-92 (348)
412 cd06570 GH20_chitobiase-like_1 71.7 9.4 0.0002 34.3 5.5 65 148-223 24-90 (311)
413 PF13460 NAD_binding_10: NADH( 70.9 43 0.00093 26.8 9.0 89 113-217 1-90 (183)
414 COG1648 CysG Siroheme synthase 70.4 33 0.00071 28.9 8.2 92 107-220 9-101 (210)
415 KOG1201 Hydroxysteroid 17-beta 69.3 54 0.0012 29.1 9.5 98 108-211 36-144 (300)
416 PF02702 KdpD: Osmosensitive K 66.2 22 0.00047 29.7 6.1 100 117-221 16-121 (211)
417 PRK05234 mgsA methylglyoxal sy 65.3 64 0.0014 25.2 10.2 80 134-222 32-112 (142)
418 TIGR00290 MJ0570_dom MJ0570-re 64.2 87 0.0019 26.6 9.6 98 113-220 4-115 (223)
419 cd00532 MGS-like MGS-like doma 64.0 57 0.0012 24.1 10.5 95 120-223 11-106 (112)
420 KOG2865 NADH:ubiquinone oxidor 63.6 41 0.0009 29.8 7.5 86 127-218 78-170 (391)
421 COG1184 GCD2 Translation initi 62.6 1.1E+02 0.0025 27.2 11.6 103 108-221 117-226 (301)
422 TIGR00289 conserved hypothetic 62.2 98 0.0021 26.3 9.9 98 113-220 4-115 (222)
423 COG0296 GlgB 1,4-alpha-glucan 61.9 13 0.00029 36.6 4.7 43 187-232 201-243 (628)
424 cd06563 GH20_chitobiase-like T 60.1 20 0.00043 32.9 5.4 73 148-220 24-103 (357)
425 PF02662 FlpD: Methyl-viologen 59.5 59 0.0013 24.8 7.1 47 170-216 39-90 (124)
426 COG4221 Short-chain alcohol de 59.4 61 0.0013 27.9 7.7 95 111-211 6-111 (246)
427 PRK04296 thymidine kinase; Pro 59.2 62 0.0013 26.5 7.8 95 120-227 17-117 (190)
428 cd06569 GH20_Sm-chitobiase-lik 59.2 22 0.00048 33.7 5.6 76 148-223 28-119 (445)
429 PRK05678 succinyl-CoA syntheta 58.2 45 0.00098 29.6 7.1 52 172-229 78-129 (291)
430 COG0031 CysK Cysteine synthase 57.6 1.4E+02 0.003 26.6 10.0 89 108-198 59-154 (300)
431 COG0373 HemA Glutamyl-tRNA red 57.3 87 0.0019 29.3 9.0 90 118-225 185-275 (414)
432 PRK11889 flhF flagellar biosyn 56.2 1.8E+02 0.0039 27.4 12.2 94 120-226 255-363 (436)
433 PF00728 Glyco_hydro_20: Glyco 56.2 18 0.00039 32.8 4.5 70 148-223 24-95 (351)
434 COG1088 RfbB dTDP-D-glucose 4, 55.8 1.5E+02 0.0033 26.5 9.9 109 112-232 2-137 (340)
435 PRK06194 hypothetical protein; 55.2 1.4E+02 0.003 25.8 10.3 66 111-181 7-75 (287)
436 PRK10785 maltodextrin glucosid 55.1 44 0.00095 33.0 7.2 60 170-229 175-252 (598)
437 PF04748 Polysacc_deac_2: Dive 55.0 82 0.0018 26.5 7.9 120 89-220 73-206 (213)
438 COG0159 TrpA Tryptophan syntha 54.5 1.5E+02 0.0032 25.9 17.5 91 120-215 108-203 (265)
439 PF01408 GFO_IDH_MocA: Oxidore 54.5 84 0.0018 23.1 9.0 21 201-221 98-118 (120)
440 PF01902 ATP_bind_4: ATP-bindi 54.0 1.1E+02 0.0025 25.8 8.6 98 113-220 4-115 (218)
441 PRK10886 DnaA initiator-associ 53.2 1E+02 0.0022 25.6 8.1 39 176-221 103-141 (196)
442 cd01422 MGS Methylglyoxal synt 53.2 94 0.002 23.2 10.2 79 134-221 27-106 (115)
443 smart00642 Aamy Alpha-amylase 52.8 22 0.00048 28.6 4.0 28 202-229 69-96 (166)
444 PRK07063 short chain dehydroge 52.4 1.5E+02 0.0032 25.2 10.6 67 109-180 6-77 (260)
445 PF03652 UPF0081: Uncharacteri 52.4 64 0.0014 25.0 6.4 59 169-227 36-99 (135)
446 PF04392 ABC_sub_bind: ABC tra 52.4 1.3E+02 0.0029 26.4 9.3 143 64-220 13-164 (294)
447 PLN00191 enolase 52.1 71 0.0015 30.4 7.8 99 118-223 296-395 (457)
448 PRK07424 bifunctional sterol d 51.5 2E+02 0.0044 26.9 10.6 77 109-192 177-254 (406)
449 PRK07067 sorbitol dehydrogenas 51.1 1.5E+02 0.0033 25.0 10.1 66 111-181 7-72 (257)
450 TIGR00064 ftsY signal recognit 50.7 1.3E+02 0.0028 26.4 8.7 97 123-226 89-203 (272)
451 COG1105 FruK Fructose-1-phosph 50.5 1.9E+02 0.0041 26.0 10.1 58 168-228 108-171 (310)
452 COG0352 ThiE Thiamine monophos 50.5 82 0.0018 26.5 7.1 52 173-226 24-75 (211)
453 COG0074 SucD Succinyl-CoA synt 49.9 93 0.002 27.4 7.4 86 134-229 44-129 (293)
454 COG1066 Sms Predicted ATP-depe 49.8 1.6E+02 0.0035 27.7 9.2 110 107-221 89-215 (456)
455 cd04724 Tryptophan_synthase_al 49.7 1.7E+02 0.0036 25.1 9.6 96 123-223 93-194 (242)
456 TIGR01019 sucCoAalpha succinyl 49.3 81 0.0018 27.9 7.3 52 172-229 76-127 (286)
457 PF02571 CbiJ: Precorrin-6x re 49.2 1.6E+02 0.0034 25.5 8.9 101 109-213 129-248 (249)
458 COG0826 Collagenase and relate 48.9 54 0.0012 30.0 6.2 46 172-217 15-63 (347)
459 PRK11070 ssDNA exonuclease Rec 48.8 2.2E+02 0.0049 28.0 10.8 99 117-225 53-160 (575)
460 PRK13656 trans-2-enoyl-CoA red 47.9 2.2E+02 0.0048 26.5 10.0 88 86-180 17-122 (398)
461 PF10087 DUF2325: Uncharacteri 47.6 1E+02 0.0022 22.0 9.4 68 145-222 13-81 (97)
462 PRK12936 3-ketoacyl-(acyl-carr 46.7 1.7E+02 0.0037 24.3 10.4 77 111-192 7-89 (245)
463 COG1010 CobJ Precorrin-3B meth 46.7 1.1E+02 0.0025 26.1 7.3 112 109-227 71-199 (249)
464 PRK08339 short chain dehydroge 46.7 1.9E+02 0.0041 24.8 10.1 66 110-180 8-77 (263)
465 PRK13111 trpA tryptophan synth 46.6 2E+02 0.0043 25.1 9.3 94 122-221 105-205 (258)
466 COG0816 Predicted endonuclease 46.3 62 0.0013 25.3 5.4 54 171-224 40-97 (141)
467 COG1091 RfbD dTDP-4-dehydrorha 46.3 2.1E+02 0.0046 25.3 9.4 97 172-271 38-154 (281)
468 PRK05717 oxidoreductase; Valid 46.3 1.8E+02 0.004 24.6 9.6 56 109-164 9-64 (255)
469 PRK15452 putative protease; Pr 46.1 62 0.0014 30.6 6.4 82 136-223 5-98 (443)
470 PF02603 Hpr_kinase_N: HPr Ser 45.7 36 0.00077 26.0 4.0 38 175-221 73-110 (127)
471 cd03313 enolase Enolase: Enola 45.6 52 0.0011 30.8 5.8 94 120-221 264-361 (408)
472 TIGR02104 pulA_typeI pullulana 45.6 24 0.00053 34.9 3.8 35 192-229 221-255 (605)
473 PRK05872 short chain dehydroge 45.3 2.1E+02 0.0046 25.0 10.5 67 109-180 8-76 (296)
474 PF02571 CbiJ: Precorrin-6x re 45.0 1.1E+02 0.0025 26.4 7.4 94 112-220 2-97 (249)
475 PF00128 Alpha-amylase: Alpha 44.0 21 0.00045 31.3 2.9 29 202-230 51-79 (316)
476 PRK05562 precorrin-2 dehydroge 43.9 2E+02 0.0044 24.4 10.5 93 109-223 24-118 (223)
477 cd01018 ZntC Metal binding pro 43.8 2.2E+02 0.0047 24.7 12.1 74 133-221 169-245 (266)
478 PF01008 IF-2B: Initiation fac 43.7 1.7E+02 0.0037 25.5 8.6 118 91-222 92-216 (282)
479 PRK06500 short chain dehydroge 42.6 2E+02 0.0044 24.0 10.7 54 111-164 7-60 (249)
480 PF13407 Peripla_BP_4: Peripla 42.2 65 0.0014 27.2 5.6 65 147-221 20-85 (257)
481 COG2984 ABC-type uncharacteriz 42.1 2.6E+02 0.0057 25.2 10.9 145 61-224 41-196 (322)
482 PRK07890 short chain dehydroge 41.9 1.7E+02 0.0038 24.6 8.3 66 110-180 5-73 (258)
483 PRK00077 eno enolase; Provisio 41.8 96 0.0021 29.2 7.0 86 129-221 272-361 (425)
484 PRK07231 fabG 3-ketoacyl-(acyl 40.9 2.1E+02 0.0046 23.8 9.7 78 110-192 5-90 (251)
485 PRK12481 2-deoxy-D-gluconate 3 40.6 2.3E+02 0.0049 24.0 10.0 67 110-181 8-75 (251)
486 PF02142 MGS: MGS-like domain 40.0 81 0.0018 22.4 5.0 88 127-220 6-94 (95)
487 cd01424 MGS_CPS_II Methylglyox 40.0 1.5E+02 0.0032 21.7 10.3 91 119-222 11-101 (110)
488 PRK06139 short chain dehydroge 39.7 2.8E+02 0.0061 24.9 9.9 63 113-180 9-75 (330)
489 KOG1209 1-Acyl dihydroxyaceton 39.6 1E+02 0.0022 26.2 5.8 57 109-165 6-63 (289)
490 KOG2741 Dimeric dihydrodiol de 39.6 59 0.0013 29.5 4.8 79 140-229 57-135 (351)
491 TIGR02012 tigrfam_recA protein 39.4 1.1E+02 0.0024 27.6 6.6 106 120-226 70-193 (321)
492 PRK05867 short chain dehydroge 39.1 2.4E+02 0.0051 23.8 10.3 67 109-180 8-77 (253)
493 PRK03892 ribonuclease P protei 39.0 2.4E+02 0.0051 23.8 10.7 28 194-221 144-171 (216)
494 PF00106 adh_short: short chai 38.9 1.8E+02 0.004 22.4 9.0 94 113-211 3-110 (167)
495 PRK08862 short chain dehydroge 38.8 2.3E+02 0.0051 23.7 9.2 65 111-180 6-73 (227)
496 PRK09354 recA recombinase A; P 38.8 1.1E+02 0.0023 28.0 6.5 101 120-221 75-192 (349)
497 COG0300 DltE Short-chain dehyd 38.6 2.6E+02 0.0056 24.5 8.6 97 112-210 7-113 (265)
498 PF03786 UxuA: D-mannonate deh 38.5 48 0.001 30.2 4.2 49 172-220 13-62 (351)
499 PRK05876 short chain dehydroge 38.5 2.6E+02 0.0057 24.1 10.0 66 110-180 6-74 (275)
500 TIGR00160 MGSA methylglyoxal s 38.4 1.3E+02 0.0027 23.7 5.9 68 155-229 48-117 (143)
No 1
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-50 Score=346.42 Aligned_cols=301 Identities=61% Similarity=1.064 Sum_probs=286.1
Q ss_pred CCCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcC
Q 020968 9 GNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVG 88 (319)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g 88 (319)
..-|+|+.|+..++.+...||.+...++......+...+|.|++|||+.|+++++.+...+|+.++++++.+++|+|+.|
T Consensus 25 ~~~W~f~gs~~a~ka~~~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G 104 (447)
T KOG0259|consen 25 HSVWRFKGSDAAKKAASVTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVG 104 (447)
T ss_pred ccceeeccchhhhhhccccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccc
Confidence 34499999999988888999999998887776666678999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC
Q 020968 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG 168 (319)
Q Consensus 89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 168 (319)
....|+++|+|+++...-.+.+++|++|+|.++||..++.++.++|..|++|.|+|+.|...+...|+++.++++.++.+
T Consensus 105 ~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~ 184 (447)
T KOG0259|consen 105 ILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKD 184 (447)
T ss_pred cHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCccc
Confidence 99999999999988777788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeE
Q 020968 169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL 248 (319)
Q Consensus 169 ~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi 248 (319)
|.+|++.+|.++++++.++++.||+||+|.+|+.+-+++|+++|++++++||.||+|.++.|++.++.++..+...-+||
T Consensus 185 weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVi 264 (447)
T KOG0259|consen 185 WEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVI 264 (447)
T ss_pred ceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred EEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968 249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 249 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 309 (319)
.++|+||.|..||||+||++..++.+.+.+...++.++.+.+...+++++.|.|+-.+|-+
T Consensus 265 tlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~k 325 (447)
T KOG0259|consen 265 TLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEK 325 (447)
T ss_pred eecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHh
Confidence 9999999999999999999999999999998888999999988889999999999997654
No 2
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.9e-48 Score=363.18 Aligned_cols=309 Identities=66% Similarity=1.171 Sum_probs=265.6
Q ss_pred CCCCCCCC-----CCCCCCCchHH-HHhcccccHHHHHHHHHHHhhhcC-CCCeEeccCCCCCCCCCCCCcHHHHHHHHH
Q 020968 1 MENGGGAN-----GNQWGFKANEE-LKTASGITVRGVLNSLLENLNKND-TRPLIPLGHGDPSAFPSFRTASVAVDAIVH 73 (319)
Q Consensus 1 ~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~ 73 (319)
|+++++.. ..-|.|+.|.. +.......+|.++..+.+.++... +.++|+|++|+|+.++.+++++.+.+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~ 80 (430)
T PLN00145 1 MEGGGGGGGGGHATARWRFERANAALAAAGALSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAA 80 (430)
T ss_pred CCCCCCCCCCCCccccccccCchhhHHHhcccchhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 88888774 58999999985 555555678888877777776553 779999999999988889999999999999
Q ss_pred HhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhh
Q 020968 74 SVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH 153 (319)
Q Consensus 74 ~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~ 153 (319)
.+.....+.|++..|.+++|+++++++++.+|..+++++|++|+|+++||.+++.++.++||+|++++|+|+.|...+..
T Consensus 81 al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~ 160 (430)
T PLN00145 81 ALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVF 160 (430)
T ss_pred HHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHH
Confidence 88776666899988999999999999998888889999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC
Q 020968 154 SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT 233 (319)
Q Consensus 154 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 233 (319)
.|++++.+++.++++|.+|++.++++++++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++.
T Consensus 161 ~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~ 240 (430)
T PLN00145 161 SGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSK 240 (430)
T ss_pred cCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCC
Confidence 99999999987777899999999999988899999999999999999999999999999999999999999999998776
Q ss_pred CCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968 234 PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 234 ~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 309 (319)
.+.++..+....++|+++||||.|++||||+||+++++++......++++.++.+.....+++.+.|.++..++.+
T Consensus 241 ~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~ 316 (430)
T PLN00145 241 PFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIAN 316 (430)
T ss_pred CccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhc
Confidence 6666666666678999999999999999999999986554222112234455555555456789999999886543
No 3
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-48 Score=353.75 Aligned_cols=275 Identities=25% Similarity=0.459 Sum_probs=239.1
Q ss_pred ccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhh
Q 020968 24 SGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRD 103 (319)
Q Consensus 24 ~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~ 103 (319)
.++.+........+..+.....++|+|++|+|+ +++|+.+.+++.+++..+.. .|.+..|.++||+++++++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~vi~l~iG~Pd----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~ 81 (393)
T COG0436 7 LPSYTFAVLAEAKAAAELKGKEDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRR 81 (393)
T ss_pred CcchhHHHHhHHHHHHHhcCCCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHH
Confidence 344455555433232222222689999999987 79999999999999887644 6779999999999999999999
Q ss_pred CCCCCCCCc-EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC-CCCcCCHHHHHhhhc
Q 020968 104 LPYKLSPDD-VYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDAVEALAD 181 (319)
Q Consensus 104 ~g~~~~~~~-i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~ 181 (319)
+|..+++++ |++|+|+++|+..++.+++++||+|++++|.|+.|.......|.+++.+++..+ ++|.+|++.|+++++
T Consensus 82 ~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~ 161 (393)
T COG0436 82 YGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT 161 (393)
T ss_pred hCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC
Confidence 998888877 999999999999999999999999999999999999999999999999998655 489999999999999
Q ss_pred cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCC
Q 020968 182 ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVP 260 (319)
Q Consensus 182 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~ 260 (319)
++++++++++||||||.+++.+++++|+++|++||++||.||+|.++.|++..++++..+.+ .+++|.+.||||+|+++
T Consensus 162 ~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mt 241 (393)
T COG0436 162 PKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMT 241 (393)
T ss_pred ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccccc
Confidence 99999999999999999999999999999999999999999999999999876666666655 47899999999999999
Q ss_pred cceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhcc
Q 020968 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKR 310 (319)
Q Consensus 261 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~ 310 (319)
|||+||+++++ +++++.+.+.++ ...+++.+.|.++..++...
T Consensus 242 GwRvG~~v~~~-------~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~ 285 (393)
T COG0436 242 GWRIGWVVGPP-------EELIAALRKLKSYLTSCAPTPAQYAAIAALNGP 285 (393)
T ss_pred ccceeEeecCh-------HHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCc
Confidence 99999999974 258888886666 46689999999999966544
No 4
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.6e-47 Score=359.48 Aligned_cols=297 Identities=56% Similarity=1.010 Sum_probs=258.0
Q ss_pred CCCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcC
Q 020968 9 GNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVG 88 (319)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g 88 (319)
...|.|+.|..++.....+||.+...+.+.+.+..+.++|+|++|+|+.++.+.+++.+.+++.+.+..+....|++..|
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G 109 (462)
T PLN02187 30 SSVWRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAG 109 (462)
T ss_pred ccccccCcchhhhhhhhchHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 34599999999988887899999988888777777889999999999987778889999999999887666668999999
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC
Q 020968 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG 168 (319)
Q Consensus 89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 168 (319)
.++||+++|+++++.+|..+++++|++|+|++++|..++.+++++||.|++++|+|+.|...++..|++++.++..++++
T Consensus 110 ~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~ 189 (462)
T PLN02187 110 ILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKE 189 (462)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccC
Confidence 99999999999998888889999999999999999999999999999999999999999999999999999999876677
Q ss_pred CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeE
Q 020968 169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVL 248 (319)
Q Consensus 169 ~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi 248 (319)
|++|+++++++++++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++.++.++..+....++|
T Consensus 190 ~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi 269 (462)
T PLN02187 190 WEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVL 269 (462)
T ss_pred CccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEE
Confidence 99999999999888889999999999999999999999999999999999999999999998775555665565555799
Q ss_pred EEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh---cCCcchHHHHHHHHHHh
Q 020968 249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI---SSDPATFIQFLKSSRKL 308 (319)
Q Consensus 249 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l~ 308 (319)
+++||||.|++||+|+||++++++.... ++++.+...+.. ..+++.+.|.+++.++.
T Consensus 270 ~l~SfSK~f~~pGlRiG~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~ 329 (462)
T PLN02187 270 TLAGISKGWVVPGWKIGWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAALPAILE 329 (462)
T ss_pred EEecchhhcCCccceeEEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHHHHHHh
Confidence 9999999999999999999986543110 123455554442 23458999999998654
No 5
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=6.4e-45 Score=338.08 Aligned_cols=281 Identities=67% Similarity=1.120 Sum_probs=237.3
Q ss_pred HHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCC
Q 020968 28 VRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK 107 (319)
Q Consensus 28 i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~ 107 (319)
|+.....+++.+.+..++++|+|+.|+|+.+..+++++.+.+++.+.+......+|++..|.++||+++++++.+.+|..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 94 (409)
T PLN00143 15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ 94 (409)
T ss_pred HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 55555556666667789999999999998666689999999999998877656689988999999999999999888888
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (319)
Q Consensus 108 ~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 187 (319)
+++++|++|+|+++++..++++++++||.|+++.|+|..|...++..|.+++.++..++++|.+|+++++++++++++++
T Consensus 95 ~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 174 (409)
T PLN00143 95 LSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAM 174 (409)
T ss_pred CCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEE
Confidence 99999999999999999999999999999999999999999999999999999998666778999999999888888999
Q ss_pred EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (319)
Q Consensus 188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i 267 (319)
++++||||||.+++.+++++|+++|++++++||+||+|.++.+++....++..+...+++|+++||||.|++||+|+||+
T Consensus 175 ~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~ 254 (409)
T PLN00143 175 VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWL 254 (409)
T ss_pred EEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEE
Confidence 99999999999999999999999999999999999999999987655455555666678999999999999999999999
Q ss_pred EeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968 268 VTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 308 (319)
+++++.......+.++.++........++.+.|.+++.++.
T Consensus 255 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~ 295 (409)
T PLN00143 255 VTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILE 295 (409)
T ss_pred EeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHh
Confidence 98654311100122344444443333457899999988554
No 6
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=8.5e-45 Score=337.41 Aligned_cols=281 Identities=67% Similarity=1.133 Sum_probs=243.6
Q ss_pred HHHHHHHHHHHh-hhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCC
Q 020968 28 VRGVLNSLLENL-NKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106 (319)
Q Consensus 28 i~~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~ 106 (319)
|+.++..+++.+ ++.++.++|+|+.|+|+..+.+++++.+.+++.+.+.......|++..|.+++|+++++++++.+|.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~ 92 (409)
T PLN02656 13 IKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPY 92 (409)
T ss_pred hhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 777777666665 4457789999999999866668899999999999887766678999899999999999999988888
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceE
Q 020968 107 KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186 (319)
Q Consensus 107 ~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 186 (319)
.+++++|++|+|+++|+..++.+++++||+|++++|+|+.+...++..|++++.+++.++++|.+|++.+++.+++++++
T Consensus 93 ~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (409)
T PLN02656 93 KLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVA 172 (409)
T ss_pred CCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceE
Confidence 89999999999999999999999999999999999999999888899999999999876667899999999998888899
Q ss_pred EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (319)
Q Consensus 187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~ 266 (319)
+++++|+||||.+++.+++++|+++|++++++||+|++|.++.+++..+.++..+....++|+++||||.|++||+|+||
T Consensus 173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~ 252 (409)
T PLN02656 173 LVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGW 252 (409)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEE
Confidence 99999999999999999999999999999999999999999998876555655565667899999999999999999999
Q ss_pred EEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968 267 LVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 308 (319)
++++++.....+++++++++.......+++.+.|.+++.++.
T Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~ 294 (409)
T PLN02656 253 FVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILE 294 (409)
T ss_pred EEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHh
Confidence 999754322222458888877666545678999999998554
No 7
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2.1e-43 Score=336.70 Aligned_cols=290 Identities=23% Similarity=0.428 Sum_probs=240.9
Q ss_pred CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHH
Q 020968 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91 (319)
Q Consensus 12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~ 91 (319)
|-++.|++++.+..+.++.+.....+ + +..+.++|+|+.|+|+.+ .+++|+.+.+++.+.+.. ..+|++..|..+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~ 189 (517)
T PRK13355 115 RTFKKSHKLDNVLYDVRGPVVDEANR-M-EAAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLFS 189 (517)
T ss_pred cCCChhHHhhccCccHHHHHHHHHHH-H-HHcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChHH
Confidence 66778999999998877666654433 3 345789999999998642 267799999999887754 347999999999
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968 92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171 (319)
Q Consensus 92 lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (319)
||+++++++.+..+..+++++|++|+|+++++.+++.+++++||+|+++.|+|+.|...++..|.+++.++.+++++|.+
T Consensus 190 lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~ 269 (517)
T PRK13355 190 ARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYP 269 (517)
T ss_pred HHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCC
Confidence 99999999987666568999999999999999999999999999999999999999999999999999999877778999
Q ss_pred CHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (319)
Q Consensus 172 d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~ 251 (319)
|++++++++.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+.++..+++++
T Consensus 270 d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~ 349 (517)
T PRK13355 270 DIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFS 349 (517)
T ss_pred CHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEe
Confidence 99999999988899999999999999999999999999999999999999999999998876666666665544578889
Q ss_pred cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 308 (319)
||||+|+++|+|+||++++.+.... ..+++.+........+++.++|.++..++.
T Consensus 350 S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~ 404 (517)
T PRK13355 350 GLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIVQTALG 404 (517)
T ss_pred cchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHHHHHhc
Confidence 9999999999999999975422000 123444444444334678899999888653
No 8
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=7.1e-43 Score=324.48 Aligned_cols=280 Identities=25% Similarity=0.442 Sum_probs=240.0
Q ss_pred CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHH
Q 020968 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91 (319)
Q Consensus 12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~ 91 (319)
-.++++.+++.+..+.++.+..... ..++|+|+.|.|+ +++++.+.+++.+.+... ..+|++..|.++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~ 95 (413)
T PLN00175 28 QPLQVAKRLEKFKTTIFTQMSSLAI-------KHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPE 95 (413)
T ss_pred cccchhHHhhcCCCCHHHHHHHHhh-------cCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHH
Confidence 3466788888888888877665432 4589999999987 577889999999888763 458999999999
Q ss_pred HHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCc
Q 020968 92 ARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE 170 (319)
Q Consensus 92 lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 170 (319)
||+++++++++.+|..++++ +|++|+|+++|+..++.+++++||+|++++|+|..|...++..|.+++.++++++ ++.
T Consensus 96 Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~ 174 (413)
T PLN00175 96 LNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFA 174 (413)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCC
Confidence 99999999998888888887 7999999999999999999999999999999999999999999999999998654 378
Q ss_pred CCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEE
Q 020968 171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLT 249 (319)
Q Consensus 171 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~ 249 (319)
+|++.+++.+.++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++. +.++.++.. .+++|+
T Consensus 175 ~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~ 253 (413)
T PLN00175 175 VPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVT 253 (413)
T ss_pred CCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEE
Confidence 999999999988899999999999999999999999999999999999999999999988653 335545443 578999
Q ss_pred EecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhccccc
Q 020968 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKRNSF 313 (319)
Q Consensus 250 ~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~ 313 (319)
++||||.|++||+|+||++++. ++++.+..... ...+++.+.|.+++.++...+.|
T Consensus 254 i~SfSK~~~~~G~RiG~~v~~~--------~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~ 310 (413)
T PLN00175 254 MNSLGKTFSLTGWKIGWAIAPP--------HLTWGVRQAHSFLTFATATPMQWAAVAALRAPESY 310 (413)
T ss_pred EecchhhccCcchheeeeEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999864 57888877765 35678999999999855443333
No 9
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=5.4e-43 Score=323.61 Aligned_cols=287 Identities=22% Similarity=0.343 Sum_probs=237.8
Q ss_pred CCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHH
Q 020968 14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPAR 93 (319)
Q Consensus 14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr 93 (319)
++.|++++...++.++.+.+.+.+. ...++++++|+.|+|+ +++++.+.+++.+.+.......|++..|.++||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr 76 (389)
T PRK08068 3 FEPSELLKQLPKQFFASLVAKVNKK--VAEGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPFLK 76 (389)
T ss_pred CchhhHhhhcCccHHHHHHHHHHHH--HhcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHH
Confidence 4567777777777777665543222 2245689999999987 566788899998887665556899889999999
Q ss_pred HHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC
Q 020968 94 RAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172 (319)
Q Consensus 94 ~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 172 (319)
+++++++.+.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++.+++.++.+|
T Consensus 77 ~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d 156 (389)
T PRK08068 77 EAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPD 156 (389)
T ss_pred HHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCC
Confidence 999999988888888888 8999999999999999999999999999999999999999999999999998766678899
Q ss_pred HHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc-cCCCCCeEEEe
Q 020968 173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV-FGSIVPVLTLG 251 (319)
Q Consensus 173 ~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~vi~~~ 251 (319)
++++++.+.++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++..+.++.. ....+++++++
T Consensus 157 ~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~ 236 (389)
T PRK08068 157 YTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELY 236 (389)
T ss_pred HHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEe
Confidence 99999988778899999999999999999999999999999999999999999998887643334322 23345789999
Q ss_pred cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
||||.|++||+|+||++++. +++++++..... ..+.+++.|.+++.++.+++.+.
T Consensus 237 S~SK~~g~~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 292 (389)
T PRK08068 237 TLSKTFNMAGWRVAFAVGNE--------SVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCV 292 (389)
T ss_pred cchhccCCccceeEeEecCH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHH
Confidence 99999999999999999743 588888877654 34556678888887666544443
No 10
>PLN02368 alanine transaminase
Probab=100.00 E-value=1.9e-43 Score=326.08 Aligned_cols=286 Identities=23% Similarity=0.386 Sum_probs=231.5
Q ss_pred CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCC-------CC-------------------CCCCcHHHH
Q 020968 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSA-------FP-------------------SFRTASVAV 68 (319)
Q Consensus 15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-------~~-------------------~~~~~~~~~ 68 (319)
.+|+++..+..+.++.+.....+ + +..+.++|+|++|+|+. ++ .+.+++.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~-~-~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~ 87 (407)
T PLN02368 10 SLNENVKKCQYAVRGELYLRASE-L-QKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIA 87 (407)
T ss_pred hcCHHHHhhhhhcCCHHHHHHHH-H-HHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHH
Confidence 45788888888877776554433 2 23467999999999861 10 012566666
Q ss_pred HHHHHHh-hcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCcc
Q 020968 69 DAIVHSV-RSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPRPGFPY 146 (319)
Q Consensus 69 ~a~~~~~-~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-~~gd~Vl~~~p~~~~ 146 (319)
+++.... .......|++..|.++||+++++++++.+|..+++++|++|+|+++++..++++++ ++||.|++++|+|+.
T Consensus 88 ~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~ 167 (407)
T PLN02368 88 RAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPL 167 (407)
T ss_pred HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCcc
Confidence 6655422 22335689999999999999999999888988999999999999999999999987 799999999999999
Q ss_pred hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 147 YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 147 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
|...++..|.+++.++++.+++|++|++.+++.+++ +++++++++||||||.+++.+++++|+++|+++|++||
T Consensus 168 y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II 247 (407)
T PLN02368 168 YSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLL 247 (407)
T ss_pred HHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 999999999999999988777899999999998864 57889999999999999999999999999999999999
Q ss_pred EeCCCCCccCCCC-CCCCCccc----C----CCCCeEEEecCcccc-CCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968 221 ADEVYDHLAFGNT-PFVPMGVF----G----SIVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 221 ~D~a~~~~~~~~~-~~~~~~~~----~----~~~~vi~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 290 (319)
+||+|.++.|++. ++.++..+ . ..+++|+++||||+| ++||||+||+++.+- .+++++++.....
T Consensus 248 ~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~-----~~~li~~~~~~~~ 322 (407)
T PLN02368 248 GDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI-----PPKTVEEIYKVAS 322 (407)
T ss_pred EEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCC-----CHHHHHHHHHHhc
Confidence 9999999998764 33443322 1 245899999999998 799999999985210 1358888877654
Q ss_pred hcCCcchHHHHHHHHHH
Q 020968 291 ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 291 ~~~~~~~~~q~~~~~~l 307 (319)
...+++.++|.++..++
T Consensus 323 ~~~~~~~~~Q~aa~~~l 339 (407)
T PLN02368 323 IALSPNVSGQIFMGLMV 339 (407)
T ss_pred ccCCCCcHHHHHHHHHh
Confidence 44568899999998855
No 11
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-42 Score=321.93 Aligned_cols=284 Identities=20% Similarity=0.301 Sum_probs=236.6
Q ss_pred chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (319)
Q Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 95 (319)
++++.+...++.++.+.....+ . +..+.++++|+.|+|+ +++++.+.+++.+.+.......|+ ..|.++||++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~a 77 (399)
T PRK07681 5 LATRMKAFQSSIFSELGAYKKE-K-IAAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEA 77 (399)
T ss_pred HhHHHhhcCccHHHHHHHHHHH-h-hhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHH
Confidence 4566666666666666554322 1 2236789999999987 577889999998877553333555 4799999999
Q ss_pred HHHHHhhhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968 96 IADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 96 ia~~~~~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (319)
+++++++.+|..+++ ++|++|+|+++++..++.+++++||+|++++|+|+.|...++..|.+++.++.+++++|.+|++
T Consensus 78 ia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 157 (399)
T PRK07681 78 VTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLE 157 (399)
T ss_pred HHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHH
Confidence 999999888988998 8999999999999999999999999999999999999999999999999999977777889999
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecC
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI 253 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~ 253 (319)
++++.+.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++..+.++..+.. .+++|+++||
T Consensus 158 ~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 237 (399)
T PRK07681 158 LIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSL 237 (399)
T ss_pred HHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeec
Confidence 999888778899999999999999999999999999999999999999999999987665555555443 3679999999
Q ss_pred ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhcccccc
Q 020968 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
||.|++||+|+||++++. ++++++..... ...+++.+.|.++..++.....|.
T Consensus 238 SK~~~~~GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 291 (399)
T PRK07681 238 SKSYSLAGSRIGYMIGNE--------EIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFC 291 (399)
T ss_pred ccccCCccceeEEEecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHH
Confidence 999999999999999753 58888887765 345788999999988665443443
No 12
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.3e-42 Score=320.59 Aligned_cols=286 Identities=23% Similarity=0.372 Sum_probs=235.6
Q ss_pred chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (319)
Q Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 95 (319)
+++++.....+.+..+.+.+. .+ +..++++++|+.|+|+ +++++.+.+++.+.+......+|++..|.++||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ 75 (383)
T TIGR03540 2 LADRIENLPPYLFAEIDKKKA-EK-KAEGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQA 75 (383)
T ss_pred cchhhccCChhHHHHHHHHHH-HH-HhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Confidence 355655555554444443332 22 2236799999999987 57788999999987765555689998899999999
Q ss_pred HHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968 96 IADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 96 ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (319)
+++++++.+|..++++ +|++|+|+++++..+++.++++||+|+++.|+|..+...++..|.+++.++.++++++.+|++
T Consensus 76 ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~ 155 (383)
T TIGR03540 76 VADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFD 155 (383)
T ss_pred HHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHH
Confidence 9999998888877776 699999999999999999999999999999999999999999999999999876667889999
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecC
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI 253 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~ 253 (319)
++++.+.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++..+.++..+.. .+++|+++||
T Consensus 156 ~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~Sf 235 (383)
T TIGR03540 156 AIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSL 235 (383)
T ss_pred HHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEec
Confidence 999888888999999999999999999999999999999999999999999999887655566655543 3578999999
Q ss_pred ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhccccccc
Q 020968 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFLK 315 (319)
Q Consensus 254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~ 315 (319)
||.|++||+|+||++++. ++++++...... ..+++.+.|.++..++.+..+|.+
T Consensus 236 SK~~g~~GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 290 (383)
T TIGR03540 236 SKTYNMTGWRIGMAVGNA--------DLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVK 290 (383)
T ss_pred ccccCCccceeeEEeCCH--------HHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHH
Confidence 999999999999999753 588888776653 456678899998886544345443
No 13
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=8.5e-43 Score=322.27 Aligned_cols=283 Identities=14% Similarity=0.224 Sum_probs=229.0
Q ss_pred hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (319)
Q Consensus 17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 96 (319)
+.+++.++...+..+.. ..+.. +..+.++|+|+.|+++ +++++.+.+++.+.+......+|++..|.++||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~ai 77 (388)
T PRK07366 4 AQRLQPLQSNVFADMDR-AKAQA-RAAGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAA 77 (388)
T ss_pred hhhhhcCCccHHHHHHH-HHHHH-HhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHH
Confidence 55666665554444433 22222 2346789999999976 677899999999887655456799889999999999
Q ss_pred HHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968 97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (319)
Q Consensus 97 a~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (319)
++++.+.+|..++++ +|++|+|+++++.+++++++++||+|++++|+|..|...++..|++++.++.+.++++.+|+++
T Consensus 78 a~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 157 (388)
T PRK07366 78 AQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFAD 157 (388)
T ss_pred HHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHH
Confidence 999998889889998 6999999999999999999999999999999999999999999999999999776778899999
Q ss_pred HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCC-CCCCcccCCC-CCeEEEecC
Q 020968 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP-FVPMGVFGSI-VPVLTLGSI 253 (319)
Q Consensus 176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~~-~~vi~~~s~ 253 (319)
+++.+.++++++++++||||||.++|.+++++|+++|+++|++||+||+|.++.+++.. .+++..+... +++|+++||
T Consensus 158 l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf 237 (388)
T PRK07366 158 IPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTL 237 (388)
T ss_pred HHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeec
Confidence 98877777899999999999999999999999999999999999999999999987643 4445555433 468999999
Q ss_pred ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCc-chHHHHHHHHHHhcccccc
Q 020968 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDP-ATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~q~~~~~~l~~~~~~~ 314 (319)
||+|++||+|+||++++. +++++++..... ..+. +.+.|.+++. +.++++|.
T Consensus 238 SK~~g~~GlRiG~~v~~~--------~li~~l~~~~~~~~~~~~~~~~~~a~~~-l~~~~~~l 291 (388)
T PRK07366 238 SKSYNMGGFRIGFAIGNA--------QLIQALRQVKAVVDFNQYRGILNGAIAA-LTGPQATV 291 (388)
T ss_pred ccccCCcchhheehcCCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHH-HhCcHHHH
Confidence 999999999999999753 588888877664 2223 3344455444 54433343
No 14
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-43 Score=308.50 Aligned_cols=247 Identities=28% Similarity=0.464 Sum_probs=223.0
Q ss_pred ccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHH
Q 020968 50 LGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILT 128 (319)
Q Consensus 50 l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~ 128 (319)
|+.|.|+ +++|+-+.+++++.+.....++|.+..|+++|++++++.+...+|...+++ +|++|.|+.++|..++.
T Consensus 36 LgqGfp~----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFPD----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCCC----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence 9999987 899999999999999887778999999999999999999999787776665 69999999999999999
Q ss_pred HhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc------CCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 129 VLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL------PAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 129 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
+++++||+|++.+|.|+.|....+..|...+.++.. ..++|.+|.++++.++.+++++|++++||||||.++|+
T Consensus 112 ~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR 191 (420)
T KOG0257|consen 112 GLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR 191 (420)
T ss_pred HHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCH
Confidence 999999999999999999999999999999999987 45679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 281 (319)
++|++|+++|++||+++|.||+|..+.+++..+..+.++ +..+++|.++|++|+|++.|||+||++++. .+
T Consensus 192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~--------~L 263 (420)
T KOG0257|consen 192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK--------HL 263 (420)
T ss_pred HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH--------Hh
Confidence 999999999999999999999999999999766665555 556799999999999999999999999943 47
Q ss_pred HHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968 282 VDSIKSFLN-ISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 282 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 308 (319)
...++..++ .....+++.|.|.+.++-
T Consensus 264 ~~~~~~vh~~~~~~~~Tp~q~A~a~a~~ 291 (420)
T KOG0257|consen 264 YSALFPVHQNFVFTCPTPIQEASAAAFA 291 (420)
T ss_pred hhhHHHHhhccccccCcHHHHHHHHHHh
Confidence 777776665 456778899999888653
No 15
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=2.8e-42 Score=320.12 Aligned_cols=292 Identities=40% Similarity=0.758 Sum_probs=239.3
Q ss_pred CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHH
Q 020968 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91 (319)
Q Consensus 12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~ 91 (319)
|+.+.|.+-+... .+++.+.....+.- ..+.++++|+.|+|+....+++++.+.+++.+.+.......|++..|..+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~ 77 (401)
T TIGR01264 1 WSVKPSDHSKNTV-NPIRAIVDNMKVKP--NPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALS 77 (401)
T ss_pred CCcChHHHHhhhh-hHHHHHHHHHHhhh--hcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHH
Confidence 8888887766543 44777665443322 23468899999998643347889999999998877655567988899999
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968 92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171 (319)
Q Consensus 92 lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (319)
||+++++++.+ .+..+++++|++|+|+++++.+++.+++++||+|+++.|+|..|...++..|++++.++++.++++++
T Consensus 78 lr~aia~~~~~-~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~ 156 (401)
T TIGR01264 78 AREAIASYYHN-PDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEI 156 (401)
T ss_pred HHHHHHHHHhh-cCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCC
Confidence 99999999987 45568899999999999999999999999999999999999999999999999999998876667899
Q ss_pred CHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (319)
Q Consensus 172 d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~ 251 (319)
|++.+++.++++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++....++..+....++|+++
T Consensus 157 d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~ 236 (401)
T TIGR01264 157 DLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCG 236 (401)
T ss_pred CHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEc
Confidence 99999998887889999999999999999999999999999999999999999999998775555666665555699999
Q ss_pred cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 309 (319)
||||.|++||+|+||++++++.... .++++.++.......+++.+.|.+++.++.+
T Consensus 237 SfSK~~~~~GlRiG~iv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~ 292 (401)
T TIGR01264 237 GLAKRWLVPGWRLGWIIIHDRRGIL--RDIRDGLVKLSQRILGPCTIVQGALPSILLR 292 (401)
T ss_pred cCcccCCCccceEEEEEecCcchhH--HHHHHHHHHHhhccCCCCcHHHHHHHHHHHh
Confidence 9999999999999999987532100 1244445444433346788999999885543
No 16
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=4.7e-42 Score=318.63 Aligned_cols=293 Identities=54% Similarity=0.976 Sum_probs=245.6
Q ss_pred CCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHH
Q 020968 12 WGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILP 91 (319)
Q Consensus 12 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~ 91 (319)
|.|+-|.+.+.. ...|+.+.+.+.+.. ..+.++++|+.|+|+..+.+++++.+.+++.+.+.......|++..|..+
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~ 77 (403)
T TIGR01265 1 WNFKGSDHAKKT-VNPIRAIVDNLKVKP--NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALA 77 (403)
T ss_pred CCCchHHHHHHH-HHHHHHHHHHHHHHH--hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHH
Confidence 778888777653 357788777665432 23679999999999766678899999999998887655568988899999
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC
Q 020968 92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV 171 (319)
Q Consensus 92 lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (319)
+|++++++++...+..+++++|++|+|+++|+.+++++++++||+|++++|+|..+...++..|++++.++..+.+++.+
T Consensus 78 lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 157 (403)
T TIGR01265 78 AREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEI 157 (403)
T ss_pred HHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCcc
Confidence 99999999988778888899999999999999999999999999999999999999999999999999998866667889
Q ss_pred CHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (319)
Q Consensus 172 d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~ 251 (319)
|++.+++.+.++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+++.+++....++..+....++|+++
T Consensus 158 d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~ 237 (403)
T TIGR01265 158 DLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLG 237 (403)
T ss_pred CHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEe
Confidence 99999999888889999999999999999999999999999999999999999999998775555666666656799999
Q ss_pred cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 308 (319)
||||.|++||+|+||++++++...+ ..++++.++........++.+.|.+++.++.
T Consensus 238 S~SK~~~~pGlRiG~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 293 (403)
T TIGR01265 238 GISKRWVVPGWRLGWIIIHDPHGIF-RDTVLQGLKNLLQRILGPATIVQGALPDILE 293 (403)
T ss_pred ecccccCCCcceEEEEEEeCchhhh-HHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Confidence 9999999999999999986542111 0124444555544345678999999988654
No 17
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=4.6e-42 Score=319.50 Aligned_cols=287 Identities=33% Similarity=0.602 Sum_probs=236.2
Q ss_pred hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (319)
Q Consensus 17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 96 (319)
|.+..+ ...+++.+...+.+ ...++++|+|+.|+|+..+.+.+++.+.+++.+.+.......|++..|.++||+++
T Consensus 9 ~~~~~~-~~~~~~~~~~~~~~---~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~ai 84 (412)
T PTZ00433 9 SKHAGR-VFNPLRTVTDNAKP---SPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAV 84 (412)
T ss_pred cHHHHh-hhccHHHHHHhhcc---CCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHH
Confidence 334444 33455555544432 23578999999999874344678899999999887765556899888999999999
Q ss_pred HHHHhhhC------CCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCc
Q 020968 97 ADYLNRDL------PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE 170 (319)
Q Consensus 97 a~~~~~~~------g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 170 (319)
++++++.+ |..+++++|++|+|+++++.+++.+++++||+|+++.|+|..+...++..|++++.++.+++++|+
T Consensus 85 a~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~ 164 (412)
T PTZ00433 85 ATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWE 164 (412)
T ss_pred HHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCc
Confidence 99998643 466889999999999999999999999999999999999999999999999999999987666789
Q ss_pred CCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968 171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (319)
Q Consensus 171 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~ 250 (319)
+|++++++.+.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++....++..+....++|++
T Consensus 165 ~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~ 244 (412)
T PTZ00433 165 ADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVIL 244 (412)
T ss_pred CCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEE
Confidence 99999999888888999999999999999999999999999999999999999999999876554555556544568999
Q ss_pred ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 309 (319)
+||||.|++||+|+||++++++... .+++++.++.......+++++.|.+++.++.+
T Consensus 245 ~SfSK~~~~pGlRlG~~i~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~ 301 (412)
T PTZ00433 245 GGTAKNLVVPGWRLGWLLLVDPHGN--GGDFLDGMKRLGMLVCGPCSVVQAALGEALLN 301 (412)
T ss_pred ccchhhcCCCCeeEEEEEEeCCccc--HHHHHHHHHHHhhccCCCChHHHHHHHHHHhc
Confidence 9999999999999999998443211 12466777665554457899999999886654
No 18
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=2.1e-42 Score=323.25 Aligned_cols=263 Identities=25% Similarity=0.370 Sum_probs=215.1
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+.++++|+.|+|+.+ .+++|+.+.+++.+.+......+|++..|.++||+++++++++.+|.++++++|++|+|++++
T Consensus 30 ~g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a 108 (433)
T PRK06855 30 LGVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA 108 (433)
T ss_pred ccccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence 4678999999998532 378999999999988765555689999999999999999999988999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHH-HhhCCCeEEEEeccCCCCCcCCHHHHHhhhc--cCceEEEEcCCCCccccc
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEAR-ATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIINPGNPCGNV 199 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~ 199 (319)
+..++. ++++||.|++++|+|+.|... ....|.+++.++.+++++|.+|++++++++. ++++++++++||||||.+
T Consensus 109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~ 187 (433)
T PRK06855 109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAV 187 (433)
T ss_pred HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcC
Confidence 999985 788999999999999987654 3456888888888766788999999999886 356889999999999999
Q ss_pred cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccch
Q 020968 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (319)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 279 (319)
+|.+++++|+++|+++|++||+||+|.++.|++..++++..+.++.++|+++||||.|++||+|+||+++++......-.
T Consensus 188 ~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~ 267 (433)
T PRK06855 188 YPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFK 267 (433)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHH
Confidence 99999999999999999999999999999987765566666544456899999999999999999999986421100001
Q ss_pred HHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968 280 GIVDSIKSFLNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l 307 (319)
.+++++........+++.+.|.+++.++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~Q~a~~~~l 295 (433)
T PRK06855 268 KYINSILNAKMIEVCSTTLPQMAIPRIM 295 (433)
T ss_pred HHHHHHHHhhccccCCChHHHHHHHHhh
Confidence 2333333333233457889999999844
No 19
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-42 Score=316.02 Aligned_cols=285 Identities=23% Similarity=0.362 Sum_probs=235.5
Q ss_pred chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (319)
Q Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 95 (319)
+++++....++....+.... +.+. ..++++++|+.|+|+ +++++.+.+++.+.+.......|++..|.++||++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~a 77 (385)
T PRK09276 4 LADRIKNLPPYLFAEIDKKK-AEKI-ARGVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKA 77 (385)
T ss_pred hhhHhhhCCccHHHHHHHHH-HHHH-hcCCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHH
Confidence 45666666666555544322 2221 236779999999987 57788999999988765545689998899999999
Q ss_pred HHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968 96 IADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 96 ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (319)
+++++++.+|..++++ +|++|+|+++++..++..++++||+|++++|+|..|...++..|.+++.++.+.+.++.+|++
T Consensus 78 ia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~ 157 (385)
T PRK09276 78 VADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLD 157 (385)
T ss_pred HHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHH
Confidence 9999998888888887 599999999999999999999999999999999999999999999999999876667889999
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecC
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI 253 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~ 253 (319)
++++.+.++++++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++....++..+.. .+++|+++||
T Consensus 158 ~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 237 (385)
T PRK09276 158 AIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSL 237 (385)
T ss_pred HHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecc
Confidence 999888878899999999999999999999999999999999999999999999887655556555543 3578999999
Q ss_pred ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
||.|++||+|+||++++. ++++++...+.. ..+++.+.|.++..++.+.+.|.
T Consensus 238 SK~~g~~GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 291 (385)
T PRK09276 238 SKTYNMTGWRIGFAVGNA--------DLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVV 291 (385)
T ss_pred hhhcCCcchhheeeeCCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHH
Confidence 999999999999999753 578888776653 44567788988888654434443
No 20
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=5.1e-42 Score=317.86 Aligned_cols=275 Identities=23% Similarity=0.364 Sum_probs=230.2
Q ss_pred HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHH
Q 020968 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD 98 (319)
Q Consensus 19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 98 (319)
++..++++.++.+...+. .+.+..+.++|+|+.|+|+ +++++.+.+++.+.+. ....|++..|.++||+++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~ 76 (396)
T PRK09147 4 RLDRLQPYPFEKLRALFA-GVTPPADLPPISLSIGEPK----HPTPAFIKDALAANLD--GLASYPTTAGLPALREAIAA 76 (396)
T ss_pred hhhcCCcchHHHHHHHHH-hhhhccCCCeEecCCCCCC----CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHHHHHHH
Confidence 456667777777665443 3334457899999999987 6778999999988764 24689998899999999999
Q ss_pred HHhhhCCCC-CCCC-cEEEeCCHHHHHHHHHHHhcCC---CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968 99 YLNRDLPYK-LSPD-DVYLTLGCTQAIEVILTVLARP---GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (319)
Q Consensus 99 ~~~~~~g~~-~~~~-~i~~~~G~t~ai~~~~~~l~~~---gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (319)
++.+.+|.. ++++ +|++|+|+++++..++++++++ ||.|+++.|+|..|...++..|.+++.++++++++|.+|+
T Consensus 77 ~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~ 156 (396)
T PRK09147 77 WLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDF 156 (396)
T ss_pred HHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCH
Confidence 999888887 8885 8999999999999999999999 8999999999999999999999999999997777889999
Q ss_pred HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC-CCCC-Ccc---cC--CCCC
Q 020968 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVP-MGV---FG--SIVP 246 (319)
Q Consensus 174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~-~~~---~~--~~~~ 246 (319)
+.+++.+.++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++. ++.+ +.. .. ..++
T Consensus 157 ~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (396)
T PRK09147 157 DAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKR 236 (396)
T ss_pred HHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCcccccc
Confidence 999888777889999999999999999999999999999999999999999999988663 2211 111 11 2468
Q ss_pred eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968 247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL 308 (319)
Q Consensus 247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~ 308 (319)
+|+++||||.|++||+|+||+++++ ++++++...... ..+++++.|.++...+.
T Consensus 237 vi~~~S~SK~~~~~GlRiG~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~ 291 (396)
T PRK09147 237 LVVFHSLSKRSNVPGLRSGFVAGDA--------ALLKKFLLYRTYHGCAMPPAVQAASIAAWN 291 (396)
T ss_pred EEEEeccccccCCccceeeeecCCH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHhc
Confidence 9999999999999999999999863 577888776653 45678899988776553
No 21
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.9e-42 Score=316.99 Aligned_cols=276 Identities=22% Similarity=0.296 Sum_probs=230.2
Q ss_pred cccccHHHHHHHHHHHhhhcC-CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHh
Q 020968 23 ASGITVRGVLNSLLENLNKND-TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLN 101 (319)
Q Consensus 23 ~~~~~i~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 101 (319)
.+..++|+-..-+.+.++... ..++++|+.|+|+. +++++.+.+++.+.+.......|++..|.++||+++++++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~---~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~ 92 (405)
T PRK06207 16 APGQEVRQSAAGLEALLRGEPLPGRPVDFSHGDVDA---HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLA 92 (405)
T ss_pred CCcHHHHhhhhhhhhhhcCCcCCCCceecCCcCCCC---CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHH
Confidence 344456654444444443332 55789999999872 36778888888888766555689988899999999999999
Q ss_pred hhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc---CCCCCcCCHHHHH
Q 020968 102 RDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL---PAKGWEVDLDAVE 177 (319)
Q Consensus 102 ~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~d~~~l~ 177 (319)
+.+|..+++ ++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.+ .+.++++|+++++
T Consensus 93 ~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~ 172 (405)
T PRK06207 93 AFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLE 172 (405)
T ss_pred HHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHH
Confidence 988888888 899999999999999999999999999999999999999999999999999875 2346889999999
Q ss_pred hhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccc
Q 020968 178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKR 256 (319)
Q Consensus 178 ~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~ 256 (319)
++++++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++..+.++..+. ..+++|+++||||.
T Consensus 173 ~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~ 252 (405)
T PRK06207 173 EAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKT 252 (405)
T ss_pred HhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhh
Confidence 99888889999999999999999999999999999999999999999999998775555554443 34789999999999
Q ss_pred cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~ 309 (319)
|++||+|+||++++. +++++++..... ..+.+.+.|.++..++.+
T Consensus 253 ~~lpGlRiG~ii~~~--------~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~ 298 (405)
T PRK06207 253 ESLSGYRLGVAFGSP--------AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE 298 (405)
T ss_pred ccCcccceEEEEcCH--------HHHHHHHHHHhHhccCCCHHHHHHHHHHHhC
Confidence 999999999999753 588888877654 445677899998885543
No 22
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.6e-42 Score=314.70 Aligned_cols=273 Identities=22% Similarity=0.406 Sum_probs=230.1
Q ss_pred hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (319)
Q Consensus 17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 96 (319)
+.++.......++.+..... ..+++++|+.|+|+ +++++.+.+++.+..... ...|++..|.++||+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~i 75 (384)
T PRK06348 7 AKKYQQMEVNIMAEIATLAK------KFPDIIDLSLGDPD----LITDESIINAAFEDAKKG-HTRYTDSGGDVELIEEI 75 (384)
T ss_pred HHHHhcCCccHHHHHHHHHH------hcCCcEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHH
Confidence 55666666666777665432 13679999999987 566777777666554433 45899999999999999
Q ss_pred HHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHH
Q 020968 97 ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (319)
Q Consensus 97 a~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (319)
++++.+.+|..+++++|++|+|+++|+..++.+++++||+|+++.|+|..+...++..|.+++.++..++++|.+|++.+
T Consensus 76 a~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 155 (384)
T PRK06348 76 IKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKL 155 (384)
T ss_pred HHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHH
Confidence 99999888989999999999999999999999999999999999999999999999999999998876666788999999
Q ss_pred HhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCcc
Q 020968 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISK 255 (319)
Q Consensus 177 ~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK 255 (319)
++.++++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++. ..++..+.. .+++|+++||||
T Consensus 156 ~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK 234 (384)
T PRK06348 156 EALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSK 234 (384)
T ss_pred HHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchh
Confidence 999888889999999999999999999999999999999999999999999988653 334444432 468999999999
Q ss_pred ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~ 309 (319)
+|++||+|+||+++++ ++++.++..... ..+++++.|.+++.++..
T Consensus 235 ~~~l~GlRiG~~v~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 281 (384)
T PRK06348 235 DFAMTGWRIGYVIAPD--------YIIETAKIINEGICFSAPTISQRAAIYALKH 281 (384)
T ss_pred ccCCccccceeeecCH--------HHHHHHHHHHHhccCCCCHHHHHHHHHHHhC
Confidence 9999999999999864 577888777653 456789999999886644
No 23
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-41 Score=315.51 Aligned_cols=284 Identities=20% Similarity=0.336 Sum_probs=232.4
Q ss_pred CCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCC
Q 020968 10 NQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGI 89 (319)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~ 89 (319)
++|- .++.+++.+.+.....+.. ..+..+ ..+.++++|+.|+|+ +++++.+.+++.+.+.......|++..|.
T Consensus 3 ~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~-~~g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~ 75 (394)
T PRK05942 3 LDWI-TPADRLQALPPYVFARLDE-LKARAR-EQGLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGT 75 (394)
T ss_pred Cccc-chhhhhccCCCcHHHHHHH-HHHHHH-hcCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCC
Confidence 4563 4466777766654433332 222222 235679999999976 45667777877776654445689998999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC
Q 020968 90 LPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG 168 (319)
Q Consensus 90 ~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 168 (319)
++||+++++++++.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...+...|.+++.++.+.+++
T Consensus 76 ~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 155 (394)
T PRK05942 76 ASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPEND 155 (394)
T ss_pred HHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccC
Confidence 9999999999998778888888 489999999999999999999999999999999999888899999999999876677
Q ss_pred CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCe
Q 020968 169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPV 247 (319)
Q Consensus 169 ~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~v 247 (319)
|.+|++++++.+.++++++++++||||||.++|.+++++|+++|+++|++||+||+|.++.+++....++..+.. .+.+
T Consensus 156 ~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T PRK05942 156 WLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIG 235 (394)
T ss_pred CccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccE
Confidence 899999999988888999999999999999999999999999999999999999999999887655555555543 3467
Q ss_pred EEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968 248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL 308 (319)
Q Consensus 248 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~ 308 (319)
|+++||||.|++||+|+||++++. +++++++..... ..+++.++|.++..++.
T Consensus 236 i~~~SfSK~~~~~GlRiG~i~~~~--------~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 289 (394)
T PRK05942 236 VEFHTLSKTYNMAGWRVGFVVGNR--------HIIQGLRTLKTNLDYGIFSALQKAAETALQ 289 (394)
T ss_pred EEEecchhccCChhhheeeeecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence 999999999999999999999753 588888877653 45678889998888653
No 24
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-41 Score=312.08 Aligned_cols=276 Identities=22% Similarity=0.349 Sum_probs=236.9
Q ss_pred CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (319)
Q Consensus 15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 94 (319)
.++.+++++.++.++.+.....+. ...++++++|+.|+|+ +++++.+.+++.+.+.... ..|++..|.+++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~ 76 (387)
T PRK08960 4 GYSRRSRDIEPFHVMALLARANEL--EAAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPALRE 76 (387)
T ss_pred chhhHHHhCCchHHHHHHHHHHHH--HhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHHHH
Confidence 346778888888888887765433 1246789999999987 6789999999998876543 47988889999999
Q ss_pred HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (319)
++++++.+.+|..+++++|++|+|++++++.++.+++++||+|++++|+|+.+...++..|.+++.++.+.+++|.+|++
T Consensus 77 ~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 156 (387)
T PRK08960 77 AIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPA 156 (387)
T ss_pred HHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHH
Confidence 99999998888889999999999999999999999999999999999999999999999999999999876667889999
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS 254 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s 254 (319)
.+++.++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ..++... .+++|+++|||
T Consensus 157 ~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--~~~vi~~~S~S 233 (387)
T PRK08960 157 LVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--DDDAFVLNSFS 233 (387)
T ss_pred HHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--cCCEEEEeecc
Confidence 99999888889999999999999999999999999999999999999999999888653 2333332 45799999999
Q ss_pred cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 308 (319)
|.|+++|+|+||+++++ +++++++.... ...+++.+.|.++..++.
T Consensus 234 K~~g~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~ 280 (387)
T PRK08960 234 KYFGMTGWRLGWLVAPP--------AAVPELEKLAQNLYISASTPAQHAALACFE 280 (387)
T ss_pred cccCCcccEEEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhh
Confidence 99999999999999864 57888877765 345678999999888553
No 25
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-41 Score=313.91 Aligned_cols=258 Identities=23% Similarity=0.357 Sum_probs=218.9
Q ss_pred cCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCC-CCCC-cEEEeCCH
Q 020968 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK-LSPD-DVYLTLGC 119 (319)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~-~i~~~~G~ 119 (319)
.++.++++|+.|+|+ +.+++.+.+++.+.+.......|++ .|.++||+++++++++.+|.. ++++ +|++|+|+
T Consensus 41 ~~~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs 115 (410)
T PRK06290 41 HPDMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGS 115 (410)
T ss_pred cCCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCH
Confidence 356679999999987 6778889999887765444456875 799999999999999888887 8886 79999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccc
Q 020968 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNV 199 (319)
Q Consensus 120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 199 (319)
++++..++.+++++||.|+++.|+|..|...++..|.+++.++.+.+++|.+|++.+++.+.++++++++++||||||.+
T Consensus 116 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v 195 (410)
T PRK06290 116 KPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAV 195 (410)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcC
Confidence 99999999999999999999999999999999999999999999877778899999999888788999999999999999
Q ss_pred cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEeeCCCCCccc
Q 020968 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (319)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 278 (319)
+|.+++++|+++|++++++||+||+|.++.+++. +.++..+.. .+++|+++||||.|++||+|+||++++.
T Consensus 196 ~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~------- 267 (410)
T PRK06290 196 ATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNE------- 267 (410)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhheEeEEeCH-------
Confidence 9999999999999999999999999999988653 334333332 3568999999999999999999999853
Q ss_pred hHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968 279 SGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 279 ~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
++++.+...... ..+++.++|.++..++ +++.|.
T Consensus 268 -~l~~~l~~~~~~~~~~~~~~~q~aa~~~l-~~~~~~ 302 (410)
T PRK06290 268 -LIVKAFATVKDNNDSGQFIAIQKAGIYAL-DHPEIT 302 (410)
T ss_pred -HHHHHHHHHHhccccCCcHHHHHHHHHHh-hCcHHH
Confidence 578888777654 4455678999888744 333443
No 26
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-41 Score=312.78 Aligned_cols=283 Identities=20% Similarity=0.296 Sum_probs=228.8
Q ss_pred HHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968 18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (319)
Q Consensus 18 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 97 (319)
++++++....+..+.... ..++. .+.++++|+.|+|+ .+.++.+.+++.+.+.......|++..|..+||++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia 81 (403)
T PRK08636 8 NKIKRLPKYVFAEVNELK-MAARR-AGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAIC 81 (403)
T ss_pred HHHHhCCccHHHHHHHHH-HHHHh-cCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHH
Confidence 456777776666655533 22322 35789999999987 4456777777777665544578999899999999999
Q ss_pred HHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHH
Q 020968 98 DYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (319)
Q Consensus 98 ~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (319)
+++++.+|+.++++ +|++|+|+++++..++++++++||.|++++|+|+.+...++..|++++.++.+.++++++|++.+
T Consensus 82 ~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 161 (403)
T PRK08636 82 NWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQF 161 (403)
T ss_pred HHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhh
Confidence 99998888888887 79999999999999999999999999999999999999999999999999986555688998754
Q ss_pred ----Hhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC-CCeE
Q 020968 177 ----EALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI-VPVL 248 (319)
Q Consensus 177 ----~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~-~~vi 248 (319)
+++++ .+++++++++||||||.++|.+++++|+++|++++++||+||+|+++.+++...+++..+... +++|
T Consensus 162 ~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i 241 (403)
T PRK08636 162 FENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAV 241 (403)
T ss_pred hhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEE
Confidence 55553 467899999999999999999999999999999999999999999999876555566665432 4678
Q ss_pred EEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968 249 TLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 249 ~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
+++||||.|++||+|+||++++. ++++++...... ..+++.+.|.++..++...+.|.
T Consensus 242 ~~~S~SK~~~~~GlRiG~iv~~~--------~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~ 300 (403)
T PRK08636 242 ESYTLSKSYNMAGWRVGFVVGNK--------KLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCV 300 (403)
T ss_pred EEEecccccCCccceeeeeeCCH--------HHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHH
Confidence 89999999999999999999753 578888776653 34667888988876443233443
No 27
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=5e-41 Score=311.78 Aligned_cols=282 Identities=23% Similarity=0.353 Sum_probs=226.3
Q ss_pred HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHH
Q 020968 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD 98 (319)
Q Consensus 19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 98 (319)
++..+..+.+..+.. ..+.++. .++++|+|+.|+|+ +++++.+.+++.+.+......+|++..|.++||+++++
T Consensus 6 ~~~~~~~~~~~~~~~-~~~~~~~-~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~ 79 (405)
T PRK09148 6 RIRRLPPYVFEQVNR-LKAAARA-AGADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAA 79 (405)
T ss_pred hhhcCCccHHHHHHH-HHHHHHh-cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHH
Confidence 556666555555432 2222222 35789999999987 56788888988887655445689998999999999999
Q ss_pred HHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHH
Q 020968 99 YLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177 (319)
Q Consensus 99 ~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 177 (319)
++++.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.++.+.++++..++++..
T Consensus 80 ~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~ 159 (405)
T PRK09148 80 YYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAV 159 (405)
T ss_pred HHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHH
Confidence 9998778888887 899999999999999999999999999999999999999999999999999876555544555444
Q ss_pred hhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccc
Q 020968 178 ALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKR 256 (319)
Q Consensus 178 ~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~ 256 (319)
+...++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++..+.++..+.. .+++|+++||||.
T Consensus 160 ~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~ 239 (405)
T PRK09148 160 RHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKT 239 (405)
T ss_pred hhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccc
Confidence 333457789999999999999999999999999999999999999999999887655445544432 3467899999999
Q ss_pred cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
|++||+|+||++++. ++++++...+.. ..+++.+.|.++..++.+.+.+.
T Consensus 240 ~~~pGlR~G~~v~~~--------~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~ 290 (405)
T PRK09148 240 FSMAGWRMGFAVGNE--------RLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCI 290 (405)
T ss_pred cCCcchheeeeeCCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHH
Confidence 999999999999753 588888877763 45678899999988554333443
No 28
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=5.3e-41 Score=317.76 Aligned_cols=288 Identities=24% Similarity=0.363 Sum_probs=231.7
Q ss_pred CchHHHHhcccccHHHHHHHHH---HHhhhc----CCCCeEeccCCCCCCCC------------CCCC------------
Q 020968 15 KANEELKTASGITVRGVLNSLL---ENLNKN----DTRPLIPLGHGDPSAFP------------SFRT------------ 63 (319)
Q Consensus 15 ~~~~~~~~~~~~~i~~~~~~~~---~~~~~~----~~~~~i~l~~g~~~~~~------------~~~~------------ 63 (319)
.+|+++..+..+..+.+..+.+ +.+++. ++.++|+|++|+|+... .+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~ 88 (481)
T PTZ00377 9 DINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSL 88 (481)
T ss_pred ccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCcccccc
Confidence 3577888888886666543333 323233 45799999999995100 0222
Q ss_pred -cHHHHHHHHHHhhcC--CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEE
Q 020968 64 -ASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILL 139 (319)
Q Consensus 64 -~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-~~gd~Vl~ 139 (319)
|..+++++.+.+... ....|++..|.++||+++++++.+.+|..+++++|++|+|+++++..++++++ ++||.|++
T Consensus 89 ~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv 168 (481)
T PTZ00377 89 FPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMI 168 (481)
T ss_pred CCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEE
Confidence 457777777665542 34579999999999999999999888999999999999999999999999998 79999999
Q ss_pred cCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccccCHHHHHHHHHHHH
Q 020968 140 PRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAK 213 (319)
Q Consensus 140 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~ 213 (319)
+.|+|+.|...++..|.+++.++.+++++|.+|++++++++.+ +++++++++||||||.++|.+++++|+++|+
T Consensus 169 ~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~ 248 (481)
T PTZ00377 169 PIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCY 248 (481)
T ss_pred CCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999988777899999999998864 6788999999999999999999999999999
Q ss_pred HcCCEEEEeCCCCCccCCC-CCCCCCcc----cCC----CCCeEEEecCccc-cCCCcceeeEEEeeCCCCCccchHHHH
Q 020968 214 KLGIMVIADEVYDHLAFGN-TPFVPMGV----FGS----IVPVLTLGSISKR-WIVPGWRLGWLVTSDPNGILQDSGIVD 283 (319)
Q Consensus 214 ~~~~~li~D~a~~~~~~~~-~~~~~~~~----~~~----~~~vi~~~s~sK~-~~~~G~r~G~i~~~~~~~~~~~~~~~~ 283 (319)
++|++||+||+|.++.|++ .++.++.. +.. ..++|+++||||. +++||+|+||+++.+- .+++++
T Consensus 249 ~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~-----p~~li~ 323 (481)
T PTZ00377 249 EKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNI-----PPEVRE 323 (481)
T ss_pred HCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCC-----CHHHHH
Confidence 9999999999999998853 33444322 222 1368999999997 5889999999987320 135888
Q ss_pred HHHHhhhhcCCcchHHHHHHHHHH
Q 020968 284 SIKSFLNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 284 ~~~~~~~~~~~~~~~~q~~~~~~l 307 (319)
++........+++.+.|.+++.++
T Consensus 324 ~l~~~~~~~~~~~~~~Q~a~~~~l 347 (481)
T PTZ00377 324 QIYKLASINLCSNVVGQLMTGLMC 347 (481)
T ss_pred HHHHHhheecCCChHHHHHHHHHh
Confidence 888776544468899999998854
No 29
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.8e-40 Score=308.19 Aligned_cols=287 Identities=24% Similarity=0.461 Sum_probs=231.6
Q ss_pred CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (319)
Q Consensus 15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 94 (319)
+.|+++..+.++.+..+....+ .. +..+.++++|+.|+|+.++ +++++.+.+++.+.+.. ...|++..|.++||+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~i~l~~g~p~~~~-~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~ 79 (404)
T PRK09265 5 EKSSKLENVCYDIRGPVLKEAK-RL-EEEGHKILKLNIGNPAPFG-FEAPDEILRDVIRNLPT--AQGYSDSKGLFSARK 79 (404)
T ss_pred chhHHHHhcCcchhHHHHHHHH-HH-HHcCCCeEEecCCCCCcCC-CCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHH
Confidence 4566777777765555555443 33 4457799999999986432 56888898888876643 357999999999999
Q ss_pred HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (319)
++++++....+.++++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++.+.+++|.+|++
T Consensus 80 ~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~ 159 (404)
T PRK09265 80 AIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLD 159 (404)
T ss_pred HHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHH
Confidence 99999976444478899999999999999999999999999999999999999999999999998888765567889999
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS 254 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s 254 (319)
++++.++++++++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++....++..+....++|+++|||
T Consensus 160 ~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 239 (404)
T PRK09265 160 DIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLS 239 (404)
T ss_pred HHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecch
Confidence 99999888889999999999999999999999999999999999999999999998765555665555555789999999
Q ss_pred cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 308 (319)
|.|++||+|+||++++.+... .+.+++.++.......+++.+.|.++..++.
T Consensus 240 K~~~~pGlRiG~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 291 (404)
T PRK09265 240 KAYRVAGFRVGWMVLSGPKKH--AKGYIEGLDMLASMRLCANVPAQHAIQTALG 291 (404)
T ss_pred hhccCcccceEEEEEeCchHH--HHHHHHHHHHHhccccCCCcHHHHHHHHHhc
Confidence 999999999999997533200 0123444433323345678899999888553
No 30
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-40 Score=308.92 Aligned_cols=285 Identities=21% Similarity=0.344 Sum_probs=237.7
Q ss_pred CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (319)
Q Consensus 15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 94 (319)
+++.|++...++....+...+.+. . ..++++++|+.|.|. +++++.+.+++.+.+.... .+|++..|.++||+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~ 77 (402)
T PRK06107 5 VPAARVSRIKPSPSTAAAARAREL-R-AAGRSIVDLTVGEPD----FDTPDHIKQAAVAAIERGE-TKYTLVNGTPALRK 77 (402)
T ss_pred hhhHHhhhcCccHHHHHHHHHHHH-H-hccCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcCC-CCCCCCCCCHHHHH
Confidence 567777766665444444333222 1 236789999999987 5678889999998886543 57999999999999
Q ss_pred HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (319)
++++++++.+|..+++++|++|+|+++|+..++.+++++||+|++++|+|..|...+...+...+.++.+.+++|.+|++
T Consensus 78 ~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~ 157 (402)
T PRK06107 78 AIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPE 157 (402)
T ss_pred HHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHH
Confidence 99999998889888999999999999999999999999999999999999999988888888888888765567889999
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc-CCEEEEeCCCCCccCCCCCCCCCcccCC--CCCeEEEe
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL-GIMVIADEVYDHLAFGNTPFVPMGVFGS--IVPVLTLG 251 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~--~~~vi~~~ 251 (319)
.+++.+.++++++++++|+||||.+++.+++++++++|+++ ++++|+||+|.++.|++.+.+++..... .+++|+++
T Consensus 158 ~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~ 237 (402)
T PRK06107 158 ALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTN 237 (402)
T ss_pred HHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEe
Confidence 99999888889999999999999999999999999999998 9999999999999887755555555433 36899999
Q ss_pred cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
||||.|++||+|+||++++. ++++++...... ..+++.+.|.+++.++.++..|.
T Consensus 238 S~SK~~~~pGlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 293 (402)
T PRK06107 238 GVSKTYAMTGWRIGYAAGPA--------DLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFV 293 (402)
T ss_pred ccchhhcCcccceeeeecCH--------HHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHH
Confidence 99999999999999999853 588888887764 56789999999999664444443
No 31
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=3e-40 Score=304.66 Aligned_cols=252 Identities=21% Similarity=0.421 Sum_probs=218.6
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCC-CcEEEeCCHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQA 122 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~~~G~t~a 122 (319)
..++|+|+.|+|+ +++++.+.+++.+.+... ...|++..|.++||+++++++++.+|..+++ ++|++|+|++++
T Consensus 28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a 102 (384)
T PRK12414 28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG 102 (384)
T ss_pred hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence 4679999999987 577899999998877643 3589998999999999999999888877665 689999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
+..++++++++||+|+++.|+|..+...++..|.+++.++.++ +++.+|++.+++.++++++++++++||||||.+++.
T Consensus 103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~ 181 (384)
T PRK12414 103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA 181 (384)
T ss_pred HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence 9999999999999999999999999999999999999998754 457899999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 281 (319)
+++++|+++|+++++++|+||+|.++.|++....++..+.. .+++|+++||||.|++||+|+||+++++ ++
T Consensus 182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~--------~l 253 (384)
T PRK12414 182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA--------EL 253 (384)
T ss_pred HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH--------HH
Confidence 99999999999999999999999999987655445544432 4589999999999999999999999864 57
Q ss_pred HHHHHHhhh-hcCCcchHHHHHHHHHHhc
Q 020968 282 VDSIKSFLN-ISSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 282 ~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 309 (319)
++++..... ...+++.+.|.+++.++.+
T Consensus 254 ~~~l~~~~~~~~~~~s~~~q~a~~~~l~~ 282 (384)
T PRK12414 254 MDEIRKVHQFMVFSADTPMQHAFAEALAE 282 (384)
T ss_pred HHHHHHHHhheecCCCcHHHHHHHHHhcC
Confidence 888887765 3457789999999885544
No 32
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=304.93 Aligned_cols=278 Identities=23% Similarity=0.284 Sum_probs=234.4
Q ss_pred chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (319)
Q Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 95 (319)
++++++...+..++++.+.+.+ .. ..+.+.++|+.|+|+ +++++.+.+++.+.+.......|++..|.++||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ 75 (386)
T PRK07550 2 LNPLIAALFPPPIPEVRAWLAG-YD-GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREA 75 (386)
T ss_pred cchhhhhcCChHHHHHHHHHHH-Hh-hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHH
Confidence 3556666777788888876532 22 346679999999987 46688899998887655445689888899999999
Q ss_pred HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (319)
Q Consensus 96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (319)
+++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.+++.++.+|++.
T Consensus 76 ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 155 (386)
T PRK07550 76 YAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAA 155 (386)
T ss_pred HHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHH
Confidence 99999998898899999999999999999999999999999999999999999999999999999998766678899999
Q ss_pred HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCc
Q 020968 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSIS 254 (319)
Q Consensus 176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~s 254 (319)
++++++++++++++++||||||.+++.+++++|+++|+++|++||+|++|+++.+++....++... ...+++++++|||
T Consensus 156 l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 235 (386)
T PRK07550 156 AEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFS 235 (386)
T ss_pred HHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecch
Confidence 999998888999999999999999999999999999999999999999999987654333333222 2346799999999
Q ss_pred cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK 307 (319)
Q Consensus 255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l 307 (319)
|.|++||+|+||+++++ +++++++..... ..+++.+.|.+++.++
T Consensus 236 K~~g~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l 281 (386)
T PRK07550 236 KSYALTGHRVGAVVASP--------ARIAEIEKFMDTVAICAPRIGQIAVAWGL 281 (386)
T ss_pred hhccCcccceEeeecCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHh
Confidence 99999999999999854 477777776653 4567899999988855
No 33
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=6.4e-40 Score=302.79 Aligned_cols=274 Identities=23% Similarity=0.439 Sum_probs=232.7
Q ss_pred chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (319)
Q Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 95 (319)
++.++++...+.++.++..+. ..+++++|+.|.|+ +++++.+.+++.+.+... ...|++..|.++||++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ 73 (387)
T PRK07683 5 INPRVKDIQISGIRQFSNMVQ------NYDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKA 73 (387)
T ss_pred hhHHHHhCCccHHHHHHHHHH------hcCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence 366788888888888776542 24688999999976 567788999999887654 3589988999999999
Q ss_pred HHHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968 96 IADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 96 ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (319)
+++++.+.+|..++++ +|++|+|+++|+.+++++++++||+|+++.|+|..|...++..|++++.++.+. +++.+|.+
T Consensus 74 ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~ 152 (387)
T PRK07683 74 ACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAE 152 (387)
T ss_pred HHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHH
Confidence 9999998888888898 999999999999999999999999999999999999999999999999998753 56788999
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecC
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSI 253 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~ 253 (319)
.+++.+.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ..++..+ +..+++|+++||
T Consensus 153 ~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~s~ 231 (387)
T PRK07683 153 ALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVINGL 231 (387)
T ss_pred HHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccCCcCCeEEEeec
Confidence 99999888889999999999999999999999999999999999999999999988653 3344444 234689999999
Q ss_pred ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcc
Q 020968 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKR 310 (319)
Q Consensus 254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~ 310 (319)
||.|++||+|+||++++. ++++++...... ..+++.+.|.++..++.+.
T Consensus 232 SK~~~~pGlRiG~i~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 281 (387)
T PRK07683 232 SKSHSMTGWRIGFLFAPS--------YLAKHILKVHQYNVTCASSISQYAALEALTAG 281 (387)
T ss_pred cccccCccceeEEEEcCH--------HHHHHHHHHHHhccCCCChHHHHHHHHHHhCC
Confidence 999999999999999863 578887766543 3456788999998855443
No 34
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.5e-40 Score=306.23 Aligned_cols=273 Identities=23% Similarity=0.398 Sum_probs=224.9
Q ss_pred HHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHH
Q 020968 20 LKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADY 99 (319)
Q Consensus 20 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 99 (319)
++.++.+.++.+...+. ......+.++++|+.|+|+ +++++.+.+++.+.+. ....|++..|.++||++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~ 76 (393)
T TIGR03538 4 LSRLQPYPFEKLAALLA-GVTPPASKPPIALSIGEPK----HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARW 76 (393)
T ss_pred hhhCCccHHHHHHHHHH-hhhhhcCCCeEEecCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHH
Confidence 34455555655554432 2222346899999999987 6788999999998764 246899999999999999999
Q ss_pred HhhhCCCC--CCCC-cEEEeCCHHHHHHHHHHHhcCCCCE--EEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968 100 LNRDLPYK--LSPD-DVYLTLGCTQAIEVILTVLARPGAN--ILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 100 ~~~~~g~~--~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~--Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (319)
+++.+|.. ++++ +|++|+|+++++..++++++++||. |+++.|+|..|...++..|++++.++++++++|.+|.+
T Consensus 77 ~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 156 (393)
T TIGR03538 77 LERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFD 156 (393)
T ss_pred HHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHH
Confidence 98877765 6775 7999999999999999999999986 99999999999999999999999999876777899999
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC-CCCCC-cc---c--CCCCCe
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPM-GV---F--GSIVPV 247 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~-~~---~--~~~~~v 247 (319)
++++++.++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. .+.+. .. . ...+++
T Consensus 157 ~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 236 (393)
T TIGR03538 157 AVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRC 236 (393)
T ss_pred HHHHHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccE
Confidence 99988877889999999999999999999999999999999999999999999987642 22221 11 1 134689
Q ss_pred EEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968 248 LTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK 307 (319)
Q Consensus 248 i~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l 307 (319)
|+++||||.|++||+|+||++++. ++++++...... ..+++.+.|.++...+
T Consensus 237 i~i~S~SK~~~~~GlRvG~~i~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l 289 (393)
T TIGR03538 237 LVFHSLSKRSNLPGLRSGFVAGDA--------EILKAFLRYRTYHGCAMPIPTQLASIAAW 289 (393)
T ss_pred EEEecchhhcCCcccceEEEecCH--------HHHHHHHHHHHhhccCcCHHHHHHHHHHh
Confidence 999999999999999999999863 577888776653 4567889998877755
No 35
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-40 Score=304.51 Aligned_cols=276 Identities=22% Similarity=0.406 Sum_probs=233.3
Q ss_pred CCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHH
Q 020968 14 FKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPAR 93 (319)
Q Consensus 14 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr 93 (319)
+.+|.++.......++.+..... ..+++|+|+.|+|+ +++++.+.+++.+.+... ...|.+..|.++||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr 76 (391)
T PRK08361 8 YFIAGRINLIQRSKIRELFERAS------KMENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGIPELR 76 (391)
T ss_pred cchhHHHHhCCccHHHHHHHHHH------hhcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHH
Confidence 34577777777667777654331 13679999999987 566889999998877654 34798888999999
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968 94 RAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (319)
Q Consensus 94 ~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (319)
+++++++.+.+|.++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.+++++|.+|+
T Consensus 77 ~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 156 (391)
T PRK08361 77 EAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDP 156 (391)
T ss_pred HHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCH
Confidence 99999998888888999999999999999999999999999999999999999999999999999999987766788999
Q ss_pred HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecC
Q 020968 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI 253 (319)
Q Consensus 174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~ 253 (319)
+.+++.++++++++++++|+||||.+++.+++++|+++|+++++++|+||+|.++.+++....++.... .+++++++|+
T Consensus 157 ~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i~~~s~ 235 (391)
T PRK08361 157 DELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTILANSF 235 (391)
T ss_pred HHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEEEEecC
Confidence 999999988889999999999999999999999999999999999999999999987654444444443 2579999999
Q ss_pred ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhc
Q 020968 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~ 309 (319)
||.|+++|+|+||+++++ ++++++..... ...+++.+.|.++..++.+
T Consensus 236 SK~~~~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 284 (391)
T PRK08361 236 SKTFAMTGWRLGFVIAPE--------QVIKDMIKLHAYIIGNVASFVQIAGIEALRS 284 (391)
T ss_pred chhcCCcHhhhhhhccCH--------HHHHHHHHHHhhhccCCChHHHHHHHHHhcC
Confidence 999999999999999853 47777766654 3456788999998885543
No 36
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=6e-40 Score=303.20 Aligned_cols=276 Identities=21% Similarity=0.332 Sum_probs=227.7
Q ss_pred HHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968 18 EELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (319)
Q Consensus 18 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 97 (319)
.++.....+.++.+..... ..++++|+.|.|+ .+.++.+.+++.+.+... ..+|++..|.++||++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia 73 (387)
T PRK08912 6 PVFADLPTTIFEVMSQLAR-------EHGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVA 73 (387)
T ss_pred HHHhhCCCCHHHHHHHHHh-------hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHH
Confidence 3455555555555444332 4689999999987 455677888887766543 458999999999999999
Q ss_pred HHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHH
Q 020968 98 DYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (319)
Q Consensus 98 ~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (319)
+++++.+|..++++ +|++|+|+++++..++..++++||+|+++.|+|..+...++..|.+++.++.++ +++.+|++.+
T Consensus 74 ~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l 152 (387)
T PRK08912 74 AHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAAL 152 (387)
T ss_pred HHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHH
Confidence 99998888888998 999999999999999999999999999999999999999999999999998753 4578999999
Q ss_pred HhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCcc
Q 020968 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISK 255 (319)
Q Consensus 177 ~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK 255 (319)
++.+.++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++....++..+.. .+++|+++|+||
T Consensus 153 ~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 232 (387)
T PRK08912 153 AAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGK 232 (387)
T ss_pred HHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechh
Confidence 9998888899999999999999999999999999999999999999999999887644445444432 468999999999
Q ss_pred ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
.|+++|+|+||++++. ++++++...... ..+.++..|.+++..+...++|.
T Consensus 233 ~~g~~GlRiG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 284 (387)
T PRK08912 233 IFSLTGWKVGFVCAAP--------PLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYF 284 (387)
T ss_pred hccCcCceeEEEecCH--------HHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHH
Confidence 9999999999999853 577877776653 34567778888887665444443
No 37
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1e-39 Score=301.80 Aligned_cols=275 Identities=24% Similarity=0.412 Sum_probs=232.5
Q ss_pred chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (319)
Q Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 95 (319)
++.++.....+.++.+..... .++ ..++++++|+.|+|+ +++++.+.+++.+.+... ...|++..|.++||++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ 75 (388)
T PRK07337 3 LAARVDAIEPFYVMELAKEAQ-ALE-RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLAPLREA 75 (388)
T ss_pred hhhHhHhcCchHHHHHHHHHH-HHH-hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHH
Confidence 466777777777777665443 332 246789999999987 567888999998877643 4579988899999999
Q ss_pred HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (319)
Q Consensus 96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (319)
+++++++.+|..+++++|++|+|+++|+..++.+++++||+|++++|+|..+...++..|.+++.++.+.+++|.+|+++
T Consensus 76 ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 155 (388)
T PRK07337 76 IAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAAD 155 (388)
T ss_pred HHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHH
Confidence 99999988898899999999999999999999999999999999999999999999999999999998766678999999
Q ss_pred HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255 (319)
Q Consensus 176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK 255 (319)
+++.++++++++++++|+||||.+++.+++++|+++|+++++++|+||+|.++.+++. +.+... ..+++|+++|+||
T Consensus 156 l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~--~~~~vi~~~S~SK 232 (388)
T PRK07337 156 VEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSALS--LGDDVITINSFSK 232 (388)
T ss_pred HHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CcChhh--ccCCEEEEEechh
Confidence 9999988889999999999999999999999999999999999999999999887654 222222 2357899999999
Q ss_pred ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 308 (319)
.|++||+|+||+++++ ++++++..... ...+++.+.|.++..++.
T Consensus 233 ~~~~~G~RiG~~~~~~--------~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~ 278 (388)
T PRK07337 233 YFNMTGWRLGWLVVPE--------ALVGTFEKLAQNLFICASALAQHAALACFE 278 (388)
T ss_pred hcCCchhheeeeecCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHhc
Confidence 9999999999999863 57888877765 345678999999888553
No 38
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-40 Score=302.26 Aligned_cols=278 Identities=25% Similarity=0.392 Sum_probs=231.0
Q ss_pred hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (319)
Q Consensus 17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 96 (319)
|++++....+.++.+..... ..+++++|+.|+|+ +++++.+.+++.+.+.... ..|++..|.++||+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~l 70 (382)
T PRK06108 2 RPAARALPESGIREVANAGR------GREGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREAL 70 (382)
T ss_pred chhhhhCCchHHHHHHHHHh------ccCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHH
Confidence 44555666666666554332 23679999999987 6788999999998876643 4699989999999999
Q ss_pred HHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC-CCCcCCHHH
Q 020968 97 ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDA 175 (319)
Q Consensus 97 a~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~ 175 (319)
++++.+.+|..+++++|++|+|+++++..++..++++||+|++++|+|..+...++..|++++.++.+.+ .+|.+|++.
T Consensus 71 a~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~ 150 (382)
T PRK06108 71 ARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDR 150 (382)
T ss_pred HHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHH
Confidence 9999988888889999999999999999999999999999999999999999999999999999998653 467899999
Q ss_pred HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC-CCCCCCCcccC-CCCCeEEEecC
Q 020968 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMGVFG-SIVPVLTLGSI 253 (319)
Q Consensus 176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~~~~~-~~~~vi~~~s~ 253 (319)
+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.++ +....++..+. ..+++++++||
T Consensus 151 l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 230 (382)
T PRK06108 151 LLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSF 230 (382)
T ss_pred HHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeec
Confidence 99998888899999999999999999999999999999999999999999999886 33333333332 34689999999
Q ss_pred ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhccccc
Q 020968 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSF 313 (319)
Q Consensus 254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~ 313 (319)
||.|+++|+|+||++++. +++++++..... ..+++.+.|.++..++.+.+.+
T Consensus 231 SK~~g~~G~RiG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~ 283 (382)
T PRK06108 231 SKNWAMTGWRLGWLVAPP--------ALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDF 283 (382)
T ss_pred hhhccCcccceeeeeCCH--------HHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHH
Confidence 999999999999999853 577877766543 4567899999888866443333
No 39
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-39 Score=300.06 Aligned_cols=278 Identities=22% Similarity=0.334 Sum_probs=230.5
Q ss_pred chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (319)
Q Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 95 (319)
+++++....++.+..+..... ..+++++|+.|.|+ +++++.+.+++.+.+.......|++..|.+++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~ 73 (389)
T PRK05957 4 FTSRMDAVQSPIIPVVGQLIR------ENPGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEA 73 (389)
T ss_pred hhHHHHhcCCcHHHHHHHHHH------hCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Confidence 466776666555554433221 13678999999987 67889999999887765444679998999999999
Q ss_pred HHHHHhhhCCCCCC-CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968 96 IADYLNRDLPYKLS-PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 96 ia~~~~~~~g~~~~-~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (319)
+++++.+..|..++ +++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.+ +++.+|++
T Consensus 74 ~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~ 151 (389)
T PRK05957 74 ITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPE 151 (389)
T ss_pred HHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHH
Confidence 99999988888777 7789999999999999999999999999999999999988889999999998874 45789999
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecC
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSI 253 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~ 253 (319)
+++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.+..+.... +...++|+++||
T Consensus 152 ~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 231 (389)
T PRK05957 152 AIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSL 231 (389)
T ss_pred HHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecc
Confidence 9999998889999999999999999999999999999999999999999999998875443333333 444689999999
Q ss_pred ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhccccc
Q 020968 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSF 313 (319)
Q Consensus 254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~ 313 (319)
||.|++||+|+||+++++ +++++++..... ..+++.+.|.++..++.....|
T Consensus 232 SK~~g~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 284 (389)
T PRK05957 232 SKAYGFASWRIGYMVIPI--------HLLEAIKKIQDTILICPPVVSQYAALGALQVGKSY 284 (389)
T ss_pred hhhccCccceeEEEecCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHH
Confidence 999999999999999853 588888877764 4567889999988855443333
No 40
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=5.1e-40 Score=303.41 Aligned_cols=277 Identities=20% Similarity=0.318 Sum_probs=230.5
Q ss_pred hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (319)
Q Consensus 17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 96 (319)
+++++.+..+.++.+.... +..++|+|+.|.|+ +++++.+.+++.+.+... ...|++..|.+++|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~ 76 (386)
T PRK09082 9 QSKLPNVGTTIFTVMSALA-------AEHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAI 76 (386)
T ss_pred hhHhhccCccHHHHHHHHH-------hhCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHH
Confidence 3466666655444443322 24578999999987 567888999998877644 35799889999999999
Q ss_pred HHHHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHH
Q 020968 97 ADYLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDA 175 (319)
Q Consensus 97 a~~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 175 (319)
++++.+.+|...+++ +|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.++.+. .++.+|+++
T Consensus 77 a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~ 155 (386)
T PRK09082 77 AAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQR 155 (386)
T ss_pred HHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHH
Confidence 999998888777775 899999999999999999999999999999999999999999999999999864 368899999
Q ss_pred HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCc
Q 020968 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSIS 254 (319)
Q Consensus 176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~s 254 (319)
+++.++++++++++++|+||||.+++.+++++|+++|+++++++|+||+|.++.+++.+..++..+.. .+++++++|||
T Consensus 156 l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~S 235 (386)
T PRK09082 156 FAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFG 235 (386)
T ss_pred HHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeech
Confidence 99999888899999999999999999999999999999999999999999999987655555555433 46899999999
Q ss_pred cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHhcccccc
Q 020968 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
|.|++||+|+||+++++ ++++.++.... ...+++.+.|.+++.++...+.+.
T Consensus 236 K~~~~~G~RiG~iv~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 288 (386)
T PRK09082 236 KTYHVTGWKVGYCVAPA--------ALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHY 288 (386)
T ss_pred hhccchhhhhhhhhCCH--------HHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHH
Confidence 99999999999999863 58888887765 345679999999888554344443
No 41
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.2e-39 Score=302.29 Aligned_cols=286 Identities=28% Similarity=0.498 Sum_probs=228.1
Q ss_pred hHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968 17 NEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (319)
Q Consensus 17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 96 (319)
+.++.++. ..++.+..... .. ...+.++|+|+.|.|.. ..+++++.+.+++.+.+... ...|++..|..+||+++
T Consensus 5 ~~~~~~~~-~~~~~~~~~~~-~~-~~~~~~~i~l~~g~p~~-~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~i 79 (398)
T PRK08363 5 SERAMGVE-YAIRDVVLPAR-EL-EKKGIKVIRLNIGDPVK-FDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAI 79 (398)
T ss_pred hHHHHhcc-HHHHHHHHHHH-HH-HhcCCCeEEEeCCCCCc-CCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHH
Confidence 44555553 34555443332 22 23467999999999842 12678899999998877654 34798889999999999
Q ss_pred HHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHH
Q 020968 97 ADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAV 176 (319)
Q Consensus 97 a~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 176 (319)
+++++..+|..+++++|++|+|+++|+.+++.+++++||+|+++.|+|..+...++..|.+++.++..+++++.+|++.+
T Consensus 80 a~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l 159 (398)
T PRK08363 80 VKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDI 159 (398)
T ss_pred HHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHH
Confidence 99999888989999999999999999999999999999999999999999999999999988887433345678999999
Q ss_pred HhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (319)
Q Consensus 177 ~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~ 256 (319)
++.+.++++++++++||||||.+++.+++++|+++|+++|+++|+|++|.++.+++. +.++..+....++|+++||||.
T Consensus 160 ~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~ 238 (398)
T PRK08363 160 RKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKV 238 (398)
T ss_pred HhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhc
Confidence 999888889999999999999999999999999999999999999999999888653 3344455555689999999999
Q ss_pred cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh----hcCCcchHHHHHHHHHHhcccccc
Q 020968 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN----ISSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
|++||+|+||+++.++. ++++.+..... ...+++.+.|.+++.++.+..+|.
T Consensus 239 ~~~~GlRiG~~~~~~~~------~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l 294 (398)
T PRK08363 239 YFATGWRLGYIYFVDPE------GKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYL 294 (398)
T ss_pred cCCccceEEEEEEeCcH------HHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHH
Confidence 99999999999973221 35555443322 234678999999988664433333
No 42
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=5.9e-40 Score=302.34 Aligned_cols=251 Identities=24% Similarity=0.451 Sum_probs=216.5
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAI 123 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai 123 (319)
.++|+|+.|+|+ +++++.+.+++.+.+... ...|++..|.+++|+++++++++.+|..++++ +|++|+|+++|+
T Consensus 20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 94 (378)
T PRK07682 20 EGVISLGVGEPD----FVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL 94 (378)
T ss_pred CCeEEeCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 579999999987 566777888888876643 45799888999999999999998888888876 799999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
.+++++++++||+|++++|+|..|...++..|.+++.++.+.++++++|++.+++++.++++++++++|+||||.+++.+
T Consensus 95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~ 174 (378)
T PRK07682 95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS 174 (378)
T ss_pred HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence 99999999999999999999999999999999999999876556788999999999888889999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
++++|+++|+++++++|+||+|.++.+++. +.++..+.. .+++++++||||.|++||+|+||++++. +++
T Consensus 175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~i 245 (378)
T PRK07682 175 ELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV--------YFS 245 (378)
T ss_pred HHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH--------HHH
Confidence 999999999999999999999999998753 233333332 3689999999999999999999999853 588
Q ss_pred HHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968 283 DSIKSFLNI-SSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~q~~~~~~l~~ 309 (319)
++++..... ..+++.+.|.++..++.+
T Consensus 246 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 273 (378)
T PRK07682 246 EAMLKIHQYSMMCAPTMAQFAALEALRA 273 (378)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHHhC
Confidence 888776653 456789999998885544
No 43
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-39 Score=301.38 Aligned_cols=283 Identities=25% Similarity=0.410 Sum_probs=231.5
Q ss_pred CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (319)
Q Consensus 15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 94 (319)
+++.++....++.++.+...... .. ..+.++++|+.|.|+ +++++.+.+++.+... ....|++..|.+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~ 73 (397)
T PRK07568 2 KISKRVLNMPASPIRKLVPYADE-AK-KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIPELRE 73 (397)
T ss_pred chhhHhhhCCcchHHHHHHHHHH-HH-hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHHHH
Confidence 35667777777778877654321 11 124679999999977 5678899998877643 2457999899999999
Q ss_pred HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcC-CH
Q 020968 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEV-DL 173 (319)
Q Consensus 95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-d~ 173 (319)
++++++. .+|.++++++|++|+|+++|+..++..++++||+|++++|+|..+...++..|.+++.++.+.++++.. ++
T Consensus 74 ~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~ 152 (397)
T PRK07568 74 AFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSK 152 (397)
T ss_pred HHHHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCH
Confidence 9999998 478888999999999999999999999999999999999999999988999999999999865555553 68
Q ss_pred HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEec
Q 020968 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGS 252 (319)
Q Consensus 174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s 252 (319)
++++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++..+.++..+.. .+++++++|
T Consensus 153 ~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S 232 (397)
T PRK07568 153 EEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDS 232 (397)
T ss_pred HHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEec
Confidence 9999998888899999999999999999999999999999999999999999999887655555555543 578999999
Q ss_pred CccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968 253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSF 313 (319)
Q Consensus 253 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 313 (319)
|||.|++||+|+||++++++ ++++++........+++.+.|.+++.++...+.+
T Consensus 233 ~SK~~~~~G~R~G~~~~~~~-------~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 286 (397)
T PRK07568 233 VSKRYSACGARIGCLISKNK-------ELIAAAMKLCQARLSPPTLEQIGAAALLDTPESY 286 (397)
T ss_pred chhhccCCCcceEEEecCCH-------HHHHHHHHHhhccCCCCcHHHHHHHHHhhCCHHH
Confidence 99999999999999998642 4777666554433467899999998855433333
No 44
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.5e-39 Score=300.67 Aligned_cols=273 Identities=24% Similarity=0.452 Sum_probs=229.0
Q ss_pred chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (319)
Q Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 95 (319)
++++++....+.++++..... +.+++|+|+.|.|+ +.+++.+.+++.+.+... ...|++..|.++||++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ 75 (391)
T PRK07309 7 FNKQLDKIEVSLIRQFDQSIS------DIPGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQA 75 (391)
T ss_pred HHhhhhhcCccHHHHHHHHHH------hcCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHH
Confidence 367787777777777665332 23679999999987 566888899998877643 3479888899999999
Q ss_pred HHHHHhhhCCCCCCC-CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968 96 IADYLNRDLPYKLSP-DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 96 ia~~~~~~~g~~~~~-~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (319)
+++++...+|+.+++ ++|++|+|+++++++++++++++||+|++++|+|..+...++..|.+++.++.+ ..++.+|++
T Consensus 76 ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~ 154 (391)
T PRK07309 76 AADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPE 154 (391)
T ss_pred HHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecC-CcCCcCCHH
Confidence 999999888877774 799999999999999999999999999999999999999999999999999874 345789999
Q ss_pred HHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968 175 AVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (319)
Q Consensus 175 ~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~ 251 (319)
.++++++. +++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..+.. +++|+++
T Consensus 155 ~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~-~~~i~~~ 233 (391)
T PRK07309 155 MLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLP-DQTILIN 233 (391)
T ss_pred HHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhcc-CCEEEEe
Confidence 99998863 5789999999999999999999999999999999999999999999986654445444433 6899999
Q ss_pred cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~ 309 (319)
||||.|++||+|+||++++. ++++++...... ..+++.+.|.++..++.+
T Consensus 234 S~SK~~g~~GlRvG~~v~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 284 (391)
T PRK07309 234 GLSKSHAMTGWRIGLIFAPA--------EFTAQLIKSHQYLVTAATTMAQFAAVEALTN 284 (391)
T ss_pred cChhhccCccceeEEEEeCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHhC
Confidence 99999999999999999864 588888766543 456788999999885544
No 45
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-39 Score=299.97 Aligned_cols=279 Identities=24% Similarity=0.430 Sum_probs=239.8
Q ss_pred CchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH
Q 020968 15 KANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARR 94 (319)
Q Consensus 15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 94 (319)
++|.++..+.++.++.+.....+. . ..++++++|+.|+|+ +++++.+.+++.+.+.... ..|++..|..+||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~ 75 (393)
T PRK05764 3 KLSKRVSRVTPSATLAVTAKAKEL-K-AQGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIPELRE 75 (393)
T ss_pred chhhhhhhcCchHHHHHHHHHHHH-H-hccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChHHHHH
Confidence 468899999999998888765433 2 235789999999987 5778999999988876543 46998889999999
Q ss_pred HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHH
Q 020968 95 AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 95 ~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 174 (319)
++++++.+.+|..+++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.+++.++.++++++.+|++
T Consensus 76 ~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 155 (393)
T PRK05764 76 AIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVE 155 (393)
T ss_pred HHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHH
Confidence 99999988888888899999999999999999999999999999999999999999999999999999876667889999
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc--CCCCCeEEEec
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF--GSIVPVLTLGS 252 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~~~vi~~~s 252 (319)
.+++.++++++++++++|+||||.+++.+++++|+++|+++++++|+|++|+++.+++..+.++..+ +..+++++++|
T Consensus 156 ~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 235 (393)
T PRK05764 156 QLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNG 235 (393)
T ss_pred HHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEec
Confidence 9999998888999999999999999999999999999999999999999999998866544454443 23468999999
Q ss_pred CccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968 253 ISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKL 308 (319)
Q Consensus 253 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~ 308 (319)
|||.++++|+|+||++++. +++++++..... ...++++.|.++..++.
T Consensus 236 ~SK~~~~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 284 (393)
T PRK05764 236 FSKAYAMTGWRLGYAAGPK--------ELIKAMSKLQSHSTSNPTSIAQYAAVAALN 284 (393)
T ss_pred CcccccCccceeEEEecCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHc
Confidence 9999999999999999753 588888777653 45778999998888553
No 46
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=3e-39 Score=298.55 Aligned_cols=276 Identities=26% Similarity=0.419 Sum_probs=228.6
Q ss_pred HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHH
Q 020968 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD 98 (319)
Q Consensus 19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 98 (319)
+++.++.+.++.+..... ..++++|+.|.|+ .+.++.+.+++.+.+... ..+|++..|.+++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~ 72 (387)
T PRK07777 5 RLRPFGTTIFAEMSALAV-------RTGAVNLGQGFPD----EDGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAA 72 (387)
T ss_pred hhhhcCccHHHHHHHHHh-------hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHH
Confidence 456666666666665552 4689999999987 345667888887776653 3579988899999999999
Q ss_pred HHhhhCCCCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC-CCCcCCHHHH
Q 020968 99 YLNRDLPYKLSPD-DVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA-KGWEVDLDAV 176 (319)
Q Consensus 99 ~~~~~~g~~~~~~-~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l 176 (319)
++.+.+|..++++ +|++|+|+++|+.+++.+++++||+|+++.|+|..+...++..|.+++.++.++. .+|.+|++++
T Consensus 73 ~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l 152 (387)
T PRK07777 73 QRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDAL 152 (387)
T ss_pred HHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHH
Confidence 9988888877776 7999999999999999999999999999999999999999999999999988765 4688999999
Q ss_pred HhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCcc
Q 020968 177 EALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISK 255 (319)
Q Consensus 177 ~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK 255 (319)
++.+.+++++|++++|+||||.+++.+++++|+++|+++++++|+||+|.++.+++..+.++..+.. .+++|+++||||
T Consensus 153 ~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 232 (387)
T PRK07777 153 RAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAK 232 (387)
T ss_pred HHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechh
Confidence 9998888899999999999999999999999999999999999999999999886654445544432 467999999999
Q ss_pred ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
.|++||+|+||++++. +++++++..... ....+.+.|.+++.++...+.|.
T Consensus 233 ~~g~~GlRiG~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 284 (387)
T PRK07777 233 TFNVTGWKIGWACGPA--------PLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWV 284 (387)
T ss_pred hccCcCceeEEEecCH--------HHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHH
Confidence 9999999999999854 477777766553 34567888988888555444444
No 47
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.6e-39 Score=302.33 Aligned_cols=260 Identities=17% Similarity=0.205 Sum_probs=209.8
Q ss_pred HHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC----CCCCCCCCcCCHHHHHHHHHHHhhhCC
Q 020968 30 GVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----RFNCYSSTVGILPARRAIADYLNRDLP 105 (319)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g 105 (319)
.+.+++.+...+..++++++|+.|+|+ +++++.+.+++.+.+... ....|++..|.++||+++++++.+.+|
T Consensus 19 ~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g 94 (409)
T PRK07590 19 EIARRVNAFREANPEAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARG 94 (409)
T ss_pred HHHHHHHHHhhhcCCCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 344444444444456789999999987 678899999998877652 346898889999999999999988889
Q ss_pred CCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCe-----------EEEEeccCCCCCcCCHH
Q 020968 106 YKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLE-----------VRHFDLLPAKGWEVDLD 174 (319)
Q Consensus 106 ~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~d~~ 174 (319)
..+++++|++|+|+++++.+++ .++++||+|++++|+|..|...++..|.+ ++.++.+.++++.+|.+
T Consensus 95 ~~~~~~~I~it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~ 173 (409)
T PRK07590 95 CDISADEIFISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP 173 (409)
T ss_pred CcCChhhEEECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc
Confidence 9999999999999999999865 45689999999999999999999999987 88888865556666543
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecC
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSI 253 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~ 253 (319)
. ++++++++++||||||.++|.+++++|+++|+++|++||+||+|.++.+++..+.++..+.. .+++|+++||
T Consensus 174 ~------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf 247 (409)
T PRK07590 174 E------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSF 247 (409)
T ss_pred c------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecC
Confidence 2 47889999999999999999999999999999999999999999999887654455555543 2479999999
Q ss_pred ccccCCCcceeeEEEeeCCCCCccchHHHHH------------HHHhhh-hcCCcchHHHHHHHHHHh
Q 020968 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDS------------IKSFLN-ISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~~~~~q~~~~~~l~ 308 (319)
||+|++||+|+||+++++ +++++ +..... ...+++.+.|.+++.++.
T Consensus 248 SK~~~~pGlRiG~~i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~ 307 (409)
T PRK07590 248 SKTAGFTGTRCAYTVVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYS 307 (409)
T ss_pred ccccCCcCceeEEEEcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhc
Confidence 999999999999999864 35541 122222 234578899999988553
No 48
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=297.62 Aligned_cols=249 Identities=22% Similarity=0.328 Sum_probs=208.5
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+.++++|+.|+|+ +++++.+.+++.+... ....|++..|..+||+++++++++.+|..+++++|++|+|++++
T Consensus 22 ~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a 95 (374)
T PRK05839 22 KEYKGLDLTIGEPQ----FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREV 95 (374)
T ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH
Confidence 35699999999987 5678899999887653 25689998999999999999999988988999999999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcccccc
Q 020968 123 IEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200 (319)
Q Consensus 123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 200 (319)
+..++.+++ ++||.|+++.|+|..|...++..|++++.++.+.+++|.+|....+ + ++++++++++||||||.++
T Consensus 96 l~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~ 172 (374)
T PRK05839 96 LFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTL 172 (374)
T ss_pred HHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCccc
Confidence 999988874 5789999999999999999999999999999876677877765443 2 3688999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc------CCCCCeEEEecCccccCCCcceeeEEEeeCCCC
Q 020968 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF------GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG 274 (319)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~------~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~ 274 (319)
+.+++++|+++|+++|++||+||+|.++.+++ ...++... ...+++|+++||||.|++||+|+||++++.
T Consensus 173 s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~--- 248 (374)
T PRK05839 173 SLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA--- 248 (374)
T ss_pred CHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH---
Confidence 99999999999999999999999999986543 22332221 233689999999999999999999999853
Q ss_pred CccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhc
Q 020968 275 ILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 275 ~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~ 309 (319)
+++++++..... ..+.+.+.|.++..++..
T Consensus 249 -----~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 279 (374)
T PRK05839 249 -----SILKKYKAYRTYLGCASPLPLQKAAAVAWLD 279 (374)
T ss_pred -----HHHHHHHHHHhhcCCCCChHHHHHHHHHhcc
Confidence 588888777653 456788899888875543
No 49
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=4.1e-40 Score=305.05 Aligned_cols=281 Identities=22% Similarity=0.249 Sum_probs=214.8
Q ss_pred HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCC--cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHH
Q 020968 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRT--ASVAVDAIVHSVRSARFNCYSSTVGILPARRAI 96 (319)
Q Consensus 19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~--~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 96 (319)
++...+++.++.+...+.+ ...+++|+|+.|.|.. +.+.+ .+.+.+++.+..+......|++..|.++||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~-~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~ai 78 (396)
T PRK09257 4 HLEAAPADPILGLMEAFRA----DPRPDKVNLGVGVYKD-EQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAV 78 (396)
T ss_pred cCCCCCCChHHHHHHHHhh----CCCcCcEecceeeEEC-CCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHH
Confidence 3456667777776654532 2246899999996421 11223 378888888876554555899999999999999
Q ss_pred HHHHhhhCCCCCCCCcE--EEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC
Q 020968 97 ADYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVL--ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172 (319)
Q Consensus 97 a~~~~~~~g~~~~~~~i--~~~~G~t~ai~~~~~~l--~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 172 (319)
++++.+..+..+++++| ++|+|+++|+.++++.+ +++||+|++++|+|+.|...++..|++++.++....+++++|
T Consensus 79 a~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d 158 (396)
T PRK09257 79 QELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLD 158 (396)
T ss_pred HHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccC
Confidence 99997765555678887 99999999999998766 489999999999999999999999999999997444457899
Q ss_pred HHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC-CCCCCCCcccC-CCCCe
Q 020968 173 LDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMGVFG-SIVPV 247 (319)
Q Consensus 173 ~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~~~~~-~~~~v 247 (319)
++.+++.+. .++.++++++||||||.++|.+++++|+++|++++++||+||+|.++.++ +....++..+. ..+++
T Consensus 159 ~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~v 238 (396)
T PRK09257 159 FDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLEL 238 (396)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcE
Confidence 999998875 23456667999999999999999999999999999999999999999875 22233333333 24679
Q ss_pred EEEecCccccCCCcceeeEEEe--eCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968 248 LTLGSISKRWIVPGWRLGWLVT--SDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 248 i~~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
|+++||||.|+++|+|+||+++ +++.. -.+++.+++.... .+..++.+.|.+++.++
T Consensus 239 i~i~SfSK~~~~~GlRiG~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 298 (396)
T PRK09257 239 LVASSFSKNFGLYGERVGALSVVAEDAEE---ADRVLSQLKATIRTNYSNPPAHGAAIVATIL 298 (396)
T ss_pred EEEEEcCCcCccccccceeEEEEeCCHHH---HHHHHHHHHHHhhhhcCCCcHHHHHHHHHHh
Confidence 9999999999999999999985 22110 0023344444333 34556889999888844
No 50
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-39 Score=281.47 Aligned_cols=260 Identities=22% Similarity=0.389 Sum_probs=232.5
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
..+++.|+..| ++|+.+|.+.+|+++.++.+.+ +|+ .+.+++-+++++|+++.++..++++.|++++|...++
T Consensus 24 ~~DvlPmWVAD----MDf~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi 96 (388)
T COG1168 24 NEDVLPMWVAD----MDFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI 96 (388)
T ss_pred CCCcceeeeec----ccCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhH
Confidence 47999999999 5599999999999999988765 777 4678999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc-CCCCCcCCHHHHHhhhccC-ceEEEEcCCCCccccccC
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL-PAKGWEVDLDAVEALADEN-TVALVIINPGNPCGNVYT 201 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~-~~~v~l~~p~nptG~~~~ 201 (319)
..+++++.++||.|++..|.|+++.......|.+++..|+. .++.|.+|.++||+++.+. .+++++||||||||.+++
T Consensus 97 ~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt 176 (388)
T COG1168 97 SLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWT 176 (388)
T ss_pred HHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCcccc
Confidence 99999999999999999999999999999999999999986 4566899999999988764 589999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC--CCeEEEecCccccCCCcceeeEEEeeCCCCCccch
Q 020968 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI--VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (319)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~--~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 279 (319)
.+++++|.++|.+||++||.||+|+++++.|+.+.+..++... ++.|++.|.||+|+++|+++++++.+|+.
T Consensus 177 ~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~------ 250 (388)
T COG1168 177 KEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRE------ 250 (388)
T ss_pred HHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHH------
Confidence 9999999999999999999999999999999887777777654 78999999999999999999999998853
Q ss_pred HHHHHHHHhhh--hcCCcchHHHHHHHHHHhccccccccc
Q 020968 280 GIVDSIKSFLN--ISSDPATFIQFLKSSRKLKRNSFLKSL 317 (319)
Q Consensus 280 ~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~l 317 (319)
++++..+... ...++|.++-.|...++-+++.|++.|
T Consensus 251 -lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L 289 (388)
T COG1168 251 -LRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDEL 289 (388)
T ss_pred -HHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHH
Confidence 5555443332 356789999999999899999998765
No 51
>PLN02231 alanine transaminase
Probab=100.00 E-value=6.7e-39 Score=304.42 Aligned_cols=269 Identities=25% Similarity=0.375 Sum_probs=215.8
Q ss_pred hcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc--C-CCCCCCCCcCCHHHHHHHHH
Q 020968 22 TASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS--A-RFNCYSSTVGILPARRAIAD 98 (319)
Q Consensus 22 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~-~~~~Y~~~~g~~~lr~~ia~ 98 (319)
..+.+-+|+++... ..+++|+|+.+.+. ++ ..+++...+.+.. + ....|++..|.++||+++++
T Consensus 113 ~~~~~~~r~v~~~~-------~~p~~i~~~~~~~~----fp--~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~ 179 (534)
T PLN02231 113 QQPITFFREVLALC-------DHPSLLDKSETHGL----FS--ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAA 179 (534)
T ss_pred CCccHHHHHHHHhc-------cCCccCCCCCcccc----CC--HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHH
Confidence 33444555555433 35789999876544 33 2444445555554 2 35689999999999999999
Q ss_pred HHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC-CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHH
Q 020968 99 YLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR-PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177 (319)
Q Consensus 99 ~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~-~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 177 (319)
++.+.+|..+++++|++|+|+++|+..++++++. +||.|+++.|+|+.|...++..|.+++.++++++++|++|+++|+
T Consensus 180 ~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le 259 (534)
T PLN02231 180 GIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELK 259 (534)
T ss_pred HHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHH
Confidence 9999889999999999999999999999999984 799999999999999999999999999999987778999999999
Q ss_pred hhhcc------CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC-CCCCCCCcccC-------C
Q 020968 178 ALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVPMGVFG-------S 243 (319)
Q Consensus 178 ~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~-~~~~~~~~~~~-------~ 243 (319)
+.+++ ++++++++||+||||.++|.+++++|+++|+++|++||+||+|.++.|+ +..+.++..+. .
T Consensus 260 ~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~ 339 (534)
T PLN02231 260 KQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEK 339 (534)
T ss_pred HHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccC
Confidence 98864 5788999999999999999999999999999999999999999999995 44454554432 1
Q ss_pred CCCeEEEecCcccc-CCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968 244 IVPVLTLGSISKRW-IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 244 ~~~vi~~~s~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 309 (319)
..++|+++|+||.| +++|+|+||+++++. ++++++++.+..+...+++.+.|.++.. +++
T Consensus 340 ~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~-----~~~l~~~l~k~~~~~~~s~~~~Q~~~~~-~l~ 400 (534)
T PLN02231 340 DISLVSFQSVSKGYYGECGKRGGYMEVTGF-----TSDVREQIYKVASVNLCSNISGQILASL-VMS 400 (534)
T ss_pred CceEEEEeccCcccccCCccceEEEEEecC-----CHHHHHHHHHHHhhhcCCChHHHHHHHH-HhC
Confidence 23689999999975 789999999987531 1358888877666444566777877766 443
No 52
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=3e-39 Score=302.57 Aligned_cols=259 Identities=23% Similarity=0.378 Sum_probs=225.2
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc--CC-CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS--AR-FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
.+.+++|+.|.|+. ...+...+.+++.+..+. .. ...|.+..|..+||+++++++...+|+.+++++|++|+|++
T Consensus 88 ~~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q 165 (459)
T COG1167 88 DPSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQ 165 (459)
T ss_pred CCceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHH
Confidence 38899999998763 355667777777776643 22 46888889999999999999997899999999999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEc-CCCCcccc
Q 020968 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVII-NPGNPCGN 198 (319)
Q Consensus 121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~-~p~nptG~ 198 (319)
+|+.++++.++++||+|++++|+|.....+++.+|++++.++++.+ ++|++.+++.++. ++++++++ +.+||||.
T Consensus 166 ~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~---G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~ 242 (459)
T COG1167 166 QALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDED---GIDPEALEEALAQWKPKAVYVTPTFQNPTGV 242 (459)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCC---CCCHHHHHHHHhhcCCcEEEECCCCCCCCCC
Confidence 9999999999999999999999999999999999999999998743 5999999999876 46666544 44899999
Q ss_pred ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccc
Q 020968 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (319)
Q Consensus 199 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 278 (319)
++|.+..++|+++|+++|++||+||.|+++.+++.+.+++..++..++||+++||||+ .+||+|+||+++|.
T Consensus 243 tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~------- 314 (459)
T COG1167 243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP------- 314 (459)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH-------
Confidence 9999999999999999999999999999999998888888999988999999999999 59999999999974
Q ss_pred hHHHHHHHHhhh-hcCCcchHHHHHHHHHHhccccccccc
Q 020968 279 SGIVDSIKSFLN-ISSDPATFIQFLKSSRKLKRNSFLKSL 317 (319)
Q Consensus 279 ~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~l 317 (319)
++++++...+. ...+++.+.|.+++..+. +..|.++|
T Consensus 315 -~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~-~G~~~~hl 352 (459)
T COG1167 315 -ELIEKLLRLKQAADLGPSSLSQAALAAFLL-SGHYDRHL 352 (459)
T ss_pred -HHHHHHHHHHHHhcCCCChHHHHHHHHHHH-cCCHHHHH
Confidence 58888888776 467889999999999555 66676664
No 53
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=6.2e-39 Score=292.50 Aligned_cols=246 Identities=27% Similarity=0.415 Sum_probs=211.9
Q ss_pred eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHHHH
Q 020968 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAIEV 125 (319)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai~~ 125 (319)
+++|+.|+|+ +++++.+.+++++... ....|++..|..+||+++++++.+.+|++++++ +|++|+|+++++..
T Consensus 2 ~~~~~~g~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~ 75 (350)
T TIGR03537 2 LFDFGTGDPK----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH 75 (350)
T ss_pred eEeccCCCCC----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence 6899999986 6778999999988754 356899888999999999999998889889998 99999999999999
Q ss_pred HHHHhcCCC---CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 126 ILTVLARPG---ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 126 ~~~~l~~~g---d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
++.+++++| |+|+++.|+|..|...++..|++++.++.++++++.+|+++++++++++++++++++|+||||.+++.
T Consensus 76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~ 155 (350)
T TIGR03537 76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR 155 (350)
T ss_pred HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence 999999887 69999999999999999999999999998766778899999999988889999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++++|+++|+++|++||+||+|.++.+++ .+.++.... .+++|+++|+||.++++|+|+||++++. .+.
T Consensus 156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~--------~~~ 225 (350)
T TIGR03537 156 SYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDE--------KLI 225 (350)
T ss_pred HHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-cCCEEEEeecccccCCccccceeeecCH--------HHH
Confidence 999999999999999999999999987754 333333333 3689999999999999999999998742 578
Q ss_pred HHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968 283 DSIKSFLNI-SSDPATFIQFLKSSRKL 308 (319)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~q~~~~~~l~ 308 (319)
++++..... ....+.+.|.++..++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~q~~~~~~l~ 252 (350)
T TIGR03537 226 SFLRKLRANFGVASPDFVQAAAKAAWS 252 (350)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHhC
Confidence 888876653 33556678888766454
No 54
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.9e-39 Score=303.17 Aligned_cols=256 Identities=22% Similarity=0.369 Sum_probs=206.2
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc-----------CCCCCCCCCcCCHHHHHHHHHHHhhhCCC--CCCC
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS-----------ARFNCYSSTVGILPARRAIADYLNRDLPY--KLSP 110 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~--~~~~ 110 (319)
+.++|+|+.+++. +.. +.+.+.++..... .....|++..|.++||+++|+++.+.+|. .+++
T Consensus 37 p~g~i~L~~~En~----l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~ 111 (468)
T PLN02450 37 PSGIIQMGLAENQ----LSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP 111 (468)
T ss_pred CCeeEEeehhHhH----hhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh
Confidence 4479999999854 222 5555555443210 12346988889999999999999887664 4689
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccCCCCCcCCHHHHHhhhcc------C
Q 020968 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------N 183 (319)
Q Consensus 111 ~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~ 183 (319)
++|++|+|+++++..++.+++++||.|++++|+|..|...+. ..|++++.++.+.+++|.+|++++++++.+ +
T Consensus 112 ~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~ 191 (468)
T PLN02450 112 NKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLK 191 (468)
T ss_pred HHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999988777 589999999987677889999999987753 6
Q ss_pred ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc---------CCCCCeEEEecCc
Q 020968 184 TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF---------GSIVPVLTLGSIS 254 (319)
Q Consensus 184 ~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---------~~~~~vi~~~s~s 254 (319)
++++++++||||||.+++.+++++|+++|++++++||+||+|+++.|++.++.+.... ...+++++++|||
T Consensus 192 ~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~S 271 (468)
T PLN02450 192 VKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLS 271 (468)
T ss_pred eeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEecc
Confidence 7899999999999999999999999999999999999999999988876544443222 1346899999999
Q ss_pred cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSF 313 (319)
Q Consensus 255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 313 (319)
|.|++||+|+||++++++ .+++.+..... ...++.+.|.+++. +++++.|
T Consensus 272 K~~~l~GlRiG~li~~~~-------~l~~~~~~~~~-~~~~s~~~Q~a~~~-~L~~~~~ 321 (468)
T PLN02450 272 KDLGLPGFRVGAIYSNDE-------MVVSAATKMSS-FGLVSSQTQYLLSA-LLSDKKF 321 (468)
T ss_pred ccCCCCCccEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHH-HhCCchh
Confidence 999999999999998752 24555554433 33578899999988 5555443
No 55
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-39 Score=299.14 Aligned_cols=279 Identities=17% Similarity=0.178 Sum_probs=210.0
Q ss_pred HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (319)
Q Consensus 19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 97 (319)
++....++.++.+.+..+ +...+++++|+.|.| +..+...+.+.+.+++.+........+|++..|.++||++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~----~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia 82 (404)
T PTZ00376 7 QVPLGPPDPILGLAAAFK----ADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQ 82 (404)
T ss_pred cCCcCCCChHHHHHHHHh----hcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHH
Confidence 344566667777766553 223568899999986 321112223445554444333334468999999999999999
Q ss_pred HHHhhhCCCCCCCCcEE--EeCCHHHHHHHHHH---HhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC
Q 020968 98 DYLNRDLPYKLSPDDVY--LTLGCTQAIEVILT---VLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD 172 (319)
Q Consensus 98 ~~~~~~~g~~~~~~~i~--~~~G~t~ai~~~~~---~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 172 (319)
+++.+..+..+++++|+ .|.|+++|+.+++. +++++||+|++++|+|+.|...++..|++++.++..+++++++|
T Consensus 83 ~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d 162 (404)
T PTZ00376 83 KLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLD 162 (404)
T ss_pred HHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcC
Confidence 99976555567888998 48999999988865 66799999999999999999999999999999998555568999
Q ss_pred HHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC--CCCCCcccC-CCCC
Q 020968 173 LDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVPMGVFG-SIVP 246 (319)
Q Consensus 173 ~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~-~~~~ 246 (319)
++.+++.+. ++++++++++||||||.++|.+++++|+++|++++++||+||+|.++.+++. ...++..+. ..++
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 242 (404)
T PTZ00376 163 FDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVE 242 (404)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCc
Confidence 999999884 3356777899999999999999999999999999999999999999998641 122233332 2358
Q ss_pred eEEEecCccccCCCcceeeEEEe--eCCCCCccchHHHH----HHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968 247 VLTLGSISKRWIVPGWRLGWLVT--SDPNGILQDSGIVD----SIKSFLN-ISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 247 vi~~~s~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~q~~~~~~l~ 308 (319)
+|+++||||.|++||+|+||+++ .+ +++++ .++.... .+.+++.++|.+++.++.
T Consensus 243 vi~i~SfSK~~~~~GlRvG~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 304 (404)
T PTZ00376 243 FLVAQSFSKNMGLYGERIGALHIVCAN-------KEEAANVLSQLKLIIRPMYSSPPIHGARIADRILS 304 (404)
T ss_pred EEEEEeCCCcccccccccceEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhC
Confidence 99999999999999999999842 22 23333 3443333 344567899999988553
No 56
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=4.4e-38 Score=291.38 Aligned_cols=250 Identities=18% Similarity=0.332 Sum_probs=211.0
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQA 122 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~a 122 (319)
+.++++|+.|+|+ ..+++.+.+++.+.+.......|++..|.++||+++++++.+.+|..++++ ++++|+|++++
T Consensus 28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~ 103 (395)
T PRK08175 28 GEDIIDFSMGNPD----GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG 103 (395)
T ss_pred CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 6789999999987 455677888887766555567899999999999999999998888888887 79999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc---cCceEEEEcCCCCccccc
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIINPGNPCGNV 199 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~ 199 (319)
++.++..++++||+|++++|+|..+...++..|.+++.++.+.+++ +.++++++++ ++++++++++|+||||.+
T Consensus 104 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~ 180 (395)
T PRK08175 104 LAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQC 180 (395)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCCC
Confidence 9999999999999999999999999888899999999999865433 4777887765 367899999999999999
Q ss_pred cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEeeCCCCCccc
Q 020968 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQD 278 (319)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~ 278 (319)
++.+++++|+++|+++|++||+||+|.++.+++....++..+.. .+++|+++||||.|++||+|+||++++.
T Consensus 181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~------- 253 (395)
T PRK08175 181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP------- 253 (395)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH-------
Confidence 99999999999999999999999999999887655555544432 3568999999999999999999999743
Q ss_pred hHHHHHHHHhhhh-cCCcchHHHHHHHHHHh
Q 020968 279 SGIVDSIKSFLNI-SSDPATFIQFLKSSRKL 308 (319)
Q Consensus 279 ~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~ 308 (319)
++++++.+.... ..+++.+.|.++...+.
T Consensus 254 -~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 283 (395)
T PRK08175 254 -ELVSALARIKSYHDYGTFTPLQVAAIAALE 283 (395)
T ss_pred -HHHHHHHHHHhhcccCCCcHHHHHHHHHHh
Confidence 588888877653 44567788888777553
No 57
>PRK07324 transaminase; Validated
Probab=100.00 E-value=6.2e-39 Score=294.62 Aligned_cols=243 Identities=22% Similarity=0.353 Sum_probs=210.4
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+.++++|+.|+|+ +..++.+ +++.+++..... .|++..|.++||+++++++. .+++++|++|+|+++|
T Consensus 24 ~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~a 92 (373)
T PRK07324 24 AESCIDSLTLEELL----ALAGKNP-EAFYQELGQKKL-TYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATGA 92 (373)
T ss_pred ccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCCc-cCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHHH
Confidence 47889999999987 5667777 777777766544 89998999999999999984 2578999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
+.+++.+++++||+|+++.|+|..+...++..|.+++.++.+.+++|.+|++++++.+.++++++++++||||||.+++.
T Consensus 93 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~ 172 (373)
T PRK07324 93 NFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDR 172 (373)
T ss_pred HHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999999877788899999999888889999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++++|+++|+++|++||+||+|.++.+++. ..++... .+++|+++||||.|+++|+|+||++++. +++
T Consensus 173 ~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~i~~~~--------~li 241 (373)
T PRK07324 173 AYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGWIAANE--------EVI 241 (373)
T ss_pred HHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEEEecCH--------HHH
Confidence 9999999999999999999999999888653 3333332 3578999999999999999999999842 588
Q ss_pred HHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968 283 DSIKSFLNI-SSDPATFIQFLKSSRK 307 (319)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~q~~~~~~l 307 (319)
+++++.+.. ..+++.+.|.++..++
T Consensus 242 ~~~~~~~~~~~~~~~~~~q~~a~~~l 267 (373)
T PRK07324 242 DILRKYRDYTMICAGVFDDMLASLAL 267 (373)
T ss_pred HHHHHHhCcEEecCChHHHHHHHHHH
Confidence 888887763 4567788888877654
No 58
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.8e-39 Score=294.31 Aligned_cols=247 Identities=20% Similarity=0.316 Sum_probs=207.9
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
+..++|+|+.|+++ +++++.+.+++.+.+.. ...|+ +.|.++||+++++++ ++++++|++|+|++++
T Consensus 27 ~~~~~i~l~~nen~----~~~~~~v~~a~~~~~~~--~~~Yp-~~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~ 93 (366)
T PRK01533 27 GDHSFVKLASNENP----FGCSPRVLDELQKSWLD--HALYP-DGGATTLRQTIANKL------HVKMEQVLCGSGLDEV 93 (366)
T ss_pred CCCceEEeCCCCCC----CCCCHHHHHHHHHHHHh--cCcCC-CCCHHHHHHHHHHHh------CCCcceEEECCCHHHH
Confidence 35689999999976 78999999999887654 23564 568899999999998 5689999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
+.+++++++++||+|+++.|+|..|...++..|++++.++.+ ++.+|++.++++++++++++++++||||||.+++.
T Consensus 94 i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~ 170 (366)
T PRK01533 94 IQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVND 170 (366)
T ss_pred HHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCH
Confidence 999999999999999999999999999999999999999874 34699999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++++++++|++++ ++|+||+|.++.+++.....+..+...+++|+++||||.|++||+|+||++++. +++
T Consensus 171 ~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~--------~~~ 241 (366)
T PRK01533 171 RKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE--------ELI 241 (366)
T ss_pred HHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH--------HHH
Confidence 99999999998866 677899999887654322333334455789999999999999999999999853 588
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHhcccccccc
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFLKS 316 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 316 (319)
++++..... ++++.++|.++..++ ++.+|.++
T Consensus 242 ~~l~~~~~~-~~~~~~~q~aa~~~l-~~~~~~~~ 273 (366)
T PRK01533 242 EKLNVVRLP-FNVSSLAQKAATIAF-GDDEFIEE 273 (366)
T ss_pred HHHHHhcCC-CCcCHHHHHHHHHHh-CCHHHHHH
Confidence 888776643 578999999998855 45555543
No 59
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=6.7e-38 Score=295.89 Aligned_cols=259 Identities=20% Similarity=0.353 Sum_probs=204.1
Q ss_pred CCCeEeccCCCCCCCCCCCC-cHHHHHHHHHH------hhc-CCCCCCCCCcCCHHHHHHHHHHHhhhCC--CCCCCCcE
Q 020968 44 TRPLIPLGHGDPSAFPSFRT-ASVAVDAIVHS------VRS-ARFNCYSSTVGILPARRAIADYLNRDLP--YKLSPDDV 113 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~------~~~-~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i 113 (319)
+.++|+|+.++... .++. .+.+.+..... +.. .....|++..|.++||+++|+++++.+| +.+++++|
T Consensus 45 p~g~i~l~~aEN~l--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~I 122 (496)
T PLN02376 45 PHGIIQMGLAENQL--CLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERV 122 (496)
T ss_pred CCceEEeecchhhh--hHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhE
Confidence 34799999997431 0122 33333332221 100 1234688888999999999999998777 66899999
Q ss_pred EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccCCCCCcCCHHHHHhhhc------cCceE
Q 020968 114 YLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALAD------ENTVA 186 (319)
Q Consensus 114 ~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~------~~~~~ 186 (319)
++|+|+++++..++.+++++||.|+++.|+|+.+...+. ..|++++.++++..++|++|++.+++++. .++++
T Consensus 123 vit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~ 202 (496)
T PLN02376 123 VMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKG 202 (496)
T ss_pred EEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeE
Confidence 999999999999999999999999999999999988777 58999999998766778999999976532 36788
Q ss_pred EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC--------CCCeEEEecCccccC
Q 020968 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS--------IVPVLTLGSISKRWI 258 (319)
Q Consensus 187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~--------~~~vi~~~s~sK~~~ 258 (319)
+++++||||||.+++.+++++|+++|+++|++||+||+|.++.|++..+.++..+.. .+++++++||||.|+
T Consensus 203 l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~g 282 (496)
T PLN02376 203 LILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMG 282 (496)
T ss_pred EEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCC
Confidence 999999999999999999999999999999999999999999988766666544421 135778999999999
Q ss_pred CCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968 259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSF 313 (319)
Q Consensus 259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 313 (319)
+||+|+||++++++ .+.+.++.... ...++.+.|.+++. ++.+++|
T Consensus 283 lpGlRvG~li~~~~-------~l~~~~~~~~~-~~~vs~~~Q~a~~~-~L~d~~~ 328 (496)
T PLN02376 283 LPGFRVGIVYSFND-------SVVSCARKMSS-FGLVSSQTQLMLAS-MLSDDQF 328 (496)
T ss_pred CCcceEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHH-HhCChhH
Confidence 99999999998653 35555544333 33578999999988 5556555
No 60
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=7.1e-38 Score=292.57 Aligned_cols=258 Identities=22% Similarity=0.372 Sum_probs=209.8
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhh----------c-CCCCCCCCCcCCHHHHHHHHHHHhhhCC--CCCC
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVR----------S-ARFNCYSSTVGILPARRAIADYLNRDLP--YKLS 109 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~----------~-~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~ 109 (319)
++.++|+|+..+.. -..+.+.+.+++... . .....|.+..|.++||+++|+++++.+| ..++
T Consensus 45 np~g~i~l~~aeN~-----l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~ 119 (447)
T PLN02607 45 NPSGVIQMGLAENQ-----VSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFD 119 (447)
T ss_pred CCCceEEEechhhh-----hhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcC
Confidence 34569999999853 345666666655432 0 1223577888999999999999998776 3589
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccCCCCCcCCHHHHHhhhcc------
Q 020968 110 PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHLEVRHFDLLPAKGWEVDLDAVEALADE------ 182 (319)
Q Consensus 110 ~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------ 182 (319)
+++|++|+|+++++..++.+++++||.|+++.|.|..+...+. ..|+++++++.+..++|.+|++.+++++..
T Consensus 120 p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~ 199 (447)
T PLN02607 120 PDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANI 199 (447)
T ss_pred HHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999987666 579999999987777788999999998763
Q ss_pred CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc----C--C-CCCeEEEecCcc
Q 020968 183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF----G--S-IVPVLTLGSISK 255 (319)
Q Consensus 183 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~--~-~~~vi~~~s~sK 255 (319)
++++++++|||||||.++|.+++++++++|+++++++|+||+|..+.|++.++.++.++ . . .++++++.|+||
T Consensus 200 ~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK 279 (447)
T PLN02607 200 RVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSK 279 (447)
T ss_pred CeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchh
Confidence 67899999999999999999999999999999999999999999988876555555432 1 1 468999999999
Q ss_pred ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
.|+++|+|+||+++.++ ++++.++.... +..+|.+.|.+++. ++.+++|.
T Consensus 280 ~fg~~GlRvG~ivs~n~-------~l~~~~~~~~~-~~~~s~~~q~~~~~-~L~d~~~~ 329 (447)
T PLN02607 280 DLGLPGFRVGTIYSYND-------KVVTTARRMSS-FTLVSSQTQHLLAS-MLSDEEFT 329 (447)
T ss_pred cCCCCcceEEEEEEcCH-------HHHHHHHHHhh-cCCCCHHHHHHHHH-HhCCchhH
Confidence 99999999999998542 46666655433 33568899999998 66665554
No 61
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-38 Score=294.21 Aligned_cols=234 Identities=21% Similarity=0.309 Sum_probs=189.9
Q ss_pred cHHHHHHHHHHHhhhcCCC-------CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHH
Q 020968 27 TVRGVLNSLLENLNKNDTR-------PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADY 99 (319)
Q Consensus 27 ~i~~~~~~~~~~~~~~~~~-------~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 99 (319)
+..+|.+++.+.++++++. ++|+|+.|.|+ +++++.+.++. +.+.. .+|++..|..++|++++++
T Consensus 75 ~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~---~~Y~~~~g~~~lreaia~~ 146 (527)
T PRK09275 75 QKEGIEERFEAFLEEHKDVPGIDFLRDAVSYVRDQLG----FDADEFVYELV-DGIIG---DNYPVPDRMLKHTEKIVKD 146 (527)
T ss_pred ccccHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHHHHHH-HHHhc---CCCCCCCCCHHHHHHHHHH
Confidence 3446777888888777553 37999999987 78888888855 44433 2599999999999999995
Q ss_pred Hhh-hCCCCC-C--CCcEEEeCCHHHHHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHhhCCC--eEEEEeccCCCC
Q 020968 100 LNR-DLPYKL-S--PDDVYLTLGCTQAIEVILTV-----LARPGANILLPRPGFPYYEARATHSHL--EVRHFDLLPAKG 168 (319)
Q Consensus 100 ~~~-~~g~~~-~--~~~i~~~~G~t~ai~~~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~g~--~~~~~~~~~~~~ 168 (319)
+.+ ..+... . .++|++|+|+++|+..++.+ ++++||+|++++|+|+.|...++..|. +++.++.+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~ 226 (527)
T PRK09275 147 YLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENE 226 (527)
T ss_pred HHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccC
Confidence 543 333222 2 34899999999999999886 689999999999999999998887755 455555555677
Q ss_pred CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH--cCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968 169 WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK--LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (319)
Q Consensus 169 ~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~ 246 (319)
|.+|+++++++++++++++++++||||||.+++.+++++|+++|++ ++++||+||+|.++.+. +.++... ..++
T Consensus 227 f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~-~~~~ 302 (527)
T PRK09275 227 WQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV-LPYN 302 (527)
T ss_pred CCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh-CCCC
Confidence 9999999999988899999999999999999999999999999965 59999999999998742 2333332 2368
Q ss_pred eEEEecCccccCCCcceeeEEEeeCC
Q 020968 247 VLTLGSISKRWIVPGWRLGWLVTSDP 272 (319)
Q Consensus 247 vi~~~s~sK~~~~~G~r~G~i~~~~~ 272 (319)
+|+++||||.|+++|||+||++++++
T Consensus 303 ~I~v~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 303 TILVYSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred EEEEeehhhhccCcHhHHhhhhcCch
Confidence 99999999999999999999998764
No 62
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.4e-38 Score=288.19 Aligned_cols=249 Identities=19% Similarity=0.289 Sum_probs=205.5
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-CCCCCCCcCCHHHHHHHHHHHhhhC--CCCCCCCcEEEeCCHHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYSSTVGILPARRAIADYLNRDL--PYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~--g~~~~~~~i~~~~G~t~ 121 (319)
+.+++|+.|+|+ +++++.+.+++.+.+.... ...|++ .|..+||+++++++++.+ |..+++++|++|+|+++
T Consensus 28 ~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~ 102 (374)
T PRK02610 28 IQLDRLDTNEFP----YDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDE 102 (374)
T ss_pred cceeEecCCCCC----CCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHH
Confidence 358999999986 7899999999998776542 356864 699999999999998765 56789999999999999
Q ss_pred HHHHHHHHhcCCCC-EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcCCCCcc
Q 020968 122 AIEVILTVLARPGA-NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINPGNPC 196 (319)
Q Consensus 122 ai~~~~~~l~~~gd-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p~npt 196 (319)
++..++.+++.+|| +|+++.|+|..|...++..|++++.++.+ .++|++|+++++++++ .+++++++++|||||
T Consensus 103 al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPT 181 (374)
T PRK02610 103 LIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPT 181 (374)
T ss_pred HHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCC
Confidence 99988888877885 89999999999999999999999999874 3458999999999876 478999999999999
Q ss_pred ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCc
Q 020968 197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGIL 276 (319)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~ 276 (319)
|.+++.+++++++++| ++++||+||+|.+|.+.. .+..+...+++|+++||||+|++||+|+||++++.
T Consensus 182 G~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~----~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~----- 250 (374)
T PRK02610 182 GNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT----LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP----- 250 (374)
T ss_pred CCCCCHHHHHHHHhcc--CCcEEEEeccccccCccc----hHHHHhcCCCEEEEEecchhccCcccceeeeecCH-----
Confidence 9999999999999887 389999999999986421 22233344678999999999999999999999853
Q ss_pred cchHHHHHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968 277 QDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
++++++...+.. ++.+.+.|.++..++.+.+.+.
T Consensus 251 ---~l~~~l~~~~~~-~~~~~~~q~a~~~~l~~~~~~~ 284 (374)
T PRK02610 251 ---ELIAVLEKVRLP-YNLPSFSQLAAQLALEHRQELL 284 (374)
T ss_pred ---HHHHHHHHhcCC-CCCCHHHHHHHHHHhcCHHHHH
Confidence 588888776543 4568899998887554333333
No 63
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=6.9e-37 Score=283.97 Aligned_cols=246 Identities=18% Similarity=0.272 Sum_probs=197.3
Q ss_pred cCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC----CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (319)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~ 117 (319)
..+.++++|+.|+|. +++++.+.+++.+.+.+. ....|++..|.++||+++++++.+. .+++++|++|+
T Consensus 30 ~~~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~ 102 (402)
T TIGR03542 30 HPSADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISD 102 (402)
T ss_pred cCCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECC
Confidence 356789999999976 678899999998877642 2357988899999999999986432 37889999999
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCC-----------eEEEEeccCCCCCcCCHHHHHhhhccCceE
Q 020968 118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHL-----------EVRHFDLLPAKGWEVDLDAVEALADENTVA 186 (319)
Q Consensus 118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 186 (319)
|+++++..++ .++.+||+|++++|+|..|...++..|+ +++.++.+.++++.+|.+. .+++++
T Consensus 103 Ga~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~ 176 (402)
T TIGR03542 103 GAKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDI 176 (402)
T ss_pred CcHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceE
Confidence 9999999864 5568999999999999999999999999 8888887655566666432 146789
Q ss_pred EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceee
Q 020968 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLG 265 (319)
Q Consensus 187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G 265 (319)
+++++||||||.++|.+++++|+++|++++++||+||+|.++.+++..+.++..+.. .+++|+++||||.|++||+|+|
T Consensus 177 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG 256 (402)
T TIGR03542 177 IYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLG 256 (402)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceE
Confidence 999999999999999999999999999999999999999999876543444444443 3578999999999999999999
Q ss_pred EEEeeCCCCCccchHHH--------HHHHHhh-hhcCCcchHHHHHHHHHHh
Q 020968 266 WLVTSDPNGILQDSGIV--------DSIKSFL-NISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 266 ~i~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~q~~~~~~l~ 308 (319)
|++++. +++ +.+.... ....+++.+.|.+++.++.
T Consensus 257 ~~i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~ 300 (402)
T TIGR03542 257 WTVVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYA 300 (402)
T ss_pred EEEecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHc
Confidence 999864 233 2222222 2334578899998777443
No 64
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-36 Score=278.47 Aligned_cols=273 Identities=21% Similarity=0.296 Sum_probs=217.4
Q ss_pred cHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCcCCHHHHHHHHHHHhhhC
Q 020968 27 TVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDL 104 (319)
Q Consensus 27 ~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~ 104 (319)
.++.+++......++.+.+++++|+.|+|+ +++++.+.+++.+..... ....|++..|.+++|+++++++.+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~ 90 (394)
T PRK06836 15 WIRKMFEEGARLKAEYGADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRF 90 (394)
T ss_pred HHHHHHHHHHHHHhhcCCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHh
Confidence 355555443322222345788999999876 567899999998776542 24689888999999999999999888
Q ss_pred CCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc
Q 020968 105 PYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT 184 (319)
Q Consensus 105 g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 184 (319)
+..+++++|++|+|++++++.++.+++++||.|++++|+|..+...++..|++++.++.+++ ++++|++++++++++++
T Consensus 91 ~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~ 169 (394)
T PRK06836 91 GTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPKT 169 (394)
T ss_pred CCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcCc
Confidence 88889999999999999999999999999999999999999999999999999999998643 47899999999998889
Q ss_pred eEEEEcCCCCccccccCHHHHHHHHHHHHH------cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC
Q 020968 185 VALVIINPGNPCGNVYTYQHLQKIAETAKK------LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI 258 (319)
Q Consensus 185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~ 258 (319)
+++++++|+||||.+++.+++++|+++|++ +|++||+|++|.++.+++.....+.. ..+++++++||||.|+
T Consensus 170 ~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~ 247 (394)
T PRK06836 170 KAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYDNSIVVYSFSKSLS 247 (394)
T ss_pred eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccCcEEEEecchhhcc
Confidence 999999999999999999999999999999 89999999999999887644333322 2457999999999999
Q ss_pred CCcceeeEEEeeCCCCCccchHHHHHHHHhhhh--cCCcchHHHHHHHHHHh
Q 020968 259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI--SSDPATFIQFLKSSRKL 308 (319)
Q Consensus 259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~ 308 (319)
+||+|+||++++++. .....++..+...... ...++.+.|.+++..+.
T Consensus 248 ~pGlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 297 (394)
T PRK06836 248 LPGERIGYIAVNPEM--EDADDLVAALVFANRILGFVNAPALMQRVVAKCLD 297 (394)
T ss_pred CcceeeEEEecCHHH--hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC
Confidence 999999999986421 0000112222222221 23568889999888543
No 65
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.2e-37 Score=282.55 Aligned_cols=239 Identities=20% Similarity=0.326 Sum_probs=201.2
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~ 124 (319)
.++++|+.|.+. .++++.+.+++.+.+.. ...|++ .+.++||+++++++ ++++++|++|+|+++++.
T Consensus 19 ~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l~ 85 (354)
T PRK06358 19 NMILDFSANINP----LGVPESLKQAITENLDK--LVEYPD-PDYLELRKRIASFE------QLDLENVILGNGATELIF 85 (354)
T ss_pred cceEEecCCCCC----CCCCHHHHHHHHHHHHh--hhcCCC-ccHHHHHHHHHHHh------CCChhhEEECCCHHHHHH
Confidence 458999999865 46689999999887643 457865 46899999999998 578999999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (319)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 204 (319)
.+++++ .+ +.|+++.|+|..|...++..|++++.++.+.+++|.+| +++.+.+..+++++++++||||||.+++.++
T Consensus 86 ~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~ 162 (354)
T PRK06358 86 NIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEE 162 (354)
T ss_pred HHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHH
Confidence 999987 34 68999999999999999999999999998766778899 6666666667899999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH
Q 020968 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (319)
Q Consensus 205 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 284 (319)
+++|+++|++++++||+||+|.+|.+++.....+..+...+++|+++||||.|++||+|+||++++++ .++++
T Consensus 163 ~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~-------~~~~~ 235 (354)
T PRK06358 163 MKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNK-------NLAEK 235 (354)
T ss_pred HHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCH-------HHHHH
Confidence 99999999999999999999999998764433344455567899999999999999999999998643 36777
Q ss_pred HHHhhhhcCCcchHHHHHHHHHH
Q 020968 285 IKSFLNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 285 ~~~~~~~~~~~~~~~q~~~~~~l 307 (319)
+...... ..++.+.|.++..++
T Consensus 236 ~~~~~~~-~~~~~~~q~~~~~~l 257 (354)
T PRK06358 236 LLQMREP-WSINTFADLAGQTLL 257 (354)
T ss_pred HHHhCCC-CcchHHHHHHHHHHh
Confidence 7766553 466888999888855
No 66
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=6.9e-37 Score=280.53 Aligned_cols=261 Identities=22% Similarity=0.315 Sum_probs=205.4
Q ss_pred chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (319)
Q Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 95 (319)
+|.++.......+..... .. ...+.++++|+.|+|. .+.++.+.+++.+... ..+|++..|.++||++
T Consensus 3 ~~~~~~~~~~~~~~~~~~----~~-~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ 70 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKA----TA-AAHPDGIVDLSVGTPV----DPVPPVIQEALAAAAD---APGYPTTAGTPELREA 70 (364)
T ss_pred ccccCCCccHHHHHHHHH----HH-HhcCCCEEEcCCCCCC----CCCCHHHHHHHHHHHh---hCCCCCccCCHHHHHH
Confidence 455555554333333221 11 2245679999999976 4667888888876543 2479988899999999
Q ss_pred HHHHHhhhCCCC-CCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968 96 IADYLNRDLPYK-LSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (319)
Q Consensus 96 ia~~~~~~~g~~-~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (319)
+++++.+.+|.. +++++|++|+|+++++..++..+ +++||.|++++|+|..+...++..|+++..++ ++
T Consensus 71 ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~---------~~ 141 (364)
T PRK07865 71 IVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD---------SL 141 (364)
T ss_pred HHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC---------Ch
Confidence 999999988886 89999999999999999988888 79999999999999999999999999988764 12
Q ss_pred HHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc---CCCCCeEEE
Q 020968 174 DAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF---GSIVPVLTL 250 (319)
Q Consensus 174 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~~~vi~~ 250 (319)
++++ ..+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++.....+... ...+++|++
T Consensus 142 ~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 218 (364)
T PRK07865 142 TELG---PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAV 218 (364)
T ss_pred hhCC---cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEE
Confidence 2222 2467899999999999999999999999999999999999999999988865322222111 133689999
Q ss_pred ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 308 (319)
+||||.|++||+|+||+++++ +++++++..+. ....++.+.|.++..++.
T Consensus 219 ~S~SK~~~~~GlRiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 269 (364)
T PRK07865 219 HSLSKQSNLAGYRAGFVAGDP--------ALVAELLEVRKHAGMMVPAPVQAAMVAALG 269 (364)
T ss_pred eechhccCCCceeeEEEecCH--------HHHHHHHHHHHhcCCCcCHHHHHHHHHHhC
Confidence 999999999999999999753 57888877654 345678899999888553
No 67
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=4.4e-37 Score=287.72 Aligned_cols=244 Identities=17% Similarity=0.188 Sum_probs=200.6
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~ 124 (319)
..+++|+.|.|+ .+++|.+.+++.+.... ...|++..|.++||+++++++.+..+ .+++|++|+|+++++.
T Consensus 85 ~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~ 155 (431)
T PRK15481 85 TPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIE 155 (431)
T ss_pred chhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHH
Confidence 356889989876 45556777777765433 34799989999999999999875322 3569999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEc-CCCCccccccCHH
Q 020968 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVII-NPGNPCGNVYTYQ 203 (319)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~-~p~nptG~~~~~~ 203 (319)
.++++++++||.|++++|+|..|...++..|++++.++.+.+ ++|++.+++++++++++++++ +||||||.+++.+
T Consensus 156 ~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~ 232 (431)
T PRK15481 156 RLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSAR 232 (431)
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHH
Confidence 999999999999999999999999999999999999998532 489999999887788888887 9999999999999
Q ss_pred HHHHHHHHHHHc-CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 204 HLQKIAETAKKL-GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 204 ~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
++++|+++|+++ +++||+||+|.++.+++. .+.... ..+++|+++||||.|+ ||+|+||++++. +++
T Consensus 233 ~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~--~~~~~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~--------~~~ 300 (431)
T PRK15481 233 RAAALRNLLARYPQVLVIIDDHFALLSSSPY--HSVIPQ-TTQRWALIRSVSKALG-PDLRLAFVASDS--------ATS 300 (431)
T ss_pred HHHHHHHHHHhcCCceEEecCchhhhccCCC--CCCCcC-CCCCEEEEeeeccccC-CCceeEEEeCCH--------HHH
Confidence 999999999999 999999999999986542 222222 2368999999999998 999999999853 577
Q ss_pred HHHHHhhhh-cCCcchHHHHHHHHHHhccccc
Q 020968 283 DSIKSFLNI-SSDPATFIQFLKSSRKLKRNSF 313 (319)
Q Consensus 283 ~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~ 313 (319)
+++...... ..+++.+.|.+++.++ ++.+|
T Consensus 301 ~~~~~~~~~~~~~~s~~~q~a~~~~l-~~~~~ 331 (431)
T PRK15481 301 ARLRLRLNSGTQWVSHLLQDLVYACL-TDPEY 331 (431)
T ss_pred HHHHHHHhccccCCCHHHHHHHHHHH-hCccH
Confidence 877765543 3467999999999954 44444
No 68
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=1.3e-37 Score=285.20 Aligned_cols=257 Identities=28% Similarity=0.507 Sum_probs=216.9
Q ss_pred CeEeccCCCCCCCCCCCCcHHHHHHHHH-HhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEEeCCHHHHH
Q 020968 46 PLIPLGHGDPSAFPSFRTASVAVDAIVH-SVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYLTLGCTQAI 123 (319)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~~~G~t~ai 123 (319)
++|+|+.|++......++++.+.+++.+ .........|++..|.++||+++++++++..|..++++ +|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 6899999998743223366667777665 34445567999999999999999999997778888899 999999999999
Q ss_pred HHHHHHh-cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCcc
Q 020968 124 EVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPC 196 (319)
Q Consensus 124 ~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~npt 196 (319)
..++..+ .++|++|+++.|+|+.+...++..|++++.+++...+++.+|++.+++.+++ +++++++++|+|||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999 7899999999999999999999999999999987778899999999999876 56899999999999
Q ss_pred ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC-CcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCC
Q 020968 197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI 275 (319)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~ 275 (319)
|.+++.+++++|+++|+++|++||+||+|+++.++.....+ ...+....++|+++|+||.|+++|+|+||++++.
T Consensus 162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~---- 237 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP---- 237 (363)
T ss_dssp TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH----
T ss_pred ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchh----
Confidence 99999999999999999999999999999999987653333 3445566679999999999999999999999953
Q ss_pred ccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhccc
Q 020968 276 LQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRN 311 (319)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 311 (319)
++++.++.....+.. +.+.|.+++.++....
T Consensus 238 ----~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~ 268 (363)
T PF00155_consen 238 ----ELIERLRRFQRSGLS-SSPMQAAAAAALSDPE 268 (363)
T ss_dssp ----HHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHH
T ss_pred ----hhhhhhhhccccccc-cchhhHHHHHhhhccc
Confidence 588888887775444 8888888888665443
No 69
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-37 Score=281.69 Aligned_cols=238 Identities=23% Similarity=0.364 Sum_probs=200.3
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+.++++|+.|+++ +++++.+.+++.+.+.. ...|++ .|.++||+++++++ ++++++|++|+|+++++
T Consensus 29 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al 95 (357)
T PRK14809 29 PDDLVKLSSNENP----HGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGAL 95 (357)
T ss_pred ccceeEecCCCCC----CCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 5689999999876 67888999999887653 457864 68899999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
..++++++++||.|++++|+|..|...+...|.+++.++.+.++++.++.+.+++.. ++++++++++||||||.++|.+
T Consensus 96 ~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~ 174 (357)
T PRK14809 96 DYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLD 174 (357)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHH
Confidence 999999999999999999999988888899999999998866567888888887765 3578999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 283 (319)
++++|+++|++ +++||+||+|.++.+++ ..+......+++++++||||.|++||+|+||+++++ ++++
T Consensus 175 ~~~~l~~~~~~-~~~iI~De~y~~~~~~~---~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--------~~~~ 242 (357)
T PRK14809 175 EVEALAERTDE-ETLVVVDEAYGEFAERP---SAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--------EWAD 242 (357)
T ss_pred HHHHHHHhCcc-CcEEEEechhhhccCCc---hhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--------HHHH
Confidence 99999999975 78999999999988643 122233445789999999999999999999999864 5788
Q ss_pred HHHHhhhhcCCcchHHHHHHHHHHh
Q 020968 284 SIKSFLNISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 284 ~~~~~~~~~~~~~~~~q~~~~~~l~ 308 (319)
++++.... ..++.++|.++..++.
T Consensus 243 ~~~~~~~~-~~~~~~~~~~a~~~l~ 266 (357)
T PRK14809 243 AYARVNTP-FAASELACRAGLAALD 266 (357)
T ss_pred HHHHhCCC-CCCCHHHHHHHHHHhC
Confidence 88776543 4568888888877553
No 70
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-37 Score=283.14 Aligned_cols=245 Identities=20% Similarity=0.305 Sum_probs=206.0
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
..++++|+.|++. +++++.+.+++.+.+.. . .|.+..|.+++|+++++++ ++++++|++|+|+++++
T Consensus 28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 94 (359)
T PRK03158 28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI 94 (359)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence 4589999999976 56788999999887653 2 4556679999999999998 45789999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
..++++++++||+|++++|+|..+...+...|.++..++.+ ++++|++.+++.++++++++++++|+||||.+++.+
T Consensus 95 ~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~ 171 (359)
T PRK03158 95 QMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE 171 (359)
T ss_pred HHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999985 357899999998888889999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 283 (319)
++.++++.|+ +|++||+||+|.++.+++..+..+......+++|+++||||.|++||+|+||++++. ++++
T Consensus 172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~ 242 (359)
T PRK03158 172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE--------ELIE 242 (359)
T ss_pred HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH--------HHHH
Confidence 9999988874 699999999999988765433333444455789999999999999999999999853 5788
Q ss_pred HHHHhhhhcCCcchHHHHHHHHHHhccccccc
Q 020968 284 SIKSFLNISSDPATFIQFLKSSRKLKRNSFLK 315 (319)
Q Consensus 284 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 315 (319)
+++..... .+++.++|.+++.++ ++.+|.+
T Consensus 243 ~~~~~~~~-~~~~~~~q~~~~~~l-~~~~~~~ 272 (359)
T PRK03158 243 KLNIARPP-FNTTRIAQYAAIAAL-EDQAFLK 272 (359)
T ss_pred HHHHhcCC-CCCCHHHHHHHHHHh-cCHHHHH
Confidence 88776654 467999999999855 4444443
No 71
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.1e-36 Score=283.70 Aligned_cols=281 Identities=17% Similarity=0.167 Sum_probs=196.6
Q ss_pred HHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCC-CCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHH
Q 020968 20 LKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGD-PSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIAD 98 (319)
Q Consensus 20 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 98 (319)
+.....++|+.+.+... ....+..++|+.|+ |+........+.+.+++...+......+|++..|.++||+++++
T Consensus 27 ~~~~~~~~i~~~~~~~~----~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~ 102 (423)
T PLN02397 27 VEPAPPDPILGVTEAFL----ADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAK 102 (423)
T ss_pred CCcCCCChHHHHHHHHh----hCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHH
Confidence 34455556666555443 33567789999996 55211112234566665544433444589999999999999999
Q ss_pred HHhhhCCCCCCCCcE-----EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCH
Q 020968 99 YLNRDLPYKLSPDDV-----YLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDL 173 (319)
Q Consensus 99 ~~~~~~g~~~~~~~i-----~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 173 (319)
++.+..+...+.++| +.++|+. ++...+..++.+||+|++++|+|+.|...++..|++++.++....+++++|+
T Consensus 103 ~~~~~~~~~~~~~~i~~~~i~~g~Ga~-~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~ 181 (423)
T PLN02397 103 LAYGADSPAIKENRVATVQCLSGTGSL-RLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDF 181 (423)
T ss_pred HHcCCCCchhhcCeeEeeecccchHHH-HHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCH
Confidence 996543323333343 3333333 3444444555699999999999999999999999999999875444588999
Q ss_pred HHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC--CCCCCcccC-CCCCe
Q 020968 174 DAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVPMGVFG-SIVPV 247 (319)
Q Consensus 174 ~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~-~~~~v 247 (319)
+.+++.+. ++++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+. ..+++
T Consensus 182 ~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v 261 (423)
T PLN02397 182 DGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEI 261 (423)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcE
Confidence 98887765 4567888899999999999999999999999999999999999999998651 222333332 23579
Q ss_pred EEEecCccccCCCcceeeEEE--eeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHHh
Q 020968 248 LTLGSISKRWIVPGWRLGWLV--TSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 248 i~~~s~sK~~~~~G~r~G~i~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~ 308 (319)
|+++||||+|+++|||+||++ ++++.. -..+.+.++.... ...+++.+.|.+++.++.
T Consensus 262 I~~~SfSK~~~~~G~RvG~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~ 322 (423)
T PLN02397 262 LVAQSYAKNMGLYGERVGALSVVCKSADV---AVRVKSQLKLIARPMYSNPPIHGASIVATILG 322 (423)
T ss_pred EEEEECcccCCCccccceEEEEEeCCHHH---HHHHHHHHHHHHhcccCCCcHHHHHHHHHHhC
Confidence 999999999999999999996 322110 0012333444433 344578889988888553
No 72
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-37 Score=281.79 Aligned_cols=248 Identities=20% Similarity=0.312 Sum_probs=206.1
Q ss_pred CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc--CCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS--ARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
..++|+.|+++ +++++.+.+++.+.+.. .....|++ .|.++||+++++++++.+|.++++++|++|+|+++++
T Consensus 27 ~~i~l~~~~~~----~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l 101 (368)
T PRK03317 27 VPVRLNTNENP----YPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL 101 (368)
T ss_pred ceeEecCCCCC----CCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence 57999999976 78999999999987653 23457864 5889999999999999889899999999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccCH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~ 202 (319)
.+++++++++||.|+++.|+|..|...++..|.+++.++. .++|++|++++++++. .+++++++++|+||||.+++.
T Consensus 102 ~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~ 179 (368)
T PRK03317 102 QQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL 179 (368)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999999998887765 3467899999999886 467889999999999999998
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++++++++| ++++|+||+|.++.+++.. .........+++|+++||||.|+++|+|+||++++. +++
T Consensus 180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~--------~~~ 247 (368)
T PRK03317 180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP--------AVV 247 (368)
T ss_pred HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH--------HHH
Confidence 8888888877 6999999999998765532 222222334589999999999999999999999853 578
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSF 313 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 313 (319)
+.++.... ...++++.|.++..++...+.+
T Consensus 248 ~~l~~~~~-~~~~s~~~~~a~~~~l~~~~~~ 277 (368)
T PRK03317 248 DALRLVRL-PYHLSAVTQAAARAALRHADEL 277 (368)
T ss_pred HHHHhcCC-CCCCCHHHHHHHHHHhhCHHHH
Confidence 88876553 3467889999888755433333
No 73
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=5.7e-36 Score=280.76 Aligned_cols=234 Identities=22% Similarity=0.326 Sum_probs=184.4
Q ss_pred cHHHHHHHHHHHhhhcCCC-------CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH-H
Q 020968 27 TVRGVLNSLLENLNKNDTR-------PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA-D 98 (319)
Q Consensus 27 ~i~~~~~~~~~~~~~~~~~-------~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia-~ 98 (319)
+-.+|.+++.+.++++++. ++|+|+.|+|+ +++++.+ .++.+.+..+ +|++..|..+++++++ +
T Consensus 69 ~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~~-~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~ 140 (521)
T TIGR03801 69 QKEGIEERFETFLAENKSQPGAEFLRDIISYVIDQLG----FDPDAFL-YEMCDGIIGD---NYPVPDRMLPHSEKIVHQ 140 (521)
T ss_pred CcchHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHH-HHHHHHhhcC---CCCCCCCCHHHHHHHHHH
Confidence 3446777777777666443 37999999987 5655555 5555554332 5876667777777766 5
Q ss_pred HHhhhCCCCC-CCC--cEEEeCCHHHHHHHHHHH-----hcCCCCEEEEcCCCCcchHHHHhhC--CCeEEEEeccCCCC
Q 020968 99 YLNRDLPYKL-SPD--DVYLTLGCTQAIEVILTV-----LARPGANILLPRPGFPYYEARATHS--HLEVRHFDLLPAKG 168 (319)
Q Consensus 99 ~~~~~~g~~~-~~~--~i~~~~G~t~ai~~~~~~-----l~~~gd~Vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~ 168 (319)
|+.+.++... ..+ +|++|+|+++|+..++.+ ++++||+|+++.|+|+.|...++.. |.+++.++.++.++
T Consensus 141 y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~ 220 (521)
T TIGR03801 141 YLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTE 220 (521)
T ss_pred HHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccc
Confidence 6666544333 333 899999999999999887 6899999999999999999887765 66777777654333
Q ss_pred -----CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc--CCEEEEeCCCCCccCCCCCCCCCccc
Q 020968 169 -----WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVF 241 (319)
Q Consensus 169 -----~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~ 241 (319)
|.+|.++++++++++++++++++||||||.+++.+++++|+++|+++ +++||+||+|++|.++ +.++...
T Consensus 221 ~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~sl~~~ 297 (521)
T TIGR03801 221 DGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FRSLFAE 297 (521)
T ss_pred cccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---ccchhhh
Confidence 89999999998888899999999999999999999999999999986 9999999999998752 2333333
Q ss_pred CCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968 242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (319)
Q Consensus 242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~ 272 (319)
. .+++|+++||||.|+++|||+||++++++
T Consensus 298 ~-~~~vI~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 298 L-PYNTIGVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred C-CCCEEEEEcchhhccCchhhhhhhhcCch
Confidence 2 35899999999999999999999998753
No 74
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-36 Score=278.89 Aligned_cols=244 Identities=23% Similarity=0.327 Sum_probs=201.5
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
..+++|+|+.|.+. +.+++.+.+++.+.... ..+|++..| .+||+++++++ ++++++|++|+|++++
T Consensus 34 ~~~~~i~l~~~~~~----~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~ 100 (371)
T PRK05166 34 GVPRIAKLGSNENP----LGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDL 100 (371)
T ss_pred CCcceEEcCCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 46689999999876 56788999998875433 457988777 59999999998 4578899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
+..++.+++++||.|+++.|+|..+...++..|++++.++.+. ++++|++++++.++++++++++++|+||||.+++.
T Consensus 101 l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~ 178 (371)
T PRK05166 101 IAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTA 178 (371)
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999998753 46799999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 281 (319)
+++++|+++|++ +++||+||+|.++.+++..+..+..+. ..+++|+++||||.|++||+|+||++++++ ++
T Consensus 179 ~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~-------~l 250 (371)
T PRK05166 179 DQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP-------EL 250 (371)
T ss_pred HHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCH-------HH
Confidence 999999999875 889999999999986543222222222 235799999999999999999999887542 47
Q ss_pred HHHHHHhhhhcCCcchHHHHHHHHHHhcc
Q 020968 282 VDSIKSFLNISSDPATFIQFLKSSRKLKR 310 (319)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 310 (319)
++.+++.... .+++.+.|.++..++...
T Consensus 251 ~~~~~~~~~~-~~~~~~~q~~~~~~l~~~ 278 (371)
T PRK05166 251 VGLLDRVRTP-FNVNGAAQAAALAALDDE 278 (371)
T ss_pred HHHHHHhccC-CCCCHHHHHHHHHHhcCH
Confidence 7777665543 457889998777755443
No 75
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.8e-35 Score=270.31 Aligned_cols=252 Identities=22% Similarity=0.317 Sum_probs=201.8
Q ss_pred cHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCC
Q 020968 27 TVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPY 106 (319)
Q Consensus 27 ~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~ 106 (319)
.+..+.....+. + .++.++++|+.|+|. +++++.+.+++.+... ...|++..|.++||+++++++++.+|.
T Consensus 5 ~~~~~~~~~~~~-~-~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~ 75 (357)
T TIGR03539 5 PWDSLAPYKAKA-A-SHPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGV 75 (357)
T ss_pred hHHHHHHHHHHh-h-hCCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCC
Confidence 345555433332 2 246789999999976 5668888888876543 357998899999999999999998888
Q ss_pred C-CCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc
Q 020968 107 K-LSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT 184 (319)
Q Consensus 107 ~-~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 184 (319)
. +++++|++|+|+++++..++..+ +++||.|++++|+|..+...++..|++++.++ +++.++ .+++
T Consensus 76 ~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~~ 143 (357)
T TIGR03539 76 PGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVGP 143 (357)
T ss_pred CCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccCc
Confidence 6 99999999999999999999888 79999999999999999988899999887663 222222 2467
Q ss_pred eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc---CCCCCeEEEecCccccCCCc
Q 020968 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF---GSIVPVLTLGSISKRWIVPG 261 (319)
Q Consensus 185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~~~vi~~~s~sK~~~~~G 261 (319)
+++++++|+||||.++|.+++++|+++|+++|++||+||+|.++.+++.....+... ...+++|+++||||.|+++|
T Consensus 144 ~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G 223 (357)
T TIGR03539 144 DLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAG 223 (357)
T ss_pred cEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCc
Confidence 899999999999999999999999999999999999999999988765322222110 12357999999999999999
Q ss_pred ceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968 262 WRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK 307 (319)
Q Consensus 262 ~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l 307 (319)
+|+||++++. +++++++..+.. ..+++.+.|.++..++
T Consensus 224 ~R~G~~i~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 262 (357)
T TIGR03539 224 YRAGFVAGDP--------ALVAELLTVRKHAGLMVPAPVQAAMVAAL 262 (357)
T ss_pred eeEEEEecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHc
Confidence 9999999753 577777766653 4567889999988754
No 76
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-35 Score=273.93 Aligned_cols=248 Identities=21% Similarity=0.335 Sum_probs=208.7
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+.++|+|+.|++. +++++.+.+++.+.+.......|++..|.+++|+++++++ ++++++|++|+|+++++
T Consensus 27 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~al 96 (380)
T PRK06225 27 DKEMIWMGQNTNH----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATESL 96 (380)
T ss_pred cCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHHH
Confidence 5689999999876 6888999999999887655667988889999999999998 45788999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC-CCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
..++++++.+||+|++++|+|..+...++..|.+++.++++. ++++.+|++.+++.+.++++++++++|+||||.+++.
T Consensus 97 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 176 (380)
T PRK06225 97 YLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE 176 (380)
T ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence 999999999999999999999999888999999999998743 3467899999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++++|+++|+++|+++|+||+|.+|..+. . +...+. .++++++.||||.|+++|+|+||+++++ +++
T Consensus 177 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~--~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~--------~l~ 244 (380)
T PRK06225 177 EEIKEFAEIARDNDAFLLHDCTYRDFAREH-T--LAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATP--------DLI 244 (380)
T ss_pred HHHHHHHHHHHHCCcEEEEehhHHHHhccC-C--chhhcC-CCCEEEEeechhhcCCccceeEEEecCH--------HHH
Confidence 999999999999999999999998875432 1 222222 3678999999999999999999999853 577
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSF 313 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 313 (319)
++++.......+.+.++|.++...+.....|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~ 275 (380)
T PRK06225 245 EVVKSIVINDLGTNVIAQEAAIAGLKVKDEW 275 (380)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHhcchHH
Confidence 7777765444567888888877655443344
No 77
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.4e-35 Score=276.47 Aligned_cols=256 Identities=23% Similarity=0.319 Sum_probs=196.0
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC----CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA----RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
..+++|+|+.|+|+.. ..+.+.+.+++.+.+... ....|++..|.++||+++++++++.+|..+++++|++|+|
T Consensus 28 ~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~G 105 (416)
T PRK09440 28 RTPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNG 105 (416)
T ss_pred cCCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccC
Confidence 3478899999998731 123456777777765542 2357999999999999999999988899999999999999
Q ss_pred HHHHHHHHHHHhcC-----CCCEEEE-cCCCCcchHHHHhhCCC----eEEEEeccCCC-CCcCCHHHHHhhhccCceEE
Q 020968 119 CTQAIEVILTVLAR-----PGANILL-PRPGFPYYEARATHSHL----EVRHFDLLPAK-GWEVDLDAVEALADENTVAL 187 (319)
Q Consensus 119 ~t~ai~~~~~~l~~-----~gd~Vl~-~~p~~~~~~~~~~~~g~----~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~v 187 (319)
+++++.++++++++ +||.|++ +.|+|+.|...+...+. ....+++..+. ++.+|++.++ +.++++++
T Consensus 106 a~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i 183 (416)
T PRK09440 106 SQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAI 183 (416)
T ss_pred hHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEE
Confidence 99999999999985 5899999 79999999876654432 22222332211 4679999987 35577899
Q ss_pred EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (319)
Q Consensus 188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i 267 (319)
++++||||||.+++.+++++|+++|+++|++||+||+|..+.... ....... ...+++|+++||||+ ++||+|+||+
T Consensus 184 ~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~-~~~~~vI~~~SfSK~-~~pGlRiG~~ 260 (416)
T PRK09440 184 CVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATP-LWNPNIILCMSLSKL-GLPGVRCGIV 260 (416)
T ss_pred EEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCc-cccCCeEEEeccccc-CCCcceEEEE
Confidence 999999999999999999999999999999999999998643110 0001100 114689999999997 9999999999
Q ss_pred EeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968 268 VTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
+++. ++++++...... ..+++.+.|.+++.+ +++.+|.
T Consensus 261 i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~-l~~~~~~ 299 (416)
T PRK09440 261 IADE--------EIIEALSNMNGIISLAPGRLGPAIAAEM-IESGDLL 299 (416)
T ss_pred eCCH--------HHHHHHHHHHHHhccCCCcHHHHHHHHH-hccchHH
Confidence 9853 588888877654 456799999999984 4444443
No 78
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=6e-36 Score=273.40 Aligned_cols=245 Identities=24% Similarity=0.361 Sum_probs=198.0
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
++.++++|+.|+++ +++++.+.+++.+.+.. ...|++ .+.++||+++++++ ++++++|++|+|++++
T Consensus 18 ~~~~~i~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~ 84 (356)
T PRK08056 18 SPDQLLDFSANINP----LGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH------QVPASWILAGNGETES 84 (356)
T ss_pred ChhhEEEeccccCC----CCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence 35679999999876 68999999999887654 346875 46899999999998 5688999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
+..+++++ .+|+ ++++.|+|..|...++..|.+++.++.++++++.+| +++++.+.++++++++++||||||.+++.
T Consensus 85 l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~ 161 (356)
T PRK08056 85 IFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPER 161 (356)
T ss_pred HHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCH
Confidence 99999987 5775 677899999999999999999999998766677777 44555566788999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++++|+++|++++++||+||+|.++.+++..+.+. +...+++++++||||+|+++|+|+||++++++ +++
T Consensus 162 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~-------~~~ 232 (356)
T PRK08056 162 QLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD-------AAV 232 (356)
T ss_pred HHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCCH-------HHH
Confidence 999999999999999999999999988755322222 23346899999999999999999999998542 466
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
++++.... ...++.+.|.++..++ .++.|.
T Consensus 233 ~~l~~~~~-~~~~~~~~~~~a~~~l-~~~~~~ 262 (356)
T PRK08056 233 ARMRRQQM-PWSINAFAALAGEVIL-QDRAYQ 262 (356)
T ss_pred HHHHHhCC-CCchhHHHHHHHHHHh-CCHHHH
Confidence 77765443 2456778887777744 444443
No 79
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-35 Score=267.68 Aligned_cols=238 Identities=21% Similarity=0.386 Sum_probs=205.3
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
.+++++|+.+... +++++.+.+++.+.+. .++.|+.. ...++++++++++.. .++++|++++|+.+.|
T Consensus 21 ~~~~i~LssNenP----~gp~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~~~-----~~~~~V~~gnGsde~i 88 (356)
T COG0079 21 LPGIIKLSSNENP----YGPPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYYGV-----VDPENVLVGNGSDELI 88 (356)
T ss_pred CccceeecCCCCC----CCCCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHhCC-----CCcceEEEcCChHHHH
Confidence 4469999999755 6888999999988776 35678865 789999999999942 5789999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
..++++++.+||+|+++.|+|..|...++..|++++.++..+ |..|++.+.+.+.+++++|++||||||||..++.+
T Consensus 89 ~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~ 165 (356)
T COG0079 89 ELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPRE 165 (356)
T ss_pred HHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999999999999999999854 88999999999988899999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 283 (319)
+++++++.+.+ +.+||+||||.+|.. ...+.......|+++++||||+|+++|+|+||++++ +++++
T Consensus 166 ~l~~l~~~~~~-~~~vVvDEAY~eF~~----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~--------~~~i~ 232 (356)
T COG0079 166 ELRALLEALPE-GGLVVIDEAYIEFSP----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN--------PELIA 232 (356)
T ss_pred HHHHHHHhCCC-CcEEEEeCchhhcCC----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCC--------HHHHH
Confidence 99999999988 999999999999874 222222334567999999999999999999998874 46999
Q ss_pred HHHHhhhhcCCcchHHHHHHHHHHhcc
Q 020968 284 SIKSFLNISSDPATFIQFLKSSRKLKR 310 (319)
Q Consensus 284 ~~~~~~~~~~~~~~~~q~~~~~~l~~~ 310 (319)
.+++.+..+ ..+.++|.++..++-++
T Consensus 233 ~l~~vr~p~-~v~~~a~~aa~aal~~~ 258 (356)
T COG0079 233 ALNKVRPPF-NVSSPALAAAIAALRDA 258 (356)
T ss_pred HHHHhcCCC-CCCHHHHHHHHHHcccH
Confidence 999988863 56888888887754443
No 80
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1.9e-35 Score=270.52 Aligned_cols=244 Identities=15% Similarity=0.224 Sum_probs=193.4
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
...++|+|+.|.+. +++++.+.+++.+.+.. ...|++. +..+||+++|+++ ++++++|++|+|++++
T Consensus 20 ~~~~~i~l~~~~n~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~ 86 (360)
T PRK07392 20 PPDAILDFSASINP----LGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAEL 86 (360)
T ss_pred CcccEEEeCCcCCC----CCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence 34578999999765 67889999999887664 4579865 5689999999999 5689999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCC---cCCHHHHHhhhccCceEEEEcCCCCccccc
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGW---EVDLDAVEALADENTVALVIINPGNPCGNV 199 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 199 (319)
+.++++++. +||.|++++|+|..|...++..|++++.++.+.++++ ..+++.+++.. .+++++++++||||||.+
T Consensus 87 i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~ 164 (360)
T PRK07392 87 LTWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKL 164 (360)
T ss_pred HHHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCC
Confidence 999999875 6889999999999999999999999999998765553 35666666543 367899999999999999
Q ss_pred cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccch
Q 020968 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDS 279 (319)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~ 279 (319)
++.+++. ++++++++ +|+||+|.+|.+++.....+......+++|+++||||.|++||+|+||+++++
T Consensus 165 ~~~~~l~---~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~-------- 232 (360)
T PRK07392 165 WSREAIL---PLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP-------- 232 (360)
T ss_pred cCHHHHH---HHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH--------
Confidence 9966554 55566775 66699999998765432223334455789999999999999999999999864
Q ss_pred HHHHHHHHhhhhcCCcchHHHHHHHHHHhccccccc
Q 020968 280 GIVDSIKSFLNISSDPATFIQFLKSSRKLKRNSFLK 315 (319)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 315 (319)
++++++..... ..+++.+.|.++..++ +++.|.+
T Consensus 233 ~~~~~~~~~~~-~~~~s~~~q~~~~~~l-~~~~~~~ 266 (360)
T PRK07392 233 DRLQRWQQWRD-PWPVNGLAAAAAIAAL-ADRDFQQ 266 (360)
T ss_pred HHHHHHHhhCC-CCCCCHHHHHHHHHHh-ccHHHHH
Confidence 47777765543 3567999999998854 4455554
No 81
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1e-35 Score=272.79 Aligned_cols=239 Identities=18% Similarity=0.191 Sum_probs=196.5
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
.+++++|+.|++. +++++.+.+++.+.+.. ...|++. +..+||+++++++ ++++++|++|+|+++++
T Consensus 42 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai 108 (370)
T PRK09105 42 AEGAVFLNANECP----LGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE------GLPADHVMAYAGSSEPL 108 (370)
T ss_pred CCCcEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh------CcChhhEEEcCChHHHH
Confidence 3578999999976 68899999999887653 2368765 4899999999987 56899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
..++.+++++||+|++++|+|..|...++..|++++.++.+. ++.+|++++++. .++++++++++||||||.+++.+
T Consensus 109 ~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~ 185 (370)
T PRK09105 109 NYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRA 185 (370)
T ss_pred HHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHH
Confidence 999999999999999999999999999999999999998753 567999999876 45678999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++++++.++ +++++|+||+|.+|... + +...+ ...+++++++||||.|+++|+|+||++++. +++
T Consensus 186 ~l~~l~~~~~-~~~~lIvDEaY~~f~~~---~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--------~~i 252 (370)
T PRK09105 186 DIEWLLANKP-AGSVLLVDEAYIHFSDA---P-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP--------DLL 252 (370)
T ss_pred HHHHHHHhCC-CCcEEEEECchHHhccC---c-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCH--------HHH
Confidence 9999998764 59999999999876531 1 22222 345789999999999999999999999853 577
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
++++.. . ...++.+.|.++..++.+ +.|.
T Consensus 253 ~~l~~~-~-~~~~~~~~~~aa~~~L~~-~~~~ 281 (370)
T PRK09105 253 AKLARF-G-HNPLPVPAAAAGLASLRD-PKLV 281 (370)
T ss_pred HHHHhc-C-CCCcCHHHHHHHHHHHhC-HHHH
Confidence 777765 2 234677888887775543 3443
No 82
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=7.7e-36 Score=272.45 Aligned_cols=246 Identities=20% Similarity=0.315 Sum_probs=205.0
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~ 124 (319)
+++|+|+.|.++ +++++.+.+++.+.+.. ...|+ +.|.+++|+++++++ ++++++|++++|+++++.
T Consensus 22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~-~~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~ 88 (352)
T PRK03321 22 PGAIKLSSNETP----FGPLPSVRAAIARAAAG--VNRYP-DMGAVELRAALAEHL------GVPPEHVAVGCGSVALCQ 88 (352)
T ss_pred ccceeccCCCCC----CCCCHHHHHHHHHHHHh--cCcCC-CCcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHH
Confidence 478999999977 67788999999887653 44675 569999999999999 367889999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (319)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 204 (319)
.++..++++||+|+++.|+|..|...++..|.+++.++.+++ +++|++.+++.++++++++++++|+||||.+++.++
T Consensus 89 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~ 166 (352)
T PRK03321 89 QLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAE 166 (352)
T ss_pred HHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHH
Confidence 999999999999999999999998889999999999987533 578999999999888899999999999999999888
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH
Q 020968 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (319)
Q Consensus 205 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 284 (319)
+.++++.+ +++++||+||+|.++.+++....++......+++++++||||.|++||+|+||++++. ++++.
T Consensus 167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~~ 237 (352)
T PRK03321 167 LARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP--------EVIAA 237 (352)
T ss_pred HHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH--------HHHHH
Confidence 88888876 4699999999999998866443344444555789999999999999999999999853 58888
Q ss_pred HHHhhhhcCCcchHHHHHHHHHHhccccccc
Q 020968 285 IKSFLNISSDPATFIQFLKSSRKLKRNSFLK 315 (319)
Q Consensus 285 ~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 315 (319)
+++... ...++.++|.++..++...+.+.+
T Consensus 238 ~~~~~~-~~~~s~~~q~~a~~~l~~~~~~~~ 267 (352)
T PRK03321 238 LRKVAV-PFSVNSLAQAAAIASLAAEDELLE 267 (352)
T ss_pred HHHhcC-CCCCCHHHHHHHHHHhcCHHHHHH
Confidence 876543 346789999887775654444433
No 83
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-35 Score=269.73 Aligned_cols=242 Identities=17% Similarity=0.259 Sum_probs=200.3
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
....++|+.|+++ +++++.+.+++.+.... ...|++. +..+||+++|+++ ++++++|++|+|+++++
T Consensus 31 ~~~~~~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~l 97 (369)
T PRK08153 31 RPFRARIGANESG----FGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGLL 97 (369)
T ss_pred CcceeEecCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence 3345799999976 78899999999887643 3468865 5799999999998 46889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh-ccCceEEEEcCCCCccccccCH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA-DENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~ 202 (319)
..++..++++||.|+++.|+|+.+...+...|.+++.++.+.+ .+|++++++.+ +.+++++++++|+||||.+++.
T Consensus 98 ~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~ 174 (369)
T PRK08153 98 GLIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALLDAARRENAPLVYLANPDNPMGSWHPA 174 (369)
T ss_pred HHHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999998888899999999987432 47899887765 4577899999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++++++++|++ +++||+||+|.++.+++. ..++.. ..+++|+++||||.|++||+|+||++++. +++
T Consensus 175 ~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--------~~~ 242 (369)
T PRK08153 175 ADIVAFIEALPE-TTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGAP--------GTI 242 (369)
T ss_pred HHHHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecCH--------HHH
Confidence 999999999874 999999999999887652 222222 24689999999999999999999999853 577
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHhccccccc
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFLK 315 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 315 (319)
+.++..... .+++++.|.++..++ ++++|.+
T Consensus 243 ~~l~~~~~~-~~~s~~~q~~~~~~l-~~~~~~~ 273 (369)
T PRK08153 243 KAFDKVRNH-FGMNRIAQAAALAAL-KDQAYLA 273 (369)
T ss_pred HHHHHhhcC-CCCCHHHHHHHHHHh-cCHHHHH
Confidence 777766654 467899999998855 4455544
No 84
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3e-35 Score=270.76 Aligned_cols=238 Identities=18% Similarity=0.265 Sum_probs=195.9
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+.++|+|+.|.++ +++++.+.+++.+.. ....|++ .+..+||+++++++ ++++++|++|+|+++++
T Consensus 51 ~~~~i~l~~n~~p----~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i 116 (380)
T PLN03026 51 PEDIVKLDANENP----YGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDS------GLESENILVGCGADELI 116 (380)
T ss_pred ccceEEccCCCCC----CCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHh------CcChhhEEEcCCHHHHH
Confidence 5689999999866 677888888886521 2345765 47899999999998 46889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh-ccCceEEEEcCCCCccccccCH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA-DENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~ 202 (319)
..++.+++++||+|++++|+|..|...++..|.+++.++.+ .+|.+|++++++.+ .++++++++++||||||.+++.
T Consensus 117 ~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~ 194 (380)
T PLN03026 117 DLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD 194 (380)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999998874 35789999999988 6788999999999999999998
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
++++++++.+ ++||+||+|.+|.+.+. ........+++|+++||||.|+++|+|+||++++. +++
T Consensus 195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~---~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~--------~~i 259 (380)
T PLN03026 195 DDLLKILELP----ILVVLDEAYIEFSTQES---RMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL--------SII 259 (380)
T ss_pred HHHHHHHhcC----CEEEEECcchhhcCCcc---hHHHHHhCCCEEEEecchHhhcCccccceeeecCH--------HHH
Confidence 8888888753 89999999999876432 12223345789999999999999999999999853 578
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
+++++.... ++.+.++|.++..++ ++.+|.
T Consensus 260 ~~l~~~~~~-~~~~~~~q~aa~~aL-~~~~~~ 289 (380)
T PLN03026 260 EYLWRAKQP-YNVSVAAEVAACAAL-SNPKYL 289 (380)
T ss_pred HHHHHhcCC-CCCCHHHHHHHHHHh-hCHHHH
Confidence 888776654 457889998888755 333443
No 85
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=6.6e-35 Score=289.38 Aligned_cols=246 Identities=16% Similarity=0.281 Sum_probs=203.1
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCC-CcEEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~~~G~t~ 121 (319)
++.++|+|+.|+++ +++++.+.+++.+.+... .+ ..|.+++|+++++++.+.+|+..++ ++|++++|+++
T Consensus 695 ~g~~vI~LsinE~d----~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~e 765 (1082)
T PLN02672 695 QESSLIHMDVDESF----LPVPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLA 765 (1082)
T ss_pred CCCCEEEEeCCCCC----CCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHH
Confidence 46799999999977 789999999999876542 22 3356789999999999988988765 58999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCC-Cccccc
Q 020968 122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPG-NPCGNV 199 (319)
Q Consensus 122 ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~-nptG~~ 199 (319)
++..++++++++||+|+++.|+|+.|...++..|++++.++.+++++|.+|.+.+++++++ +.+++++++|| ||||.+
T Consensus 766 lL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v 845 (1082)
T PLN02672 766 LFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLL 845 (1082)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCcc
Confidence 9999999999999999999999999999999999999999997667899999999999865 45689999997 999999
Q ss_pred cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC--CCCc----ccCC---CCCeEEEecCccccCCCcceeeEEEee
Q 020968 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF--VPMG----VFGS---IVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~----~~~~---~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
++.+++++|+++|+++|++||+||+|.++.|++... .++. .+.. ..+||+++||||.|++||+|+||++++
T Consensus 846 ~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap 925 (1082)
T PLN02672 846 YSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALN 925 (1082)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeC
Confidence 999999999999999999999999999999876431 1111 1111 247999999999999999999999986
Q ss_pred CCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHH
Q 020968 271 DPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSS 305 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 305 (319)
++ +++++++..... ..+....|.++..
T Consensus 926 ~~-------eLi~~l~~~~~~-s~~~~~~q~Aaaa 952 (1082)
T PLN02672 926 DS-------VLIDAFHSAPGL-SRPHSTLKYTIKK 952 (1082)
T ss_pred CH-------HHHHHHHHhhhh-cCCCcHHHHHHHH
Confidence 52 377888765442 2223345555444
No 86
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=266.95 Aligned_cols=265 Identities=18% Similarity=0.224 Sum_probs=193.1
Q ss_pred CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC---CCcEEEeCCHHHH
Q 020968 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS---PDDVYLTLGCTQA 122 (319)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~---~~~i~~~~G~t~a 122 (319)
+.++.++|....-....+.+.+.+++.+. .......|++..|.++||+++++++.+..+ ..+ .++|++|+|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~a 81 (388)
T PRK08637 4 TKYNATIGMATEKGGPMYLSSLQDLLNDL-TPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHG 81 (388)
T ss_pred cceecceeeEecCCCcchHHHHHHHHHhh-ccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHH
Confidence 45566666533111123333444433332 223456899999999999999999876443 333 2578999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHH-hhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcCCCCccc
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARA-THSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINPGNPCG 197 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p~nptG 197 (319)
+..++.+++++||+|++++|+|+.|...+ ...|.+++.++... +++++|++++++.++ +...++++++||||||
T Consensus 82 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG 160 (388)
T PRK08637 82 LSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTG 160 (388)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCC
Confidence 99999999999999999999999998875 46899999999742 234689999998876 4445677889999999
Q ss_pred cccCHHHHHHHHHHHHH-----cCCEEEEeCCCCCccCCCCCCCCC-ccc-CCCCCe--EEEecCccccCCCcceeeEEE
Q 020968 198 NVYTYQHLQKIAETAKK-----LGIMVIADEVYDHLAFGNTPFVPM-GVF-GSIVPV--LTLGSISKRWIVPGWRLGWLV 268 (319)
Q Consensus 198 ~~~~~~~l~~i~~~~~~-----~~~~li~D~a~~~~~~~~~~~~~~-~~~-~~~~~v--i~~~s~sK~~~~~G~r~G~i~ 268 (319)
.+++.+++++|+++|++ ++++||+||+|.++.|++....++ ..+ ...+++ ++++|+||.|++||+|+||++
T Consensus 161 ~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~ 240 (388)
T PRK08637 161 YTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFIT 240 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEE
Confidence 99999999999998875 899999999999999877554443 222 334565 455699999999999999999
Q ss_pred eeCCCCCccchHHHHHHHHh----hh-hcCCcchHHHHHHHHHHhcccccccc
Q 020968 269 TSDPNGILQDSGIVDSIKSF----LN-ISSDPATFIQFLKSSRKLKRNSFLKS 316 (319)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~q~~~~~~l~~~~~~~~~ 316 (319)
++.+.+ .++++++++... .. ...++|.+.|.++..+ ++++.|.++
T Consensus 241 ~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~-l~~~~~~~~ 290 (388)
T PRK08637 241 FGTKAG--SSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRA-LNSPEFDKE 290 (388)
T ss_pred EccccC--CcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHH-hCCHHHHHH
Confidence 764100 013566666542 11 2346789999999884 445555443
No 87
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-34 Score=264.73 Aligned_cols=241 Identities=19% Similarity=0.336 Sum_probs=196.9
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
.+..++|+.|+++ +++|+.+.+++.+.+.......|++. +.++||+++++++ ++++++|++|+|+++++
T Consensus 21 ~~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l 89 (351)
T PRK14807 21 IPYKYKMDANETP----FELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEII 89 (351)
T ss_pred CCceeEccCCCCC----CCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHH
Confidence 3467899999986 78999999999987765455678754 5689999999998 56889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~ 202 (319)
..++.+++++||+|+++.|+|..+...++..|++++.++.+ .++.+|++++++.+++ +++++++++|+||||.+++.
T Consensus 90 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~ 167 (351)
T PRK14807 90 HLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIER 167 (351)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999875 3467999999999865 78999999999999999997
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++.++++ +++.++|+||+|.++. +....+ .....+++|+++||||.|++||+|+||++++. +++
T Consensus 168 ~~l~~l~~---~~~~~~ivDe~y~~~~--~~~~~~--~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~--------~~~ 232 (351)
T PRK14807 168 EDIIKIIE---KSRGIVVVDEAYFEFY--GNTIVD--VINEFENLIVLRTLSKAFGLAGLRVGYAVANE--------NIL 232 (351)
T ss_pred HHHHHHHH---hCCCEEEEeCcchhhc--ccchHH--HhhhCCCEEEEecchHhcccchhceeeeecCH--------HHH
Confidence 77766654 5567899999998874 222222 12344689999999999999999999999853 578
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
++++..... ...+.+.|.++..++ .+..+.
T Consensus 233 ~~~~~~~~~-~~~~~~~q~~~~~~l-~~~~~~ 262 (351)
T PRK14807 233 KYLNLVKSP-YNINSLSQVIALKVL-RTGVLK 262 (351)
T ss_pred HHHHHccCC-CCcCHHHHHHHHHHH-hHHHHH
Confidence 888766553 456889999998854 334443
No 88
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-35 Score=267.81 Aligned_cols=234 Identities=21% Similarity=0.341 Sum_probs=196.7
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCC-CcEEEeCCHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSP-DDVYLTLGCTQA 122 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~~~G~t~a 122 (319)
+.++++|+.|+++ +++++.+.+++.+.+.......|++ .+..+||++++++++ +.. ++|++|+|++++
T Consensus 25 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~ 93 (356)
T PRK04870 25 ATGMVKLDAMENP----YRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDEL 93 (356)
T ss_pred CCCceeCcCCCCC----CCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHH
Confidence 4589999999976 7999999999998876555567887 578999999999983 233 589999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccC
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYT 201 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~ 201 (319)
+..++.+++++||+|++++|+|..|...++..|++++.++.+ +++.+|++.+++.+. .+++++++++||||||.+++
T Consensus 94 i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~ 171 (356)
T PRK04870 94 IQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD 171 (356)
T ss_pred HHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999885 357899999999885 47899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (319)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 281 (319)
.+++++|+++| +.++|+||+|.++.+.. .. ..+...+++++++|||| +++||+|+||++++. ++
T Consensus 172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~~--~~--~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~--------~~ 235 (356)
T PRK04870 172 DADVERIIEAA---PGLVVVDEAYQPFAGDS--WL--PRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHP--------AW 235 (356)
T ss_pred HHHHHHHHHHC---CCEEEEECCchhhcCcc--hH--HHHhhCCCEEEEecchh-hhhHHHhhhhhhCCH--------HH
Confidence 99999999998 68899999999876432 11 12334468999999999 799999999999853 57
Q ss_pred HHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968 282 VDSIKSFLNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~q~~~~~~l 307 (319)
+++++..+.. ++++.+.|.++..++
T Consensus 236 i~~~~~~~~~-~~~~~~~q~~a~~~l 260 (356)
T PRK04870 236 IAELDKVRPP-YNVNVLTQATALFAL 260 (356)
T ss_pred HHHHHHccCC-CcCCHHHHHHHHHHH
Confidence 7877766543 457888998876644
No 89
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.5e-35 Score=266.04 Aligned_cols=233 Identities=17% Similarity=0.314 Sum_probs=192.8
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
..++|+|+.|++. +++++.+.+++.+.+... ...|++. +.++||+++++++ ++++++|++|+|+++++
T Consensus 23 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al 90 (353)
T PRK05387 23 LAKLIKLNTNENP----YPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL 90 (353)
T ss_pred ccceeeccCCCCC----CCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence 4578999999976 677889999998876643 3578655 6699999999998 46889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
..++++++++||+|++++|+|+.|...++..|++++.++.+ +++.+|++++++ ..+++++++||||||.+++.+
T Consensus 91 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~ 164 (353)
T PRK05387 91 AHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA 164 (353)
T ss_pred HHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999874 357899998874 357889999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 283 (319)
++++|+++++ ++++|+||+|.+|. +....+ .....+++++++||||.|++||+|+||++++. ++++
T Consensus 165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~--~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~~~ 230 (353)
T PRK05387 165 EIERILAANP--DSVVVIDEAYVDFG--GESAIP--LIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--------ELIE 230 (353)
T ss_pred HHHHHHHhCC--CcEEEEeCcccccC--CcchHH--HHhhCCCEEEEEehhHhhcchhhhceeeecCH--------HHHH
Confidence 9999988654 89999999998753 322222 22345679999999999999999999999753 5788
Q ss_pred HHHHhhhh--cCCcchHHHHHHHHHHh
Q 020968 284 SIKSFLNI--SSDPATFIQFLKSSRKL 308 (319)
Q Consensus 284 ~~~~~~~~--~~~~~~~~q~~~~~~l~ 308 (319)
+++..... ...++.+.|.++..++.
T Consensus 231 ~l~~~~~~~~~~~~~~~~q~~~~~~l~ 257 (353)
T PRK05387 231 ALNRVKNSFNSYPLDRLAQAGAIAAIE 257 (353)
T ss_pred HHHHhhccCCCCCcCHHHHHHHHHHhc
Confidence 88776643 24578899999888553
No 90
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.3e-34 Score=265.88 Aligned_cols=244 Identities=18% Similarity=0.304 Sum_probs=202.4
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+.++++|+.|.+. +++++.+.+++.+.+.. ...|++.. ..+||+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~ 96 (367)
T PRK02731 30 GIADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEI 96 (367)
T ss_pred CCCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 46789999999865 46788899999887653 45787653 479999999998 4578899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
+..++.+++++||+|+++.|+|..+...++..|++++.++. +++.+|++.+++.+++++++|++++|+||||.+++.
T Consensus 97 l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 173 (367)
T PRK02731 97 LELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPA 173 (367)
T ss_pred HHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCH
Confidence 99999999999999999999999988888999999998886 346799999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
++++++++.|+ +++++|+||+|.++.+++.....+......+++++++|+||.|+++|+|+||+++++ +++
T Consensus 174 ~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--------~~~ 244 (367)
T PRK02731 174 EEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP--------EII 244 (367)
T ss_pred HHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH--------HHH
Confidence 99999998875 599999999999988765433334333445689999999999999999999999853 577
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHhccccc
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSF 313 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 313 (319)
++++..... ...+.++|.++..++ ++.+|
T Consensus 245 ~~l~~~~~~-~~~~~~~~~~a~~~l-~~~~~ 273 (367)
T PRK02731 245 DALNRVRQP-FNVNSLALAAAVAAL-DDDAF 273 (367)
T ss_pred HHHHHccCC-CCCCHHHHHHHHHHh-CCHHH
Confidence 888776553 355788998888844 44444
No 91
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-34 Score=261.12 Aligned_cols=232 Identities=21% Similarity=0.346 Sum_probs=190.9
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+.++|+|+.|+++ +++++.+.+++.+.+.......|++ .|.++||+++++++ ++++++|++|+|+++++
T Consensus 17 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l 85 (337)
T PRK03967 17 GNYRIWLDKNENP----FDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFY------GLDAENIAVGNGSDELI 85 (337)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence 4478999999976 6888999999998876544567864 68999999999999 46889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
..++..+ +||+|+++.|+|..|...++..|.+++.++.+ .++.+|++.+++.. ++++++++++|+||||.+++.+
T Consensus 86 ~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~ 160 (337)
T PRK03967 86 SYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE 160 (337)
T ss_pred HHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH
Confidence 9988876 79999999999999988889999999999875 34789999998865 4678889999999999999977
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 283 (319)
++.+++ ++++++|+||+|.+|... ... ......+++|+++||||.|++||+|+||+++++ ++++
T Consensus 161 ~l~~i~----~~~~~ii~De~y~~~~~~--~~~--~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~--------~~i~ 224 (337)
T PRK03967 161 EILKVL----ETGKPVVLDEAYAEFSGK--SLI--GLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE--------EIID 224 (337)
T ss_pred HHHHHH----hcCCEEEEECchhhhccc--chH--HHHhhCCCEEEEecchHhhcchhhhheeeecCH--------HHHH
Confidence 666654 369999999999987531 211 122334679999999999999999999999853 5888
Q ss_pred HHHHhhhhcCCcchHHHHHHHHHHh
Q 020968 284 SIKSFLNISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 284 ~~~~~~~~~~~~~~~~q~~~~~~l~ 308 (319)
+++..... ++.+.++|.++..++.
T Consensus 225 ~~~~~~~~-~~~~~~~q~~~~~~l~ 248 (337)
T PRK03967 225 ALYRIKPP-FSLNILTMKIVRLALD 248 (337)
T ss_pred HHHhhcCC-CCCCHHHHHHHHHHHh
Confidence 88877654 3568999999988553
No 92
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-33 Score=255.97 Aligned_cols=230 Identities=19% Similarity=0.280 Sum_probs=185.0
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+.++|+|+.|+++ +++++.+.+++.+.+.......|++. +.++||+++++++++. + +++++|++|+|++++
T Consensus 17 ~~~~~i~l~~~~~~----~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~-~--~~~~~i~it~Ga~~~ 88 (335)
T PRK14808 17 EKRDRTYLALNENP----FPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTD-F--LSKNNVSVGNGADEI 88 (335)
T ss_pred CCCceeEecCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCC-C--CCcceEEEcCCHHHH
Confidence 35689999999977 79999999999887765444457654 8999999999999763 2 689999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
|.++++++ |.|++++|+|..|...++..|++++.++.+. ++.++... + ..++++++++||||||.+++.
T Consensus 89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~ 157 (335)
T PRK14808 89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVN----V-GEGDVVFIPNPNNPTGHVFER 157 (335)
T ss_pred HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCC--cCCCChhH----c-cCCCEEEEeCCCCCCCCCcCH
Confidence 99999887 6799999999999999999999999998754 34444332 2 246899999999999999998
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++++|+ +++++||+||+|.+|. +....+ .....+++|+++||||+|+++|+|+||++++. +++
T Consensus 158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~--~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~--------~~~ 221 (335)
T PRK14808 158 EEIERIL----KTGAFVALDEAYYEFH--GESYVD--LLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE--------KFI 221 (335)
T ss_pred HHHHHHH----hcCCEEEEECchhhhc--CCchHH--HHHhCCCEEEEEechhhccCcccceEEEEeCH--------HHH
Confidence 8888886 4799999999999974 222212 12334689999999999999999999999864 588
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~ 308 (319)
+++++.+.. .+.+.++|.++..++.
T Consensus 222 ~~l~~~~~~-~~~~~~~q~a~~~~l~ 246 (335)
T PRK14808 222 DAYNRVRLP-FNVSYVSQMFAKVALD 246 (335)
T ss_pred HHHHHhcCC-CCCCHHHHHHHHHHHh
Confidence 888776633 4578899988766443
No 93
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=2.8e-33 Score=255.02 Aligned_cols=237 Identities=20% Similarity=0.386 Sum_probs=197.2
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
+++++|+|+.|+++ +++++.+.+++.++... ...|++..+ +++|+++++++ ++++++|++++|++++
T Consensus 17 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~------~~~~~~i~~~~G~~~~ 83 (346)
T TIGR01141 17 GGKEVIKLNSNENP----FGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY------GVDPEQILLGNGSDEI 83 (346)
T ss_pred CCCceEEccCCCCC----CCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh------CcChHHEEEcCCHHHH
Confidence 45789999999976 67889999999987643 347877655 89999999999 3578899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
+..++.+++++||+|++++|+|..+...++..|.+++.++.+.+ +.+|++++++.+.+++++|++++|+||||.+++.
T Consensus 84 l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 161 (346)
T TIGR01141 84 IELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSR 161 (346)
T ss_pred HHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999888888999999999987543 5799999999888888999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++.++++.++ +++++|+|++|..+.+.+. + .......+++++++|+||+|+++|+|+||++++. +++
T Consensus 162 ~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~-~--~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~ 229 (346)
T TIGR01141 162 SDIEAVLERTP-EDALVVVDEAYGEFSGEPS-T--LPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--------EII 229 (346)
T ss_pred HHHHHHHHhCC-CCcEEEEECchhhhcCCcc-H--HHHHhhCCCEEEEehhhHhhhchhhhceeeecCH--------HHH
Confidence 99999999887 7999999999998765321 1 1112233468999999999999999999999853 577
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHH
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l 307 (319)
++++..... .+.++++|.++..++
T Consensus 230 ~~~~~~~~~-~~~~~~~~~~~~~~l 253 (346)
T TIGR01141 230 DALNKVRAP-FNLSRLAQAAAIAAL 253 (346)
T ss_pred HHHHhccCC-CCCCHHHHHHHHHHh
Confidence 777765543 456888998887744
No 94
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.9e-33 Score=252.75 Aligned_cols=229 Identities=19% Similarity=0.310 Sum_probs=183.7
Q ss_pred CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125 (319)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~ 125 (319)
..+.|+.++.. +++++.. ......|+.. +..+||+++++++ ++++++|++|+|+++++.+
T Consensus 32 ~~~~~~~ne~~----~~~~~~~---------~~~~~~Y~~~-~~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~ 91 (364)
T PRK04781 32 GDVWLNANESA----WANPADP---------DASTRRYPDP-QPPGLRSALAALY------GCAPEQLLIGRGSDEAIDL 91 (364)
T ss_pred CCEEeeCCCCC----CCCChhh---------cchhccCCCC-CHHHHHHHHHHHh------CcChHHEEEeCCHHHHHHH
Confidence 45778777643 3444321 1124578754 4699999999998 4688999999999999999
Q ss_pred HHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccC-CCCCcCCHHHHHhhh-ccCceEEEEcCCCCccccccCH
Q 020968 126 ILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLP-AKGWEVDLDAVEALA-DENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 126 ~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~ 202 (319)
++++++.+| ++|+++.|+|..|...++..|.+++.++... .+++.+|++++++.+ .++++++++++||||||.+++.
T Consensus 92 ~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~ 171 (364)
T PRK04781 92 LVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIAL 171 (364)
T ss_pred HHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCH
Confidence 999999888 7999999999999888899999999999743 456778999886544 5678999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++++++++|++ +++||+||+|.+|.+.. .........+++|+++||||+|++||+|+||++++. +++
T Consensus 172 ~~~~~l~~~~~~-~~~iI~Deay~~f~~~~---~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~--------~l~ 239 (364)
T PRK04781 172 DQIERALQALQG-KALVVVDEAYGEFSDVP---SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANA--------ELI 239 (364)
T ss_pred HHHHHHHHhCCC-CcEEEEeCcchhhcCCc---chHHHHhhCCCEEEEecChhhcccccceeeeeeCCH--------HHH
Confidence 999999999864 79999999999987532 122223445789999999999999999999999853 588
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHH
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l 307 (319)
+.+++.... .+.+.+.|.++..++
T Consensus 240 ~~l~~~~~~-~~~~~~~~~~a~~~l 263 (364)
T PRK04781 240 AVLRRCQAP-YPVPTPCAALAEQAL 263 (364)
T ss_pred HHHHhccCC-CCCCHHHHHHHHHHH
Confidence 888877654 356888898777644
No 95
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=4.6e-32 Score=243.32 Aligned_cols=217 Identities=15% Similarity=0.229 Sum_probs=173.4
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
..++|+|+.|... ++ |+.+.+++.+.+.. ...|+. ...+|+++++++. ++|++|+|+++++
T Consensus 7 ~~~~i~l~~~~np----~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~al 67 (311)
T PRK08354 7 EEGLIDFSASVNP----YP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEAL 67 (311)
T ss_pred ccceeEecCCCCC----CC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHHH
Confidence 4578999999643 33 57888888877543 346753 4789999999882 4799999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
..++..+ .+||+|+++.|+|..|...++..|.+++.++ +|++.+++.++ +++++++++||||||.+++.+
T Consensus 68 ~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~ 137 (311)
T PRK08354 68 YLIGILA-LRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFK 137 (311)
T ss_pred HHHHHhh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHH
Confidence 9888654 4899999999999999999999999987543 58888988776 467899999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 283 (319)
++++|+++|+++|+++|+||+|.+|.+++.. . ..+++|+++||||+|++||+|+||+++ +.+
T Consensus 138 ~l~~l~~~a~~~~~~li~De~y~~f~~~~~~---~----~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~~ 199 (311)
T PRK08354 138 ELKPLLDAVEDRNALLILDEAFIDFVKKPES---P----EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FEE 199 (311)
T ss_pred HHHHHHHHhhhcCcEEEEeCcchhccccccc---c----CCCcEEEEeccHhhcCCccceeeeeee-----------hHH
Confidence 9999999999999999999999999886521 1 146899999999999999999999997 344
Q ss_pred HHHHhhhhcCCcchHHHHHHHHHHhc
Q 020968 284 SIKSFLNISSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 284 ~~~~~~~~~~~~~~~~q~~~~~~l~~ 309 (319)
.++..... ...+...|.++.. +++
T Consensus 200 ~l~~~~~~-~~~~~~~~~~~~~-~~~ 223 (311)
T PRK08354 200 AFRSVRMP-WSIGSTGYAFLEF-LIE 223 (311)
T ss_pred HHHHcCCC-ccCCHHHHHHHHH-HHH
Confidence 55554432 2345555555554 443
No 96
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.2e-32 Score=252.28 Aligned_cols=234 Identities=19% Similarity=0.341 Sum_probs=189.7
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE-eCCHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL-TLGCTQA 122 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~-~~G~t~a 122 (319)
+.++|+|+.|++. +++++.+.+++.+.+.. ...|++. ..+++|+++++++ +++++++++ ++|++++
T Consensus 33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~ 99 (361)
T PRK00950 33 PESIIKLGSNENP----LGPSPKAVEAIEKELSK--IHRYPEP-DAPELREALSKYT------GVPVENIIVGGDGMDEV 99 (361)
T ss_pred ccceEEccCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCC-CHHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence 3489999999865 57788899998877654 3468765 4499999999998 457889999 7899999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
+..++++++++||+|+++.|+|..+...++..|++++.++. +.+|.+|++.+++.++++++++++++|+||||.+++.
T Consensus 100 i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~ 177 (361)
T PRK00950 100 IDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE 177 (361)
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence 99999999999999999999999998889999999998884 3457899999999888788999999999999999996
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
+++. ++|+++|+++|+|++|.++. +....++ ....+++++++||||.|++||+|+||+++++ +++
T Consensus 178 ~~l~---~l~~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--------~~~ 242 (361)
T PRK00950 178 EDIR---KILESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--------WLI 242 (361)
T ss_pred HHHH---HHHHHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCCH--------HHH
Confidence 6555 55667799999999999876 2222221 2234679999999999999999999999853 577
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHh
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~ 308 (319)
+.++..... ...+.+.|.++..++.
T Consensus 243 ~~~~~~~~~-~~~~~~~~~~a~~~l~ 267 (361)
T PRK00950 243 DYYMRAKTP-FSLTRLSQAAAIAALS 267 (361)
T ss_pred HHHHHhcCC-CCCCHHHHHHHHHHhc
Confidence 777776654 3467888888777453
No 97
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-33 Score=253.98 Aligned_cols=229 Identities=20% Similarity=0.333 Sum_probs=185.0
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~ 124 (319)
.+.++|+.+++. +++++.+ .......|+.. ...+|++++++++ ++++++|++|+|+++++.
T Consensus 28 ~~~~~l~~Nenp----~~~~~~~--------~~~~~~~Yp~~-~~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~ 88 (351)
T PRK01688 28 NGDVWLNANEYP----TAVEFQL--------TQQTLNRYPEC-QPKAVIENYAAYA------GVKPEQVLVSRGADEGIE 88 (351)
T ss_pred CCceEecCCCCC----CCCChhh--------cccccccCCCC-ChHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence 356999999865 4555543 11234568654 4589999999998 568999999999999999
Q ss_pred HHHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 125 VILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 125 ~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
.++++++++| |+|+++.|+|..|...++..|++++.++.++ +|.+|++++++++ +++++++++|||||||.+++.+
T Consensus 89 ~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~ 165 (351)
T PRK01688 89 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQ 165 (351)
T ss_pred HHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHH
Confidence 9999999887 9999999999999999999999999998753 5889999999887 4789999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 283 (319)
++++|++.|++ +.+||+||+|.+|.... .....+...+++|+++||||.|+++|+|+||++++. ++++
T Consensus 166 ~l~~l~~~~~~-~~~vivDEay~~f~~~~---s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~--------~~i~ 233 (351)
T PRK01688 166 DLRTLLELTRG-KAIVVADEAYIEFCPQA---SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE--------EVIN 233 (351)
T ss_pred HHHHHHHhCCC-CcEEEEECchhhcCCCC---ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH--------HHHH
Confidence 99999999986 68899999999986321 112223445789999999999999999999999753 5788
Q ss_pred HHHHhhhhcCCcchHHHHHHHHHHh
Q 020968 284 SIKSFLNISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 284 ~~~~~~~~~~~~~~~~q~~~~~~l~ 308 (319)
.+++.... +.++.+.|.++..++.
T Consensus 234 ~l~~~~~~-~~v~~~~~~~a~~~L~ 257 (351)
T PRK01688 234 LLLKVIAP-YPLSTPVADIAAQALS 257 (351)
T ss_pred HHHhccCC-CCCCHHHHHHHHHHHh
Confidence 88766543 3467777777766443
No 98
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=5e-32 Score=244.96 Aligned_cols=216 Identities=17% Similarity=0.191 Sum_probs=168.8
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~ 124 (319)
.++|+|+.+.... .++++.+.+ .. ...|+. +..+||+++++++ ..++|++|+|++++|.
T Consensus 20 ~~~i~l~~ne~p~---~~~~~~~~~---~~-----~~~yp~--~~~~Lr~~ia~~~--------~~~~I~it~Gs~~al~ 78 (330)
T PRK05664 20 ADWLDLSTGIAPW---PWPVPAIPA---DA-----WARLPE--TDDGLEAAARAYY--------GAPQLLPVAGSQAAIQ 78 (330)
T ss_pred HHheeecCCcCCC---CCCCcccCH---HH-----HHhCCC--ChHHHHHHHHHHh--------CCCCEEECcCHHHHHH
Confidence 4679999995321 122122211 11 124754 3389999999998 3579999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968 125 VILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (319)
Q Consensus 125 ~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 204 (319)
+++. +.+||+|++++|+|+.|...++..|++++.++.+ ++++.++ +++++++++||||||.+++.++
T Consensus 79 ~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~ 145 (330)
T PRK05664 79 ALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD-SLDVLVVVNPNNPTGRRFDPAR 145 (330)
T ss_pred HHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc-CCCEEEEeCCcCCCCCccCHHH
Confidence 8863 4799999999999999999999999999988752 3444443 5678999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH
Q 020968 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (319)
Q Consensus 205 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 284 (319)
+++|+++|++++++||+||+|.++.. ..++..+...+++|+++||||.|++||+|+||++++. ++++.
T Consensus 146 l~~l~~~~~~~~~~iI~DE~y~~~~~----~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~--------~l~~~ 213 (330)
T PRK05664 146 LLAWHARLAARGGWLVVDEAFMDNTP----QHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEP--------ALLRA 213 (330)
T ss_pred HHHHHHHHHhcCCEEEEECCcccCCC----cccccccccCCCEEEEeeccccccCCCcceEEEEeCH--------HHHHH
Confidence 99999999999999999999987641 2344455556789999999999999999999999853 58888
Q ss_pred HHHhhhhcCCcchHHHHHHHHHH
Q 020968 285 IKSFLNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 285 ~~~~~~~~~~~~~~~q~~~~~~l 307 (319)
+...... ...+.+.|.++..++
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~~~L 235 (330)
T PRK05664 214 LAELLGP-WTVSGPTRWLAQAAL 235 (330)
T ss_pred HHHhcCC-CCCCHHHHHHHHHHH
Confidence 8776543 356788888877744
No 99
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-31 Score=242.34 Aligned_cols=225 Identities=21% Similarity=0.274 Sum_probs=180.2
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
.+++++|+.|++. +++++.+.+++.+.+.. ...|++..|..++|+++++++ ++++++|++|+|+++++
T Consensus 21 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al 88 (349)
T PRK07908 21 GPGLLDFAVNVRH----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGF 88 (349)
T ss_pred CCCeEEecCCCCC----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 6789999999976 68899999999987654 357988889999999999998 46889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
..+++ + ++| .++++.|+|..+...++..|++++.++.+. ++.+|++.+ .++++++++++||||||.++|.+
T Consensus 89 ~~~~~-l-~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~ 159 (349)
T PRK07908 89 ALLAR-L-RPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE 159 (349)
T ss_pred HHHHh-c-CCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH
Confidence 99888 4 564 677889999999999999999999998854 367888755 34678999999999999999976
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 283 (319)
++. ++|+ ++.++|+||+|.++..+ . ..++... ..+++++++||||.|+++|+|+||++++. ++++
T Consensus 160 ~l~---~l~~-~~~~iIvDe~y~~~~~~-~-~~~l~~~-~~~~~i~i~S~SK~~~l~GlRiG~~~~~~--------~~~~ 224 (349)
T PRK07908 160 QLL---ALRR-PGRILVVDEAFADAVPG-E-PESLAGD-DLPGVLVLRSLTKTWSLAGLRVGYALGAP--------DVLA 224 (349)
T ss_pred HHH---HHHh-cCCEEEEECcchhhccC-C-ccccccc-cCCCEEEEeecccccCCccceeeeeecCH--------HHHH
Confidence 554 4554 47889999999997643 2 3344332 33579999999999999999999999753 5778
Q ss_pred HHHHhhhhcCCcchHHHHHHHH
Q 020968 284 SIKSFLNISSDPATFIQFLKSS 305 (319)
Q Consensus 284 ~~~~~~~~~~~~~~~~q~~~~~ 305 (319)
+++..... ...+++.|.+++.
T Consensus 225 ~~~~~~~~-~~~~~~~~~a~~~ 245 (349)
T PRK07908 225 RLTRGRAH-WPVGTLQLEAIAA 245 (349)
T ss_pred HHHhcCCC-CCccHHHHHHHHH
Confidence 77765543 3456677776666
No 100
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=8e-32 Score=244.26 Aligned_cols=223 Identities=14% Similarity=0.182 Sum_probs=171.5
Q ss_pred CCeEeccCCCCCCCCCCCCc-HHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC-CCcEEEeCCHHHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTA-SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCTQA 122 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~-~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~~~G~t~a 122 (319)
.++++|+.+... ++++ +.+.. .. ...|+.. . .+||+++++++ ++. +++|++|+|++++
T Consensus 24 ~~~i~ls~Nenp----~~~~~~~~~~---~~-----~~~Yp~~-~-~~L~~~ia~~~------~~~~~~~I~i~~Gs~e~ 83 (339)
T PRK06959 24 DAWLDLSTGINP----HGYPVPPVPA---DA-----WRRLPED-D-DGLAACAARYY------GAPDAAHVLPVAGSQAA 83 (339)
T ss_pred hhhceeccCCCC----CCCCCCCCCH---HH-----HHhCCCc-h-HHHHHHHHHHh------CCCCcccEEECcCHHHH
Confidence 568999999744 2333 22111 11 2358753 4 89999999998 344 5899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCH
Q 020968 123 IEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 202 (319)
|.++.. ++++|+ |+++.|+|..|...++..|.+++.++.+. +.+ .+..+++++++||||||.+++.
T Consensus 84 i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----~~~~~~v~l~nPnNPTG~~~s~ 149 (339)
T PRK06959 84 IRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----PAALTHLIVVNPNNPTAERLPA 149 (339)
T ss_pred HHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----cccCCEEEEeCCCCCCCCCCCH
Confidence 997755 567776 88999999999999999999998887532 222 2245689999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
++++++++.|++++.++|+||+|.++.+. .++..+...+++|+++||||.|++||+|+||++++. +++
T Consensus 150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~--------~li 217 (339)
T PRK06959 150 ARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP--------ALL 217 (339)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecCH--------HHH
Confidence 99999999999999999999999998642 233333334679999999999999999999999853 588
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHhccccccc
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFLK 315 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 315 (319)
+++++.... +..+.+.|.++..++ ++.+|.+
T Consensus 218 ~~l~~~~~~-~~vs~~~q~a~~~~L-~~~~~~~ 248 (339)
T PRK06959 218 AALRDALGA-WTVSGPARHAVRAAF-ADAAWQA 248 (339)
T ss_pred HHHHHhcCC-CCCcHHHHHHHHHHh-CcHHHHH
Confidence 888887654 346889999988854 4444443
No 101
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.1e-31 Score=242.95 Aligned_cols=215 Identities=19% Similarity=0.227 Sum_probs=168.3
Q ss_pred CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125 (319)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~ 125 (319)
++|+|+.+... +.. ......|+. ....+||+++++++ ++++++|++|+|+++++..
T Consensus 17 ~~i~l~~Nenp----~~~-------------~~~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~ 72 (332)
T PRK06425 17 RIIDFSANIND----FMD-------------IGDISIYPE-ISYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYR 72 (332)
T ss_pred CEEEeccccCC----CcC-------------hhhcccCcC-cCHHHHHHHHHHHh------CCCcceEEECCCHHHHHHH
Confidence 78999999743 210 012346864 46799999999999 5689999999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHH
Q 020968 126 ILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (319)
Q Consensus 126 ~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l 205 (319)
++. +.++| .|++++|+|..|...++..|++++.++.+. +..|.+.+++ .+++++++++||||||.+++.+++
T Consensus 73 ~~~-~~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~ 144 (332)
T PRK06425 73 LLS-YINVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSL 144 (332)
T ss_pred HHH-HhCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHH
Confidence 997 45676 477779999999999999999999999853 3456665543 367899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHH
Q 020968 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSI 285 (319)
Q Consensus 206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~ 285 (319)
++|+++|++++++||+||+|.+|.+++. +.........+++|+++||||.|++||+|+||++++. ++++++
T Consensus 145 ~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~--------~li~~l 215 (332)
T PRK06425 145 LTISEICRKKGALLFIDEAFIDFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD--------YNMKIS 215 (332)
T ss_pred HHHHHHHHHcCCEEEEecchhccccccc-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH--------HHHHHH
Confidence 9999999999999999999999987542 1222222344689999999999999999999999864 578877
Q ss_pred HHhhhhcCCcchHHHHH
Q 020968 286 KSFLNISSDPATFIQFL 302 (319)
Q Consensus 286 ~~~~~~~~~~~~~~q~~ 302 (319)
+.....+ ..+.+++.+
T Consensus 216 ~~~~~~~-~~~~~~~~~ 231 (332)
T PRK06425 216 RKITEPW-SVCDPAIDF 231 (332)
T ss_pred HHcCCCC-ccCHHHHHH
Confidence 7654432 234444433
No 102
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-32 Score=247.76 Aligned_cols=227 Identities=19% Similarity=0.338 Sum_probs=181.2
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~ 124 (319)
.++++|+.+++. +++++.+ ... ....|++. +..+||+++|+++ ++++++|++|+|++++|.
T Consensus 31 ~~~~~l~~ne~~----~~~~~~~------~~~--~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i~ 91 (354)
T PRK04635 31 RGDIWINANESP----FNNEYKL------DLA--RLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAIE 91 (354)
T ss_pred CCcEEeeCCCCC----CCCChhh------hhH--HhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHHH
Confidence 467999999865 4555433 111 24578865 5799999999997 578999999999999999
Q ss_pred HHHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 125 VILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 125 ~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
+++++++++| |+|+++.|+|..|...++..|++++.++.+ +++.+|++.++. + +++++|++++||||||.+++.+
T Consensus 92 ~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~--~~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~ 167 (354)
T PRK04635 92 LLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLT--ADYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRA 167 (354)
T ss_pred HHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecC--CCCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHH
Confidence 9999999998 999999999999999999999999999985 346789988874 3 5789999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVD 283 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~ 283 (319)
+++++++.|+ +++||+||+|.++.... . ........+++++++||||+|+++|+|+||++++. ++++
T Consensus 168 ~l~~l~~~~~--~~~vivDeay~~~~~~~-s--~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~--------~~~~ 234 (354)
T PRK04635 168 DIEQLIEMTP--DAIVVVDEAYIEFCPEY-S--VADLLASYPNLVVLRTLSKAFALAGARCGFTLANE--------ELIE 234 (354)
T ss_pred HHHHHHHhCC--CcEEEEeCchHhhccCc-c--hHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCH--------HHHH
Confidence 9999999876 49999999999876321 1 11112344689999999999999999999999853 5777
Q ss_pred HHHHhhhhcCCcchHHHHHHHHHHh
Q 020968 284 SIKSFLNISSDPATFIQFLKSSRKL 308 (319)
Q Consensus 284 ~~~~~~~~~~~~~~~~q~~~~~~l~ 308 (319)
.++..... .+.+.+.|.++..++.
T Consensus 235 ~l~~~~~~-~~~~~~~~~~a~~~l~ 258 (354)
T PRK04635 235 ILMRVIAP-YPVPLPVSEIATQALS 258 (354)
T ss_pred HHHhhcCC-CCCCHHHHHHHHHHHh
Confidence 77765443 3456777777666443
No 103
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.97 E-value=6.5e-31 Score=237.74 Aligned_cols=227 Identities=20% Similarity=0.283 Sum_probs=181.1
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
++++++|+.|.+. ++++ ..+.. .....+|++..+ +++|+++++++ ++++++|++|+|+++++
T Consensus 16 ~~~~~~~~~~~~~----~~~~--~~~~~-----~~~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~i 77 (330)
T TIGR01140 16 PEDWLDFSTGINP----LGPP--VPPIP-----ASAWARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEAI 77 (330)
T ss_pred hhheeEccccCCC----CCCC--hhhcc-----hHHHhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence 6789999999865 2322 11111 112457887665 99999999998 45789999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHH
Q 020968 124 EVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQ 203 (319)
Q Consensus 124 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 203 (319)
..++..+ .+| +|++++|+|..+...++..|++++.++ |++.+++.+. +++++++++|+||||.+++.+
T Consensus 78 ~~~~~~l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~~ 145 (330)
T TIGR01140 78 YLLPRLL-APG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPPE 145 (330)
T ss_pred HHHHHHh-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCHH
Confidence 9987664 677 799999999999999999999988776 7888888884 577899999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHH
Q 020968 204 HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 204 ~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
++++|+++|+++|++||+|++|.++.+.. ++..+ ...+++|+++|+||.|+++|+|+||+++++ +++
T Consensus 146 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--------~~~ 213 (330)
T TIGR01140 146 TLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--------ALL 213 (330)
T ss_pred HHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCCH--------HHH
Confidence 99999999999999999999999887532 22222 234689999999999999999999999853 477
Q ss_pred HHHHHhhhhcCCcchHHHHHHHHHHhcccccc
Q 020968 283 DSIKSFLNISSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 283 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
+++...... ..++.++|.++.. +++++.|.
T Consensus 214 ~~l~~~~~~-~~~s~~~q~~~~~-~l~~~~~~ 243 (330)
T TIGR01140 214 ARLREALGP-WTVNGPARAAGRA-ALADTAWQ 243 (330)
T ss_pred HHHHhcCCC-CCchHHHHHHHHH-HHhchHHH
Confidence 777766543 3567889998888 54555553
No 104
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=227.73 Aligned_cols=227 Identities=25% Similarity=0.434 Sum_probs=196.3
Q ss_pred CCCCCCCcCCHHHHHHHHHHHhhhCC--CCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh-hCCC
Q 020968 80 FNCYSSTVGILPARRAIADYLNRDLP--YKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT-HSHL 156 (319)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~-~~g~ 156 (319)
...|.+..|.+++|+++|+++.+..| ..++++++++++|+|.+++.+...|.+|||.-+++.|.|+++..-++ ..|+
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgv 193 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 193 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCc
Confidence 34688888999999999999988554 45688999999999999999999999999999999999999875554 6799
Q ss_pred eEEEEeccCCCCCcCCHHHHHhhhc------cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccC
Q 020968 157 EVRHFDLLPAKGWEVDLDAVEALAD------ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230 (319)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~l~------~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~ 230 (319)
+++++.....++|+++.+.+|.++. .+.+.++++||+||-|.+++++++..+++++.++|+.+|+||+|+.-+|
T Consensus 194 eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF 273 (471)
T KOG0256|consen 194 EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVF 273 (471)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhccccc
Confidence 9999999999999999999998874 2668999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccC-----CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHH
Q 020968 231 GNTPFVPMGVFG-----SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSS 305 (319)
Q Consensus 231 ~~~~~~~~~~~~-----~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 305 (319)
+..++.++.++. ..+++-++.|+||-||+||+|+|.|...|+ .+....++..+. ..+|+..|..++.
T Consensus 274 ~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne-------~VvsaA~kmssf-~~vSs~tQ~~la~ 345 (471)
T KOG0256|consen 274 DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE-------DVVSAATKMSSF-GLVSSQTQYLLAS 345 (471)
T ss_pred CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh-------HHHHHHHHHhhc-cCCcHHHHHHHHH
Confidence 988887766653 335788999999999999999999998764 366666555543 5679999999999
Q ss_pred HHhccccccc
Q 020968 306 RKLKRNSFLK 315 (319)
Q Consensus 306 ~l~~~~~~~~ 315 (319)
++.++.|.+
T Consensus 346 -LLSD~~f~~ 354 (471)
T KOG0256|consen 346 -LLSDEEFTR 354 (471)
T ss_pred -HhchHHHHH
Confidence 766666654
No 105
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.96 E-value=8.5e-28 Score=218.49 Aligned_cols=250 Identities=31% Similarity=0.524 Sum_probs=199.8
Q ss_pred EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHH
Q 020968 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL 127 (319)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~ 127 (319)
+||+.|++. +...+.+..++...........|++..+..++++.+++++...++.....+++++++|+++++..++
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~ 76 (350)
T cd00609 1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76 (350)
T ss_pred CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 578888865 4556666666554222223457888889999999999999987766566789999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHH
Q 020968 128 TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQK 207 (319)
Q Consensus 128 ~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~ 207 (319)
.++.++|++|+++.++|.++...++..|.+++.++.+.......+.+.++....++++++++++|+||||.+++.+++++
T Consensus 77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~ 156 (350)
T cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE 156 (350)
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999999865444333336666666778899999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH
Q 020968 208 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287 (319)
Q Consensus 208 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~ 287 (319)
|+++|+++|+++|+|++|+.+.+.+.....+......+.+++++|++|.++.+|.|+||++++++ ++.+.++.
T Consensus 157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-------~~~~~~~~ 229 (350)
T cd00609 157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-------ELLERLKK 229 (350)
T ss_pred HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-------HHHHHHHH
Confidence 99999999999999999999877654432223344445689999999999889999999998542 47777776
Q ss_pred hhhh-cCCcchHHHHHHHHHHh
Q 020968 288 FLNI-SSDPATFIQFLKSSRKL 308 (319)
Q Consensus 288 ~~~~-~~~~~~~~q~~~~~~l~ 308 (319)
.... ...++...|.++..++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~ 251 (350)
T cd00609 230 LLPYTTSGPSTLSQAAAAAALD 251 (350)
T ss_pred HHHhcccCCChHHHHHHHHHHh
Confidence 6553 45678888888777443
No 106
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.96 E-value=2.7e-28 Score=214.87 Aligned_cols=282 Identities=20% Similarity=0.272 Sum_probs=206.8
Q ss_pred CCCCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHH------------------
Q 020968 8 NGNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVD------------------ 69 (319)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~------------------ 69 (319)
|+-..++.++..-+..+.++++.+.. +.. ..+..+|+|+.|.|.... |+.-....+
T Consensus 4 ~~~dys~~ls~es~srk~~p~~~~~~-~~s----~~~i~~i~lagGlPnp~~-fp~~~~s~~p~~~~~~e~~~~~~~~~~ 77 (472)
T KOG0634|consen 4 PPKDYSHHLSKESASRKLSPLRALGD-IKS----ASPISIISLAGGLPNPDY-FPIRSDSIKPQGSWKKENGKKLNNVTF 77 (472)
T ss_pred CcccHHHHhcccccccccChHHHhhh-Hhh----cCCCceEEecCCCCCCCc-ccccccccccccCccccccccccceee
Confidence 45555555554444555566776654 322 224458999999765210 222211111
Q ss_pred HHHHHhhc-----CCCCCCCCCcCCHHHHHHHHHHHh-hhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 020968 70 AIVHSVRS-----ARFNCYSSTVGILPARRAIADYLN-RDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPG 143 (319)
Q Consensus 70 a~~~~~~~-----~~~~~Y~~~~g~~~lr~~ia~~~~-~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~ 143 (319)
++.+.... ....+|++..|.++|...+.++.. ..+......=++++|+|.|.++..+++.++++||.|+++..+
T Consensus 78 ~~~~~~~~~~l~~s~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~t 157 (472)
T KOG0634|consen 78 AFENEASENTLPLSRALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYT 157 (472)
T ss_pred eccccCCcccchhhhhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEeccc
Confidence 01111111 123589999999999999999665 222222223389999999999999999999999999999999
Q ss_pred CcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc---C-----ceEEEEcCC--CCccccccCHHHHHHHHHHHH
Q 020968 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---N-----TVALVIINP--GNPCGNVYTYQHLQKIAETAK 213 (319)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~-----~~~v~l~~p--~nptG~~~~~~~l~~i~~~~~ 213 (319)
|++.....+..|+++++|+++.+ +++++.|++.+.. . ..-|+.+.| +||||..++.+..++|.++|+
T Consensus 158 y~~AL~s~~a~gv~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LAr 234 (472)
T KOG0634|consen 158 YPSALQSMEALGVKIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLAR 234 (472)
T ss_pred chHHHHhccccCceEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHH
Confidence 99988999999999998888543 6899999998742 1 134555666 899999999999999999999
Q ss_pred HcCCEEEEeCCCCCccCCC--------CC-----------CCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCC
Q 020968 214 KLGIMVIADEVYDHLAFGN--------TP-----------FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG 274 (319)
Q Consensus 214 ~~~~~li~D~a~~~~~~~~--------~~-----------~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~ 274 (319)
+||++||+||.|..+.++. .+ .+++.+.+.++|||...||||. .+||+|+||+.+++
T Consensus 235 KyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~--- 310 (472)
T KOG0634|consen 235 KYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS--- 310 (472)
T ss_pred HcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH---
Confidence 9999999999999988762 11 1233345667899999999999 59999999999864
Q ss_pred CccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968 275 ILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK 307 (319)
Q Consensus 275 ~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l 307 (319)
.+++++.+..+. +.++|.+.|..+.+.+
T Consensus 311 -----~~l~ril~~ae~~t~~pSg~sq~iv~a~l 339 (472)
T KOG0634|consen 311 -----LFLKRILDLAEVATSGPSGFSQGIVYAML 339 (472)
T ss_pred -----HHHHHHhhhcceeecCcccccHHHHHHHH
Confidence 477888777764 6779999999988854
No 107
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.96 E-value=4.1e-28 Score=227.02 Aligned_cols=265 Identities=17% Similarity=0.121 Sum_probs=195.9
Q ss_pred HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcH---HHHHHHHHHhhcCCCCCCCCCcCCHHHHHH
Q 020968 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTAS---VAVDAIVHSVRSARFNCYSSTVGILPARRA 95 (319)
Q Consensus 19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~---~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 95 (319)
+++.+.++.+..+.++..+ + +..+.++|+|+.|+|. .++.+++ .+.+++.+++..+. ..|++..|.++||++
T Consensus 12 r~~~v~~~~~~~~~~~~~~-l-~~~g~~~~~L~~g~p~--~D~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lrea 86 (460)
T PRK13238 12 RIKMVEPIRLTTREERERA-L-AEAGYNPFLLKSEDVF--IDLLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDA 86 (460)
T ss_pred eeceeccccccCHHHHHHH-H-HHcCCCEEeCCCCCCC--CCCCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHH
Confidence 4556666666666654432 2 2347899999999984 1245544 57777777775544 479999999999999
Q ss_pred HHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCC------CCC
Q 020968 96 IADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPA------KGW 169 (319)
Q Consensus 96 ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~------~~~ 169 (319)
++++++ .+++++|+|+++|+..++.+++++|| |++++|.|..|...+...|.+++.+++++. ++|
T Consensus 87 ia~~~~--------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f 157 (460)
T PRK13238 87 VKDIFG--------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPF 157 (460)
T ss_pred HHHHhC--------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccc
Confidence 999993 45799999999999999999999999 999999999999889999999999988642 345
Q ss_pred c--CCHHHHHhhhcc----CceEEEEcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCC--CccCCC-----CCC
Q 020968 170 E--VDLDAVEALADE----NTVALVIINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYD--HLAFGN-----TPF 235 (319)
Q Consensus 170 ~--~d~~~l~~~l~~----~~~~v~l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~--~~~~~~-----~~~ 235 (319)
. +|+++|++.+.+ ++++|++++|+|||| .+++.+++++|.++|+++|++||+|+++. ...|.. ...
T Consensus 158 ~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~ 237 (460)
T PRK13238 158 KGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKD 237 (460)
T ss_pred cCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccC
Confidence 4 999999999873 688999999999997 99999999999999999999999999763 233322 111
Q ss_pred CCCcccCCCCCeEEEecCccccCCCccee-----e-EEEeeCCCCCccchHHHHHHHHhh----h--hcCCcchHHHHHH
Q 020968 236 VPMGVFGSIVPVLTLGSISKRWIVPGWRL-----G-WLVTSDPNGILQDSGIVDSIKSFL----N--ISSDPATFIQFLK 303 (319)
Q Consensus 236 ~~~~~~~~~~~vi~~~s~sK~~~~~G~r~-----G-~i~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~q~~~ 303 (319)
.++..+ ++.++|++|.+.+.|+|+ | ++++++ +++.++++... + .+.+.+...|.++
T Consensus 238 ~si~~i-----~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Al 305 (460)
T PRK13238 238 KSIKEI-----AREMFSYADGLTMSAKKDAMVNIGGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEAL 305 (460)
T ss_pred CCHHHH-----hhhhcccCcEEEEecccCCCCcceeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHH
Confidence 222111 233456666666666665 3 455443 35788877663 2 1233455568888
Q ss_pred HHHHhc
Q 020968 304 SSRKLK 309 (319)
Q Consensus 304 ~~~l~~ 309 (319)
+..+.+
T Consensus 306 a~~l~e 311 (460)
T PRK13238 306 AVGLYE 311 (460)
T ss_pred HhhHHH
Confidence 875543
No 108
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=6.7e-26 Score=191.01 Aligned_cols=262 Identities=26% Similarity=0.392 Sum_probs=194.8
Q ss_pred ccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHH----HhhcC----CCCCCCCCcCCHHHHHHHH
Q 020968 26 ITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVH----SVRSA----RFNCYSSTVGILPARRAIA 97 (319)
Q Consensus 26 ~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~----~~~~~----~~~~Y~~~~g~~~lr~~ia 97 (319)
++|+++++++-..+ +.++.|.|+.|+|.. .|++.+.+++ .+.++ ...+|+.+.|...|.++++
T Consensus 14 sGi~~lMdDl~d~L---rt~g~imLggGNPa~------iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala 84 (417)
T COG3977 14 SGITQLMDDLNDGL---RTPGAIMLGGGNPAR------IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALA 84 (417)
T ss_pred hhHHHHHHHHHhhc---cCCCceeeCCCCccc------ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHH
Confidence 57999998887766 456699999999863 3455554443 33332 2458999999999999999
Q ss_pred HHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC---CC--CEEEEc-CCCCcchHHHHhhCCCeEEE---EeccCCCC
Q 020968 98 DYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR---PG--ANILLP-RPGFPYYEARATHSHLEVRH---FDLLPAKG 168 (319)
Q Consensus 98 ~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~---~g--d~Vl~~-~p~~~~~~~~~~~~g~~~~~---~~~~~~~~ 168 (319)
.++++.+|+++..++|.+|+|++.+.+-++..+.. .| .+|+.+ .|.|.+|..+.-.-.+=+.. ++..+.+-
T Consensus 85 ~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~ 164 (417)
T COG3977 85 KMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQ 164 (417)
T ss_pred HHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccc
Confidence 99999999999999999999999999988887742 34 466665 59998886554322211111 12222222
Q ss_pred --CcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc----C
Q 020968 169 --WEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF----G 242 (319)
Q Consensus 169 --~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~----~ 242 (319)
|.+|.+.+. +.+++.+|+++.|.||||.+++.+|+.++..++++||+.+|+|.+|+. +++.+-.- .
T Consensus 165 FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~------PFP~iifsd~~~~ 236 (417)
T COG3977 165 FKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV------PFPGIIFSDATPL 236 (417)
T ss_pred eeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC------CCCceeccccccc
Confidence 566776655 346788999999999999999999999999999999999999999985 22222111 1
Q ss_pred CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcccccc
Q 020968 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKRNSFL 314 (319)
Q Consensus 243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~ 314 (319)
=.+|+|.|.|+||. |+||.|+|.+++. +++++.+...... +..+.++.+..++. ++++.+..
T Consensus 237 w~~NiilC~SLSK~-GLPG~R~GIiIan--------e~viqaitnmn~iisLap~~~G~Aia~~-mie~gdl~ 299 (417)
T COG3977 237 WNENIILCMSLSKL-GLPGSRCGIIIAN--------EKVIQAITNMNGIISLAPGRMGPAIAAE-MIESGDLL 299 (417)
T ss_pred CCCCEEEEeehhhc-CCCCcceeEEEcc--------HHHHHHHHhccceeeecCCCccHHHHHH-HhhcchHH
Confidence 13689999999999 9999999999973 4688888877663 45667788887777 55554443
No 109
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=7e-26 Score=197.84 Aligned_cols=280 Identities=21% Similarity=0.230 Sum_probs=212.0
Q ss_pred HHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCC-CCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHH
Q 020968 19 ELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGD-PSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIA 97 (319)
Q Consensus 19 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 97 (319)
++...+++.|.++.+.+.+ .+.++.|||++|. .+.....+..+.+.+|-+..........|-|..|.+++++.++
T Consensus 4 ~i~~~p~DpIlgL~e~f~~----D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~ 79 (396)
T COG1448 4 KIEAAPADPILGLKEAFKA----DPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQ 79 (396)
T ss_pred ccccCCCCchhHHHHHHhc----CCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHH
Confidence 5667788899998887754 4588999999994 3333446778888888888777777778999999999999999
Q ss_pred HHHhhhCCCC---CCCCcE--EEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCc
Q 020968 98 DYLNRDLPYK---LSPDDV--YLTLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWE 170 (319)
Q Consensus 98 ~~~~~~~g~~---~~~~~i--~~~~G~t~ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 170 (319)
+++ +|.. +..+++ +=|.|||.|+..++..+. .+..+|++++|+|+++..++...|+++..++..+..+-.
T Consensus 80 ~ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~ 156 (396)
T COG1448 80 KLL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKG 156 (396)
T ss_pred HHh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeecccccccc
Confidence 999 5433 444555 568999999999988774 356779999999999999999999999999987766667
Q ss_pred CCHHHHHhhhcc--CceEEEEc-CCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC-CCcccC-CCC
Q 020968 171 VDLDAVEALADE--NTVALVII-NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV-PMGVFG-SIV 245 (319)
Q Consensus 171 ~d~~~l~~~l~~--~~~~v~l~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~-~~~ 245 (319)
+|.+.+...++. ....|++- .+|||||.-++.++|++|+++.++++.+.+.|-||++|..+-.+.. .+..+. ...
T Consensus 157 ~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~ 236 (396)
T COG1448 157 LDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGP 236 (396)
T ss_pred ccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCC
Confidence 999988877753 22344333 4499999999999999999999999999999999999876532211 122221 223
Q ss_pred CeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH----HHHh-hhhcCCcchHHHHHHHHHHhccc
Q 020968 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS----IKSF-LNISSDPATFIQFLKSSRKLKRN 311 (319)
Q Consensus 246 ~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~q~~~~~~l~~~~ 311 (319)
.+++..|+||.|++.|.|+|.+.+..++ .+...+ ++.. ++.+++||.-.-..++. +++++
T Consensus 237 ~~lva~S~SKnfgLYgERVGa~~vva~~-----~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~-IL~~p 301 (396)
T COG1448 237 ELLVASSFSKNFGLYGERVGALSVVAED-----AEEADRVLSQLKAIIRTNYSNPPAHGAAVVAT-ILNNP 301 (396)
T ss_pred cEEEEehhhhhhhhhhhccceeEEEeCC-----HHHHHHHHHHHHHHHHhccCCCchhhHHHHHH-HhCCH
Confidence 4899999999999999999998654433 234444 3333 33466666666666666 55544
No 110
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=2e-25 Score=194.11 Aligned_cols=268 Identities=27% Similarity=0.436 Sum_probs=207.4
Q ss_pred HHHHHHHhhhc---CCCCeEeccCCCCCCCCC---------------------CCCcHHHHHHHHHHhhcC--CCCCCCC
Q 020968 32 LNSLLENLNKN---DTRPLIPLGHGDPSAFPS---------------------FRTASVAVDAIVHSVRSA--RFNCYSS 85 (319)
Q Consensus 32 ~~~~~~~~~~~---~~~~~i~l~~g~~~~~~~---------------------~~~~~~~~~a~~~~~~~~--~~~~Y~~ 85 (319)
...+++.++++ +=+++|+-++|+|....+ ...|..+++...+.+... ....|+.
T Consensus 32 A~El~~eL~~~~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~lLd~~~fp~Dai~RA~~~L~~~gGs~GaYS~ 111 (475)
T KOG0258|consen 32 ADELEKELKKGVKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPELLDSPEFPTDAIKRAKRILNDCGGSLGAYSD 111 (475)
T ss_pred HHHHHHHHHhcccCChHHHHhhcCCCHHHhCCCChhHHHHHHHHhcChhhcCCCCCCHHHHHHHHHHHHhcCCccccccc
Confidence 34455555543 234588888888742111 123344444445555432 4568999
Q ss_pred CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (319)
Q Consensus 86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 164 (319)
+.|++-+|+.+|+|+.++.|...++++|++|.|++.|+..++..++ .+.+.|++|-|.|+-|...+..+|...+.+.++
T Consensus 112 SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v~YyLd 191 (475)
T KOG0258|consen 112 SQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQVPYYLD 191 (475)
T ss_pred ccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCcccceeec
Confidence 9999999999999999999988999999999999999999999886 467999999999999999999999999999999
Q ss_pred CCCCCcCCHHHHHhhhcc-----CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC-CCCCC
Q 020968 165 PAKGWEVDLDAVEALADE-----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT-PFVPM 238 (319)
Q Consensus 165 ~~~~~~~d~~~l~~~l~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~~~ 238 (319)
++++|.+|.++|++.+++ +++++++.||.||||.+++.+.+++|+++|.+++++++-||+|++.+|.+. .++++
T Consensus 192 Ee~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSf 271 (475)
T KOG0258|consen 192 EESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSF 271 (475)
T ss_pred cccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhH
Confidence 999999999999998754 568899999999999999999999999999999999999999999988653 55544
Q ss_pred ccc----C----CCCCeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHH
Q 020968 239 GVF----G----SIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKS 304 (319)
Q Consensus 239 ~~~----~----~~~~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 304 (319)
... . +...++.++|.||.+.. -|.|-||+-.-+- .++....+.+..+...+++...|...-
T Consensus 272 KKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~-----~prv~~qi~Kl~si~lc~~V~GQ~~vd 341 (475)
T KOG0258|consen 272 KKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNR-----DPRVKQQIKKLASIKLCPQVSGQKLVD 341 (475)
T ss_pred HHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccC-----ChhHHHHHHHHHhhhhcCCccchhhhc
Confidence 331 1 12236888999999866 6999999965432 245666666665543445555555443
No 111
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.93 E-value=1.2e-24 Score=201.10 Aligned_cols=223 Identities=16% Similarity=0.161 Sum_probs=172.8
Q ss_pred CCCCeEeccCCCC--CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 43 DTRPLIPLGHGDP--SAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 43 ~~~~~i~l~~g~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
.+-+++.|..+++ +......+ ..+.++...++..+. ..|+++.|..+||+++++++ ..+++++|+|++
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t-~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~--------g~~~vv~t~~Gt 78 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGT-GAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLF--------GFKHIIPTHQGR 78 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCc-HHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHH--------CCCeEEEcCCHH
Confidence 4889999999998 53222222 355555555554443 36999999999999999999 346899999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC--------CcCCHHHHHhhhccC----ceEEE
Q 020968 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG--------WEVDLDAVEALADEN----TVALV 188 (319)
Q Consensus 121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~d~~~l~~~l~~~----~~~v~ 188 (319)
+|+..++.+++++||.| +++|.|..+...+...|.+++.+++++..+ +.+|+++|++++.++ +++|+
T Consensus 79 ~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~ 157 (431)
T cd00617 79 GAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIV 157 (431)
T ss_pred HHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEE
Confidence 99999999999999987 689999999989999999999999875432 449999999999765 67899
Q ss_pred EcCCCCcc-ccccCHHHHHHHHHHHHHcCCEEEEeCCCCC--ccC-----CCCCCCCCcccCCCCCeEEEecCccccCCC
Q 020968 189 IINPGNPC-GNVYTYQHLQKIAETAKKLGIMVIADEVYDH--LAF-----GNTPFVPMGVFGSIVPVLTLGSISKRWIVP 260 (319)
Q Consensus 189 l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~--~~~-----~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~ 260 (319)
+++|+||+ |.+++.+++++|.++|+++|++||+|++... ..+ ++....++. +.++.++|++|.+.+.
T Consensus 158 v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~-----ei~~e~~s~sd~~~mS 232 (431)
T cd00617 158 LTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA-----EIAREMFSYADGCTMS 232 (431)
T ss_pred EECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH-----HHHHHhhccCCEEEEE
Confidence 99999998 9999999999999999999999999999542 222 121122222 1134567788888778
Q ss_pred cce------eeEEEeeCCCCCccchHHHHHHHHh
Q 020968 261 GWR------LGWLVTSDPNGILQDSGIVDSIKSF 288 (319)
Q Consensus 261 G~r------~G~i~~~~~~~~~~~~~~~~~~~~~ 288 (319)
|+| .||++++++ ++.++++.+
T Consensus 233 ~~K~~~~~~GG~i~~~d~-------~l~~~~~~~ 259 (431)
T cd00617 233 AKKDGLVNIGGFLALRDD-------ELYEEARQR 259 (431)
T ss_pred eecCCCCccceEEEeCcH-------HHHHHHHHh
Confidence 777 568888652 477877754
No 112
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.92 E-value=3e-23 Score=192.27 Aligned_cols=213 Identities=16% Similarity=0.153 Sum_probs=162.7
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc---CC----HHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV---GI----LPARRAIADYLNRDLPYKLSPDDVYL 115 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~---g~----~~lr~~ia~~~~~~~g~~~~~~~i~~ 115 (319)
.+.++|+|+.|++ +.+..+|.+.+++.+++..... .|++.. |. .++|+++|++++ .+++++
T Consensus 36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~~-~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii 103 (393)
T TIGR01822 36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHGF-GMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL 103 (393)
T ss_pred CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhCC-CCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence 4678999999984 3478889999999998876332 565554 65 788999998883 357888
Q ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEE
Q 020968 116 TLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVI 189 (319)
Q Consensus 116 ~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l 189 (319)
++|+++|+..++.+++++||.|+++.|.|+.+...++..+.+...+. ..|++++++.+++ ++++|++
T Consensus 104 ~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~ 176 (393)
T TIGR01822 104 YASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIAT 176 (393)
T ss_pred ECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEE
Confidence 89999999999999999999999999999998888887777664432 3689999888764 6678888
Q ss_pred cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC--CCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT--PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (319)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i 267 (319)
.+++||||.+.+ +++|+++|+++|+++|+|++|+....+.. ......... .+..++++|+||++ +|+|+||+
T Consensus 177 ~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l--~g~r~G~~ 250 (393)
T TIGR01822 177 DGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKAL--GGASGGFT 250 (393)
T ss_pred eCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHh--hCCCcEEE
Confidence 889999999955 89999999999999999999964332211 111111111 13469999999985 57899999
Q ss_pred EeeCCCCCccchHHHHHHHHh
Q 020968 268 VTSDPNGILQDSGIVDSIKSF 288 (319)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~ 288 (319)
+++. ++++.++..
T Consensus 251 ~~~~--------~~~~~l~~~ 263 (393)
T TIGR01822 251 TARK--------EVVELLRQR 263 (393)
T ss_pred EeCH--------HHHHHHHHh
Confidence 8753 477777654
No 113
>PRK07049 methionine gamma-lyase; Validated
Probab=99.91 E-value=9.6e-23 Score=189.61 Aligned_cols=194 Identities=15% Similarity=0.183 Sum_probs=151.6
Q ss_pred CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCC
Q 020968 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHL 156 (319)
Q Consensus 81 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~ 156 (319)
.+|+ ++....|++.+|++. ..+++++++|+++|+..++.+++++||+|+++.|.|..+...+ ...|+
T Consensus 78 ~R~~-~Pt~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 78 SRFN-HPNSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred cCCC-CcCHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 4555 345689999999998 3457999999999999999999999999999999999986653 56788
Q ss_pred eEEEEeccCCCCCcCCHHHHHhhhc-----cCceEEEEcCCCCccccccCHHHHHHHHHHHHH---cCCEEEEeCCCCCc
Q 020968 157 EVRHFDLLPAKGWEVDLDAVEALAD-----ENTVALVIINPGNPCGNVYTYQHLQKIAETAKK---LGIMVIADEVYDHL 228 (319)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~l~-----~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~---~~~~li~D~a~~~~ 228 (319)
+++.++. ..|++.+++.+. +++++|++++|+||||.+++.+++.++++.|+. +++++|+|++|...
T Consensus 149 ~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~ 222 (427)
T PRK07049 149 GAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP 222 (427)
T ss_pred EEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc
Confidence 8666652 246777776653 468999999999999999999999999888654 68999999998764
Q ss_pred cCCCCCCCCCcccCCCCCeEEEecCccccC-CCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968 229 AFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS 305 (319)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~ 305 (319)
... .++ ..+..|++.|+||.++ .+|+|+||++++. +++++++..+.. ....+++.|+++..
T Consensus 223 ~~~----~pl----~~g~divv~S~SK~~gG~~glr~G~vv~~~--------~l~~~l~~~~~~~g~~ls~~~a~l~~r 285 (427)
T PRK07049 223 VFQ----KPL----EHGADLSVYSLTKYVGGHSDLVAGAVLGRK--------ALIRQVRALRSAIGTQLDPHSCWMLGR 285 (427)
T ss_pred ccC----Ccc----ccCCCEEEEcCceeecCCCCcEEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 321 122 1134599999999999 5999999999743 577777776654 45678888887665
No 114
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=2.3e-23 Score=189.03 Aligned_cols=221 Identities=14% Similarity=0.120 Sum_probs=161.3
Q ss_pred CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 020968 61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP 140 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~ 140 (319)
+++++.+++++.+..... ..|++.....++++.+++++ + ++++++++|+++++..++.+++++||+|+++
T Consensus 8 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~------g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~ 77 (338)
T cd06502 8 TGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF------G--KEAALFVPSGTAANQLALAAHTQPGGSVICH 77 (338)
T ss_pred CCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh------C--CCeEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence 478899999998765432 25766667788888888887 2 5678888888999999999999999999999
Q ss_pred CCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-------CceEEEEcCCCCccccccCHHHHHHHHH
Q 020968 141 RPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------NTVALVIINPGNPCGNVYTYQHLQKIAE 210 (319)
Q Consensus 141 ~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~l~~p~nptG~~~~~~~l~~i~~ 210 (319)
.|+|..+.. .+...|++++.++.+ .+.+|++++++++++ ++++|++++|+|| |.+++.+++++|++
T Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~ 153 (338)
T cd06502 78 ETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISA 153 (338)
T ss_pred cCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHH
Confidence 999976432 345689998888763 257999999999864 6789999999997 66779999999999
Q ss_pred HHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968 211 TAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 211 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 290 (319)
+|+++|+++|+|++|..+....... ++........ +++.|+||+|+++| |+++..+ ++++++++....
T Consensus 154 ~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~-------~~~~~~~~~~~~ 221 (338)
T cd06502 154 LAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGN-------RDFIARARRRRK 221 (338)
T ss_pred HHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECC-------HHHHHHHHHHHH
Confidence 9999999999999986432111111 2222212222 56889999999887 5554333 257777776543
Q ss_pred h---cCCcchHHHHHHHHHH
Q 020968 291 I---SSDPATFIQFLKSSRK 307 (319)
Q Consensus 291 ~---~~~~~~~~q~~~~~~l 307 (319)
. ....+.+.|.++..++
T Consensus 222 ~~~~~~~~~~~~~~a~~~~L 241 (338)
T cd06502 222 QAGGGMRQSGFLAAAGLAAL 241 (338)
T ss_pred HhCCChhhHHHHHHHHHHHh
Confidence 2 2234556666665533
No 115
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.91 E-value=1.3e-22 Score=188.09 Aligned_cols=218 Identities=14% Similarity=0.094 Sum_probs=162.6
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
.+.++|+|+.|++ +.++.++.+.+++.+.+..... ..|....|..++++++++++.+.+|. +++|++|+| +
T Consensus 40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~ 112 (397)
T PRK06939 40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-F 112 (397)
T ss_pred CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-H
Confidence 4678999999973 2267889999999988765322 12222457888899998888887663 367888887 7
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCC
Q 020968 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGN 194 (319)
Q Consensus 121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~n 194 (319)
+++..++++++++||.|++++|+|+.+...++..|.+++.++. .|++.+++.+++ ++++|+..+.+|
T Consensus 113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~ 185 (397)
T PRK06939 113 DANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFS 185 (397)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence 7888899999999999999999999998888888988876653 478888887753 556677666789
Q ss_pred ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC--CCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (319)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~ 272 (319)
++|.. .++++|.++|+++|++||+||+|....++ +........+. .+.+++++|+||++ +|+|+||++++.
T Consensus 186 ~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~--~g~r~G~v~~~~- 258 (397)
T PRK06939 186 MDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKAL--GGASGGYTAGRK- 258 (397)
T ss_pred CCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHh--CccCceEEEeCH-
Confidence 99987 56999999999999999999999632222 11111111121 13469999999997 356999999853
Q ss_pred CCCccchHHHHHHHHh
Q 020968 273 NGILQDSGIVDSIKSF 288 (319)
Q Consensus 273 ~~~~~~~~~~~~~~~~ 288 (319)
++++.++..
T Consensus 259 -------~~~~~l~~~ 267 (397)
T PRK06939 259 -------EVIDWLRQR 267 (397)
T ss_pred -------HHHHHHHHh
Confidence 477777654
No 116
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.91 E-value=2.1e-22 Score=186.10 Aligned_cols=236 Identities=14% Similarity=0.162 Sum_probs=174.6
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
.+.++++|+.|++ +.+++++.+.+++.+++.... ...|....|..++++++++++.+..|. ++.+++++| +
T Consensus 31 ~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG-~ 103 (385)
T TIGR01825 31 NGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSG-F 103 (385)
T ss_pred CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcH-H
Confidence 4678999999863 236788999999998876432 335767778999999999999887662 456777777 5
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCCCCcc
Q 020968 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPGNPC 196 (319)
Q Consensus 121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~npt 196 (319)
+++..++.+++++||.|+++.|.|..+...+...|.++..++ .+|++++++.+.+ +++++++.+++|||
T Consensus 104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~t 176 (385)
T TIGR01825 104 NTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMD 176 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCC
Confidence 667788888899999999999999998877778888776543 3688888887653 56788888889999
Q ss_pred ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCC--cccCCCCCeEEEecCccccCCCcceeeEEEeeCCCC
Q 020968 197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM--GVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG 274 (319)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~ 274 (319)
|.+.+ +++|.++|+++|+++|+||+|..+.++....... ..+. .+.++++.|+||+++++| ||++++.
T Consensus 177 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~~--- 246 (385)
T TIGR01825 177 GDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGHK--- 246 (385)
T ss_pred CCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecCH---
Confidence 99866 8899999999999999999998765542111111 1122 356899999999997766 9988743
Q ss_pred CccchHHHHHHHHhhh-h--cCCcchHHHHHHHHHH
Q 020968 275 ILQDSGIVDSIKSFLN-I--SSDPATFIQFLKSSRK 307 (319)
Q Consensus 275 ~~~~~~~~~~~~~~~~-~--~~~~~~~~q~~~~~~l 307 (319)
++++.+..... . ....++..|.++..++
T Consensus 247 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 277 (385)
T TIGR01825 247 -----ELIEYLKNRARPFLFSTAQPPAVVAALAAAV 277 (385)
T ss_pred -----HHHHHHHHhCccccccCCCCHHHHHHHHHHH
Confidence 46777765432 1 2234556666655544
No 117
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.91 E-value=2.2e-22 Score=182.51 Aligned_cols=214 Identities=15% Similarity=0.106 Sum_probs=156.2
Q ss_pred CCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 020968 59 PSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138 (319)
Q Consensus 59 ~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl 138 (319)
..+.-.|.+.++..+.++... ++...+.+|++.+|+++ +++++++++++|+++++..++.+++++||+|+
T Consensus 30 lgl~~~~~~~~~~~~~~~~~~----g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vl 99 (346)
T TIGR03576 30 TGLAGGFKIDEEDLELLETYV----GPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRKVV 99 (346)
T ss_pred ccCCCChhHHHHHHHHHHHhc----CCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCEEE
Confidence 334556778888877765421 22234566777777776 34678999999999999999999999999999
Q ss_pred Ec---CCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968 139 LP---RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (319)
Q Consensus 139 ~~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (319)
++ .|.|..|...++..|.++..+ .+++.++. .+++++|+++ +++++|.+++.+++++|+++|+++
T Consensus 100 i~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~ 167 (346)
T TIGR03576 100 HYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK 167 (346)
T ss_pred ECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc
Confidence 75 478988989999999876322 24444433 2356777774 578999999999999999999999
Q ss_pred CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCC
Q 020968 216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSD 294 (319)
Q Consensus 216 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 294 (319)
|+++++||+|+.+..+.....+...+. ..+++.|+|| +++|+|+||++++. ++++.++..... ..+
T Consensus 168 ~~~livDEAy~~~~~~~~~~~~~~~~~---~divv~s~SK--alaG~r~G~v~~~~--------~li~~l~~~~~~~~~s 234 (346)
T TIGR03576 168 EAIVLVDDASGARVRRLYGQPPALDLG---ADLVVTSTDK--LMDGPRGGLLAGRK--------ELVDKIKSVGEQFGLE 234 (346)
T ss_pred CCEEEEECCccccccccCCCCCHHHcC---CcEEEeccch--hccccceEEEEeCH--------HHHHHHHHhhcCcccC
Confidence 999999999998653211111222222 2267789999 48999999999853 588888877653 334
Q ss_pred cchHHHHHHHHHH
Q 020968 295 PATFIQFLKSSRK 307 (319)
Q Consensus 295 ~~~~~q~~~~~~l 307 (319)
.+++.|.++..++
T Consensus 235 ~~~~~~~aa~~aL 247 (346)
T TIGR03576 235 AQAPLLAAVVRAL 247 (346)
T ss_pred ccHHHHHHHHHHH
Confidence 5777887777655
No 118
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.91 E-value=2.3e-22 Score=183.89 Aligned_cols=214 Identities=14% Similarity=0.152 Sum_probs=157.1
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCCCCc----CCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTV----GILPARRAIADYLNRDLPYKLSPDDVYLT 116 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~----g~~~lr~~ia~~~~~~~g~~~~~~~i~~~ 116 (319)
.+..+|+|+.|+|- .++.++.+.+++.+++..... ..|.... ...++++++++++. .++.++++
T Consensus 14 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~ 83 (360)
T TIGR00858 14 DGRRLLNFSSNDYL---GLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFS 83 (360)
T ss_pred CCceEEecccCCcc---cCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 47789999999641 245678999999988765221 1122122 34457777777762 24677777
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCC
Q 020968 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINP 192 (319)
Q Consensus 117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p 192 (319)
+|+ +++..++.+++++||+|+++.|+|..+...++..|.++..++. +|++.+++.++. +++++++.++
T Consensus 84 ~G~-~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~ 155 (360)
T TIGR00858 84 SGY-LANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGV 155 (360)
T ss_pred chH-HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCC
Confidence 775 4455577888899999999999999998888999998877653 588889888764 3577888888
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC--CCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF--VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
+||+|...+ +++|.++|+++|+++|+||+|..+.++.... .....+...+++|+++|+||+|+++| ||++++
T Consensus 156 ~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~ 229 (360)
T TIGR00858 156 FSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS 229 (360)
T ss_pred ccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC
Confidence 999998854 8999999999999999999998765543211 22222334567899999999998877 999875
Q ss_pred CCCCCccchHHHHHHHHh
Q 020968 271 DPNGILQDSGIVDSIKSF 288 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~ 288 (319)
. ++++.++..
T Consensus 230 ~--------~~~~~~~~~ 239 (360)
T TIGR00858 230 Q--------ALIDYLINR 239 (360)
T ss_pred H--------HHHHHHHHh
Confidence 3 466666543
No 119
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.90 E-value=5.1e-22 Score=184.49 Aligned_cols=202 Identities=18% Similarity=0.180 Sum_probs=156.4
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC-CCCC-------CcCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSS-------TVGILPARRAIADYLNRDLPYKL-SPDDVYL 115 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~-------~~g~~~lr~~ia~~~~~~~g~~~-~~~~i~~ 115 (319)
++.+.|+.+..+ ++++.+.+++.+.+...... ..+. ...++++|+.+++++ +. ++++|++
T Consensus 18 ~~~~yld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~ 86 (401)
T PRK10874 18 DAGVYLDSAATA-----LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL------NAPDAKNIVW 86 (401)
T ss_pred CceEEEeCCccc-----CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CCCCCCEEEE
Confidence 468999999854 56788999998887542110 0000 112567888888887 34 6789999
Q ss_pred eCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968 116 TLGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (319)
Q Consensus 116 ~~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 187 (319)
|+|++++++++++++ .++||+|+++++.|++ +...++..|.+++.++.+. ++.+|++++++.++++++++
T Consensus 87 ~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv 164 (401)
T PRK10874 87 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRIL 164 (401)
T ss_pred ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEE
Confidence 999999999999998 3789999999999864 4566788899999998753 46789999999998899999
Q ss_pred EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (319)
Q Consensus 188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i 267 (319)
++++|+||||.+++ +++|+++|+++|+++++|++|....+ +..+... +..+++.|++|.|+.+| +||+
T Consensus 165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~----~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l 232 (401)
T PRK10874 165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF----PADVQAL---DIDFYAFSGHKLYGPTG--IGVL 232 (401)
T ss_pred EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc----cCCchhc---CCCEEEEecccccCCCc--cEEE
Confidence 99999999999976 78999999999999999999965222 2223222 23488899999987777 5888
Q ss_pred EeeC
Q 020968 268 VTSD 271 (319)
Q Consensus 268 ~~~~ 271 (319)
++++
T Consensus 233 ~~~~ 236 (401)
T PRK10874 233 YGKS 236 (401)
T ss_pred EEch
Confidence 8743
No 120
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.90 E-value=2.5e-22 Score=186.36 Aligned_cols=203 Identities=17% Similarity=0.162 Sum_probs=156.7
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC-CCCCCC-------cCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-NCYSST-------VGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~-------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~ 116 (319)
++++.|+.+.-+ ++|+.+.+++.+.+..... ..++.. ...+++|+.++++++. . ++++|++|
T Consensus 15 ~~~iyld~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~----~-~~~~i~~t 84 (398)
T TIGR03392 15 DGTVYLDSAATA-----LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNA----P-DAENIVWT 84 (398)
T ss_pred CCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCC----C-CCCeEEEe
Confidence 468999999855 5678899999887653211 112221 1245788888888832 1 46899999
Q ss_pred CCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEE
Q 020968 117 LGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV 188 (319)
Q Consensus 117 ~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~ 188 (319)
+|++++++.++.++ .++||+|++++|.|++ +...++..|++++.++.+. ++.+|++.+++++++++++++
T Consensus 85 ~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv~ 162 (398)
T TIGR03392 85 RGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRILA 162 (398)
T ss_pred CChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEEE
Confidence 99999999999988 4789999999999865 4556788999999998753 356899999999988899999
Q ss_pred EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (319)
Q Consensus 189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~ 268 (319)
+++|+||||.+.+ +++|+++|+++|+++++|++|+...+ +..+.... ..+++.|++|.++.+| +||++
T Consensus 163 i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~---~d~~~~s~~K~~gp~G--~G~l~ 230 (398)
T TIGR03392 163 LGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALD---IDFYAFSGHKLYGPTG--IGVLY 230 (398)
T ss_pred EECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcC---CCEEEEecccccCCCc--eEEEE
Confidence 9999999999976 78899999999999999999975322 22222222 2378889999887666 89998
Q ss_pred eeC
Q 020968 269 TSD 271 (319)
Q Consensus 269 ~~~ 271 (319)
+++
T Consensus 231 ~~~ 233 (398)
T TIGR03392 231 GKT 233 (398)
T ss_pred EcH
Confidence 753
No 121
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.90 E-value=2.6e-22 Score=183.83 Aligned_cols=202 Identities=15% Similarity=0.138 Sum_probs=155.4
Q ss_pred CCCcHHHHHHHHHHhhcCCC-------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCC
Q 020968 61 FRTASVAVDAIVHSVRSARF-------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP 133 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~ 133 (319)
-+..+++.+++.+....... ..+...+-..++++.+++++ ++ +++++++|+++++..++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~--~~i~~~~g~t~al~~~l~~~~~~ 82 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL------GM--DEARVTPGAREGKFAVMHSLCEK 82 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc------CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence 46778888988887632110 01111224568888888887 23 78999999999999999999999
Q ss_pred CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-------cCceEEEEcCCCCccccccCHHHHH
Q 020968 134 GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-------ENTVALVIINPGNPCGNVYTYQHLQ 206 (319)
Q Consensus 134 gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~~~v~l~~p~nptG~~~~~~~l~ 206 (319)
||+|+++.+.|......++..|++++.++.+...+|.+|++.++++++ ++++++++++|+||||.. .+++
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~~~ 159 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HDAK 159 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---ccHH
Confidence 999999999887766778999999999998765557899999998885 267899999999999998 5588
Q ss_pred HHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHH
Q 020968 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIK 286 (319)
Q Consensus 207 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~ 286 (319)
+|.++|+++|+++|+|++|.... .+.....+ +..++++|+||+++. +.|+||+++++ +++++++
T Consensus 160 ~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~---~~d~~~~s~~K~l~~-~~~~G~l~~~~--------~~~~~l~ 223 (361)
T cd06452 160 KIAKVCHEYGVPLLLNGAYTVGR----MPVSGKEL---GADFIVGSGHKSMAA-SAPIGVLATTE--------EWADIVF 223 (361)
T ss_pred HHHHHHHHcCCeEEEECCcccCC----cCCCHHHc---CCCEEEecCCccccC-CCCeEEEEECH--------HHHHHHh
Confidence 99999999999999999998521 11122222 235999999999864 55999999853 4677765
Q ss_pred Hhh
Q 020968 287 SFL 289 (319)
Q Consensus 287 ~~~ 289 (319)
...
T Consensus 224 ~~~ 226 (361)
T cd06452 224 RTS 226 (361)
T ss_pred ccc
Confidence 543
No 122
>PLN02242 methionine gamma-lyase
Probab=99.89 E-value=4.2e-22 Score=184.70 Aligned_cols=185 Identities=18% Similarity=0.212 Sum_probs=145.1
Q ss_pred CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH-----hhCCCeEEE
Q 020968 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA-----THSHLEVRH 160 (319)
Q Consensus 86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~-----~~~g~~~~~ 160 (319)
++...+|++.+++++ ..+.+++++|+++|+..++.+++++||+|+++.|.|..+...+ +..|.++..
T Consensus 75 ~Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~ 146 (418)
T PLN02242 75 NPTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTF 146 (418)
T ss_pred ChhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEE
Confidence 456789999999988 4567889999999999999999999999999999998876554 346777766
Q ss_pred EeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc
Q 020968 161 FDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG 239 (319)
Q Consensus 161 ~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~ 239 (319)
++. .|++.+++++++ ++++|++++|+||||.+. ++++|+++|+++|++||+|++|..+.++. .
T Consensus 147 ~d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~------~ 210 (418)
T PLN02242 147 VDI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP------A 210 (418)
T ss_pred cCC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH------H
Confidence 654 389999999987 489999999999999996 48999999999999999999998765421 1
Q ss_pred ccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHHhhh---hcCCcchHHHHHHHH
Q 020968 240 VFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLN---ISSDPATFIQFLKSS 305 (319)
Q Consensus 240 ~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~q~~~~~ 305 (319)
.+ +..|+++|+||.++++|+++ ||++++. +++++++..+. ...+++...|.+...
T Consensus 211 ~~---g~divv~S~SK~l~g~g~~~gG~iv~~~--------~li~~l~~~~~~~~~~~g~~~~~~~A~l~ 269 (418)
T PLN02242 211 RL---GADVVVHSISKFISGGADIIAGAVCGPA--------ELVNSMMDLHHGALMLLGPTMNPKVAFEL 269 (418)
T ss_pred Hc---CCcEEEEeCccccCCCCCceEEEEEcCH--------HHHHHHHHHhhhhhhccCCCCCHHHHHHH
Confidence 11 24599999999999999885 8888643 47777775533 123445556655544
No 123
>PLN02822 serine palmitoyltransferase
Probab=99.89 E-value=7.3e-22 Score=186.41 Aligned_cols=240 Identities=13% Similarity=0.118 Sum_probs=171.0
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~ 116 (319)
.+.+++||+.+++- .+..++.+.+++.++++.... ..|++..++.+|++++++++. .++.|+++
T Consensus 107 ~G~~~id~~s~~~l---gl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s 176 (481)
T PLN02822 107 NGKDVVNFASANYL---GLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS 176 (481)
T ss_pred CCceEEEeECCCcC---CCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 46789999999753 366789999999999876322 135666678999999999983 35678888
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh--ccCc-eEEEEcCCC
Q 020968 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA--DENT-VALVIINPG 193 (319)
Q Consensus 117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l--~~~~-~~v~l~~p~ 193 (319)
+|.+ ++..++.+++++||.|++....|..+...+...+.+++.++.++.+++..+++++++.. .+++ ++|++..++
T Consensus 177 ~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~ 255 (481)
T PLN02822 177 YGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY 255 (481)
T ss_pred CHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence 8776 67889999999999999988888777778888888888887643323333333333221 1234 677888889
Q ss_pred CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc--ccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG--VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+++|.+++ +++|+++|++||+++|+||+|+...++........ .+...+..|++.||||+|+++| ||++++.
T Consensus 256 ~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~ 329 (481)
T PLN02822 256 QNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSA 329 (481)
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCH
Confidence 99999987 89999999999999999999997666532211111 1112245699999999999888 9999753
Q ss_pred CCCCccchHHHHHHHHhhh-h-cC-CcchHHHHHHHHHH
Q 020968 272 PNGILQDSGIVDSIKSFLN-I-SS-DPATFIQFLKSSRK 307 (319)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~q~~~~~~l 307 (319)
++++.++.... . ++ +.++..|.++..++
T Consensus 330 --------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL 360 (481)
T PLN02822 330 --------RVVDHQRLSSSGYVFSASLPPYLASAAITAI 360 (481)
T ss_pred --------HHHHHHHhcCCceeeccccCHHHHHHHHHHH
Confidence 47777664332 2 22 23466666655544
No 124
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.89 E-value=1.9e-21 Score=180.98 Aligned_cols=203 Identities=22% Similarity=0.242 Sum_probs=155.7
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC-C-------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS-S-------TVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~-~-------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~ 116 (319)
.+++.|+.+.-. ++++.+.+++.+.+.....+... . ....+++|+.++++++. .++++|++|
T Consensus 22 ~~~iYld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t 91 (406)
T PRK09295 22 LPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFV 91 (406)
T ss_pred CceEEEeCcccc-----cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEe
Confidence 368999999854 67788999998887642211111 1 01245788888888732 156899999
Q ss_pred CCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEE
Q 020968 117 LGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV 188 (319)
Q Consensus 117 ~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~ 188 (319)
+|++++++.++.++ +++||+|+++++.|++ +...++..|++++.++.+. ++.+|++++++++++++++++
T Consensus 92 ~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~ 169 (406)
T PRK09295 92 RGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLLA 169 (406)
T ss_pred CCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEE
Confidence 99999999999874 5789999999988764 4556678899999998753 456899999999988899999
Q ss_pred EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (319)
Q Consensus 189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~ 268 (319)
+++|+||||.+++ +++|+++|+++|+++++|++|+... .+..+... +..+++.|++|.++.+| +||++
T Consensus 170 l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~---~~D~~~~s~~K~~gp~G--~G~l~ 237 (406)
T PRK09295 170 ITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQAL---DCDFYVFSGHKLYGPTG--IGILY 237 (406)
T ss_pred EecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc----cccCchhc---CCCEEEeehhhccCCCC--cEEEE
Confidence 9999999999977 7889999999999999999997632 22333322 23488899999877666 79998
Q ss_pred eeC
Q 020968 269 TSD 271 (319)
Q Consensus 269 ~~~ 271 (319)
+++
T Consensus 238 ~~~ 240 (406)
T PRK09295 238 VKE 240 (406)
T ss_pred Ech
Confidence 754
No 125
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.89 E-value=8.8e-22 Score=182.13 Aligned_cols=169 Identities=17% Similarity=0.191 Sum_probs=137.8
Q ss_pred CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEE
Q 020968 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRH 160 (319)
Q Consensus 85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~ 160 (319)
+.++..+|++++++++. .+++++++|+++|+..++.+++++||+|+++.|.|..+.. .++..|+++..
T Consensus 62 ~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 133 (400)
T PRK06234 62 GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTF 133 (400)
T ss_pred CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEE
Confidence 55688999999999983 3468899999999999999999999999999999976443 34678988888
Q ss_pred EeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc--CCEEEEeCCCCCccCCCCCCCCC
Q 020968 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPM 238 (319)
Q Consensus 161 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~ 238 (319)
++. .|++++++++++++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++|....+.. ++
T Consensus 134 vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~~----~l 199 (400)
T PRK06234 134 VDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQR----PL 199 (400)
T ss_pred ECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcCC----ch
Confidence 875 2889999999888999999999999999976 88888889886 99999999998765421 22
Q ss_pred cccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHH
Q 020968 239 GVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKS 287 (319)
Q Consensus 239 ~~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~ 287 (319)
. . +..|++.|+||.++++|+|+ ||+++++ +++++++.
T Consensus 200 ~-~---g~Divv~S~sK~l~g~g~~~gG~v~~~~--------~~~~~l~~ 237 (400)
T PRK06234 200 Q-L---GADVVVHSATKYLNGHGDVIAGFVVGKE--------EFINQVKL 237 (400)
T ss_pred h-h---CCcEEEeeccccccCCCCceeEEEEecH--------HHHHHHHH
Confidence 1 1 33499999999999999876 8888753 46666654
No 126
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.6e-22 Score=167.62 Aligned_cols=228 Identities=19% Similarity=0.311 Sum_probs=173.3
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+++++.++..+... .|.|..+ + +. ..|+. .-..+++.++++- -++.+++|+++-|+-+.|
T Consensus 40 G~~iv~ld~~e~~r---yPdP~q~-e-fk--------~~~~d-~rnk~ls~a~~~d------kpLt~dnic~GvGsDE~I 99 (375)
T KOG0633|consen 40 GRDIVKLDANENPR---YPDPEQM-E-FK--------YVYPD-PRNKRLSDALAQD------KPLTSDNICVGVGSDELI 99 (375)
T ss_pred CCCceEeccccCCC---CcCHHHc-c-cc--------cccCC-cccchhhhhcccC------CCCCccceEEecCcHHHH
Confidence 77899998887543 2333331 1 11 12332 2335666665543 167899999999999999
Q ss_pred HHHHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc--cCceEEEEcCCCCcccccc
Q 020968 124 EVILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD--ENTVALVIINPGNPCGNVY 200 (319)
Q Consensus 124 ~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~~ 200 (319)
.++++..+.|| ++|+.-.|+|.-|...+.-.+++++.++..+ +|.++.+.+.+.++ +.++.+++++|+||||..+
T Consensus 100 D~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~i 177 (375)
T KOG0633|consen 100 DLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSII 177 (375)
T ss_pred HHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCCCCCcccc
Confidence 99999999999 9999999999988888888999999999865 68899999999875 4678999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchH
Q 020968 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280 (319)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 280 (319)
..+++++|.+--. |.++++||+|.+|...+ ..+.....++|+++++++||+||++|+|+||...+- .
T Consensus 178 k~~di~KiLe~p~--nglVVvDEAYidFsg~~---S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~--------~ 244 (375)
T KOG0633|consen 178 KEDDILKILEMPD--NGLVVVDEAYIDFSGVE---SRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPL--------S 244 (375)
T ss_pred cHHHHHHHHhCCC--CcEEEEeeeeEeecccc---ccchHhHhCCceeehhhhhhhcCcceeEeecccccH--------H
Confidence 9999998887543 89999999999987533 234445677899999999999999999999998864 3
Q ss_pred HHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968 281 IVDSIKSFLNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~q~~~~~~l 307 (319)
+..-+.+....+ +.|.....++..++
T Consensus 245 ia~iln~~KaPY-NiS~~~s~~AL~Al 270 (375)
T KOG0633|consen 245 IAEILNRAKAPY-NISVAGSVAALAAL 270 (375)
T ss_pred HHHHHHhccCCc-cccchhHHHHHHhc
Confidence 555566655543 33444443333334
No 127
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.89 E-value=5.3e-21 Score=176.56 Aligned_cols=218 Identities=19% Similarity=0.206 Sum_probs=152.6
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
.+.++|+|+.+++ ..+.++|.+.+++.+++.... ...|....|...+++.+++.+.+.++ . ++.+++++++
T Consensus 37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~-~~~i~~~~g~ 109 (385)
T PRK05958 37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---A-ERALLFSSGY 109 (385)
T ss_pred CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---C-CcEEEECcHH
Confidence 5788999999863 225567899999998876522 11222222333444444444444333 2 3445555566
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc---CceEEEEcCCCCccc
Q 020968 121 QAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCG 197 (319)
Q Consensus 121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG 197 (319)
+++..++..++++||.|+++.|.|..+...+...|.+++.++. .|++.+++.+++ .+.++++.+++|++|
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G 182 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDG 182 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence 6777777888999999999999999998888888988887764 388899988864 245566667899999
Q ss_pred cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC--CCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCC
Q 020968 198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGI 275 (319)
Q Consensus 198 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~ 275 (319)
...+ +++|+++|+++|+++|+||+|+...++ +........+...+++|++.|+||+|+.+| ||++++.
T Consensus 183 ~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~---- 252 (385)
T PRK05958 183 DLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSE---- 252 (385)
T ss_pred CcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCH----
Confidence 8844 899999999999999999999765443 222222122334467899999999998877 8988753
Q ss_pred ccchHHHHHHHHh
Q 020968 276 LQDSGIVDSIKSF 288 (319)
Q Consensus 276 ~~~~~~~~~~~~~ 288 (319)
++.+.+...
T Consensus 253 ----~~~~~~~~~ 261 (385)
T PRK05958 253 ----TLIDYLINR 261 (385)
T ss_pred ----HHHHHHHHh
Confidence 466665543
No 128
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.89 E-value=6.2e-21 Score=175.25 Aligned_cols=201 Identities=16% Similarity=0.148 Sum_probs=150.1
Q ss_pred CCcHHHHHHHHHHhhcCCCCCCC-C------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCC
Q 020968 62 RTASVAVDAIVHSVRSARFNCYS-S------TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG 134 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~-~------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~g 134 (319)
.+.....+++.+.-......++. . .+-+.++++.+|+++ ..+.+++++|+++++..++.+++++|
T Consensus 19 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~--------g~~~~~i~~g~~~a~~~~~~~l~~~g 90 (370)
T TIGR02539 19 VLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFL--------GMDEARVTHGAREGKFAVMHALCKEG 90 (370)
T ss_pred CCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHh--------CCCceEEECChHHHHHHHHHHhhCCC
Confidence 45677777777664321111110 0 112467788888888 23467789999999999999999999
Q ss_pred CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-------CceEEEEcCCCCccccccCHHHHHH
Q 020968 135 ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------NTVALVIINPGNPCGNVYTYQHLQK 207 (319)
Q Consensus 135 d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~l~~p~nptG~~~~~~~l~~ 207 (319)
|+|++..+.|.+....++..|++++.++.+.+.++.+|++++++.+++ ++++|++++|+||+|...+ +++
T Consensus 91 d~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~ 167 (370)
T TIGR02539 91 DWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGK 167 (370)
T ss_pred CEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHH
Confidence 999999888766557788999999999976555688999999998853 5689999999999999855 888
Q ss_pred HHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH
Q 020968 208 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287 (319)
Q Consensus 208 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~ 287 (319)
|+++|+++|+++|+|++|..... ....... +..++++|+||+++ +|.|+||++++. ++++.++.
T Consensus 168 i~~la~~~~~~livDea~~~g~~----~~~~~~~---~~di~v~s~sK~~~-~~g~~G~l~~~~--------~~i~~l~~ 231 (370)
T TIGR02539 168 VAKVCREKGVPLLLNCAYTVGRM----PVSAKEI---GADFIVGSGHKSMA-ASGPCGVLGMSE--------EWEDIVLR 231 (370)
T ss_pred HHHHHHHcCCeEEEECccccCCc----CCCHHHc---CCCEEEeeCccccc-CCCCEEEEEECH--------HHHhhhcc
Confidence 88999999999999999987321 1111111 23477799999987 567899999853 47777665
Q ss_pred hh
Q 020968 288 FL 289 (319)
Q Consensus 288 ~~ 289 (319)
..
T Consensus 232 ~~ 233 (370)
T TIGR02539 232 KS 233 (370)
T ss_pred cc
Confidence 44
No 129
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.88 E-value=3.9e-21 Score=178.35 Aligned_cols=200 Identities=19% Similarity=0.222 Sum_probs=152.5
Q ss_pred eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC---CCCCCCcC----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF---NCYSSTVG----ILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (319)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~Y~~~~g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~ 119 (319)
++.|+.+.+. ++++.+.+++.+.+..... ..|....+ .+++|+.++++++ .++++|++++|+
T Consensus 18 ~~yl~~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~------~~~~~v~~~~~~ 86 (397)
T TIGR01976 18 RVFFDNPAGT-----QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLN------ADPPEVVFGANA 86 (397)
T ss_pred eEEecCCccC-----CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEeCCH
Confidence 7999998865 6788899999888754321 23443323 3577777777773 355679999999
Q ss_pred HHHHHHHHHHh---cCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968 120 TQAIEVILTVL---ARPGANILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (319)
Q Consensus 120 t~ai~~~~~~l---~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 192 (319)
+++++.++.++ .++||+|++..+.|.+. ...++..|+++..++.+.+ ++.+|++++++.++++++++++++|
T Consensus 87 t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~ 165 (397)
T TIGR01976 87 TSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAA 165 (397)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCC
Confidence 99998887775 57999999999988653 3456778999999987542 3678999999999888999999999
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+||||.+++ +++|.++|+++|+++++|+++.. +..+..+... +..+++.|++|++ |.|+|++++++
T Consensus 166 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~~---~~d~~~~s~~K~~---g~~~G~l~~~~ 231 (397)
T TIGR01976 166 SNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQAT---GADFLTCSAYKFF---GPHMGILWGRP 231 (397)
T ss_pred CCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHHHc---CCCEEEEechhhc---CCceEEEEEcH
Confidence 999999965 88999999999999999999753 2222222222 2337778999996 45799998854
No 130
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.88 E-value=3.5e-21 Score=177.88 Aligned_cols=204 Identities=17% Similarity=0.142 Sum_probs=156.4
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-------CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-------FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~ 117 (319)
.+.|||+.-... -++++++.+++.+...... ...+...+.+.++|+.+|++++ .+++++++
T Consensus 18 ~~~~~~~~~~~~----~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~~ 85 (387)
T PRK09331 18 EEFINLDPIQRG----GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVTH 85 (387)
T ss_pred ccccccChhhcC----CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEeC
Confidence 456666644322 4778999999998764321 1112223346899999999982 35688999
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-------CceEEEEc
Q 020968 118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------NTVALVII 190 (319)
Q Consensus 118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~l~ 190 (319)
|+++++..++.+++++||+|+++.++|......++..|++++.++...+.++.+|++.+++.+++ ++++|+++
T Consensus 86 g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 86 GAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred CHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 99999999999999999999999999887777788999999999874334567999999998853 57899999
Q ss_pred CCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968 191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
+|+|+||.. .++++|+++|+++|+++++|++|+. +..+...... +..++++|++|+++ .+.|+||++++
T Consensus 166 ~~~~~tG~~---~~l~~I~~la~~~g~~livD~a~~~----g~~~~~~~~~---g~D~~~~s~~K~l~-~~~~~G~l~~~ 234 (387)
T PRK09331 166 HVDGNYGNL---ADAKKVAKVAHEYGIPFLLNGAYTV----GRMPVDGKKL---GADFIVGSGHKSMA-ASAPSGVLATT 234 (387)
T ss_pred CCCCCCccc---ccHHHHHHHHHHcCCEEEEECCccc----CCcCCCHHHc---CCCEEEeeCccccc-CCCCEEEEEEC
Confidence 999999998 4599999999999999999999985 2222222222 23488999999976 45589999885
Q ss_pred C
Q 020968 271 D 271 (319)
Q Consensus 271 ~ 271 (319)
+
T Consensus 235 ~ 235 (387)
T PRK09331 235 E 235 (387)
T ss_pred H
Confidence 3
No 131
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.88 E-value=6.3e-21 Score=177.30 Aligned_cols=203 Identities=21% Similarity=0.277 Sum_probs=156.7
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC----CCC----CcCCHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC----YSS----TVGILPARRAIADYLNRDLPYKLS-PDDVY 114 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----Y~~----~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~ 114 (319)
+.+++.|+.+..+ ++++.+.+++.+.+....... +.. ....+++|+.++++++ .+ +++|+
T Consensus 16 ~~~~~yld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~------~~~~~~v~ 84 (403)
T TIGR01979 16 GKPLVYLDSAATS-----QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFIN------AASDEEIV 84 (403)
T ss_pred CCceEEEeCcccc-----CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------cCCCCeEE
Confidence 5578999999865 567888999987765421110 100 1235688888998883 34 67999
Q ss_pred EeCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceE
Q 020968 115 LTLGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA 186 (319)
Q Consensus 115 ~~~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 186 (319)
+|+|++++++.++.++ .++||+|+++++.|.+ +...++..|.+++.++.+ .++.+|++++++.+.+++++
T Consensus 85 ~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~l 162 (403)
T TIGR01979 85 FTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKL 162 (403)
T ss_pred EeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeE
Confidence 9999999999998875 5789999999998765 345666789999999875 34578999999999989999
Q ss_pred EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (319)
Q Consensus 187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~ 266 (319)
+++++++||||.+++ +++|.++|+++|+++++|++|+... .+..+... +..+++.|++|.++.+| +|+
T Consensus 163 v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~~~---~~d~~~~s~~K~~gp~G--~g~ 230 (403)
T TIGR01979 163 VAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQAL---DCDFYVFSGHKMYGPTG--IGV 230 (403)
T ss_pred EEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc----cccCcccc---CCCEEEEecccccCCCC--ceE
Confidence 999999999999987 7889999999999999999997522 22222222 34589999999987666 888
Q ss_pred EEeeC
Q 020968 267 LVTSD 271 (319)
Q Consensus 267 i~~~~ 271 (319)
++++.
T Consensus 231 l~~~~ 235 (403)
T TIGR01979 231 LYGKE 235 (403)
T ss_pred EEEch
Confidence 88753
No 132
>PRK10534 L-threonine aldolase; Provisional
Probab=99.88 E-value=7.9e-22 Score=178.73 Aligned_cols=212 Identities=17% Similarity=0.169 Sum_probs=151.0
Q ss_pred EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHH
Q 020968 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL 127 (319)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~ 127 (319)
|+|+.+... .++|.+++++.+.... ...|+++....+|++++++++ ..+.+++++|+++++..++
T Consensus 2 ~~~~~~~~~-----~p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~--------g~~~~~v~~~g~~a~~~~l 66 (333)
T PRK10534 2 IDLRSDTVT-----RPSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELS--------GKEAALFLPTGTQANLVAL 66 (333)
T ss_pred cccccccCC-----CCCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHh--------CCCeEEEeCchHHHHHHHH
Confidence 677777643 3778999998765433 347877778899999999998 2345578888888888888
Q ss_pred HHhcCCCCEEEEcCCCCcc-hHHH-HhhCC-CeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCcccc
Q 020968 128 TVLARPGANILLPRPGFPY-YEAR-ATHSH-LEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGN 198 (319)
Q Consensus 128 ~~l~~~gd~Vl~~~p~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~ 198 (319)
.+++++||+|+++.|.|.. |... +...+ .+++.++.+ .+|.+|++++++++.+ ++++|++++|+ +|.
T Consensus 67 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~ 142 (333)
T PRK10534 67 LSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK 142 (333)
T ss_pred HHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence 8889999999998888853 3321 23333 566666653 4578999999998865 57899999766 599
Q ss_pred ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceee-EEEeeCCCCCcc
Q 020968 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG-WLVTSDPNGILQ 277 (319)
Q Consensus 199 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G-~i~~~~~~~~~~ 277 (319)
+++.+++++|+++|+++++++++||+|......... .....+....+.+ +.||||.|+++ +| |++++
T Consensus 143 v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~-~~~~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~~------- 210 (333)
T PRK10534 143 VLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYG-CELKEITQYCDSF-TICLSKGLGTP---VGSLLVGN------- 210 (333)
T ss_pred ecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcC-CCHHHHHhcCCEE-EEEeEcCCCCc---ccceEEcC-------
Confidence 999999999999999999999999997632110000 1111121111222 24899998765 78 56653
Q ss_pred chHHHHHHHHhhhh
Q 020968 278 DSGIVDSIKSFLNI 291 (319)
Q Consensus 278 ~~~~~~~~~~~~~~ 291 (319)
++++++++..+..
T Consensus 211 -~~~i~~~~~~~~~ 223 (333)
T PRK10534 211 -RDYIKRARRWRKM 223 (333)
T ss_pred -HHHHHHHHHHHHH
Confidence 3588888877654
No 133
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.88 E-value=2e-21 Score=179.12 Aligned_cols=242 Identities=13% Similarity=0.117 Sum_probs=164.0
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
.+..+|+|..|....+.. ..+|.+.+++.+++..... ..|+ .....+|++.+++++ | .+++++++|++
T Consensus 25 ~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----g----~~~~~~~~sg~ 94 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLYY-TEPQEELAEKLVEHS----G----ADRVFFCNSGA 94 (379)
T ss_pred CCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhccccccccC-CHHHHHHHHHHHhhC----C----CCEEEEeCCcH
Confidence 367789999975432222 2458999999888765321 2232 223445555555554 3 35999999999
Q ss_pred HHHHHHHHHhc---C----CCCEEEEcCCCCcchHHHHhhCCCeEEE----EeccCCCCCcC--CHHHHHhhhccCceEE
Q 020968 121 QAIEVILTVLA---R----PGANILLPRPGFPYYEARATHSHLEVRH----FDLLPAKGWEV--DLDAVEALADENTVAL 187 (319)
Q Consensus 121 ~ai~~~~~~l~---~----~gd~Vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~--d~~~l~~~l~~~~~~v 187 (319)
+++..+++.+. . +|++|++++|+|+.+...+...+..... .+...+..+.. |++.+++.+.+++++|
T Consensus 95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 174 (379)
T TIGR00707 95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAV 174 (379)
T ss_pred HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEE
Confidence 99999988652 2 3799999999998876666554443221 11111111111 8999999988788888
Q ss_pred EEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968 188 VIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (319)
Q Consensus 188 ~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~ 266 (319)
+++.++||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+.. .+.......++++ ++||.++ +|+|+||
T Consensus 175 ~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~~---t~sK~~~-~G~riG~ 249 (379)
T TIGR00707 175 IVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDII---TLAKGLG-GGVPIGA 249 (379)
T ss_pred EEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCEE---EEccccc-CCcccEE
Confidence 886667778864 78999999999999999999999999987665532 2221222223333 6899997 9999999
Q ss_pred EEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968 267 LVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK 307 (319)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l 307 (319)
++++. ++++.++... ....+.+++.|.++..++
T Consensus 250 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~aa~aaL 283 (379)
T TIGR00707 250 TLAKE--------EVAEAFTPGDHGSTFGGNPLACAAALAVL 283 (379)
T ss_pred EEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHH
Confidence 99853 4777776532 233456888998887654
No 134
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.88 E-value=4.2e-21 Score=179.59 Aligned_cols=203 Identities=19% Similarity=0.256 Sum_probs=154.4
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC-----CCCC---CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-----CYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-----~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~ 116 (319)
.+++.|+.+... ++++.+.+++.+.+...... .|.. ....+++|+.++++++. . ++++|++|
T Consensus 31 ~~~iyLd~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~----~-~~~~v~~t 100 (424)
T PLN02855 31 SKLVYLDNAATS-----QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINA----S-TSREIVFT 100 (424)
T ss_pred CCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCC----C-CCCEEEEe
Confidence 468999999865 67788999998876542111 1110 11246888888888832 1 35799999
Q ss_pred CCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEE
Q 020968 117 LGCTQAIEVILTVL----ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV 188 (319)
Q Consensus 117 ~G~t~ai~~~~~~l----~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~ 188 (319)
+|+|++++.+++++ +++||+|+++.+.|++ +...++..|.+++.++.+.. ..+|++++++.+++++++|+
T Consensus 101 ~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~lv~ 178 (424)
T PLN02855 101 RNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKLVA 178 (424)
T ss_pred CCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceEEE
Confidence 99999999998863 5789999999998864 45566788999999987543 35899999999988899999
Q ss_pred EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (319)
Q Consensus 189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~ 268 (319)
+++++||||.+++ +++|+++|+++|+++++|++|.. +..+..+..+ +..+++.|++|.++.+| +||++
T Consensus 179 i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l~ 246 (424)
T PLN02855 179 THHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV----PHMPVDVQTL---GADFLVASSHKMCGPTG--IGFLW 246 (424)
T ss_pred EeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCCchhc---CCCEEEeecccccCCCc--cEEEE
Confidence 9999999999987 67889999999999999999964 2222233222 22478999999876555 89998
Q ss_pred eeC
Q 020968 269 TSD 271 (319)
Q Consensus 269 ~~~ 271 (319)
+++
T Consensus 247 ~~~ 249 (424)
T PLN02855 247 GKS 249 (424)
T ss_pred Ech
Confidence 754
No 135
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.88 E-value=3.7e-21 Score=178.39 Aligned_cols=243 Identities=16% Similarity=0.147 Sum_probs=170.2
Q ss_pred CCCCeEeccCCCCCCCCCCCC-cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRT-ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
.+..+|+|..|.+... +.. .|.+.+++.+++.... +....+..++++.+++++.+.. ..+++++++|+++
T Consensus 37 dg~~~iD~~~g~~~~~--lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~----~~~~v~~~~gg~e 107 (396)
T PRK02627 37 DGKEYLDFLAGIAVNN--LGHCHPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELS----GMDKVFFCNSGAE 107 (396)
T ss_pred CCCEEEECCccHHhcc--CCCCCHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhc----CCCEEEECCCcHH
Confidence 4677899988865422 344 5889999998876532 1111233577888888887753 3479999999999
Q ss_pred HHHHHHHHhcCCC-------CEEEEcCCCCcchHHHHhhCCCeE-EEEeccC-CCCC----cCCHHHHHhhhccCceEEE
Q 020968 122 AIEVILTVLARPG-------ANILLPRPGFPYYEARATHSHLEV-RHFDLLP-AKGW----EVDLDAVEALADENTVALV 188 (319)
Q Consensus 122 ai~~~~~~l~~~g-------d~Vl~~~p~~~~~~~~~~~~g~~~-~~~~~~~-~~~~----~~d~~~l~~~l~~~~~~v~ 188 (319)
|+..+++.+...+ ++|++..+.|..+...+...+... ......+ ..++ ..|++++++.+.+++++|+
T Consensus 108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vi 187 (396)
T PRK02627 108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVM 187 (396)
T ss_pred HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEE
Confidence 9999999765432 679999999987755444333221 1111111 1111 1289999999987888999
Q ss_pred EcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968 189 IINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (319)
Q Consensus 189 l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i 267 (319)
+..++||+| .+++.+.+++|.++|+++|+++|+||+|.++.+.+.. .....+....++ .+|||.++ +|+|+||+
T Consensus 188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~~~~pdi---~t~sK~~~-~G~rig~~ 262 (396)
T PRK02627 188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHYGIEPDI---MTLAKGLG-GGVPIGAV 262 (396)
T ss_pred EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhcCCCCCE---EEEcchhh-CCcccEEE
Confidence 988899999 6889999999999999999999999999988665532 222222222222 37999987 99999999
Q ss_pred EeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968 268 VTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK 307 (319)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l 307 (319)
++++ ++++.+.... ....+.+++.|.++..++
T Consensus 263 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l 295 (396)
T PRK02627 263 LAKE--------KVADVFTPGDHGSTFGGNPLACAAALAVI 295 (396)
T ss_pred EEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHH
Confidence 9864 4666665432 234567888998877755
No 136
>PLN02721 threonine aldolase
Probab=99.88 E-value=3.1e-21 Score=176.10 Aligned_cols=215 Identities=16% Similarity=0.154 Sum_probs=151.5
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~ 124 (319)
..+++|+.+.+. .+++.+.+++.+.........|++ ...+||+++++++.. +.+++++++++++.
T Consensus 5 ~~~~~~~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~ 69 (353)
T PLN02721 5 SRVVDLRSDTVT-----KPTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFGK--------EAALFVPSGTMGNL 69 (353)
T ss_pred hhhhhhhccccc-----CCCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhCC--------ceeEEecCccHHHH
Confidence 357899999876 357888888876411222223433 368999999999942 33566666677777
Q ss_pred HHHHHhcC-CCCEEEEcCCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-------cCceEEEEcCC-
Q 020968 125 VILTVLAR-PGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-------ENTVALVIINP- 192 (319)
Q Consensus 125 ~~~~~l~~-~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~~~~v~l~~p- 192 (319)
.++.++++ +||+|++++|+|..... .+...|++++.++.+ .++.+|++.+++.++ +++++|+++++
T Consensus 70 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~ 147 (353)
T PLN02721 70 ISVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTH 147 (353)
T ss_pred HHHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccc
Confidence 77887777 99999999999864433 567889999888764 345789999999987 57889999875
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccC--CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
+||+|.+++.+++++|.++|+++|+++|+|++|..... .+. ....+... ...++.|+||+++.+ +||++..
T Consensus 148 ~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~---~~~~~~~~-~d~~~~s~sK~l~~~---~G~~~~~ 220 (353)
T PLN02721 148 ANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV---PVHRLVKA-ADSVSVCLSKGLGAP---VGSVIVG 220 (353)
T ss_pred cccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC---CHHHHhhh-CCEEEEecccccCCc---eeeEEec
Confidence 78999999999999999999999999999998853221 111 11111111 124455899998643 6764433
Q ss_pred CCCCCccchHHHHHHHHhhh
Q 020968 271 DPNGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~ 290 (319)
+ +++++.+.....
T Consensus 221 ~-------~~~~~~~~~~~~ 233 (353)
T PLN02721 221 S-------KSFIRKAKRLRK 233 (353)
T ss_pred C-------HHHHHhHHHHHH
Confidence 3 247776665554
No 137
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.88 E-value=8.3e-21 Score=174.40 Aligned_cols=190 Identities=21% Similarity=0.254 Sum_probs=144.0
Q ss_pred CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCC
Q 020968 80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSH 155 (319)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g 155 (319)
+.+|+ .+...+|+++++++. ..+++++++|+++|+..++.+++++||+|+++.|+|..+...+ ...+
T Consensus 45 Y~R~~-~p~~~~le~~lA~l~--------g~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 45 YSRSG-NPTRDLLQQALAELE--------GGAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred ccCCC-CchHHHHHHHHHHHh--------CCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 44554 345789999999988 2468999999999999999999999999999999998644333 2234
Q ss_pred CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968 156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF 235 (319)
Q Consensus 156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 235 (319)
.++..++. .|++.+++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 116 ~~v~~~d~-------~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~--- 182 (382)
T TIGR02080 116 FRVLFVDQ-------GDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN--- 182 (382)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 45444431 3889999999888999999999999999977 7788899999999999999998644211
Q ss_pred CCCcccCCCCCeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHH
Q 020968 236 VPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLK 303 (319)
Q Consensus 236 ~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~ 303 (319)
++. ... .++++|+||.++. +|++.|++++.++ +++++++..+.. ....+++.++.+
T Consensus 183 -pl~-~ga---Divv~S~sK~l~G~~~~~~G~i~~~~~-------~~~~~l~~~~~~~g~~~sp~~a~l~ 240 (382)
T TIGR02080 183 -PLA-LGA---DLVLHSCTKYLNGHSDVIAGAVIAKDP-------QVAEELAWWANNLGVTGGAFDSYLT 240 (382)
T ss_pred -chh-hCC---CEEEeecceeccCCCCceeEEEEeCCH-------HHHHHHHHHHHccCCCCCHHHHHHH
Confidence 221 122 3899999999864 6889999887553 477777766654 445566665543
No 138
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.88 E-value=1.2e-20 Score=174.01 Aligned_cols=183 Identities=20% Similarity=0.259 Sum_probs=139.6
Q ss_pred cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEe
Q 020968 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFD 162 (319)
Q Consensus 87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~ 162 (319)
+...+|++.+++++ ..+++++++|+++|+..++.+++++||+|+++.+.|.+.. ..+...|++++.++
T Consensus 61 p~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd 132 (390)
T PRK08133 61 PTVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVD 132 (390)
T ss_pred hHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEEC
Confidence 34678888899887 3457899999999999999999999999999999986643 34567899988887
Q ss_pred ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 242 (319)
.+ |++++++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|....... ++ ..
T Consensus 133 ~~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~----pl-~~- 196 (390)
T PRK08133 133 LT-------DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ----PL-KL- 196 (390)
T ss_pred CC-------CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh-
Confidence 52 788999999889999999999999999965 8999999999999999999987543211 11 11
Q ss_pred CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHH
Q 020968 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFL 302 (319)
Q Consensus 243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 302 (319)
+..+++.|+||.++.+|.++|++++.++ ++++++..... .....+++.++.
T Consensus 197 --g~Divv~S~sK~~~g~g~~~GG~vv~~~-------~~~~~~~~~~~~~g~~~~~~~a~~ 248 (390)
T PRK08133 197 --GADVVIHSATKYLDGQGRVLGGAVVGSK-------ELMEEVFGFLRTAGPTLSPFNAWV 248 (390)
T ss_pred --CCcEEEeecceeecCCcceEeEEEEcCH-------HHHHHHHHHHHHhCCCCCHHHHHH
Confidence 1238899999999999999955544332 35555554433 233445554443
No 139
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.88 E-value=1.5e-20 Score=174.69 Aligned_cols=218 Identities=16% Similarity=0.107 Sum_probs=158.0
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC------CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA------RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
.+.++|..++. .+++.+++++...+... ....|....+.+++++.+++++.+.+|. +...|+++ |
T Consensus 19 ~~~~~~~~~~~------~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~v~~~-s 89 (402)
T cd00378 19 RETLELIASEN------FTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA--EYANVQPH-S 89 (402)
T ss_pred HhCeeeeccCC------cCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC--CceeeecC-C
Confidence 55888887762 45789999998664221 1223555556678888777777666664 34455555 4
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-----HhhCCCeEEEEeccCC-CCCcCCHHHHHhhhc-cCceEEEEcC
Q 020968 119 CTQAIEVILTVLARPGANILLPRPGFPYYEAR-----ATHSHLEVRHFDLLPA-KGWEVDLDAVEALAD-ENTVALVIIN 191 (319)
Q Consensus 119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~-~~~~~v~l~~ 191 (319)
+++|+..++.+++++||+|+++.|.|..+... ++..|.++..++...+ +++.+|++++++.+. .+++++++++
T Consensus 90 gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~ 169 (402)
T cd00378 90 GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGA 169 (402)
T ss_pred cHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecC
Confidence 67999999999999999999999999765433 5667877777766543 267899999999885 5788999889
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCC-CCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY-DHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~-~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
|+||+ . .++++|+++|+++|+++|+|++| .++.+.+..+.++. . . .++++|+||++ +|+|.||++++
T Consensus 170 ~~~~~--~---~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~--~-dv~~~s~sK~l--~G~~gg~i~~~ 237 (402)
T cd00378 170 SAYPR--P---IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--G--A-DVVTTTTHKTL--RGPRGGLILTR 237 (402)
T ss_pred cccCC--C---cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--C--C-cEEEeccccCC--CCCCceEEEec
Confidence 88864 3 24899999999999999999995 45555443222332 1 1 27899999985 88999999986
Q ss_pred CCCCCccchHHHHHHHHhhh
Q 020968 271 DPNGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~ 290 (319)
++ +++++++....
T Consensus 238 ~~-------~~~~~l~~~~~ 250 (402)
T cd00378 238 KG-------ELAKKINSAVF 250 (402)
T ss_pred cH-------HHHHHHHHHhC
Confidence 53 47777766544
No 140
>PRK07179 hypothetical protein; Provisional
Probab=99.87 E-value=2.6e-20 Score=173.28 Aligned_cols=214 Identities=13% Similarity=0.138 Sum_probs=157.2
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-----CCCC-CCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-----FNCY-SSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y-~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~ 116 (319)
.+..+++|+..+ |..+...|.+.+++.+++.... ...| .......+|++.+++++ ..+.++++
T Consensus 52 ~g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~--------g~~~~~~~ 120 (407)
T PRK07179 52 PGPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT--------GFESCLLC 120 (407)
T ss_pred CCCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh--------CCCcEEEE
Confidence 355678888877 3456778999999999886421 1112 11224568888888887 23567889
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCc
Q 020968 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNP 195 (319)
Q Consensus 117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~np 195 (319)
+|+++|+..+++++..+||.|++..+.|......++..|.++..++. .|++.+++++++ ++++|++.+++||
T Consensus 121 ~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~ 193 (407)
T PRK07179 121 QSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYST 193 (407)
T ss_pred CCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 99999999999999999999999999998877777788887765542 489999998875 4778888999999
Q ss_pred cccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC-eEEEecCccccCCCcceeeEEEeeCCCC
Q 020968 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSDPNG 274 (319)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~-vi~~~s~sK~~~~~G~r~G~i~~~~~~~ 274 (319)
||.+.+ +++|.++|+++|+++|+||+|....++......+..++.... .+++.|+||+++ .|+||++++.
T Consensus 194 tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~--- 264 (407)
T PRK07179 194 TGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPR--- 264 (407)
T ss_pred CCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCH---
Confidence 999977 788999999999999999999854433222111222222122 488999999975 3689999853
Q ss_pred CccchHHHHHHHHh
Q 020968 275 ILQDSGIVDSIKSF 288 (319)
Q Consensus 275 ~~~~~~~~~~~~~~ 288 (319)
++++.+...
T Consensus 265 -----~~~~~~~~~ 273 (407)
T PRK07179 265 -----ELAEYVPFV 273 (407)
T ss_pred -----HHHHHHHHh
Confidence 465655543
No 141
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.87 E-value=1.5e-20 Score=175.18 Aligned_cols=231 Identities=16% Similarity=0.169 Sum_probs=157.6
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
...++|+..+. ..+..+|.+.+++.+.+..... ..|+......+|++.+++++. .++.+++++|
T Consensus 46 ~~~~~~~sn~y---l~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-------~~~~i~~~sG 115 (410)
T PRK13392 46 RRVTIWCSNDY---LGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-------KESALLFTSG 115 (410)
T ss_pred ceEEEEECCCc---cCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-------CCCEEEECcH
Confidence 45788888774 3467889999999988765321 123333346788888888882 2455666665
Q ss_pred HHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcCC
Q 020968 119 CTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINP 192 (319)
Q Consensus 119 ~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p 192 (319)
++++..++..+.. +|+.|++....|..+...++..|.++..++. -|.+.+++.+. +++++|++++|
T Consensus 116 -~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~t~~v~i~~~ 187 (410)
T PRK13392 116 -YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH-------NDLADLEEQLASVDPDRPKLIAFESV 187 (410)
T ss_pred -HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC-------CCHHHHHHHHHhccCCCCEEEEEeCC
Confidence 5677777776643 7898888777887777777888888766542 14444554442 46789999999
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC-eEEEecCccccCCCcceeeEEEeeC
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~-vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+||||.+++ +++|.++|+++|+++|+||+|....++.............++ .++++|+||.|+++| ||++++.
T Consensus 188 ~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~ 261 (410)
T PRK13392 188 YSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASA 261 (410)
T ss_pred CCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCH
Confidence 999999977 888999999999999999999954443221111111111122 388999999999998 9998742
Q ss_pred CCCCccchHHHHHHHHhhhh---cCCcchHHHHHHHHHH
Q 020968 272 PNGILQDSGIVDSIKSFLNI---SSDPATFIQFLKSSRK 307 (319)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l 307 (319)
++++.++..... +...+++.|.++..++
T Consensus 262 --------~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL 292 (410)
T PRK13392 262 --------DLIDFVRSFAPGFIFTTALPPAVAAGATAAI 292 (410)
T ss_pred --------HHHHHHHHhCcchhccCcCCHHHHHHHHHHH
Confidence 577777765532 2334556676665544
No 142
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1.4e-20 Score=173.74 Aligned_cols=185 Identities=17% Similarity=0.224 Sum_probs=142.4
Q ss_pred CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEE
Q 020968 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHF 161 (319)
Q Consensus 86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~ 161 (319)
.+...+|++.+++++ ..+..++++++++|+..++.+++++||+|+++.|.|.... ..+...|+++..+
T Consensus 63 ~p~~~~le~~lA~l~--------g~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~v 134 (398)
T PRK08249 63 NPTVQAFEEKVRILE--------GAEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLC 134 (398)
T ss_pred ChHHHHHHHHHHHHh--------CCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEc
Confidence 345689999999998 2356788888899999999999999999999999998653 3455678887766
Q ss_pred eccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968 162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (319)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 241 (319)
+. .|++++++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|....... ++. .
T Consensus 135 d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~----~l~-~ 199 (398)
T PRK08249 135 ET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN----PLA-L 199 (398)
T ss_pred CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC----chh-h
Confidence 53 5899999999888999999999999999977 8889999999999999999999654321 221 1
Q ss_pred CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHH
Q 020968 242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLK 303 (319)
Q Consensus 242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~ 303 (319)
. ..+++.|+||.++.+|.++|++++.+ ++++++++..+.. ....+++.++.+
T Consensus 200 ~---~Divv~S~sK~l~g~~~~~gG~vv~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~ 252 (398)
T PRK08249 200 G---ADLVIHSATKFLSGHADALGGVVCGS-------KELMEQVYHYREINGATMDPMSAYLI 252 (398)
T ss_pred C---CCEEeccCceecCCCCCceEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 1 22888999999988888875544433 2577777766653 445566666653
No 143
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.87 E-value=1.4e-21 Score=167.76 Aligned_cols=295 Identities=17% Similarity=0.156 Sum_probs=211.8
Q ss_pred CCCCCCCchHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCC-CCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc
Q 020968 9 GNQWGFKANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDP-SAFPSFRTASVAVDAIVHSVRSARFNCYSSTV 87 (319)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~ 87 (319)
.++|.- ++.+.+++.|.++.+.+.+ ..++.-|||+.|.. +........+.+++|-++.+.......|-|..
T Consensus 24 ~~s~~s----~V~maPpDpILGVTeAfk~----D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~ 95 (427)
T KOG1411|consen 24 ASSWWS----HVEMAPPDPILGVTEAFKK----DPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPIT 95 (427)
T ss_pred ccchhh----cCCCCCCCCcccHHHHHhc----CCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhcccc
Confidence 345544 6889999999999987764 34788899999964 33444667788888877766655556899999
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEE--eCCHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~--~~G~t~ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 163 (319)
|.+++.+..+++........+..++|+. |-++|.++......+. -++..|.++.|+|.++..+....|+.+..+..
T Consensus 96 Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrY 175 (427)
T KOG1411|consen 96 GLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRY 175 (427)
T ss_pred chHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeee
Confidence 9999999999998543333445556655 4557778877766553 36899999999999999999999999988887
Q ss_pred cCCCCCcCCHHHHHhhhccCc-eEEEEcC--CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC--CC
Q 020968 164 LPAKGWEVDLDAVEALADENT-VALVIIN--PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV--PM 238 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~-~~v~l~~--p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~ 238 (319)
......++|.+.+.+.+.+.+ ..+++.+ .|||||+-.+.+++++|.++.++.+.+-+.|.+|++|..+..... .+
T Consensus 176 yd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~av 255 (427)
T KOG1411|consen 176 YDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAV 255 (427)
T ss_pred ccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHH
Confidence 766677899888777665432 2233343 399999999999999999999999999999999999886543211 12
Q ss_pred ccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHHhcccc
Q 020968 239 GVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRKLKRNS 312 (319)
Q Consensus 239 ~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 312 (319)
..+ ....+++++.|+.|.+|+.|.|+|.+.+..+..+. ...+..+++.....+++.|++--.-++..++++++
T Consensus 256 R~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~-A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~ 329 (427)
T KOG1411|consen 256 RLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDADE-AKRVESQLKILIRPMYSNPPLHGARIVATILSDPD 329 (427)
T ss_pred HHHHHcCCceEeehhhhhhcchhhhccceeEEEecCHHH-HHHHHHHHHHHhcccccCCCccchhhhhhccCChH
Confidence 222 23457899999999999999999998443332111 11233334444444444455554444444666553
No 144
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.87 E-value=2.6e-20 Score=172.18 Aligned_cols=194 Identities=21% Similarity=0.231 Sum_probs=141.3
Q ss_pred CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHH
Q 020968 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEV 125 (319)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~ 125 (319)
+.|.++.+.. ++.++.+.+.+........+.+|+ .+...+|++.+|+++. .+..+++++++.++..
T Consensus 30 ~pi~~~~~~~-----~~~~~~~~~~~~~~~~~~~y~r~~-~p~~~~Le~~lA~l~G--------~~~~~~~~sG~~Ai~~ 95 (398)
T PRK07504 30 EALFLTQGFV-----YDTAEAAEARFKGEDPGFIYSRYS-NPTVDMFEKRMCALEG--------AEDARATASGMAAVTA 95 (398)
T ss_pred CCeECCCCcc-----CCCHHHHHHHhccCcCCceeecCC-CchHHHHHHHHHHHhC--------CCeeeEecCHHHHHHH
Confidence 4577777753 233444433222111111233453 3457899999999982 2344567788899988
Q ss_pred HHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccC
Q 020968 126 ILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYT 201 (319)
Q Consensus 126 ~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 201 (319)
++.+++++||+|+++.+.|..+... +...|+++..++ ..|++++++++++++++|++++|+||+|.+++
T Consensus 96 ~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d 168 (398)
T PRK07504 96 AILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID 168 (398)
T ss_pred HHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC
Confidence 8888889999999999999875433 346788877775 26899999999889999999999999999976
Q ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 202 YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+++|.++|+++|+++|+|++|....+. .++ .+ +..+++.|+||.++++|+++|++++.+
T Consensus 169 ---l~~I~~la~~~gi~lvvD~a~a~~~~~----~~~-~~---gaDivv~S~sK~l~g~g~~~GG~vv~~ 227 (398)
T PRK07504 169 ---IAAVAKIANQAGAKLVVDNVFATPLFQ----KPL-EL---GAHIVVYSATKHIDGQGRCLGGVVLSD 227 (398)
T ss_pred ---HHHHHHHHHHcCCEEEEECCccccccC----Cch-hh---CCCEEEeeccccccCCccceEEEEEeC
Confidence 888899999999999999999864432 111 12 234899999999999999997555443
No 145
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=2e-20 Score=171.99 Aligned_cols=192 Identities=22% Similarity=0.275 Sum_probs=145.1
Q ss_pred CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCC
Q 020968 80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSH 155 (319)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g 155 (319)
+.+|+ ++....|++++|++.+ .+++++++|+++++..++.+++++||+|+++.|.|......+ ...+
T Consensus 46 Y~R~~-~pt~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g 116 (386)
T PRK08045 46 YSRRG-NPTRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_pred eeCCC-CccHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence 34554 3467899999999872 346999999999999999999999999999999998633322 2234
Q ss_pred CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968 156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF 235 (319)
Q Consensus 156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 235 (319)
.++..++ ..|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 117 i~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~---- 182 (386)
T PRK08045 117 YRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQ---- 182 (386)
T ss_pred eEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC----
Confidence 4555443 25899999999888999999999999999987 778888899999999999999874321
Q ss_pred CCCcccCCCCCeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHH
Q 020968 236 VPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSS 305 (319)
Q Consensus 236 ~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~ 305 (319)
.++. ... .+++.|++|.++. ++.+.|++++.++ ++.++++.... .....+++.++.+..
T Consensus 183 ~pl~-~ga---Divv~S~tK~l~G~~d~~~G~vi~~~~-------~~~~~l~~~~~~~g~~~~p~~~~l~~r 243 (386)
T PRK08045 183 NPLA-LGA---DLVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLR 243 (386)
T ss_pred Cchh-hCC---CEEEeecceeccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 1221 222 2899999999864 5688999987543 47777765554 355677888876554
No 146
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.87 E-value=1.9e-20 Score=173.77 Aligned_cols=206 Identities=22% Similarity=0.276 Sum_probs=155.4
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC-----CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS-----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
+..+++|+.|+|+ ++.|+.+.++..+. . ....|.+ ..|..++++++++++.+.+|. +.++++++++
T Consensus 19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~ 89 (398)
T cd00613 19 DQSMSFLGSGTYK----HNPPAVIKRNILEN--E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDE 89 (398)
T ss_pred ccCcccccccccC----CcCcHHHHHHhccc--c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCc
Confidence 3456999999987 67777777766665 2 2235555 678999999999999987764 3446766665
Q ss_pred HH-HHHHHHHHHhcCC--CCEEEEcCCCCcchHHHHhhCC----CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968 119 CT-QAIEVILTVLARP--GANILLPRPGFPYYEARATHSH----LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191 (319)
Q Consensus 119 ~t-~ai~~~~~~l~~~--gd~Vl~~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~ 191 (319)
++ ++...+..++..+ ||+|++++|.|..+...+...| .+++.++..+ ++.+|++++++.+.+++++|++++
T Consensus 90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~ 167 (398)
T cd00613 90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQY 167 (398)
T ss_pred hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEEC
Confidence 44 5555555555665 9999999999999888887777 8888887643 346899999999988899999999
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceeeEE
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWL 267 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i 267 (319)
|+ |+|.+. +.+++|.++|+++|+++|+|+++..... ....... +..+++.|++|++ +| |+|+||+
T Consensus 168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~----~~~~~~~---~~d~~~~s~~K~~-~p~g~Ggp~~g~l 236 (398)
T cd00613 168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTG----LKPPGEY---GADIVVGNLQKTG-VPHGGGGPGAGFF 236 (398)
T ss_pred CC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccC----CCChHHc---CCCEEEeeccccC-CCCCCCCCceeEE
Confidence 85 899983 3469999999999999999998754221 1111111 3459999999998 66 8999999
Q ss_pred EeeC
Q 020968 268 VTSD 271 (319)
Q Consensus 268 ~~~~ 271 (319)
++++
T Consensus 237 ~~~~ 240 (398)
T cd00613 237 AVKK 240 (398)
T ss_pred EEhh
Confidence 9854
No 147
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.87 E-value=5.5e-20 Score=167.57 Aligned_cols=211 Identities=16% Similarity=0.157 Sum_probs=148.7
Q ss_pred CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCC----CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYS----STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (319)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~ 119 (319)
.+++|+..+. ....-+|++.+++++.++.... ..|. ......++++.+++++ | . ++.++++++
T Consensus 2 ~~~~~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~iv~~sg 70 (349)
T cd06454 2 KVLNFCSNDY---LGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----G--K--EAALVFSSG 70 (349)
T ss_pred CceecccCCc---cccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----C--C--CCEEEeccH
Confidence 3567877763 2345568999999998875321 1222 2223456666666665 2 1 245666667
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-----CceEEEEcCCCC
Q 020968 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-----NTVALVIINPGN 194 (319)
Q Consensus 120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~~v~l~~p~n 194 (319)
++++..++++++++||+|+++.|.|..+...++..|.+++.++. +|++.+++.+++ .++++++++++|
T Consensus 71 ~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~ 143 (349)
T cd06454 71 YAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYS 143 (349)
T ss_pred HHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence 78888888888899999999999999988888889998877652 477788887753 457788889999
Q ss_pred ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCC-CCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCC
Q 020968 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP-FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (319)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~ 273 (319)
|||...+ +++|+++|+++|+++|+|++|+...+.... ..........+.+++++|+||.++.+| ||++.++
T Consensus 144 ~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~-- 215 (349)
T cd06454 144 MDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK-- 215 (349)
T ss_pred CCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCH--
Confidence 9999855 889999999999999999999753332111 111111223356799999999998766 8988643
Q ss_pred CCccchHHHHHHHHh
Q 020968 274 GILQDSGIVDSIKSF 288 (319)
Q Consensus 274 ~~~~~~~~~~~~~~~ 288 (319)
++.+.+...
T Consensus 216 ------~~~~~~~~~ 224 (349)
T cd06454 216 ------ELIDYLRSY 224 (349)
T ss_pred ------HHHHHHHHh
Confidence 466666543
No 148
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.87 E-value=2.9e-20 Score=172.10 Aligned_cols=183 Identities=21% Similarity=0.249 Sum_probs=138.8
Q ss_pred cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEe
Q 020968 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD 162 (319)
Q Consensus 87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~ 162 (319)
+...+|++.++++++ .+..+++++++.|+.+++.+++++||+|+++.|.|... ...+...|+++..++
T Consensus 65 p~~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd 136 (403)
T PRK07503 65 PTLALLEQRMASLEG--------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVD 136 (403)
T ss_pred chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeC
Confidence 457899999999883 23467777888999999999999999999999998653 234567888888877
Q ss_pred ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 242 (319)
. .|++.+++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|...... .++. +
T Consensus 137 ~-------~d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~----~~l~-~- 200 (403)
T PRK07503 137 L-------TDPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ----RPLE-L- 200 (403)
T ss_pred C-------CCHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----Cchh-h-
Confidence 5 2789999999888999999999999999965 899999999999999999999864321 1221 1
Q ss_pred CCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh--hhh-cCCcchHHHHHH
Q 020968 243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF--LNI-SSDPATFIQFLK 303 (319)
Q Consensus 243 ~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~q~~~ 303 (319)
...+++.|+||.++.+| .|.|+++. + +++.++++.. ... ....+++.++.+
T Consensus 201 --g~Di~v~S~tK~l~g~gd~~gG~v~~-~-------~~l~~~l~~~~~~~~~g~~~s~~~a~l~ 255 (403)
T PRK07503 201 --GADLVVHSATKYLGGHGDITAGLVVG-G-------KALADRIRLEGLKDMTGAVMSPFDAFLL 255 (403)
T ss_pred --CCCEEEccccccccCCCceeEEEEEc-C-------HHHHHHHHhhhHHhCcCCCCCHHHHHHH
Confidence 22499999999998876 67788774 3 2477777633 332 334455555443
No 149
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=2.7e-20 Score=172.08 Aligned_cols=185 Identities=22% Similarity=0.282 Sum_probs=139.2
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY----YEARATHSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~ 163 (319)
...+|++.++++.. .+..++++++++++.+++.+++++||+|+++.|.|.. +...+...|.++..++.
T Consensus 61 ~~~~Le~~lA~l~g--------~~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 61 TRDLLGEALAELEG--------GAGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred HHHHHHHHHHHHhC--------CCceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 45678888888762 2334566666899999999999999999999999986 34455667888777764
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 243 (319)
.|++++++.+++++++|++++|+||||.+. ++++|+++|+++|+++|+|++|.... ...++. +..
T Consensus 133 -------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~---dl~~I~~la~~~gi~vIvD~a~a~~~----~~~pl~-~ga 197 (405)
T PRK08776 133 -------TDPRSLADALAQSPKLVLIETPSNPLLRIT---DLRFVIEAAHKVGALTVVDNTFLSPA----LQKPLE-FGA 197 (405)
T ss_pred -------CCHHHHHHhcCcCCeEEEEECCCCCCCccC---CHHHHHHHHHHcCCEEEEECCCcccc----cCCccc-ccC
Confidence 388999999888899999999999999994 58999999999999999999997522 112221 222
Q ss_pred CCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968 244 IVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS 305 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~ 305 (319)
.+++.|.+|.++.+ ++..|+++++++ ++.+++...... ....+++.++++..
T Consensus 198 ---Divv~S~tK~l~g~~~~~~G~vv~~~~-------~l~~~l~~~~~~~g~~~s~~~a~l~~~ 251 (405)
T PRK08776 198 ---DLVLHSTTKYINGHSDVVGGAVVARDA-------ELHQQLVWWANALGLTGSPFDAFLTLR 251 (405)
T ss_pred ---CEEEecCceeecCCCCceEEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 38999999999876 578899887653 477777655443 33456676666554
No 150
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=2.9e-20 Score=171.35 Aligned_cols=174 Identities=21% Similarity=0.202 Sum_probs=133.9
Q ss_pred CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEE
Q 020968 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRH 160 (319)
Q Consensus 85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~ 160 (319)
+.+...+|+++++++++. +..++++++++|+.+++.+++++||+|+++.|.|......+ ...|+++..
T Consensus 59 ~~p~~~~Le~~lA~~~g~--------~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 59 GNPTRTALEEQLAALEGG--------AYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred CCccHHHHHHHHHHHhCC--------CceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 345788999999999832 33455567789999999999999999999999998643332 235777666
Q ss_pred EeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240 (319)
Q Consensus 161 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 240 (319)
++. .|++++++++++++++|++++|+||+|.+ .++++|+++|+++|+++|+|++|...... .++.
T Consensus 131 ~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~----~p~~- 195 (388)
T PRK07811 131 VDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQ----QPLA- 195 (388)
T ss_pred eCC-------CCHHHHHHhcCcCCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccC----Cchh-
Confidence 553 48999999998899999999999999998 56999999999999999999999874431 1221
Q ss_pred cCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968 241 FGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 241 ~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 291 (319)
. ...+++.|++|.++.+| .+.||++++++ ++.++++..+..
T Consensus 196 ~---gaDivv~S~sK~l~g~~~~~gG~vv~~~~-------~l~~~~~~~~~~ 237 (388)
T PRK07811 196 L---GADVVVHSTTKYIGGHSDVVGGALVTNDE-------ELDEAFAFLQNG 237 (388)
T ss_pred h---CCcEEEecCceeecCCCCcEEEEEEECCH-------HHHHHHHHHHHh
Confidence 1 12399999999998865 57799987653 466666655543
No 151
>PRK02948 cysteine desulfurase; Provisional
Probab=99.86 E-value=2.6e-20 Score=171.87 Aligned_cols=198 Identities=15% Similarity=0.090 Sum_probs=147.9
Q ss_pred EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC--------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS--------TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (319)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~ 119 (319)
+.|+.+..+ ++++.+.+++.+.+..... ++.. ..-.+++|+.+++++ +.++++|++++|+
T Consensus 2 ~yld~a~~~-----~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~ 69 (381)
T PRK02948 2 IYLDYAATT-----PMSKEALQTYQKAASQYFG-NESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGG 69 (381)
T ss_pred EeccCCCCC-----CCCHHHHHHHHHHHHhcCC-CCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcH
Confidence 567777644 6778899999887753211 1111 012456677777776 3467899999999
Q ss_pred HHHHHHHHHHhc----CCCCEEEEcCCCCcchH---HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968 120 TQAIEVILTVLA----RPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (319)
Q Consensus 120 t~ai~~~~~~l~----~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 192 (319)
++++..++.++. ++|++|++....|+.+. ..++..|.++..++.+. ++.+|++++++.+++++++|++++|
T Consensus 70 t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~ 147 (381)
T PRK02948 70 TESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHA 147 (381)
T ss_pred HHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECC
Confidence 999999988875 57899999997776543 44567899999988753 4578999999999888899999999
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+||||.+++ +++|.++|+++|+++++|+++.. +..+..+. ..+..+++.|++|.++.+| +|++++.+
T Consensus 148 ~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~----g~~~~~~~---~~~~d~~~~s~~K~~gp~G--~G~l~~~~ 214 (381)
T PRK02948 148 NSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTF----GKLPIDVF---EMGIDSLSVSAHKIYGPKG--VGAVYINP 214 (381)
T ss_pred cCCcEeehh---HHHHHHHHHHcCCEEEEEChhhc----cccccCcc---cCCCCEEEecHHhcCCCCc--EEEEEEcC
Confidence 999999966 78899999999999999976543 11122222 2234588999999998888 78887654
No 152
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=2.9e-20 Score=171.51 Aligned_cols=188 Identities=18% Similarity=0.160 Sum_probs=144.5
Q ss_pred CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCC
Q 020968 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHL 156 (319)
Q Consensus 81 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~ 156 (319)
.+|+ ++...+|++.++++. ..+++++++|+++|+.+++.+++++||+|+++.|.|..+.. .+...|+
T Consensus 60 ~r~~-~pt~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi 130 (394)
T PRK07050 60 GLHA-TPTSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGI 130 (394)
T ss_pred CCCC-CHHHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCe
Confidence 3443 445678888888887 35689999999999999999999999999999999987653 4567898
Q ss_pred eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC
Q 020968 157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (319)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 236 (319)
++..++.. +.+++++++++++++|++++|+||+|.+ .++++|+++|+++|+++++|++|.....- .
T Consensus 131 ~v~~vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~~----~ 196 (394)
T PRK07050 131 TVRFYDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLAF----K 196 (394)
T ss_pred EEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCccccccc----C
Confidence 88877631 4567888898899999999999999876 78999999999999999999999763321 1
Q ss_pred CCcccCCCCCeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHH
Q 020968 237 PMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFL 302 (319)
Q Consensus 237 ~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~ 302 (319)
++. . +..+++.|+||.++. .+.+.|++++.++ ++.++++..+.. ....+++..+.
T Consensus 197 ~l~-~---GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l 253 (394)
T PRK07050 197 PFE-H---GVDISVQALTKYQSGGSDVLMGATITADA-------ELHAKLKLARMRLGIGVSADDCSL 253 (394)
T ss_pred HHH-c---CCeEEEEECCceecCCCCeeEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHH
Confidence 111 1 234999999999864 4567899887553 477777766653 44555555443
No 153
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.86 E-value=1.9e-20 Score=173.18 Aligned_cols=244 Identities=16% Similarity=0.168 Sum_probs=163.9
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|.-..+..+ -.|.+.+++.+++..... .+. ....+....+++.+.+.. ..+++++++|+++|
T Consensus 29 dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~~~~sGseA 100 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSN-LYRIPEQERLAERLVENS----FADKVFFTNSGAEA 100 (389)
T ss_pred CCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--ccc-ccCChHHHHHHHHHHhhC----CCCEEEEcCCcHHH
Confidence 4667899988743222334 568999999998865221 111 112233444555554422 34689999999999
Q ss_pred HHHHHHHh----cCCCC----EEEEcCCCCcchHHHHhhCCCeEEEEec-cC-CCCCc----CCHHHHHhhhccCceEEE
Q 020968 123 IEVILTVL----ARPGA----NILLPRPGFPYYEARATHSHLEVRHFDL-LP-AKGWE----VDLDAVEALADENTVALV 188 (319)
Q Consensus 123 i~~~~~~l----~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~d~~~l~~~l~~~~~~v~ 188 (319)
+..+++.. ..+|| +|++.++.|+++...+...+........ .+ ..++. .|++.+++.+++++++|+
T Consensus 101 ~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avi 180 (389)
T PRK01278 101 VECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAIL 180 (389)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEE
Confidence 99998876 34565 8999999999876555544433222110 00 11222 589999999987888888
Q ss_pred EcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968 189 IINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (319)
Q Consensus 189 l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i 267 (319)
+..++||+| .+++.+.+++|.++|+++|+++|+||+|.++.+.+... ....+.-... +.++||.++ +|+|+||+
T Consensus 181 vep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~~ 255 (389)
T PRK01278 181 IEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF-AHEWAGVTPD---IMAVAKGIG-GGFPLGAC 255 (389)
T ss_pred EecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce-eecccCCCCC---EEEEehhcc-CCcceEEE
Confidence 887788888 78899999999999999999999999999876655422 1111111112 348999975 89999999
Q ss_pred EeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968 268 VTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
++++ ++++.+..... .+.+.+++.|.++..++
T Consensus 256 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l 288 (389)
T PRK01278 256 LATE--------EAAKGMTPGTHGSTYGGNPLAMAVGNAVL 288 (389)
T ss_pred EEcH--------HHHhccCCCCCCCCCCccHHHHHHHHHHH
Confidence 9864 35555544332 34457888888875544
No 154
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.86 E-value=2.5e-20 Score=170.70 Aligned_cols=191 Identities=19% Similarity=0.227 Sum_probs=144.6
Q ss_pred CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCC
Q 020968 80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSH 155 (319)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g 155 (319)
+.+|+. +...+|++.++++.+ .+..++++|+++|+..++ .++++||+|+++.|.|... ...++..|
T Consensus 46 y~r~~~-pt~~~le~~la~l~g--------~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 115 (366)
T PRK08247 46 YSRTGN-PTRGVLEQAIADLEG--------GDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWN 115 (366)
T ss_pred ccCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccC
Confidence 334443 467899999999983 234578888899999876 5778999999999999864 34455689
Q ss_pred CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968 156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF 235 (319)
Q Consensus 156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 235 (319)
+++..++. .|++.+++++++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|.......
T Consensus 116 ~~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~~~--- 182 (366)
T PRK08247 116 VRFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVLQR--- 182 (366)
T ss_pred ceEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccccC---
Confidence 98888764 38899999998889999999999998766 889999999999999999999996422211
Q ss_pred CCCcccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968 236 VPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS 305 (319)
Q Consensus 236 ~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~ 305 (319)
++ .....|++.|+||.++.+ +++.||++++++ ++.++++..+.. ....+++.|+++..
T Consensus 183 -p~----~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~ 242 (366)
T PRK08247 183 -PL----EEGADIVIHSATKYLGGHNDVLAGLVVAKGQ-------ELCERLAYYQNAAGAVLSPFDSWLLIR 242 (366)
T ss_pred -ch----hcCCcEEEeecceeccCCCceeeeEEecChH-------HHHHHHHHHHHhcCCCCChHHHHHHHh
Confidence 11 123459999999998764 579999987542 477777766553 34556777766544
No 155
>PLN02483 serine palmitoyltransferase
Probab=99.86 E-value=4.2e-20 Score=174.84 Aligned_cols=233 Identities=17% Similarity=0.165 Sum_probs=159.5
Q ss_pred CCCeEeccCCCCCCCCC--CCCcHHHHHHHHHHhhc--CCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968 44 TRPLIPLGHGDPSAFPS--FRTASVAVDAIVHSVRS--ARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~--~~~~~~~~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~ 119 (319)
..+++||++.+.-.+.. ..+.+.+.+++.+.-.. ..-..|+...++.++++.+|++++ .++.+++++|
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~~G- 170 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFGMG- 170 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEECCH-
Confidence 56788998887432221 22345666666654221 112347777789999999999994 2456666665
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-------cC-----ceEE
Q 020968 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-------EN-----TVAL 187 (319)
Q Consensus 120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-------~~-----~~~v 187 (319)
..++..++.+++++||.|++++|+|..+...++..|++++.++.+ |.+.+++.++ ++ .+++
T Consensus 171 ~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~l 243 (489)
T PLN02483 171 YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKII 243 (489)
T ss_pred HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEE
Confidence 555667788899999999999999999999999999999988753 4555555443 11 2445
Q ss_pred EEcC-CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC--CCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968 188 VIIN-PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL 264 (319)
Q Consensus 188 ~l~~-p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~ 264 (319)
+++. ..|++|.+ .++++|+++|+++++++|+||+|+....+ +............+.+|+++||||+|+++|
T Consensus 244 ivve~v~s~~G~~---~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G--- 317 (489)
T PLN02483 244 VIVEGIYSMEGEL---CKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG--- 317 (489)
T ss_pred EEECCCCCCCCcc---cCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---
Confidence 5554 46999998 45999999999999999999999854332 222222333334456799999999998887
Q ss_pred eEEEeeCCCCCccchHHHHHHHHhhh--h--cCCcchHHHHHHHH
Q 020968 265 GWLVTSDPNGILQDSGIVDSIKSFLN--I--SSDPATFIQFLKSS 305 (319)
Q Consensus 265 G~i~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~q~~~~~ 305 (319)
||++++. ++++.++.... . ...+++..|.+++.
T Consensus 318 G~i~~~~--------~li~~l~~~~~~~~~~~~~~p~~~~~~~aa 354 (489)
T PLN02483 318 GYIAGSK--------ELIQYLKRTCPAHLYATSMSPPAVQQVISA 354 (489)
T ss_pred eEEEcCH--------HHHHHHHHhCccccccCCcCHHHHHHHHHH
Confidence 9998753 58888876532 1 12344555554443
No 156
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=1.2e-20 Score=175.05 Aligned_cols=246 Identities=16% Similarity=0.152 Sum_probs=165.7
Q ss_pred CCCCeEeccCCCCCCCCCCCC-cHHHHHHHHHHhhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRT-ASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~ 119 (319)
.+..+++|..|.+..+ ++. +|.+.+++.++++... ...|.+..+ .+|.+.+++++ +. .+.+++++++|+
T Consensus 41 dg~~~lD~~s~~~~~~--lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~----~~-~~~~~v~~~~sg 112 (398)
T PRK03244 41 DGKEYLDLLGGIAVNA--LGHAHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL----GA-PEGGRVFFCNSG 112 (398)
T ss_pred CCCEEEECCcCHhhcc--CCCCCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC----CC-CCCCEEEEeCch
Confidence 4677899988754322 333 7999999999887532 234654322 34555555443 31 135799999999
Q ss_pred HHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHh-hCCCe------------EEEEeccCCCCCcCCHHHHHhhhccCce
Q 020968 120 TQAIEVILTVLARPG-ANILLPRPGFPYYEARAT-HSHLE------------VRHFDLLPAKGWEVDLDAVEALADENTV 185 (319)
Q Consensus 120 t~ai~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~-~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 185 (319)
++|+..+++....+| ++|+..+++|+.+...+. ..|.. +..++. .|++.+++.+.++++
T Consensus 113 sea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~~ 185 (398)
T PRK03244 113 AEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDTA 185 (398)
T ss_pred HHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCeE
Confidence 999999999766566 577777788987643333 22211 111111 378999998877788
Q ss_pred EEEEcCCCCccccccCHHH-HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968 186 ALVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL 264 (319)
Q Consensus 186 ~v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~ 264 (319)
+|+++.++||+|.+++.++ +++|.++|+++|+++|+||+|.++...+..+ .+......+++ .+|||+++ +|+|+
T Consensus 186 aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~i 260 (398)
T PRK03244 186 AVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLPI 260 (398)
T ss_pred EEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCccc
Confidence 8999888999999987655 9999999999999999999999876655322 11112222223 37899986 89999
Q ss_pred eEEEeeCCCCCccchHHHHHHHHh-hhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968 265 GWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQFLKSSRK--LKRNSFLKS 316 (319)
Q Consensus 265 G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l--~~~~~~~~~ 316 (319)
||+++++ ++++.+... .....+.+++.|.++...+ +.++++.++
T Consensus 261 g~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~ 307 (398)
T PRK03244 261 GACLAFG--------PAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLEN 307 (398)
T ss_pred EEEEEcH--------HHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHH
Confidence 9999864 466665542 2234467888888887754 234455443
No 157
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.86 E-value=3.7e-20 Score=171.17 Aligned_cols=210 Identities=16% Similarity=0.165 Sum_probs=150.8
Q ss_pred CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 020968 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR 141 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~ 141 (319)
+..+...+++........+.+|+. +...+|++.++++. ..++.+++++++.|+..++.+++++||+|+++.
T Consensus 46 ~~~~~~~~~~~~~~~~~~Y~r~~~-p~~~~le~~lA~l~--------g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~ 116 (403)
T PRK07810 46 ESAAAAEAAFTGELDRFVYSRYGN-PTVSMFEERLRLIE--------GAEACFATASGMSAVFTALGALLGAGDRLVAAR 116 (403)
T ss_pred CCHHHHHHHhccCcCCcceeCCCC-chHHHHHHHHHHHh--------CCCcEEEECChHHHHHHHHHHHhCCCCEEEEcc
Confidence 444444444432222222344543 45789999999998 345788999999999999999999999999988
Q ss_pred CCC----cchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCC
Q 020968 142 PGF----PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI 217 (319)
Q Consensus 142 p~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~ 217 (319)
..| ..+...++..|+++..++. .|++++++++++++++|++++|+||+|.+.+ +++|+++|+++|+
T Consensus 117 ~~~~~t~~~~~~~~~~~G~~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~ 186 (403)
T PRK07810 117 SLFGSCFVVCNEILPRWGVETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGA 186 (403)
T ss_pred CCcchHHHHHHHHHHHcCcEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCC
Confidence 655 3344567788999988864 3889999999888999999999999999965 9999999999999
Q ss_pred EEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHHhh-hhcCCc
Q 020968 218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFL-NISSDP 295 (319)
Q Consensus 218 ~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 295 (319)
++|+|++|....+.. ++ .. +..+++.|++|.++.+|.++ |+++++++ .+.++++... ......
T Consensus 187 ~vivD~a~a~~~~~~----~~-~~---gaDivv~S~tK~l~g~g~~~gG~v~~~~~-------~~~~~l~~~~~~~g~~~ 251 (403)
T PRK07810 187 KVVLDNVFATPLLQR----GL-PL---GADVVVYSGTKHIDGQGRVLGGAILGDRE-------YIDGPVQKLMRHTGPAL 251 (403)
T ss_pred EEEEECCCCccccCC----hh-hc---CCcEEEccCCceecCCcCceeEEEEeChH-------HHHHHHHHHHHHhCCCC
Confidence 999999998644321 11 11 23488999999999899998 66665431 2333454432 233455
Q ss_pred chHHHHHHHH
Q 020968 296 ATFIQFLKSS 305 (319)
Q Consensus 296 ~~~~q~~~~~ 305 (319)
+++.++++..
T Consensus 252 s~~~a~l~l~ 261 (403)
T PRK07810 252 SAFNAWVLLK 261 (403)
T ss_pred CHHHHHHHHh
Confidence 6666665443
No 158
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=5.7e-20 Score=168.64 Aligned_cols=187 Identities=17% Similarity=0.211 Sum_probs=143.0
Q ss_pred CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCe
Q 020968 82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLE 157 (319)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~ 157 (319)
+|+ .+....|++++|++. ..+++++++|+++|+..++.+++++||+|+++.|.|...... ....|++
T Consensus 49 R~~-npt~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~ 119 (388)
T PRK08861 49 RSG-NPNRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFK 119 (388)
T ss_pred CCC-CchHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeE
Confidence 444 346789999999998 358999999999999999999999999999999999864332 2345667
Q ss_pred EEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC
Q 020968 158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237 (319)
Q Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~ 237 (319)
+..++. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+. . +
T Consensus 120 v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~--~--p 185 (388)
T PRK08861 120 VQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ--K--P 185 (388)
T ss_pred EEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC--C--C
Confidence 766642 4889999999889999999999999999987 678888999999999999999864432 1 2
Q ss_pred CcccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHH
Q 020968 238 MGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFL 302 (319)
Q Consensus 238 ~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~ 302 (319)
+ .+. -.+++.|++|.++.+ +...|++++.++ ++.++++..+.. ....+++..+.
T Consensus 186 l-~~G---aDivv~S~tK~l~G~~d~~gG~i~~~~~-------~~~~~~~~~~~~~G~~~~p~~a~l 241 (388)
T PRK08861 186 L-ELG---ADFVIHSTTKYINGHSDVIGGVLITKTK-------EHAEELAWWGNCIGATGTPFDSYM 241 (388)
T ss_pred c-ccC---CCEEEeecceeccCCCcceeEEEEecHH-------HHHHHHHHHHhccCCCCChHHHHH
Confidence 2 122 238999999998875 578898887542 466667655543 34445555443
No 159
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=3.2e-20 Score=171.15 Aligned_cols=173 Identities=17% Similarity=0.197 Sum_probs=134.4
Q ss_pred CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCe
Q 020968 82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLE 157 (319)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~ 157 (319)
+|+ .+...+|++.+|++++ .+..+++++++.|+..++.+++++||+|+++.|.|... ...+...|++
T Consensus 55 r~~-~p~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~ 125 (391)
T TIGR01328 55 RLG-NPTVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQ 125 (391)
T ss_pred CCC-CchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeE
Confidence 444 3456789999999983 34578888889999999999999999999999988643 3445668888
Q ss_pred EEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC
Q 020968 158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237 (319)
Q Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~ 237 (319)
+..++.+ |++++++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|....... +
T Consensus 126 ~~~vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~----~ 191 (391)
T TIGR01328 126 VDFINMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN----P 191 (391)
T ss_pred EEEECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC----c
Confidence 8877752 789999999888999999999999999966 8889999999999999999998643321 1
Q ss_pred CcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh
Q 020968 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF 288 (319)
Q Consensus 238 ~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 288 (319)
+. . ...+++.|+||.++++|.++|++++.+ ++++++++..
T Consensus 192 ~~-~---g~Divv~S~sK~lgg~g~~~gG~v~~~-------~~li~~l~~~ 231 (391)
T TIGR01328 192 VA-L---GVDVVVHSATKYIGGHGDVVAGLICGK-------AELLQQIRMV 231 (391)
T ss_pred hh-c---CCCEEEccccccccCCCCceEEEEEcC-------HHHHHHHHHH
Confidence 21 1 223889999999999998865444433 2477777653
No 160
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.86 E-value=4.7e-20 Score=168.61 Aligned_cols=190 Identities=16% Similarity=0.121 Sum_probs=140.7
Q ss_pred CCCcHHHHHHHHHHhhcCCCCCCCCC-cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 020968 61 FRTASVAVDAIVHSVRSARFNCYSST-VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL 139 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~ 139 (319)
.++++.+.+++.+.+.. ..|... .-.+++++.+++++ |.. ..+.+++++|+++++..++.+++++||+|++
T Consensus 8 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~----g~~-~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~ 79 (356)
T cd06451 8 SNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVF----QTE-NGLTFLLSGSGTGAMEAALSNLLEPGDKVLV 79 (356)
T ss_pred cCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHh----cCC-CCCEEEEecCcHHHHHHHHHHhCCCCCEEEE
Confidence 47788999988654321 122211 11446666666666 221 3345788999999999999999999999999
Q ss_pred cCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcC
Q 020968 140 PRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216 (319)
Q Consensus 140 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~ 216 (319)
+.++|.. +...++..|++++.++.++ ++.+|++++++.+++ +++++++++|+||+|.+++ +++|.++|+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~ 154 (356)
T cd06451 80 GVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKHD 154 (356)
T ss_pred ecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhcC
Confidence 9887765 4567888999999998754 357899999999986 8899999999999999977 778889999999
Q ss_pred CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 217 ~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+++++|++|.. +..+.++... +..+++.|++|+++.| .++||++.++
T Consensus 155 ~~li~D~~~~~----g~~~~~~~~~---~~d~~~~s~~K~l~~p-~g~G~l~~~~ 201 (356)
T cd06451 155 ALLIVDAVSSL----GGEPFRMDEW---GVDVAYTGSQKALGAP-PGLGPIAFSE 201 (356)
T ss_pred CEEEEeeehhc----cCcccccccc---CccEEEecCchhccCC-CCcceeEECH
Confidence 99999998763 2122222222 2236678999998765 3589999853
No 161
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.86 E-value=5.7e-20 Score=169.28 Aligned_cols=201 Identities=15% Similarity=0.164 Sum_probs=150.5
Q ss_pred eccCCCCCCCCCCCCcHHHHHHHHHHhhcCC----CCCCCC----CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSAR----FNCYSS----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 49 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
.|+.+... +++|+.+.+++.+.+.... ...|.. ..+..++|+.++++++. . ..++|++|+|++
T Consensus 2 yld~a~~~----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~-~~~~v~~~~g~t 72 (376)
T TIGR01977 2 YFDNAATT----YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA----P-SSAHVVFTNNAT 72 (376)
T ss_pred CccCcccC----CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc----C-CCCeEEEeCCHH
Confidence 45555432 5778899999988776532 112322 14567888888888832 1 335899999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc
Q 020968 121 QAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196 (319)
Q Consensus 121 ~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt 196 (319)
++++.++.+++++||+|++..+.|..+. ..++..|.+++.++.+. ++.+|+++++++++++++++++++|+|||
T Consensus 73 ~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~t 150 (376)
T TIGR01977 73 TALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVT 150 (376)
T ss_pred HHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCc
Confidence 9999999999899999999999987653 35566799999888753 45689999999998889999999999999
Q ss_pred ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
|.+++ +++|.++|+++|+++|+|++++... .+..+.. ..-.+++.|++|+++.|. .+|.+++.+
T Consensus 151 G~~~~---~~~i~~l~~~~~~~livD~a~~~g~----~~~~~~~---~~~D~~~~s~~K~l~~p~-g~g~l~~~~ 214 (376)
T TIGR01977 151 GTILP---IEEIGELAQENGIFFILDAAQTAGV----IPIDMTE---LAIDMLAFTGHKGLLGPQ-GTGGLYIRE 214 (376)
T ss_pred cccCC---HHHHHHHHHHcCCEEEEEhhhccCc----cCCCchh---cCCCEEEecccccccCCC-CceEEEEcC
Confidence 99987 6788899999999999999997632 1112221 123488999999976553 356665544
No 162
>PRK06460 hypothetical protein; Provisional
Probab=99.86 E-value=6.1e-20 Score=168.54 Aligned_cols=172 Identities=16% Similarity=0.179 Sum_probs=128.2
Q ss_pred CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC----cchHHHHhhCCCeEEEE
Q 020968 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF----PYYEARATHSHLEVRHF 161 (319)
Q Consensus 86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~----~~~~~~~~~~g~~~~~~ 161 (319)
++...+|++.++++++. . ..++ ++++++|+..++.+++++||+|+++.|.| ..+...++..|+++..+
T Consensus 44 ~p~~~~L~~~lA~l~g~------~-~~v~-~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~ 115 (376)
T PRK06460 44 NPTVLELTKKIVELENA------E-MGVA-FSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS 115 (376)
T ss_pred CccHHHHHHHHHHHhCC------C-cEEE-eCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence 45778999999999832 2 3344 45567999999999999999999998655 34556778889998877
Q ss_pred eccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968 162 DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (319)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 241 (319)
+.+ +.+.+++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..... . .+ +
T Consensus 116 ~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~~-~---~~---l 178 (376)
T PRK06460 116 NPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPIN-Q---KP---L 178 (376)
T ss_pred CCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCcccc-C---Ch---h
Confidence 642 233455555678899999999999999988 56788899999999999999976321 1 11 1
Q ss_pred CCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968 242 GSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 242 ~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 291 (319)
. .+..+++.|+||+++.+ |.++||++++ ++++++++..+..
T Consensus 179 ~-~~~divv~S~sK~l~G~~~~~~G~~~~~--------~~l~~~l~~~~~~ 220 (376)
T PRK06460 179 E-LGADIVVHSASKFLAGHNDVIAGLAAGY--------GKLLNVIDQMRRT 220 (376)
T ss_pred h-cCCCEEEeecceeccCCCCceEEEEecC--------HHHHHHHHHHHHh
Confidence 1 13459999999998644 4789999874 2577877766553
No 163
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.85 E-value=1.3e-19 Score=167.11 Aligned_cols=188 Identities=15% Similarity=0.114 Sum_probs=136.0
Q ss_pred CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCC
Q 020968 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHL 156 (319)
Q Consensus 81 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~ 156 (319)
.+|+ ++...+|++.+++++. .+..+++++++.|+..++.+++++||+|+++.|.|......+ ...|+
T Consensus 56 ~r~~-~pt~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi 126 (386)
T PRK06767 56 SRLG-NPTVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMI 126 (386)
T ss_pred cCCC-CcchHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCe
Confidence 3444 4467899999999983 345666667778999999999999999999999887654433 34455
Q ss_pred eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC
Q 020968 157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (319)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 236 (319)
++..++. .|++++++++++++++|++++|+||||.+++ +++|.++|+++|+++++|++|....+. .
T Consensus 127 ~~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~----~ 192 (386)
T PRK06767 127 THSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ----R 192 (386)
T ss_pred EEEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC----C
Confidence 5544432 3789999999888999999999999999976 788899999999999999999753322 1
Q ss_pred CCcccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHH-Hhhh-hcCCcchHHHHHH
Q 020968 237 PMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIK-SFLN-ISSDPATFIQFLK 303 (319)
Q Consensus 237 ~~~~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~q~~~ 303 (319)
++. . ...+++.|+||.++.+|.|+ ||+++++ +++.++. ..+. .....+++.++++
T Consensus 193 pl~-~---g~Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~ 250 (386)
T PRK06767 193 PLE-L---GCDAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLL 250 (386)
T ss_pred chh-c---CCcEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 121 1 22388899999999999986 8888754 3555443 3333 2333455555443
No 164
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.85 E-value=5e-20 Score=169.50 Aligned_cols=190 Identities=23% Similarity=0.232 Sum_probs=144.7
Q ss_pred CCcHHHHHHHHHHhhcCCCC-CCCC-------CcCCHHHHHHHHHHHhhhCCCCCC-CCcEEEeCCHHHHHHHHHHHhcC
Q 020968 62 RTASVAVDAIVHSVRSARFN-CYSS-------TVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCTQAIEVILTVLAR 132 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~-~Y~~-------~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~~~G~t~ai~~~~~~l~~ 132 (319)
++++.+.+++.+.+.....+ ..+. .....++|+.+++++. .+ ++++++|+|++++++.++.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~~ 83 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLGR 83 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence 66788999998876432110 0000 1234578888888873 34 67899999999999999999977
Q ss_pred ---CCCEEEEcCCCCcch----HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHH
Q 020968 133 ---PGANILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (319)
Q Consensus 133 ---~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l 205 (319)
+|++|+++++.|... ...++..|++++.++.+ .++.+|++++++.+.+++++|++++++||||.+.+ +
T Consensus 84 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~ 158 (373)
T cd06453 84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---V 158 (373)
T ss_pred cCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---H
Confidence 899999999999773 34556789999999875 34579999999999888999999999999999977 7
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
++|+++|+++|+++++|++|.... .+..+... ...+++.|++|+++. .++||+++++
T Consensus 159 ~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~--~g~g~~~~~~ 215 (373)
T cd06453 159 KEIGEIAHEAGVPVLVDGAQSAGH----MPVDVQDL---GCDFLAFSGHKMLGP--TGIGVLYGKE 215 (373)
T ss_pred HHHHHHHHHcCCEEEEEhhhhcCc----eeeecccc---CCCEEEeccccccCC--CCcEEEEEch
Confidence 889999999999999999987422 11122222 223777899999765 5589998854
No 165
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.85 E-value=7.3e-20 Score=167.95 Aligned_cols=186 Identities=17% Similarity=0.187 Sum_probs=144.7
Q ss_pred CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEE
Q 020968 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRH 160 (319)
Q Consensus 85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~ 160 (319)
..+...+|++.+++++ ..+..++++++++|+..++.+++++||+|+++.+.|..... .+...|+++..
T Consensus 38 ~~p~~~~le~~la~l~--------g~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 109 (369)
T cd00614 38 GNPTVDALEKKLAALE--------GGEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTF 109 (369)
T ss_pred CChhHHHHHHHHHHHH--------CCCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence 3456789999999987 23577888899999999999999999999999999987543 34577888877
Q ss_pred EeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240 (319)
Q Consensus 161 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 240 (319)
++.+ |++++++++++++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+...+. .++
T Consensus 110 v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~~-- 173 (369)
T cd00614 110 VDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RPL-- 173 (369)
T ss_pred eCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----Chh--
Confidence 7642 688999999888999999999999999966 889999999999999999999864431 111
Q ss_pred cCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHH
Q 020968 241 FGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLK 303 (319)
Q Consensus 241 ~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~ 303 (319)
..+..+++.|+||.++.+| .+.||++++++ +++++++.... .....+++.++++
T Consensus 174 --~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-------~l~~~l~~~~~~~g~~~~p~~a~~~ 229 (369)
T cd00614 174 --ELGADIVVHSATKYIGGHSDVIAGVVVGSGE-------ALIQRLRFLRLALGTILSPFDAWLL 229 (369)
T ss_pred --hhCCcEEEeccceeccCCCCceEEEEEeCcH-------HHHHHHHHHHHhhCCCCCHHHHHHH
Confidence 1133589999999998876 88999998542 47777776654 3344566655554
No 166
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.85 E-value=1.8e-19 Score=165.86 Aligned_cols=175 Identities=22% Similarity=0.312 Sum_probs=136.7
Q ss_pred CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCC
Q 020968 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHL 156 (319)
Q Consensus 81 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~ 156 (319)
.+|+ .+...+|++.+++++ +.+.+++++++++|+..++.+++++||+|+++.+.|.+. ...+...|+
T Consensus 49 ~r~~-~p~~~~le~~la~l~--------g~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~ 119 (380)
T TIGR01325 49 SRYA-NPTVAAFEERIAALE--------GAERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGI 119 (380)
T ss_pred ecCC-CchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCC
Confidence 3454 345789999999987 235788999999999999999999999999999888653 345677899
Q ss_pred eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC
Q 020968 157 EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV 236 (319)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~ 236 (319)
++..++.+ |++++++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|....+..
T Consensus 120 ~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~---- 185 (380)
T TIGR01325 120 EVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQ---- 185 (380)
T ss_pred EEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC----
Confidence 98887752 788999988888999999999999999965 8999999999999999999998644321
Q ss_pred CCcccCCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHHhhh
Q 020968 237 PMGVFGSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 237 ~~~~~~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~ 290 (319)
++ .. ...+++.|+||.++.+|.++ |++++++ +++++++....
T Consensus 186 pl-~~---g~Divv~S~sK~l~g~g~~~gG~vv~~~--------~~~~~l~~~~~ 228 (380)
T TIGR01325 186 PL-KL---GADVVVYSATKHIDGQGRVMGGVIAGSE--------ELMAEVAVYLR 228 (380)
T ss_pred ch-hh---CCCEEEeeccceecCCCCeEEEEEEeCH--------HHHHHHHHHHH
Confidence 11 11 23488899999999999887 5555432 46666665543
No 167
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.85 E-value=3e-19 Score=164.24 Aligned_cols=217 Identities=24% Similarity=0.305 Sum_probs=169.6
Q ss_pred cHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--CC--CCCC----CcCCHHHHHHHHH
Q 020968 27 TVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--FN--CYSS----TVGILPARRAIAD 98 (319)
Q Consensus 27 ~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--~~--~Y~~----~~g~~~lr~~ia~ 98 (319)
.+|+-+..+.+.. +.+++.|+.+.-. ..|..+.+++.+...... .+ .|.. +..+++.|+.+++
T Consensus 7 ~~r~~fp~l~~~~----~~~~vylD~aa~~-----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~ 77 (405)
T COG0520 7 AVRADFPALKREV----GKPLVYLDNAATS-----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVAR 77 (405)
T ss_pred HHHhhCHHHhhcc----CCCeEEecCcccc-----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHH
Confidence 3566666554433 5678889888754 468899999998764321 11 1111 1235788888999
Q ss_pred HHhhhCCCCCC-CCcEEEeCCHHHHHHHHHHHh---cCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCc
Q 020968 99 YLNRDLPYKLS-PDDVYLTLGCTQAIEVILTVL---ARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWE 170 (319)
Q Consensus 99 ~~~~~~g~~~~-~~~i~~~~G~t~ai~~~~~~l---~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~ 170 (319)
++ +.+ .++|++|.|+|+++++++.++ .++||+|++..-.|++ +...++..|+++..++.+ +++.
T Consensus 78 ~~------~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~ 149 (405)
T COG0520 78 FL------NADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGL 149 (405)
T ss_pred Hh------CCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCC
Confidence 88 446 589999999999999999998 5899999999988865 566667789999999986 4457
Q ss_pred CCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968 171 VDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (319)
Q Consensus 171 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~ 250 (319)
++.+.++..+++++++|.+++.+|.||.+. ++++|+++|+++|+++++|.+++. ++.+..++.++-+ +++
T Consensus 150 ~~~~~~~~~i~~~Tklvais~vSn~tG~~~---pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~D---f~a 219 (405)
T COG0520 150 LDLDALEKLITPKTKLVALSHVSNVTGTVN---PVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCD---FLA 219 (405)
T ss_pred cCHHHHHHhcCCCceEEEEECccccccccc---hHHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCC---EEE
Confidence 999999999999999999999999999994 599999999999999999999987 4455556555443 999
Q ss_pred ecCccccCCCcceeeEEEeeC
Q 020968 251 GSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 251 ~s~sK~~~~~G~r~G~i~~~~ 271 (319)
.|.+|++..| ..+|.+.+++
T Consensus 220 fsgHKwl~gP-~GiGvLy~r~ 239 (405)
T COG0520 220 FSGHKWLLGP-TGIGVLYVRK 239 (405)
T ss_pred EcccccccCC-CceEEEEEch
Confidence 9999966666 2378888754
No 168
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.85 E-value=4e-19 Score=165.13 Aligned_cols=231 Identities=16% Similarity=0.171 Sum_probs=158.7
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC------CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
..+++|+.++ |..+...|.+++++.++++..... .|+......+|++.+++++. .+..+++++
T Consensus 45 ~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~s 113 (402)
T TIGR01821 45 KDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFTS 113 (402)
T ss_pred eeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEECc
Confidence 5688999988 445788999999999988763221 12333345678888888872 235666666
Q ss_pred HHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcCC
Q 020968 119 CTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINP 192 (319)
Q Consensus 119 ~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p 192 (319)
+++++..++..+.. +|+.|+.....|......+...|.++..++. .|.+++++.++ +++++|++++|
T Consensus 114 G~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~~ 186 (402)
T TIGR01821 114 GYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFESV 186 (402)
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence 78888888887764 6777777666776666667777877655432 36777777664 25688999999
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+||+|.+.+ +++|.++|+++|+++|+||+|....++........... .....++++||||.|+++| ||+++++
T Consensus 187 ~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~ 260 (402)
T TIGR01821 187 YSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASR 260 (402)
T ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCH
Confidence 999999976 89999999999999999999984433321111111111 1123588899999999888 9988753
Q ss_pred CCCCccchHHHHHHHHhhhh---cCCcchHHHHHHHHHH
Q 020968 272 PNGILQDSGIVDSIKSFLNI---SSDPATFIQFLKSSRK 307 (319)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l 307 (319)
++++.++..... +...++..+.++..++
T Consensus 261 --------~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL 291 (402)
T TIGR01821 261 --------KLIDAIRSYAPGFIFTTSLPPAIAAGATASI 291 (402)
T ss_pred --------HHHHHHHHhCcCceecCcCCHHHHHHHHHHH
Confidence 477777654321 2345666666655443
No 169
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.6e-19 Score=166.17 Aligned_cols=179 Identities=16% Similarity=0.157 Sum_probs=137.5
Q ss_pred CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---hhCCCeEEEEe
Q 020968 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA---THSHLEVRHFD 162 (319)
Q Consensus 86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~ 162 (319)
.+...+|++.+++++ ..+++++++|+++|+..++.+++++||+|+++.|.|..+...+ ...|+++..+.
T Consensus 52 np~~~~lE~~lA~l~--------g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~ 123 (385)
T PRK08574 52 NPTLRPLEEALAKLE--------GGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY 123 (385)
T ss_pred CccHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC
Confidence 346789999999998 3467888999999999999999999999999999998876655 44576665543
Q ss_pred ccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968 163 LLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 241 (319)
+|++++++++++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|...... .++ ..
T Consensus 124 --------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~----~~l-~~ 187 (385)
T PRK08574 124 --------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY----RPL-RH 187 (385)
T ss_pred --------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC----Chh-hh
Confidence 368899999987 8999999999999999977 788999999999999999999642211 111 11
Q ss_pred CCCCCeEEEecCccccCCCccee-eEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchH
Q 020968 242 GSIVPVLTLGSISKRWIVPGWRL-GWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATF 298 (319)
Q Consensus 242 ~~~~~vi~~~s~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 298 (319)
+..+++.|+||.++.+|-.+ |++++.++ ++.++++..+.. ....+++
T Consensus 188 ---GaDivv~S~sK~l~g~~d~~gG~vi~~~~-------~~~~~~~~~~~~~g~~~~p~ 236 (385)
T PRK08574 188 ---GADFVVHSLTKYIAGHNDVVGGVAVAWSG-------EFLEELWEWRRRLGTIMQPF 236 (385)
T ss_pred ---CCcEEEeeCceeecCCCCceeEEEEECcH-------HHHHHHHHHHHhcCCCCCHH
Confidence 23499999999998888765 65666442 467776655543 3344444
No 170
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.85 E-value=1.8e-19 Score=165.34 Aligned_cols=195 Identities=20% Similarity=0.332 Sum_probs=145.9
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCC
Q 020968 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRP 142 (319)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p 142 (319)
.+...+++.+.+.++.. ++. ..+++++.+++.+.. +.+++++|+|+++|+.+++.++ .++||+|+++.+
T Consensus 10 ~~~e~~a~~~~~~~~~~--~~~----g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~ 79 (376)
T TIGR02379 10 TGQELEYIAEAISEGKL--SGD----GPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSY 79 (376)
T ss_pred CHHHHHHHHHHHHcCCc--cCC----cHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCC
Confidence 45667888888776543 221 233444444444432 4568999999999999999987 789999999999
Q ss_pred CCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222 (319)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 222 (319)
+|..+...+...|++++.+++++ +++.+|++++++++++++++|+ |+||+|...+ +++|.++|+++|++||+|
T Consensus 80 t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeD 152 (376)
T TIGR02379 80 TFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIED 152 (376)
T ss_pred CcHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEE
Confidence 99999888899999999999865 4578999999999988888876 5668898865 789999999999999999
Q ss_pred CCCCCcc-CCCCCCCCCcccCCCCCeEEEecC--ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968 223 EVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 223 ~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 290 (319)
++|+... +++... ..+.. +.+.|| +|.+ .+|.+.|+++++++ ++.++++..+.
T Consensus 153 aa~~~g~~~~~~~~---g~~~~----~~~fSf~~~K~l-~~g~~gG~v~~~~~-------~~~~~~~~~~~ 208 (376)
T TIGR02379 153 AAQGVMSTYKGRAL---GSIGH----LGTFSFHETKNY-TSGGEGGALLINDQ-------AFIERAEIIRE 208 (376)
T ss_pred CccccCCccCCccc---CCCCC----EEEEeCCCCCcC-cccCCceEEEECCH-------HHHHHHHHHHH
Confidence 9998765 444322 12211 333443 3664 56778999998763 58888877654
No 171
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.84 E-value=7.5e-20 Score=170.23 Aligned_cols=159 Identities=23% Similarity=0.198 Sum_probs=131.6
Q ss_pred cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEe
Q 020968 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD 162 (319)
Q Consensus 87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~ 162 (319)
+...+|++.+++++ ..+..++++++++|+..++.+++++||+|+++.+.|.+. ...+...|++++.++
T Consensus 57 p~~~~le~~lA~l~--------g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~ 128 (418)
T TIGR01326 57 PTTDVLEQRIAALE--------GGVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVD 128 (418)
T ss_pred hhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEEC
Confidence 45678999999988 235789999999999999999999999999999998653 345677899988887
Q ss_pred ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 242 (319)
. .|++.+++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+.... ..++
T Consensus 129 ~-------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~----~~~l---- 190 (418)
T TIGR01326 129 P-------DDPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL----CRPI---- 190 (418)
T ss_pred C-------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc----CCch----
Confidence 4 2889999999888999999999999999965 88999999999999999999974221 1111
Q ss_pred CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
..+..+++.|+||.++.+|+|+||++++.
T Consensus 191 ~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 191 DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred hcCCeEEEECccccccCCccceEEEEEec
Confidence 12356999999999999999999999864
No 172
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=8.5e-20 Score=162.50 Aligned_cols=170 Identities=19% Similarity=0.184 Sum_probs=133.4
Q ss_pred CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (319)
Q Consensus 85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 164 (319)
|..-+.++++.+|++++. .+.+++++|+++++..++.+++++||+|+++.++|.+....+...|++++.++..
T Consensus 57 ~~g~i~~~~~~~A~~~ga-------~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~ 129 (294)
T cd00615 57 PTGPIKEAQELAARAFGA-------KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPE 129 (294)
T ss_pred CChHHHHHHHHHHHHhCC-------CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCc
Confidence 444578899999998832 2345569999999999999999999999999999999888889999999888765
Q ss_pred CCCC----CcCCHHHHHhhhc--cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCC
Q 020968 165 PAKG----WEVDLDAVEALAD--ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVP 237 (319)
Q Consensus 165 ~~~~----~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~ 237 (319)
...+ ..+|+++++++++ ++++++++++| |++|.+++ +++|+++|+++|+++|+|++|+. +.+.+..+..
T Consensus 130 ~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~ 205 (294)
T cd00615 130 RNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS 205 (294)
T ss_pred cCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcc
Confidence 4433 3689999999986 36789999998 68999976 88999999999999999999985 3343322111
Q ss_pred CcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 238 ~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
....+..+++.|++|+ ++|++.|+++..
T Consensus 206 ---~~~~~~div~~S~hK~--l~g~~~~~~l~~ 233 (294)
T cd00615 206 ---AAMAGADIVVQSTHKT--LPALTQGSMIHV 233 (294)
T ss_pred ---hhhcCCcEEEEchhcc--cchHhHHHHHHh
Confidence 1122456999999998 588887666543
No 173
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=4e-19 Score=163.01 Aligned_cols=206 Identities=16% Similarity=0.153 Sum_probs=146.9
Q ss_pred CCCcHHHHHHHHHHhhcCCCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 020968 61 FRTASVAVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl 138 (319)
++.++.+.+++..... . ...|+. .++...||+.++++. ..+++++++|+++|+..++.+++++||+|+
T Consensus 35 ~~~~~~~~~~~~~~~~-~-~~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~GD~Vv 104 (394)
T PRK09028 35 FDTVAEMRHAAKNRAN-G-EMFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKAGDHLL 104 (394)
T ss_pred cCCHHHHHHHhccCcc-C-CceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 4555666655543221 1 124655 334579999999886 235789999999999999999999999999
Q ss_pred EcCCCCcchHHH----HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH
Q 020968 139 LPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (319)
Q Consensus 139 ~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~ 214 (319)
+++|.|.++... +...|+++..++.. +.+.+++++++++++|++++|+||||.+ .++++|+++|++
T Consensus 105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-------~~e~l~~~l~~~TklV~lespsNPtg~v---~dl~~I~~la~~ 174 (394)
T PRK09028 105 MVDSCYEPTRDLCDKILKGFGIETTYYDPM-------IGEGIRELIRPNTKVLFLESPGSITMEV---QDVPTLSRIAHE 174 (394)
T ss_pred EECCCcHHHHHHHHHhhhhcceEEEEECCC-------CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHH
Confidence 999999776543 34577777765431 5578898888899999999999999988 779999999999
Q ss_pred cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhh-hc
Q 020968 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLN-IS 292 (319)
Q Consensus 215 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~ 292 (319)
+|+++++|++|+.... ..++ .+ +-.+++.|.+|+++.+ ++..|+++ .+ +++.++++.... ..
T Consensus 175 ~g~~lvvD~t~a~p~~----~~Pl-~~---GaDivv~S~tK~l~Gh~d~~~G~~~-~~-------~~~~~~l~~~~~~~G 238 (394)
T PRK09028 175 HDIVVMLDNTWASPIN----SRPF-EM---GVDISIQAATKYIVGHSDVMLGTAT-AN-------EKHWDQLREHSYLMG 238 (394)
T ss_pred cCCEEEEECCcccccc----CCcc-cc---CceEEEEeCCeEecCCCCEEEEEEE-CC-------HHHHHHHHHHHHhcC
Confidence 9999999999986221 1122 12 3349999999999776 45566554 33 235555554433 23
Q ss_pred CCcchHHHHH
Q 020968 293 SDPATFIQFL 302 (319)
Q Consensus 293 ~~~~~~~q~~ 302 (319)
...++...+.
T Consensus 239 ~~~~p~~a~l 248 (394)
T PRK09028 239 QCTSPDDVYL 248 (394)
T ss_pred CCCCHHHHHH
Confidence 3445555443
No 174
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.84 E-value=6.1e-19 Score=164.17 Aligned_cols=232 Identities=16% Similarity=0.148 Sum_probs=155.3
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~ 117 (319)
+.++++|+..|. ..+..+|.+.+++.+++..... ..|++.....+|++.+++++. .++ .++.+
T Consensus 45 ~~~~~~~~s~dy---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-------~~~-~~~~~ 113 (407)
T PRK09064 45 EREVTVWCSNDY---LGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-------KEA-ALVFT 113 (407)
T ss_pred CceEEEEECCCC---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-------CCc-EEEEC
Confidence 467899999983 4578889999999988765322 123344456788888888772 234 44445
Q ss_pred CHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcC
Q 020968 118 GCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIIN 191 (319)
Q Consensus 118 G~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~ 191 (319)
++++++..++..+.. +++.|+.....|......+...+.++..++. .|++.+++.++ +++++|++++
T Consensus 114 sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~ 186 (407)
T PRK09064 114 SGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFES 186 (407)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeC
Confidence 556677777776654 6776666666666666666777777654442 37778877765 4578999999
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEee
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
++||+|.+.+ +++|.++|+++|+++|+||+|....++............ ....|+++||||.|+++| ||++++
T Consensus 187 v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~ 260 (407)
T PRK09064 187 VYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS 260 (407)
T ss_pred CCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC
Confidence 9999999966 899999999999999999999843333221111111111 133688999999999888 998874
Q ss_pred CCCCCccchHHHHHHHHhhhh---cCCcchHHHHHHHHHH
Q 020968 271 DPNGILQDSGIVDSIKSFLNI---SSDPATFIQFLKSSRK 307 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l 307 (319)
. ++++.++..... +...++..+.++...+
T Consensus 261 ~--------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al 292 (407)
T PRK09064 261 A--------ALVDAVRSYAPGFIFTTSLPPAIAAAALASI 292 (407)
T ss_pred H--------HHHHHHHHhCccccccCcCCHHHHHHHHHHH
Confidence 3 467766654321 2344555665554433
No 175
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.84 E-value=1.4e-19 Score=158.96 Aligned_cols=266 Identities=20% Similarity=0.270 Sum_probs=154.9
Q ss_pred ccccHHHHHHHHHHHhhhcCCCCe-EeccCCCCCCCCCCCCcHHHHHHHHH--Hh-hcCCCCCC-CCCcCCHHHHHHHHH
Q 020968 24 SGITVRGVLNSLLENLNKNDTRPL-IPLGHGDPSAFPSFRTASVAVDAIVH--SV-RSARFNCY-SSTVGILPARRAIAD 98 (319)
Q Consensus 24 ~~~~i~~~~~~~~~~~~~~~~~~~-i~l~~g~~~~~~~~~~~~~~~~a~~~--~~-~~~~~~~Y-~~~~g~~~lr~~ia~ 98 (319)
+..++.+..+++++.+.+.+..++ +||+-|-|.. .++.+...+...... .. +.-+..+| +...|++++|+.+++
T Consensus 2 s~~eL~~~~~~l~~~y~~~ka~~L~LdmtRGKPs~-eQLdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r~l~a~ 80 (425)
T PF12897_consen 2 SKEELAALLAELRKQYEELKAKGLKLDMTRGKPSP-EQLDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEARELFAE 80 (425)
T ss_dssp ----HHHCHHHHHHHHHHHHHTT--EES---S--H-HHHHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCH-HHHhhhHHHhcCCCCccccCCCccccCCCCccCChHHHHHHHHH
Confidence 345666666666666666656665 7888888651 011111112111100 00 11134689 888899999999999
Q ss_pred HHhhhCCCCCCCCcEEEeCCHHHHH-HHHH-HHh----c--------CCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968 99 YLNRDLPYKLSPDDVYLTLGCTQAI-EVIL-TVL----A--------RPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (319)
Q Consensus 99 ~~~~~~g~~~~~~~i~~~~G~t~ai-~~~~-~~l----~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 164 (319)
++ .++.++|++..+++-.| +-++ .++ . .+.-+.++|.|.|..+..+++..|++.+.||+.
T Consensus 81 ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giemi~VpM~ 154 (425)
T PF12897_consen 81 LL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEMIPVPMT 154 (425)
T ss_dssp HH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EEEEEEEE
T ss_pred Hh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEEEecCCC
Confidence 99 67999999987765443 2222 222 1 113478999999999999999999999999997
Q ss_pred CCCCCcCCHHHHHhhhc--cCceEEEEcCC--CCccccccCHHHHHHHHHH-HHHcCCEEEEeCCCCCccCC-CCCCCC-
Q 020968 165 PAKGWEVDLDAVEALAD--ENTVALVIINP--GNPCGNVYTYQHLQKIAET-AKKLGIMVIADEVYDHLAFG-NTPFVP- 237 (319)
Q Consensus 165 ~~~~~~~d~~~l~~~l~--~~~~~v~l~~p--~nptG~~~~~~~l~~i~~~-~~~~~~~li~D~a~~~~~~~-~~~~~~- 237 (319)
++ ++|.+.+++++. +..+.++ |.| +||||++||.+.+++++.+ ....++.|+.|++|.-.... +.+...
T Consensus 155 ~d---GPDmD~Ve~LV~~D~svKGiW-cVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~ 230 (425)
T PF12897_consen 155 ED---GPDMDMVEELVAEDPSVKGIW-CVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDAL 230 (425)
T ss_dssp TT---EE-HHHHHHHTHTSTTEEEEE-E-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS----
T ss_pred CC---CCCHHHHHHHHhcCCccceEE-eCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhh
Confidence 64 589999999984 3445554 666 8999999999999999998 33579999999999976652 222111
Q ss_pred --Ccc----cCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHHhcc
Q 020968 238 --MGV----FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRKLKR 310 (319)
Q Consensus 238 --~~~----~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~ 310 (319)
+.. ....++++.+.|.||. ..||.+|+++.++. +-++.++++.+. +.++..+.|..-.+ ++++
T Consensus 231 ~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--------~Nl~~~~~~~~~~tIgpdKvNQLRHvr-ff~d 300 (425)
T PF12897_consen 231 LNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--------ANLAWIKKHLSVQTIGPDKVNQLRHVR-FFKD 300 (425)
T ss_dssp --HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--------HHHHHHHHHHHHH-S---HHHHHHHHH-HHHS
T ss_pred hHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--------HHHHHHHHHhcCceeCccHHHHHHHHH-HhcC
Confidence 111 2455789999999999 79999999999864 456667766663 67899999999888 4443
No 176
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.84 E-value=2.3e-19 Score=164.13 Aligned_cols=196 Identities=16% Similarity=0.156 Sum_probs=148.1
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
-+.+||-+.-- +......+++++.+++.++.+. |. +.+++++++++++.+.+| .+++++++|+|+|+
T Consensus 7 ~~~~ina~g~~-t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al 73 (363)
T TIGR01437 7 LKKVINASGKM-TILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGI 73 (363)
T ss_pred CceEEECCcEe-ecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHH
Confidence 45566655333 2222245889999999988643 32 345777777777776554 35789999999999
Q ss_pred HHHHHHhcCCCC---------------EEEEcCCCCcch----HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc
Q 020968 124 EVILTVLARPGA---------------NILLPRPGFPYY----EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT 184 (319)
Q Consensus 124 ~~~~~~l~~~gd---------------~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 184 (319)
++++.+++++|| +|+++.|.|..| ...+...|+++++++.+ +.+|++++++++++++
T Consensus 74 ~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~~t 149 (363)
T TIGR01437 74 AQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITEKT 149 (363)
T ss_pred HHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcChhc
Confidence 999999999988 899999888765 46778889999888752 3599999999999888
Q ss_pred eEEE-EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968 185 VALV-IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (319)
Q Consensus 185 ~~v~-l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r 263 (319)
++++ +++|+||+|.+.+ +++|+++|+++|+++++|++|+.-. .....+. -.+++.|++|++ +|++
T Consensus 150 ~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g---~D~~~~S~~K~l--~gp~ 215 (363)
T TIGR01437 150 AAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLG---ADLVIYSGAKAI--EGPT 215 (363)
T ss_pred eEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCch------HHHHHcC---CCEEEEeCCccc--CCCc
Confidence 8766 5678999999876 7789999999999999999997211 1111221 238889999984 6778
Q ss_pred eeEEEee
Q 020968 264 LGWLVTS 270 (319)
Q Consensus 264 ~G~i~~~ 270 (319)
.|+++++
T Consensus 216 ~G~l~~~ 222 (363)
T TIGR01437 216 SGLVLGK 222 (363)
T ss_pred eEEEEEc
Confidence 9998874
No 177
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.83 E-value=3.1e-19 Score=159.70 Aligned_cols=205 Identities=18% Similarity=0.211 Sum_probs=169.2
Q ss_pred cCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC----CCCCC--CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968 42 NDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR----FNCYS--STVGILPARRAIADYLNRDLPYKLSPDDVYL 115 (319)
Q Consensus 42 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~Y~--~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~ 115 (319)
+.+.+.+.|+.+..+ +.++.+.+++...+.... ...|+ ...+.++.|+.+|+++ +.++.+|++
T Consensus 39 ~~~~~~vyld~~at~-----p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiF 107 (428)
T KOG1549|consen 39 HHGTRPVYLDNQATG-----PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVF 107 (428)
T ss_pred cCCCccEEEecCcCC-----CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEE
Confidence 457789999999854 788999999998876531 11133 2334788999999999 558888999
Q ss_pred eCCHHHHHHHHHHHhc-CCCC----EEEEcCCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968 116 TLGCTQAIEVILTVLA-RPGA----NILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (319)
Q Consensus 116 ~~G~t~ai~~~~~~l~-~~gd----~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 187 (319)
|+|+|++++++++.+. ..++ +|++..-.|++... ..+..|+++..+|+. ..+.+|.+.+++.++++++++
T Consensus 108 ts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv 185 (428)
T KOG1549|consen 108 TSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLV 185 (428)
T ss_pred eCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEE
Confidence 9999999999999874 3455 89998888877654 446778999999986 445789999999999999999
Q ss_pred EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEE
Q 020968 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWL 267 (319)
Q Consensus 188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i 267 (319)
.+.+.+|.+|++.| +++|+++|+++++.+++|.|++- |+.+..+..++.+ ++..|.+|+|+.+| +|++
T Consensus 186 ~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaL 253 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGAL 253 (428)
T ss_pred EEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEE
Confidence 99999999999966 99999999999999999999987 6666777777654 88889999999999 8998
Q ss_pred EeeC
Q 020968 268 VTSD 271 (319)
Q Consensus 268 ~~~~ 271 (319)
.+..
T Consensus 254 Yvr~ 257 (428)
T KOG1549|consen 254 YVRR 257 (428)
T ss_pred EEcc
Confidence 8763
No 178
>PRK14012 cysteine desulfurase; Provisional
Probab=99.83 E-value=4.5e-19 Score=164.84 Aligned_cols=201 Identities=19% Similarity=0.210 Sum_probs=150.4
Q ss_pred eEeccCCCCCCCCCCCCcHHHHHHHHHHhh--cCCCCCC--CC------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVR--SARFNCY--SS------TVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (319)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~Y--~~------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~ 116 (319)
.+.|+.+... ++++.+.+++.+.+. ....... .. ....+++|+.+++++ +.++++++++
T Consensus 4 ~iyld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~ 72 (404)
T PRK14012 4 PIYLDYSATT-----PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFT 72 (404)
T ss_pred eEEecCcCCC-----CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEe
Confidence 3678877754 677889999988765 2111110 00 123456778888777 4467889999
Q ss_pred CCHHHHHHHHHHHhc----CCCCEEEEcCCCCcchHHHH---hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEE
Q 020968 117 LGCTQAIEVILTVLA----RPGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI 189 (319)
Q Consensus 117 ~G~t~ai~~~~~~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l 189 (319)
+|+|++++.++.++. ++||+|+++.+.|+.+...+ +..|++++.++.++ ++.+|++.++++++++++++++
T Consensus 73 ~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~ 150 (404)
T PRK14012 73 SGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSI 150 (404)
T ss_pred CCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEE
Confidence 999999999988764 78999999999997765444 34699999888753 4578999999999988999999
Q ss_pred cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (319)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~ 269 (319)
++++||||.+.+ +++|.++|+++|+++|+|++++. +..+..+.... -.+++.|++|.++ |+ ++|++++
T Consensus 151 ~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~----g~~~~~~~~~~---~D~~~~s~~K~~g-p~-g~G~l~~ 218 (404)
T PRK14012 151 MHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSV----GKVPIDLSKLK---VDLMSFSAHKIYG-PK-GIGALYV 218 (404)
T ss_pred ECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhc----CCcccCcccCC---CCEEEEehhhccC-CC-ceEEEEE
Confidence 999999999965 88999999999999999999975 22222333222 2377889999754 44 6899887
Q ss_pred eCC
Q 020968 270 SDP 272 (319)
Q Consensus 270 ~~~ 272 (319)
+++
T Consensus 219 ~~~ 221 (404)
T PRK14012 219 RRK 221 (404)
T ss_pred ecC
Confidence 654
No 179
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.83 E-value=4.7e-19 Score=164.41 Aligned_cols=192 Identities=15% Similarity=0.113 Sum_probs=145.5
Q ss_pred CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 020968 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR 141 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~ 141 (319)
..++.+.+++.+.. . +|. ..+..++++.+++.+.+.+|.. ..+.+++++++++++..++..+.++||+|++.+
T Consensus 19 ~~~~~V~~a~~~~~----~-~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~ 91 (401)
T PLN02409 19 NIPERVLRAMNRPN----E-DHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFR 91 (401)
T ss_pred CCCHHHHHHhcCCC----C-CCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeC
Confidence 56788888775432 1 222 3356778888888887777754 334678889999999999999999999999999
Q ss_pred CCCcch--HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968 142 PGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (319)
Q Consensus 142 p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (319)
+.|... ...++..|++++.++.+.. ..+|++++++.+++ ++++|++++++||||.+++.+++.++++ |+++
T Consensus 92 ~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~ 168 (401)
T PLN02409 92 IGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQH 168 (401)
T ss_pred CCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhcc
Confidence 888654 5677888999999987543 34799999999875 6899999999999999998666666666 9999
Q ss_pred CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 216 GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 216 ~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
|+++++|++++. +..+..+..+ +..+++.|.+|++++|. ++||+++++
T Consensus 169 g~~~vvD~v~s~----g~~~id~~~~---~~D~~~~s~~K~l~~P~-G~G~l~~~~ 216 (401)
T PLN02409 169 PALLLVDGVSSI----GALDFRMDEW---GVDVALTGSQKALSLPT-GLGIVCASP 216 (401)
T ss_pred CcEEEEEccccc----CCcccccccc---CccEEEEcCccccCcCC-CcceeEECH
Confidence 999999999874 2222222222 22377778899986654 699998753
No 180
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.83 E-value=6.9e-19 Score=163.50 Aligned_cols=201 Identities=15% Similarity=0.158 Sum_probs=150.7
Q ss_pred eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCC--CC------CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY--SS------TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y--~~------~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
.+.|+.+... +.++.+.+++.+.+........ .. ....+++|+.+++++ +.++++|++++|
T Consensus 4 ~~yld~aa~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g 72 (402)
T TIGR02006 4 PIYLDYAATT-----PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSG 72 (402)
T ss_pred cEEeeCCcCC-----CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence 3778888754 6788899999887643211111 10 123556777788777 457789999999
Q ss_pred HHHHHHHHHHHhc----CCCCEEEEcCCCCcchHHHH---hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968 119 CTQAIEVILTVLA----RPGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191 (319)
Q Consensus 119 ~t~ai~~~~~~l~----~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~ 191 (319)
++++++.++.++. ++|++|+++.+.|..+...+ +..|.+++.++.+ .++.+|++.+++.++++++++++++
T Consensus 73 ~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~v~~ 150 (402)
T TIGR02006 73 ATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGLIDLEELKAAIRDDTILVSIMH 150 (402)
T ss_pred HHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEEC
Confidence 9999999887763 68999999999998765443 4569999988875 3456899999999988889999999
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
++||||.+.+ +++|.++|+++|+++++|++++. +..+..+... .-.+++.|.+|.++.+| +|++++.+
T Consensus 151 ~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~----g~~~~~~~~~---~~D~~~~s~~K~~gp~G--~G~l~~~~ 218 (402)
T TIGR02006 151 VNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSV----GKIPINVNEL---KVDLMSISGHKIYGPKG--IGALYVRR 218 (402)
T ss_pred CCcCceeccc---HHHHHHHHHHcCCEEEEEcchhc----CCcccCcccc---CCCEEEEehhhhcCCCc--eEEEEEcc
Confidence 9999999965 88999999999999999999975 2222223222 22488889999876446 88887764
Q ss_pred C
Q 020968 272 P 272 (319)
Q Consensus 272 ~ 272 (319)
+
T Consensus 219 ~ 219 (402)
T TIGR02006 219 K 219 (402)
T ss_pred C
Confidence 3
No 181
>PRK05939 hypothetical protein; Provisional
Probab=99.83 E-value=6.4e-19 Score=162.55 Aligned_cols=157 Identities=20% Similarity=0.170 Sum_probs=127.7
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH---HHHhhCCCeEEEEeccC
Q 020968 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLP 165 (319)
Q Consensus 89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~ 165 (319)
...|++.++++. ..+..+++++++.|+..++.+++++||+|+++.+.|..+. ..+...|+++..++.
T Consensus 49 ~~~lE~~la~le--------g~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~-- 118 (397)
T PRK05939 49 TAALEAKITKME--------GGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA-- 118 (397)
T ss_pred HHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC--
Confidence 348888899887 2344566666799999999999999999999999997643 345678999888875
Q ss_pred CCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968 166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (319)
Q Consensus 166 ~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~ 245 (319)
.|++++++++++++++|++++|+||+|.+ .++++|+++|+++|+++|+|++|.... . +. ....+
T Consensus 119 -----~d~e~l~~~l~~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~----~---~~-~~~~g 182 (397)
T PRK05939 119 -----TDVQNVAAAIRPNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPW----L---FR-PKDVG 182 (397)
T ss_pred -----CCHHHHHHhCCCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccccc----c---cC-ccccC
Confidence 38899999999899999999999999999 679999999999999999999986421 0 11 11113
Q ss_pred CeEEEecCccccCCCcceeeEEEeeC
Q 020968 246 PVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 246 ~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
..+++.|+||.++.+|.++|++++.+
T Consensus 183 aDivv~S~sK~~~g~g~~igg~v~~~ 208 (397)
T PRK05939 183 ASLVINSLSKYIAGHGNALGGAVTDT 208 (397)
T ss_pred CEEEEecCeecccCCCCeEEEEEecC
Confidence 46999999999999999999998743
No 182
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.83 E-value=5.3e-19 Score=164.86 Aligned_cols=246 Identities=20% Similarity=0.162 Sum_probs=160.7
Q ss_pred CCCCeEeccCCCCCCCCCCC-CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
.+..+|+|..|..... +. .+|.+.+++.+++... ..|+...+..++...+++.+.+..+ ...+++++++|+++
T Consensus 34 dG~~~id~~~~~~~~~--lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgse 107 (413)
T cd00610 34 DGNRYLDFLSGIGVLN--LGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTE 107 (413)
T ss_pred CCCEEEEcCccHHhhc--cCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence 4678999998743211 23 6789999999988653 2444332344555556666555444 25789999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCC-------------CeEEEEeccCC----CCCcCCHHHHHhhhcc
Q 020968 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHSH-------------LEVRHFDLLPA----KGWEVDLDAVEALADE 182 (319)
Q Consensus 122 ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~----~~~~~d~~~l~~~l~~ 182 (319)
|+..+++.+. .++++|++.++.|+.+.......+ .++..++.+.. ..+..|++.+++.++.
T Consensus 108 a~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 187 (413)
T cd00610 108 AVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEE 187 (413)
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhc
Confidence 9999998774 568999999999988544333221 12344444311 1244588999988875
Q ss_pred --CceEEEEcCC-CCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC
Q 020968 183 --NTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI 258 (319)
Q Consensus 183 --~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~ 258 (319)
+...++++.| ++++|.++ +.+.+++|.++|+++|+++|+||+|.++...+.. .....+..... +.|+||.++
T Consensus 188 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~-~~~~~~~~~~d---~~t~sK~l~ 263 (413)
T cd00610 188 HPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKM-FAFEHFGVEPD---IVTLGKGLG 263 (413)
T ss_pred CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hhHhhcCCCCC---eEEEccccc
Confidence 2334444555 67779876 6677999999999999999999999986443322 11111221112 348899987
Q ss_pred CCcceeeEEEeeCCCCCccchHHHHHH--HHhhh-hcCCcchHHHHHHHHHH
Q 020968 259 VPGWRLGWLVTSDPNGILQDSGIVDSI--KSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
. |+|+||++++. ++++.+ ..... .+.+.+++.|.++..++
T Consensus 264 ~-g~~~g~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l 306 (413)
T cd00610 264 G-GLPLGAVLGRE--------EIMDAFPAGPGLHGGTFGGNPLACAAALAVL 306 (413)
T ss_pred C-ccccEEEEEcH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHH
Confidence 6 79999998743 466665 22222 23456777777665543
No 183
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.82 E-value=6.9e-19 Score=161.07 Aligned_cols=188 Identities=20% Similarity=0.294 Sum_probs=137.4
Q ss_pred CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCC
Q 020968 80 FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSH 155 (319)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g 155 (319)
+.+|+ ++...+|+++++++. . ++.++++++++|+..++.+++++||+|+++.|.|..+...+ +..|
T Consensus 45 y~ry~-~p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G 114 (366)
T PRK07582 45 YGRAS-NPTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG 114 (366)
T ss_pred eECCC-CccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence 33454 557899999999987 2 35666677778999999999999999999999998876544 4578
Q ss_pred CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968 156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF 235 (319)
Q Consensus 156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 235 (319)
++++.++..+. .+ .+.+++++|++++|+||+|.+. ++++|+++|+++|+++++|++|.... +..
T Consensus 115 ~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v~---di~~I~~~a~~~g~~lvVD~t~~~~~--~~~- 178 (366)
T PRK07582 115 VTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDVC---DLAALAAAAHAAGALLVVDNTTATPL--GQR- 178 (366)
T ss_pred EEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCcc---CHHHHHHHHHHcCCEEEEECCCCCcc--ccC-
Confidence 88888876321 11 2235788999999999999885 49999999999999999999996421 222
Q ss_pred CCCcccCCCCCeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968 236 VPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS 305 (319)
Q Consensus 236 ~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~ 305 (319)
++. +.. .++++|+||.++. +|+|+||+++.++ ++.++++..+.. ...++++..+.+..
T Consensus 179 -p~~-~g~---Divv~S~sK~l~G~~g~~~G~v~~~~~-------~l~~~l~~~~~~~g~~~~~~~a~l~~r 238 (366)
T PRK07582 179 -PLE-LGA---DLVVASDTKALTGHSDLLLGYVAGRDP-------ELMAAVERWRLLAGAIPGPFEAWLAHR 238 (366)
T ss_pred -chh-cCC---cEEEecccccccCCCCeeEEEEEcCcH-------HHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence 221 222 3888999999855 6899999997542 477777766553 44556666554444
No 184
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.82 E-value=1.8e-18 Score=159.20 Aligned_cols=193 Identities=18% Similarity=0.170 Sum_probs=148.1
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCC
Q 020968 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRP 142 (319)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p 142 (319)
.+.-.+++.+.+.++.. .++ +...+|++.++++++ .+++++++|+++|+.+++.++ +++||+|+++.+
T Consensus 13 ~~~e~~~~~~~l~~~~~-~~g--~~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~ 81 (379)
T PRK11658 13 GDEELAAVKEVLRSGWI-TTG--PKNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSL 81 (379)
T ss_pred CHHHHHHHHHHHHcCCc-cCC--HhHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCC
Confidence 35567778777766543 233 357899999999993 346888999999999999999 799999999999
Q ss_pred CCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222 (319)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 222 (319)
+|..+...+...|++++.+++++ +++.+|++.+++++++++++|+ |+|++|...+ +++|.++|+++|+++|+|
T Consensus 82 ~~~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D 154 (379)
T PRK11658 82 TWVSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIED 154 (379)
T ss_pred cHHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEE
Confidence 99999888899999999999864 4567999999999988888876 5557898854 889999999999999999
Q ss_pred CCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968 223 EVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL 289 (319)
Q Consensus 223 ~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 289 (319)
++++. ..+.+.. +. ... +.+.||++...+++.+.|+++..++ ++.++++..+
T Consensus 155 ~a~a~g~~~~~~~---~g---~~g--~~~~Sf~~~K~l~~g~GG~v~~~~~-------~~~~~~~~~~ 207 (379)
T PRK11658 155 AAHAVGTYYKGRH---IG---ARG--TAIFSFHAIKNITCAEGGLVVTDDD-------ELADRLRSLK 207 (379)
T ss_pred CCCccCCeECCee---cC---CCC--CEEEeCCCCCcCcccCceEEEECCH-------HHHHHHHHHH
Confidence 99985 3333321 11 112 2456666655567778898887553 4777776544
No 185
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=1.1e-18 Score=161.38 Aligned_cols=153 Identities=17% Similarity=0.165 Sum_probs=125.0
Q ss_pred cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEe
Q 020968 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFD 162 (319)
Q Consensus 87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~ 162 (319)
+....|++.++++. ..+..+++++++.|+.+++.+++++||+|+++.+.|.+.... +...|+++.+++
T Consensus 61 Ptv~~lE~~la~le--------g~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd 132 (432)
T PRK06702 61 PTLAAFEQKLAELE--------GGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN 132 (432)
T ss_pred cHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEEC
Confidence 35678999999988 345688999999999999999999999999999999765554 678899988886
Q ss_pred ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 242 (319)
. .+|++.+++++++++++|++.+|+||++.+.+ +++|+++|+++|+++|+|++|.. +.+...-
T Consensus 133 ~------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~t--------P~~~~pl 195 (432)
T PRK06702 133 P------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLAT--------PYLCQAF 195 (432)
T ss_pred C------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCc--------hhhCChh
Confidence 4 36899999999999999999999999999966 99999999999999999999853 1111111
Q ss_pred CCCCeEEEecCcc-----ccCCCccee
Q 020968 243 SIVPVLTLGSISK-----RWIVPGWRL 264 (319)
Q Consensus 243 ~~~~vi~~~s~sK-----~~~~~G~r~ 264 (319)
...-.|++.|+|| ...++|.++
T Consensus 196 ~~GADIvv~S~TKy~~Ghsd~l~G~v~ 222 (432)
T PRK06702 196 EHGANIIVHSTTKYIDGHASSLGGIVI 222 (432)
T ss_pred hcCCCEEEEccccccCCCcceeceEEE
Confidence 1223499999999 666666666
No 186
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.82 E-value=2.1e-18 Score=159.31 Aligned_cols=193 Identities=16% Similarity=0.111 Sum_probs=144.0
Q ss_pred CCcHHHHHHHHHHhhcCCC-----CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-----
Q 020968 62 RTASVAVDAIVHSVRSARF-----NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA----- 131 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~-----~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~----- 131 (319)
++++.+.+++.+.+..... +.|+ ..+...++++++++... .|. .++++|++|+|++++++.+++++.
T Consensus 10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~ 86 (382)
T TIGR03403 10 MLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEIL 86 (382)
T ss_pred CCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhcc
Confidence 5678899999887754221 1233 23557888888888753 232 257899999999999999998762
Q ss_pred CC-CCEEEEcCCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHH
Q 020968 132 RP-GANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQK 207 (319)
Q Consensus 132 ~~-gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~ 207 (319)
++ +++|+++...|+.+.. .++..|.+++.++.++ ++.+|++.+++.++++++++++++|+||||.+++ +++
T Consensus 87 ~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~ 161 (382)
T TIGR03403 87 KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANNETGMIFP---IKE 161 (382)
T ss_pred cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HHH
Confidence 45 4789999877766543 3457899999998753 3578999999999888899999999999999987 678
Q ss_pred HHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 208 IAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 208 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
|.++|+++|+++++|+++.. +..+..+.... -.+++.|++|+++.+| +|++.+.+
T Consensus 162 I~~la~~~g~~~ivD~a~~~----g~~~~~~~~~~---~D~~~~s~~K~~gp~G--~g~l~vr~ 216 (382)
T TIGR03403 162 IGEICKERGVLFHTDAVQAI----GKIPVDVQKAG---VDFLSFSAHKFHGPKG--VGGLYIRK 216 (382)
T ss_pred HHHHHHHcCCEEEEechhhc----CCCccCccccC---CCEEEEcchhhCCCCc--eEEEEECC
Confidence 88999999999999999774 22222222222 2388899999987778 57776643
No 187
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.82 E-value=4.7e-18 Score=158.15 Aligned_cols=232 Identities=17% Similarity=0.129 Sum_probs=156.3
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC------CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~ 117 (319)
+..+++|+.++. ..+...|.+++++.++++..... .+.......+|++.+++++ ..+..++++
T Consensus 44 ~~~~~~~~sn~y---lgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~--------g~~~~~~~~ 112 (406)
T PRK13393 44 PREVTVWCSNDY---LGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLH--------GKEAALLFT 112 (406)
T ss_pred CccEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHh--------CCCcEEEeC
Confidence 357889998873 44667899999999988753221 1111223467777777776 224555555
Q ss_pred CHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcC
Q 020968 118 GCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIIN 191 (319)
Q Consensus 118 G~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~ 191 (319)
++++++..++..+.. +|+.|++....|......+...|.++..++. .|++.+++.++ +++++|++++
T Consensus 113 SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~ 185 (406)
T PRK13393 113 SGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFES 185 (406)
T ss_pred CcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcC
Confidence 566788888887655 6787777778887777777778877666553 36777776654 2567888999
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC-CCCeEEEecCccccCCCcceeeEEEee
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
++|++|.+.+ +++|.++|+++++++|+||+|....++............ ....|+++||||.|+++| ||++++
T Consensus 186 v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~ 259 (406)
T PRK13393 186 VYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS 259 (406)
T ss_pred CCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC
Confidence 9999999966 889999999999999999999844433221111111111 123588899999999888 998864
Q ss_pred CCCCCccchHHHHHHHHhhhh---cCCcchHHHHHHHHHH
Q 020968 271 DPNGILQDSGIVDSIKSFLNI---SSDPATFIQFLKSSRK 307 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~q~~~~~~l 307 (319)
. ++++.++..... +...++..+.++..++
T Consensus 260 ~--------~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL 291 (406)
T PRK13393 260 A--------ALCDFIRSFASGFIFTTSLPPAVAAGALASV 291 (406)
T ss_pred H--------HHHHHHHHhCcCceecCccCHHHHHHHHHHH
Confidence 3 467777655432 2334555555544433
No 188
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=1.2e-18 Score=162.29 Aligned_cols=159 Identities=19% Similarity=0.182 Sum_probs=130.9
Q ss_pred cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEe
Q 020968 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD 162 (319)
Q Consensus 87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~ 162 (319)
+....|++.++++. ..+..++++|+++|+..++.+++++||+|+++.+.|... ...++..|++++.++
T Consensus 64 p~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd 135 (431)
T PRK08248 64 PTTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVD 135 (431)
T ss_pred chHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEEC
Confidence 34678888888887 346889999999999999999999999999999988653 345667899998887
Q ss_pred ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 242 (319)
. .|++.+++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.. +....++
T Consensus 136 ~-------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~~~pl---- 197 (431)
T PRK08248 136 P-------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYLLRPI---- 197 (431)
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cccCChh----
Confidence 5 3889999999888999999999999999976 78999999999999999999863 1111122
Q ss_pred CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
..+..+++.|++|.++.+|.++|++++.+
T Consensus 198 ~~gaDivv~S~tK~lgg~g~~~Gg~v~~~ 226 (431)
T PRK08248 198 EHGADIVVHSATKFIGGHGTSIGGVIVDS 226 (431)
T ss_pred HcCCCEEEEcCccccCCCCCceEEEEEeC
Confidence 12345999999999999999999988754
No 189
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.82 E-value=2e-18 Score=159.17 Aligned_cols=188 Identities=18% Similarity=0.196 Sum_probs=140.5
Q ss_pred CCcHHHHHHHHHHhhcCCCCCCCCC---------cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-
Q 020968 62 RTASVAVDAIVHSVRSARFNCYSST---------VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA- 131 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~---------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~- 131 (319)
++++.+.+++.+.+.... .++.. ...+++|+.+++++ +.++++|++|+|++++++.++.++.
T Consensus 10 ~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~t~a~~~al~~~~~ 81 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYF--GNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGGTESDNTAIKSALA 81 (379)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 677899999988775421 22211 12346666777766 3467899999999999999998764
Q ss_pred --CCCCEEEEcCCCCcchHH---HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHH
Q 020968 132 --RPGANILLPRPGFPYYEA---RATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ 206 (319)
Q Consensus 132 --~~gd~Vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~ 206 (319)
.+|++|++....|+.+.. .++..|.+++.++.+. ++.+|++++++.++++++++++++++||||.+++ ++
T Consensus 82 ~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~ 156 (379)
T TIGR03402 82 AQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFP---IE 156 (379)
T ss_pred hcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HH
Confidence 457899999988876543 3345699999888753 3568999999999888999999999999999987 67
Q ss_pred HHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 207 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+|.++|+++|+++++|++++. +..+..+.... -.+++.|.+|.++.+| +|++.+..
T Consensus 157 ~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~---~D~~~~s~~K~~gp~G--~g~l~v~~ 212 (379)
T TIGR03402 157 EIGEIAKERGALFHTDAVQAV----GKIPIDLKEMN---IDMLSLSGHKLHGPKG--VGALYIRK 212 (379)
T ss_pred HHHHHHHHcCCEEEEECcccc----cccccCcccCC---CCEEEEcHHHcCCCCc--eEEEEECC
Confidence 899999999999999999975 33333333322 2388889999766566 77776654
No 190
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.82 E-value=2.4e-18 Score=157.21 Aligned_cols=191 Identities=18% Similarity=0.165 Sum_probs=141.8
Q ss_pred CCcHHHHHHHHHHhhcCCC--CCCCCC------cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC-
Q 020968 62 RTASVAVDAIVHSVRSARF--NCYSST------VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR- 132 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~--~~Y~~~------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~- 132 (319)
++++.+.+++.+.+..... ..+... .-++++|+.+++++ +.++++|++++|++++++.++.++..
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~~ 82 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLARA 82 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 6788999999887743211 111111 11457788888877 45678999999999999999988753
Q ss_pred ---CC-CEEEEcCCCCcchH---HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHH
Q 020968 133 ---PG-ANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (319)
Q Consensus 133 ---~g-d~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l 205 (319)
+| +.|++....|+.+. ..++..|++++.++.+. ++.+|++++++.++++++++++++++||||.+++ +
T Consensus 83 ~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~ 157 (353)
T TIGR03235 83 GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---I 157 (353)
T ss_pred cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---H
Confidence 55 77888877776543 33456799999888753 4578999999999888899999999999999976 7
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (319)
Q Consensus 206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~ 272 (319)
++|.++|+++|+++++|++++... .+..+... .-.+++.|.+|+++.+| +|++++.++
T Consensus 158 ~~I~~l~~~~~~~~ivD~a~~~g~----~~~~~~~~---~~D~~~~s~~K~~gp~g--~g~l~~~~~ 215 (353)
T TIGR03235 158 REIAEVLEAHEAFFHVDAAQVVGK----ITVDLSAD---RIDLISCSGHKIYGPKG--IGALVIRKR 215 (353)
T ss_pred HHHHHHHHHcCCEEEEEchhhcCC----cccccccc---CCCEEEeehhhcCCCCc--eEEEEEccC
Confidence 999999999999999999987522 22222222 22378889999876556 899887653
No 191
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.81 E-value=2e-19 Score=163.73 Aligned_cols=199 Identities=15% Similarity=0.118 Sum_probs=152.5
Q ss_pred CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC----------
Q 020968 63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR---------- 132 (319)
Q Consensus 63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~---------- 132 (319)
++..+.+.+........ ..|+...+..++++++++++.+.+|.+.+..++++|+|+|+++..++.++..
T Consensus 11 ~~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~ 89 (345)
T cd06450 11 PPALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGG 89 (345)
T ss_pred HHHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccc
Confidence 44566666666555443 3588888999999999999998888664566899999999999999988742
Q ss_pred --C--CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccccCH
Q 020968 133 --P--GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 133 --~--gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~ 202 (319)
+ ++.|+++.+.|..+...+...|.+++.++.++. +.+|++++++.+.+ +++++++++|+||||.+
T Consensus 90 ~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~--- 164 (345)
T cd06450 90 GRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI--- 164 (345)
T ss_pred ccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC---
Confidence 2 347888999999998888888999999988643 47999999999876 67888899999999998
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~ 269 (319)
.++++|+++|+++|+++++|++|+.+.......... ......-..+..|++|++ .++.++|++++
T Consensus 165 ~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~l-~~p~g~g~~~~ 229 (345)
T cd06450 165 DPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHL-DFGIERVDSISVDPHKYG-LVPLGCSAVLV 229 (345)
T ss_pred CCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHH-hcCccccCEEEEchhHhh-CCCcchHHHHH
Confidence 558999999999999999999999866422111110 001011235677999974 56678888765
No 192
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.81 E-value=5.8e-18 Score=155.19 Aligned_cols=157 Identities=15% Similarity=0.214 Sum_probs=126.3
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~ 163 (319)
....|++.++++. ..+++++++|+++|+..++.+++++||+|++++|.|.+.... +...|+++..++.
T Consensus 51 t~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~ 122 (377)
T TIGR01324 51 THFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP 122 (377)
T ss_pred cHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 3469999999988 356899999999999999999999999999999999876543 3567887776643
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 243 (319)
. +.+.+++++++++++|++.+|+||+|.+ .++++|+++|+++|+++|+|++|+.-... .++ .
T Consensus 123 ~-------~~e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~~----~pl----~ 184 (377)
T TIGR01324 123 L-------IGEDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLLF----KPL----E 184 (377)
T ss_pred C-------CHHHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc----Ccc----c
Confidence 1 2378898898899999999999999988 77999999999999999999999863321 111 1
Q ss_pred CCCeEEEecCccccCCC-cceeeEEEee
Q 020968 244 IVPVLTLGSISKRWIVP-GWRLGWLVTS 270 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~-G~r~G~i~~~ 270 (319)
.+..+++.|++|.++.+ +...|++++.
T Consensus 185 ~gaDivv~S~tK~l~G~~d~~gG~v~~~ 212 (377)
T TIGR01324 185 HGVDISIQAGTKYLVGHSDIMIGTVVAN 212 (377)
T ss_pred cCceEEEecCceeccCCCCceEEEEEeC
Confidence 23349999999998765 4678877763
No 193
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.81 E-value=1.7e-18 Score=146.98 Aligned_cols=278 Identities=18% Similarity=0.161 Sum_probs=192.9
Q ss_pred HhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCC-cHHHHHHHHHHhhcC--CCCCCCCCcCCHHHHHHHH
Q 020968 21 KTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRT-ASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIA 97 (319)
Q Consensus 21 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~-~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia 97 (319)
...++.++..+...+. +..++.-+||+.|.......-|. .|.+.+ ....+..+ ..+.|-|-.|++.++.+.+
T Consensus 10 ~~a~p~~vf~~~~~y~----~d~~p~KvnL~igAYRtd~g~PWvLPvVk~-~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~ 84 (410)
T KOG1412|consen 10 PVAPPIEVFKLNASYG----EDLDPVKVNLGIGAYRTDDGKPWVLPVVKK-AEKKIANDQSLNHEYLPILGLPTFTKAAT 84 (410)
T ss_pred ccCChHHHHhhHHHhc----ccCCcceeecccceEEcCCCCeeEehhhhh-hhhhccCchhccchhccccCchhhhhhhH
Confidence 3344445555554443 44477889999996432222222 233333 33223332 2357989999999999999
Q ss_pred HHHhhhCCCCCCCCcE--EEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCC-CeEEEEeccCCCCCcCC
Q 020968 98 DYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSH-LEVRHFDLLPAKGWEVD 172 (319)
Q Consensus 98 ~~~~~~~g~~~~~~~i--~~~~G~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~d 172 (319)
+.+-......+..+++ +=+-++|.|+...+..+.. ...+|.+.+|+|.++..++...| ..+..++.++.++-.+|
T Consensus 85 el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d 164 (410)
T KOG1412|consen 85 ELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVD 164 (410)
T ss_pred HHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceec
Confidence 9986544445556665 4456788888888776632 35679999999999999999999 45667777777777899
Q ss_pred HHHHHhhhccCc--eEEEEcCC-CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC--CCccc-CCCCC
Q 020968 173 LDAVEALADENT--VALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV--PMGVF-GSIVP 246 (319)
Q Consensus 173 ~~~l~~~l~~~~--~~v~l~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~-~~~~~ 246 (319)
.+.+...++..+ ..+++..+ +||||.-.+.++|..|++..++++.+.+.|-+|++|..++.... .+..+ .....
T Consensus 165 ~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e 244 (410)
T KOG1412|consen 165 LEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFE 244 (410)
T ss_pred HHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCe
Confidence 999888776533 44555555 99999999999999999999999999999999999987653321 12222 22345
Q ss_pred eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-----hhcCCcchHHHHHHHHHHhc
Q 020968 247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-----NISSDPATFIQFLKSSRKLK 309 (319)
Q Consensus 247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~q~~~~~~l~~ 309 (319)
++++.||+|.||+.+.|+|-+...-++ +..+..++... ..++.|+......+++ +++
T Consensus 245 ~fv~QSFaKNfGlYneRvGnltvv~~n-----~a~i~~v~SQl~lviR~~~SNPPAyGArIV~k-vL~ 306 (410)
T KOG1412|consen 245 LFVCQSFAKNFGLYNERVGNLTVVVNN-----PAVIAGVKSQLTLVIRSNWSNPPAYGARIVHK-VLS 306 (410)
T ss_pred EEEEhhhhhhcccccccccceEEEecC-----hhHHHHHHHHHHHHHhhccCCCcchhhHHHHH-Hhc
Confidence 899999999999999999987443222 23444444332 2356777777788888 444
No 194
>PLN02651 cysteine desulfurase
Probab=99.81 E-value=6.3e-18 Score=155.08 Aligned_cols=198 Identities=16% Similarity=0.149 Sum_probs=144.9
Q ss_pred eccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCC------CC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY------SS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 49 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y------~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
.|+.+.+. ++++.+.+++.+.+.....+.. .. ..-.+++|+.+++++ +.+++++++|+|++
T Consensus 2 Yld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~t 70 (364)
T PLN02651 2 YLDMQATT-----PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGAT 70 (364)
T ss_pred cccCcCCC-----CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHH
Confidence 45666654 6788999999887653211111 01 111456667777766 34678999999999
Q ss_pred HHHHHHHHHh----cCCCCEEEEcCCCCcchHHH---HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCC
Q 020968 121 QAIEVILTVL----ARPGANILLPRPGFPYYEAR---ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPG 193 (319)
Q Consensus 121 ~ai~~~~~~l----~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~ 193 (319)
++++.++.++ .++||+|++....|+.+... +...|.+++.++.+ .++.+|++.++++++++++++++++++
T Consensus 71 ~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~~ 148 (364)
T PLN02651 71 ESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAVN 148 (364)
T ss_pred HHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECCC
Confidence 9988887664 46899999999888765433 33568888888875 345789999999999889999999999
Q ss_pred CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
|+||.+.+ +++|.++|+++|+++++|.+++. +..+..+..++- .+++.|.+|++ .| ..+|++++.+
T Consensus 149 n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~----g~~~~~~~~~~~---D~~~~s~hK~~-gp-~G~g~l~v~~ 214 (364)
T PLN02651 149 NEIGVIQP---VEEIGELCREKKVLFHTDAAQAV----GKIPVDVDDLGV---DLMSISGHKIY-GP-KGVGALYVRR 214 (364)
T ss_pred CCceeccc---HHHHHHHHHHcCCEEEEEcchhh----CCcccCcccCCC---CEEEechhhhC-CC-CceEEEEEcC
Confidence 99999966 88999999999999999999986 322333333332 48999999974 33 3488887765
No 195
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.81 E-value=2.8e-18 Score=139.61 Aligned_cols=166 Identities=19% Similarity=0.121 Sum_probs=130.9
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH-HHHhhCCCeEEEEeccCCC
Q 020968 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE-ARATHSHLEVRHFDLLPAK 167 (319)
Q Consensus 89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~ 167 (319)
+.++++.++++++ .+.+++++++|+++|+..+++++.+++++|+++.+.|.+.. ..++..|.++..++.+...
T Consensus 2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 75 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAG 75 (170)
T ss_pred HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCC
Confidence 3678899998883 46789999999999999999999888999999999998887 7889999999998876543
Q ss_pred CCcCCHHHHHhhh-ccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968 168 GWEVDLDAVEALA-DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (319)
Q Consensus 168 ~~~~d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~ 246 (319)
....+.+.+++.. .++++++++++++|++|...+ +++|.++|+++|+++|+|++|..+...... ........
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~----~~~~~~~~ 148 (170)
T cd01494 76 YGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG----VLIPEGGA 148 (170)
T ss_pred ccchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc----cccccccC
Confidence 3333333554433 457889999999999999876 488889999999999999999987754321 11112234
Q ss_pred eEEEecCccccCCCcceeeEEEe
Q 020968 247 VLTLGSISKRWIVPGWRLGWLVT 269 (319)
Q Consensus 247 vi~~~s~sK~~~~~G~r~G~i~~ 269 (319)
.+++.|++|.++. .++|++++
T Consensus 149 d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 149 DVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred CEEEEEcccccCC--CceEEEEe
Confidence 5888999999766 67999875
No 196
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.81 E-value=4.8e-18 Score=156.10 Aligned_cols=175 Identities=21% Similarity=0.224 Sum_probs=132.4
Q ss_pred CCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCC
Q 020968 82 CYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSH 155 (319)
Q Consensus 82 ~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g 155 (319)
.|... +...+|++.+++++ ..++++++++++.+++.++. ++++||+|+++.+.|..+.. .+...|
T Consensus 40 ~Y~r~~~p~~~~le~~la~l~--------g~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 110 (378)
T TIGR01329 40 DYTRSGNPTRTALESLLAKLD--------KADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSG 110 (378)
T ss_pred ccCCCCChHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcC
Confidence 45543 22456777777766 23567777778889998776 77999999999999987654 345689
Q ss_pred CeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC
Q 020968 156 LEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF 235 (319)
Q Consensus 156 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~ 235 (319)
+++..++. .|++++++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|.... ..
T Consensus 111 ~~v~~vd~-------~d~~~le~~i~~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~----~~ 176 (378)
T TIGR01329 111 VVVVHVDT-------TDLDKVKAALGPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPL----LC 176 (378)
T ss_pred cEEEEeCC-------CCHHHHHHhcCcCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccc----cC
Confidence 99988875 2889999999888999999999999999965 9999999999999999999986422 11
Q ss_pred CCCcccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968 236 VPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 236 ~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 290 (319)
.++. .. -.+++.|++|.++.+ |.+.|++++.++ .+.++++..+.
T Consensus 177 ~~l~-~g---~Di~v~S~tK~l~G~~~~~~G~v~~~~~-------~~~~~~~~~~~ 221 (378)
T TIGR01329 177 NPLE-LG---ADIVYHSATKFLAGHSDVMAGVLAVKGE-------EIAKKVYFLQN 221 (378)
T ss_pred Chhh-cC---CcEEEEecceeccCCccceeEEEEeCcH-------HHHHHHHHHHH
Confidence 2221 22 239999999998764 578999987542 35566665554
No 197
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.80 E-value=8.3e-18 Score=154.76 Aligned_cols=192 Identities=20% Similarity=0.333 Sum_probs=140.8
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCC
Q 020968 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPG 143 (319)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~ 143 (319)
+.-.+++.+.+..+.. |+. .++++++++++.+.. +.+++++++|+++|+.+++.++ +++||+|+++.|+
T Consensus 11 ~~~~~~~~~~l~~~~~--~g~----~~~~~~~e~~la~~~----g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t 80 (375)
T PRK11706 11 GTELDYIQQAMSSGKL--CGD----GGFTRRCQQWLEQRF----GSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYT 80 (375)
T ss_pred HHHHHHHHHHHHcCCc--cCC----CHHHHHHHHHHHHHh----CCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCC
Confidence 4456677777665432 332 244555555554433 3468999999999999988766 6899999999999
Q ss_pred CcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeC
Q 020968 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223 (319)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (319)
|..+...+...|++++.+++++ +++.+|++++++++++++++|++++ ++|... ++++|.++|+++|++||+|+
T Consensus 81 ~~~~~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~---~~~~i~~la~~~~i~vIeD~ 153 (375)
T PRK11706 81 FVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPVH---YAGVAC---EMDTIMALAKKHNLFVVEDA 153 (375)
T ss_pred cHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEeC---CCCCcc---CHHHHHHHHHHcCCEEEEEC
Confidence 9999999999999999999864 4578999999999988888888764 689874 58899999999999999999
Q ss_pred CCCCcc-CCCCCCCCCcccCCCCCeEEEecCc--cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968 224 VYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL 289 (319)
Q Consensus 224 a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 289 (319)
+|+.+. +++.+ +..+. .+.+.||+ |.+ .+|.+.++++. + +++.++++..+
T Consensus 154 a~a~g~~~~~~~---~g~~~----~~~~~Sf~~~K~l-~~g~gG~~~~~-~-------~~~~~~~~~~~ 206 (375)
T PRK11706 154 AQGVMSTYKGRA---LGTIG----HIGCFSFHETKNY-TAGEGGALLIN-D-------PALIERAEIIR 206 (375)
T ss_pred ccccccccCCee---eecCc----CEEEEeCCCCccc-cccCCeEEEEC-C-------HHHHHHHHHHH
Confidence 999765 34322 22221 14445554 996 45877777764 2 24777666554
No 198
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=5.3e-18 Score=158.35 Aligned_cols=218 Identities=16% Similarity=0.095 Sum_probs=143.2
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-----CCCCC-CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-----FNCYS-STVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~-~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~ 117 (319)
..+.++|..++. ++++.+++++...+.... ...|. .......+.+...+.+.+.+| .+..+|++++
T Consensus 24 ~~~~~~l~~~~n------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~i~~~s 95 (416)
T PRK00011 24 QEEHIELIASEN------FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--AEYANVQPHS 95 (416)
T ss_pred HhcCeeeecccC------cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC--CCceeeecCC
Confidence 467899998872 468899998876542210 01111 111123333322223333334 3445566655
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH-----HHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcC
Q 020968 118 GCTQAIEVILTVLARPGANILLPRPGFPYYEA-----RATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIIN 191 (319)
Q Consensus 118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~ 191 (319)
+++|+..++.+++++||+|+++.|+|..+.. .....|++++.++++. +++.+|++++++++++ +++++++++
T Consensus 96 -gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~~ 173 (416)
T PRK00011 96 -GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAGA 173 (416)
T ss_pred -chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEECC
Confidence 4779999999999999999999999975421 1233456777776643 3468999999999864 688888876
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
++++ .. .++++|.++|+++|+++|+|++|.. +.+.+..+..+. ...++++|+||++ +|.|.||++++
T Consensus 174 ~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-----~~di~~~S~~K~l--~g~~gg~i~~~ 241 (416)
T PRK00011 174 SAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-----HADVVTTTTHKTL--RGPRGGLILTN 241 (416)
T ss_pred CcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-----CCcEEEecCCcCC--CCCCceEEEeC
Confidence 6554 33 3489999999999999999999753 332222222222 1237899999984 78999999986
Q ss_pred CCCCCccchHHHHHHHHhhh
Q 020968 271 DPNGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~ 290 (319)
++ ++.++++....
T Consensus 242 ~~-------~~~~~l~~~~~ 254 (416)
T PRK00011 242 DE-------ELAKKINSAVF 254 (416)
T ss_pred CH-------HHHHHHHHHhC
Confidence 53 47777776554
No 199
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.80 E-value=8.1e-18 Score=153.61 Aligned_cols=190 Identities=15% Similarity=0.142 Sum_probs=135.5
Q ss_pred CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 020968 61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP 140 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~ 140 (319)
..+++.+++++...... ....|. ....++|+.++++++. .-+...|++++|+++++..++.+++.+||++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~~~----~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~ 80 (355)
T TIGR03301 8 LSTSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALAGG----DDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVL 80 (355)
T ss_pred CCCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHhcC----CCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEE
Confidence 36678888888763221 111232 2356777777777732 2222368889999999999999998888887765
Q ss_pred CCC-Ccc-hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc--CceEEEEcCCCCccccccCHHHHHHHHHHHHHcC
Q 020968 141 RPG-FPY-YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216 (319)
Q Consensus 141 ~p~-~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~ 216 (319)
.+. |.. +...++..|.+++.++.+. ++.+|++++++.+++ +.+.+++++++||||.+.+ +++|+++|++++
T Consensus 81 ~~~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~ 155 (355)
T TIGR03301 81 INGAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSHG 155 (355)
T ss_pred CCCchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHcC
Confidence 554 443 4567788999999888743 457899999998864 4467788899999999955 899999999999
Q ss_pred CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc-CCCcceeeEEEeeC
Q 020968 217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSD 271 (319)
Q Consensus 217 ~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~-~~~G~r~G~i~~~~ 271 (319)
+++|+|++++.. . .+.++..+ +..++++|++|++ +.+| +||+++++
T Consensus 156 ~~livD~~~s~g---~-~~~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~~ 202 (355)
T TIGR03301 156 AVLIVDAMSSFG---A-IPIDIEEL---DVDALIASANKCLEGVPG--FGFVIARR 202 (355)
T ss_pred CEEEEEeccccC---C-cccchhhc---CccEEEecCCcccccCCc--eeEEEECH
Confidence 999999876542 1 12222222 3458899999985 4456 69999854
No 200
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.80 E-value=7.5e-18 Score=155.31 Aligned_cols=244 Identities=16% Similarity=0.143 Sum_probs=166.5
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|.-..+..+ .+|.+.+++.++++... ..+ .....+++..+++++.+..+ .+.+++++++++|
T Consensus 27 ~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a 98 (377)
T PRK02936 27 NGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIW--HVS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAEA 98 (377)
T ss_pred CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--ccc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHH
Confidence 4678899988874333334 67889999999887532 122 23457889999999976432 3589999999999
Q ss_pred HHHHHHHhc-CCC-CEEEEcCCCCcchH-HHHhhCCCeEE---EEeccCCCCC--cCCHHHHHhhhccCceEEEEcCCCC
Q 020968 123 IEVILTVLA-RPG-ANILLPRPGFPYYE-ARATHSHLEVR---HFDLLPAKGW--EVDLDAVEALADENTVALVIINPGN 194 (319)
Q Consensus 123 i~~~~~~l~-~~g-d~Vl~~~p~~~~~~-~~~~~~g~~~~---~~~~~~~~~~--~~d~~~l~~~l~~~~~~v~l~~p~n 194 (319)
+..+++... .+| ++|++.++.|++.. ......+.... ..+..+.-.+ ..|++.+++.+.++++++++..+++
T Consensus 99 ~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~ 178 (377)
T PRK02936 99 NEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQG 178 (377)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccC
Confidence 999998542 234 67999998887533 22222222110 0111100000 1278999998887888888888889
Q ss_pred ccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCC
Q 020968 195 PCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (319)
Q Consensus 195 ptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~ 273 (319)
++|.. .+.+.+++|.++|+++|+++|+||+|.++.+.+... ....+.....+ .++||.++ +|+|+||++++.
T Consensus 179 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~~-- 251 (377)
T PRK02936 179 EGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGKK-- 251 (377)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEcH--
Confidence 98876 578999999999999999999999999877665422 22222222222 37999987 899999999853
Q ss_pred CCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968 274 GILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 274 ~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
++++.+..... .+.+.+++.|.++..++
T Consensus 252 ------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l 280 (377)
T PRK02936 252 ------ELGTAFGPGSHGSTFGGNPLAMAAAKEVL 280 (377)
T ss_pred ------HHHhhccCCCCCCCCCCCHHHHHHHHHHH
Confidence 46666654322 23467889998887765
No 201
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.80 E-value=4.1e-18 Score=157.36 Aligned_cols=231 Identities=15% Similarity=0.160 Sum_probs=152.1
Q ss_pred EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC------CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR------FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
+||+..| |..+...|.+++++.+++++.. -..|+...++.+|++.+|+++.. .+.+++++|.++
T Consensus 1 ~~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~-------e~al~~~sG~~a 70 (392)
T PLN03227 1 LNFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT-------ESAILYSDGAST 70 (392)
T ss_pred CCCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC-------CcEEEecCcHHH
Confidence 3566666 3456778899999998886511 12377666789999999999932 355666666555
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc-----------cCceEEEEc
Q 020968 122 AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD-----------ENTVALVII 190 (319)
Q Consensus 122 ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~-----------~~~~~v~l~ 190 (319)
.. .++.+++++||.|+++++.|.++...+...+.++..++..+. -+++.+.+.+. +++++|++.
T Consensus 71 ~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E 145 (392)
T PLN03227 71 TS-STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVVE 145 (392)
T ss_pred HH-HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEEc
Confidence 55 677778999999999999999988777777777776664311 13333333332 246788888
Q ss_pred CCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc--cC-CCCCeEEEecCccccCCCcceeeEE
Q 020968 191 NPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV--FG-SIVPVLTLGSISKRWIVPGWRLGWL 267 (319)
Q Consensus 191 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~-~~~~vi~~~s~sK~~~~~G~r~G~i 267 (319)
.+.||+|.+.+ ++++.++|+++|+++|+||+|..-..+......... +. ..+..|++.|+||.++ .+.|++
T Consensus 146 ~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v 219 (392)
T PLN03227 146 GLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMT 219 (392)
T ss_pred CCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEE
Confidence 99999999977 889999999999999999999832222111111111 11 1233688999999975 444888
Q ss_pred EeeCCCCCccchHHHHHHHHhh-h-hcC-CcchHHHHHHHHHH
Q 020968 268 VTSDPNGILQDSGIVDSIKSFL-N-ISS-DPATFIQFLKSSRK 307 (319)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~q~~~~~~l 307 (319)
+++. ++++.++... . .++ ..+++.+.+...++
T Consensus 220 ~~~~--------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al 254 (392)
T PLN03227 220 VGSE--------EVVDHQRLSGSGYCFSASAPPFLAKADATAT 254 (392)
T ss_pred ecCH--------HHHHHHHHhCcCccccCCCCHHHHHHHHHHH
Confidence 7643 4565554332 2 222 22455555544333
No 202
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.80 E-value=6.3e-18 Score=155.28 Aligned_cols=190 Identities=18% Similarity=0.171 Sum_probs=137.7
Q ss_pred CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 020968 61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLP 140 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~ 140 (319)
.++.+.+.+++.+.... ....|. ....++|+.++++++. .-+.+.+++++|+++++..++.++..+||.|+++
T Consensus 14 ~~~~~~~~~a~~~~~~~-~~~~~~--~~~~~~~~~l~~l~~~----~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~ 86 (368)
T PRK13479 14 LTTSRTVREAMLRDWGS-WDDDFN--ALTASVRAKLVAIATG----EEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVP 86 (368)
T ss_pred CCCCHHHHHHhCCCCCC-CChHHH--HHHHHHHHHHHHHhCC----CCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence 35677887777654311 111122 2456777777777632 2123568899999999999999999999999998
Q ss_pred CCCCcch--HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc--CceEEEEcCCCCccccccCHHHHHHHHHHHHHcC
Q 020968 141 RPGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG 216 (319)
Q Consensus 141 ~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~ 216 (319)
.+.|.+. ...++..|+++..++... ++.+|++++++.+++ +.+++++++|+||||...+ +++|.++|++++
T Consensus 87 ~~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~ 161 (368)
T PRK13479 87 DNGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHG 161 (368)
T ss_pred eCCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcC
Confidence 8887654 477788999999998753 356899999998864 4567889999999999977 788899999999
Q ss_pred CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc-CCCcceeeEEEeeC
Q 020968 217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW-IVPGWRLGWLVTSD 271 (319)
Q Consensus 217 ~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~-~~~G~r~G~i~~~~ 271 (319)
+++|+|+++.. +. .+..+.... ..+++.|++|++ +.+| +||++++.
T Consensus 162 ~~livDa~~~~---g~-~~~~~~~~~---~d~~v~s~~K~l~g~~G--~G~l~~~~ 208 (368)
T PRK13479 162 KRLIVDAMSSF---GA-IPIDIAELG---IDALISSANKCIEGVPG--FGFVIARR 208 (368)
T ss_pred CEEEEEccccc---CC-ccccccccC---ceEEEecCccccccCCC--ceEEEECH
Confidence 99999966532 22 223333332 237778999975 5577 69999854
No 203
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=4.3e-18 Score=158.33 Aligned_cols=159 Identities=23% Similarity=0.227 Sum_probs=126.5
Q ss_pred cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhh----CCCeEEEEe
Q 020968 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH----SHLEVRHFD 162 (319)
Q Consensus 87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~ 162 (319)
+...+|++.++++.. .+..++++++++|+..++.+++++||+|+++.+.|......+.. .|+++..++
T Consensus 58 pt~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d 129 (425)
T PRK06084 58 PTNDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA 129 (425)
T ss_pred chHHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence 455788888988872 34677888889999999999999999999999999864444332 455555554
Q ss_pred ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 242 (319)
. .|++.+++++++++++|++++|+||+|.+++ +++|.++|+++|+++|+|++|+..... .++ ..
T Consensus 130 ~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~----~p~-~~- 193 (425)
T PRK06084 130 H-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC----RPF-EH- 193 (425)
T ss_pred C-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----Chh-hc-
Confidence 2 3899999999888999999999999999976 899999999999999999999853221 111 11
Q ss_pred CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
...+++.|++|.++.+|.++|.+++.+
T Consensus 194 --gaDivv~S~tK~l~G~g~~~gG~v~~~ 220 (425)
T PRK06084 194 --GADIVVHSLTKYIGGHGTSIGGIVVDS 220 (425)
T ss_pred --CCCEEEECchhcccccccceeEEEEeC
Confidence 234999999999999999999988753
No 204
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.79 E-value=1.4e-17 Score=153.09 Aligned_cols=197 Identities=20% Similarity=0.208 Sum_probs=141.3
Q ss_pred CCcHHHHHHHHHHhhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC----CCC
Q 020968 62 RTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR----PGA 135 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~----~gd 135 (319)
++.|.+.+++.+++.... ...| .+..++.+.+.+.+.+..| .+..++++++|+++++..++.++.+ +|+
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~ 105 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLF---PGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEKP 105 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccC---ccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCCc
Confidence 456788888888776421 1112 2333333344444444333 3456789999999999998877654 578
Q ss_pred EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc
Q 020968 136 NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL 215 (319)
Q Consensus 136 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~ 215 (319)
+|++..+.|..+...++..|.++..++.+ .++.+|+++++++++++++.|++++++|+||.+.+ +++|.++|+++
T Consensus 106 ~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~ 180 (371)
T PRK13520 106 NIVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALEN 180 (371)
T ss_pred eEEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHc
Confidence 99999999999988889999999988874 34578999999999888888888889999999966 88999999999
Q ss_pred CCEEEEeCCCCCccCC--CCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 216 GIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 216 ~~~li~D~a~~~~~~~--~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
|+++++|++|..+... ... ..+ .+....-..+..|.+|+ +.+|.++|++++.+
T Consensus 181 g~~livD~a~~~~~~~~~~~~-~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~ 235 (371)
T PRK13520 181 GIFLHVDAAFGGFVIPFLDDP-PNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRD 235 (371)
T ss_pred CCCEEEEecchhHHHHhhcCC-CCc-cccCCCCceEEECCccc-cCccCCceEEEEcC
Confidence 9999999999875421 111 011 11111112455678896 77888999988754
No 205
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.79 E-value=1e-17 Score=155.63 Aligned_cols=236 Identities=17% Similarity=0.154 Sum_probs=152.2
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
++..++||..|.-..+..+ -.|.+.+++.+++.... .++..... +....+++.+.+.. ..+.+++++++++|
T Consensus 38 dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~--~~~~~~~~-~~~~~l~~~l~~~~----~~~~~~~~~sGseA 109 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLW--HISNVFTN-EPALRLAKKLIDAT----FAERVFFANSGAEA 109 (403)
T ss_pred CCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcC--cccCccCC-HHHHHHHHHHHhhC----CCCEEEEeCchHHH
Confidence 3667889977732222223 67889999998876522 11111111 22334444444322 24689999999999
Q ss_pred HHHHHHHhc--------CCCCEEEEcCCCCcchHHHH-hhCCC------------eEEEEeccCCCCCcCCHHHHHhhhc
Q 020968 123 IEVILTVLA--------RPGANILLPRPGFPYYEARA-THSHL------------EVRHFDLLPAKGWEVDLDAVEALAD 181 (319)
Q Consensus 123 i~~~~~~l~--------~~gd~Vl~~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~~~~~~d~~~l~~~l~ 181 (319)
+..+++... ....+|+..+-.|++....+ ...+. ++..++. .|++.+++.+.
T Consensus 110 ~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 182 (403)
T PRK05093 110 NEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVID 182 (403)
T ss_pred HHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHhc
Confidence 999988542 12357887787776643222 21111 1111111 27899999887
Q ss_pred cCceEEEEcCCCCcccccc--CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCC
Q 020968 182 ENTVALVIINPGNPCGNVY--TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV 259 (319)
Q Consensus 182 ~~~~~v~l~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~ 259 (319)
+++++|++. |.||+|-++ +.+.+++|.++|++||+++|+||+|.++.+++... +...+..... +.||||+++
T Consensus 183 ~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~s~sK~l~- 256 (403)
T PRK05093 183 DHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYMHYGVTPD---ILTSAKALG- 256 (403)
T ss_pred CCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCCCC---EEEeccccc-
Confidence 777777666 877777654 88999999999999999999999999987766432 2212221111 458999987
Q ss_pred CcceeeEEEeeCCCCCccchHHHHHHHHh-hhhcCCcchHHHHHHHHHH
Q 020968 260 PGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 260 ~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l 307 (319)
+|+|+||+++++ ++++.+... .....+.+++.|.++..++
T Consensus 257 ~G~rig~vv~~~--------~i~~~l~~~~~~~t~~~~~~~~~aa~a~L 297 (403)
T PRK05093 257 GGFPIGAMLTTA--------EIASHFKVGTHGSTYGGNPLACAVAEAVF 297 (403)
T ss_pred CCcceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHH
Confidence 899999999864 466666542 2334467888998877744
No 206
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.79 E-value=9.1e-18 Score=153.26 Aligned_cols=189 Identities=19% Similarity=0.170 Sum_probs=134.7
Q ss_pred CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEE
Q 020968 81 NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRH 160 (319)
Q Consensus 81 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~ 160 (319)
.+|+ .+...+|+++++++. ..+++++++|+++|+.+++. ++++||+|+++.+.|......+....... .
T Consensus 49 ~R~~-~p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~ 117 (364)
T PRK07269 49 TRTK-NPTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG-R 117 (364)
T ss_pred eCCC-CccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-c
Confidence 3444 346789999999998 46799999999999999985 56899999999999976544333211100 0
Q ss_pred EeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240 (319)
Q Consensus 161 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 240 (319)
+.. .|..|++++++++++++++|++++|+||+|.+. ++++|+++|+++|+++|+|++|..-.+. .++..
T Consensus 118 ~~~----~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~----~pl~~ 186 (364)
T PRK07269 118 FHF----TYANTEEELIAAIEEDTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ----RPIEL 186 (364)
T ss_pred EEE----EecCCHHHHHHhcCcCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC----Cchhh
Confidence 111 123589999999988999999999999999985 5999999999999999999998653221 12221
Q ss_pred cCCCCCeEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHH
Q 020968 241 FGSIVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFL 302 (319)
Q Consensus 241 ~~~~~~vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~ 302 (319)
.-.+++.|++|.++.+|- -.|++++.++ ++.++++..+.. ....+++..+.
T Consensus 187 ----gaDivv~S~tK~l~g~~d~~gG~v~~~~~-------~l~~~~~~~~~~~G~~~s~~~a~l 239 (364)
T PRK07269 187 ----GADIVLHSATKYLSGHNDVLAGVVVTNDL-------ELYEKLFYNLNTTGAVLSPFDSYL 239 (364)
T ss_pred ----CCcEEEecCceeccCCCcccceEEEeCcH-------HHHHHHHHHHHHhCCCCCHHHHHH
Confidence 223999999999877554 4577776543 477777655543 33445444443
No 207
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=1.2e-17 Score=153.42 Aligned_cols=171 Identities=20% Similarity=0.241 Sum_probs=127.3
Q ss_pred cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc-hH---HHHhhCCCeEEEEe
Q 020968 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY-YE---ARATHSHLEVRHFD 162 (319)
Q Consensus 87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~-~~---~~~~~~g~~~~~~~ 162 (319)
+...+|++.++++.. .+..+++++++.++..++ .++++||+|+++.|.|.+ +. ..+...|++++.++
T Consensus 50 p~~~~Le~~lA~l~g--------~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 120 (377)
T PRK07671 50 PTRAALEELIAVLEG--------GHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVD 120 (377)
T ss_pred hHHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEEC
Confidence 356788999998873 233455555677887765 577899999999999984 33 23455788888776
Q ss_pred ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 242 (319)
. .|++++++++++++++|++++|+||+|.+. ++++|.++|+++|+++|+|++|....+.. ++ .+
T Consensus 121 ~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~~---dl~~I~~la~~~g~~lvvD~a~~~~~~~~----p~-~~- 184 (377)
T PRK07671 121 T-------SNLEEVEEAIRPNTKAIYVETPTNPLLKIT---DIKKISTIAKEKGLLTIVDNTFMTPYWQS----PI-SL- 184 (377)
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCccc---CHHHHHHHHHHcCCEEEEECCCCccccCC----hh-hh-
Confidence 4 388999999988999999999999999985 58899999999999999999997643321 11 11
Q ss_pred CCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968 243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 243 ~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 291 (319)
...+++.|+||.++.++ .-.|++++.++ ++.++++..+..
T Consensus 185 --g~Divv~S~sK~l~G~~~~~~G~~v~~~~-------~l~~~~~~~~~~ 225 (377)
T PRK07671 185 --GADIVLHSATKYLGGHSDVVAGLVVVNSP-------ELAEDLHFVQNS 225 (377)
T ss_pred --CCeEEEecCcccccCCccceeEEEEeCcH-------HHHHHHHHHHHh
Confidence 22499999999998765 35566766442 477777766654
No 208
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.79 E-value=7.7e-18 Score=158.62 Aligned_cols=201 Identities=24% Similarity=0.257 Sum_probs=143.7
Q ss_pred CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC--cCCHHHHHHHHHHH---hhhCCCCCCCCcEEEeCCHH
Q 020968 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST--VGILPARRAIADYL---NRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~---~~~~g~~~~~~~i~~~~G~t 120 (319)
.+++|+.|.++ +..+..+.++.... .....|.+. .....++++++++. .+.+|. +.+++.+++|++
T Consensus 69 ~~~~lg~g~~~----~~~p~~~~~~~~~~---~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~--~~~~v~~~~g~t 139 (447)
T PRK00451 69 YPSFLGAGAYD----HYIPAVVDHIISRS---EFYTAYTPYQPEISQGTLQAIFEYQTMICELTGM--DVANASMYDGAT 139 (447)
T ss_pred CcccCcccccC----CcCcHHHHHHHhch---hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCC--CcceEEecCcHH
Confidence 67889999876 45666665554332 112235441 11344565655433 555553 556899999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEcCCCCcchHHHHhh----CCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc
Q 020968 121 QAIEVILTVLA-RPGANILLPRPGFPYYEARATH----SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (319)
Q Consensus 121 ~ai~~~~~~l~-~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 195 (319)
+++..++.++. .+||+|+++.+.|+.+...++. .|.+++.++.++ + .+|++++++++++++++|++++| ||
T Consensus 140 ~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~ 215 (447)
T PRK00451 140 ALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NF 215 (447)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CC
Confidence 99999988874 7899999999999888776654 689999998754 3 68999999999888999999999 89
Q ss_pred cccccCHHHHHHHHHHHHHcCCEEEE--eCCCCCccCCCCCCCCCcccCCCCCeEEEe---cCccccCCCcceeeEEEee
Q 020968 196 CGNVYTYQHLQKIAETAKKLGIMVIA--DEVYDHLAFGNTPFVPMGVFGSIVPVLTLG---SISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~--D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~---s~sK~~~~~G~r~G~i~~~ 270 (319)
||.+. ++++|.++|+++|+++++ |....... . .. ...+..+++. ++||.+.+.|+|+||++++
T Consensus 216 tG~v~---~l~~I~~~a~~~~~~~iv~~d~~~~g~~-----~-~~---~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~ 283 (447)
T PRK00451 216 FGVIE---DLEEIAEIAHAGGALFIVGVDPVSLGLL-----K-PP---GEYGADIVVGEGQPLGIPLSFGGPYLGFFATR 283 (447)
T ss_pred CCeeC---CHHHHHHHHHHCCCEEEEEcChHHhccC-----C-Cc---ccCCCCEEEECCCcCCCCCCCCCCCchHHHhh
Confidence 99994 499999999999999988 43321111 0 11 1112235555 6788888889999999875
Q ss_pred C
Q 020968 271 D 271 (319)
Q Consensus 271 ~ 271 (319)
.
T Consensus 284 ~ 284 (447)
T PRK00451 284 K 284 (447)
T ss_pred H
Confidence 3
No 209
>PRK05968 hypothetical protein; Provisional
Probab=99.79 E-value=2.5e-17 Score=151.95 Aligned_cols=180 Identities=20% Similarity=0.206 Sum_probs=133.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~~ 163 (319)
...+|++.++++++ .+..+++++++.|+..++.+++++||+|+++.+.|... ...+...|+++..++.
T Consensus 64 ~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 64 TVRAFEEMLAKLEG--------AEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 46799999999883 23456667778899999999999999999999999763 3456678999888764
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 243 (319)
.|++++++++ +++++|++++|+||++.+ .++++|.++|+++|+++|+|++|....+.. ++. ..
T Consensus 136 -------~d~~~l~~~i-~~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~----p~~-~g- 198 (389)
T PRK05968 136 -------RDEEAVAKAL-PGAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQR----PIT-LG- 198 (389)
T ss_pred -------CCHHHHHHhc-ccCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccC----chh-cC-
Confidence 2888999887 568899999877777666 889999999999999999999998754322 111 11
Q ss_pred CCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhh--hcCCcchHHHHH
Q 020968 244 IVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQFL 302 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~ 302 (319)
..+++.|+||.++.+| .+.|+++++. +++++++.... .....+++.+..
T Consensus 199 --~Divv~S~tK~l~g~~~~~gG~i~~~~--------~~~~~l~~~~~~~~g~~~~~~~A~~ 250 (389)
T PRK05968 199 --VDLVIHSASKYLGGHSDTVAGVVAGSK--------EHIARINAEAYPYLGAKLSPFEAWL 250 (389)
T ss_pred --CcEEEeeccccccCCCCeEEEEEEECH--------HHHHHHHHHHHHhCCCCCChHHHHH
Confidence 2388899999998865 5788887532 46777665433 223345544444
No 210
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.79 E-value=8.1e-18 Score=157.36 Aligned_cols=241 Identities=14% Similarity=0.063 Sum_probs=160.6
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|.....- -..+|.+.+++.+++..... .+.+..+..+|++++++++.. .+++++++|+++|
T Consensus 46 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~-~~~~~~~~~~lae~l~~~~~~-------~~~v~~~~sGseA 116 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLIL-GHAHPRVVEAVKEALERGTS-YGAPTEAEILLAKEIISRVPS-------VEMVRFVNSGTEA 116 (423)
T ss_pred CCCEEEEcccccccccc-CCCCHHHHHHHHHHHHhCCc-CCCCCHHHHHHHHHHHHhCCc-------ccEEEEeCCHHHH
Confidence 47788999888644211 14578999999998876542 222455678999999988722 3689999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhh---CCCeEEEEeccCC-------CCC---cCCHHHHHhhhc---cCc
Q 020968 123 IEVILTVLA--RPGANILLPRPGFPYYEARATH---SHLEVRHFDLLPA-------KGW---EVDLDAVEALAD---ENT 184 (319)
Q Consensus 123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~-------~~~---~~d~~~l~~~l~---~~~ 184 (319)
+..+++... ...++|+...++|+++...+.. .+......+..+. ..+ ..|++.+++.+. +++
T Consensus 117 ~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~ 196 (423)
T TIGR00713 117 TMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEI 196 (423)
T ss_pred HHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcE
Confidence 999888643 2458999999999886433322 1111000010000 000 027889998886 456
Q ss_pred eEEEEc-CCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc
Q 020968 185 VALVII-NPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (319)
Q Consensus 185 ~~v~l~-~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~ 262 (319)
++|++. .++| +|.+.+ .+.+++|.++|+++|+++|+||+|.++.++. .. ....+..... +.+|||.++ +|+
T Consensus 197 aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~-~~-~~~~~~~~pD---i~t~sK~l~-~G~ 269 (423)
T TIGR00713 197 AGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL-GG-AQEYFGVEPD---LTTLGKIIG-GGL 269 (423)
T ss_pred EEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc-ch-hHHHhCCCcc---hhhhhhhhc-CCC
Confidence 677765 6777 788877 6889999999999999999999999885432 11 1111221122 237999987 899
Q ss_pred eeeEEEeeCCCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH
Q 020968 263 RLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 263 r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l 307 (319)
|+||++++. ++++.+... ...+.+.++++|.++..++
T Consensus 270 pig~v~~~~--------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l 310 (423)
T TIGR00713 270 PVGAFGGRR--------EIMERLAPEGPVYQAGTLSGNPLAMAAGLATL 310 (423)
T ss_pred ceeeeeEHH--------HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHH
Confidence 999999853 466666531 1224467888888766654
No 211
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=1.9e-17 Score=152.74 Aligned_cols=170 Identities=17% Similarity=0.167 Sum_probs=128.9
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~ 163 (319)
...+|++.++++++ .. +.+ ++++|+.++.+++. ++++||+|+++.|.|.... ..++..|+++..++.
T Consensus 55 ~~~~le~~lA~l~g------~~-~~v-~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 55 TREALEDIIAELEG------GT-KGF-AFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred hHHHHHHHHHHHhC------CC-CeE-EECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 46788999998883 22 344 44555778888886 6789999999999997432 455678999988875
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 243 (319)
.|++++++.+++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .++ .+
T Consensus 126 -------~d~~~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~~-- 188 (390)
T PRK08064 126 -------TNLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-DL-- 188 (390)
T ss_pred -------CCHHHHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc----Cch-hh--
Confidence 2789999999888999999999999999954 889999999999999999999864321 111 12
Q ss_pred CCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968 244 IVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 291 (319)
+..+++.|+||.++.+ |...|++++.+ +++.++++..+..
T Consensus 189 -g~Divv~S~tK~~~G~~~~laG~~v~~~-------~~~~~~l~~~~~~ 229 (390)
T PRK08064 189 -GADVVLHSATKFLAGHSDVLAGLAVVKD-------EELAQKLYFLQNS 229 (390)
T ss_pred -CCcEEEeecceeccCCccceeEEEEeCC-------HHHHHHHHHHHHh
Confidence 2348999999998754 46778877654 2477777766653
No 212
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.78 E-value=4.4e-17 Score=149.68 Aligned_cols=169 Identities=21% Similarity=0.252 Sum_probs=126.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~ 163 (319)
....|++.++++.+ .+..+++++++.|+.+++ .++++||+|++++|.|.... ..+...|+++..++.
T Consensus 51 ~~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 51 TRFALEELIADLEG--------GVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred hHHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 46788888888872 334566666678998766 46789999999999997543 345667888777764
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 243 (319)
.|++++++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|....+.. ++ ...
T Consensus 122 -------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~----p~-~~g- 185 (380)
T PRK06176 122 -------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQN----PL-LLG- 185 (380)
T ss_pred -------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCC----cc-ccC-
Confidence 3899999999888999999999999999965 8899999999999999999998644321 22 122
Q ss_pred CCCeEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968 244 IVPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 290 (319)
-.+++.|++|.++.+|- -.|++++.+ +++.++++..+.
T Consensus 186 --aDivv~S~tK~l~g~~d~~gG~vv~~~-------~~~~~~~~~~~~ 224 (380)
T PRK06176 186 --ADIVVHSGTKYLGGHSDVVAGLVTTNN-------EALAQEIAFFQN 224 (380)
T ss_pred --CCEEEecCceeccCCccceeeEEEecH-------HHHHHHHHHHHH
Confidence 23999999999988764 455555533 246666665544
No 213
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.77 E-value=3.7e-17 Score=149.92 Aligned_cols=165 Identities=16% Similarity=0.147 Sum_probs=124.2
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch--HHHHhhCCCeEEEEeccCC
Q 020968 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY--EARATHSHLEVRHFDLLPA 166 (319)
Q Consensus 89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~ 166 (319)
.+++|+.+++++ |..-+++.|++|+|++++++.++.++..+||++++..+.+.+. ...++..|.+++.++.++
T Consensus 37 ~~~~r~~la~l~----~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~- 111 (363)
T TIGR02326 37 VEQIRQQLLALA----TAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGE- 111 (363)
T ss_pred HHHHHHHHHHHh----CCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC-
Confidence 345566666666 3222234799999999999999999988888877766655443 466788999999998753
Q ss_pred CCCcCCHHHHHhhhcc--CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968 167 KGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (319)
Q Consensus 167 ~~~~~d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 244 (319)
+..+|++.+++++++ +++++++++++||||..++ +++|.++|+++|+++++|++++. +..+.++..++.
T Consensus 112 -~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~----g~~~~~~~~~~~- 182 (363)
T TIGR02326 112 -VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF----GGIPIDIAELHI- 182 (363)
T ss_pred -CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc----cCcccchhhcCc-
Confidence 456899999998874 3467888999999999977 78999999999999999988763 222334444332
Q ss_pred CCeEEEecCccccC-CCcceeeEEEeeC
Q 020968 245 VPVLTLGSISKRWI-VPGWRLGWLVTSD 271 (319)
Q Consensus 245 ~~vi~~~s~sK~~~-~~G~r~G~i~~~~ 271 (319)
.+++.|++|+++ .+| +||++++.
T Consensus 183 --D~~~~s~~K~l~~p~G--~G~l~~~~ 206 (363)
T TIGR02326 183 --DYLISSANKCIQGVPG--FGFVIARQ 206 (363)
T ss_pred --cEEEecCccccccCCc--ceEEEECH
Confidence 388899999863 346 79998854
No 214
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=5.9e-17 Score=148.49 Aligned_cols=182 Identities=16% Similarity=0.141 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEEEeccC
Q 020968 90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFDLLP 165 (319)
Q Consensus 90 ~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~ 165 (319)
...++.+++.+....+ .+..++++++++|++.++.+++++||+|+++.|.|.++.. .++..|+++..++..
T Consensus 63 nPt~~~Le~~la~le~----~~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~- 137 (395)
T PRK05967 63 TPTTDALCKAIDALEG----SAGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE- 137 (395)
T ss_pred ChHHHHHHHHHHHHhC----CCCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-
Confidence 3444444444433222 3345666668999999999999999999999999988764 457889988887531
Q ss_pred CCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968 166 AKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (319)
Q Consensus 166 ~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~ 245 (319)
+.+.+++++++++++|++++|+||++.+ .++++|+++|+++|+++++|++|....+- .++. + +
T Consensus 138 ------~~e~l~~al~~~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~~----~pl~-~---G 200 (395)
T PRK05967 138 ------IGAGIAKLMRPNTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLYF----RPLD-F---G 200 (395)
T ss_pred ------CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCceec----ChhH-c---C
Confidence 4577999999899999999999998877 78999999999999999999999863321 1111 2 2
Q ss_pred CeEEEecCccccCC-CcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHH
Q 020968 246 PVLTLGSISKRWIV-PGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQF 301 (319)
Q Consensus 246 ~vi~~~s~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~ 301 (319)
..|++.|.+|..+. .+...|+++. ++ ++.++++.... .....++...+
T Consensus 201 aDivv~S~tKy~~Gh~d~~~G~v~~-~~-------~~~~~l~~~~~~~G~~~~p~da~ 250 (395)
T PRK05967 201 VDISIHAATKYPSGHSDILLGTVSA-NE-------KCWPQLLEAHGTLGLCAGPDDTY 250 (395)
T ss_pred CCEEEEecccccCCCCCeeEEEEEc-CH-------HHHHHHHHHHHHcCCCCCHHHHH
Confidence 34999999999766 3566665543 32 35555553333 23344554433
No 215
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.77 E-value=2.3e-17 Score=147.20 Aligned_cols=197 Identities=21% Similarity=0.256 Sum_probs=156.7
Q ss_pred EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-----CCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-----FNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-----~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
|.|+....+ ++.+++.++|...+.... .+.|+- ....++.|+.+|+.+ ++++++|++|+|+|
T Consensus 3 iYlD~~ATT-----p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~T 71 (386)
T COG1104 3 IYLDNAATT-----PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGAT 71 (386)
T ss_pred ccccccccC-----CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCCc
Confidence 445555533 778999999998876531 112221 133578888899888 56889999999999
Q ss_pred HHHHHHHHHh--c----CCCCEEEEcCCCCcchHHHHhhC---CCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968 121 QAIEVILTVL--A----RPGANILLPRPGFPYYEARATHS---HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191 (319)
Q Consensus 121 ~ai~~~~~~l--~----~~gd~Vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~ 191 (319)
++.++++... . +.|.+|+++.-.|+.....++.+ |.++.+++++. +..+|+++|++++++++.+|.+..
T Consensus 72 EsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim~ 149 (386)
T COG1104 72 ESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIMH 149 (386)
T ss_pred HHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEEe
Confidence 9999999873 2 25789999999998877777666 99999999865 457999999999999999999999
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~ 269 (319)
.||.+|++ +++++|.++|+++++++++|.++.. |+-+..+..+.- .+...|-+|.+|..| +|.+..
T Consensus 150 aNnE~G~I---QpI~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~v---D~ls~SaHK~~GpkG--iGaLyv 215 (386)
T COG1104 150 ANNETGTI---QPIAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGV---DLLSFSAHKFGGPKG--IGALYV 215 (386)
T ss_pred cccCeeec---ccHHHHHHHHHHcCCeEEEehhhhc----CceeccccccCc---ceEEeehhhccCCCc--eEEEEE
Confidence 99999999 5699999999999999999999987 555555554332 377889999988888 677765
No 216
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.77 E-value=6.6e-17 Score=153.01 Aligned_cols=207 Identities=16% Similarity=0.170 Sum_probs=151.3
Q ss_pred EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCC---CCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY---SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (319)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~ 124 (319)
.-++.|+++ +..++.+.+++.+...-.....| ....|..+++..+.+++.+.+|. +...+..++|+.+.+.
T Consensus 71 ~~~g~G~~~----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~~~~l~~~~GA~a~~~ 144 (481)
T PRK04366 71 GFYPLGSCT----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--DAVTLQPAAGAHGELT 144 (481)
T ss_pred ceecCcccC----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--CceEEEeCcHHHHHHH
Confidence 346777766 57888999988875222234567 34567889999999999887774 3334444555555554
Q ss_pred HH--HH-HhcCCCC----EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccc
Q 020968 125 VI--LT-VLARPGA----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG 197 (319)
Q Consensus 125 ~~--~~-~l~~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG 197 (319)
.+ ++ .+.++|| +|+++.|.|+.+...++..|++++.++.+ .++.+|++++++++++++++|++++|+ |||
T Consensus 145 ~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG 221 (481)
T PRK04366 145 GLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLG 221 (481)
T ss_pred HHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Ccc
Confidence 32 33 3456666 99999999999999999999999999874 346899999999998889999999988 999
Q ss_pred cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceeeEEEeeC
Q 020968 198 NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTSD 271 (319)
Q Consensus 198 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i~~~~ 271 (319)
.+ ..++++|+++|+++|+++++|.++..-..+ . .....+ +-.++++|.+|+|+.| |-.+|++.+.+
T Consensus 222 ~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g-~--~~~~~~---GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~ 291 (481)
T PRK04366 222 LF--ERNILEIAEIVHEAGGLLYYDGANLNAILG-K--ARPGDM---GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE 291 (481)
T ss_pred cc--chHHHHHHHHHHHcCCEEEEEecChhhhcc-c--CCcccc---CCCEEEEechhhcCCCCCCCCCCeeeeeehh
Confidence 64 357999999999999999999998532111 1 111222 2349999999998765 45678877643
No 217
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.77 E-value=3.7e-17 Score=151.62 Aligned_cols=238 Identities=14% Similarity=0.076 Sum_probs=153.4
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|--...- ---.|.+.+++.++++..... ... ...+....+++.+.+.. ..+.+++++++++|
T Consensus 38 ~G~~~lD~~~g~~~~~l-Gh~~p~v~~ai~~~~~~~~~~--~~~-~~~~~~~~l~~~l~~~~----~~~~~~~~~SGseA 109 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQ-GHRHPKIIQALKDQADKVTLT--SRA-FHSDQLGPWYEKVAKLT----GKDMVLPMNTGAEA 109 (396)
T ss_pred CCCEEEEcCCCHHhccC-CCCCHHHHHHHHHHHhhcccc--ccc-cCCHHHHHHHHHHHhcC----CCCeEEEcCChHHH
Confidence 36667787766322111 124688999999888754321 111 11223333444443322 24689999999999
Q ss_pred HHHHHHHhcC---------CC-CEEEEcCCCCcchH-HHHhhCCCe------------EEEEeccCCCCCcCCHHHHHhh
Q 020968 123 IEVILTVLAR---------PG-ANILLPRPGFPYYE-ARATHSHLE------------VRHFDLLPAKGWEVDLDAVEAL 179 (319)
Q Consensus 123 i~~~~~~l~~---------~g-d~Vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~ 179 (319)
+..+++.... +| ++|+...-+|++.. ......+.. +..++. .|++.+++.
T Consensus 110 ~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 182 (396)
T PRK04073 110 VETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALKAA 182 (396)
T ss_pred HHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHHHh
Confidence 9999887631 34 67888877776543 222222211 111111 278999998
Q ss_pred hccCceEEEEcCCCCccccccCHH-HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC
Q 020968 180 ADENTVALVIINPGNPCGNVYTYQ-HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI 258 (319)
Q Consensus 180 l~~~~~~v~l~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~ 258 (319)
+++++++|++..++||+|.+++.+ .+++|.++|+++|+++|+||+|.++...+.... .........+ .++||.++
T Consensus 183 i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~pdi---~~~sK~lg 258 (396)
T PRK04073 183 ITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVTPDM---YILGKALG 258 (396)
T ss_pred cccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCCCCE---EEeccccc
Confidence 887888888888899999988755 599999999999999999999998766553221 1111111222 35799999
Q ss_pred CCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968 259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
++|+|+||++++. ++++.+..... ...+.+++.|.++..++
T Consensus 259 ~gg~~ig~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aaL 300 (396)
T PRK04073 259 GGVFPISCVAANR--------DILGVFTPGSHGSTFGGNPLACAVSIAAL 300 (396)
T ss_pred CCCCcceEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999853 46666654322 34456888888777655
No 218
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.76 E-value=8.1e-17 Score=145.82 Aligned_cols=214 Identities=19% Similarity=0.214 Sum_probs=169.2
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~ 117 (319)
+..++||+.+| |..+.-.|.+.+++.+.++.... .-++...-+.+|++.+|+|+ ..+..++.+
T Consensus 38 ~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f~ 106 (388)
T COG0156 38 GRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLFS 106 (388)
T ss_pred CceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEEc
Confidence 57799999999 45577788899998888876321 12444455788999999998 456788888
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcC
Q 020968 118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIIN 191 (319)
Q Consensus 118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~ 191 (319)
++-.|+..++.++++++|.|+...-.|.+....++..+.+.+.+.- .|++.||+.+.+ +.++|+...
T Consensus 107 SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivteg 179 (388)
T COG0156 107 SGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEG 179 (388)
T ss_pred ccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEec
Confidence 8888999999999999999999999999999999999999887774 488999998865 245666667
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc--cCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV--FGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~~~~vi~~~s~sK~~~~~G~r~G~i~~ 269 (319)
.-...|.+ .++.+|++++++|+.++++||+|+-..+++........ +...+..|+++||+|+||..| ||+++
T Consensus 180 VfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g 253 (388)
T COG0156 180 VFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAG 253 (388)
T ss_pred cccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeC
Confidence 78889999 45999999999999999999999988877544333322 333455799999999999998 99998
Q ss_pred eCCCCCccchHHHHHHHHhh
Q 020968 270 SDPNGILQDSGIVDSIKSFL 289 (319)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~ 289 (319)
+. .+++.++...
T Consensus 254 ~~--------~~~d~L~~~a 265 (388)
T COG0156 254 SA--------ALIDYLRNRA 265 (388)
T ss_pred cH--------HHHHHHHHhC
Confidence 54 4666666553
No 219
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=5.2e-17 Score=151.24 Aligned_cols=157 Identities=18% Similarity=0.172 Sum_probs=128.6
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~ 163 (319)
...+|++.+|+++. .+..++++++++|+++++.++.++||+|+++...|...... +...|+++..++.
T Consensus 65 ~~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 65 TVAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 46789999998883 33578999999999999999999999999999999765433 3558988888875
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 243 (319)
+ |++++++++++++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|.++..-.. ..++ .+.
T Consensus 137 ~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~----~~pl-~~G- 200 (433)
T PRK08134 137 G-------DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL----LRPF-EHG- 200 (433)
T ss_pred C-------CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCch-hcC-
Confidence 2 799999999999999999999999999965 89999999999999999999875221 1222 222
Q ss_pred CCCeEEEecCccccCCCcceeeEEEee
Q 020968 244 IVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
-.+++.|.+|.++.+|..+|.+++.
T Consensus 201 --aD~vv~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 201 --ADLVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred --CCEEEeccccccCCCCCceEEEEEe
Confidence 2399999999998899888887663
No 220
>PLN02509 cystathionine beta-lyase
Probab=99.76 E-value=1.1e-16 Score=149.63 Aligned_cols=165 Identities=20% Similarity=0.240 Sum_probs=124.2
Q ss_pred CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCe
Q 020968 82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLE 157 (319)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~ 157 (319)
.|... |.+ .++++.+.+.+.. ..+..++++++++++..++ .++++||+|+++.+.|..+.. .+...|++
T Consensus 126 ~Y~r~-gnp-t~~aLE~~lA~le----g~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~ 198 (464)
T PLN02509 126 DYTRS-GNP-TRDALESLLAKLD----KADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVV 198 (464)
T ss_pred ccCCC-CCH-HHHHHHHHHHHHh----CCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeE
Confidence 57654 443 4666666665533 3567778888899997666 567899999999999988753 34567888
Q ss_pred EEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC
Q 020968 158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237 (319)
Q Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~ 237 (319)
+..++. .|++++++++++++++|++++|+||+|.+ .++++|+++|+++|+++|+|++|...... . +
T Consensus 199 v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-~---p 264 (464)
T PLN02509 199 VKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVLS-R---P 264 (464)
T ss_pred EEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccccC-C---h
Confidence 887753 37899999998889999999999999998 77999999999999999999998754321 1 1
Q ss_pred CcccCCCCCeEEEecCccccCCCcc-eeeEEEeeC
Q 020968 238 MGVFGSIVPVLTLGSISKRWIVPGW-RLGWLVTSD 271 (319)
Q Consensus 238 ~~~~~~~~~vi~~~s~sK~~~~~G~-r~G~i~~~~ 271 (319)
+. . ...+++.|++|.++.+|- -.|.+++.+
T Consensus 265 l~-~---gaDivv~S~tK~l~G~gdv~gG~v~~~~ 295 (464)
T PLN02509 265 LE-L---GADIVMHSATKFIAGHSDVMAGVLAVKG 295 (464)
T ss_pred hh-c---CCcEEEecCcccccCCCccceeEEEecc
Confidence 11 1 224999999999877554 456666543
No 221
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.76 E-value=6.3e-17 Score=148.86 Aligned_cols=167 Identities=20% Similarity=0.229 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc------CCCCEEEEcCCCCcchHHHHhhCCCeEEEEec
Q 020968 90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA------RPGANILLPRPGFPYYEARATHSHLEVRHFDL 163 (319)
Q Consensus 90 ~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 163 (319)
.++++.+++++ +++++++++++|+++++..++.++. ++||+|+++.+.|..+...++..|++++.++.
T Consensus 62 ~~~~~~la~~~------g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~ 135 (373)
T TIGR03812 62 EEVVGSLGNLL------HLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPL 135 (373)
T ss_pred HHHHHHHHHHh------CCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEee
Confidence 45666666666 3456788999999999988877654 36789999999999999999999999999987
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC------CCCCCC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG------NTPFVP 237 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~------~~~~~~ 237 (319)
+ .++.+|++++++.+.+++..+++..|+||||.+.+ +++|.++|+++|+++++|++|+.+... +.....
T Consensus 136 ~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d 210 (373)
T TIGR03812 136 D--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD 210 (373)
T ss_pred C--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc
Confidence 5 35678999999998877755555568999999955 888999999999999999999865321 000111
Q ss_pred CcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 238 ~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+... .-..+..|.+|+ ++++.++|+++..+
T Consensus 211 ~~~~---~~d~~~~s~~K~-~~~~~~~G~~~~~~ 240 (373)
T TIGR03812 211 FSLP---GVQSITIDPHKM-GLSPIPAGGILFRS 240 (373)
T ss_pred ccCC---CCCEEEECcccc-CCCcCCceEEEEeC
Confidence 1110 111455688894 78888999877644
No 222
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.76 E-value=3.3e-16 Score=146.31 Aligned_cols=211 Identities=19% Similarity=0.227 Sum_probs=149.9
Q ss_pred CeEeccCCCCCCCCC-CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968 46 PLIPLGHGDPSAFPS-FRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (319)
Q Consensus 46 ~~i~l~~g~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~ 124 (319)
.+..|+.|.|+.-.. ...+..-.+++.+.+..... .+++ ...+|++++++++. .+++++++|+++|+.
T Consensus 24 ~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~-~~G~--~~~~fe~~lA~~~g--------~~~~v~~~sGt~al~ 92 (438)
T PRK15407 24 APKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL-TTGR--FNDAFEKKLAEFLG--------VRYALLVNSGSSANL 92 (438)
T ss_pred ccccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc-cCCh--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHH
Confidence 345578888764111 12233334445454444322 3333 35799999999983 357999999999999
Q ss_pred HHHHHh---------cCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc
Q 020968 125 VILTVL---------ARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (319)
Q Consensus 125 ~~~~~l---------~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 195 (319)
.++.++ +++||+|+++.++|..+...+...|++++.+++++ ..+.+|++.+++.+.+++++|+++++
T Consensus 93 ~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~--- 168 (438)
T PRK15407 93 LAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT--- 168 (438)
T ss_pred HHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---
Confidence 999876 37899999999999999999999999999998864 45789999999999888999998875
Q ss_pred cccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc-CCCCCCCCCcccCCCCCeEEEecCc--cccCCCcceeeEEEeeCC
Q 020968 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDP 272 (319)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~s--K~~~~~G~r~G~i~~~~~ 272 (319)
+|.. .++++|.++|+++|++||+|++++... +.+.. +.++.+ +.+.||. |.+. .|- -|++++.++
T Consensus 169 ~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~---~G~~gd----~~~fSf~~~k~~~-~ge-GG~l~t~d~ 236 (438)
T PRK15407 169 LGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRM---TGTFGD----IATLSFYPAHHIT-MGE-GGAVFTNDP 236 (438)
T ss_pred CCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCCee---eeccCc----eEEEeCCCCCCcc-ccC-ceEEEECCH
Confidence 4443 468999999999999999999998643 33322 223332 5556665 5543 233 489888653
Q ss_pred CCCccchHHHHHHHHhhh
Q 020968 273 NGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~ 290 (319)
++.++++..+.
T Consensus 237 -------~l~~~~~~~~~ 247 (438)
T PRK15407 237 -------LLKKIIESFRD 247 (438)
T ss_pred -------HHHHHHHHHHH
Confidence 47776665544
No 223
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.76 E-value=8.7e-17 Score=149.42 Aligned_cols=237 Identities=14% Similarity=0.092 Sum_probs=153.0
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC-CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
.+..+++|..|.-.... ---.|.+.+++.++++...... +.......+|.+.++++. ..+.+++++++++
T Consensus 39 ~g~~~lD~~~~~~~~~~-Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~ 109 (401)
T PRK00854 39 DGNRYLDCLSAYSAVNQ-GHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT--------GSHKVLPMNSGAE 109 (401)
T ss_pred CCCEEEEcCcchhhccC-CCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC--------CCCEEEEeCCcHH
Confidence 35667887666322100 1126889999998887643211 112223445666666554 2468999999999
Q ss_pred HHHHHHHHhcC---------CC-CEEEEcCCCCcchHHHHhhCCC-------------eEEEEeccCCCCCcCCHHHHHh
Q 020968 122 AIEVILTVLAR---------PG-ANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEVDLDAVEA 178 (319)
Q Consensus 122 ai~~~~~~l~~---------~g-d~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~ 178 (319)
|+..+++.+.. +| ++|++..-.|.+....+...+. ++..++ ..|++.+++
T Consensus 110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~ 182 (401)
T PRK00854 110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEA 182 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHH
Confidence 99999988742 23 6788877777664322222221 111121 148899999
Q ss_pred hhccCceEEEEcCCCCccccccCH-HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc
Q 020968 179 LADENTVALVIINPGNPCGNVYTY-QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW 257 (319)
Q Consensus 179 ~l~~~~~~v~l~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~ 257 (319)
.+.+++++|++.+|+||+|.+++. +.+++|.++|+++|+++|+||+|.++.+.+... .......... +++ ++|++
T Consensus 183 ~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~-~~~~~g~~~D-~~~--~~K~l 258 (401)
T PRK00854 183 AITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL-AEEHEGIEAD-VTL--IGKAL 258 (401)
T ss_pred HhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh-HHhhcCCCCC-EEE--ecccc
Confidence 998889999999999999999874 459999999999999999999998765554211 1111111112 333 36998
Q ss_pred CCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968 258 IVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 258 ~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
+...+|+||+++++ ++++.+..... ...+.+++.|.++..++
T Consensus 259 ~gg~~~ig~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aa~~a~L 301 (401)
T PRK00854 259 SGGFYPVSAVLSNS--------EVLGVLKPGQHGSTFGGNPLACAVARAAL 301 (401)
T ss_pred cCCccCeEEEEEcH--------HHHhcccCCCCCCCCCcCHHHHHHHHHHH
Confidence 66558999999854 46665543222 23456788887777655
No 224
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.76 E-value=5.5e-16 Score=143.60 Aligned_cols=214 Identities=14% Similarity=0.139 Sum_probs=155.8
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC------CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
..+++|+.+| |..+...|.++++..+.+++.... -++....+.+|++.+|+++ ..+..++.++
T Consensus 102 r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--------g~e~all~sS 170 (476)
T PLN02955 102 KKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--------KKEDCLVCPT 170 (476)
T ss_pred ceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--------CCCcEEEECC
Confidence 4789999998 455788899999999888764321 1222223478999999998 5678888888
Q ss_pred HHHHHHHHHHHhc--------------CCCCEEEEcCCCCcchHHHHhhC----CCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 119 CTQAIEVILTVLA--------------RPGANILLPRPGFPYYEARATHS----HLEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 119 ~t~ai~~~~~~l~--------------~~gd~Vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
+..|...++.++. ++++.|++..-.|.+....++.. +.++..++. -|++.|++.+
T Consensus 171 Gy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~L 243 (476)
T PLN02955 171 GFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSLL 243 (476)
T ss_pred hHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHHH
Confidence 8888888888762 45678888888898877777765 466665553 3888898887
Q ss_pred cc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccc
Q 020968 181 DE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKR 256 (319)
Q Consensus 181 ~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~ 256 (319)
+. +.+.|++....++.|.+.+ +++|.++|++||+++|+||+|+.+.++.........+. ..+..|+++||||+
T Consensus 244 ~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA 320 (476)
T PLN02955 244 SSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKA 320 (476)
T ss_pred HhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccc
Confidence 43 3345555555899999976 88888999999999999999998777543222222222 13567999999999
Q ss_pred cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 290 (319)
+|..| |++++++ ++++.++....
T Consensus 321 ~G~~G---Gfi~gs~--------~~~~~l~~~~~ 343 (476)
T PLN02955 321 AGCHG---GFIACSK--------KWKQLIQSRGR 343 (476)
T ss_pred hhccC---ceeecHH--------HHHHHHHHhCC
Confidence 87777 9998854 46777775543
No 225
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.75 E-value=3e-16 Score=144.82 Aligned_cols=194 Identities=22% Similarity=0.244 Sum_probs=144.5
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCC
Q 020968 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRP 142 (319)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p 142 (319)
.+...+++.+.+..+. |.......+||++++++++ .++.++++|+++|+..++.++ +++||+|+++.+
T Consensus 9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~ 77 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVG--------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPI 77 (380)
T ss_pred CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHC--------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCc
Confidence 4555777777776543 3333467899999999993 245677778999999999998 789999999999
Q ss_pred CCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCE
Q 020968 143 GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIM 218 (319)
Q Consensus 143 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 218 (319)
+|..+...+...|++++.+++++ +++.+|++++++.++ +++++|++++ ++|... ++++|.++|+++|++
T Consensus 78 ~~~~~~~~~~~~G~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~---~~~~i~~l~~~~~~~ 150 (380)
T TIGR03588 78 TFVATANCALYCGAKVDFVDIDP-DTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSV---DMQAIAALAKKHGLK 150 (380)
T ss_pred chHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccC---CHHHHHHHHHHcCCE
Confidence 99999888999999999999865 346799999999998 6788887654 578774 489999999999999
Q ss_pred EEEeCCCCCcc-CCCCCCCCCcccCCCCCeEEEecCc--cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968 219 VIADEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL 289 (319)
Q Consensus 219 li~D~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 289 (319)
||+|++++... +++.. +....-. .+.+.|++ |.++.+ ..|+++..++ ++.++++..+
T Consensus 151 lI~D~a~a~g~~~~~~~---~g~~~~~--d~~~~S~~~~K~~~~~--~GG~v~~~~~-------~~~~~~~~~~ 210 (380)
T TIGR03588 151 IIEDASHALGAEYGGKP---VGNCRYA--DATVFSFHPVKIITTA--EGGAVTTNDE-------ELAERMRLLR 210 (380)
T ss_pred EEEECCCcccCccCCEe---CCCcccc--ceEEEecCCCCccccc--CceEEEECCH-------HHHHHHHHHH
Confidence 99999998642 33322 2221011 26677765 876543 4677777553 4677666543
No 226
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=1.1e-16 Score=149.10 Aligned_cols=157 Identities=19% Similarity=0.179 Sum_probs=127.4
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~ 163 (319)
....|++.++++. ..+..++++++++|+.+++.+++++||+|+++.+.|.... ..+...|++++.++.
T Consensus 64 ~~~~le~~lA~l~--------g~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 64 TNAVLEERVAALE--------GGTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred cHHHHHHHHHHHh--------CCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 4577888888887 3345888999999999999999999999999999998643 346778998888764
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 243 (319)
.|++.+++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|..... ..++ .+
T Consensus 136 -------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~----~~pl-~~-- 198 (427)
T PRK05994 136 -------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL----IRPI-EH-- 198 (427)
T ss_pred -------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc----CCcc-cc--
Confidence 2789999999888999999999999999976 88999999999999999999975221 1122 12
Q ss_pred CCCeEEEecCccccCCCcceeeEEEee
Q 020968 244 IVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
...+++.|++|.++.+|-.+|.+++.
T Consensus 199 -gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 199 -GADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred -CCcEEEEcCccccCCCCCcEEEEEEe
Confidence 22399999999999888778877663
No 227
>PRK07505 hypothetical protein; Provisional
Probab=99.75 E-value=3.7e-16 Score=145.21 Aligned_cols=230 Identities=14% Similarity=0.162 Sum_probs=142.6
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC-CCCCCC-----CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR-FNCYSS-----TVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~-----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~ 117 (319)
+..++||...++ ..+...|.+.+++.+++.... ...... .....++++.+++++ | . +.++++
T Consensus 45 g~~~ld~~s~~~---lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~----~----~-~~~~~~ 112 (402)
T PRK07505 45 GHTFVNFVSCSY---LGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF----G----A-SVLTFT 112 (402)
T ss_pred CceEEEeecCCc---cCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh----C----C-CEEEEC
Confidence 666888877542 223668999999999886521 111111 123355666666655 2 2 445444
Q ss_pred CHHHHHHHHHHHhc----CCCC-EEEEcCCCCcc-hH--HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEE
Q 020968 118 GCTQAIEVILTVLA----RPGA-NILLPRPGFPY-YE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVI 189 (319)
Q Consensus 118 G~t~ai~~~~~~l~----~~gd-~Vl~~~p~~~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l 189 (319)
++++|...++..+. .+|+ .|++.+..|++ +. ......+.+++.++. .|++.+++++.++++++++
T Consensus 113 sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~vl 185 (402)
T PRK07505 113 SCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAYV 185 (402)
T ss_pred ChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEEE
Confidence 55667776665432 2232 35555545433 21 111223456666654 3889999988777789999
Q ss_pred cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC-CCCcccC--CCCCeEEEecCccccCCCcceeeE
Q 020968 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF-VPMGVFG--SIVPVLTLGSISKRWIVPGWRLGW 266 (319)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~--~~~~vi~~~s~sK~~~~~G~r~G~ 266 (319)
++|+||+|.+++ +++|.++|+++++++|+||+|+...++.... .....+. ..+++++++|+||.|+++| ||
T Consensus 186 ~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~ 259 (402)
T PRK07505 186 ADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GV 259 (402)
T ss_pred EecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eE
Confidence 999999999987 7888899999999999999986543332111 1111222 3467899999999998887 88
Q ss_pred EEeeCCCCCccchHHHHHHHHhhhh--c-CCcchHHHHHHHH
Q 020968 267 LVTSDPNGILQDSGIVDSIKSFLNI--S-SDPATFIQFLKSS 305 (319)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~q~~~~~ 305 (319)
+++++ +++++.++..... + ..+++++..++..
T Consensus 260 ~~~~~-------~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a 294 (402)
T PRK07505 260 IMLGD-------AEQIELILRYAGPLAFSQSLNVAALGAILA 294 (402)
T ss_pred EEeCC-------HHHHHHHHHhCCCceeCCCCCHHHHHHHHH
Confidence 87544 2477777665432 1 2334455555444
No 228
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.75 E-value=3.5e-16 Score=143.89 Aligned_cols=199 Identities=23% Similarity=0.291 Sum_probs=149.2
Q ss_pred EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC----CCC----CcCCHHHHHHHHHHHhhhCCCCCCC-CcEEEeCC
Q 020968 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC----YSS----TVGILPARRAIADYLNRDLPYKLSP-DDVYLTLG 118 (319)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~~~G 118 (319)
|.|+.+.+. +.|+.+.+++.+.+....... +.. .....+.|+.+++++ +.++ ++|++++|
T Consensus 1 iYld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l------g~~~~~~v~~~~~ 69 (371)
T PF00266_consen 1 IYLDNAGTG-----PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL------GAPPDEEVVFTSN 69 (371)
T ss_dssp EEEBTSSS------B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH------TSSTTEEEEEESS
T ss_pred CEeeCCCcc-----CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc------CCccccccccccc
Confidence 345666554 778999999998865432111 111 122357777888888 3466 79999999
Q ss_pred HHHHHHHHHHHh---cCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968 119 CTQAIEVILTVL---ARPGANILLPRPGFPYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191 (319)
Q Consensus 119 ~t~ai~~~~~~l---~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~ 191 (319)
++.+++.++.++ .++|++|++.+-.|++.. ...+..|+++..++.+.. ..+|++++++.++++++++++++
T Consensus 70 ~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~--~~~~~~~~~~~l~~~~~lv~~~~ 147 (371)
T PF00266_consen 70 GTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG--GSLDLEDLEEALNPDTRLVSISH 147 (371)
T ss_dssp HHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT--SSCSHHHHHHHHHTTESEEEEES
T ss_pred cchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccccc--chhhhhhhhhhhccccceEEeec
Confidence 999999999999 789999999999987644 455578999999987643 36899999999999999999999
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
.+|.||...+ +++|.++|+++|+++++|.+++. +..+..+..++ -.+++.|..|.++.+| +|++.+.+
T Consensus 148 ~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~----g~~~id~~~~~---~D~~~~s~~Kl~gp~G--~g~l~v~~ 215 (371)
T PF00266_consen 148 VENSTGVRNP---IEEIAKLAHEYGALLVVDAAQSA----GCVPIDLDELG---ADFLVFSSHKLGGPPG--LGFLYVRP 215 (371)
T ss_dssp BETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTT----TTSS--TTTTT---ESEEEEESTSTTSSST--EEEEEEEH
T ss_pred ccccccEEee---eceehhhhhccCCceeEechhcc----ccccccccccc---cceeeecccccCCCCc--hhhheehh
Confidence 9999999977 88999999999999999999987 33333333333 2389999999544455 78888753
No 229
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.74 E-value=1.7e-16 Score=147.48 Aligned_cols=243 Identities=15% Similarity=0.114 Sum_probs=154.1
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
++..++||..|--..+..+. .|.+.+++.+++..... ++.. ...+....+++.+.+.. ..+.+++++++++|
T Consensus 37 dG~~~lD~~~g~~~~~lGh~-~p~v~~A~~~~~~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~sGseA 108 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHA-HPALREALNEQASKFWH--TGNG-YTNEPVLRLAKKLIDAT----FADRVFFCNSGAEA 108 (406)
T ss_pred CCCEEEEcCcCHhhccCCCC-CHHHHHHHHHHHhhccc--ccCc-cCCHHHHHHHHHHHhhC----CCCeEEEcCCcHHH
Confidence 36678898776322223344 78999999998865211 1111 11222334444444322 24699999999999
Q ss_pred HHHHHHHhc--------CCCCEEEEcCCCCcchHHHHhhCCCeE-EE---EeccC--CCCCcCCHHHHHhhhccCceEEE
Q 020968 123 IEVILTVLA--------RPGANILLPRPGFPYYEARATHSHLEV-RH---FDLLP--AKGWEVDLDAVEALADENTVALV 188 (319)
Q Consensus 123 i~~~~~~l~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~~-~~---~~~~~--~~~~~~d~~~l~~~l~~~~~~v~ 188 (319)
+..+++... ....+|+..+..|++....+...+... .. .+..+ ..-...|++.+++.+.+++++|+
T Consensus 109 ~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi 188 (406)
T PRK12381 109 NEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVI 188 (406)
T ss_pred HHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEE
Confidence 999998752 134789999999987654333222211 00 00000 00012478999998877766666
Q ss_pred EcCCCCcccccc--CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968 189 IINPGNPCGNVY--TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (319)
Q Consensus 189 l~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~ 266 (319)
+ .|.|++|-++ +.+.++++.++|++||+++|+||+|.++.+.|... ....+.-... +.++||.++ +|+|+||
T Consensus 189 i-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~~v~pD---i~t~sK~l~-gG~~ig~ 262 (406)
T PRK12381 189 V-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---VLTTAKALG-GGFPIGA 262 (406)
T ss_pred E-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhhCCCCC---EEEehhhhh-CCCceEE
Confidence 5 6888887544 78999999999999999999999998886666432 2122221112 349999975 8999999
Q ss_pred EEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968 267 LVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK 307 (319)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l 307 (319)
+++++ ++++.+.... ..+.+.+++.|.++..++
T Consensus 263 ~~~~~--------~~~~~~~~~~~~~t~~~~pl~~aaa~a~l 296 (406)
T PRK12381 263 MLTTE--------KCASVMTVGTHGTTYGGNPLASAVAGKVL 296 (406)
T ss_pred EEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHH
Confidence 99854 4666665422 233456788887766643
No 230
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.74 E-value=2.3e-16 Score=143.94 Aligned_cols=187 Identities=21% Similarity=0.244 Sum_probs=140.0
Q ss_pred HHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcch
Q 020968 69 DAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPGFPYY 147 (319)
Q Consensus 69 ~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~~~~~ 147 (319)
+++.+.+.++. |.......++++.+++++. .+++++++|+++|+..++.++ .++||+|+++.++|..+
T Consensus 3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~ 71 (352)
T cd00616 3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT 71 (352)
T ss_pred HHHHHHHHcCC---ccCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence 44555555543 3333467899999999982 357888999999999999998 58999999999999999
Q ss_pred HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC
Q 020968 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (319)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~ 227 (319)
...+...|.+++.++.++ .++.+|++.+++.+++++++|++++ ++|...+ +++|.++|+++|+++|+|+++..
T Consensus 72 ~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~ 144 (352)
T cd00616 72 ANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLPVIEDAAQAL 144 (352)
T ss_pred HHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCeEEEECCCCC
Confidence 889999999999998854 3578999999999988888888765 6898855 88888999999999999999985
Q ss_pred ccC-CCCCCCCCcccCCCCCeEEEecCc--cccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968 228 LAF-GNTPFVPMGVFGSIVPVLTLGSIS--KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL 289 (319)
Q Consensus 228 ~~~-~~~~~~~~~~~~~~~~vi~~~s~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 289 (319)
... .+. .+..+. .+.+.|++ |.+ ++.+.|++++.++ ++.++++...
T Consensus 145 g~~~~~~---~~~~~~----d~~~~S~~~~K~~--~~~~gg~~~~~~~-------~~~~~~~~~~ 193 (352)
T cd00616 145 GATYKGR---KVGTFG----DAGAFSFHPTKNL--TTGEGGAVVTNDE-------ELAERARLLR 193 (352)
T ss_pred CCeECCE---EcccCc----ceeEEcCCCCCCC--cccCceEEEECCH-------HHHHHHHHHH
Confidence 321 111 111111 25667766 886 4445688887642 4666665543
No 231
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.72 E-value=2.3e-15 Score=138.33 Aligned_cols=198 Identities=17% Similarity=0.080 Sum_probs=129.4
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC-------CCCCCC------CCcCCHHHHHHHHHHHhhhCCCCCCC
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA-------RFNCYS------STVGILPARRAIADYLNRDLPYKLSP 110 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~-------~~~~Y~------~~~g~~~lr~~ia~~~~~~~g~~~~~ 110 (319)
...+++|+.+|. ..+...+.+.+++.+++... .....+ ...-+.++|+.+|++++. +
T Consensus 3 ~~~~~~~~s~~Y---L~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~-------~ 72 (370)
T PRK05937 3 ESLSIDFVTNDF---LGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA-------P 72 (370)
T ss_pred CCceEEeECCCc---cCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC-------C
Confidence 457899999983 44666677777777665442 111111 223467888888888832 2
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------Cc
Q 020968 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NT 184 (319)
Q Consensus 111 ~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~ 184 (319)
+.+++++|. .++..++..+.++||.|++..-.|......++........++ ..|++.+++.++. .+
T Consensus 73 ~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 73 EAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred eEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCc
Confidence 335556655 555556666667888888888888776666665433333232 2588999988862 34
Q ss_pred eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc
Q 020968 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (319)
Q Consensus 185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~ 262 (319)
.+|++++++|++|.+.+ +++|.++|+++|+++++|++|+...++.........+...+..+.+.|+||.++..|.
T Consensus 145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~ 219 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGA 219 (370)
T ss_pred EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCce
Confidence 56778899999999977 8899999999999999999998643321110000111111223678999999988773
No 232
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.72 E-value=4.9e-16 Score=144.35 Aligned_cols=245 Identities=14% Similarity=0.090 Sum_probs=151.1
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|.-...- --.+|.+.+++.+.++..... ... ...+..+.+.+.+.+.. ..+.+++++++++|
T Consensus 29 dg~~~lD~~~~~~~~~~-Gh~~p~v~~a~~~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~~----~~~~~~~~~SGs~A 100 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQ-GHCHPKILAALINQAQKLTLT--SRA-FYNDVLGLAEKYITDLF----GYDKVLPMNSGAEA 100 (400)
T ss_pred CCCEEEEcccCHhhccC-CcCCHHHHHHHHHHHHhcccc--ccc-ccCHHHHHHHHHHHhCC----CCCEEEEeCCcHHH
Confidence 46778898877432100 124688999999887653221 111 11223344444444322 24689999999999
Q ss_pred HHHHHHHhcC----------CCCEEEEcCCCCcchHHHHh-hCCCeEEEEeccC-CCC----CcCCHHHHHhhhc-cCce
Q 020968 123 IEVILTVLAR----------PGANILLPRPGFPYYEARAT-HSHLEVRHFDLLP-AKG----WEVDLDAVEALAD-ENTV 185 (319)
Q Consensus 123 i~~~~~~l~~----------~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~-~~~----~~~d~~~l~~~l~-~~~~ 185 (319)
+..+++.... .+++|++.+-.|.+...... ..+.........+ ..+ ...|++.+++.+. ++++
T Consensus 101 ~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 180 (400)
T PTZ00125 101 GETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVA 180 (400)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeE
Confidence 9999987641 34788888888876433222 2221110000000 000 0138999999986 5678
Q ss_pred EEEEcCCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968 186 ALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL 264 (319)
Q Consensus 186 ~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~ 264 (319)
+|++..++||+|.+++ .+.+++|.++|++||+++|+||+|.++.+.|.... .........++ ++||.++.+++|+
T Consensus 181 ~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~-~~~~~~~pd~~---~~sK~l~~g~~~i 256 (400)
T PTZ00125 181 AFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLA-HDHEGVKPDIV---LLGKALSGGLYPI 256 (400)
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhH-HHhcCCCCCEE---EEcccccCCCcCc
Confidence 8888888999999886 45599999999999999999999987765553211 11111111223 4689987655699
Q ss_pred eEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968 265 GWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 265 G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
||+++++ ++++.+..... ...+.+++.|.++..++
T Consensus 257 g~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l 292 (400)
T PTZ00125 257 SAVLAND--------DVMLVIKPGEHGSTYGGNPLACAVAVEAL 292 (400)
T ss_pred EEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHH
Confidence 9999864 46666654322 23456777877765543
No 233
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=7.8e-16 Score=143.25 Aligned_cols=158 Identities=20% Similarity=0.144 Sum_probs=124.9
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH----HHhhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEA----RATHSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~ 163 (319)
....|++.++++. ..+..+++++|+.|+..++.+++++||+|++....|.+... .+...|++++.++
T Consensus 70 ~~~~Le~~lA~l~--------g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 70 TQDVVEQRIAALE--------GGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred hHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 4568888888887 34557888889999999999999999999999988876543 3345777777664
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 243 (319)
+. .|++.+++++++++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|+++..-.. ..++ ..
T Consensus 141 d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~----~~pl-~~-- 205 (436)
T PRK07812 141 DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL----IRPL-EH-- 205 (436)
T ss_pred CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CCch-hc--
Confidence 21 2899999999888999999999999999955 89999999999999999999875221 1122 11
Q ss_pred CCCeEEEecCccccCCCcceeeEEEee
Q 020968 244 IVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
.-.+++.|++|.++..|--+|++++.
T Consensus 206 -GaDivv~S~tK~lgg~G~~i~G~vv~ 231 (436)
T PRK07812 206 -GADIVVHSATKYLGGHGTAIAGVIVD 231 (436)
T ss_pred -CCCEEEEecccccCCCCCeEEEEEEc
Confidence 22388899999999998888888774
No 234
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.71 E-value=1.4e-15 Score=139.29 Aligned_cols=182 Identities=10% Similarity=0.124 Sum_probs=134.6
Q ss_pred cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HhhCCCeEEEEe
Q 020968 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR----ATHSHLEVRHFD 162 (319)
Q Consensus 87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~ 162 (319)
+....|++.++++. ..+..+++++++.|++.++.+++++||+|+++...|.+.... ++..|+++..++
T Consensus 62 Pt~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd 133 (395)
T PRK08114 62 LTHFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFD 133 (395)
T ss_pred hhHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEEC
Confidence 34567888888765 456888999999999999999999999999999999765544 467899988876
Q ss_pred ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc--CCEEEEeCCCCCccCCCCCCCCCcc
Q 020968 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGV 240 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~ 240 (319)
. .|.+.+++++++++++|++.+|+||+|.+.+ +++|+++|+++ |+++++|+++..-.. .....
T Consensus 134 ~-------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~-----~~pl~ 198 (395)
T PRK08114 134 P-------LIGADIAKLIQPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL-----FKALD 198 (395)
T ss_pred C-------CCHHHHHHhcCCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc-----cCHHH
Confidence 4 3778999999989999999999999999954 99999999998 499999999976221 11111
Q ss_pred cCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHH
Q 020968 241 FGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFL 302 (319)
Q Consensus 241 ~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~ 302 (319)
+ +-.+++.|.+|.++.+| ...|.++. ++ +..++++.... .....++...+.
T Consensus 199 ~---GaDivv~S~tKyl~Ghsdv~~G~v~~-~~-------~~~~~l~~~~~~~G~~~~p~~a~l 251 (395)
T PRK08114 199 F---GIDISIQAGTKYLVGHSDAMIGTAVA-NA-------RCWEQLRENSYLMGQMVDADTAYM 251 (395)
T ss_pred c---CCcEEEEcCcccccCCCcceeEEEEc-CH-------HHHHHHHHHHHhccCCCCHHHHHH
Confidence 2 23499999999888876 55664443 32 34444543332 233445554444
No 235
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.71 E-value=6.9e-16 Score=141.41 Aligned_cols=193 Identities=23% Similarity=0.348 Sum_probs=142.7
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCC
Q 020968 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPRPG 143 (319)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~p~ 143 (319)
++..+++.+.+.++.+..++ ....+|++.+++++ +.+.++.++++|.|+.+++.++ .++||+|+++.-+
T Consensus 5 ~e~~~~v~~~l~s~~~~~~g--~~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t 74 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLSTYG--PYVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYT 74 (363)
T ss_dssp HHHHHHHHHHHHHTCCSSSS--HHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS
T ss_pred HHHHHHHHHHHHhCCccCCC--HHHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCc
Confidence 45566777777776543333 35689999999999 5678999999999999999998 4789999999999
Q ss_pred CcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeC
Q 020968 144 FPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223 (319)
Q Consensus 144 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (319)
|......+...|++++++++++ +.+.+|++.+++.+++++++|+++|. .|.. .++.+|.++|+++|++||+|.
T Consensus 75 ~~~~~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~---~d~~~i~~~~~~~~i~lIeD~ 147 (363)
T PF01041_consen 75 FPATASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKTKAILVVHL---FGNP---ADMDAIRAIARKHGIPLIEDA 147 (363)
T ss_dssp -THHHHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-
T ss_pred chHHHHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCccEEEEecC---CCCc---ccHHHHHHHHHHcCCcEEEcc
Confidence 9999999999999999999975 56799999999999999999998875 4555 569999999999999999999
Q ss_pred CCCCccC-CCCCCCCCcccCCCCCeEEEecC--ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh
Q 020968 224 VYDHLAF-GNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN 290 (319)
Q Consensus 224 a~~~~~~-~~~~~~~~~~~~~~~~vi~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~ 290 (319)
+++.... .++ .+..+.+ +.+.|| +|.+ +.-.-|.+++.+ +++.++++.++.
T Consensus 148 a~a~g~~~~g~---~~G~~gd----~~~fSf~~~K~i--~~geGG~v~~~~-------~~~~~~~~~~~~ 201 (363)
T PF01041_consen 148 AQAFGARYKGR---PVGSFGD----IAIFSFHPTKII--TTGEGGAVVTND-------PELAERARALRN 201 (363)
T ss_dssp TTTTT-EETTE---ETTSSSS----EEEEESSTTSSS---SSS-EEEEEST-------HHHHHHHHHHTB
T ss_pred ccccCceeCCE---eccCCCC----ceEecCCCCCCC--cCCCCeeEEecH-------HHHHHHhhhhhc
Confidence 9997542 332 2222332 667777 5774 433348888865 458888887665
No 236
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.71 E-value=1.7e-15 Score=140.44 Aligned_cols=237 Identities=15% Similarity=0.124 Sum_probs=149.9
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|--..+..+ -.|.+.+++.++++.... .+.. ...+....+++.+.+.. ..+.+++++++++|
T Consensus 33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~la~~L~~~~----~~~~~~f~~SGseA 104 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWH--IGNG-YTNEPVLRLAKKLVDAT----FADKVFFCNSGAEA 104 (397)
T ss_pred CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhccc--ccCc-cCCHHHHHHHHHHHhhC----CCCEEEEeCCcHHH
Confidence 4678899988732222334 478999999998875211 1111 11233344444444322 24689999999999
Q ss_pred HHHHHHHhc--------CCCCEEEEcCCCCcchHH-HHhhCCCe------------EEEEeccCCCCCcCCHHHHHhhhc
Q 020968 123 IEVILTVLA--------RPGANILLPRPGFPYYEA-RATHSHLE------------VRHFDLLPAKGWEVDLDAVEALAD 181 (319)
Q Consensus 123 i~~~~~~l~--------~~gd~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~l~ 181 (319)
+..+++... ....+|+..+-.|++... .....+.. +..++ ..|++.+++.+.
T Consensus 105 ~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~ 177 (397)
T TIGR03246 105 NEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAP-------YNDLAAAKALIS 177 (397)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeC-------CCCHHHHHHHhc
Confidence 999998762 123577877777766432 22322211 11111 138899999988
Q ss_pred cCceEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC
Q 020968 182 ENTVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP 260 (319)
Q Consensus 182 ~~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~ 260 (319)
+++++|++..++++.|... +.+.+++|.++|+++|+++|+||+|.++...|... ....+.-... + -+++|.++ +
T Consensus 178 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pD-i--~t~~K~lg-g 252 (397)
T TIGR03246 178 DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD-I--LTSAKALG-G 252 (397)
T ss_pred cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCC-E--EEeehhhh-C
Confidence 7777777775566667554 88999999999999999999999998875555322 1112221112 2 37899975 7
Q ss_pred cceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968 261 GWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK 307 (319)
Q Consensus 261 G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l 307 (319)
|+++||+++++ ++++.+.... ..+.+.+++.+.++...+
T Consensus 253 G~pigav~~~~--------~i~~~~~~~~~~~t~~~~p~~~aaa~a~l 292 (397)
T TIGR03246 253 GFPIGAMLTTT--------EIAAHLKVGTHGTTYGGNPLACAVAGKVL 292 (397)
T ss_pred CcceeEEEEcH--------HHHHhccCCCcCCCCCCCHHHHHHHHHHH
Confidence 99999999854 4666664332 223345677776655544
No 237
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=1.7e-15 Score=139.55 Aligned_cols=238 Identities=13% Similarity=0.135 Sum_probs=157.9
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|.-. ..++..|.+.+++.+++.... .++ .....++++.+++.+.. . ....++++++++++
T Consensus 27 dg~~~lD~~s~~~~--~~lG~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~----~-~~~~~~~~~SGseA 96 (375)
T PRK04260 27 DGKKYLDFSSGIGV--TNLGFHPQVQQALQKQAGLIW--HSP-NLYLNSLQEEVAQKLIG----D-KDYLAFFCNSGAEA 96 (375)
T ss_pred CCCEEEECCCCccc--ccCCCCHHHHHHHHHHHHhcC--ccc-CccCCHHHHHHHHHHhc----C-cCCEEEEcCccHHH
Confidence 36678999877321 124557889999999886532 232 23456888899987733 1 12246889999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchH-HHHhhCCCeEE---------EEeccCCCCCcCCHHHHHhhhccCceEEEEc
Q 020968 123 IEVILTVLA--RPGANILLPRPGFPYYE-ARATHSHLEVR---------HFDLLPAKGWEVDLDAVEALADENTVALVII 190 (319)
Q Consensus 123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~-~~~~~~g~~~~---------~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~ 190 (319)
+..+++... ..+++|++.+..|++.. ..+...+.+.. .++..+ ..|++.+++.+.++..+|++.
T Consensus 97 ~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~dl~~l~~~l~~~~a~vi~e 172 (375)
T PRK04260 97 NEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI----FNDLNSVKALVNKNTAAVMLE 172 (375)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC----CCCHHHHHHhcCCCeEEEEEC
Confidence 998887753 34578888888887532 23222222110 011000 138899999887777888889
Q ss_pred CCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968 191 NPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (319)
Q Consensus 191 ~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~ 269 (319)
.++|++|.+. +.+.++++.++|+++|+++|+||+|.++...+... ........+. +.||||.+ .+|+|+||+++
T Consensus 173 ~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l-~~G~~ig~~~~ 247 (375)
T PRK04260 173 LVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGL-ANGVPVGAMLA 247 (375)
T ss_pred CeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEecccc-cCCcceEEEEE
Confidence 9999999865 45679999999999999999999998876554321 2112222222 33899996 47999999999
Q ss_pred eCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968 270 SDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
++ ++.+.+..... .+...+++.|.++...+
T Consensus 248 ~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~a~l 278 (375)
T PRK04260 248 KS--------SLGGAFGYGSHGSTFGGNKLSMAAASATL 278 (375)
T ss_pred cH--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHH
Confidence 64 45665543222 23455788888777754
No 238
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.70 E-value=2.5e-15 Score=135.25 Aligned_cols=195 Identities=23% Similarity=0.299 Sum_probs=153.2
Q ss_pred CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHh-cCCCCEEEEcC
Q 020968 63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVL-ARPGANILLPR 141 (319)
Q Consensus 63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l-~~~gd~Vl~~~ 141 (319)
......+++.+.+.++.+.. ++ -..+|++++++|+ .....+.++++|.|+.++++++ .++||.|++++
T Consensus 13 i~~~e~~~v~~vl~sg~i~~-G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps 81 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTG-GP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPS 81 (374)
T ss_pred cchHHHHHHHHHHHcCCeec-Ch--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence 34677788888888876533 43 4689999999999 5678999999999999999966 58999999999
Q ss_pred CCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEE
Q 020968 142 PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 142 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (319)
-+|..........|++++++++++ +.+.+|++.+|+++.+++++|+.++- .|.. .++++|.++|++||++||+
T Consensus 82 ~TfvATan~i~~~Ga~PVFvDid~-~T~nid~~~ie~aIt~~tKAIipVhl---~G~~---~dm~~i~~la~~~~l~vIE 154 (374)
T COG0399 82 FTFVATANAVLLVGAKPVFVDIDP-DTLNIDPDLIEAAITPRTKAIIPVHL---AGQP---CDMDAIMALAKRHGLPVIE 154 (374)
T ss_pred CchHHHHHHHHHcCCeEEEEecCC-cccCCCHHHHHHHcccCCeEEEEehh---ccCC---CCHHHHHHHHHHcCCeEEE
Confidence 999999999999999999999976 45689999999999999999998875 2333 4689999999999999999
Q ss_pred eCCCCCcc-CCCCCCCCCcccCCCCCeEEEecC--ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968 222 DEVYDHLA-FGNTPFVPMGVFGSIVPVLTLGSI--SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 222 D~a~~~~~-~~~~~~~~~~~~~~~~~vi~~~s~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 291 (319)
|.+++... +.|+. +..+.+ +-+.|| +|.+.. | --|.++..+ +++.++++.++..
T Consensus 155 DaAqa~Ga~y~gk~---vGt~Gd----~~~fSF~~~K~itt-g-EGGav~tnd-------~ela~k~~~lr~h 211 (374)
T COG0399 155 DAAQAHGATYKGKK---VGSFGD----IGAFSFHATKNLTT-G-EGGAVVTND-------EELAEKARSLRNH 211 (374)
T ss_pred EcchhccCeecCcc---cccccc----eEEEEecCCCCccc-c-CceEEEeCC-------HHHHHHHHHHHHh
Confidence 99998643 34433 223332 444555 566433 3 558888765 4688888876653
No 239
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.70 E-value=1.2e-15 Score=142.72 Aligned_cols=247 Identities=14% Similarity=0.123 Sum_probs=152.5
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|....... --+|.+.+++.+++..... .+.+..+.+. ...+++++....+... .+.+++++++++|
T Consensus 39 dG~~~lD~~~g~~~~~lG-h~~~~i~~a~~~~~~~~~~-~~~~~~~~~~-~~~la~~l~~~~~~~~-~~~~~f~~sGsea 114 (425)
T PRK08088 39 EGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLKKLSH-TCFQVLAYEP-YLELCEKMNQKVPGDF-AKKTLLVTTGSEA 114 (425)
T ss_pred CCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHhhCCC-ccccccCCHH-HHHHHHHHHHhCCCCC-CCEEEEeCCcHHH
Confidence 366788887775432111 2378888999998876432 2222222333 3467777766444322 2467777777787
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEE--------------E--EeccCCCCCcC--CHHHHHhhhc-
Q 020968 123 IEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVR--------------H--FDLLPAKGWEV--DLDAVEALAD- 181 (319)
Q Consensus 123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~--------------~--~~~~~~~~~~~--d~~~l~~~l~- 181 (319)
+..+++... ....+|+..+++|++....+...+.... . ++.. ..+... +++.+++.+.
T Consensus 115 ~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~l~~ 193 (425)
T PRK08088 115 VENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCP-LHGVSEDDAIASIERIFKN 193 (425)
T ss_pred HHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcc-ccCccHHHHHHHHHHHHHh
Confidence 777766542 1235677779999886554444332111 0 1110 011111 1456777764
Q ss_pred ----cCceEEEEcCC-CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968 182 ----ENTVALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (319)
Q Consensus 182 ----~~~~~v~l~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~ 256 (319)
++..++++... +++.+...+.+.+++|.++|+++|+++|+||+|.++.+.+.. ..+... +.+..+.||||.
T Consensus 194 ~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~-~~~~~~---~~~pdi~s~sK~ 269 (425)
T PRK08088 194 DAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTL-FAMEQM---GVAADLTTFAKS 269 (425)
T ss_pred ccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hHHhhc---CCCCCEEEEecc
Confidence 23344444432 677777889999999999999999999999999987654421 111111 223447899999
Q ss_pred cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
++ +|+|+||++++. ++++.+..... .+...+++.|.++...+
T Consensus 270 l~-~G~rig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~~~l 312 (425)
T PRK08088 270 IA-GGFPLAGVTGRA--------EVMDAIAPGGLGGTYAGNPIACAAALAVL 312 (425)
T ss_pred cc-CCCcceeeEecH--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHH
Confidence 75 999999999864 46776654433 34567889998888854
No 240
>PRK04311 selenocysteine synthase; Provisional
Probab=99.70 E-value=6.2e-15 Score=137.82 Aligned_cols=200 Identities=17% Similarity=0.155 Sum_probs=140.1
Q ss_pred CCCcHHHHHHHHHHhhcCCCCCCCCC---cC--CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 020968 61 FRTASVAVDAIVHSVRSARFNCYSST---VG--ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA 135 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~---~g--~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd 135 (319)
.+.++.+.+++.+.+.......|.-. .| +..+++.+++++ +.+..+++++++.|+.+++.++ .+||
T Consensus 96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--------Gae~a~vv~sgtaAl~l~l~~l-~~Gd 166 (464)
T PRK04311 96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--------GAEDALVVNNNAAAVLLALNAL-AAGK 166 (464)
T ss_pred CCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHh-CCCC
Confidence 46789999999888765422222211 11 357788888877 3456888899999999988665 7999
Q ss_pred EEEEcCCCCcc------hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc--cc--cccCHHHH
Q 020968 136 NILLPRPGFPY------YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP--CG--NVYTYQHL 205 (319)
Q Consensus 136 ~Vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np--tG--~~~~~~~l 205 (319)
+|+++...+.. ....++..|++++.++... ..++++++++++++++++++++++|| +| .. .++
T Consensus 167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~---~dl 239 (464)
T PRK04311 167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTKE---VSL 239 (464)
T ss_pred EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCCc---CCH
Confidence 99998764431 2345678899998887532 24789999999999999999999998 34 34 359
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCcc----CCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHH
Q 020968 206 QKIAETAKKLGIMVIADEVYDHLA----FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGI 281 (319)
Q Consensus 206 ~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~ 281 (319)
++|+++|+++|+++++|.+.+.+. ++-...+.+......+-.++++|.+|.++.| ..|++++.+ ++
T Consensus 240 ~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~--------~l 309 (464)
T PRK04311 240 AELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKK--------EL 309 (464)
T ss_pred HHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcH--------HH
Confidence 999999999999999999755432 1100111222211123349999999997666 589888743 46
Q ss_pred HHHHH
Q 020968 282 VDSIK 286 (319)
Q Consensus 282 ~~~~~ 286 (319)
+++++
T Consensus 310 i~~l~ 314 (464)
T PRK04311 310 IARLK 314 (464)
T ss_pred HHHHh
Confidence 66665
No 241
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.70 E-value=2.6e-15 Score=137.33 Aligned_cols=184 Identities=24% Similarity=0.293 Sum_probs=132.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~ 163 (319)
....|++.++++. ..+.++++++|+.|+..++.+++++||+|+++...|.+....+ ...|+++..++.
T Consensus 56 t~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~ 127 (386)
T PF01053_consen 56 TVRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP 127 (386)
T ss_dssp HHHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST
T ss_pred cHHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc
Confidence 3467777887776 3578999999999999999999999999999999998765544 457999887764
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcC-CEEEEeCCCCCccCCCCCCCCCcccC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG-IMVIADEVYDHLAFGNTPFVPMGVFG 242 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~D~a~~~~~~~~~~~~~~~~~~ 242 (319)
-|++++++++++++++|++..|.||+..+ .++++|+++|+++| +++++|+++.....- .++ .+.
T Consensus 128 -------~d~~~l~~~l~~~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~----~pL-~~G 192 (386)
T PF01053_consen 128 -------TDLEALEAALRPNTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFATPYNQ----NPL-ELG 192 (386)
T ss_dssp -------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC-----GG-GGT
T ss_pred -------hhHHHHHhhccccceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeeccccceeee----ccC-cCC
Confidence 38999999999999999999999999888 56999999999998 999999999863211 122 122
Q ss_pred CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHH
Q 020968 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFL 302 (319)
Q Consensus 243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~ 302 (319)
-.|++.|.+|.++..|--+|-+++.+. .+++.++++..... ....++...+.
T Consensus 193 ---aDivv~S~TKyl~Ghsdv~~G~vv~~~-----~~~~~~~l~~~~~~~G~~~~p~da~l 245 (386)
T PF01053_consen 193 ---ADIVVHSATKYLSGHSDVMGGAVVVNG-----SSELYDRLREFRRLLGATLSPFDAWL 245 (386)
T ss_dssp ----SEEEEETTTTTTTSSSE-EEEEEESS-----HHHHHHHHHHHHHHHT-B--HHHHHH
T ss_pred ---ceEEEeeccccccCCcceeeEEEEECc-----hhhhhhhhcchhhhcCccchHHHHHH
Confidence 239999999998877666555554332 13577777665543 33344444443
No 242
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.69 E-value=4.7e-15 Score=137.33 Aligned_cols=202 Identities=14% Similarity=0.166 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH-HHHHHHHHHhcC---CCCEEEEcCCCCcchHHHHhhCCCeEEEEec-c
Q 020968 90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCT-QAIEVILTVLAR---PGANILLPRPGFPYYEARATHSHLEVRHFDL-L 164 (319)
Q Consensus 90 ~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t-~ai~~~~~~l~~---~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~ 164 (319)
..+.+.+.+.+.+..|.. +.+..++++|+| .++.+++.++.. +|+.|+++.-+|.+..+.+...|++++.++. .
T Consensus 104 ~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~ 182 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVL 182 (444)
T ss_pred HHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeee
Confidence 444455555444444432 124688999999 688888877652 5899999999999999999999999999996 3
Q ss_pred CCCCCcCCHHHHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCC--c
Q 020968 165 PAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPM--G 239 (319)
Q Consensus 165 ~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~ 239 (319)
++++|.+|++++++++++ +..++++.+|+ |+......++++|.++|+++|+++|+|++|+..... ...+ .
T Consensus 183 d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~---~~~~~~~ 257 (444)
T TIGR03531 183 DGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK---YMELINK 257 (444)
T ss_pred cCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh---hhhhhhc
Confidence 456789999999999975 44566666665 343334488999999999999999999999963211 0011 1
Q ss_pred ccCCCCCeEEEecCccccCCCcceeeEEE-eeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968 240 VFGSIVPVLTLGSISKRWIVPGWRLGWLV-TSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 240 ~~~~~~~vi~~~s~sK~~~~~G~r~G~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 307 (319)
......-.+++.|++|.+.+||+ |+++ +.+ +++.+++...... ...+.+.|.+...++
T Consensus 258 g~~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d-------~el~~~i~~~y~g-~~~~s~~~~~~~~ll 316 (444)
T TIGR03531 258 AIKVGRVDAVVSSTDKNFMVPVG--GAIIYSFD-------ENFIQEISKSYPG-RASASPSLDVLITLL 316 (444)
T ss_pred cccccCCCeEEEeCccCCCCCCC--EEEEEECC-------HHHHHHHHHhccC-CCCChHHHHHHHHHH
Confidence 11110114778899999988876 6655 434 3577766654321 223456666655533
No 243
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.66 E-value=5.8e-15 Score=137.40 Aligned_cols=196 Identities=15% Similarity=0.176 Sum_probs=134.9
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC---C-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR---F-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~---~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
++++.|+++.-+ ++|+.+.+++.+.+.... . ..+....+...+.+.+.+ + +.. +.++++|++++|+|
T Consensus 26 ~~~iyld~~a~g-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~--g~~~~~v~~~~~~t 96 (406)
T TIGR01814 26 NAVIYLDGNSLG-----LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLV--GAKEDEVVVMNTLT 96 (406)
T ss_pred CCcEEecCCCcC-----cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-ccc--CCCCCcEEEeCCch
Confidence 678999988844 447888888877654311 0 111100121222222222 1 223 35788999999999
Q ss_pred HHHHHHHHHhcCCC---CEEEEcCCCCcch----HHHHhhCCCeE----EEEeccCCCCCcCCHHHHHhhhc---cCceE
Q 020968 121 QAIEVILTVLARPG---ANILLPRPGFPYY----EARATHSHLEV----RHFDLLPAKGWEVDLDAVEALAD---ENTVA 186 (319)
Q Consensus 121 ~ai~~~~~~l~~~g---d~Vl~~~p~~~~~----~~~~~~~g~~~----~~~~~~~~~~~~~d~~~l~~~l~---~~~~~ 186 (319)
++++.++.++.++| +.|++....|+.. ...++..|+++ +.++. ..++.+|++.+++.++ +++++
T Consensus 97 ~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~t~l 174 (406)
T TIGR01814 97 INLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIEKNGDDIAV 174 (406)
T ss_pred HHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHHhcCCCeEE
Confidence 99999999986554 3688888999763 23446678876 34443 3345678999988773 67889
Q ss_pred EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccC-CCc
Q 020968 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWI-VPG 261 (319)
Q Consensus 187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~-~~G 261 (319)
|++++++|.||.+.+ +++|.++|+++|+++++|++++. |..+..+.... -.+++.|.+|+++ .||
T Consensus 175 v~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~g---vD~~~~s~hK~l~g~pG 240 (406)
T TIGR01814 175 ILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV----GNVPLDLHDWG---VDFACWCTYKYLNAGPG 240 (406)
T ss_pred EEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc----CCcccccccCC---CCEEEEcCccccCCCCC
Confidence 999999999999976 89999999999999999999987 33333333332 2489999999864 455
No 244
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.66 E-value=2.5e-14 Score=133.45 Aligned_cols=193 Identities=15% Similarity=0.088 Sum_probs=135.1
Q ss_pred CCCcHHHHHHHHHHhhcCCCCCCCCC-----cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCC
Q 020968 61 FRTASVAVDAIVHSVRSARFNCYSST-----VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGA 135 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-----~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd 135 (319)
.+.++.+.+++.+.+.......|.-. .-+..+++.+++++ +.+..+++++++.|+.+++.+ +.+||
T Consensus 91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~--------gae~alvv~sg~aAi~l~l~~-l~~Gd 161 (454)
T TIGR00474 91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT--------GAEDALVVNNNAAAVLLALNT-LAKGK 161 (454)
T ss_pred CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHH-hCCcC
Confidence 36689999999888765322123211 11367888888887 234467788888999988855 57999
Q ss_pred EEEEcCCCCcc------hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc--cc--ccCHHHH
Q 020968 136 NILLPRPGFPY------YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC--GN--VYTYQHL 205 (319)
Q Consensus 136 ~Vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt--G~--~~~~~~l 205 (319)
+|+++...|.. +...++..|++++.++.+. ..++++++++++++++++++.+++|++ |. + .++
T Consensus 162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~---~dl 234 (454)
T TIGR00474 162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEE---VSI 234 (454)
T ss_pred EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCC---CCH
Confidence 99999876532 2345677899998887532 247899999999999999999999985 53 4 349
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCccCCC---C-CCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 206 QKIAETAKKLGIMVIADEVYDHLAFGN---T-PFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 206 ~~i~~~~~~~~~~li~D~a~~~~~~~~---~-~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
++|+++|+++|+++++|.+.+.+...+ - ..+.+......+-.++++|.+|+++.| ..|++++.+
T Consensus 235 ~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~ 302 (454)
T TIGR00474 235 AELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKK 302 (454)
T ss_pred HHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECH
Confidence 999999999999999998755432110 0 111112222222349999999997666 479888753
No 245
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.66 E-value=9.1e-17 Score=139.47 Aligned_cols=224 Identities=16% Similarity=0.148 Sum_probs=135.5
Q ss_pred EeccCCCCCCCCCCCCcHHHHHHHHHH----hhcCCCCCCCC-----CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 48 IPLGHGDPSAFPSFRTASVAVDAIVHS----VRSARFNCYSS-----TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~~~~a~~~~----~~~~~~~~Y~~-----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
+|+++|||..+ +......... +.....+.|.. ..-.++|.+.|.++.....|...+...|++++|
T Consensus 1 ~d~d~GDP~~~------E~yW~~~~~~~avvi~gw~rMSY~~~~~~~~f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtG 74 (363)
T PF04864_consen 1 ADADSGDPTFF------EPYWRRHGDSSAVVIPGWHRMSYFSDSSNGWFISPELERQIRRLHRVVGNAVTDGRYIVFGTG 74 (363)
T ss_dssp EEESS---GGG------HHHHCCTHHHH-EEE-TTTT-SSSS-TTSSTTS-HHHHHHHHHHHHHH-SB--TTSEEEEECH
T ss_pred CCcCCCCchhh------HHHHHhcCcceeEEEeccccceeEEecCCceeccHHHHHHHHHHHHHhccccccCcEEEEcCC
Confidence 57889998742 2222211111 12223345544 123579999999999888888888889999999
Q ss_pred HHHHHHHHHHHhcCC----C--CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968 119 CTQAIEVILTVLARP----G--ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (319)
Q Consensus 119 ~t~ai~~~~~~l~~~----g--d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 192 (319)
+|+.+++++.+|... + -+|+...|.|+.|........-....+.-+. ..|. ..-...+-+-++++|
T Consensus 75 sTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gda-~~~~-------~~~~~~~~IElVTSP 146 (363)
T PF04864_consen 75 STQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGDA-SNFK-------NSDNPSPYIELVTSP 146 (363)
T ss_dssp HHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEEC-CCGT-------T-S-CCGEEEEEESS
T ss_pred HHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccccccH-Hhhc-------cCCCCCCeEEEEeCC
Confidence 999999999999533 1 4889999999999988776655444444332 1221 111124566789999
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~ 272 (319)
|||.|.+ .+.++ +..+..+|.|-+|.+=.|+ ++.... +..|.++++||.-|-+|-|+||.++.|+
T Consensus 147 NNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyT-----pI~~~a--D~DiMLFT~SK~TGHAGSR~GWAlVKD~ 211 (363)
T PF04864_consen 147 NNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYT-----PITAPA--DHDIMLFTLSKLTGHAGSRFGWALVKDE 211 (363)
T ss_dssp -TTT-----------SS---TTTEEEEEEE-TT-STTTS--------S-B----SEEEEEHHHHCS-GGG-EEEEEES-H
T ss_pred CCCcccc-----cchhc---CCCCcceeeeeeeeccccc-----ccCCCC--CCceEEEEEecccCccccccceeeecCH
Confidence 9999998 55554 4456778999999984433 333322 3349999999999999999999999874
Q ss_pred CCCccchHHHHHHHHhhhh-cCCcchHHHHHHHHHH
Q 020968 273 NGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSSRK 307 (319)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l 307 (319)
++.++|..+..+ +.++|.-+|..+++++
T Consensus 212 -------~Va~kM~~y~~lnTiGvS~dsQLRa~kiL 240 (363)
T PF04864_consen 212 -------EVAKKMTKYMELNTIGVSRDSQLRALKIL 240 (363)
T ss_dssp -------HHHHHHHHHHHHHCSS--HHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 588999998875 7899999999998854
No 246
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.66 E-value=4.2e-15 Score=138.95 Aligned_cols=241 Identities=15% Similarity=0.092 Sum_probs=152.5
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
++..++||..|.+..+-. ..+|.+.+++.+++.... ..|.+..+..+|.+.+++.+ . ..+.+++++++++|
T Consensus 48 dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGseA 118 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTEA 118 (426)
T ss_pred CCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHHH
Confidence 477899999886543222 367899999999987643 23444444445555555543 1 35689999999999
Q ss_pred HHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhC-CCe-------E---EEEeccCCCCC---cCCHHHHHhhhcc---C
Q 020968 123 IEVILTVLAR--PGANILLPRPGFPYYEARATHS-HLE-------V---RHFDLLPAKGW---EVDLDAVEALADE---N 183 (319)
Q Consensus 123 i~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~-g~~-------~---~~~~~~~~~~~---~~d~~~l~~~l~~---~ 183 (319)
+..+++.... .+++|+..++.|+++...+... |.. . ...+.. ...+ ..|++.+++.+.. +
T Consensus 119 ~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~~~~~ 197 (426)
T PRK00062 119 TMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFA-KHTLTAPYNDLEAVEELFEEYGDE 197 (426)
T ss_pred HHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccc-cceEEcCCCCHHHHHHHHHhCCCc
Confidence 9999987543 3578999999998865322211 100 0 000000 0000 1378888887742 4
Q ss_pred ceEEEEcCCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc
Q 020968 184 TVALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (319)
Q Consensus 184 ~~~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~ 262 (319)
+.+|++......+|.+.+ .+.+++|.++|++||+++|+||+|.++.+++ . .....+.-.+. +.+++|.++ .|+
T Consensus 198 ~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~-~-~~~~~~~~~pD---i~~~gK~l~-~G~ 271 (426)
T PRK00062 198 IAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL-G-GAQGYYGVTPD---LTTLGKIIG-GGL 271 (426)
T ss_pred EEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC-c-cHHHHhCCCcc---hHhhhhHhh-CCC
Confidence 556666634445787775 7779999999999999999999999874332 1 11111211111 358899986 789
Q ss_pred eeeEEEeeCCCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH
Q 020968 263 RLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 263 r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l 307 (319)
++|+++++. ++++.+... ...+.+.+++.+.++..++
T Consensus 272 p~ga~~~~~--------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L 312 (426)
T PRK00062 272 PVGAFGGRR--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATL 312 (426)
T ss_pred cceeeeEHH--------HHHHhhccCCCceecccCcCCHHHHHHHHHHH
Confidence 999998753 466666421 1123456778877766654
No 247
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.65 E-value=1.2e-14 Score=130.08 Aligned_cols=184 Identities=21% Similarity=0.171 Sum_probs=144.2
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA----THSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~ 163 (319)
....+.+.+++.. ...+.++.+++..|+..++..++..|++|++....|......+ ...|++...++.
T Consensus 78 t~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 78 TRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred chHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 4567777777776 4556899999999999999999999999999999998765444 467777777765
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 243 (319)
+ +++++++++++++++|++.+|.||+..+ .+++++.++|+++|+++++|++++...+- .+.+ +.
T Consensus 150 ~-------~~~~~~~~i~~~t~~V~~ESPsNPll~v---~DI~~l~~la~~~g~~vvVDnTf~~p~~~--~pL~---lG- 213 (409)
T KOG0053|consen 150 D-------DLKKILKAIKENTKAVFLESPSNPLLKV---PDIEKLARLAHKYGFLVVVDNTFGSPYNQ--DPLP---LG- 213 (409)
T ss_pred h-------hHHHHHHhhccCceEEEEECCCCCcccc---ccHHHHHHHHhhCCCEEEEeCCcCccccc--Chhh---cC-
Confidence 3 7788899999899999999999999999 56999999999999999999999975321 1112 22
Q ss_pred CCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHH
Q 020968 244 IVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLK 303 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~ 303 (319)
-.|++.|.+|.++..+--+|-+++.+ .+++.++++..+. +.+..+++....+
T Consensus 214 --ADIV~hSaTKyi~Ghsdvi~G~iv~n------~~~~~~~l~~~~~~lg~~~~p~~~~ll 266 (409)
T KOG0053|consen 214 --ADIVVHSATKYIGGHSDVIGGSVVLN------SEELASRLKFLQEDLGWCEDPFDLFLL 266 (409)
T ss_pred --CCEEEEeeeeeecCCcceeeeEEecC------cHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 23999999999999877777766654 2468888887775 4556666655443
No 248
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.65 E-value=2.5e-14 Score=131.06 Aligned_cols=202 Identities=16% Similarity=0.139 Sum_probs=145.9
Q ss_pred HHHHHH-HHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 020968 65 SVAVDA-IVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPG 143 (319)
Q Consensus 65 ~~~~~a-~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~ 143 (319)
.++.++ +......+. .|..++.+.+|++++++++ ..+.++.+++++.|++++....+++||.| +.+.
T Consensus 50 ~aMs~~q~a~~~~GDe--~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~ 117 (450)
T TIGR02618 50 NAMSDKQWAGLMMGDE--AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNM 117 (450)
T ss_pred HHHHHHHHHHhhhcch--hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCce
Confidence 566666 666655554 4888888999999999999 56789999999999998877778999977 6677
Q ss_pred Ccc-hHHHHhhCCCeEEEEecc--------CCCCCcCCHHHHHhhhcc----CceEEEEcCCCCc-cccccCHHHHHHHH
Q 020968 144 FPY-YEARATHSHLEVRHFDLL--------PAKGWEVDLDAVEALADE----NTVALVIINPGNP-CGNVYTYQHLQKIA 209 (319)
Q Consensus 144 ~~~-~~~~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~np-tG~~~~~~~l~~i~ 209 (319)
|.. +.......|..++.+..+ ....+.+|++++++++++ +++++++.+++|- .|.++|.++++++.
T Consensus 118 ~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~ 197 (450)
T TIGR02618 118 YFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVR 197 (450)
T ss_pred eHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHH
Confidence 744 444467788865555333 123468899999999875 3457888888875 58999999999999
Q ss_pred HHHHHcCCEEEEeCCCCC-c-cC-----CCCCCCCC----cccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCcc
Q 020968 210 ETAKKLGIMVIADEVYDH-L-AF-----GNTPFVPM----GVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQ 277 (319)
Q Consensus 210 ~~~~~~~~~li~D~a~~~-~-~~-----~~~~~~~~----~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~ 277 (319)
++|+++|+.+++|.+... . .+ .+....++ ..+... -..+..|..|.+++| | |+++..+
T Consensus 198 elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~-aD~~~~S~~Kd~~~~~G---G~l~~~d------ 267 (450)
T TIGR02618 198 ELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSY-ADGCTMSGKKDCLVNIG---GFLCMND------ 267 (450)
T ss_pred HHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhcc-CcEEEEeeccCCCCCCc---eEEEeCC------
Confidence 999999999999998875 1 11 01111122 111111 125888999998777 4 6666555
Q ss_pred chHHHHHHHHhh
Q 020968 278 DSGIVDSIKSFL 289 (319)
Q Consensus 278 ~~~~~~~~~~~~ 289 (319)
+++.++++..+
T Consensus 268 -~~l~~k~r~~~ 278 (450)
T TIGR02618 268 -DEMFQSAKELV 278 (450)
T ss_pred -HHHHHHHHHHh
Confidence 35888887764
No 249
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=9.6e-15 Score=136.05 Aligned_cols=158 Identities=20% Similarity=0.205 Sum_probs=122.1
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEec
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDL 163 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~ 163 (319)
....+++.++++++ .+..+++++++.|+.+++.++.++||+|+++...|.+.. ..+...|+++..++
T Consensus 70 t~~~le~~la~l~g--------~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 70 TVEALENRIASLEG--------GVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred HHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 35677888888772 245566666668888888888899999999999998753 44577899988887
Q ss_pred cCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968 164 LPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 243 (319)
++ .|++.+++++++++++|++.++.||+|.+.+ +++|.++|+++|+++|+|.++..... ..++ .+.
T Consensus 141 ~~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~----~~p~-~~G- 206 (437)
T PRK05613 141 NP-----DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL----VRPL-ELG- 206 (437)
T ss_pred CC-----CCHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc----cChH-HhC-
Confidence 22 2889999999989999999999999998855 99999999999999999999865221 1111 122
Q ss_pred CCCeEEEecCccccCCCcceeeEEEee
Q 020968 244 IVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
-.+++.|++|.++..|..+|.+++.
T Consensus 207 --aDivv~S~~K~l~G~gd~~gG~vv~ 231 (437)
T PRK05613 207 --ADVVVASLTKFYTGNGSGLGGVLID 231 (437)
T ss_pred --CCEEEeeccceecCCCcceeEEEEe
Confidence 2499999999988888777776663
No 250
>PLN00144 acetylornithine transaminase
Probab=99.64 E-value=1.4e-14 Score=133.49 Aligned_cols=253 Identities=15% Similarity=0.115 Sum_probs=154.1
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|--...- ---.|.+.+++.+++..... +.. ....+....+++.+.+.. ..+.+++++++++|
T Consensus 13 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGseA 84 (382)
T PLN00144 13 EGKEYLDMAAGIAVNAL-GHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTEA 84 (382)
T ss_pred CCCEEEECCcCHHhccC-CCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHHH
Confidence 46778888766311101 12358899999998875321 111 122344455666665422 24689999999999
Q ss_pred HHHHHHHhc---C-C-----------CCEEEEcCCCCcchHHHHhhCCCeE-E---EEeccCCCCC--cCCHHHHHhhhc
Q 020968 123 IEVILTVLA---R-P-----------GANILLPRPGFPYYEARATHSHLEV-R---HFDLLPAKGW--EVDLDAVEALAD 181 (319)
Q Consensus 123 i~~~~~~l~---~-~-----------gd~Vl~~~p~~~~~~~~~~~~g~~~-~---~~~~~~~~~~--~~d~~~l~~~l~ 181 (319)
+..+++... . . ..+|+....+|++....+....-.. . ..+..+.-.+ -.|++.+++.+.
T Consensus 85 ~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 164 (382)
T PLN00144 85 NEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQ 164 (382)
T ss_pred HHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcC
Confidence 999988542 1 0 2578888888877543333221110 0 0000000000 127889988875
Q ss_pred c-CceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC-CcccCCCCCeEEEecCccccC
Q 020968 182 E-NTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISKRWI 258 (319)
Q Consensus 182 ~-~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~~~~vi~~~s~sK~~~ 258 (319)
. ++++|++.-.+||.|.. .+..-++++.++|+++|+++|+||+|.++...+..+.. ...+.++ +.+|||.+
T Consensus 165 ~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l- 238 (382)
T PLN00144 165 KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL- 238 (382)
T ss_pred CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc-
Confidence 4 45555555447884443 23444999999999999999999999998776643221 3333332 66899995
Q ss_pred CCcceeeEEEeeCCCCCccchHHHHHHHHh-hhhcCCcchHHHHHHHHH--Hhccccccccc
Q 020968 259 VPGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQFLKSSR--KLKRNSFLKSL 317 (319)
Q Consensus 259 ~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~--l~~~~~~~~~l 317 (319)
.+|+|+||++++. ++.+.+... ...+...+++.+.++... +++++++.+++
T Consensus 239 ~~G~pig~v~~~~--------~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~ 292 (382)
T PLN00144 239 AGGLPIGAVLVTE--------KVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASV 292 (382)
T ss_pred cCCcceEEEEEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHH
Confidence 6899999999964 466655432 223456788888877733 34555555543
No 251
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.64 E-value=4.3e-14 Score=131.12 Aligned_cols=245 Identities=15% Similarity=0.115 Sum_probs=155.1
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|.-.... ---.|.+.+++.+++.... .++.. ...+....+++.+....+ ..+.+++++++++|
T Consensus 38 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGseA 110 (408)
T PRK04612 38 QGREYLDLAAGIAVCGL-GHNDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTEA 110 (408)
T ss_pred CCCEEEEcCccHhhccC-CCCCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHHH
Confidence 46778888777422111 1346888899998887532 22221 223444556666654322 13689999999999
Q ss_pred HHHHHHHhcC----C-----CCEEEEcCCCCcchHHHHh-hCCCeEEE--EeccCCC-C--CcCCHHHHHhhhccCceEE
Q 020968 123 IEVILTVLAR----P-----GANILLPRPGFPYYEARAT-HSHLEVRH--FDLLPAK-G--WEVDLDAVEALADENTVAL 187 (319)
Q Consensus 123 i~~~~~~l~~----~-----gd~Vl~~~p~~~~~~~~~~-~~g~~~~~--~~~~~~~-~--~~~d~~~l~~~l~~~~~~v 187 (319)
+..+++.... . ..+|+....+|++....+. ..+..... +...+.+ . --.|++.+++.+..+..++
T Consensus 111 ~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aa 190 (408)
T PRK04612 111 NEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAA 190 (408)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEE
Confidence 9999876431 1 2468888888877543332 22211100 0000000 0 0127888888887666777
Q ss_pred EEcCCCCccccccC--HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceee
Q 020968 188 VIINPGNPCGNVYT--YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG 265 (319)
Q Consensus 188 ~l~~p~nptG~~~~--~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G 265 (319)
++..|.+++|-+++ .+.++++.++|+++|+++|+||+|.++...+... .....+.+..+.+++|.++ +|+|+|
T Consensus 191 vi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~----a~~~~~~~pdi~t~~K~l~-~G~pig 265 (408)
T PRK04612 191 VMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF----AHWQEQVTPDIVTLAKALG-GGFPIG 265 (408)
T ss_pred EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh----hhhhcCCCCCEEEEcchhc-CCCceE
Confidence 88888887775554 5689999999999999999999999876655321 1112233466789999975 899999
Q ss_pred EEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968 266 WLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK 307 (319)
Q Consensus 266 ~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l 307 (319)
|+++++ ++.+.+.... ..+.+.+++.+.++...+
T Consensus 266 a~~~~~--------~~~~~~~~~~~~~t~~~~p~~~aaa~a~L 300 (408)
T PRK04612 266 AMLAGP--------KVAETMQFGAHGTTFGGNPLAAAVARVAL 300 (408)
T ss_pred EEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHH
Confidence 999853 3555554322 233456788888877755
No 252
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.63 E-value=7.1e-15 Score=128.67 Aligned_cols=214 Identities=16% Similarity=0.171 Sum_probs=152.0
Q ss_pred EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHH
Q 020968 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVIL 127 (319)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~ 127 (319)
++|.+.+. ..+.|++.+++.+.-.. ....|+.++....+.+.+++.+ ....+++++++|+++.+++
T Consensus 2 ~~f~SDn~-----~g~~~~m~eam~~a~~~-~~~~YG~D~~~~~~e~~~ae~~--------g~~a~~Fv~sGT~aN~lal 67 (342)
T COG2008 2 IDFRSDNV-----AGPTPEMREALAAANAV-GDDVYGEDPTTNALEQRIAELF--------GKEAALFVPSGTQANQLAL 67 (342)
T ss_pred CccccCcc-----CCCCHHHHHHHHhcccc-CCCCCCCCHHHHHHHHHHHHHh--------CCceEEEecCccHHHHHHH
Confidence 34555543 37789999999887532 2346888777777777777776 3488999999999999999
Q ss_pred HHhcCCCCEEEEcCCCCcchH--HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccc
Q 020968 128 TVLARPGANILLPRPGFPYYE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNV 199 (319)
Q Consensus 128 ~~l~~~gd~Vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~ 199 (319)
.+.+++|+.|++..-.|.... ......+ ...++++.+..+..+++++++..+.. .++++++.+.+|..|.+
T Consensus 68 ~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtV 146 (342)
T COG2008 68 AAHCQPGESVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTV 146 (342)
T ss_pred HHhcCCCCeEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCcee
Confidence 999999999999988885421 2223333 12334444555668999999997652 34566666666688999
Q ss_pred cCHHHHHHHHHHHHHcCCEEEEeCCCCCc--cCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCcc
Q 020968 200 YTYQHLQKIAETAKKLGIMVIADEVYDHL--AFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQ 277 (319)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~--~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~ 277 (319)
||.+++++|.++|+++|+.|.+|.+-... ...+ ++...+...- .++..++||..+.|+ |.|++.|.
T Consensus 147 y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg---~~~~~~~~~~-D~v~~~~tK~g~~~~---gAiv~gn~----- 214 (342)
T COG2008 147 YPLDELEAISAVCKEHGLPLHMDGARLANALVALG---VALKTIKSYV-DSVSFCLTKGGGAPV---GAIVFGNR----- 214 (342)
T ss_pred cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC---CCHHHHHhhC-CEEEEecccCCccee---eeEEEcCH-----
Confidence 99999999999999999999999975542 2223 2333333222 266668999966664 99988764
Q ss_pred chHHHHHHHHhhh
Q 020968 278 DSGIVDSIKSFLN 290 (319)
Q Consensus 278 ~~~~~~~~~~~~~ 290 (319)
+++++++..+-
T Consensus 215 --~~~~~a~~~rK 225 (342)
T COG2008 215 --DFAKRARRWRK 225 (342)
T ss_pred --HHHHHHHHHHH
Confidence 48887776554
No 253
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.63 E-value=4.7e-15 Score=135.29 Aligned_cols=192 Identities=17% Similarity=0.214 Sum_probs=129.9
Q ss_pred CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (319)
Q Consensus 85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 164 (319)
|..-+.+..+..|+.+.. .+..++++|+|.++..++.+++++||+|+++..+|.+....+...|+.+++++..
T Consensus 64 p~G~I~eAe~~aA~~fGA-------d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~ 136 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGA-------DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE 136 (417)
T ss_dssp TBTHHHHHHHHHHHHHTE-------SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE
T ss_pred CccHHHHHHHHHHHhcCC-------CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC
Confidence 443456777778888732 4567889999999999999999999999999999999888999999999988875
Q ss_pred CCCCC----cCCH-----HHHHhhhcc--Cc---eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCc-c
Q 020968 165 PAKGW----EVDL-----DAVEALADE--NT---VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL-A 229 (319)
Q Consensus 165 ~~~~~----~~d~-----~~l~~~l~~--~~---~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~-~ 229 (319)
.+.+ .+++ +.++++++. .. +++++++|+. .|++++ +++|+++|+++++.|++||||+.. .
T Consensus 137 -~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~ 211 (417)
T PF01276_consen 137 -DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFG 211 (417)
T ss_dssp -E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGG
T ss_pred -ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEcccccccc
Confidence 3332 3455 888888864 22 3489999874 689855 999999999999999999999964 3
Q ss_pred CCCCCCCCCcccC----CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968 230 FGNTPFVPMGVFG----SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 230 ~~~~~~~~~~~~~----~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 291 (319)
|.. -+.+..... .+..++++.|.+|+ ++++.-+.++.-+.+......++.+.+..++++
T Consensus 212 F~~-lp~~a~~~gad~~~~~~~~vvqS~HKt--L~altQts~lh~~~~~~v~~~~~~~~l~~~~TT 274 (417)
T PF01276_consen 212 FHP-LPRSALALGADRPNDPGIIVVQSTHKT--LPALTQTSMLHVKGDRIVDHERVNEALSMHQTT 274 (417)
T ss_dssp CSG-GGTTCSSTTSS-CTSBEEEEEEEHHHH--SSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-S
T ss_pred CCC-CccchhhccCccccccceeeeechhhc--ccccccceEEEecCCCcccHHHHHHHHHHHcCC
Confidence 432 111111111 22457999999999 566666665544333213334455555555544
No 254
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.62 E-value=1.4e-13 Score=128.84 Aligned_cols=247 Identities=14% Similarity=0.110 Sum_probs=149.8
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
++..++||..|--...- ---.|.+.+++.+++..... +.......+.+..+++.+.+..+ ...+.+++++++++|
T Consensus 39 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsEA 113 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNV-GHNNPRVVKAIKEQTDKLIH--YTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSDA 113 (443)
T ss_pred CCCEEEEccccHhhccc-CCCCHHHHHHHHHHHHhccC--ccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHHH
Confidence 46778888777322111 13468899999998876322 22211223445556666655332 123689999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchH-HHHhhCCC------------eEEEEeccCCCC--Cc--------CCHHHHH
Q 020968 123 IEVILTVLA--RPGANILLPRPGFPYYE-ARATHSHL------------EVRHFDLLPAKG--WE--------VDLDAVE 177 (319)
Q Consensus 123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~-~~~~~~g~------------~~~~~~~~~~~~--~~--------~d~~~l~ 177 (319)
+..+++... ....+|+.....|++.. ......+. .+..++...... +. .+.+.++
T Consensus 114 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (443)
T PRK08360 114 NDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIK 193 (443)
T ss_pred HHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHH
Confidence 999988643 22357777777776643 22221221 122222211000 10 1234455
Q ss_pred hhhc-----cCceEEEEcCCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968 178 ALAD-----ENTVALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (319)
Q Consensus 178 ~~l~-----~~~~~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~ 251 (319)
+.+. +++++|++.-..||+|.+++ .+.++++.++|+++|+++|+||+|.++.+.+..+ ....+...+.++
T Consensus 194 ~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii--- 269 (443)
T PRK08360 194 EKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII--- 269 (443)
T ss_pred HHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE---
Confidence 5553 34566666544799999887 5569999999999999999999999987666422 222222223333
Q ss_pred cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK 307 (319)
Q Consensus 252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l 307 (319)
++||.++ +|+|+||++++. ++++.+.... ..+.+.+++.|.++..++
T Consensus 270 tlsK~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~l 317 (443)
T PRK08360 270 TLGKPLG-GGLPISATIGRA--------EIMDSLPPLAHAFTLSGNPVASAAALAVI 317 (443)
T ss_pred Eeccccc-CCceeEEEEEcH--------HHHhhhcCCCCCCCCCcCHHHHHHHHHHH
Confidence 6799986 899999999853 4666665432 234456777777766654
No 255
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.62 E-value=4.4e-14 Score=131.30 Aligned_cols=237 Identities=13% Similarity=0.078 Sum_probs=147.9
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC-CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
.+..++||..|.... ..--..|.+.+++.+.++..... .........++.+.+++++ ..+.+++++++++
T Consensus 35 ~g~~~lD~~s~~~~~-~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~ 105 (401)
T TIGR01885 35 EGKRYLDFLSAYSAV-NQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF--------GYDKVLPMNTGAE 105 (401)
T ss_pred CCCEEEEcccCHhhc-cCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc--------CCCEEEEeCccHH
Confidence 366788888764221 00123689999999887653211 1001122344555555544 2468999999999
Q ss_pred HHHHHHHHhc---------CC-CCEEEEcCCCCcch-HHHHhhCCC------------eEEEEeccCCCCCcCCHHHHHh
Q 020968 122 AIEVILTVLA---------RP-GANILLPRPGFPYY-EARATHSHL------------EVRHFDLLPAKGWEVDLDAVEA 178 (319)
Q Consensus 122 ai~~~~~~l~---------~~-gd~Vl~~~p~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~ 178 (319)
|+..+++... .+ .++|+...-+|... .......+. .+..++. .|++.+++
T Consensus 106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~ 178 (401)
T TIGR01885 106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEE 178 (401)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHH
Confidence 9999998752 12 36777777787653 333332221 1122211 27888888
Q ss_pred hhc---cCceEEEEcCCCCccccccCHH-HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCc
Q 020968 179 LAD---ENTVALVIINPGNPCGNVYTYQ-HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSIS 254 (319)
Q Consensus 179 ~l~---~~~~~v~l~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~s 254 (319)
.++ ++..+|++..+.+++|.+.+.+ .+++|.++|+++|+++|+||+|.++.+.|... ......-.+.++ +++
T Consensus 179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~g 254 (401)
T TIGR01885 179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LLG 254 (401)
T ss_pred HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---Eee
Confidence 775 3456777777799999988644 59999999999999999999998776555322 111111112233 367
Q ss_pred cccCCCcceeeEEEeeCCCCCccchHHHHHHHHh-hhhcCCcchHHHHHHHHHH
Q 020968 255 KRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 255 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l 307 (319)
|.++.+++|+|+++++. ++++.++.. ...+.+.+++.|.++..++
T Consensus 255 K~l~~g~~~ig~v~~~~--------~i~~~~~~~~~~~t~~~~p~~~~aa~a~L 300 (401)
T TIGR01885 255 KALSGGVYPVSAVLADD--------DVMLTIKPGEHGSTYGGNPLACAVAVAAL 300 (401)
T ss_pred ccccCCCCCcEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHH
Confidence 99987779999999853 466666532 2223345677777766654
No 256
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.62 E-value=7e-14 Score=126.68 Aligned_cols=185 Identities=21% Similarity=0.206 Sum_probs=136.6
Q ss_pred CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEE
Q 020968 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYE----ARATHSHLEVRHF 161 (319)
Q Consensus 86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~ 161 (319)
.+....|.+.++++- ..++.+.++++..||..++.+++++||+|+++...|.+.. .+.+..|+++.++
T Consensus 62 nPT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~ 133 (396)
T COG0626 62 NPTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFV 133 (396)
T ss_pred CccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEE
Confidence 345678888888887 5678999999999999999999999999999999997643 4456788888877
Q ss_pred eccCCCCCcCCHHHHHhhhc-cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968 162 DLLPAKGWEVDLDAVEALAD-ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240 (319)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 240 (319)
+. .+.+.+++++. +++++|++..|.||+..+ .++.+|+++|+++|+++++|++|..-.+.. ++ .
T Consensus 134 d~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~q~----PL-~ 198 (396)
T COG0626 134 DP-------GDDEALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVLQR----PL-E 198 (396)
T ss_pred CC-------CChHHHHHHhcccCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccccC----hh-h
Confidence 64 25556666666 589999999999999999 569999999999999999999999744321 11 1
Q ss_pred cCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh--hcCCcchHHHHH
Q 020968 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQFL 302 (319)
Q Consensus 241 ~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~ 302 (319)
+ +-.|++.|.+|.++..+--+|-++..+. +++.+.+..... +....+++..+.
T Consensus 199 ~---GaDIVvhSaTKyl~GHsDvl~G~v~~~~------~~~~~~~~~~~~~~~G~~l~p~dA~l 253 (396)
T COG0626 199 L---GADIVVHSATKYLGGHSDVLGGVVLTPN------EELYELLFFAQRANTGAVLSPFDAWL 253 (396)
T ss_pred c---CCCEEEEeccccccCCcceeeeEEecCh------HHHHHHHHHHHHhhcCCCCCHHHHHH
Confidence 2 2349999999999987666666554322 245555533222 333445555544
No 257
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.61 E-value=1.9e-15 Score=133.17 Aligned_cols=190 Identities=16% Similarity=0.156 Sum_probs=139.8
Q ss_pred CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC
Q 020968 63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRP 142 (319)
Q Consensus 63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p 142 (319)
+.|++.+++.+....+. .|+.+....+|++.+++.+ ..+..++++++|.+..+++++++++++.|++..+
T Consensus 7 ~~~~m~~a~~~a~~gd~--~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~ 76 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDD--AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPGESVICADT 76 (290)
T ss_dssp S-HHEEHHHHHTTSB-C--CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred CCHHHHHHHHccccCCc--ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence 56888899966655444 5999888999999999999 4567789999999999999999999999999998
Q ss_pred CCcc---hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCcc-ccccCHHHHHHHHHHH
Q 020968 143 GFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPC-GNVYTYQHLQKIAETA 212 (319)
Q Consensus 143 ~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~npt-G~~~~~~~l~~i~~~~ 212 (319)
.|.. ........|.+++.++... +..+++++|++.+.. .+++|+|++|+|-. |.++|.+++++|.++|
T Consensus 77 aHi~~~E~ga~~~~~G~~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a 154 (290)
T PF01212_consen 77 AHIHFDETGAIEELSGAKLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA 154 (290)
T ss_dssp EHHHHSSTTHHHHHTTCEEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred ceeeeeccchhhHhcCcEEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence 8743 3344567899999888643 247999999998854 46899999998864 8999999999999999
Q ss_pred HHcCCEEEEeCCCCCccC--CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 213 KKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 213 ~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+++|+.++.|.+--...- .+.....+.... .++..|++|..++++ |.+++.+
T Consensus 155 ~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~----D~v~~~~tK~~g~~~---Gavl~~~ 208 (290)
T PF01212_consen 155 REHGLPLHMDGARLANAAAALGVSLAEIAAGA----DSVSFGGTKNGGAPG---GAVLAGN 208 (290)
T ss_dssp HHHT-EEEEEETTHHHHHCHHHHHHHHHHTTS----SEEEEETTSTT-SSS---EEEEEES
T ss_pred HhCceEEEEehhhHHHhhhcccccHHHHhhhC----CEEEEEEEccccccc---ceEEEec
Confidence 999999999998543211 011111111111 267779999987776 7777655
No 258
>PLN02624 ornithine-delta-aminotransferase
Probab=99.61 E-value=9.2e-14 Score=131.33 Aligned_cols=236 Identities=12% Similarity=0.048 Sum_probs=147.4
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC-CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
+..++||..|.-.... ---.|.+.+++++++....... +-......+|.+.+++++ ..+.+++++++++|
T Consensus 74 G~~ylD~~sg~~~~~~-Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~--------~~~~~~f~~SGseA 144 (474)
T PLN02624 74 GKKYLDFLSAYSAVNQ-GHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF--------GYDMVLPMNTGAEG 144 (474)
T ss_pred CCEEEEcccchhcccC-CCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc--------CCCeEEEeCChHHH
Confidence 5567787766422111 1237899999999887643211 111122234455555443 24689999999999
Q ss_pred HHHHHHHhcC---------CCC-EEEEcCCCCcchHHHHhhCCCe-------------EEEEeccCCCCCcCCHHHHHhh
Q 020968 123 IEVILTVLAR---------PGA-NILLPRPGFPYYEARATHSHLE-------------VRHFDLLPAKGWEVDLDAVEAL 179 (319)
Q Consensus 123 i~~~~~~l~~---------~gd-~Vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~ 179 (319)
+..+++.... ++. +|+....+|++....+...... +..++. .|++.+++.
T Consensus 145 ~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 217 (474)
T PLN02624 145 VETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDALEKI 217 (474)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHHHHH
Confidence 9999874432 122 5777777776643222211111 111111 267888888
Q ss_pred hc---cCceEEEEcCCCCccccccCHHH-HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcc
Q 020968 180 AD---ENTVALVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISK 255 (319)
Q Consensus 180 l~---~~~~~v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK 255 (319)
++ +++.+|++..++|++|.+++.++ +++|.++|++||+++|+||+|.++...|... ..........++ +++|
T Consensus 218 l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~-a~~~~~i~pDiv---~lsK 293 (474)
T PLN02624 218 FEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML-ACDWEEVRPDVV---ILGK 293 (474)
T ss_pred HHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh-hHHhcCCCCCEE---Eecc
Confidence 75 35677888888999999887665 9999999999999999999999876555322 111111112233 3689
Q ss_pred ccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968 256 RWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 256 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
.++.+++++|++++++ +++..+..... .+.+.+++.+.++..++
T Consensus 294 ~lggG~~pigav~~~~--------~i~~~~~~~~~~~T~~g~pl~~aaa~aaL 338 (474)
T PLN02624 294 ALGGGVIPVSAVLADK--------DVMLCIKPGEHGSTFGGNPLASAVAMAAL 338 (474)
T ss_pred cccCCCCcceeeeecH--------HHHhHhccCCcCCCCCCCHHHHHHHHHHH
Confidence 9988889999999853 35555543322 23356778877776654
No 259
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.61 E-value=1.4e-13 Score=127.88 Aligned_cols=201 Identities=14% Similarity=0.079 Sum_probs=143.5
Q ss_pred CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE--eCCHHHHHHHHHHHhc--------
Q 020968 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL--TLGCTQAIEVILTVLA-------- 131 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--~~G~t~ai~~~~~~l~-------- 131 (319)
++.+.+.+.+...+..... .+...+...++.+.+.+++.+..|.+-..+++.. |+|+|+|++.++.+..
T Consensus 52 ~~~p~~~~~~~~~l~~~~~-np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMI-DKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 4456788888887764322 2222334457777777777776664311134544 8999999999886543
Q ss_pred CCC-----CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHH
Q 020968 132 RPG-----ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQ 206 (319)
Q Consensus 132 ~~g-----d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~ 206 (319)
..| ..|+++.-.|.++.+.++.+|+++..+++++ +++.+|++.|++++++++.+|+++..+|.||.+ .+++
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~i---dpi~ 206 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEY---EDVK 206 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCccc---CCHH
Confidence 112 3688999999999999999999999999865 446799999999999889999999999999999 5599
Q ss_pred HHHHHHHHc------CCEEEEeCCCCCccC---CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 207 KIAETAKKL------GIMVIADEVYDHLAF---GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 207 ~i~~~~~~~------~~~li~D~a~~~~~~---~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+|+++|+++ |+++++|.+|+.+.. -++....+. ...-.-+..|.+|++ ..-..+|.+++.+
T Consensus 207 ~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~---~~~~DSis~s~HK~~-~~P~g~G~l~~r~ 276 (431)
T TIGR01788 207 ALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR---LPRVKSINVSGHKYG-LVYPGVGWVIWRD 276 (431)
T ss_pred HHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC---CCCceEEEECchhcc-CCCCCcEEEEEeC
Confidence 999999999 999999999996431 122222221 112235777999984 3344488888765
No 260
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.60 E-value=5.1e-14 Score=131.46 Aligned_cols=257 Identities=18% Similarity=0.139 Sum_probs=151.2
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|.-..... --.|.+.+++.+++.......+.. ...+.+..+++.+.+..+ ....+.+++++++++|
T Consensus 31 dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGseA 106 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIG-HSHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAEA 106 (420)
T ss_pred CCCEEEECccCHHhccCC-CCCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHHH
Confidence 467788887774221111 235789999999887643222221 112333445555544221 1123689999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCC-C--------CCcCCHHHHH
Q 020968 123 IEVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPA-K--------GWEVDLDAVE 177 (319)
Q Consensus 123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~-~--------~~~~d~~~l~ 177 (319)
+..+++... ....+|+....+|++....+... +. .+..++.... . .+.-+++.++
T Consensus 107 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (420)
T TIGR00700 107 VENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAAR 186 (420)
T ss_pred HHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHH
Confidence 999987543 22357888888887754333221 11 1111221100 0 0001245566
Q ss_pred hhhc-----cCceEEEEcCCCCccccccCHHH-HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968 178 ALAD-----ENTVALVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (319)
Q Consensus 178 ~~l~-----~~~~~v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~ 251 (319)
+.+. ++..+|++.-....+|.+++.++ +++|.++|+++|+++|+||+|.++.+.+.. ..+..+... .-+.
T Consensus 187 ~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~-~a~~~~~~~---pDi~ 262 (420)
T TIGR00700 187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAM-FACEHEGPE---PDLI 262 (420)
T ss_pred HHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchh-HHHhhcCCC---CCEE
Confidence 6542 34456666555666787665454 999999999999999999999998766632 222222211 2234
Q ss_pred cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hcccccccc
Q 020968 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFLKS 316 (319)
Q Consensus 252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~~~ 316 (319)
++||.++ +|+|+||+++++ ++++.+.... ..+.+.++++|.++..++ +.++++.++
T Consensus 263 ~lsK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~ 321 (420)
T TIGR00700 263 TTAKSLA-DGLPLSGVTGRA--------EIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIER 321 (420)
T ss_pred Eeecccc-CCcceEEEEecH--------HHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHH
Confidence 5999986 899999999864 4666654322 234567888988875544 345454443
No 261
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.59 E-value=1.5e-13 Score=126.04 Aligned_cols=167 Identities=14% Similarity=0.085 Sum_probs=120.2
Q ss_pred cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch----HHHHhhCCCeEEEEe
Q 020968 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY----EARATHSHLEVRHFD 162 (319)
Q Consensus 87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~~~ 162 (319)
+...+|++.++++. ..+..+++++++.||.+++.++.++||+|+++.+.|... ...+...|+++..++
T Consensus 64 P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd 135 (384)
T PRK06434 64 PTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID 135 (384)
T ss_pred hhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence 45678888888887 345688899999999999999999999999988766543 356678899999998
Q ss_pred ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 242 (319)
+++.+.+.++ .+++++|++.+|+||++.+ .++++|.++|++++ +++|.+++.-. .+ .++..
T Consensus 136 ~~~~~~~~l~--------~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~-~~---~pl~~-- 196 (384)
T PRK06434 136 TDRLNSLDFD--------PSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPY-NQ---NPLDL-- 196 (384)
T ss_pred CCChhheeec--------CCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcc-cC---Cchhc--
Confidence 7543333222 1257899999999999998 55999999999998 45699975422 11 12221
Q ss_pred CCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968 243 SIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSFL 289 (319)
Q Consensus 243 ~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 289 (319)
.-.+++.|.+|.++.+| .-.|.+++.+ +++.++++..+
T Consensus 197 --gaDivv~S~tK~i~G~~d~~gG~vv~~~-------~~~~~~~~~~~ 235 (384)
T PRK06434 197 --GADVVIHSATKYISGHSDVVMGVAGTNN-------KSIFNNLVERR 235 (384)
T ss_pred --CCCEEEeecccccCCCCCceEEEEecCc-------HHHHHHHHHHH
Confidence 22389999999988766 4445555533 24666666544
No 262
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.59 E-value=2.1e-13 Score=127.22 Aligned_cols=255 Identities=15% Similarity=0.125 Sum_probs=154.0
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|--..... --.|.+.+++.+++.......+.. ...+.+..+++.+.+..+ ....+.+++++++++|
T Consensus 38 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGseA 113 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTG-HRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTTGAEA 113 (421)
T ss_pred CCCEEEEccCchhhhcCC-CCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCChHHH
Confidence 466788887663221111 346888899999887643222211 123344455555544321 1123689999999999
Q ss_pred HHHHHHHhcC--CCCEEEEcCCCCcchHHHHhh-CCC-------------eEEEEeccCCCCCcC----CHHHHHhhhc-
Q 020968 123 IEVILTVLAR--PGANILLPRPGFPYYEARATH-SHL-------------EVRHFDLLPAKGWEV----DLDAVEALAD- 181 (319)
Q Consensus 123 i~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~~~~~----d~~~l~~~l~- 181 (319)
+..+++.... ...+|+....+|++....+.. .+. .+..++..... ... +++.+++.+.
T Consensus 114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~ 192 (421)
T PRK09792 114 VENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKS 192 (421)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHh
Confidence 9999886532 235788888888775322221 111 12222221111 011 2467777764
Q ss_pred ----cCceEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968 182 ----ENTVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (319)
Q Consensus 182 ----~~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~ 256 (319)
++..+|++.-.++++|..+ +.+.+++|.++|+++|+++|+||++.++.+.+.. .....+..... +.+++|.
T Consensus 193 ~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~gK~ 268 (421)
T PRK09792 193 DIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMAKS 268 (421)
T ss_pred ccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEeehh
Confidence 2345666655589999765 8899999999999999999999999998776643 33333322222 4689999
Q ss_pred cCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hccccccc
Q 020968 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
+ .+|+++||++++. ++.+.+.... ..+...+++.|.+...++ ++++++.+
T Consensus 269 l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~ 321 (421)
T PRK09792 269 L-AGGMPLSGVVGNA--------NIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCE 321 (421)
T ss_pred h-cCCCceEEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHH
Confidence 7 5899999999853 4555543222 224466788887444432 34444443
No 263
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.58 E-value=2.8e-13 Score=127.58 Aligned_cols=256 Identities=13% Similarity=0.092 Sum_probs=149.0
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+..++||..|--...-. --.|.+.+++.++++..... .......+.+..+++.+.+..+.. ..+.++++++|++|+
T Consensus 53 G~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~--~~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA~ 128 (451)
T PRK06918 53 GNQYIDFAGAIGTINVG-HSHPKVKEALHKQVDQYIHT--GFNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEAV 128 (451)
T ss_pred CCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHHhccCc--cccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHHH
Confidence 66678887764221111 34678999999988764321 111112344555666665533211 125899999999999
Q ss_pred HHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCCC--CCcCC--------HHHHH
Q 020968 124 EVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAK--GWEVD--------LDAVE 177 (319)
Q Consensus 124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~--~~~~d--------~~~l~ 177 (319)
..+++... ....+|+....+|++....+... +. .+..++..... ..+.. .+.++
T Consensus 129 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (451)
T PRK06918 129 ENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFK 208 (451)
T ss_pred HHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHH
Confidence 99988643 22357888888887754333221 11 11222211000 00110 12333
Q ss_pred hhh----ccCceEEEEcCCCC-cccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968 178 ALA----DENTVALVIINPGN-PCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (319)
Q Consensus 178 ~~l----~~~~~~v~l~~p~n-ptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~ 251 (319)
+.+ ..+..+.++.-|-. ..|.++ +.+.+++|.++|+++|+++|+||+|.++.+.+.. .++..++.... +.
T Consensus 209 ~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~a~~~~~v~pD---i~ 284 (451)
T PRK06918 209 NFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-FAIEHFDVVPD---LI 284 (451)
T ss_pred HHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-ehhHhcCCCCC---EE
Confidence 332 22334555556643 346644 5555999999999999999999999998776642 23344432222 44
Q ss_pred cCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH--hcccccccc
Q 020968 252 SISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK--LKRNSFLKS 316 (319)
Q Consensus 252 s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l--~~~~~~~~~ 316 (319)
|+||.++ +|+|+||++++. ++++.+..... .+.+.+++.|.+...++ +.++.+.++
T Consensus 285 t~sK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~ 343 (451)
T PRK06918 285 TVSKSLG-AGVPISGVIGRK--------EIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDR 343 (451)
T ss_pred eeehhhc-CCCccEEEEEcH--------HHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHH
Confidence 8999986 899999999853 46666543322 34567888888855543 344444443
No 264
>PRK02769 histidine decarboxylase; Provisional
Probab=99.57 E-value=5.3e-13 Score=122.40 Aligned_cols=173 Identities=17% Similarity=0.136 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCc--EEEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC
Q 020968 90 LPARRAIADYLNRDLPYKLSPDD--VYLTLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165 (319)
Q Consensus 90 ~~lr~~ia~~~~~~~g~~~~~~~--i~~~~G~t~ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 165 (319)
.++.+.+.+++.+.+|. ++++ .++|+|+|+++..++.... .+++.|+++.-.|.+..+.++.+|++...++.++
T Consensus 64 ~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~ 141 (380)
T PRK02769 64 FDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLP 141 (380)
T ss_pred HHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCC
Confidence 45555555555555553 3344 4889999999877665432 4678999999999999999999999988888754
Q ss_pred CCCCcCCHHHHHhhhccC---ceEEEEcCCCCccccccCHHHHHHHHHHHHHcC---CEEEEeCCCCCccCCCCCCCCCc
Q 020968 166 AKGWEVDLDAVEALADEN---TVALVIINPGNPCGNVYTYQHLQKIAETAKKLG---IMVIADEVYDHLAFGNTPFVPMG 239 (319)
Q Consensus 166 ~~~~~~d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~---~~li~D~a~~~~~~~~~~~~~~~ 239 (319)
++.+|+++|++.+++. +.+|+++.++|++|.+ .++++|+++|+++| +++++|.+++.+...-....+..
T Consensus 142 --~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i---dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~ 216 (380)
T PRK02769 142 --NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPF 216 (380)
T ss_pred --CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccC
Confidence 4579999999999775 8899999999999999 55999999999998 69999999998543110000011
Q ss_pred ccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 240 VFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 240 ~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
.+.. .-..+..|.+|.++.| ..+|.+++.+
T Consensus 217 d~~~-~vDsis~s~HK~~~~P-~g~G~l~~r~ 246 (380)
T PRK02769 217 SFAD-GIDSIAISGHKFIGSP-MPCGIVLAKK 246 (380)
T ss_pred CccC-CCCEEEECCcccCCCC-CCcEEEEEeh
Confidence 1111 2336778999996533 4588888764
No 265
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.57 E-value=8.5e-13 Score=122.95 Aligned_cols=223 Identities=16% Similarity=0.100 Sum_probs=138.4
Q ss_pred chHHHHhcccccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHh-hcCCC-----CCCCCCcCC
Q 020968 16 ANEELKTASGITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSV-RSARF-----NCYSSTVGI 89 (319)
Q Consensus 16 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~-~~~~~-----~~Y~~~~g~ 89 (319)
+|+.++..+ .+|..+.+ +... ...+.++|-..+. ..+|.+++++...+ ..... ..|+..+.+
T Consensus 5 ~~~~~~~~~-~~~~~~~~---~~~~--~~~~~~~l~~sen------~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~ 72 (416)
T PRK13034 5 FSDSLEEYD-DEVFAAIN---KELE--RQQDHLELIASEN------FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFV 72 (416)
T ss_pred hhhhHhhhC-HHHHHHHH---HHHH--HHhcCeeeccccc------CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHH
Confidence 466665544 35555543 1111 1246666666552 35789999988875 33211 011112345
Q ss_pred HHHHH----HHHHHHhhhCCCCCCCCcEE-EeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch-HHHHhh--CCCeE--E
Q 020968 90 LPARR----AIADYLNRDLPYKLSPDDVY-LTLGCTQAIEVILTVLARPGANILLPRPGFPYY-EARATH--SHLEV--R 159 (319)
Q Consensus 90 ~~lr~----~ia~~~~~~~g~~~~~~~i~-~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~-~~~~~~--~g~~~--~ 159 (319)
.+|++ .+++++ ..+..+ .+++|+.|+..++.+++++||+|+++...|.+. ...++. .+... .
T Consensus 73 ~~lE~~~~~~la~l~--------g~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~ 144 (416)
T PRK13034 73 DEVEALAIERAKQLF--------GCDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAV 144 (416)
T ss_pred HHHHHHHHHHHHHHh--------CCCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeE
Confidence 67777 677766 234564 467889999999999999999999999988662 211111 12221 2
Q ss_pred EEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCC-CCCCCC
Q 020968 160 HFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFG-NTPFVP 237 (319)
Q Consensus 160 ~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~-~~~~~~ 237 (319)
.++++. ..+.+|++++++.++. ++++|+++.+. +|.. .++.+|.++|+++|+++++|++++...+. +....+
T Consensus 145 ~~~~~~-~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~---~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~ 218 (416)
T PRK13034 145 QYGVDR-LTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRE---LDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNP 218 (416)
T ss_pred Eccccc-ccCCcCHHHHHHHHhhcCCeEEEECCCc--cccc---cCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCC
Confidence 333322 2456899999988753 56777776654 3555 35888888999999999999998865443 221111
Q ss_pred CcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 238 ~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+. .-.++++|++|+++.+. -|++++.+
T Consensus 219 ---~~--~~Di~~~s~~K~l~g~~--GG~v~~~~ 245 (416)
T PRK13034 219 ---FP--HAHVVTTTTHKTLRGPR--GGMILTND 245 (416)
T ss_pred ---CC--CceEEEEeCcccCCCCC--CeEEEECc
Confidence 11 23489999999974442 37777644
No 266
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.55 E-value=1.1e-13 Score=121.00 Aligned_cols=158 Identities=23% Similarity=0.176 Sum_probs=129.4
Q ss_pred cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEe
Q 020968 87 VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY----YEARATHSHLEVRHFD 162 (319)
Q Consensus 87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~ 162 (319)
+....|++.++.+- ..-.-+.+.+++.|+..++..+.++||.|+..+--|.+ +...++.+|+++.+++
T Consensus 62 PT~~vlE~RiAaLE--------GG~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd 133 (426)
T COG2873 62 PTTDVLEERIAALE--------GGVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD 133 (426)
T ss_pred chHHHHHHHHHHhh--------cchhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence 45578888888776 22345667788999999999999999999999877755 3455688999999887
Q ss_pred ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 242 (319)
. .|++.+++++++++++|++....||.+.+++ +++|+++|+++++++|+|.++..- .+....
T Consensus 134 ~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atp--------yl~rP~ 195 (426)
T COG2873 134 P-------DDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATP--------YLCRPI 195 (426)
T ss_pred C-------CCHHHHHHHhCcccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcc--------eecchh
Confidence 5 3899999999999999999999999999955 999999999999999999998761 222222
Q ss_pred CCCCeEEEecCccccCCCcceeeEEEee
Q 020968 243 SIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
+..-.|++.|+||+.+..|--+|-+++.
T Consensus 196 ~hGADIVvHS~TK~igGhGt~iGG~iVD 223 (426)
T COG2873 196 EHGADIVVHSATKYIGGHGTAIGGVIVD 223 (426)
T ss_pred hcCCCEEEEeecccccCCccccceEEEe
Confidence 2344599999999999999999998873
No 267
>PRK15029 arginine decarboxylase; Provisional
Probab=99.54 E-value=4.2e-13 Score=130.97 Aligned_cols=193 Identities=11% Similarity=0.049 Sum_probs=136.6
Q ss_pred CCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEec
Q 020968 84 SSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDL 163 (319)
Q Consensus 84 ~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~ 163 (319)
.|..-+.+..+..|+.++ .....++++|+|.++.+++.+++++||+|+++..+|.+....+...|+.++++..
T Consensus 202 ~p~G~I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P 274 (755)
T PRK15029 202 DHTGAFGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVP 274 (755)
T ss_pred CCCcHHHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecc
Confidence 344445677777777773 2467899999999999999999999999999999999999999999999998865
Q ss_pred cCCCCC----cCC-----HHHHHhhhccC--ce--------EEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCC
Q 020968 164 LPAKGW----EVD-----LDAVEALADEN--TV--------ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEV 224 (319)
Q Consensus 164 ~~~~~~----~~d-----~~~l~~~l~~~--~~--------~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a 224 (319)
.. +.+ .++ ++.+++++... .+ ++++++|+. .|++++ +++|+++|++++++|++|||
T Consensus 275 ~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEA 349 (755)
T PRK15029 275 SR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEA 349 (755)
T ss_pred cc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECc
Confidence 43 222 234 88898887432 23 889999874 688855 89999999999999999999
Q ss_pred CCCc-cCCCCCCCCCccc-----C-CCCCeEEEecCccccCCCcceeeEEEeeCCC-CCccchHHHHHHHHhhhh
Q 020968 225 YDHL-AFGNTPFVPMGVF-----G-SIVPVLTLGSISKRWIVPGWRLGWLVTSDPN-GILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 225 ~~~~-~~~~~~~~~~~~~-----~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~-~~~~~~~~~~~~~~~~~~ 291 (319)
|+.. .|.. ..+....+ . ....++++.|.+|+ +|++.-|.++.-+.+ ......++.+.+..++++
T Consensus 350 hGah~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LHv~~~~~~id~~r~~~~l~~~qST 421 (755)
T PRK15029 350 WYGYARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAINFSRFNQAYMMHATT 421 (755)
T ss_pred cccccccCc-cccccccccccccccCCCceEEEEchhhc--ccchhhhhhheeCCCccccCHHHHHHHHHHHcCC
Confidence 9864 3432 22211222 1 11235999999999 677777776544222 122223444445444443
No 268
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.54 E-value=1.2e-13 Score=117.12 Aligned_cols=218 Identities=17% Similarity=0.203 Sum_probs=155.3
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~ 124 (319)
...++|-+...+ .|..+++++|.++...+.. |+.++...+|++.+|+.+. .+.-++++++|.++.
T Consensus 21 ~~~vDLRSDTvT-----~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~G--------KEAgLFv~SGTmgNl 85 (384)
T KOG1368|consen 21 HRSVDLRSDTVT-----VPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFG--------KEAGLFVPSGTMGNL 85 (384)
T ss_pred eecccccccccc-----CChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhC--------ccceeeecccccccH
Confidence 345666666543 6678999999998877765 6666677899999999983 455555566666777
Q ss_pred HHHHHhc-CCCCEEEEcCCCCcc-hH--HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc--------CceEEEEcCC
Q 020968 125 VILTVLA-RPGANILLPRPGFPY-YE--ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--------NTVALVIINP 192 (319)
Q Consensus 125 ~~~~~l~-~~gd~Vl~~~p~~~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--------~~~~v~l~~p 192 (319)
++++..+ ++|..|++-+-+|-. |. .+....|+.+.++. ++++..+++++||.++.. -+++|++.|.
T Consensus 86 laIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~--~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT 163 (384)
T KOG1368|consen 86 LAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVK--NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENT 163 (384)
T ss_pred HHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeee--eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecc
Confidence 7777665 589999999877732 33 45566777776665 456678999999998862 4689999999
Q ss_pred CCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 193 GNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 193 ~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
+|-+| .++|.+++.++.++|+++++.+.+|.+--+..--.. -.++..+...-. -+.-.+||.++.| +|.+++.+
T Consensus 164 ~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavas-gV~vk~i~~~fD-SVsiCLSKglgAP---VGSViVG~ 238 (384)
T KOG1368|consen 164 HNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVAS-GVPVKKICSAFD-SVSICLSKGLGAP---VGSVIVGS 238 (384)
T ss_pred ccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHc-CCCHHHHHHhhh-hhhhhhhccCCCC---cccEEEcc
Confidence 87776 999999999999999999999999997654321100 122222221111 1223689998777 78887765
Q ss_pred CCCCccchHHHHHHHHhhhh
Q 020968 272 PNGILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~ 291 (319)
+ .++++.+.++-.
T Consensus 239 k-------~FI~kA~~~RKa 251 (384)
T KOG1368|consen 239 K-------DFIDKARHFRKA 251 (384)
T ss_pred H-------HHHHHHHHHHHH
Confidence 4 588888877654
No 269
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.54 E-value=5.4e-13 Score=124.46 Aligned_cols=247 Identities=15% Similarity=0.107 Sum_probs=150.3
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|--..... --.|.+.+++.+++.......+.. ...+.+..+++.+.+..+. -..+.+++++++++|
T Consensus 38 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA 113 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTG-HRHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAPI-DGPAKTAFFTTGAEA 113 (421)
T ss_pred CCCEEEEcccCHHhhccC-CCCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCCC-CCCceEEEeCCcHHH
Confidence 466788887663211111 335788899999887643222211 1123334455555443210 124689999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhh-CCCe-------------EEEEeccCCCCC----cCCHHHHHhhhc-
Q 020968 123 IEVILTVLA--RPGANILLPRPGFPYYEARATH-SHLE-------------VRHFDLLPAKGW----EVDLDAVEALAD- 181 (319)
Q Consensus 123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~~~----~~d~~~l~~~l~- 181 (319)
+..+++... ....+|+....+|++....+.. .+.. +..++. +.... ..+++.+++.+.
T Consensus 114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~~~ 192 (421)
T PRK06777 114 VENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALY-PNELHGVSVEEALSSVERLFKA 192 (421)
T ss_pred HHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC-CccccCcCHHHHHHHHHHHHHh
Confidence 999988543 1235788888888775433332 1210 111111 10000 113556777664
Q ss_pred ----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968 182 ----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (319)
Q Consensus 182 ----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~ 256 (319)
++..+|++....+..|. +++.+.++++.++|+++|+++|+||+|.++.+.+.. .....+.....++ ++||.
T Consensus 193 ~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~~~pDiv---~~sK~ 268 (421)
T PRK06777 193 DIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYDVKPDLI---TMAKS 268 (421)
T ss_pred ccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcCCCCCEE---eeehh
Confidence 23455555555677785 678999999999999999999999999998766642 2233333222233 79999
Q ss_pred cCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
++ +|+|+||++++. ++++.+..... .+.+.+++.|.++..++
T Consensus 269 l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~L 311 (421)
T PRK06777 269 LG-GGMPISAVVGRA--------EVMDAPAPGGLGGTYAGNPLAVAAALAVL 311 (421)
T ss_pred hc-CCCceEEEEEcH--------HHHhccCCCCCCCCCCcCHHHHHHHHHHH
Confidence 87 899999999853 46665543322 34567888888877765
No 270
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.54 E-value=2.1e-12 Score=108.41 Aligned_cols=205 Identities=16% Similarity=0.178 Sum_probs=159.2
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCC--------CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYS--------STVGILPARRAIADYLNRDLPYKLSPDDVYL 115 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~--------~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~ 115 (319)
..+.||++.=... --++++.++++.+.-+......|- ..+-+..+.+.+++|+ ..|.+-+
T Consensus 14 ~r~~iNv~PiQrG----GiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl--------g~D~~R~ 81 (382)
T COG1103 14 TRGFINVNPIQRG----GILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL--------GMDEVRV 81 (382)
T ss_pred hcCccccChhhcc----CcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh--------CCceeee
Confidence 3566666644332 245678888887764432111111 1123567788899998 6788999
Q ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-------CceEEE
Q 020968 116 TLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------NTVALV 188 (319)
Q Consensus 116 ~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~~v~ 188 (319)
|.|+.++-++++++++++||.|++....|....-.++..|+++..+|......|.++++...+.+.+ .+.+++
T Consensus 82 t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lal 161 (382)
T COG1103 82 TAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALAL 161 (382)
T ss_pred cccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEE
Confidence 9999999999999999999999999998887778889999999999976666688999888776642 367888
Q ss_pred EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968 189 IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (319)
Q Consensus 189 l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~ 268 (319)
++++....|.. .+-++++++|++++++++...+|.. |.-+.+......+ ++++|-+|++ .+.-.+|.+.
T Consensus 162 lTh~Dg~YGNl---~Dakkva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~D---FiVgSGHKsm-AAs~PiGvl~ 230 (382)
T COG1103 162 LTHVDGEYGNL---ADAKKVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGAD---FIVGSGHKSM-AASAPIGVLA 230 (382)
T ss_pred EeccCCCcCCc---hhhHHHHHHHHHcCCceEeecceee----ccccccccccCCC---EEEecCccch-hccCCeeEEe
Confidence 99998889988 6799999999999999999999987 5566666666554 9999999995 6667899987
Q ss_pred eeC
Q 020968 269 TSD 271 (319)
Q Consensus 269 ~~~ 271 (319)
...
T Consensus 231 ~~e 233 (382)
T COG1103 231 MSE 233 (382)
T ss_pred ehh
Confidence 743
No 271
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.53 E-value=1e-12 Score=120.82 Aligned_cols=185 Identities=18% Similarity=0.170 Sum_probs=133.2
Q ss_pred CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc-hHHHHhhCCCeEEE
Q 020968 82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY-YEARATHSHLEVRH 160 (319)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~-~~~~~~~~g~~~~~ 160 (319)
.|+.++...+|++.+++++ ..+.++.++++|.|+++++...+++||.| +...|.. ........|...+.
T Consensus 73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvD 142 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVD 142 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEe
Confidence 5888889999999999999 45679999999999998776678899965 4444433 33335677775444
Q ss_pred Eecc--------CCCCCcCCHHHHHhhhccC----ceEEEEcCCCCcc-ccccCHHHHHHHHHHHHHcCCEEEEeCCCCC
Q 020968 161 FDLL--------PAKGWEVDLDAVEALADEN----TVALVIINPGNPC-GNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (319)
Q Consensus 161 ~~~~--------~~~~~~~d~~~l~~~l~~~----~~~v~l~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~ 227 (319)
+..+ ....+.+|+++++++++++ ++++.+.+++|.. |..+|.++++++.++|+++|+.||+|.+...
T Consensus 143 i~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~ 222 (460)
T PRK13237 143 IIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCV 222 (460)
T ss_pred eecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchh
Confidence 4211 1245789999999998753 3467778888887 7999999999999999999999999998874
Q ss_pred c----c------CCCCCCC----CCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh
Q 020968 228 L----A------FGNTPFV----PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL 289 (319)
Q Consensus 228 ~----~------~~~~~~~----~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~ 289 (319)
- + +.+.... .+.++. .+++.|++|.++.+- -|+++..+ +++.++++..+
T Consensus 223 gna~fI~~re~~y~~~~i~ei~~e~~s~a----D~~t~S~~K~~~~~~--GG~i~t~D-------~eL~~~~r~~~ 285 (460)
T PRK13237 223 ENAYFIKEREEGYQDKSIKEIVHEMFSYA----DGCTMSGKKDCLVNI--GGFLAMND-------EELFDEAKELV 285 (460)
T ss_pred cChhhhcccccccCCCcHhHHhhhccCcC----cEEEEeCCCCCCCCC--ceEEEECC-------HHHHHHHHHhc
Confidence 2 1 1121100 011122 277889999976651 28888765 36888888774
No 272
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.53 E-value=1.3e-12 Score=121.98 Aligned_cols=204 Identities=19% Similarity=0.166 Sum_probs=152.8
Q ss_pred CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCC--------
Q 020968 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP-------- 133 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~-------- 133 (319)
.+++...+.+...+..... .-...++..++++.+.+++.+.++.. ..-.=.+|+|+|+++.+++.+....
T Consensus 73 ~~~~~a~~~~~~~~~~nl~-d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~ 150 (460)
T COG0076 73 RVPPVAAELLVSALNKNLG-DPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAE 150 (460)
T ss_pred CCHHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhc
Confidence 4567777777776665321 11122366899999999999887755 3445689999999999887765311
Q ss_pred C------CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceE--EEEcCCCCccccccCHHHH
Q 020968 134 G------ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVA--LVIINPGNPCGNVYTYQHL 205 (319)
Q Consensus 134 g------d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--v~l~~p~nptG~~~~~~~l 205 (319)
+ ..|+++.-.|.++.+.+..+|++...++..+. ++.+|++++++++++.+.. |+-+.++.++|.+ +++
T Consensus 151 ~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Ddi 226 (460)
T COG0076 151 SGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DDI 226 (460)
T ss_pred ccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---CCH
Confidence 1 16999999999999999999999999998765 7789999999999887665 7778889999999 889
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (319)
Q Consensus 206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~ 272 (319)
++|.++|+++++++++|.||+++..--..+.....+.-..-.-+.-+++|. +..=..+||++..++
T Consensus 227 ~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~ 292 (460)
T COG0076 227 EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDE 292 (460)
T ss_pred HHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccc-cCCCCCceEEEEECH
Confidence 999999999999999999999876411111111112221223455699999 676677999999875
No 273
>PLN03032 serine decarboxylase; Provisional
Probab=99.51 E-value=3.8e-12 Score=116.06 Aligned_cols=172 Identities=20% Similarity=0.137 Sum_probs=126.8
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcE--EEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968 89 ILPARRAIADYLNRDLPYKLSPDDV--YLTLGCTQAIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (319)
Q Consensus 89 ~~~lr~~ia~~~~~~~g~~~~~~~i--~~~~G~t~ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 164 (319)
..++.+.+.+++.+.+| .+++++ ++|+|+|+++..++.... .++..|+++.-.|.+..+.++.+|.++..++.+
T Consensus 64 a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d 141 (374)
T PLN03032 64 SRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTL 141 (374)
T ss_pred HHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeC
Confidence 35666666666666555 355666 999999999998887654 245689999999999999999999998888875
Q ss_pred CCCCCcCCHHHHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcC-----CEEEEeCCCCCccC--CCCC
Q 020968 165 PAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLG-----IMVIADEVYDHLAF--GNTP 234 (319)
Q Consensus 165 ~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~-----~~li~D~a~~~~~~--~~~~ 234 (319)
. ++.+|+++|++++++ ++.+|+++..+|++|.+ +++++|+++|+++| +++++|.+|+.+.. ...
T Consensus 142 ~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i---dpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~- 215 (374)
T PLN03032 142 P--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV---DDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSR- 215 (374)
T ss_pred C--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC---CCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCC-
Confidence 4 457999999999976 46678888889999999 66999999999986 58999999987432 111
Q ss_pred CCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 235 FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 235 ~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
.+...+.. .-.-+..|.+|..+.| ..+|.+++.+
T Consensus 216 -~~~~~~~~-~vDSis~s~HK~~g~P-~g~G~ll~r~ 249 (374)
T PLN03032 216 -APEVTFRK-PIGSVSVSGHKFLGCP-MPCGVALTRK 249 (374)
T ss_pred -CcccCCCc-CCcEEEECcccccCCC-cCeEEEEEEc
Confidence 01111211 1235677999995433 4588888865
No 274
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.51 E-value=7e-13 Score=132.85 Aligned_cols=162 Identities=14% Similarity=0.144 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH----HHHHHHHHHhcCC-CC----EEEEcCCCCcchHHHHhhCCCeEEE
Q 020968 90 LPARRAIADYLNRDLPYKLSPDDVYLTLGCT----QAIEVILTVLARP-GA----NILLPRPGFPYYEARATHSHLEVRH 160 (319)
Q Consensus 90 ~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t----~ai~~~~~~l~~~-gd----~Vl~~~p~~~~~~~~~~~~g~~~~~ 160 (319)
.++|+.+++++ | .+.|.++++++ ++++++++++.++ || +|+++...|......+...|++++.
T Consensus 571 ~~~r~~la~i~----g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~ 642 (993)
T PLN02414 571 EDLGDLLCEIT----G----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVV 642 (993)
T ss_pred HHHHHHHHHHh----C----CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEE
Confidence 35555555555 3 38999999998 8999999998866 88 8999999999888888889999999
Q ss_pred EeccCCCCCcCCHHHHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC
Q 020968 161 FDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP 237 (319)
Q Consensus 161 ~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~ 237 (319)
++.+. ++.+|+++|++++++ ++++|++++|+|-+|.. .++++|+++|+++|+++++|.++..-.. ....
T Consensus 643 v~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e---~~I~eI~~iah~~Galv~vDgAq~~a~~---~l~~ 714 (993)
T PLN02414 643 VGTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE---EGIDEICDIIHDNGGQVYMDGANMNAQV---GLTS 714 (993)
T ss_pred eccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc---chHHHHHHHHHHcCCEEEEEecCHHhcc---CcCC
Confidence 99853 347999999999984 67899999999999998 5699999999999999999999865211 1112
Q ss_pred CcccCCCCCeEEEecCccccCCC----cceeeEEEee
Q 020968 238 MGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVTS 270 (319)
Q Consensus 238 ~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i~~~ 270 (319)
...++ -.++++|.+|+|+.| |-.+|++.+.
T Consensus 715 p~~~G---aD~~~~s~HK~f~~P~G~GGPg~G~l~~~ 748 (993)
T PLN02414 715 PGFIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVK 748 (993)
T ss_pred ccccC---CCEEEecCCccCCcCcccCCCCeeeEEEc
Confidence 22233 248899999987743 5668888663
No 275
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.49 E-value=2.1e-12 Score=116.35 Aligned_cols=188 Identities=21% Similarity=0.273 Sum_probs=138.7
Q ss_pred CCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 020968 62 RTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPR 141 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~ 141 (319)
+.++.+++++.+.. ..+.++. ..++-+.+.+.+...++.. +.+-+++++++|.++..++.+++++||+|++..
T Consensus 15 ~v~~~V~~am~~~~----~~h~s~~--F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~ 87 (383)
T COG0075 15 PVPPRVLLAMARPM----VGHRSPD--FVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVV 87 (383)
T ss_pred CCCHHHHHHhcCCC----CCCCCHH--HHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEe
Confidence 67788888776543 2234432 2333333344444434322 345567778899999999999999999999888
Q ss_pred CCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc--CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCC
Q 020968 142 PGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE--NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI 217 (319)
Q Consensus 142 p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~ 217 (319)
....+ +..+++.+|++++.+... .+-.+|++++++.+++ ..++|.++|.-.+||+. .++++|+++|++||.
T Consensus 88 nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl---npl~~I~~~~k~~g~ 162 (383)
T COG0075 88 NGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL---NPLKEIAKAAKEHGA 162 (383)
T ss_pred CChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCccccc---CcHHHHHHHHHHcCC
Confidence 77754 678999999999998875 3446899999999984 46789999999999999 459999999999999
Q ss_pred EEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCC-CcceeeEEEee
Q 020968 218 MVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTS 270 (319)
Q Consensus 218 ~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~ 270 (319)
++|+|..-+. |..+..+..+.- .+++.+.-|.+++ || +|++.++
T Consensus 163 l~iVDaVsS~----Gg~~~~vd~wgi---Dv~itgSQK~l~~PPG--la~v~~S 207 (383)
T COG0075 163 LLIVDAVSSL----GGEPLKVDEWGI---DVAITGSQKALGAPPG--LAFVAVS 207 (383)
T ss_pred EEEEEecccC----CCcccchhhcCc---cEEEecCchhccCCCc--cceeEEC
Confidence 9999998775 223334444433 3999999999888 57 5666653
No 276
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.48 E-value=5.8e-12 Score=116.55 Aligned_cols=216 Identities=18% Similarity=0.151 Sum_probs=141.2
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|--..+-.+. .|.+.+++.+++..... .+ .....+.+..+++++.+.. ..+.+++++++++|
T Consensus 34 dG~~~lD~~sg~~~~~lGh~-~p~v~~a~~~q~~~~~~-~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA 105 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHC-NPGMVEALAAQAEKLIN-PS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEA 105 (395)
T ss_pred CCCEEEECCcChhhccCCCC-CHHHHHHHHHHHHhccc-cc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHH
Confidence 46788999876432222233 58899999988765322 11 1234577788888886532 24689999999999
Q ss_pred HHHHHHHhcC------CC-CEEEEcCCCCcchH-HHHhhCCCeEEEEeccC-CCCC----cCCHHHHHhhhccCceEEEE
Q 020968 123 IEVILTVLAR------PG-ANILLPRPGFPYYE-ARATHSHLEVRHFDLLP-AKGW----EVDLDAVEALADENTVALVI 189 (319)
Q Consensus 123 i~~~~~~l~~------~g-d~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~-~~~~----~~d~~~l~~~l~~~~~~v~l 189 (319)
+..+++.... +| .+|+.....|++.. ..+...+.........+ ..++ ..|++.+++.+.+++.+|++
T Consensus 106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~ 185 (395)
T PRK03715 106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVML 185 (395)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEE
Confidence 9999987741 23 57888888887643 33333332211100000 0111 13788999888777777777
Q ss_pred cCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEE
Q 020968 190 INPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLV 268 (319)
Q Consensus 190 ~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~ 268 (319)
...++..|.+. +.+.++++.++|+++|+++|+||++.++...|.... ...+.-... + .+++|.++ .|+.+|.++
T Consensus 186 Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a-~~~~gv~PD-i--~t~gK~lg-~G~p~~av~ 260 (395)
T PRK03715 186 EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFA-YELSGIEPD-I--MTLGKGIG-GGVPLAALL 260 (395)
T ss_pred eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhh-HhhcCCCCc-e--eeehhhhh-CCcceEEEE
Confidence 76677778764 678899999999999999999999998655554321 111221112 2 47799975 479999998
Q ss_pred eeC
Q 020968 269 TSD 271 (319)
Q Consensus 269 ~~~ 271 (319)
+.+
T Consensus 261 ~~~ 263 (395)
T PRK03715 261 AKA 263 (395)
T ss_pred Ecc
Confidence 754
No 277
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.48 E-value=2.5e-12 Score=128.91 Aligned_cols=207 Identities=16% Similarity=0.151 Sum_probs=136.2
Q ss_pred CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC---CCCC----CcCCHHHHHHHHHHHhhhCCCCCCCC--cEEEe
Q 020968 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN---CYSS----TVGILPARRAIADYLNRDLPYKLSPD--DVYLT 116 (319)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~~--~i~~~ 116 (319)
+++.|+.+..+ +.++..+.+++.........+ .|.. ..-+++.|+.+++++ +.+++ +|++|
T Consensus 34 ~~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l------ga~~~~~~VvFt 103 (805)
T PLN02724 34 GVVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF------NAPPSDYACVFT 103 (805)
T ss_pred CCEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh------CCCccceEEEEe
Confidence 47899998754 234456666665554321111 1111 123567788888887 33444 58999
Q ss_pred CCHHHHHHHHHHHh-cCCCCEEEEcCCCCcchH---HHHhhCCCeEEEEeccCC------CCCcCCH--HHHHhhh----
Q 020968 117 LGCTQAIEVILTVL-ARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPA------KGWEVDL--DAVEALA---- 180 (319)
Q Consensus 117 ~G~t~ai~~~~~~l-~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~------~~~~~d~--~~l~~~l---- 180 (319)
+|+|+|+++++.++ .++||+|++..-.|.+.. ..++..|+++..++++.. ....++. +.+++.+
T Consensus 104 snaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l 183 (805)
T PLN02724 104 SGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKL 183 (805)
T ss_pred CChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhh
Confidence 99999999999987 578999999887776643 334567999988887521 1112332 5566543
Q ss_pred ------ccCceEEEEcCCCCccccccCHHHHHHHHHHHHHc-----CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968 181 ------DENTVALVIINPGNPCGNVYTYQHLQKIAETAKKL-----GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (319)
Q Consensus 181 ------~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~-----~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~ 249 (319)
.+++++|.+++.+|.||.++|.+.+.++.+.++.+ ++++++|.++.- ++.+..+..+.. .++
T Consensus 184 ~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~~---Dfl 256 (805)
T PLN02724 184 QKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYPA---DFV 256 (805)
T ss_pred ccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcCC---CEE
Confidence 13557999999999999999966554444433322 368999999876 444455555443 389
Q ss_pred EecCccccCCC-cceeeEEEeeC
Q 020968 250 LGSISKRWIVP-GWRLGWLVTSD 271 (319)
Q Consensus 250 ~~s~sK~~~~~-G~r~G~i~~~~ 271 (319)
+.|++|+|+.| | +|++++.+
T Consensus 257 ~~S~HK~~GgP~G--~G~L~vr~ 277 (805)
T PLN02724 257 VVSFYKIFGYPTG--LGALLVRR 277 (805)
T ss_pred EEecceeccCCCC--ceEEEEeh
Confidence 99999998744 5 77777654
No 278
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.47 E-value=1.6e-12 Score=116.30 Aligned_cols=244 Identities=18% Similarity=0.203 Sum_probs=157.9
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
++..+|||..|--.... -..+|.+.++++++.+.-.. +.|. .+.+..+++.+.+..+ ..+.++++++++
T Consensus 40 ~G~~YlDf~~Giav~~l-GH~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s~---~~d~vff~NSGa 110 (404)
T COG4992 40 QGREYLDFAAGIAVNNL-GHCHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELSP---FADRVFFCNSGA 110 (404)
T ss_pred CCCEeeeeccceeeecc-CCCCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhCc---cccEEEEcCCcH
Confidence 47788998888532211 25679999999998765321 2232 3556666666655322 378999999999
Q ss_pred HHHHHHHHHhcCC-----CCEEEEcCCCCcchHHHHhhCCC-------------eEEEEeccCCCCCcCCHHHHHhhhcc
Q 020968 121 QAIEVILTVLARP-----GANILLPRPGFPYYEARATHSHL-------------EVRHFDLLPAKGWEVDLDAVEALADE 182 (319)
Q Consensus 121 ~ai~~~~~~l~~~-----gd~Vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~l~~ 182 (319)
||++.+++.-.+- ..+|+.....|++--..+-..+- .+..+|. -|++++++++++
T Consensus 111 EA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-------nDi~al~~ai~~ 183 (404)
T COG4992 111 EANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-------NDIEALEAAIDE 183 (404)
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-------CCHHHHHHHhcc
Confidence 9999999865321 24777777776542111111111 1112221 189999999999
Q ss_pred CceEEEEcCCCCccccccCH-HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc
Q 020968 183 NTVALVIINPGNPCGNVYTY-QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG 261 (319)
Q Consensus 183 ~~~~v~l~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G 261 (319)
++.+|++....-..|++.+. +-++++.++|++||+++|.||++.++..+|+-+. ...+.-.+.++ ++.|.+ ..|
T Consensus 184 ~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA-~e~~gV~PDI~---tlaK~L-gGG 258 (404)
T COG4992 184 DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFA-YEHYGVEPDIL---TLAKAL-GGG 258 (404)
T ss_pred CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHH-HHHhCCCCCEE---Eeeccc-cCC
Confidence 99999988888889976654 4589999999999999999999999887774321 11122212233 679995 667
Q ss_pred ceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hccccccc
Q 020968 262 WRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 262 ~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
+.+|.+++.. .....+..-. ..+.+.++++..+...++ +.++++.+
T Consensus 259 ~PigA~la~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~ 307 (404)
T COG4992 259 FPIGAMLATE--------EIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLE 307 (404)
T ss_pred ccceeeEEch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHH
Confidence 9999999852 1333333222 234556777776655543 45555544
No 279
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=4.4e-12 Score=118.37 Aligned_cols=256 Identities=14% Similarity=0.096 Sum_probs=149.7
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|--...- ---.|.+.++++++++.... +.......+.+..+++.+.+..+.. ..+.+++++++++|
T Consensus 38 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~SGseA 113 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNT-GHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVPGD-FAKKTIFVTTGAEA 113 (425)
T ss_pred CCCEEEEccccHHhhcc-CCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHH
Confidence 36678888777322111 13467888999998875321 1111112234444555555432211 12589999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHhh-CCC-------------eEEEEeccCCCCCcCC----HHHHHhhhc-
Q 020968 123 IEVILTVLA--RPGANILLPRPGFPYYEARATH-SHL-------------EVRHFDLLPAKGWEVD----LDAVEALAD- 181 (319)
Q Consensus 123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~~~~~d----~~~l~~~l~- 181 (319)
+..+++... ....+|+.....|++....+.. .+. .+..++...... +.+ ++.+++.+.
T Consensus 114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~l~~~~~~ 192 (425)
T PRK07495 114 VENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELH-GVSVEQSLAALDKLFKA 192 (425)
T ss_pred HHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccc-cccHHHHHHHHHHHHHh
Confidence 999988543 2246788888888765322211 110 123333321111 122 344566553
Q ss_pred ----cCceEEEEcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968 182 ----ENTVALVIINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (319)
Q Consensus 182 ----~~~~~v~l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~ 256 (319)
++..+|++.....-+| ..++.+.++++.++|+++|+++|+||++.++...+.. ..+...+.+.-+.++||.
T Consensus 193 ~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~----~a~~~~gv~pDi~tlsK~ 268 (425)
T PRK07495 193 DVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL----FAMEHHEVAADLTTMAKG 268 (425)
T ss_pred ccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc----eeecccCCCCCEEeehhh
Confidence 2344555443332377 4578899999999999999999999999987665532 112222233456789999
Q ss_pred cCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH--hcccccccc
Q 020968 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK--LKRNSFLKS 316 (319)
Q Consensus 257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l--~~~~~~~~~ 316 (319)
+ .+|+++|+++++. ++.+.+.... ..+.+.+++.+.+...++ ++++++.++
T Consensus 269 l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~ 322 (425)
T PRK07495 269 L-AGGFPLAAVTGRA--------EIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCER 322 (425)
T ss_pred h-cCCccceEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHH
Confidence 6 4899999999864 3555544322 234466788887544433 444444443
No 280
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=4.9e-12 Score=118.68 Aligned_cols=247 Identities=17% Similarity=0.100 Sum_probs=143.7
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|--..... --.|.+.+++.++++......... ...+....+++.+.+..+ -..+.+++++++++|
T Consensus 41 dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~~--~~~~~v~f~~SGseA 115 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVG-HRHPKVVQAIKEQADKLMHGPSGV--IYYESILKLAEELAEITP--GGLDCFFFSNSGAEA 115 (433)
T ss_pred CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence 366778887774221111 346789999999887532211110 112334445555444321 134689999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHHHh-hCC--C-----------eEEEEeccCCCC--Cc--------CCHHHH
Q 020968 123 IEVILTVLA--RPGANILLPRPGFPYYEARAT-HSH--L-----------EVRHFDLLPAKG--WE--------VDLDAV 176 (319)
Q Consensus 123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g--~-----------~~~~~~~~~~~~--~~--------~d~~~l 176 (319)
+..+++... ....+|+...-.|++....+. ..+ . .+..++...... .. -+++.+
T Consensus 116 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 195 (433)
T PRK08117 116 IEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDL 195 (433)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHH
Confidence 999988632 123678888877876432221 111 0 112222211000 00 144556
Q ss_pred Hhhhc-----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968 177 EALAD-----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (319)
Q Consensus 177 ~~~l~-----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~ 250 (319)
++.++ ++..+|++.......|.+ .+.+.++++.++|++||+++|+||+|.++...|.... ...++-. .-+
T Consensus 196 ~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~gv~---pDi 271 (433)
T PRK08117 196 ESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFGVV---PDI 271 (433)
T ss_pred HHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh-HhhcCCC---CCE
Confidence 66553 234455555445556765 5778899999999999999999999998766654321 1122211 224
Q ss_pred ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH
Q 020968 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l 307 (319)
.+++|.++ +|+++|++++.+ ++++.+..... .+.+.+++++.++...+
T Consensus 272 ~t~sK~lg-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~np~~~aaa~a~L 320 (433)
T PRK08117 272 MTIAKGIA-SGLPLSAVVASK--------ELMEQWPLGSHGTTFGGNPVACAAALATL 320 (433)
T ss_pred eehhhhcc-CCCcceeEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHH
Confidence 69999986 899999999853 46665543222 23455777777766654
No 281
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.46 E-value=4.1e-12 Score=118.83 Aligned_cols=257 Identities=18% Similarity=0.128 Sum_probs=149.9
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|.-..... --.|.+.+++++++.......+. ....+.+..+++.+.+..+ -..+.+++++++++|
T Consensus 40 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA 114 (423)
T PRK05964 40 DGRELIDAISSWWVATHG-HNHPYIDQAIREQLDRLDHVIFA--GFTHEPAERLAQRLVALTP--GGLDHVFFSDSGSVA 114 (423)
T ss_pred CCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHhhCCCcccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHH
Confidence 467788887774221111 23588999999988764321111 0112445556666655322 124689999999999
Q ss_pred HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCCCCcCCHHHHHhhhc
Q 020968 123 IEVILTVLAR-------P-GANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKGWEVDLDAVEALAD 181 (319)
Q Consensus 123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~~~d~~~l~~~l~ 181 (319)
+..+++.... + ..+|+...-.|++....+... +- .+..++....+....+++.+++.+.
T Consensus 115 ~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~ 194 (423)
T PRK05964 115 VEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLE 194 (423)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHH
Confidence 9999886521 2 368888888887744333221 11 1122222110000112677777774
Q ss_pred ---cCceEEEEcC-CCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968 182 ---ENTVALVIIN-PGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (319)
Q Consensus 182 ---~~~~~v~l~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~ 256 (319)
++..+|++.. .....|... +.+.++++.++|+++|+++|+||++.++...|... ....+.-... +-+++|.
T Consensus 195 ~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pD---i~~~~K~ 270 (423)
T PRK05964 195 KHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPD---IMCLSKG 270 (423)
T ss_pred hCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCC---eeeeehh
Confidence 2344555544 366677654 88999999999999999999999998875555321 1111221112 2367899
Q ss_pred cCCCcceeeEEEeeCCCCCccchHHHHHHHHh-------hhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968 257 WIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSDPATFIQFLKSSRK--LKRNSFLKS 316 (319)
Q Consensus 257 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~q~~~~~~l--~~~~~~~~~ 316 (319)
++.+++++|++++.. ++.+.+... .+.+.+.++++..++...+ +++++|.++
T Consensus 271 l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~ 331 (423)
T PRK05964 271 LTGGYLPLAATLCTA--------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLER 331 (423)
T ss_pred hhcCcccceEEEEcH--------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHH
Confidence 866668999988743 466666421 1122345666655554444 345556554
No 282
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.45 E-value=8.7e-12 Score=117.53 Aligned_cols=202 Identities=11% Similarity=0.054 Sum_probs=131.0
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC------CcCCHHH----HHHHHHHHhhhCCCCCCCCcE
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS------TVGILPA----RRAIADYLNRDLPYKLSPDDV 113 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~------~~g~~~l----r~~ia~~~~~~~g~~~~~~~i 113 (319)
..+.|+|-..+. .++|.+++++...+.......++. ......+ |+.+++++ | .+++++
T Consensus 33 ~~~~l~l~~sen------~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf----~--a~~~~~ 100 (452)
T PTZ00094 33 QIEGLELIASEN------FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF----G--LDPEEW 100 (452)
T ss_pred HHcCeeEecccc------cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCcccc
Confidence 467889888872 567889898887765422112221 1112233 34555555 3 356677
Q ss_pred EEe---CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhh----------CCCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 114 YLT---LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH----------SHLEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 114 ~~~---~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
.++ +|+++++..++.++.++||+|++....|..+...+.. .+.++..++.+. ++.+|++++++.+
T Consensus 101 ~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l 178 (452)
T PTZ00094 101 GVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELA 178 (452)
T ss_pred eeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHH
Confidence 666 7899999999999999999999988777654332211 112233344433 3579999999998
Q ss_pred cc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCC-CCCCcccCCCCCeEEEecCccccC
Q 020968 181 DE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTP-FVPMGVFGSIVPVLTLGSISKRWI 258 (319)
Q Consensus 181 ~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~~~~vi~~~s~sK~~~ 258 (319)
+. +++++++. ++.+|...+ +++|.++|+++|+++++|++++........ +.++. .-.+++.|.+|+++
T Consensus 179 ~~~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-----~~D~l~~S~hK~l~ 248 (452)
T PTZ00094 179 KAFRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-----YADVVTTTTHKSLR 248 (452)
T ss_pred HHhCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-----CCcEEEcCCccCCC
Confidence 54 56666654 345888865 788888999999999999999874432211 11111 22388999999864
Q ss_pred CCcceeeEEEeeC
Q 020968 259 VPGWRLGWLVTSD 271 (319)
Q Consensus 259 ~~G~r~G~i~~~~ 271 (319)
.|. .|++.+.+
T Consensus 249 GP~--Gg~l~~~~ 259 (452)
T PTZ00094 249 GPR--SGLIFYRK 259 (452)
T ss_pred CCC--ceEEEEec
Confidence 443 47777743
No 283
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.43 E-value=3.8e-11 Score=111.78 Aligned_cols=218 Identities=14% Similarity=0.049 Sum_probs=142.5
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC------CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN------CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
.+-|+|-..+ -.+.+.+.+++...+...... .|+.....++++....++.++.+|.. ..+|=..+
T Consensus 49 ~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~--~anvqp~S- 119 (493)
T PRK13580 49 RSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAE--HAYVQPHS- 119 (493)
T ss_pred hcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCC--cccccCCC-
Confidence 5677777666 245688888877655443222 23334556777777777777766533 34444444
Q ss_pred HHHHHHHHHHHhcCC-------------------------------CCEEEEcCCCCcchH---HHHhhCC--CeEEEEe
Q 020968 119 CTQAIEVILTVLARP-------------------------------GANILLPRPGFPYYE---ARATHSH--LEVRHFD 162 (319)
Q Consensus 119 ~t~ai~~~~~~l~~~-------------------------------gd~Vl~~~p~~~~~~---~~~~~~g--~~~~~~~ 162 (319)
++.|+..++.++++| ||+|+..++....+. ......+ .+...++
T Consensus 120 g~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~ 199 (493)
T PRK13580 120 GADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYG 199 (493)
T ss_pred cHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecc
Confidence 466777888888865 799998766553321 1111222 4555566
Q ss_pred ccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC-CCccc
Q 020968 163 LLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV-PMGVF 241 (319)
Q Consensus 163 ~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~ 241 (319)
++++ ...+|++++++.+.+.++.+++++.+|-.+ .. ++++|.++|+++|+++++|++|.....++.... .....
T Consensus 200 vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~ 274 (493)
T PRK13580 200 VDPD-TGLLDYDEIAALAREFKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPV 274 (493)
T ss_pred cCcc-cCccCHHHHHHHHhhcCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCC
Confidence 6533 357999999999998888999998877644 54 489999999999999999999997655432211 00111
Q ss_pred CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh
Q 020968 242 GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF 288 (319)
Q Consensus 242 ~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~ 288 (319)
. ...|+++|++|++ .|-+.|++++.. ++++.+...
T Consensus 275 ~--~~D~vtgT~hKaL--~GP~GG~I~~~~--------~l~~~L~~a 309 (493)
T PRK13580 275 P--HADIVTTTTHKTL--RGPRGGLVLAKK--------EYADAVDKG 309 (493)
T ss_pred C--CCcEEEeCChhhc--cCCCeEEEEecH--------HHHHHHhhC
Confidence 1 2238899999996 333458888753 466666433
No 284
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=4.1e-11 Score=112.61 Aligned_cols=247 Identities=18% Similarity=0.104 Sum_probs=144.4
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+..++|+..|--...- ---.|.+.+++.+++.... .+.......+.+..+++.+.+..+. ...+.+++++++++|+
T Consensus 55 G~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA~ 130 (443)
T PRK06058 55 GNRLIDLGSGIAVTSV-GNSAPRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGAEAV 130 (443)
T ss_pred CCEEEEcCcchhhhcc-CCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHHH
Confidence 5567777766321111 1346889999999887532 2222112345566677776554321 1125789999999999
Q ss_pred HHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCC-CC---CcC--------CHHH
Q 020968 124 EVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPA-KG---WEV--------DLDA 175 (319)
Q Consensus 124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~-~~---~~~--------d~~~ 175 (319)
..+++... ...++|+....+|+++...+... +. .+..++.... .. ... ..+.
T Consensus 131 e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (443)
T PRK06058 131 ENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITV 210 (443)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHH
Confidence 99988432 23378999999998865443321 10 1111221100 00 001 1223
Q ss_pred HHhhhccCceEEEEcCCCCcc-ccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecC
Q 020968 176 VEALADENTVALVIINPGNPC-GNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSI 253 (319)
Q Consensus 176 l~~~l~~~~~~v~l~~p~npt-G~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~ 253 (319)
+++.+..+..+.++.-|-+.. |.+ .+.+.++++.++|+++|+++|.||++.+|...|..+ ....++-.+.++ ++
T Consensus 211 l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv---~~ 286 (443)
T PRK06058 211 IEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLI---TT 286 (443)
T ss_pred HHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEE---EE
Confidence 334433233344456664444 554 467789999999999999999999999886655432 112222222234 34
Q ss_pred ccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhh-hhcCCcchHHHHHHHHHH
Q 020968 254 SKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFL-NISSDPATFIQFLKSSRK 307 (319)
Q Consensus 254 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l 307 (319)
+|.++ .|+++|++++.+ ++.+.+.... ..+.+.+++++.++...+
T Consensus 287 gK~l~-~G~Pi~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L 332 (443)
T PRK06058 287 AKGIA-GGLPLSAVTGRA--------EIMDAPHPGGLGGTYGGNPVACAAALAAI 332 (443)
T ss_pred ccccc-CCCccEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHH
Confidence 79976 799999999853 4555554332 234567888888777755
No 285
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.42 E-value=6.5e-12 Score=121.66 Aligned_cols=171 Identities=13% Similarity=0.158 Sum_probs=122.4
Q ss_pred CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH-HhhCCCeEEEEec
Q 020968 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR-ATHSHLEVRHFDL 163 (319)
Q Consensus 85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~-~~~~g~~~~~~~~ 163 (319)
+..-..+..+..|+.++ .....++++|+|.++..++.+++.+||+|++...+|.+.... +...|+.++++..
T Consensus 172 ~eG~i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P 244 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLET 244 (720)
T ss_pred CChHHHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeec
Confidence 33334566666777663 245789999999999999999999999999999999987774 8899999998875
Q ss_pred cCCCCCc----CCH-----HHHHhhhccC----------ceEEEEcCCCCccccccCHHHHHHHHHH-HHHcCCEEEEeC
Q 020968 164 LPAKGWE----VDL-----DAVEALADEN----------TVALVIINPGNPCGNVYTYQHLQKIAET-AKKLGIMVIADE 223 (319)
Q Consensus 164 ~~~~~~~----~d~-----~~l~~~l~~~----------~~~v~l~~p~nptG~~~~~~~l~~i~~~-~~~~~~~li~D~ 223 (319)
.. +.++ ++. +.+++++.+. .+++++++|+. .|++++ +++|+++ ++.++ .|++||
T Consensus 245 ~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDE 318 (720)
T PRK13578 245 AR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDS 318 (720)
T ss_pred cc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeC
Confidence 44 2233 354 4477777543 47888998874 699966 7888887 56777 999999
Q ss_pred CCCCcc-CCCC--CCCCC-cccCC-CCCeEEEecCccccCCCcceeeEEEee
Q 020968 224 VYDHLA-FGNT--PFVPM-GVFGS-IVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 224 a~~~~~-~~~~--~~~~~-~~~~~-~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
||+... |... ..+.. ..... +..++++.|.+|. ++++.-+.++..
T Consensus 319 Ahgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~LHv 368 (720)
T PRK13578 319 AWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQIHK 368 (720)
T ss_pred cchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhhhc
Confidence 999743 3321 01111 11222 3457999999999 677777766543
No 286
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.41 E-value=4.9e-12 Score=115.61 Aligned_cols=185 Identities=10% Similarity=0.039 Sum_probs=121.6
Q ss_pred CCCcHHHHHHHHHHhhcCC-C--CCCCCC-------cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC-HHHHHHHHHHH
Q 020968 61 FRTASVAVDAIVHSVRSAR-F--NCYSST-------VGILPARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEVILTV 129 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~-~--~~Y~~~-------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G-~t~ai~~~~~~ 129 (319)
.+.|+.+.+++.+.+.... . ..|... .-+.+.|+.++++++. -+++++++++| +|++++.++..
T Consensus 8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~-----~~~~~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNI-----PDNYKVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCC-----CCCceEEEEcCCchHHHHHHHHh
Confidence 4678999999998873210 0 111111 2245677777777731 14678999988 99999999999
Q ss_pred hcC---CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC-HHHHHhhhccCceEEEEcCCCCccccccCHHHH
Q 020968 130 LAR---PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD-LDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (319)
Q Consensus 130 l~~---~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l 205 (319)
+.. +|+.|++ .+........++..|+++..++.+...++ .+ ++..+..+++++++|.+++..|.||..++
T Consensus 83 l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~---- 156 (355)
T cd00611 83 LLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD---- 156 (355)
T ss_pred cCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc----
Confidence 987 4455543 22222234477888999998887432222 13 23333445678899999999999999843
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
++++.+|+++++|.+.+. +..+..+..++ +.+.|..|.+|.+| +|.+++..
T Consensus 157 ----~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~ 207 (355)
T cd00611 157 ----EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRK 207 (355)
T ss_pred ----eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECH
Confidence 334458999999999987 33344443322 46677899987666 77777643
No 287
>PLN02590 probable tyrosine decarboxylase
Probab=99.40 E-value=5e-11 Score=113.29 Aligned_cols=202 Identities=11% Similarity=0.052 Sum_probs=140.7
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEeCCHHHHHHHHHHHhcC------
Q 020968 64 ASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-----PDDVYLTLGCTQAIEVILTVLAR------ 132 (319)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~~~~G~t~ai~~~~~~l~~------ 132 (319)
+..+-+.+...+.... ..|...+...++++.+.+++.+.+|.+-. ...-++++|+++++..++.+...
T Consensus 144 ~~~lgd~l~sa~n~~~-~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~ 222 (539)
T PLN02590 144 AGFLGEMLNAGLSVVG-FTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKV 222 (539)
T ss_pred HHHHHHHHHHhccccc-CCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhh
Confidence 3444455555544332 24555667889999999999998875522 13457789999988776654321
Q ss_pred -----CCCEEEEcCCCCcchHHHHhhCCC---eEEEEeccCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCcccc
Q 020968 133 -----PGANILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGN 198 (319)
Q Consensus 133 -----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~ 198 (319)
+.-.|++.+-.|.+..+.++.+|+ .++.++++..+++.+|++.|++++.+ .+.+|+.+..+..||.
T Consensus 223 g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGa 302 (539)
T PLN02590 223 GKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAA 302 (539)
T ss_pred cccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcc
Confidence 112455677889899999999998 47888886556789999999998853 2455666666889999
Q ss_pred ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC-CCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968 199 VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV-PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (319)
Q Consensus 199 ~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~ 272 (319)
+ +++++|.++|+++|+|+.+|.||+.+..--.+.. -+..+.. -.=+.-+++|++ ....-+|.+++.++
T Consensus 303 i---Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~--ADSit~D~HK~l-~~p~~cg~llvr~~ 371 (539)
T PLN02590 303 V---DPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIEN--ADSFNMNAHKWL-FANQTCSPLWVKDR 371 (539)
T ss_pred c---CCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCcc--CCEEEECchhhc-CcCcCEEEEEecCH
Confidence 9 8899999999999999999999998652111111 1111111 124455899994 66677898888764
No 288
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.39 E-value=7.7e-11 Score=110.69 Aligned_cols=255 Identities=14% Similarity=0.071 Sum_probs=145.7
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCc-EEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDD-VYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~-i~~~~G~t~ 121 (319)
.+..++||..|--...- =--.|.+.+++.+++........ .....+.+..+++.+.+..+....... +++++++++
T Consensus 37 dG~~ylD~~~g~~~~~l-Gh~~p~i~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsE 113 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLAL-GHNHPNMKQKILDYLQSGLPLHT--LDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGAD 113 (442)
T ss_pred CCCEEEEccccHhhhcC-CCCCHHHHHHHHHHHHhccCccc--cccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHH
Confidence 46778888777422111 13467899999998876331111 111235555666666553321101124 455689999
Q ss_pred HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCCC--Cc----CCH----HHH
Q 020968 122 AIEVILTVLAR--PGANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAKG--WE----VDL----DAV 176 (319)
Q Consensus 122 ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~----~d~----~~l 176 (319)
|+..+++.... ...+|+....+|++....+.. .+. .+..++...... +. .+. +.+
T Consensus 114 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (442)
T TIGR00709 114 AVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYF 193 (442)
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHH
Confidence 99999886432 236788888888776433332 220 122222211000 00 011 113
Q ss_pred Hhhhc------cCceEEEEcCCC-CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968 177 EALAD------ENTVALVIINPG-NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (319)
Q Consensus 177 ~~~l~------~~~~~v~l~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~ 249 (319)
++.+. +++.++++.... |+...+++.+.++++.++|+++|+++|.||++.+|...|.. .....+.-.+.++
T Consensus 194 ~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~-~a~~~~gv~PDiv- 271 (442)
T TIGR00709 194 ENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTM-FAFEHAGIEPDFV- 271 (442)
T ss_pred HHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHHcCCCCcEE-
Confidence 33332 345566666554 44445689999999999999999999999999998766632 2222233222334
Q ss_pred EecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH-hhhhcCCcchHHHHHHHHHH--hcccccc
Q 020968 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS-FLNISSDPATFIQFLKSSRK--LKRNSFL 314 (319)
Q Consensus 250 ~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l--~~~~~~~ 314 (319)
+ ++|.++. |+++|++++++ + ...+.. ....+.+.+++++.++..++ ++++++.
T Consensus 272 ~--~gK~l~~-G~Pigav~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~ 327 (442)
T TIGR00709 272 V--MSKAVGG-GLPLAVLLIAP--------E-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLA 327 (442)
T ss_pred E--EcccccC-CcccEEEEEch--------H-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHH
Confidence 3 7999876 89999999853 2 222211 12234567888887777765 3344443
No 289
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.38 E-value=6.3e-11 Score=104.15 Aligned_cols=200 Identities=18% Similarity=0.217 Sum_probs=121.7
Q ss_pred HHHHHHHHHHhhcC----CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe---CCHHHHHHHHHHHhcCCCCEE
Q 020968 65 SVAVDAIVHSVRSA----RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT---LGCTQAIEVILTVLARPGANI 137 (319)
Q Consensus 65 ~~~~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~---~G~t~ai~~~~~~l~~~gd~V 137 (319)
..+++|+++.--+. ....|+.. +.=|+.+-+.+.+.+ ..+..++- .++|+||..++.++++|||++
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~---D~GRd~le~iyA~vf----gaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~l 99 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYD---DIGRDKLERIYADVF----GAEDALVRPQFVSGTHAIALALFGVLRPGDEL 99 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT----HHHHHHHHHHHHHC----T-SEEEEETTS-SHHHHHHHHHHHH--TT-EE
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCC---CccHHHHHHHHHHHh----CchhhhhcccccchHHHHHHHHHhcCCCCCeE
Confidence 45667776542221 12345431 233445555554433 34555553 468999999999999999999
Q ss_pred EE-cCCCCcchHHHH----------hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC-CCccccccCHHHH
Q 020968 138 LL-PRPGFPYYEARA----------THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP-GNPCGNVYTYQHL 205 (319)
Q Consensus 138 l~-~~p~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p-~nptG~~~~~~~l 205 (319)
+. +..-|.....+. +..|+....+++.++ ..+|++.+++++++++++|++... ..-+=..++.+++
T Consensus 100 l~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~d--g~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I 177 (403)
T PF06838_consen 100 LSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTED--GTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEI 177 (403)
T ss_dssp EESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TT--SSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHH
T ss_pred EEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCC--CCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHH
Confidence 85 557777766665 566788888888654 469999999999999999998854 4455567888999
Q ss_pred HHHHHHHHHc--CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC-cceeeEEEeeCCCCCccchHHH
Q 020968 206 QKIAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSDPNGILQDSGIV 282 (319)
Q Consensus 206 ~~i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~ 282 (319)
++++++.|+. ++++++|++|++|+-..++ . .... .++.+|+-|.-|.. .---||+++. .+++
T Consensus 178 ~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP-~---~vGA---Dl~aGSLIKNpGGgiAptGGYIaGr--------~~lV 242 (403)
T PF06838_consen 178 KEIIKFVKEINPDVIIFVDNCYGEFVETQEP-T---EVGA---DLMAGSLIKNPGGGIAPTGGYIAGR--------KDLV 242 (403)
T ss_dssp HHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G-G---GGT----SEEEEETTSGGGTTT-SS-EEEEES--------HHHH
T ss_pred HHHHHHHHhhCCCeEEEEeCCcceeccccCc-c---ccch---hheeccceeCCCCCccCcCCEEech--------HHHH
Confidence 9999999875 7899999999998844322 2 2222 39999999996543 1123888884 3577
Q ss_pred HHHHHh
Q 020968 283 DSIKSF 288 (319)
Q Consensus 283 ~~~~~~ 288 (319)
++.-..
T Consensus 243 e~~a~R 248 (403)
T PF06838_consen 243 ERAAYR 248 (403)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 765543
No 290
>PLN02263 serine decarboxylase
Probab=99.38 E-value=2.3e-10 Score=106.28 Aligned_cols=177 Identities=16% Similarity=0.005 Sum_probs=131.2
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR--PGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 165 (319)
+..++++.+-+|+.+.+|.+-+.-.=++|+|||+++..++.+-.+ +...++++.-.|.+..+.++.+|++++.++.+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d- 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL- 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence 457899999999988777542222358899999999988776643 33478889999999999999999999999985
Q ss_pred CCCCcCCHHHHHhhhccC---ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCC-----EEEEeCCCCCccCCCCCCCC
Q 020968 166 AKGWEVDLDAVEALADEN---TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGI-----MVIADEVYDHLAFGNTPFVP 237 (319)
Q Consensus 166 ~~~~~~d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~D~a~~~~~~~~~~~~~ 237 (319)
.++.+|+++|++++.++ +.+|+.+.++.++|.+ +++++|.++|+++|+ |+.+|.||+++...-....+
T Consensus 209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~ 284 (470)
T PLN02263 209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP 284 (470)
T ss_pred -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence 45689999999988643 4456667778999999 889999999999996 99999999986541101111
Q ss_pred CcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 238 MGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 238 ~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
...+... -.=+.-+.+|.. ..-..+|.++..+
T Consensus 285 ~~df~~~-vDSIsvD~HK~l-~~P~~cgvll~R~ 316 (470)
T PLN02263 285 KVTFKKP-IGSVSVSGHKFV-GCPMPCGVQITRM 316 (470)
T ss_pred ccCCCcC-ccEEEECCcccc-CCCcCEEEEEEeh
Confidence 1112111 123455899994 6567789998864
No 291
>PLN02880 tyrosine decarboxylase
Probab=99.37 E-value=3.2e-11 Score=114.20 Aligned_cols=232 Identities=10% Similarity=0.063 Sum_probs=152.0
Q ss_pred cHHHHHHHHHHHhhhc----CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhh
Q 020968 27 TVRGVLNSLLENLNKN----DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNR 102 (319)
Q Consensus 27 ~i~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 102 (319)
.+.++++.+.+.+... .+|..+.+=.+.+ .++..+-+.+...+.... ..|...+...++++.+.+++.+
T Consensus 61 ~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~------~~~~~lad~l~~~~n~~~-~~~~~sp~~~~lE~~vi~wl~~ 133 (490)
T PLN02880 61 TLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNS------SVAGFLGEMLSAGLNIVG-FSWITSPAATELEMIVLDWLAK 133 (490)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCC------cHHHHHHHHHHHhhccCC-cccccCcccHHHHHHHHHHHHH
Confidence 4555665555544222 2344444433332 223444444444443322 2344455778999999999998
Q ss_pred hCCCCCCC-----CcEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCCcchHHHHhhCCCe---EEEEec
Q 020968 103 DLPYKLSP-----DDVYLTLGCTQAIEVILTVLAR-----------PGANILLPRPGFPYYEARATHSHLE---VRHFDL 163 (319)
Q Consensus 103 ~~g~~~~~-----~~i~~~~G~t~ai~~~~~~l~~-----------~gd~Vl~~~p~~~~~~~~~~~~g~~---~~~~~~ 163 (319)
.+|.+-.. ..-++|+|+|+++..++.+..+ +.-.|++.+-.|.+..+.+..+|+. ++.|+.
T Consensus 134 l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~ 213 (490)
T PLN02880 134 LLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKT 213 (490)
T ss_pred HhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeec
Confidence 87754221 2467889999998776654321 1124556778899999999999995 678888
Q ss_pred cCCCCCcCCHHHHHhhhcc------CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC-C
Q 020968 164 LPAKGWEVDLDAVEALADE------NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF-V 236 (319)
Q Consensus 164 ~~~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~ 236 (319)
+..+++.+|++.|++.+.+ .+.+|+.+-.+..||.+ .++++|+++|+++|+|+++|.||+.+..--... .
T Consensus 214 d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai---Dpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~ 290 (490)
T PLN02880 214 DSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV---DPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRH 290 (490)
T ss_pred CCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc---CcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHH
Confidence 7656789999999998853 24456666668899999 559999999999999999999999864311010 0
Q ss_pred CCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 237 PMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 237 ~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
.+..+. .-.-+..+++|++ .....+|.+.+.+
T Consensus 291 ~l~gie--~aDSit~d~HKwl-~~P~~~g~llvr~ 322 (490)
T PLN02880 291 YIDGVE--EADSFNMNAHKWF-LTNFDCSLLWVKD 322 (490)
T ss_pred HhcCch--hcCEEEECchhhc-CCCccEEEEEEeC
Confidence 111111 1126777999995 6667789998875
No 292
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.35 E-value=2.6e-11 Score=117.41 Aligned_cols=189 Identities=14% Similarity=0.085 Sum_probs=131.1
Q ss_pred CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (319)
Q Consensus 85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 164 (319)
+..-..+..+..|+.++ .....++++|+|.++..++.+++.+||+|++...+|.+....+...|+.++++...
T Consensus 193 ~~G~i~eAe~~AA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~ 265 (714)
T PRK15400 193 HSGPHKEAEEYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPT 265 (714)
T ss_pred CChHHHHHHHHHHHHhC-------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEeccc
Confidence 34334566777777663 24578999999999999999999999999999999999888999999999988754
Q ss_pred CCCCC----cCC-----HHHHHhhhccC-----ceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc-
Q 020968 165 PAKGW----EVD-----LDAVEALADEN-----TVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA- 229 (319)
Q Consensus 165 ~~~~~----~~d-----~~~l~~~l~~~-----~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~- 229 (319)
. +.+ .++ .+.+++.+... ++.+++++|+ -.|.+++ +++|++.|+.++ |++||||+.+.
T Consensus 266 r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~ 338 (714)
T PRK15400 266 R-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTN 338 (714)
T ss_pred c-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCCC--EEEEccchhhhc
Confidence 3 233 234 78888887542 2268888884 5799976 677788887776 68999999753
Q ss_pred CCCC--CCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968 230 FGNT--PFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 230 ~~~~--~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 291 (319)
|... +..++..- .+++.++++.|.+|. ++|+.-+.++.-+. ...+..+.+.+..+.++
T Consensus 339 F~p~~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~LHvkg--~vd~~~~n~a~~m~~ST 399 (714)
T PRK15400 339 FSPIYEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMIHVKG--DVNEETFNEAYMMHTTT 399 (714)
T ss_pred cCcccCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHHHHcC--CCCHHHHHHHHHHHcCC
Confidence 3321 11222211 122457999999999 67776666543322 23334555555555554
No 293
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.34 E-value=2e-10 Score=107.41 Aligned_cols=222 Identities=17% Similarity=0.139 Sum_probs=129.8
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCC-cEEE-eCCHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPD-DVYL-TLGCT 120 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~-~~G~t 120 (319)
.+..++||..|--.... ---+|.+.+++++++...... ... ....+.+..+++.+.+....+-..+ .+++ +++++
T Consensus 37 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~-~~~-~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGs 113 (425)
T PRK09264 37 DGKEYIDFFAGAGALNY-GHNNPVLKQALIDYLQRDGIT-HGL-DMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGT 113 (425)
T ss_pred CCCEeeecccchhhccC-CCCCHHHHHHHHHHHHhcccc-ccc-ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHH
Confidence 36678888777422111 134688999999888752211 111 1122444555555544211011122 5656 58999
Q ss_pred HHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCCCCc-CCHHHHHhhhcc--
Q 020968 121 QAIEVILTVLAR--PGANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKGWE-VDLDAVEALADE-- 182 (319)
Q Consensus 121 ~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~~-~d~~~l~~~l~~-- 182 (319)
+|+..+++.... ...+|+....+|++....+... +. .+..++........ -|++.+++.+..
T Consensus 114 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~ 193 (425)
T PRK09264 114 NAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSS 193 (425)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhcc
Confidence 999999886532 2367888888887754322211 10 12233321100000 256777777742
Q ss_pred ----CceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc
Q 020968 183 ----NTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW 257 (319)
Q Consensus 183 ----~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~ 257 (319)
+..+|++.......|. +++.+.+++|.++|++||+++|+||++.++...|..+ ....+.-.+.+ .+++|.+
T Consensus 194 ~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~~v~PDi---~t~~K~l 269 (425)
T PRK09264 194 SGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERAGITPDI---VTLSKSI 269 (425)
T ss_pred CCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhcCCCCCE---EEecccc
Confidence 2345555544555675 6788899999999999999999999998875544321 11112212223 3668998
Q ss_pred CCCcceeeEEEeeC
Q 020968 258 IVPGWRLGWLVTSD 271 (319)
Q Consensus 258 ~~~G~r~G~i~~~~ 271 (319)
+..|+++|++++++
T Consensus 270 ~~~G~pigav~~~~ 283 (425)
T PRK09264 270 SGYGLPMALVLIKP 283 (425)
T ss_pred CCCccceEEEEEch
Confidence 76699999999864
No 294
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.34 E-value=1.7e-11 Score=112.97 Aligned_cols=189 Identities=15% Similarity=0.059 Sum_probs=124.4
Q ss_pred CCeEeccCCCCCCCCCCCCcHH-HHHHHHHHhhcCCCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC-CHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASV-AVDAIVHSVRSARFNCYSS--TVGILPARRAIADYLNRDLPYKLSPDDVYLTL-GCT 120 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~-~~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~-G~t 120 (319)
+...+|+.|- ..+++. +++++.+...... ++++ ..-+.+.|+.++++++ .. +.++|++++ ++|
T Consensus 11 ~~~~~f~~Gp------~~~~~~~v~~a~~~~~~~~~--hr~~~f~~~~~~~r~~l~~l~~----~~-~~~~v~~~~gs~T 77 (378)
T PRK03080 11 PADPRFSSGP------CKKRPGWQLEALADALLGRS--HRQKPVKALLKRVIEGTRELLS----LP-EGYEVGIVPGSDT 77 (378)
T ss_pred CCCCCcCCCC------cCCChHHHHHHHHhhhcccC--cCCHHHHHHHHHHHHHHHHHhC----CC-CCceEEEECCchH
Confidence 3345566665 245566 9998886543211 2222 2234566666776662 11 345788875 899
Q ss_pred HHHHHHHHHhcCC-CCEEEEcCCCCcc-hHH-HHhhCCC-eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc
Q 020968 121 QAIEVILTVLARP-GANILLPRPGFPY-YEA-RATHSHL-EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196 (319)
Q Consensus 121 ~ai~~~~~~l~~~-gd~Vl~~~p~~~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt 196 (319)
.+++.++.++.++ ++.|+. .-.|.. +.. .++..|. ++..++.+ .+..+|+++++. ++.|.+++..|.|
T Consensus 78 ~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~-----~~~V~~~h~~t~t 149 (378)
T PRK03080 78 GAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF-----DRDVVFTWNGTTT 149 (378)
T ss_pred HHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC-----CCCEEEEecCCcc
Confidence 9999999999874 444444 445543 333 3356788 88888764 333567666432 4568899999999
Q ss_pred ccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCC-CcceeeEEEee
Q 020968 197 GNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTS 270 (319)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~ 270 (319)
|...+ +++|++ +++|+++++|.+++. +..+..+..+ .+++.|..|+++. +| +|++.+.
T Consensus 150 G~~~p---i~~I~~--~~~g~~~vVDa~qs~----G~~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~ 208 (378)
T PRK03080 150 GVRVP---VARWIG--ADREGLTICDATSAA----FALPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILS 208 (378)
T ss_pred ceecc---chhhcc--ccCCCeEEEeccccc----ccCCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEEC
Confidence 99977 666666 778999999999887 3334444432 3899999999765 56 6777664
No 295
>PLN02271 serine hydroxymethyltransferase
Probab=99.34 E-value=1.1e-09 Score=102.79 Aligned_cols=207 Identities=14% Similarity=0.085 Sum_probs=137.1
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCC------CCCcCCHHHHHHHHHHHhhhCCCCCC-C-CcEEEe
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCY------SSTVGILPARRAIADYLNRDLPYKLS-P-DDVYLT 116 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~-~-~~i~~~ 116 (319)
..-|+|-..+ -.+.+.+.+++-..+......+| +.....++++....++..+.+|.... . .+|-..
T Consensus 148 ~~~l~LIASE------N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~ 221 (586)
T PLN02271 148 FKGIELIASE------NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY 221 (586)
T ss_pred hcCeeecccc------ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec
Confidence 4566776555 24568888887665544332233 33334557776666776666653321 1 344444
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---------HHhhCCCeEEEEe--ccCCCCCcCCHHHHHh-hhccCc
Q 020968 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEA---------RATHSHLEVRHFD--LLPAKGWEVDLDAVEA-LADENT 184 (319)
Q Consensus 117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~---------~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~-~l~~~~ 184 (319)
+++.|+.+++.++++|||+|+..+..|.++.. .+...|..+..++ .++ +...+|.+++++ +...++
T Consensus 222 -SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~-~~g~IDyd~lek~a~~~rP 299 (586)
T PLN02271 222 -SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNP-QTGYIDYDKLEEKALDFRP 299 (586)
T ss_pred -cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccccc-ccCccCHHHHHHHhhhcCC
Confidence 67888999999999999999998877765432 2234565544444 433 345799999998 567789
Q ss_pred eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccC-CCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF-GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (319)
Q Consensus 185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r 263 (319)
++|++....+| ..++ ++++.++|+++|+++++|.++..-.. .+..+.++. . -.++.+|.+|++ .|-|
T Consensus 300 KLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~-~----aDvvt~TTHKtL--rGPr 367 (586)
T PLN02271 300 KILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD-Y----CDIVTSTTHKSL--RGPR 367 (586)
T ss_pred eEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc-C----CcEEEeCCcccC--CCCC
Confidence 99998877888 4444 88889999999999999999986433 222222222 1 238999999995 5556
Q ss_pred eeEEEeeC
Q 020968 264 LGWLVTSD 271 (319)
Q Consensus 264 ~G~i~~~~ 271 (319)
-|.+.+.+
T Consensus 368 GG~I~~r~ 375 (586)
T PLN02271 368 GGIIFYRK 375 (586)
T ss_pred ceEEEecc
Confidence 68888743
No 296
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.32 E-value=1.2e-10 Score=112.77 Aligned_cols=188 Identities=15% Similarity=0.083 Sum_probs=128.5
Q ss_pred CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968 85 STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (319)
Q Consensus 85 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 164 (319)
+..-..+..+.+|+.++ .....++++|+|.++..++.+++.+||+|++...+|.+....+...|+.++++...
T Consensus 193 ~~G~i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~ 265 (713)
T PRK15399 193 HTGPHLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPT 265 (713)
T ss_pred CChHHHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEeccc
Confidence 34334566677777763 24578999999999999999999999999999999999888999999999988754
Q ss_pred CCCCC----cCCH-----HHHHhhhcc-----CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEE-EEeCCCCCcc
Q 020968 165 PAKGW----EVDL-----DAVEALADE-----NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV-IADEVYDHLA 229 (319)
Q Consensus 165 ~~~~~----~~d~-----~~l~~~l~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~l-i~D~a~~~~~ 229 (319)
. +.+ .++. +.+++.+.+ +++++++++|+ -.|.+++ +++|++.| |+.+ ++||||+.+.
T Consensus 266 ~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd---~~~I~~~~---g~~~ilvDEAhgah~ 337 (713)
T PRK15399 266 R-NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYN---TDWIKQTL---DVPSIHFDSAWVPYT 337 (713)
T ss_pred c-cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeC---HHHHHHHh---CCCEEEEeccchhhh
Confidence 3 233 2344 888888753 23578889884 5799977 55666666 4555 6999999743
Q ss_pred -CCCC-C-CCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968 230 -FGNT-P-FVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 230 -~~~~-~-~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 291 (319)
|... + ..++... ..+..++++.|.+|. ++++.-+.++.-+. ...+..+.+.+..+.++
T Consensus 338 ~F~p~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iHvk~--~vd~~~~n~a~~m~~ST 399 (713)
T PRK15399 338 HFHPIYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIHIKG--EYDEETFNEAFMMHTST 399 (713)
T ss_pred hcCcccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeeeecC--CCCHHHHHHHHHHHcCC
Confidence 3221 1 1222211 123345779999999 67777776654332 23344555556555554
No 297
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.32 E-value=3.4e-10 Score=106.31 Aligned_cols=256 Identities=15% Similarity=0.126 Sum_probs=144.8
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|--..... --.|.+.+++.++++.... +.......+....+++.+.+..+.. ..+.+++++++++|
T Consensus 40 dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p~~-~~~~v~f~~SGseA 115 (445)
T PRK08593 40 DGKTYIDLLASASSQNVG-HAPPRVVEAIKAQADKFIH--YTPAYMYHEPLVRLAKKLCELAPGD-FEKRVTFGLSGSDA 115 (445)
T ss_pred CCCEEEECCccHHhhcCC-CCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHH
Confidence 366788887663221111 2468999999998876432 1111112234444555554432211 12589999999999
Q ss_pred HHHHHHHhcC-C-CCEEEEcCCCCcchHHHHh-hCCC-------------eEEEEeccCCCC--Cc-CC-------HHHH
Q 020968 123 IEVILTVLAR-P-GANILLPRPGFPYYEARAT-HSHL-------------EVRHFDLLPAKG--WE-VD-------LDAV 176 (319)
Q Consensus 123 i~~~~~~l~~-~-gd~Vl~~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~--~~-~d-------~~~l 176 (319)
+..+++.... . ..+|+.....|++....+. ..+. .+..++...... +. .+ ++.+
T Consensus 116 ~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 195 (445)
T PRK08593 116 NDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPL 195 (445)
T ss_pred HHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHH
Confidence 9999885421 2 3578888888876532222 1111 122233211100 00 01 1344
Q ss_pred Hhhhc-----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968 177 EALAD-----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (319)
Q Consensus 177 ~~~l~-----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~ 250 (319)
++.+. ++..+|++.......|.+ .+.+-++++.++|+++|+++|+||++..+...|... ....+.-.+. +
T Consensus 196 ~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a~~~~gv~pD---i 271 (445)
T PRK08593 196 KEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-SISHFNITPD---L 271 (445)
T ss_pred HHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-HHHhcCCCCC---E
Confidence 44332 345566666666677875 688889999999999999999999998875544321 1111221122 2
Q ss_pred ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh-hcCCcchHHHHHHHHHH--hccccccc
Q 020968 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN-ISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
-+++|.++ .|+++|+++++. ++.+.+..... .+...+++...+....+ ++++++.+
T Consensus 272 ~t~gK~l~-~G~p~gav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~ 330 (445)
T PRK08593 272 MSFGKSLA-GGMPMSAIVGRK--------EIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQ 330 (445)
T ss_pred eeeccccc-CCcccEEEEEcH--------HHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 37899975 679999999853 46665542221 23445666666554443 34444433
No 298
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.31 E-value=9.2e-10 Score=103.89 Aligned_cols=206 Identities=14% Similarity=0.081 Sum_probs=124.2
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE---
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYL--- 115 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--- 115 (319)
.+-|+|-..+ -...+.+.+++...+......+ |+-...++++++...+...+.++ ...+.+.+
T Consensus 34 ~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~ 105 (475)
T PLN03226 34 WKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQ 105 (475)
T ss_pred HcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecC
Confidence 5667776665 2567888888888773322112 22233445665544444444333 23344433
Q ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCC---CCcchHHHH---hhCCCeEE----EEeccCCCCCcCCHHHHHhhhcc-Cc
Q 020968 116 TLGCTQAIEVILTVLARPGANILLPRP---GFPYYEARA---THSHLEVR----HFDLLPAKGWEVDLDAVEALADE-NT 184 (319)
Q Consensus 116 ~~G~t~ai~~~~~~l~~~gd~Vl~~~p---~~~~~~~~~---~~~g~~~~----~~~~~~~~~~~~d~~~l~~~l~~-~~ 184 (319)
..+|+.|+..++.+++++||+|+..+. .|..+.... +..+.... ++..++ ++..+|++++++.+.. ++
T Consensus 106 ~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~p 184 (475)
T PLN03226 106 PLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRP 184 (475)
T ss_pred cCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCC
Confidence 367788999999999999999998542 333322211 11122211 333333 4457999999998863 56
Q ss_pred eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC-CCCcccCCCCCeEEEecCccccCCCcce
Q 020968 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF-VPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (319)
Q Consensus 185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~~~~vi~~~s~sK~~~~~G~r 263 (319)
++|++ ..++ +|...+ +++|.++|+++|+++++|++|..-....... .++ . ...++++|++|++. |-+
T Consensus 185 klIv~-~~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~---~--~~Div~~t~hK~L~--GP~ 252 (475)
T PLN03226 185 KLIIA-GASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPF---E--YCDVVTTTTHKSLR--GPR 252 (475)
T ss_pred eEEEE-ecCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCC---C--CCeEEEecCccccc--CCC
Confidence 65554 3333 566644 7788899999999999999998644322111 111 1 12388999999963 333
Q ss_pred eeEEEeeC
Q 020968 264 LGWLVTSD 271 (319)
Q Consensus 264 ~G~i~~~~ 271 (319)
-|++++.+
T Consensus 253 Gg~I~~~~ 260 (475)
T PLN03226 253 GGMIFFRK 260 (475)
T ss_pred ceEEEEch
Confidence 38887743
No 299
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.31 E-value=3.1e-10 Score=105.68 Aligned_cols=220 Identities=16% Similarity=0.104 Sum_probs=130.1
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhC--CCCCCCCcEEE-eCCH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL--PYKLSPDDVYL-TLGC 119 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~--g~~~~~~~i~~-~~G~ 119 (319)
.+..++||..|--...- =--.|.+.+++++++...... .. .....+.+..+++.+.+.. +... .+.+++ ++++
T Consensus 33 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~-~~-~~~~~~~~~~lae~l~~~~~~~~~~-~~~~~f~~~sG 108 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNY-GHNNPKLKQALIDYLADDGII-HS-LDMATEAKREFLETFNEIILKPRGL-DYKVQFPGPTG 108 (412)
T ss_pred CCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhccce-ec-cccCcHHHHHHHHHHHHhccCccCC-CceEEEeCCCc
Confidence 36678888777422111 134688999999988642211 11 1112344555666654421 1011 124655 5899
Q ss_pred HHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHh-hCCC------------eEEEEeccCCCCC-cCCHHHHHhhhc--
Q 020968 120 TQAIEVILTVLAR--PGANILLPRPGFPYYEARAT-HSHL------------EVRHFDLLPAKGW-EVDLDAVEALAD-- 181 (319)
Q Consensus 120 t~ai~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~-~~g~------------~~~~~~~~~~~~~-~~d~~~l~~~l~-- 181 (319)
++|+..+++.... ...+|+....+|++....+. ..+. .+..+|....... .-+++.+++.+.
T Consensus 109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~ 188 (412)
T TIGR02407 109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDS 188 (412)
T ss_pred hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhc
Confidence 9999999886532 23678888888877543322 2121 1122222100000 013566777775
Q ss_pred ----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCC-CcccCCCCCeEEEecCcc
Q 020968 182 ----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVP-MGVFGSIVPVLTLGSISK 255 (319)
Q Consensus 182 ----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~~~~vi~~~s~sK 255 (319)
+++.+|++....++.|. +.+.+.+++|.++|+++|+++|+||++.++...|..... ...+.+ . ++ +++|
T Consensus 189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~P--D-i~--~~~K 263 (412)
T TIGR02407 189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEP--D-IV--CLSK 263 (412)
T ss_pred cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCC--C-EE--Eech
Confidence 23456665555778887 678888999999999999999999999877544432111 112222 2 32 5789
Q ss_pred ccCCCcceeeEEEeeC
Q 020968 256 RWIVPGWRLGWLVTSD 271 (319)
Q Consensus 256 ~~~~~G~r~G~i~~~~ 271 (319)
.++..|+++|++++++
T Consensus 264 ~lg~~G~pigav~~~~ 279 (412)
T TIGR02407 264 SISGYGLPLALTLIKP 279 (412)
T ss_pred hccCCccceeEEEEch
Confidence 9644399999999864
No 300
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.31 E-value=6.8e-12 Score=99.85 Aligned_cols=98 Identities=24% Similarity=0.431 Sum_probs=77.1
Q ss_pred CCCCeEeccCCCCCC-------------CCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCC--CC
Q 020968 43 DTRPLIPLGHGDPSA-------------FPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLP--YK 107 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~-------------~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g--~~ 107 (319)
++.++|+|+..+..+ .+.+..++.+.+++.+. ..|.+..|.++||+++++|+.+.+| ..
T Consensus 41 np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~ 114 (153)
T PLN02994 41 NPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGLANFRKAIANFMAEARGGRVK 114 (153)
T ss_pred CCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCcHHHHHHHHHHHHHHhCCCCc
Confidence 345688888876410 02234445545555442 2488888999999999999999888 67
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc
Q 020968 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY 146 (319)
Q Consensus 108 ~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~ 146 (319)
+++++|++|+|+++++..++..++++||.|+++.|+|+.
T Consensus 115 ~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 115 FDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 889999999999999999999999999999999999963
No 301
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.30 E-value=2.4e-10 Score=113.69 Aligned_cols=174 Identities=14% Similarity=0.144 Sum_probs=120.4
Q ss_pred CCCCCC---cCCHHHHHHHHHHHhhhCCCCCCCCcE-EEeCCHHHHHHHHHHHhcC--------CCCEEEEcCCCCcchH
Q 020968 81 NCYSST---VGILPARRAIADYLNRDLPYKLSPDDV-YLTLGCTQAIEVILTVLAR--------PGANILLPRPGFPYYE 148 (319)
Q Consensus 81 ~~Y~~~---~g~~~lr~~ia~~~~~~~g~~~~~~~i-~~~~G~t~ai~~~~~~l~~--------~gd~Vl~~~p~~~~~~ 148 (319)
+.|.|. .|..++...+.+++.+..|. + ++ +..+|+.+|-...+.++.. ..++|+++...|....
T Consensus 517 hPyqPe~~sqG~lq~i~elq~~l~eltGm--d--~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP 592 (939)
T TIGR00461 517 HPFQPSNQVEGYQELIAQLEKWLCSITGF--D--AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP 592 (939)
T ss_pred CCCCchHHhHHHHHHHHHHHHHHHHHHCC--C--CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence 355543 34445555556666555443 3 33 3344455555444433321 2367899999997777
Q ss_pred HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc---cCceEEEEcCCCCccccccCHHH-HHHHHHHHHHcCCEEEEeCC
Q 020968 149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEV 224 (319)
Q Consensus 149 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~a 224 (319)
..++..|++++.++.+ .++.+|+++|++.++ +++++|++++|+| +|.+ ++ +++|+++|+++|.++++|.+
T Consensus 593 asa~~~G~~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~iah~~G~~v~VDgA 666 (939)
T TIGR00461 593 ASAAMAGMQVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACDIVHSFGGQVYLDGA 666 (939)
T ss_pred HHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHHHHHHcCCEEEEEec
Confidence 8899999999999985 345799999999997 3788999999999 7887 45 99999999999999999999
Q ss_pred CCCccCCCCCCCCCcccCCCCCeEEEecCccccCC----CcceeeEEEee
Q 020968 225 YDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV----PGWRLGWLVTS 270 (319)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~----~G~r~G~i~~~ 270 (319)
+..-.. .+......+-.++++|.+|+|+. .|-.+|.+.+.
T Consensus 667 q~~al~------~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr 710 (939)
T TIGR00461 667 NMNAQV------GLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVK 710 (939)
T ss_pred ChhhCC------CCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEh
Confidence 865111 11111222234999999998763 46678998875
No 302
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.30 E-value=2.6e-10 Score=104.55 Aligned_cols=198 Identities=19% Similarity=0.141 Sum_probs=131.6
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEeCCHHHHHHHHHHHhcC-------
Q 020968 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-----PDDVYLTLGCTQAIEVILTVLAR------- 132 (319)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~~~~G~t~ai~~~~~~l~~------- 132 (319)
.-+-+.+...+... ...|...+...++++.+.+++.+.+|.+-. ...=++|+|+|+++..++.+..+
T Consensus 54 ~i~~~~l~~~~n~n-~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~ 132 (373)
T PF00282_consen 54 SILADLLASALNQN-GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSK 132 (373)
T ss_dssp HHHHHHHHHHHT-B-TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccc-ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhh
Confidence 34444555555443 335555556789999999999998886621 23568999999999877654421
Q ss_pred -CC-----C-EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc---C--ce-EEEEcCCCCccccc
Q 020968 133 -PG-----A-NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---N--TV-ALVIINPGNPCGNV 199 (319)
Q Consensus 133 -~g-----d-~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~--~~-~v~l~~p~nptG~~ 199 (319)
.| . .|++.+-.|.+..+.+..+|+.++.|++++ ++.+|+++|++.+.. + +. +|+.+..+..+|.+
T Consensus 133 ~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~ 210 (373)
T PF00282_consen 133 AKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI 210 (373)
T ss_dssp HHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB
T ss_pred hcccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc
Confidence 12 2 466667788889999999999999999875 567999999998753 2 23 45566778899999
Q ss_pred cCHHHHHHHHHHHHHcCCEEEEeCCCCCccC--CCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968 200 YTYQHLQKIAETAKKLGIMVIADEVYDHLAF--GNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (319)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~ 272 (319)
+++++|.++|+++++|+.+|.+|++..+ ..... ....+.. -.=+.-+++|+++ .-..+|+++..++
T Consensus 211 ---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~-~~~gi~~--adSit~d~HK~l~-~P~~~~~~l~r~~ 278 (373)
T PF00282_consen 211 ---DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRH-LLFGIER--ADSITIDPHKWLG-VPYGCGVLLVRDK 278 (373)
T ss_dssp ----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGG-GGTTGGG--ESEEEEETTTTTS--SSS-EEEEESSG
T ss_pred ---cCHHHHhhhccccceeeeecccccccccccccccc-ccccccc--ccccccchhhhhc-CCccceeEEeecc
Confidence 8899999999999999999999998322 11111 1111111 1134448999964 4568999988764
No 303
>PRK06541 hypothetical protein; Provisional
Probab=99.29 E-value=7.7e-10 Score=104.26 Aligned_cols=219 Identities=17% Similarity=0.172 Sum_probs=129.2
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|--.... ---.|.+.+++.+++....+ +.......+.+..+++.+.+..+ -+.+.+++++++++|
T Consensus 50 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA 124 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQV-GHGRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGSEA 124 (460)
T ss_pred CCCEEEECCccHHhccC-CCCCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCCcHHH
Confidence 46778888777321111 13358899999998876421 11111122444445555544322 124689999999999
Q ss_pred HHHHHHHhcC--------CCCEEEEcCCCCcchHHHHh-hCCC------------eEEEEeccCCCC---CcCC------
Q 020968 123 IEVILTVLAR--------PGANILLPRPGFPYYEARAT-HSHL------------EVRHFDLLPAKG---WEVD------ 172 (319)
Q Consensus 123 i~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~-~~g~------------~~~~~~~~~~~~---~~~d------ 172 (319)
+..+++.... ...+|+...-+|++....+. ..|. .+..++...... +.-+
T Consensus 125 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 204 (460)
T PRK06541 125 VESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGR 204 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHH
Confidence 9998875431 13678888888876533222 1111 112222111000 1112
Q ss_pred --HHHHHhhhc---cCceEEEEcCC-CCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968 173 --LDAVEALAD---ENTVALVIINP-GNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (319)
Q Consensus 173 --~~~l~~~l~---~~~~~v~l~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~ 245 (319)
++.+++.+. .+..+.++.-| .++.|.+.+ .+.++++.++|+++|+++|+||++.++...+... ....++-.+
T Consensus 205 ~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv~P 283 (460)
T PRK06541 205 WAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGYVP 283 (460)
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCCCC
Confidence 256676664 23345555556 888898754 7779999999999999999999997764333321 111122112
Q ss_pred CeEEEecCccccCCCcc-eeeEEEeeC
Q 020968 246 PVLTLGSISKRWIVPGW-RLGWLVTSD 271 (319)
Q Consensus 246 ~vi~~~s~sK~~~~~G~-r~G~i~~~~ 271 (319)
.++ +++|.++ .|+ ++|++++++
T Consensus 284 Div---t~gK~l~-~G~~pigav~~~~ 306 (460)
T PRK06541 284 DII---TCAKGIT-SGYSPLGAMIASD 306 (460)
T ss_pred CEE---Eeccccc-CCccceeEEEEcH
Confidence 233 4899975 786 999999854
No 304
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.28 E-value=3.4e-10 Score=103.38 Aligned_cols=241 Identities=14% Similarity=0.135 Sum_probs=146.8
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|--...- ---.|.+.++++++++.... +.+. ...+.+..+++.+.+.. ..+.+++++++++|
T Consensus 22 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~SGseA 93 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVL-GHNHPEWVEEMSEQLEKLVV--AGPM-FEHEEKEEMLEELSKWV----NYEYVYMGNSGTEA 93 (364)
T ss_pred CCCEEEEcccChhhccC-CCCCHHHHHHHHHHHHhcCC--ccCC-cCCHHHHHHHHHHHhhc----CCCEEEEeCchHHH
Confidence 46778888776422111 12347888999998876321 1111 11233444455444322 34689999999999
Q ss_pred HHHHHHHhc-CCC-CEEEEcCCCCcchHHHHhh-CC-------Ce-----EEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968 123 IEVILTVLA-RPG-ANILLPRPGFPYYEARATH-SH-------LE-----VRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (319)
Q Consensus 123 i~~~~~~l~-~~g-d~Vl~~~p~~~~~~~~~~~-~g-------~~-----~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 187 (319)
+..+++... .+| ++|+....+|++....+.. .+ .. +..++. .|++.+++.+.+++++|
T Consensus 94 ~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~~aAv 166 (364)
T PRK04013 94 VEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-------NDVEAAKEAITKETAAV 166 (364)
T ss_pred HHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-------CCHHHHHHHhcCCcEEE
Confidence 999998763 245 8899998888775432222 11 11 111111 26788888887778888
Q ss_pred EEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968 188 VIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (319)
Q Consensus 188 ~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~ 266 (319)
++.......|. ..+.+-++++.++|+++|+++|+||++.++ ..|.. .....+.-.+.++ +++|.++. |+.+|.
T Consensus 167 ivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~-~a~~~~gv~PDiv---~~gK~lgg-G~P~~a 240 (364)
T PRK04013 167 IFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKF-LAIEHYKVEPDIV---TMGKGIGN-GVPVSL 240 (364)
T ss_pred EEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCch-hHHHhcCCCCCEE---EecccccC-CceeEE
Confidence 77766655565 446677999999999999999999999987 55532 2222233223344 45999654 799999
Q ss_pred EEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH--hccccccc
Q 020968 267 LVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 267 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
++...+ + .. .....+.+.++++..+....+ ++++++.+
T Consensus 241 ~~~~~~--------~-~~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~ 280 (364)
T PRK04013 241 TLTNFD--------V-ER--GKHGSTFGGNPLACKAVAVTLRILRRERLVE 280 (364)
T ss_pred EEeccc--------c-cC--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHH
Confidence 987542 2 11 112223445666666555543 44555443
No 305
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.26 E-value=4.7e-10 Score=102.29 Aligned_cols=226 Identities=19% Similarity=0.179 Sum_probs=133.6
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE---
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYL--- 115 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~--- 115 (319)
.+-|+|-..+. .+.|.+.+++...+....... |+.....+++++...++..+.+|.. ++...+
T Consensus 20 ~~~l~LiaSEN------~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~--~~~w~anvq 91 (399)
T PF00464_consen 20 RSTLNLIASEN------YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAE--PKEWYANVQ 91 (399)
T ss_dssp HHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-S--TTTEEEE--
T ss_pred hcCccccCccc------ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCC--cccceEEee
Confidence 46688877762 456777777765554332222 2223334567666667766666543 333322
Q ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH---HHH-------hhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-Cc
Q 020968 116 TLGCTQAIEVILTVLARPGANILLPRPGFPYYE---ARA-------THSHLEVRHFDLLPAKGWEVDLDAVEALADE-NT 184 (319)
Q Consensus 116 ~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~---~~~-------~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~ 184 (319)
..+++.|+..++.+|+++||+|+..++.+.++. ... .....+.+.++++++ ...+|.+++++.+.. ++
T Consensus 92 p~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kP 170 (399)
T PF00464_consen 92 PHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHKP 170 (399)
T ss_dssp -SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH--
T ss_pred cCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcCC
Confidence 356788999999999999999998876654332 111 223456777887653 468999999998764 78
Q ss_pred eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968 185 VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (319)
Q Consensus 185 ~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r 263 (319)
++|++.....|-= -+++++.++|++.|.+++.|.+|.. ++-+|.-+.|+. .. .|+.+|.+|+ ++|-|
T Consensus 171 klIi~G~S~y~~~-----~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~-~A----Dvvt~sThKt--l~GPr 238 (399)
T PF00464_consen 171 KLIICGASSYPRP-----IDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP-YA----DVVTGSTHKT--LRGPR 238 (399)
T ss_dssp SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC-TS----SEEEEESSGG--G-SSS
T ss_pred CEEEECchhccCc-----cCHHHHHHHHHhcCcEEEecccccccceehheecCccc-cc----eEEEeecccc--ccccC
Confidence 8888776555432 3488999999999999999999984 555554444543 22 2999999999 58888
Q ss_pred eeEEEee------CCCCCccchHHHHHHHHhhhh
Q 020968 264 LGWLVTS------DPNGILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 264 ~G~i~~~------~~~~~~~~~~~~~~~~~~~~~ 291 (319)
-|.|++. ++.....++++.+++....-.
T Consensus 239 ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP 272 (399)
T PF00464_consen 239 GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFP 272 (399)
T ss_dssp -EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTT
T ss_pred ceEEEEcCCccccCCcccccHHHHHHHhccccCC
Confidence 9999986 111122235688888876543
No 306
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.26 E-value=1.2e-09 Score=100.62 Aligned_cols=247 Identities=15% Similarity=0.098 Sum_probs=147.6
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..+|||..|.....- =-..|.+.+|+++++.......+.. ...+-...+++.+....... ..+.+++++++++|
T Consensus 54 dG~~ylDf~sgi~v~~~-GH~hP~Vv~Av~~q~~~~~h~~~~~--~~~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA 129 (447)
T COG0160 54 DGNEYLDFLSGIAVLNL-GHNHPRVVEAVKRQLAKLNHTHTRD--LYYEPYVELAEKLTALAPGS-GLKKVFFGNSGAEA 129 (447)
T ss_pred CCCEEEEcccCcchhcc-CCCCHHHHHHHHHHHHHhhcccCCc--ccchhHHHHHHHHHHhCCcc-cCCeEEecCCcHHH
Confidence 46778899886432111 2457899999999887744222222 11144445555554432211 45689999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchH-HHHhhCCC-------------eEEEEeccCCC--CCcC--------CHHHH
Q 020968 123 IEVILTVLA--RPGANILLPRPGFPYYE-ARATHSHL-------------EVRHFDLLPAK--GWEV--------DLDAV 176 (319)
Q Consensus 123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~-~~~~~~g~-------------~~~~~~~~~~~--~~~~--------d~~~l 176 (319)
+..+++.-. .....|+.....|++.- ......|. .++.+|....- .+.. ..+.+
T Consensus 130 ~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~ 209 (447)
T COG0160 130 VEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYI 209 (447)
T ss_pred HHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHH
Confidence 999988643 23467888777776532 22221111 24444432211 1111 22334
Q ss_pred Hhhhc------cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968 177 EALAD------ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (319)
Q Consensus 177 ~~~l~------~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~ 249 (319)
+..+. .++.++++.......|. +.|..-++++.++|++||+++|.||++.++..+| ....+..+.-.+.+|
T Consensus 210 e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG-~~fa~E~~gv~PDiv- 287 (447)
T COG0160 210 ERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDIV- 287 (447)
T ss_pred HHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-cchhhhhcCCCCCEE-
Confidence 44332 13456666666777785 5566669999999999999999999999998877 333443333323344
Q ss_pred EecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH-hhhhcCCcchHHHHHHHHHH
Q 020968 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS-FLNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 250 ~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~q~~~~~~l 307 (319)
+++|.++. |+.+|.++... ++.+ ... ....+...++++..+....+
T Consensus 288 --t~aK~ig~-G~Pl~avv~r~--------ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL 334 (447)
T COG0160 288 --TLAKSLGG-GLPLSAVVGRA--------EIMD-WPPGGHGGTFGGNPVACAAALAVL 334 (447)
T ss_pred --EecccccC-CCceeEEeccH--------Hhcc-cCCcccCCCCCcCHHHHHHHHHHH
Confidence 67999755 99999999843 3444 222 12223455666665554433
No 307
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.25 E-value=1.1e-09 Score=104.18 Aligned_cols=183 Identities=17% Similarity=0.175 Sum_probs=126.0
Q ss_pred CCCCCcCCHHHHHHHHHHHhhhCCCC----------C-CCCcEEEeCCHHHHHHHHHHHhcC------------------
Q 020968 82 CYSSTVGILPARRAIADYLNRDLPYK----------L-SPDDVYLTLGCTQAIEVILTVLAR------------------ 132 (319)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~----------~-~~~~i~~~~G~t~ai~~~~~~l~~------------------ 132 (319)
.+...+...++++.+.+++.+..+.. . +...-++|+|+|+|+..++.+-.+
T Consensus 120 ~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~ 199 (522)
T TIGR03799 120 KIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLF 199 (522)
T ss_pred eeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccch
Confidence 44455577899999999987754310 1 112357799999988776654321
Q ss_pred --------CCCEEEEcCCCCcchHHHHhhCCC---eEEEEeccCCCCCcCCHHHHHhhhc----cCceEEEEc--CCCCc
Q 020968 133 --------PGANILLPRPGFPYYEARATHSHL---EVRHFDLLPAKGWEVDLDAVEALAD----ENTVALVII--NPGNP 195 (319)
Q Consensus 133 --------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~v~l~--~p~np 195 (319)
++..|++..-.|.+..+.++.+|+ +++.++++. ++.+|++.|++.++ .+++.++++ ..++.
T Consensus 200 ~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~ 277 (522)
T TIGR03799 200 AALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTE 277 (522)
T ss_pred hhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcC
Confidence 134688888999999999999998 688888853 46899999999885 344444444 55779
Q ss_pred cccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCC-CCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPF-VPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (319)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~ 272 (319)
||.+ .++++|+++|+++|+++++|.+|+....--... ..+..+. .-..+..|.+|++..| ..+|.+++.++
T Consensus 278 tGai---Dpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle--~aDSit~d~HK~l~~P-~g~G~llvr~~ 349 (522)
T TIGR03799 278 TGNI---DPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIE--RADSVTIDAHKQLYVP-MGAGMVLFKDP 349 (522)
T ss_pred CCCc---CCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCch--hCCEEEEChhhcCCcC-cccEEEEEeCH
Confidence 9999 569999999999999999999998643210000 0011111 1237778999985444 55888888653
No 308
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.24 E-value=4.3e-10 Score=102.35 Aligned_cols=186 Identities=12% Similarity=0.009 Sum_probs=123.3
Q ss_pred CcHHHHHHHHHHhhcCC---CCCCCCCcCCH---HHHHHHHHHHhhhCCCCCCCCcEEEeCC-HHHHHHHHHHHhcCCCC
Q 020968 63 TASVAVDAIVHSVRSAR---FNCYSSTVGIL---PARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEVILTVLARPGA 135 (319)
Q Consensus 63 ~~~~~~~a~~~~~~~~~---~~~Y~~~~g~~---~lr~~ia~~~~~~~g~~~~~~~i~~~~G-~t~ai~~~~~~l~~~gd 135 (319)
.|..+.+++.+.+.... ...|....-.+ ++-+.+.+.+.+.++.. +..++++++| +|.|+++++..+..+|+
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 56788888888776321 11222111122 33333444444444421 3346888777 99999999999998999
Q ss_pred EEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCC--CCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHH
Q 020968 136 NILLPRPGFPY--YEARATHSHLEVRHFDLLPAK--GWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAET 211 (319)
Q Consensus 136 ~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~ 211 (319)
++++...+..+ +..+++..|+ +..+..++.. +-.+++++++ ++++++.|.+++..+.||+..+ ++
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~l 150 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------EL 150 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------ee
Confidence 98877655543 5688889998 7766653221 1134555554 3457889999999999999854 55
Q ss_pred HHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 212 AKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 212 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
++.+++++++|.+.+- +..+..+..+ + +++.|..|.++.|| +|++.+++
T Consensus 151 ~~~~~~l~iVDavss~----g~~~id~~~~---d--~~~~ssqK~lgP~G--lg~l~~s~ 199 (349)
T TIGR01364 151 PDVKNAPLVADMSSNI----LSRPIDVSKF---G--LIYAGAQKNIGPAG--LTVVIVRK 199 (349)
T ss_pred cccCCCeEEEEccccc----cCccCCHHHc---c--EEEEecccccCCCc--eEEEEECH
Confidence 6667999999999987 3334444432 2 88999999998777 77777643
No 309
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.24 E-value=1.2e-10 Score=99.03 Aligned_cols=201 Identities=14% Similarity=0.085 Sum_probs=140.2
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~ 117 (319)
...+++|+.++. ..+...|++.++-++++..... .-.+....+..|+..+|++. ..++.++.+
T Consensus 66 ~k~ilnFcaNnY---LGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh--------~rED~ilyp 134 (417)
T KOG1359|consen 66 DKKILNFCANNY---LGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFH--------GREDTILYP 134 (417)
T ss_pred ccceeeeccccc---ccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHh--------CCCceEEec
Confidence 556889998883 4467788999988888765321 01122234678888888887 467899999
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCCC
Q 020968 118 GCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPG 193 (319)
Q Consensus 118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~ 193 (319)
.+..|+..++.++..|.|.|+.....|.+...-.+... + -..+|+-.++..+.+ +-++|+-...-
T Consensus 135 scfdANag~feail~pedAvfSDeLNhASIIdGirLck-r----------y~h~dv~~l~~~l~~a~k~r~klv~TDg~F 203 (417)
T KOG1359|consen 135 SCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK-R----------YRHVDVFDLEHCLISACKMRLKLVVTDGVF 203 (417)
T ss_pred cccccchHHHHHhcChhhhhhccccccchhhhhhHHHh-h----------hccchhHHHHHHHHHhhhheEEEEEeccee
Confidence 99999999999999999999888888876654444332 0 113566666655432 33444433446
Q ss_pred CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC-CCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG-SIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
...|.+.| +++|..++++||.++++||+++.+.++......-..+. +.+..|+.++++|+.| |.--||..+|.
T Consensus 204 SMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~ 277 (417)
T KOG1359|consen 204 SMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPK 277 (417)
T ss_pred ccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCCh
Confidence 78898854 99999999999999999999998877643322222222 2345688999999976 33349999976
No 310
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.24 E-value=4.6e-10 Score=104.89 Aligned_cols=189 Identities=15% Similarity=0.133 Sum_probs=134.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCC
Q 020968 88 GILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAK 167 (319)
Q Consensus 88 g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 167 (319)
-..+..+..|+.+. .....++++|++.|+..+.++++.+||+|+++.++|.+....+...|+..+++......
T Consensus 71 ~i~eAqe~aA~~fg-------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np 143 (557)
T COG1982 71 PIKEAQELAARVFG-------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP 143 (557)
T ss_pred cHHHHHHHHHHHhC-------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence 35677777777773 24478999999999999999999999999999999999888888999998888764433
Q ss_pred C----CcCCHHHHHhhhcc--Cc-eEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcc
Q 020968 168 G----WEVDLDAVEALADE--NT-VALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGV 240 (319)
Q Consensus 168 ~----~~~d~~~l~~~l~~--~~-~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 240 (319)
. .+++.+.+++.+.+ .. +++++++|+. .|++++ +++|++++++.++++.+|+++..... -.+..+- +
T Consensus 144 ~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~-~~~~l~~-~ 217 (557)
T COG1982 144 LYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFD-FSPMLPE-S 217 (557)
T ss_pred cccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCccccc-ccccCcc-h
Confidence 2 35689999887643 23 6778888764 688876 88888999999999999999986432 1111111 1
Q ss_pred cCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh
Q 020968 241 FGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI 291 (319)
Q Consensus 241 ~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 291 (319)
-.....+++..|.+|. ++++.-+.++....+...+++.+.+.+..+.++
T Consensus 218 ~~~~~~~~~tqS~HK~--l~alSQaS~iHv~~~~~~~~~r~nea~~~h~ST 266 (557)
T COG1982 218 ALNGGADFVTQSTHKL--LAALSQASMIHVKDGRAVNHERFNEALMMHQST 266 (557)
T ss_pred hhhcCceEEEechhhh--hhhhhhhHHHhhCCCccCCHHHHHHHHHHHccC
Confidence 1224568999999999 455555555433321233334555555555554
No 311
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.22 E-value=1.9e-09 Score=95.61 Aligned_cols=232 Identities=17% Similarity=0.162 Sum_probs=152.6
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
.+.|+|=.-+ -...+.+.+++-..+..... ..|+-....+++++...++.++.+|. +..++=..+|
T Consensus 26 ~~~ieLIASE------N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga--~~anVQPhSG 97 (413)
T COG0112 26 REHIELIASE------NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGA--EYANVQPHSG 97 (413)
T ss_pred hhceeeeecc------ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCC--CccccCCCCc
Confidence 3566665554 24568888888766654322 23444555678888877888777764 3445555555
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---HHhhCC--CeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCC
Q 020968 119 CTQAIEVILTVLARPGANILLPRPGFPYYEA---RATHSH--LEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINP 192 (319)
Q Consensus 119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~---~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p 192 (319)
++|+.+++.++.+|||+|+-.+..+.++.. -....| .+.+.+++++ +...+|.|++++...+ +|++|+....
T Consensus 98 -s~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~-et~~IDyD~~~k~a~e~kPK~ii~G~S 175 (413)
T COG0112 98 -SQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDP-ETGLIDYDEVEKLAKEVKPKLIIAGGS 175 (413)
T ss_pred -hHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccccc-ccCccCHHHHHHHHHHhCCCEEEECcc
Confidence 668888999999999999988766644321 122233 3555666654 3458999999997754 6777776554
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
..|- . -+++++.++|++.|.++++|.+|.. ++-+|.-+.|+.. . -|+.+|.+|+ ++|-|-|.|++.+
T Consensus 176 aY~r--~---id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-A----dvVTtTTHKT--lrGPrGG~Il~~~ 243 (413)
T COG0112 176 AYSR--P---IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-A----DVVTTTTHKT--LRGPRGGIILTND 243 (413)
T ss_pred cccc--c---cCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-c----ceEeCCcccC--CCCCCceEEEecc
Confidence 4442 2 2389999999999999999999984 5555544444332 2 2899999999 5888889998864
Q ss_pred CCCCccchHHHHHHHHhhhhcCCcchHHHHHHHH
Q 020968 272 PNGILQDSGIVDSIKSFLNISSDPATFIQFLKSS 305 (319)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~ 305 (319)
+++.+++.+..-...-..+..-.+++.
T Consensus 244 -------eel~kkin~aVFPg~qggpl~HviAak 270 (413)
T COG0112 244 -------EELAKKINSAVFPGLQGGPLMHVIAAK 270 (413)
T ss_pred -------HHHHHHhhhhcCCccCCChHHHHHHHH
Confidence 357788777554332334444444333
No 312
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.22 E-value=4.8e-10 Score=99.05 Aligned_cols=220 Identities=19% Similarity=0.196 Sum_probs=152.6
Q ss_pred CCCCCCcHHHHHHHHHHhhcCCC------CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc
Q 020968 58 FPSFRTASVAVDAIVHSVRSARF------NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA 131 (319)
Q Consensus 58 ~~~~~~~~~~~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~ 131 (319)
|....-.|.+.+|+.+.+++... +--+...-..+|++.+|++.+ .+..++.++..-|....+..|.
T Consensus 181 YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--------K~aALlFsSCfVANDstLftLa 252 (570)
T KOG1360|consen 181 YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--------KEAALLFSSCFVANDSTLFTLA 252 (570)
T ss_pred cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--------CcceeeeeeeeeccchHHHHHH
Confidence 34456779999999988876321 111223345789999999984 3444444454445444444442
Q ss_pred --CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----CceEEEEcCCCCccccccCHHHH
Q 020968 132 --RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE----NTVALVIINPGNPCGNVYTYQHL 205 (319)
Q Consensus 132 --~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l 205 (319)
-||..|....-.|.+.....+..+..-..+.- -|++.|++++.. -+++|.+...+..+|.+- ++
T Consensus 253 k~lpgcei~SD~gNHASMI~GIrns~v~K~IFrH-------ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavc---pl 322 (570)
T KOG1360|consen 253 KKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH-------NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVC---PL 322 (570)
T ss_pred HHCCCcEEeccccchHHHHHHhhhcCCcceeecc-------CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcC---CH
Confidence 28999988889998888888888887666653 288888888753 468888999999999994 49
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc-CCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH
Q 020968 206 QKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF-GSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (319)
Q Consensus 206 ~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 284 (319)
++|++++++||.+-++||++.-..|+.+.-..-..- ....-.|+.+++.|+||.-| |||.+.. .+++-
T Consensus 323 eelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~--------~LvDm 391 (570)
T KOG1360|consen 323 EELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATR--------KLVDM 391 (570)
T ss_pred HHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhh--------hHHHH
Confidence 999999999999999999998666653321110000 01112388999999999988 9998743 48888
Q ss_pred HHHhhh-h---cCCcchHHHHHHHHH
Q 020968 285 IKSFLN-I---SSDPATFIQFLKSSR 306 (319)
Q Consensus 285 ~~~~~~-~---~~~~~~~~q~~~~~~ 306 (319)
++.+.. . ++.++.++.-|++.+
T Consensus 392 iRSyAaGFIFTTSLPP~vl~GAleaV 417 (570)
T KOG1360|consen 392 IRSYAAGFIFTTSLPPMVLAGALEAV 417 (570)
T ss_pred HHHhcCceEEecCCChHHHHhHHHHH
Confidence 888764 1 445566666665554
No 313
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.22 E-value=8.8e-10 Score=100.82 Aligned_cols=185 Identities=11% Similarity=0.028 Sum_probs=122.4
Q ss_pred CCCcHHHHHHHHHHhhcC--------CCCCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcEEEe-CCHHHHHHHHHHH
Q 020968 61 FRTASVAVDAIVHSVRSA--------RFNCYSST--VGILPARRAIADYLNRDLPYKLSPDDVYLT-LGCTQAIEVILTV 129 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~--------~~~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~-~G~t~ai~~~~~~ 129 (319)
-..++.+++++.+.+... ...++.+. .-+.+.++.+++++ +.. +..+++++ ++++.++..++..
T Consensus 12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~----~~~-~~~~v~~~~gsgt~~~Ea~~~n 86 (360)
T PRK05355 12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELL----NIP-DNYKVLFLQGGASLQFAMVPMN 86 (360)
T ss_pred CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCcEEEEEcCCchHHHHHHHHh
Confidence 367899999998876321 11122221 12344555555555 321 23356555 6689999999999
Q ss_pred hcCCCCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHh-hhccCceEEEEcCCCCccccccCHHHHH
Q 020968 130 LARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEA-LADENTVALVIINPGNPCGNVYTYQHLQ 206 (319)
Q Consensus 130 l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~v~l~~p~nptG~~~~~~~l~ 206 (319)
++.+|+++++......+ +...++..|.. ..+...+..+ ..+..++++ .++++++.|.+++..+.||+..+ ++.
T Consensus 87 l~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g-~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~ 162 (360)
T PRK05355 87 LLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDG-FTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELP 162 (360)
T ss_pred cCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccC-CCCCCChhhccCCCCCCEEEEccCCCcceEecC--ccc
Confidence 99999988877655543 46788888865 5555433233 234444444 67778899999999999999974 355
Q ss_pred HHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeC
Q 020968 207 KIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 207 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
++ +|+++++|.+.+. +..+..+..+ + +++.|..|.++.|| +|.+.+++
T Consensus 163 ~i------~g~l~vVDavss~----g~~~idv~~~---d--~~~~ssqK~lgP~G--lg~l~~s~ 210 (360)
T PRK05355 163 DT------GDVPLVADMSSDI----LSRPIDVSKF---G--LIYAGAQKNIGPAG--LTIVIVRE 210 (360)
T ss_pred cc------CCCcEEEEcCccc----cCccCCHHHc---c--EEEEeccccccCCc--eEEEEECH
Confidence 55 7999999999987 3334444433 2 88999999998666 67776644
No 314
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.21 E-value=5.7e-09 Score=98.00 Aligned_cols=247 Identities=17% Similarity=0.130 Sum_probs=139.0
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+..++|+..|.-...-. --.|.+.+++.+++..... +.......+....+|+.+.+..+.. ..+.+++++++++|+
T Consensus 53 G~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~~-~~~~v~f~~SGsEA~ 128 (441)
T PRK05769 53 GNVYLDFNAGIAVTNVG-HAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPGG-FEKKVFFTNSGTESN 128 (441)
T ss_pred CCEEEECCCchhhcccC-CCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHH
Confidence 56677887774221111 3357899999998875322 1111112344555666665432210 136899999999999
Q ss_pred HHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCCCC--Cc-C--------CHHHH
Q 020968 124 EVILTVLA--RPGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAKG--WE-V--------DLDAV 176 (319)
Q Consensus 124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~--------d~~~l 176 (319)
..+++... ....+|+....+|++....+... +. .+..++...... |. - +.+.+
T Consensus 129 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (441)
T PRK05769 129 EAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFI 208 (441)
T ss_pred HHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHH
Confidence 99987543 12367888888887754332221 11 122222210000 00 0 12335
Q ss_pred Hh-hhc-----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968 177 EA-LAD-----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (319)
Q Consensus 177 ~~-~l~-----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~ 249 (319)
++ .++ ++..+|++.......|.+ .+.+.++++.++|+++|+++|+||++.++...|..+ ....+.-.+.++
T Consensus 209 e~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDiv- 286 (441)
T PRK05769 209 EDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDII- 286 (441)
T ss_pred HHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCEE-
Confidence 55 222 234555555445556764 467779999999999999999999999875555322 222222222233
Q ss_pred EecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhhcCCcchHHHHHHHHHH
Q 020968 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNISSDPATFIQFLKSSRK 307 (319)
Q Consensus 250 ~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l 307 (319)
+++|.++ .|+++|++++++ ++...+......+.+.+++++.++..++
T Consensus 287 --t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L 333 (441)
T PRK05769 287 --TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATL 333 (441)
T ss_pred --EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHH
Confidence 4799976 689999999854 2433222122223344677766655543
No 315
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.21 E-value=1.3e-09 Score=109.94 Aligned_cols=205 Identities=20% Similarity=0.218 Sum_probs=132.2
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCC---CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC-CHH
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLTL-GCT 120 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~-G~t 120 (319)
...|.|+. .. ...++.+...+...-.-..++.|.| ..|..++...+.+++.+..| .+++-+.. |++
T Consensus 499 ~~~i~lGs--ct----~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG----~d~~sl~~~~ga 568 (954)
T PRK05367 499 RSMIPLGS--CT----MKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITG----YDAVSLQPNAGA 568 (954)
T ss_pred cceeeCCc--CC----CcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHC----CCCEEECccHHH
Confidence 35677777 33 2445666554443211111233433 13455666666677766555 33566655 455
Q ss_pred HHHHHHHHHhc----CCCC----EEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc---CceEEEE
Q 020968 121 QAIEVILTVLA----RPGA----NILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---NTVALVI 189 (319)
Q Consensus 121 ~ai~~~~~~l~----~~gd----~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l 189 (319)
+|....+.++. ++|+ +|+++...|......+...|++++.++.+. +..+|+++|++.+++ +..+|++
T Consensus 569 ~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~--~G~iD~~~L~~~i~~~~~~la~V~i 646 (954)
T PRK05367 569 QGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDE--NGNIDLDDLRAKAEEHADNLAAIMI 646 (954)
T ss_pred HHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCC--CCCcCHHHHHHHHhccCCCeEEEEE
Confidence 55544333332 4555 699999999888888999999999999864 347999999998865 4667788
Q ss_pred cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceee
Q 020968 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLG 265 (319)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G 265 (319)
++|++-.+.. .++++|+++|+++|+++++|.++...... ......+. -.++..|.+|+|+.| |-.+|
T Consensus 647 t~pst~G~~e---~~I~eI~~i~h~~G~~v~VDgA~~~al~~---l~~pg~~G---ADi~~~s~HK~f~~P~G~GGPg~G 717 (954)
T PRK05367 647 TYPSTHGVFE---ETIREICEIVHEHGGQVYLDGANMNAQVG---LARPGDIG---ADVSHLNLHKTFCIPHGGGGPGVG 717 (954)
T ss_pred EcCCCCeeec---CCHHHHHHHHHHcCCEEEEECcChhhccC---CCChhhcC---CCEEEecCcccCCCCcCCCCCceE
Confidence 8888764444 34999999999999999999999642211 11111222 238889999998643 44578
Q ss_pred EEEee
Q 020968 266 WLVTS 270 (319)
Q Consensus 266 ~i~~~ 270 (319)
.+.+.
T Consensus 718 ~l~vr 722 (954)
T PRK05367 718 PIGVK 722 (954)
T ss_pred EEeec
Confidence 87764
No 316
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.17 E-value=5e-09 Score=99.64 Aligned_cols=255 Identities=18% Similarity=0.118 Sum_probs=143.9
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC-cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST-VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
.+..++||..|--..+.. --.|.+.+++++++..... +... .+..+....+++.+.+... ..+.+.++++++|++
T Consensus 87 dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsE 162 (504)
T PLN02760 87 NGKKYLDALAGLWCTALG-GSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSE 162 (504)
T ss_pred CCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHH
Confidence 467789988863221122 4468899999998876322 1111 1233455556666544221 113357999999999
Q ss_pred HHHHHHHHhc------C-CC-CEEEEcCCCCcchHHHH-hhCCCe------------EEEEeccCCCCCc----------
Q 020968 122 AIEVILTVLA------R-PG-ANILLPRPGFPYYEARA-THSHLE------------VRHFDLLPAKGWE---------- 170 (319)
Q Consensus 122 ai~~~~~~l~------~-~g-d~Vl~~~p~~~~~~~~~-~~~g~~------------~~~~~~~~~~~~~---------- 170 (319)
|+..+++... . ++ .+|+...-.|++....+ ...|.. +..++.. ..+.
T Consensus 163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~ 240 (504)
T PLN02760 163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP--HYWRFHLPGETEEE 240 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC--cccccCCCCCcHHH
Confidence 9999998763 1 22 57888888887643222 222221 1111110 0000
Q ss_pred ---CCHHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccC
Q 020968 171 ---VDLDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFG 242 (319)
Q Consensus 171 ---~d~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 242 (319)
...+.+++.+. ++..+|++.......|.+ .+..-++++.++|+++|+++|.||++.+|...|.... ...++
T Consensus 241 ~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~~g 319 (504)
T PLN02760 241 FSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDKYN 319 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHhcC
Confidence 01234666553 234455555445555764 4667799999999999999999999987755453221 22222
Q ss_pred CCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh--------hhhcCCcchHHHHHHHHHH--hcccc
Q 020968 243 SIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQFLKSSRK--LKRNS 312 (319)
Q Consensus 243 ~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l--~~~~~ 312 (319)
-.+. +.+++|.++...+.+|.+++.+ ++.+.+... ...+.+.++++..+..+.+ +++++
T Consensus 320 v~PD---ivtlgK~lggG~~PigAv~~~~--------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~ 388 (504)
T PLN02760 320 IKPD---LVSLAKALSSAYMPIGAVLVSP--------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERN 388 (504)
T ss_pred CCCc---EEEecccccCCccccceEeecH--------HHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 1122 3468999644335899988853 466665421 2223344566665554443 34444
Q ss_pred ccc
Q 020968 313 FLK 315 (319)
Q Consensus 313 ~~~ 315 (319)
+.+
T Consensus 389 l~~ 391 (504)
T PLN02760 389 IPE 391 (504)
T ss_pred HHH
Confidence 443
No 317
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.17 E-value=5.7e-09 Score=97.68 Aligned_cols=240 Identities=13% Similarity=0.104 Sum_probs=137.4
Q ss_pred CCCeEeccCC--CCCCCCCCCCcHHHHHHHHHHhhcCCC-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 44 TRPLIPLGHG--DPSAFPSFRTASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 44 ~~~~i~l~~g--~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
+..++||..| .... =-..|.+.+++.+++..... ..|. ..+.+..+|+.+.+..+ -..+.++++++++
T Consensus 74 G~~ylD~~~g~~~~~l---Gh~hp~v~~Av~~ql~~l~~~~~~~----~~~~~~~lAe~L~~~~p--~~~~~v~f~~SGs 144 (442)
T TIGR03372 74 GNEFIDCLGGFGIFNV---GHRNPNVIAAVENQLAKQPLHSQEL----LDPLRALLAKTLAALTP--GKLKYSFFCNSGT 144 (442)
T ss_pred CCEEEECCccHHhhhc---CCCCHHHHHHHHHHHHhCCCccccc----CCHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence 5667787766 2221 13468899999998875322 1122 23445556666554322 1236799999999
Q ss_pred HHHHHHHHHhcC----CC-CEEEEcCCCCcchHHHHhhC-CCeEE---EEeccCCCC--CcCCHHHHHhhhc------cC
Q 020968 121 QAIEVILTVLAR----PG-ANILLPRPGFPYYEARATHS-HLEVR---HFDLLPAKG--WEVDLDAVEALAD------EN 183 (319)
Q Consensus 121 ~ai~~~~~~l~~----~g-d~Vl~~~p~~~~~~~~~~~~-g~~~~---~~~~~~~~~--~~~d~~~l~~~l~------~~ 183 (319)
+|+..+++.... .| .+|+.....|++....+... +.... ..+..+.-. --.|.+.+++.++ ++
T Consensus 145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~ 224 (442)
T TIGR03372 145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD 224 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence 999999885432 23 67888888887754333222 21100 001100000 0125667766653 23
Q ss_pred ceEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc-
Q 020968 184 TVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG- 261 (319)
Q Consensus 184 ~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G- 261 (319)
..++++.......|.+. ++.-++++.++|+++|+++|+||++.++...|.. .....+.-.+.++ +++|.+ ..|
T Consensus 225 vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PDiv---t~gK~l-g~G~ 299 (442)
T TIGR03372 225 VAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPDIL---CLAKAL-GGGV 299 (442)
T ss_pred EEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCCee---eehhhh-cCCc
Confidence 45555554455567655 5677999999999999999999999876544432 1222222112233 489996 457
Q ss_pred ceeeEEEeeCCCCCccchHHHHHHHHh---hhhcCCcchHHHHHHHH
Q 020968 262 WRLGWLVTSDPNGILQDSGIVDSIKSF---LNISSDPATFIQFLKSS 305 (319)
Q Consensus 262 ~r~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~ 305 (319)
+.+|.+++.+ ++.+.+... ...+.+.++++..+...
T Consensus 300 ~Pigavv~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a 338 (442)
T TIGR03372 300 MPIGATIATE--------AVFSVLFDNPFLHTTTFGGNPLACAAALA 338 (442)
T ss_pred ccceEEEecH--------HHHHhhhccCccccCCCCCCHHHHHHHHH
Confidence 6899998753 455555321 12233345555555444
No 318
>PRK07482 hypothetical protein; Provisional
Probab=99.15 E-value=5.7e-09 Score=98.47 Aligned_cols=255 Identities=16% Similarity=0.121 Sum_probs=147.5
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
.+..+|||..|--..... .-.|.+.++++++++...+ ..+. ....+.+..+|+.+.+... -+.+.+++++++++
T Consensus 48 dG~~ylD~~sg~~~~~lG-h~~p~v~~Av~~q~~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGSE 122 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVG-YGRTEVAEAIAEQAKELAYYHTYV--GHGTEASITLSKRIIDRAP--AGMSKVYYGLSGSD 122 (461)
T ss_pred CCCEEEEcccchhhhcCC-CCCHHHHHHHHHHHHhcCcccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHH
Confidence 467788988884322122 3468899999999876431 1111 1223555556666655322 13468999999999
Q ss_pred HHHHHHHHhc------C-C-CCEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCCCC---c-------
Q 020968 122 AIEVILTVLA------R-P-GANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAKGW---E------- 170 (319)
Q Consensus 122 ai~~~~~~l~------~-~-gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~---~------- 170 (319)
|+..+++... . + ..+|+....+|++....+... |. .+..++....... .
T Consensus 123 Ave~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 202 (461)
T PRK07482 123 ANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFS 202 (461)
T ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHH
Confidence 9999988653 1 2 357888888887743322211 10 1111111100000 0
Q ss_pred -CCHHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968 171 -VDLDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (319)
Q Consensus 171 -~d~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 244 (319)
.+++.+++.+. ++..+|++.-.....|.+ .+..-++++.++|+++|+++|.||++.+|...|..+. ...++-.
T Consensus 203 ~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a-~~~~gv~ 281 (461)
T PRK07482 203 AYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFG-SDHYGIE 281 (461)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhh-HHhcCCC
Confidence 03566777663 234555555445555765 5677899999999999999999999998865553322 2223322
Q ss_pred CCeEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHh--------hhhcCCcchHHHHHHHHHH--hccccc
Q 020968 245 VPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQFLKSSRK--LKRNSF 313 (319)
Q Consensus 245 ~~vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l--~~~~~~ 313 (319)
+.++ .++|.+ ..|. .+|.+++.+ ++.+.+... ...+.+.++++..+....+ ++++++
T Consensus 282 PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l 349 (461)
T PRK07482 282 PDLI---TVAKGL-TSAYAPLSGSIVGE--------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENL 349 (461)
T ss_pred CCEE---EEcccc-ccCccccceeeecH--------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCH
Confidence 3344 369995 4564 899888753 455555421 1223455667766655543 344444
Q ss_pred cc
Q 020968 314 LK 315 (319)
Q Consensus 314 ~~ 315 (319)
.+
T Consensus 350 ~~ 351 (461)
T PRK07482 350 VG 351 (461)
T ss_pred HH
Confidence 33
No 319
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.15 E-value=9.6e-09 Score=96.92 Aligned_cols=220 Identities=15% Similarity=0.115 Sum_probs=130.5
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+..+||+..|--.... --..|.+.+++.++++.... +.. ..+.+..+++.+.+... ..+.+++++++++|.
T Consensus 98 G~~yiD~~~g~g~~~l-Gh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA~ 168 (474)
T PLN02482 98 GNEYIDYVGSWGPAII-GHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTEAC 168 (474)
T ss_pred CCEEEEeccccccccc-CCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHHHH
Confidence 4445666555321111 13358899999999876542 321 12455566777665432 247999999999999
Q ss_pred HHHHHHhcC--CCCEEEEcCCCCcchHHHH-hh--CCCeEEEEecc---C---CCC-C---cCCHHHHHhhhcc---Cce
Q 020968 124 EVILTVLAR--PGANILLPRPGFPYYEARA-TH--SHLEVRHFDLL---P---AKG-W---EVDLDAVEALADE---NTV 185 (319)
Q Consensus 124 ~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~-~~--~g~~~~~~~~~---~---~~~-~---~~d~~~l~~~l~~---~~~ 185 (319)
..+++.... ...+|+....+|+++.... .. .+......+.. + ..+ . .-|++.+++.+.. +..
T Consensus 169 e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iA 248 (474)
T PLN02482 169 MGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIA 248 (474)
T ss_pred HHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceE
Confidence 999886532 2368888888888754221 11 01000000000 0 000 0 0177888887753 344
Q ss_pred EEEEcCCCCccccccC-HHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCccee
Q 020968 186 ALVIINPGNPCGNVYT-YQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRL 264 (319)
Q Consensus 186 ~v~l~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~ 264 (319)
+|++.......|.+.+ .+-++++.++|+++|+++|+||++.++ ..+.. .....+.-...+ .+++|.++ .|+.+
T Consensus 249 avI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~-ga~~~~gv~PDi---~t~gK~lg-gG~Pi 322 (474)
T PLN02482 249 AVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYG-GAQEYFGITPDL---TTLGKVIG-GGLPV 322 (474)
T ss_pred EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcc-hHhHHhCCCCCE---EEecchhh-CCCce
Confidence 5555544555676554 677999999999999999999999877 33322 111112222222 37799964 78999
Q ss_pred eEEEeeCCCCCccchHHHHHHH
Q 020968 265 GWLVTSDPNGILQDSGIVDSIK 286 (319)
Q Consensus 265 G~i~~~~~~~~~~~~~~~~~~~ 286 (319)
|.+++.. ++++.+.
T Consensus 323 gav~g~~--------ei~~~~~ 336 (474)
T PLN02482 323 GAYGGRR--------EIMEMVA 336 (474)
T ss_pred EEEEEcH--------HHHHhhc
Confidence 9997743 4666554
No 320
>PRK05965 hypothetical protein; Provisional
Probab=99.14 E-value=4.6e-09 Score=99.09 Aligned_cols=256 Identities=17% Similarity=0.154 Sum_probs=146.4
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|--..... .-.|.+.+++.+++....+. ........+.+..+++.+.+... -+.+.+++++++++|
T Consensus 44 dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~-~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGSEA 119 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVG-YGQESIVEAAAEQMRELPYA-TGYFHFGSEPAIRLAAKLAERAP--GSLNHVYFTLGGSDA 119 (459)
T ss_pred CCCEEEECcccHHhccCC-CCCHHHHHHHHHHHHhcCCc-ccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCChhHH
Confidence 467788887763221111 23688999999988753210 00001112334445555544321 134689999999999
Q ss_pred HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHH-hhCCC------------eEEEEeccCC--CCCcCC-------
Q 020968 123 IEVILTVLAR-------P-GANILLPRPGFPYYEARA-THSHL------------EVRHFDLLPA--KGWEVD------- 172 (319)
Q Consensus 123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~--~~~~~d------- 172 (319)
+..+++.... + ..+|+....+|++....+ ...+. .+..++.... ..+.-|
T Consensus 120 ve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (459)
T PRK05965 120 VDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAA 199 (459)
T ss_pred HHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHH
Confidence 9999886431 2 357888888887753222 11111 0112221100 001113
Q ss_pred -HHHHHhhhc----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968 173 -LDAVEALAD----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (319)
Q Consensus 173 -~~~l~~~l~----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~ 246 (319)
++.+++.+. ++..+|++.-.....|. +.+..-++++.++|++||+++|.||++.+|...|..+ ....+.-.+.
T Consensus 200 ~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv~PD 278 (459)
T PRK05965 200 SVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF-ACEAEGVVPD 278 (459)
T ss_pred HHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh-hHhhcCCCCC
Confidence 246666664 24455665554555676 5577779999999999999999999999986555322 2222322233
Q ss_pred eEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH--------hhhhcCCcchHHHHHHHHHH--hccccccc
Q 020968 247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS--------FLNISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 247 vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
++ .++|.+ ..| +.+|.+++.+ ++.+.+.. ....+.+.++++..+..+.+ ++++++.+
T Consensus 279 iv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~ 346 (459)
T PRK05965 279 LM---TVAKGL-TSGYVPMGAVLMSD--------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLA 346 (459)
T ss_pred eE---Eechhh-ccCCcceeEEEEcH--------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 44 469995 557 5999999853 46655542 12223455666665544443 44555443
No 321
>PRK07678 aminotransferase; Validated
Probab=99.14 E-value=8.2e-09 Score=97.21 Aligned_cols=254 Identities=12% Similarity=0.081 Sum_probs=142.1
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|--..... .-.|.+.+++.+++..... +... ...+....+++.+.+..+ ..+.+++++++++|
T Consensus 45 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~--~~~~-~~~~~~~~lae~l~~~~~---~~~~v~f~~sGseA 117 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVG-YGRKELAEAAYEQLKTLSY--FPLT-QSHEPAIKLAEKLNEWLG---GEYVIFFSNSGSEA 117 (451)
T ss_pred CCCEEEEccccHHhhcCC-CCCHHHHHHHHHHHHhcCc--cccc-cCCHHHHHHHHHHHHhCC---CCCEEEEeCCcHHH
Confidence 467788887763221111 3358888999988875432 1111 112334445665554332 23589999999999
Q ss_pred HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCCC--CcC-----C--
Q 020968 123 IEVILTVLAR-------PG-ANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAKG--WEV-----D-- 172 (319)
Q Consensus 123 i~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~~-----d-- 172 (319)
+..+++.... +| .+|+....+|++....+.. .+. .+..++...... +.. +
T Consensus 118 ~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (451)
T PRK07678 118 NETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLE 197 (451)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHH
Confidence 9998876431 23 5788888888775433321 111 112222110000 000 1
Q ss_pred -HHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968 173 -LDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (319)
Q Consensus 173 -~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~ 246 (319)
.+.+++.+. ++..+|++.-.....|.+ .+.+-++++.++|+++|+++|.||++.+|...|..+ ....++-.+.
T Consensus 198 ~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~gv~PD 276 (451)
T PRK07678 198 CVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF-GFMNYGVKPD 276 (451)
T ss_pred HHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhH-HHHhcCCCCC
Confidence 123455553 344556555444445655 566779999999999999999999998875554321 1222322222
Q ss_pred eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh-------hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968 247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
++ +++|.++...+.+|.+++.+ ++.+.+... ...+.+.++++..+....+ ++++++.+
T Consensus 277 iv---t~gK~lggG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~ 343 (451)
T PRK07678 277 II---TMAKGITSAYLPLSATAVKK--------EIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIE 343 (451)
T ss_pred EE---EeecccccCCcceeEEEEcH--------HHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence 33 57999654447999999854 466666421 2223344555555544433 34444443
No 322
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.14 E-value=1.8e-09 Score=98.65 Aligned_cols=200 Identities=20% Similarity=0.154 Sum_probs=135.1
Q ss_pred eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHH
Q 020968 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI 126 (319)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~ 126 (319)
.|||=+...+ --+.+..+++|.. .+. .|+.++...+|++.+++++ ..+.++.|..++.+-..+
T Consensus 43 ~IDLrSDTgT----~apS~~m~aAM~~---GDD--~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRgaE~Il 105 (467)
T TIGR02617 43 FIDLLTDSGT----GAVTQSMQAAMMR---GDE--AYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAEQIY 105 (467)
T ss_pred EEECccCCCC----CCCCHHHHHHHHc---CCc--ccccCchHHHHHHHHHHHh--------CCceEEECCCCchHHHHH
Confidence 4666555533 1366788888875 332 5888888999999999998 456788898889999999
Q ss_pred HHHhcC-CCCEEEEcCC--------CCcchHHHHhhCCCeEEEEecc--------CCCCCcCCHHHHHhhhcc----Cce
Q 020968 127 LTVLAR-PGANILLPRP--------GFPYYEARATHSHLEVRHFDLL--------PAKGWEVDLDAVEALADE----NTV 185 (319)
Q Consensus 127 ~~~l~~-~gd~Vl~~~p--------~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~l~~----~~~ 185 (319)
++.+++ +|+.+.+..+ .|......+...|..+..+... ...+..+|++++++++++ +..
T Consensus 106 ~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~ 185 (467)
T TIGR02617 106 IPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVP 185 (467)
T ss_pred HHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCce
Confidence 999988 6777665443 2233345677888887765432 122357899999999874 222
Q ss_pred EEEEcCCCC-ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCc-c---------CCCCCCCCCccc-----CCCCCeEE
Q 020968 186 ALVIINPGN-PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL-A---------FGNTPFVPMGVF-----GSIVPVLT 249 (319)
Q Consensus 186 ~v~l~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~-~---------~~~~~~~~~~~~-----~~~~~vi~ 249 (319)
.+...-.+| -.|.++|.+.++++.++|+++|+.++.|.+-..- . +.+. ++..+ ... ..+
T Consensus 186 ~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~---si~eI~rE~~~~a--Dsv 260 (467)
T TIGR02617 186 YIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNW---SIEQITRETYKYA--DML 260 (467)
T ss_pred eeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCC---CHHHHHHHhhccC--CEE
Confidence 332222234 4589999999999999999999999999865331 1 2222 22211 111 267
Q ss_pred EecCccccCCC-cceeeEEEeeC
Q 020968 250 LGSISKRWIVP-GWRLGWLVTSD 271 (319)
Q Consensus 250 ~~s~sK~~~~~-G~r~G~i~~~~ 271 (319)
..|+||.+++| | |++++++
T Consensus 261 t~slsKglgApvG---g~Lag~d 280 (467)
T TIGR02617 261 AMSAKKDAMVPMG---GLLCFKD 280 (467)
T ss_pred EEEcCCCCCCccc---ceEEecc
Confidence 77999998777 4 5555544
No 323
>PRK12403 putative aminotransferase; Provisional
Probab=99.14 E-value=7.9e-09 Score=97.51 Aligned_cols=255 Identities=17% Similarity=0.154 Sum_probs=137.5
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC-cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST-VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
.+..++||..|--.....+ -.|.+.++++++++.... +... .+..+....+++.+....+ -..+.+++++++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~--~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse 126 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPY--YNMFFHTTHPAVIELSELLFSLLP--GHYSHAIYTNSGSE 126 (460)
T ss_pred CCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCC--eecccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence 3667888776632111122 458899999999876321 1111 1223344445555444222 12468999999999
Q ss_pred HHHHHHHHhc-------CCCC-EEEEcCCCCcchH-HHHhhCCCe-----------EEEEeccCC--CCCcC--------
Q 020968 122 AIEVILTVLA-------RPGA-NILLPRPGFPYYE-ARATHSHLE-----------VRHFDLLPA--KGWEV-------- 171 (319)
Q Consensus 122 ai~~~~~~l~-------~~gd-~Vl~~~p~~~~~~-~~~~~~g~~-----------~~~~~~~~~--~~~~~-------- 171 (319)
|+..+++... ++++ .|+....+|++.. ......|.. +..++.... ..+..
T Consensus 127 A~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 206 (460)
T PRK12403 127 ANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRR 206 (460)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHH
Confidence 9999998764 1223 4555556776542 222222211 112221000 00011
Q ss_pred CHHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968 172 DLDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (319)
Q Consensus 172 d~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~ 246 (319)
+.+.+++.+. ++..+|++.......|.+ .+.+-++++.++|++||+++|.||++..|...|.... ...++-.+.
T Consensus 207 ~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a-~e~~gv~PD 285 (460)
T PRK12403 207 AALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFA-HEHFGFEPD 285 (460)
T ss_pred HHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhh-hhhcCCCCC
Confidence 1244555442 234455555445555764 4667799999999999999999999988765554321 112222222
Q ss_pred eEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHh-----hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968 247 VLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 247 vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
|+ +++|.+ ..|. .+|.+++.+ ++.+.+... ...+.+.++++..++...+ ++++++.+
T Consensus 286 -iv--~~gK~l-ggG~~Piga~v~~~--------~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~ 350 (460)
T PRK12403 286 -TL--SIAKGL-TSGYVPMGGLVLSK--------RIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVT 350 (460)
T ss_pred -eE--EEcccc-cccccceEEEEECH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 33 389995 4574 899888743 455555321 1223334555555544433 34444443
No 324
>PRK06105 aminotransferase; Provisional
Probab=99.13 E-value=8.1e-09 Score=97.45 Aligned_cols=257 Identities=16% Similarity=0.141 Sum_probs=144.8
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
.+..++||..|.-..... --+|.+.+++.++++...+ .... ....+.+..+++.+.+..+ -+.+.+++++++++
T Consensus 46 dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse 120 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALG-FSEQRLVEAAARQMKKLPFYHTFS--HKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGSE 120 (460)
T ss_pred CCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHHhCCCeeccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 467789988774221111 3368899999999876321 1111 1123444445555554332 13468999999999
Q ss_pred HHHHHHHHhc------C-C-CCEEEEcCCCCcchHHHHhh-CCCe------------EEEEeccCCCCCc----------
Q 020968 122 AIEVILTVLA------R-P-GANILLPRPGFPYYEARATH-SHLE------------VRHFDLLPAKGWE---------- 170 (319)
Q Consensus 122 ai~~~~~~l~------~-~-gd~Vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~~~~---------- 170 (319)
|+..+++... . + ..+|+...-.|++....+.. .+.. +..++......+.
T Consensus 121 Ave~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 200 (460)
T PRK06105 121 ANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFA 200 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHH
Confidence 9999998742 1 2 35788888888764322211 1111 1111111000000
Q ss_pred -CCHHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968 171 -VDLDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (319)
Q Consensus 171 -~d~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 244 (319)
...+++++.+. ++..+|++.......|.+ .+++-++++.++|+++|+++|+||++.++...|..+ ....++-.
T Consensus 201 ~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f-~~~~~~v~ 279 (460)
T PRK06105 201 TRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMF-GCETFGIK 279 (460)
T ss_pred HHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhh-hHHhcCCC
Confidence 01345666652 234555555445555764 577779999999999999999999998775444322 12222222
Q ss_pred CCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh--------hhhcCCcchHHHHHHHHHH--hcccccc
Q 020968 245 VPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQFLKSSRK--LKRNSFL 314 (319)
Q Consensus 245 ~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l--~~~~~~~ 314 (319)
+.++ +++|.++...+.+|.+++.+ ++.+.+... ...+...++++..++...+ ++++++.
T Consensus 280 PDi~---~~gK~lggG~~P~~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~ 348 (460)
T PRK06105 280 PDIL---VMSKQLSSSYQPLSAVLMNE--------KVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLV 348 (460)
T ss_pred CCee---eeecccccCcccceEEEEcH--------HHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 2233 67999654336899999853 466655431 1223345666665544433 4444554
Q ss_pred cc
Q 020968 315 KS 316 (319)
Q Consensus 315 ~~ 316 (319)
++
T Consensus 349 ~~ 350 (460)
T PRK06105 349 GN 350 (460)
T ss_pred HH
Confidence 43
No 325
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.13 E-value=5.5e-09 Score=98.37 Aligned_cols=216 Identities=16% Similarity=0.125 Sum_probs=125.9
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+..++|+..|--...- =--.|.+.+++.+++..... +. .....+.+..+++.+..... -..+.+++++++++|+
T Consensus 81 G~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~ql~~l~~--~~-~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEAv 154 (459)
T PRK11522 81 GQEFIDCLGGFGIFNV-GHRNPVVVSAVQNQLAKQPL--HS-QELLDPLRAMLAKTLAALTP--GKLKYSFFCNSGTESV 154 (459)
T ss_pred CCEEEECCcCHHhhhc-CCCCHHHHHHHHHHHhhCcc--cc-cccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCchHHH
Confidence 4556777666211101 13458899999998875322 11 11223455556666554322 1236899999999999
Q ss_pred HHHHHHhcC----CC-CEEEEcCCCCcchHHHHh-hCCCeEEE---EeccCCCC--CcCCHHHHHhhhc------cCceE
Q 020968 124 EVILTVLAR----PG-ANILLPRPGFPYYEARAT-HSHLEVRH---FDLLPAKG--WEVDLDAVEALAD------ENTVA 186 (319)
Q Consensus 124 ~~~~~~l~~----~g-d~Vl~~~p~~~~~~~~~~-~~g~~~~~---~~~~~~~~--~~~d~~~l~~~l~------~~~~~ 186 (319)
..+++.... +| .+|+.....|++....+. ..+..... .+..+.-. --.|.+.+++.+. ++..+
T Consensus 155 e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAa 234 (459)
T PRK11522 155 EAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAA 234 (459)
T ss_pred HHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEE
Confidence 999885431 23 468888888877543332 22211110 11100000 0126777777764 23445
Q ss_pred EEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc-cee
Q 020968 187 LVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRL 264 (319)
Q Consensus 187 v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G-~r~ 264 (319)
+++.......|.+ .+..-++++.++|+++|+++|.||++.++...|..+ ....++-.+.++ +++|.+ ..| +.+
T Consensus 235 vIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---t~gK~l-ggG~~Pi 309 (459)
T PRK11522 235 VILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF-ACEHENVQPDIL---CLAKAL-GGGVMPI 309 (459)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh-hhhccCCCCCEE---Eechhh-hCCCccc
Confidence 5555555566765 466679999999999999999999998764444321 112222222233 789996 456 689
Q ss_pred eEEEee
Q 020968 265 GWLVTS 270 (319)
Q Consensus 265 G~i~~~ 270 (319)
|.+++.
T Consensus 310 gav~~~ 315 (459)
T PRK11522 310 GATIAT 315 (459)
T ss_pred eeEEEc
Confidence 999885
No 326
>PRK07046 aminotransferase; Validated
Probab=99.11 E-value=2e-08 Score=94.47 Aligned_cols=216 Identities=13% Similarity=0.044 Sum_probs=126.4
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+..+|||..|.-...- ---.|.+.+++.+++.......+. .+....+++.+.+.. ..+.+.+++++++|.
T Consensus 74 G~~yiD~~~g~g~~~l-Gh~~p~i~~Av~~q~~~~~~~~~~-----~~~~~~lAe~l~~~~----~~~~v~F~nSGtEA~ 143 (453)
T PRK07046 74 GHRYDDFCLGDTGAMF-GHSPAPVARALAEQARRGLTTMLP-----SEDAAWVGEELARRF----GLPYWQVATTATDAN 143 (453)
T ss_pred CCEEEEeccccccccc-CCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHHh----CCCEEEEECCHHHHH
Confidence 4556776655311101 134589999999998875432222 244455666555432 357899999999999
Q ss_pred HHHHHHhcC--CCCEEEEcCCCCcchHHHHh-h--CCCe-----EEEEeccCCCCC----cCCHHHHHhhhcc-CceEEE
Q 020968 124 EVILTVLAR--PGANILLPRPGFPYYEARAT-H--SHLE-----VRHFDLLPAKGW----EVDLDAVEALADE-NTVALV 188 (319)
Q Consensus 124 ~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~-~--~g~~-----~~~~~~~~~~~~----~~d~~~l~~~l~~-~~~~v~ 188 (319)
..+++.... ..++|+...-+|+++..... . .+.. ...++....... --|++.+++.+.. +..+|+
T Consensus 144 e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi 223 (453)
T PRK07046 144 RFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALADGDVAAVL 223 (453)
T ss_pred HHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhCCCCeEEEE
Confidence 999886532 34788888888887632211 1 1100 000000000000 0278889888853 344555
Q ss_pred EcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc--CCCCCCCCCcccCCCCCeEEEecCccccCCCcceee
Q 020968 189 IINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLA--FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG 265 (319)
Q Consensus 189 l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~--~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G 265 (319)
+.-.....|. ..+.+-++++.++|+++|+++|.||+.. |. +++. ...++-.+. ++ +++|.+ ..|+.+|
T Consensus 224 ~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~----~~~~gv~PD-i~--t~gK~l-ggG~Pi~ 294 (453)
T PRK07046 224 AEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGY----TRAHGLEPD-FL--VVGKPI-AGGVPCA 294 (453)
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcch----hHHhCCCcc-ce--eehhhh-cCCCcce
Confidence 4433434454 4455679999999999999999999986 32 2221 111221122 33 489996 5689999
Q ss_pred EEEeeCCCCCccchHHHHHHH
Q 020968 266 WLVTSDPNGILQDSGIVDSIK 286 (319)
Q Consensus 266 ~i~~~~~~~~~~~~~~~~~~~ 286 (319)
.+++.. ++.+.+.
T Consensus 295 av~g~~--------~i~~~~~ 307 (453)
T PRK07046 295 VYGFSA--------ELAERAQ 307 (453)
T ss_pred eeeehH--------HHHHHHh
Confidence 988753 4666664
No 327
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.09 E-value=8.2e-09 Score=96.57 Aligned_cols=255 Identities=17% Similarity=0.164 Sum_probs=140.3
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|.-..... .-.|.+.+++.+++.+.......... .+....+++.+.+..+ -..+.+++++++++|
T Consensus 43 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~--~~~~~~la~~l~~~~~--~~~~~v~f~~sGseA 117 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHG-YNHPRLNAAAQKQIDKMSHVMFGGFT--HKPAIELCQKLVKMTP--NALDCVFLADSGSVA 117 (427)
T ss_pred CCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCccccccC--CHHHHHHHHHHHhhCC--CCCCEEEEeCCcHHH
Confidence 467789988774221112 34578889999888753211110001 1222334444433222 134689999999999
Q ss_pred HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHhh-CCCe-------------EEEEeccCCCCCc-----CCHHH
Q 020968 123 IEVILTVLAR-------P-GANILLPRPGFPYYEARATH-SHLE-------------VRHFDLLPAKGWE-----VDLDA 175 (319)
Q Consensus 123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~~~~-----~d~~~ 175 (319)
+..+++.... + ..+|+....+|++....+.. .+.. ...++. +...+. -|.++
T Consensus 118 ~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~ 196 (427)
T TIGR00508 118 VEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAITP 196 (427)
T ss_pred HHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHHHH
Confidence 9988875431 2 26788888888775332222 1211 011111 111111 14566
Q ss_pred HHhhhc---cCceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968 176 VEALAD---ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (319)
Q Consensus 176 l~~~l~---~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~ 250 (319)
+++.+. ++..+|++... ..-.|. .++.+.++++.++|+++|+++|+||++.++...|..+.. ..++-... |+
T Consensus 197 l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~-~~~~v~pD-i~- 273 (427)
T TIGR00508 197 LAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFAC-EHAGVVPD-IL- 273 (427)
T ss_pred HHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchh-hhcCCCCC-EE-
Confidence 666664 23445554442 444454 557899999999999999999999999776555533221 11221222 33
Q ss_pred ecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHh------hhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968 251 GSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQFLKSSRK--LKRNSFLKS 316 (319)
Q Consensus 251 ~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l--~~~~~~~~~ 316 (319)
+++|.+ ..|+ .++.+++.+ ++.+.++.. ...+...++++..++..++ +.++++.++
T Consensus 274 -~~gK~l-~gG~~p~~a~~~~~--------~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~ 338 (427)
T TIGR00508 274 -CVGKAL-TGGYMTLSATVTTD--------KVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQ 338 (427)
T ss_pred -Eechhh-hcCcccceEEEEcH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence 379997 5674 677777642 466666531 1112233555555544433 345555544
No 328
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.09 E-value=7.9e-09 Score=96.59 Aligned_cols=222 Identities=14% Similarity=0.061 Sum_probs=128.6
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..+||+..|--...- ---.|.+.+++.+++.......+. .+.+..+++.+.+..+ ...+.+++++++++|
T Consensus 51 dG~~yiD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~L~~~~~--~~~~~v~f~~SGsEA 122 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIH-GHSHPKICDAIQQGAERGTSYGLT-----SEQEILFAEELFSYLG--LEDHKIRFVSSGTEA 122 (433)
T ss_pred CCCEEEEcccchhcccc-CCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCchHHH
Confidence 46678888776422111 134688999999988764321111 2334445555544322 223689999999999
Q ss_pred HHHHHHHhcC-CC-CEEEEcCCCCcchHHH---HhhC-CCeE----EEEeccC-CCC---C-cCCHHHHHhhhcc---Cc
Q 020968 123 IEVILTVLAR-PG-ANILLPRPGFPYYEAR---ATHS-HLEV----RHFDLLP-AKG---W-EVDLDAVEALADE---NT 184 (319)
Q Consensus 123 i~~~~~~l~~-~g-d~Vl~~~p~~~~~~~~---~~~~-g~~~----~~~~~~~-~~~---~-~~d~~~l~~~l~~---~~ 184 (319)
+..+++.... .| .+|+....+|+++... .... +... ......+ ... + .-|++.+++.+.. +.
T Consensus 123 ~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 202 (433)
T PRK00615 123 TMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRV 202 (433)
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCce
Confidence 9999886532 23 6788888888774311 1111 1000 0000000 000 0 1267888887742 34
Q ss_pred eEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968 185 VALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (319)
Q Consensus 185 ~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r 263 (319)
.+|++.......|.+. +.+-++++.++|++||+++|+||++.++ ..|.. .....+.-.+. |+ +++|.++ .|+.
T Consensus 203 aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~-ga~~~~gv~PD-i~--~~gK~lg-gG~p 276 (433)
T PRK00615 203 AGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQG-GAAAIYHVKPD-IT--VYGKILG-GGLP 276 (433)
T ss_pred EEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHh-HHHHhcCCCCC-eE--EEccccc-CCcc
Confidence 4555554455557654 5667999999999999999999999776 33321 11111221122 33 4899964 5688
Q ss_pred eeEEEeeCCCCCccchHHHHHHH
Q 020968 264 LGWLVTSDPNGILQDSGIVDSIK 286 (319)
Q Consensus 264 ~G~i~~~~~~~~~~~~~~~~~~~ 286 (319)
+|++++++ ++++.+.
T Consensus 277 ~~av~~~~--------~i~~~~~ 291 (433)
T PRK00615 277 AAAVVAHK--------SIMDHLA 291 (433)
T ss_pred eeeeeecH--------HHHhhhc
Confidence 99999854 4666654
No 329
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.09 E-value=2.4e-08 Score=90.64 Aligned_cols=207 Identities=17% Similarity=0.154 Sum_probs=136.5
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..+||+..+.-...-. -.+|.+.+|+++++..+. .|+.+ .+++-.+|+.+.+..+ ..+.|-+++++|+|
T Consensus 51 DGn~YIDy~~~~Gp~ilG-H~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTEA 121 (432)
T COG0001 51 DGNEYIDYVLGWGPLILG-HAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTEA 121 (432)
T ss_pred CCCEeeehhccCcccccC-CCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhHH
Confidence 467789988886432222 345779999999998864 46543 2555557777766433 34899999999999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCCcchHHH-HhhCCCeE-------------------EEEeccCCCCCcCCHHHHHhhh
Q 020968 123 IEVILTVLA--RPGANILLPRPGFPYYEAR-ATHSHLEV-------------------RHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 123 i~~~~~~l~--~~gd~Vl~~~p~~~~~~~~-~~~~g~~~-------------------~~~~~~~~~~~~~d~~~l~~~l 180 (319)
...+++.-. ...|+|+..+-+|+.+... +...|-.. +.++. -|++.+++++
T Consensus 122 tmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-------ND~~al~~~~ 194 (432)
T COG0001 122 TMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------NDLEALEEAF 194 (432)
T ss_pred HHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-------CCHHHHHHHH
Confidence 998887653 2348999999999876543 33333211 11221 1889999988
Q ss_pred ccC--ceEEEEcCC-CCccccccCHH-HHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc
Q 020968 181 DEN--TVALVIINP-GNPCGNVYTYQ-HLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR 256 (319)
Q Consensus 181 ~~~--~~~v~l~~p-~nptG~~~~~~-~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~ 256 (319)
+.. ..+.+|.-| ---.|.+.+.+ -++++.++|+++|+++|.||+.-.|...-..-.....+.++ +.++.|.
T Consensus 195 ~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi 269 (432)
T COG0001 195 EEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI 269 (432)
T ss_pred HHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh
Confidence 653 233444544 33346655544 48999999999999999999998775431111112222222 3478999
Q ss_pred cCCCcceeeEEEeeC
Q 020968 257 WIVPGWRLGWLVTSD 271 (319)
Q Consensus 257 ~~~~G~r~G~i~~~~ 271 (319)
...|+.+|.+.++.
T Consensus 270 -IGGGlP~ga~gGr~ 283 (432)
T COG0001 270 -IGGGLPIGAFGGRA 283 (432)
T ss_pred -hcCCcceeeeccHH
Confidence 68999999998853
No 330
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.09 E-value=2e-08 Score=94.05 Aligned_cols=251 Identities=14% Similarity=0.073 Sum_probs=144.2
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|--...- =--.|.+.+++.+++.......+. .+.+..+++.+.+..+ ..+.+++++++++|
T Consensus 51 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~l~~~~p---~~~~v~f~~sGseA 121 (428)
T PRK12389 51 DGNKYIDYLAAYGPIIT-GHAHPHITKAITEAAENGVLYGTP-----TELEIEFAKMLKEAIP---SLEKVRFVNSGTEA 121 (428)
T ss_pred CCCEEEEcccccccccc-CCCCHHHHHHHHHHHHhCCccCCC-----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHHH
Confidence 36678888766422111 134588999999988764332221 2334555555544322 24689999999999
Q ss_pred HHHHHHHhcC--CCCEEEEcCCCCcchHHHHh-hCCCeEEEE------ecc--CCCCC----cCCHHHHHhhhc---cCc
Q 020968 123 IEVILTVLAR--PGANILLPRPGFPYYEARAT-HSHLEVRHF------DLL--PAKGW----EVDLDAVEALAD---ENT 184 (319)
Q Consensus 123 i~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~-~~g~~~~~~------~~~--~~~~~----~~d~~~l~~~l~---~~~ 184 (319)
+..+++.... ...+|+...-+|++....+. ..+...... ... ...+. ..|++.+++.+. ++.
T Consensus 122 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 201 (428)
T PRK12389 122 VMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEV 201 (428)
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcE
Confidence 9999886532 23678888888877543222 222111000 000 00000 126888888774 244
Q ss_pred eEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968 185 VALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (319)
Q Consensus 185 ~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r 263 (319)
.+|++.......|.+. +..-++++.++|+++|+++|.||++.++ ..+... ....++-.+.+ -+++|.+ ..|+.
T Consensus 202 aavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~-a~~~~gv~PDi---vt~gK~l-ggG~P 275 (428)
T PRK12389 202 AAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGG-AQDLLGVEPDL---TALGKII-GGGLP 275 (428)
T ss_pred EEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcch-hhHHhCCCCCe---eeechhh-cCCCc
Confidence 5555554456667654 5677999999999999999999999987 322110 11111211223 3789996 56799
Q ss_pred eeEEEeeCCCCCccchHHHHHHHH----hhhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968 264 LGWLVTSDPNGILQDSGIVDSIKS----FLNISSDPATFIQFLKSSRK--LKRNSFLKS 316 (319)
Q Consensus 264 ~G~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l--~~~~~~~~~ 316 (319)
+|.+++.. ++.+.+.. ....+...++++..+....+ ++++++.++
T Consensus 276 i~av~~~~--------~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~ 326 (428)
T PRK12389 276 IGAYGGRK--------DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEK 326 (428)
T ss_pred eeEEeEHH--------HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHH
Confidence 99998743 46665532 11223345666655444433 344444443
No 331
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.08 E-value=1.7e-08 Score=95.11 Aligned_cols=217 Identities=13% Similarity=0.079 Sum_probs=125.2
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+..++||..+..... . --.|.+.+++.+++....+ .......+.+..+++.+.+..+ -..+.+++++++++|+
T Consensus 71 G~~ylD~~g~~~~~l-G-h~~p~v~~Ai~~ql~~~~~---~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseAv 143 (459)
T PRK06082 71 GKKYMDFHGNNVHQL-G-YGHPHVIEKVKEQMAKLPF---SPRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTSAI 143 (459)
T ss_pred CCEEEEcccHhhccc-C-CCCHHHHHHHHHHHHhCCC---ccCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHHHH
Confidence 556778763322111 1 2668899999998875322 1111123445556666655332 1236899999999999
Q ss_pred HHHHHHhc--CCCCEEEEcCCCCcchHH-HHhhCCCe------------EEEEeccCCCC--Cc-C------CHHHHHhh
Q 020968 124 EVILTVLA--RPGANILLPRPGFPYYEA-RATHSHLE------------VRHFDLLPAKG--WE-V------DLDAVEAL 179 (319)
Q Consensus 124 ~~~~~~l~--~~gd~Vl~~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~--~~-~------d~~~l~~~ 179 (319)
..+++... ....+|+.....|++... .....|.. +..++...... +. . +++.+++.
T Consensus 144 e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (459)
T PRK06082 144 GMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYV 223 (459)
T ss_pred HHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHH
Confidence 99987653 123678888888876432 22222211 11122110000 10 0 12456666
Q ss_pred hc--cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc
Q 020968 180 AD--ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW 257 (319)
Q Consensus 180 l~--~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~ 257 (319)
+. .+..+|++....+..+.+.+.+-++++.++|+++|+++|.||++.++...|..+. ...++-.+.++ .++|.+
T Consensus 224 i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa-~e~~gv~PDiv---~~gKgl 299 (459)
T PRK06082 224 IEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFT-HQAYGIEPDIL---CIGKGL 299 (459)
T ss_pred HhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhH-hHhhCCCCCEE---Eecccc
Confidence 64 2444555554454445567778899999999999999999999998755553211 11222222233 389997
Q ss_pred CCCcceeeEEEeeC
Q 020968 258 IVPGWRLGWLVTSD 271 (319)
Q Consensus 258 ~~~G~r~G~i~~~~ 271 (319)
+...+.+|.+++.+
T Consensus 300 ~gG~~P~~av~~~~ 313 (459)
T PRK06082 300 GGGLVPIAAMITKD 313 (459)
T ss_pred cCCCCcceEEEEcH
Confidence 54336899998853
No 332
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.08 E-value=7.6e-09 Score=88.87 Aligned_cols=185 Identities=16% Similarity=0.121 Sum_probs=127.6
Q ss_pred CCcHHHHHHHHHHhhcCCCCCCCCC---cCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 020968 62 RTASVAVDAIVHSVRSARFNCYSST---VGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL 138 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~Y~~~---~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl 138 (319)
..++.+.+|+.+.. . .|-.+ ....++++-+...++. .+....++...++.|+..++..++.|||.|+
T Consensus 27 nl~~~V~~A~~~~~----l-gh~sPe~~qIm~~v~egikyVFkT-----~n~~tf~isgsGh~g~E~al~N~lePgd~vL 96 (385)
T KOG2862|consen 27 NLSGRVQEAMSRPS----L-GHMSPEFVQIMDEVLEGIKYVFKT-----ANAQTFVISGSGHSGWEAALVNLLEPGDNVL 96 (385)
T ss_pred CCCHHHHHhhcCCc----c-ccCCHHHHHHHHHHHHHHHHHhcc-----CCCceEEEecCCcchHHHHHHhhcCCCCeEE
Confidence 55667776664432 2 23221 1223444444444422 2344566777789999999999999999999
Q ss_pred EcCCCCc--chHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccCHHH-HHHHHHHHHH
Q 020968 139 LPRPGFP--YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYTYQH-LQKIAETAKK 214 (319)
Q Consensus 139 ~~~p~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~-l~~i~~~~~~ 214 (319)
+....-. .+...++.+|+++..++.+. +....++.+++.+.. +++++++++-...||+. ++ ++...++|++
T Consensus 97 v~~~G~wg~ra~D~~~r~ga~V~~v~~~~--G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~---q~~~~~~g~lc~k 171 (385)
T KOG2862|consen 97 VVSTGTWGQRAADCARRYGAEVDVVEADI--GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVL---QDLLAISGELCHK 171 (385)
T ss_pred EEEechHHHHHHHHHHhhCceeeEEecCc--ccCccHHHHHHHHHhcCCceEEEEecCcccccc---chHHHHHHHHhhc
Confidence 7764443 25688899999999997654 346899999998865 67899999999999998 66 6777889999
Q ss_pred cCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC-cceeeEEEee
Q 020968 215 LGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTS 270 (319)
Q Consensus 215 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~ 270 (319)
|+.++++|.+.+-. +.+ . .+++..-.+.....-|++++| |+-+ +..+
T Consensus 172 ~~~lllVD~VaSlg---gt~-F---~mDewgVDvaytgSQKaL~aP~GLsi--isfS 219 (385)
T KOG2862|consen 172 HEALLLVDTVASLG---GTE-F---EMDEWGVDVAYTGSQKALGAPAGLSI--ISFS 219 (385)
T ss_pred CCeEEEEechhhcC---Ccc-c---eehhhcccEEEecchhhcCCCCCcce--eecC
Confidence 99999999987752 211 1 223333347777778998885 6443 5554
No 333
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.06 E-value=4.6e-08 Score=91.88 Aligned_cols=220 Identities=17% Similarity=0.164 Sum_probs=125.9
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|--.... -.-.|.+.++++++++.-.. ........+.+..+++.+.+... -..+.+++++++++|
T Consensus 44 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA 118 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNA-GHGRPEIVEAVRAQAGELDY--APAFQMGHPKAFELANRIAEIAP--GGLNHVFFTNSGSES 118 (442)
T ss_pred CCCEEEECchhHHHhcc-CCCCHHHHHHHHHHHHhCCC--cccCCcCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHH
Confidence 46678888766311100 13458899999988875221 11111112344456665544321 123689999999999
Q ss_pred HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHh-hCC------------CeEEEEeccC--CC-CCcC-------
Q 020968 123 IEVILTVLAR-------P-GANILLPRPGFPYYEARAT-HSH------------LEVRHFDLLP--AK-GWEV------- 171 (319)
Q Consensus 123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~-~~g------------~~~~~~~~~~--~~-~~~~------- 171 (319)
+..+++.... + ..+|+....+|++....+. ..| ..+..++... .. .+..
T Consensus 119 ~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 198 (442)
T PRK13360 119 VDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGA 198 (442)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHH
Confidence 9999875431 1 2578888888877532211 111 1122222210 00 0111
Q ss_pred -CHHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968 172 -DLDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (319)
Q Consensus 172 -d~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~ 245 (319)
..+.+++.+. ++..+|++.......|.+ .+..-+++|.++|+++|+++|+||++.++...|.... ...+.-..
T Consensus 199 ~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~P 277 (442)
T PRK13360 199 ELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFA-AQYFGVTP 277 (442)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchh-hhhcCCCC
Confidence 1356676664 234455555445566765 5667799999999999999999999987754443321 11122112
Q ss_pred CeEEEecCccccCCCcceeeEEEeeC
Q 020968 246 PVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 246 ~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
. | -+++|.++...+.+|.+++.+
T Consensus 278 D-i--vt~gK~l~gG~~P~gav~~~~ 300 (442)
T PRK13360 278 D-L--LTCAKGLTNGAIPMGAVFVSS 300 (442)
T ss_pred c-e--eeeeeccccCccceEEEEEcH
Confidence 2 2 278999754337899988753
No 334
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.06 E-value=1.4e-08 Score=94.84 Aligned_cols=217 Identities=17% Similarity=0.116 Sum_probs=125.8
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
++..++||..|.-...- ---.|.+.+++.++++......+.. ...+.+..+++.+.+..+ -..+.+++++++++|
T Consensus 38 dG~~ylD~~~g~~~~~l-Gh~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA 112 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAH-GHGHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLTD--NGLDHVFYSDSGSVS 112 (422)
T ss_pred CCCEEEEcchhHHHhcC-CCCCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHH
Confidence 46778888766322111 1335889999999887643211111 112334445555544322 124689999999999
Q ss_pred HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCCCCCcCC-------H
Q 020968 123 IEVILTVLAR-------P-GANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAKGWEVD-------L 173 (319)
Q Consensus 123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~d-------~ 173 (319)
+..+++.... + ..+|+....+|++....+... +. ....++.... ...+ .
T Consensus 113 ~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~ 190 (422)
T PRK05630 113 VEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYL 190 (422)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHH
Confidence 9999876431 2 257888888887743222211 11 1122222110 0111 2
Q ss_pred HHHHhhhccCceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEe
Q 020968 174 DAVEALADENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLG 251 (319)
Q Consensus 174 ~~l~~~l~~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~ 251 (319)
+.+++.+.++..+|++.-. ....|. ..+.+.++++.++|+++|+++|+||++.++...|..+ ....+.-.+. |+
T Consensus 191 ~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PD-i~-- 266 (422)
T PRK05630 191 RSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELF-ATLAAGVTPD-IM-- 266 (422)
T ss_pred HHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhh-HHHhcCCCCC-ee--
Confidence 3444545556666666652 555676 4567789999999999999999999998775444321 1111221122 33
Q ss_pred cCccccCCCc-ceeeEEEeeC
Q 020968 252 SISKRWIVPG-WRLGWLVTSD 271 (319)
Q Consensus 252 s~sK~~~~~G-~r~G~i~~~~ 271 (319)
+++|.+ ..| ..+|++++++
T Consensus 267 t~gK~l-~gG~~p~~av~~~~ 286 (422)
T PRK05630 267 CVGKAL-TGGFMSFAATLCTD 286 (422)
T ss_pred eeechh-hcCccccceeeccH
Confidence 779985 446 5789998853
No 335
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.05 E-value=2.6e-08 Score=93.89 Aligned_cols=216 Identities=17% Similarity=0.164 Sum_probs=124.2
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC--CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN--CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
+..++||..|--.... ---.|.+.+++.+++...... .|.. .+.+..+++.+.+..+ ...+.+++++++++
T Consensus 52 G~~ylD~~~g~~~~~l-Gh~~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SGsE 124 (457)
T PRK05639 52 GNVFIDFLAGAAAAST-GYSHPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEISP--IENPKVLFGLSGSD 124 (457)
T ss_pred CCEEEECCcCHHhhcc-CCCCHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhCC--CCcCEEEEeCchHH
Confidence 5667888776321111 134578999999988753211 1222 2333445555544322 22368999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHh-hCCC-------------eEEEEeccCCCC--Cc----CCH------
Q 020968 122 AIEVILTVLA--RPGANILLPRPGFPYYEARAT-HSHL-------------EVRHFDLLPAKG--WE----VDL------ 173 (319)
Q Consensus 122 ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~--~~----~d~------ 173 (319)
|+..+++... ....+|+....+|++....+. ..+. .+..++...... +. .+.
T Consensus 125 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 204 (457)
T PRK05639 125 AVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINR 204 (457)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHH
Confidence 9999988653 233678888888877433222 1111 122233211000 00 022
Q ss_pred --HHHHhhh------ccCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968 174 --DAVEALA------DENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (319)
Q Consensus 174 --~~l~~~l------~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 244 (319)
+.+++.+ .++..+|++.-.....|. ..+..-++++.++|+++|+++|+||++.+|...|..+. ...++-.
T Consensus 205 ~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~ 283 (457)
T PRK05639 205 FLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFA-SEWFEVK 283 (457)
T ss_pred HHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHH-HHhcCCC
Confidence 2344433 234455655544555676 45677799999999999999999999988654443211 1112222
Q ss_pred CCeEEEecCccccCCCcceeeEEEeeC
Q 020968 245 VPVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 245 ~~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
.. |++ ++|.+ ..|+.+|.+++.+
T Consensus 284 PD-iv~--~gK~l-~gG~pi~av~~~~ 306 (457)
T PRK05639 284 PD-LII--FGKGV-ASGMGLSGVIGRK 306 (457)
T ss_pred CC-EEE--echhh-cCCCcceeEEehH
Confidence 22 333 79996 4578999999853
No 336
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=1.6e-09 Score=97.23 Aligned_cols=217 Identities=16% Similarity=0.157 Sum_probs=147.3
Q ss_pred CCcHHHHHHHHHHhhc-CC-CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 020968 62 RTASVAVDAIVHSVRS-AR-FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL 139 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~-~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~ 139 (319)
+..+.+.+++...--. +. ...-+...-+.++++.+|+|+. .++.+++..| .......+.+++.+|.-|+.
T Consensus 155 ~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIiS 226 (519)
T KOG1357|consen 155 PCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-FATNSMNIPSLLGKGSLIIS 226 (519)
T ss_pred cCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-ccccccCcceeecCCcceee
Confidence 5556666666654211 11 1122233345677888888873 3556677666 44555667888999999999
Q ss_pred cCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-------C------ceEEEEcCCCCccccccCHHHHH
Q 020968 140 PRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-------N------TVALVIINPGNPCGNVYTYQHLQ 206 (319)
Q Consensus 140 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~------~~~v~l~~p~nptG~~~~~~~l~ 206 (319)
....|.....-++..|+.+..+..+ |.++||+.+++ + ..+|++......-|.+ ..+.
T Consensus 227 DelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~i---v~Lp 296 (519)
T KOG1357|consen 227 DELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTI---VDLP 296 (519)
T ss_pred ccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCee---cccH
Confidence 9999999888999999998877753 56666666542 1 1233344555566777 5589
Q ss_pred HHHHHHHHcCCEEEEeCCCCCccCC--CCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHH
Q 020968 207 KIAETAKKLGIMVIADEVYDHLAFG--NTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDS 284 (319)
Q Consensus 207 ~i~~~~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~ 284 (319)
+++.+++++..+++.||+++.-..+ |.....+.-.++.+..|.+++|+|+|+..| ||+.+++ ++++.
T Consensus 297 ~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk--------~lid~ 365 (519)
T KOG1357|consen 297 EVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSK--------ELIDY 365 (519)
T ss_pred HHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcH--------HHHhh
Confidence 9999999999999999999975543 333333333455566799999999999999 9999864 46666
Q ss_pred HHHhhhh----cCCcchHHHHHHHHHH
Q 020968 285 IKSFLNI----SSDPATFIQFLKSSRK 307 (319)
Q Consensus 285 ~~~~~~~----~~~~~~~~q~~~~~~l 307 (319)
++..... .+.+++++|..+..+.
T Consensus 366 lrt~s~~~~yat~~sppvaqq~~ssl~ 392 (519)
T KOG1357|consen 366 LRTPSPSALYATSLSPPVAQQILTSVK 392 (519)
T ss_pred hccCCCceeecccCChHHHHHHHHHHH
Confidence 6644321 3456788888877643
No 337
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.03 E-value=1.6e-08 Score=100.36 Aligned_cols=174 Identities=18% Similarity=0.176 Sum_probs=120.7
Q ss_pred CCCCC---CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC-CHHHHHHHHHHHhcC-------C-CCEEEEcCCCCcchH
Q 020968 81 NCYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLTL-GCTQAIEVILTVLAR-------P-GANILLPRPGFPYYE 148 (319)
Q Consensus 81 ~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~-G~t~ai~~~~~~l~~-------~-gd~Vl~~~p~~~~~~ 148 (319)
+.|.| ..|+-++...+.+++.+..| .+.+-+.+ ++.+|..+++.++.. + .++|+++.-.|....
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtG----md~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp 605 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITG----FDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP 605 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHC----CCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence 46766 67776666666666666544 34445555 456566556655431 2 367889888886656
Q ss_pred HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCC
Q 020968 149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225 (319)
Q Consensus 149 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~ 225 (319)
..+...|++++.++.++ +..+|+++|++.++ ++..+|++++|++-.+.. .++++|+++++++|+++++|.++
T Consensus 606 asa~~~GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~ 680 (954)
T PRK12566 606 ASAQMAGMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGAN 680 (954)
T ss_pred HHHHHCCCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeC
Confidence 66888999999999864 34799999999987 567778888888766554 66999999999999999999998
Q ss_pred CCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceeeEEEe
Q 020968 226 DHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVT 269 (319)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i~~ 269 (319)
..-.. .......++ -.|+.++++|+|+.| |.-+|.+.+
T Consensus 681 ~~a~~---~l~~Pg~~G---ADi~~~s~HKtf~~P~G~GGP~vG~iav 722 (954)
T PRK12566 681 LNAQV---GLARPADIG---ADVSHMNLHKTFCIPHGGGGPGMGPIGV 722 (954)
T ss_pred hhhcc---CCCChhhcC---CCEEEecCCcccCcCccCCCCccchhhh
Confidence 63111 111112233 349999999998754 555666544
No 338
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.03 E-value=7.2e-08 Score=90.83 Aligned_cols=255 Identities=15% Similarity=0.075 Sum_probs=145.5
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..+||+..|--...- ---.|.+.+++.+++...... .......+.+..+++.+.+..+. ..+.+++++++++|
T Consensus 52 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~sGseA 126 (453)
T PRK06943 52 DGRRYLDAISSWWVNLF-GHANPRINAALKDQLDTLEHA--MLAGCTHEPAIELAERLAALTGG--TLGHAFFASDGASA 126 (453)
T ss_pred CCCEEEEcchHHHHhcC-CCCCHHHHHHHHHHHHhcCCc--cccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCCHHH
Confidence 36678888766311101 134588889999988753211 11111224445566666543321 23589999999999
Q ss_pred HHHHHHHhc-------CC-CCEEEEcCCCCcchHHHHh-hCCC------------eEEEEeccCCCC--Cc--------C
Q 020968 123 IEVILTVLA-------RP-GANILLPRPGFPYYEARAT-HSHL------------EVRHFDLLPAKG--WE--------V 171 (319)
Q Consensus 123 i~~~~~~l~-------~~-gd~Vl~~~p~~~~~~~~~~-~~g~------------~~~~~~~~~~~~--~~--------~ 171 (319)
+..+++... .+ ..+|+....+|++....+. ..|. .+..++.....+ +. -
T Consensus 127 ve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 206 (453)
T PRK06943 127 VEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAAR 206 (453)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHH
Confidence 999988652 12 3678888888877432221 1111 112222211000 00 1
Q ss_pred CHHHHHhhhc---cCceEEEEcC-CCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968 172 DLDAVEALAD---ENTVALVIIN-PGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (319)
Q Consensus 172 d~~~l~~~l~---~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~ 246 (319)
+++.+++.+. ++..+|++.- .....|. ..+.+-++++.++|++||+++|.||++.++...|..+ ....++-.+.
T Consensus 207 ~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f-a~~~~gv~PD 285 (453)
T PRK06943 207 ALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF-ACEQAGVWPD 285 (453)
T ss_pred HHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh-HHHhCCCCCC
Confidence 2466676664 3455666654 2555666 5677789999999999999999999999886555322 1222222233
Q ss_pred eEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH-------hhhhcCCcchHHHHHHHHHH--hccccccc
Q 020968 247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS-------FLNISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 247 vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
++ .++|..+ .| +.+|.+++.+ ++.+.+.. ....+.+.++++..+....+ ++++++.+
T Consensus 286 iv---t~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~ 352 (453)
T PRK06943 286 FL---CLSKGIS-GGYLPLSLVLSRD--------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLA 352 (453)
T ss_pred eE---eeehhhc-cCcccceEEEEcH--------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 44 3599964 67 5899999854 46555542 12223345666655554443 44444433
No 339
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.03 E-value=2.6e-08 Score=93.11 Aligned_cols=256 Identities=16% Similarity=0.166 Sum_probs=143.2
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|.-...-. --.|.+.+++.+++......... ....+.+..+++.+.+..+ -..+.+++++++++|
T Consensus 41 dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsEA 115 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMTP--QPLECVFLADSGSVA 115 (428)
T ss_pred CCCEEEEcchhHHhhcCC-CCCHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHHH
Confidence 467788887763211111 23588999999888763321111 1122445556666654332 134689999999999
Q ss_pred HHHHHHHhcC-------CCCEEEEcCCCCcchHHHHhhC-CC-------------eEEEEeccCCC---CC-cCCHHHHH
Q 020968 123 IEVILTVLAR-------PGANILLPRPGFPYYEARATHS-HL-------------EVRHFDLLPAK---GW-EVDLDAVE 177 (319)
Q Consensus 123 i~~~~~~l~~-------~gd~Vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~---~~-~~d~~~l~ 177 (319)
+..+++.... ...+|+....+|++....+... +- .+..++..... .+ .-|++.++
T Consensus 116 ve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~ 195 (428)
T PRK07986 116 VEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFA 195 (428)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHH
Confidence 9999885432 2368888888887643222211 11 11112211000 01 12456777
Q ss_pred hhhc---cCceEEEEcCC-CCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEec
Q 020968 178 ALAD---ENTVALVIINP-GNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGS 252 (319)
Q Consensus 178 ~~l~---~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s 252 (319)
+.++ ++..+|++... ..-.|. ..+...+++|.++|+++|+++|+||++.++...|..+. ...+.-.+. |+ .
T Consensus 196 ~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa-~~~~gv~PD-i~--t 271 (428)
T PRK07986 196 RLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFA-CEHAGIAPD-IL--C 271 (428)
T ss_pred HHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeee-ecccCCCCC-EE--E
Confidence 7764 23445555542 444565 45668899999999999999999999977644443221 111221122 33 4
Q ss_pred CccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh------hhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968 253 ISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQFLKSSRK--LKRNSFLKS 316 (319)
Q Consensus 253 ~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l--~~~~~~~~~ 316 (319)
++|.+ ..| +.+|.+++.+ ++.+.+... ...+...++++..++...+ ++++++.++
T Consensus 272 ~gK~l-~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~ 335 (428)
T PRK07986 272 LGKAL-TGGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQ 335 (428)
T ss_pred echhh-hCCcccCcchhchH--------HHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence 89997 466 5788877743 466666431 2222334555555544433 344444443
No 340
>PRK06149 hypothetical protein; Provisional
Probab=99.02 E-value=5.9e-08 Score=99.48 Aligned_cols=249 Identities=13% Similarity=0.107 Sum_probs=137.4
Q ss_pred CCCeEeccCCCCCCCCCCC-CcHHHHHHHHHHhhcCCCCC-CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFR-TASVAVDAIVHSVRSARFNC-YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
+..++||..|... ++ -.|.+.+++.+++....... | . .+....+++.+.+.. +-..+.++++++|++
T Consensus 584 G~~ylD~~~~~~~----lGh~hp~v~~Ai~~q~~~l~~~~~~----~-~~~~~elae~L~~~~--p~~~~~v~f~~SGsE 652 (972)
T PRK06149 584 GRSYLDMVNNVTV----LGHGHPRLAAAAARQWSLLNTNSRF----H-YAAVAEFSERLAALA--PDGLDTVFLVNSGSE 652 (972)
T ss_pred CCEEEECCCCccc----cCCCCHHHHHHHHHHHHhccccccc----c-CHHHHHHHHHHHHhC--CCCcCEEEEeCCchH
Confidence 5667788766422 33 57899999998887533211 2 1 133344444444322 112468999999999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-C-----C--------eEEEEeccCC--CCCc-CC-----HHHHH
Q 020968 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHS-H-----L--------EVRHFDLLPA--KGWE-VD-----LDAVE 177 (319)
Q Consensus 122 ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g-----~--------~~~~~~~~~~--~~~~-~d-----~~~l~ 177 (319)
|+..+++... ....+|+...-+|++....+... + . .+..++.... ..|. .+ .+.++
T Consensus 653 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~ 732 (972)
T PRK06149 653 ANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVV 732 (972)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHH
Confidence 9999988432 12357777777777543222110 0 0 0122221110 0111 11 13333
Q ss_pred hhhc------cCceEEEEcCCCCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968 178 ALAD------ENTVALVIINPGNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (319)
Q Consensus 178 ~~l~------~~~~~v~l~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~ 250 (319)
+.++ ++..+|++.......| ...++.-++++.++|+++|+++|.||++.+|...|........++-...++
T Consensus 733 ~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv-- 810 (972)
T PRK06149 733 AQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII-- 810 (972)
T ss_pred HHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--
Confidence 3321 2344555544333345 566777799999999999999999999987755553222222222222233
Q ss_pred ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH--hhhhcCCcchHHHHHHHHHH--hccccccc
Q 020968 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS--FLNISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
+++|.+ ..|..+|.+++.+ ++.+.+.. ....+.+.++++..+....+ ++++++.+
T Consensus 811 -t~gK~l-g~G~Pl~av~~~~--------~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~ 869 (972)
T PRK06149 811 -TMAKGM-GNGHPLGAVITRR--------EIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQE 869 (972)
T ss_pred -Eecccc-cCCeeeEEEEEcH--------HHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 789996 4679999999854 46655542 11112345666665554443 34444443
No 341
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.02 E-value=6.6e-08 Score=90.90 Aligned_cols=220 Identities=17% Similarity=0.185 Sum_probs=125.7
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|--...- ---.|.+.+++.+++..-.. +.......+.+..+++.+.+..+ -..+.+++++++++|
T Consensus 47 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGseA 121 (445)
T PRK09221 47 DGRKILDGTAGLWCCNA-GHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELAP--GGLDHVFFTNSGSES 121 (445)
T ss_pred CCCEEEEccccHhhccC-CCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHH
Confidence 46778888777322111 13458888999988875321 11111112334446666554322 124689999999999
Q ss_pred HHHHHHHhcC--------CCCEEEEcCCCCcchHHHHh-hCCC------------eEEEEeccC-C--CCCcC-------
Q 020968 123 IEVILTVLAR--------PGANILLPRPGFPYYEARAT-HSHL------------EVRHFDLLP-A--KGWEV------- 171 (319)
Q Consensus 123 i~~~~~~l~~--------~gd~Vl~~~p~~~~~~~~~~-~~g~------------~~~~~~~~~-~--~~~~~------- 171 (319)
+..+++.... ...+|+....+|++....+. ..|. .+..++... . ..+..
T Consensus 122 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
T PRK09221 122 VDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGA 201 (445)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHH
Confidence 9999875431 12578888888876432221 1110 112222110 0 00110
Q ss_pred -CHHHHHhhhc----cCceEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968 172 -DLDAVEALAD----ENTVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (319)
Q Consensus 172 -d~~~l~~~l~----~~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~ 245 (319)
..+.+++.+. ++..+|++.......|.+. +.+-++++.++|+++|+++|+||++.++...|.... ...+.-.+
T Consensus 202 ~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~-~~~~gv~P 280 (445)
T PRK09221 202 ELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFA-AERFGVTP 280 (445)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhH-HHhcCCCC
Confidence 1346666664 2345566555566677754 566699999999999999999999987654443221 11122112
Q ss_pred CeEEEecCccccCCCcceeeEEEeeC
Q 020968 246 PVLTLGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 246 ~vi~~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
.+ -+++|.++...+.+|.+++.+
T Consensus 281 Di---~~~gK~l~gG~~Pi~av~~~~ 303 (445)
T PRK09221 281 DI---ITFAKGLTNGAIPMGAVIASD 303 (445)
T ss_pred CE---EEeccccccCcccceeeEEcH
Confidence 22 378999644437789988753
No 342
>PRK07036 hypothetical protein; Provisional
Probab=99.01 E-value=4.3e-08 Score=92.65 Aligned_cols=255 Identities=17% Similarity=0.157 Sum_probs=142.2
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
.+..++|+..|.-...-. --.|.+.+++.+++..... ..+.. ...+.+..+++.+.+... -..+.+++++++++
T Consensus 49 dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGse 123 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVG-YGREEMADAIADQARRLPYYTPFGD--MTNAPAAELAAKLAELAP--GDLNHVFLTTGGST 123 (466)
T ss_pred CCCEEEECcccHHhhcCC-CCCHHHHHHHHHHHHhCcccccccc--cCCHHHHHHHHHHHHhCC--CCcCEEEEeCCchH
Confidence 467788887663221111 3368899999988875321 11110 123445556666655322 12468999999999
Q ss_pred HHHHHHHHhc------C-C-CCEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCC--CCcCC------
Q 020968 122 AIEVILTVLA------R-P-GANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAK--GWEVD------ 172 (319)
Q Consensus 122 ai~~~~~~l~------~-~-gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~~d------ 172 (319)
|+..+++... . + ..+|+....+|++....+.. .+. .+..++..... .++..
T Consensus 124 Ave~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 203 (466)
T PRK07036 124 AVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCD 203 (466)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHH
Confidence 9999988642 1 2 26788888888775433221 111 12222211100 01111
Q ss_pred --HHHHHhhhc----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCc-ccCCC
Q 020968 173 --LDAVEALAD----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMG-VFGSI 244 (319)
Q Consensus 173 --~~~l~~~l~----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~~~ 244 (319)
.+.+++.+. ++..+|++.......|. ..++.-++++.++|++||+++|.||++.+|...|... ... .+.-.
T Consensus 204 ~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~~gv~ 282 (466)
T PRK07036 204 FLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFF-ASEAVFGIQ 282 (466)
T ss_pred HHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhh-hhhhhcCCC
Confidence 233444442 24455655554555576 4567779999999999999999999998875544322 111 12222
Q ss_pred CCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh--------hhhcCCcchHHHHHHHHHH--hccccc
Q 020968 245 VPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF--------LNISSDPATFIQFLKSSRK--LKRNSF 313 (319)
Q Consensus 245 ~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~q~~~~~~l--~~~~~~ 313 (319)
+.++ +++|.+ ..| +.+|.+++.+ ++.+.+... ...+.+.++++..+....+ ++++++
T Consensus 283 PDiv---t~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l 350 (466)
T PRK07036 283 PDII---TFAKGL-TSGYQPLGAVIISE--------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGL 350 (466)
T ss_pred CCEE---EEcccc-ccCccccEEEEEcH--------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCH
Confidence 2233 569995 557 5899999853 466655421 1123345666655544433 344444
Q ss_pred cc
Q 020968 314 LK 315 (319)
Q Consensus 314 ~~ 315 (319)
.+
T Consensus 351 ~~ 352 (466)
T PRK07036 351 CE 352 (466)
T ss_pred HH
Confidence 33
No 343
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.01 E-value=3.4e-08 Score=92.39 Aligned_cols=217 Identities=17% Similarity=0.147 Sum_probs=123.6
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|--..... --.|.+.+++++++.+...... .....+.+..+++.+..... -+.+.+++++++++|
T Consensus 42 dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseA 116 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHG-YNHPRLNAAATNQLAKMSHIMF--GGFTHEPAVELAQKLLEILP--PSLNKIFFADSGSVA 116 (429)
T ss_pred CCCEEEEccchHHhccCC-CCCHHHHHHHHHHHHhcCCccc--cccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCchHH
Confidence 467788887663111111 2358899999988876322111 00112333445555544221 134689999999999
Q ss_pred HHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHh-hCCC-------------eEEEEeccCCCCCc-----CCHHH
Q 020968 123 IEVILTVLAR-------P-GANILLPRPGFPYYEARAT-HSHL-------------EVRHFDLLPAKGWE-----VDLDA 175 (319)
Q Consensus 123 i~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~~~-----~d~~~ 175 (319)
+..+++.... + ..+|+....+|++....+. ..+- .+..++.. ...+. -+++.
T Consensus 117 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~l~~ 195 (429)
T PRK06173 117 VEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQP-SIKFGEEWNDEAIEP 195 (429)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCC-CcccchhHHHHHHHH
Confidence 9999876431 2 3578888888877321111 1110 01112211 00000 13556
Q ss_pred HHhhhc---cCceEEEEcCC-CCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968 176 VEALAD---ENTVALVIINP-GNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (319)
Q Consensus 176 l~~~l~---~~~~~v~l~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~ 250 (319)
+++.+. ++..++++.-. ....|.+ .++.-++++.++|++||+++|+||++.++...|..+. ...++-.+. |++
T Consensus 196 l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~PD-iv~ 273 (429)
T PRK06173 196 LQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFA-LEHAGVVPD-IMC 273 (429)
T ss_pred HHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchH-HHhcCCCCC-EEE
Confidence 667664 34455665542 5556765 6778899999999999999999999977644443221 111221122 433
Q ss_pred ecCccccCCCc-ceeeEEEee
Q 020968 251 GSISKRWIVPG-WRLGWLVTS 270 (319)
Q Consensus 251 ~s~sK~~~~~G-~r~G~i~~~ 270 (319)
++|.+ ..| +.++.+++.
T Consensus 274 --~gK~l-~gG~~p~~a~~~~ 291 (429)
T PRK06173 274 --IGKAL-TGGYLTLSATITT 291 (429)
T ss_pred --eehhh-hCCccccceEEec
Confidence 89997 466 467777764
No 344
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.00 E-value=7.1e-08 Score=92.94 Aligned_cols=141 Identities=16% Similarity=0.167 Sum_probs=104.3
Q ss_pred CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC---------C-------------------
Q 020968 82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR---------P------------------- 133 (319)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~---------~------------------- 133 (319)
.|...++...+++.+.+++.+..|.+ ...=.+|+|||.|+..++....+ .
T Consensus 114 ~~e~SP~~t~lE~~vi~~la~l~G~~--~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~ 191 (608)
T TIGR03811 114 AYESSPATSQMEEEVGKEFATLMGYK--NGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPT 191 (608)
T ss_pred ccccCchHHHHHHHHHHHHHHHhCCC--CCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccc
Confidence 45555677899999999999888765 23345889999887765433211 0
Q ss_pred ------------------------C------CEEEEcCCCCcchHHHHhhCCCe---EEEEeccCCCCCcCCHHHHHhhh
Q 020968 134 ------------------------G------ANILLPRPGFPYYEARATHSHLE---VRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 134 ------------------------g------d~Vl~~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
| -+|+++...|.++.+.+..+|+. ++.|+++ +++.+|++.|++.+
T Consensus 192 ~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD--~~~rmd~~~L~~~I 269 (608)
T TIGR03811 192 KEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVD--SNYRMDINELEKII 269 (608)
T ss_pred ccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecC--CCCcCCHHHHHHHH
Confidence 0 05778888899999999999995 7888875 45789999999887
Q ss_pred cc----C--ceEEEEcCCCCccccccCHHHHHHHHHHH---HHcCC--EEEEeCCCCCcc
Q 020968 181 DE----N--TVALVIINPGNPCGNVYTYQHLQKIAETA---KKLGI--MVIADEVYDHLA 229 (319)
Q Consensus 181 ~~----~--~~~v~l~~p~nptG~~~~~~~l~~i~~~~---~~~~~--~li~D~a~~~~~ 229 (319)
.+ + +-+|+-+..+..+|.+ +++++|+++| +++|+ ++.+|.||+++.
T Consensus 270 ~~~~~~g~p~~~VVataGTT~~Gai---Dpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 270 RKLAAEKTPILGVVGVVGSTEEGAV---DGIDKIVALRNKLMKEGIYFYLHVDAAYGGYG 326 (608)
T ss_pred HHHHhcCCCeEEEEEEcCCcCCccc---CCHHHHHHHHHHHHHcCCceeEeeeccccchh
Confidence 53 2 2345556668899999 6677777776 67887 699999999853
No 345
>PRK06917 hypothetical protein; Provisional
Probab=99.00 E-value=8.8e-08 Score=90.11 Aligned_cols=255 Identities=16% Similarity=0.107 Sum_probs=143.0
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..+||+..|--.... =--.|.+.+++.+++....+ .+... ...+.+..+++.+.+... -..+.+++++++++|
T Consensus 29 dG~~ylD~~~g~~~~~l-Gh~hp~v~~Ai~~ql~~~~~-~~~~~-~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEA 103 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGI-GHGVKEIADAIKEQAEEVSF-VYRSQ-FTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEA 103 (447)
T ss_pred CCCEEEECchhHHhccC-CCCCHHHHHHHHHHHhhCcC-ccccc-cCCHHHHHHHHHHHHhCC--CCCCEEEEeCChHHH
Confidence 46778888776322111 13368899999998876422 11111 113445556666655322 123589999999999
Q ss_pred HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHh-hCCCe------------EEEEeccCCCCC--cC--------
Q 020968 123 IEVILTVLAR-------PG-ANILLPRPGFPYYEARAT-HSHLE------------VRHFDLLPAKGW--EV-------- 171 (319)
Q Consensus 123 i~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~-~~g~~------------~~~~~~~~~~~~--~~-------- 171 (319)
+..+++.... +| .+|+....+|++....+. ..+.. +..++......+ ..
T Consensus 104 ve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 183 (447)
T PRK06917 104 NETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLA 183 (447)
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHH
Confidence 9999986521 23 678888888877543332 22211 111111000000 00
Q ss_pred CHHHHHhhhc----cCceEEEEcCCC-Ccccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968 172 DLDAVEALAD----ENTVALVIINPG-NPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (319)
Q Consensus 172 d~~~l~~~l~----~~~~~v~l~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~ 245 (319)
+.+.+++.++ ++..+|++.-.. +..|. ..+.+-++++.++|+++|+++|.||++.+|...|.... ...+.-.+
T Consensus 184 ~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a-~~~~gv~P 262 (447)
T PRK06917 184 CATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFA-MEHWGVEP 262 (447)
T ss_pred HHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhh-HHhcCCCC
Confidence 2355666664 234555555433 34455 55677899999999999999999999988654443221 11222222
Q ss_pred CeEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHh-----hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968 246 PVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 246 ~vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
.++ +++|.+ ..|. .+|.+++.+ ++.+.+... ...+.+.++++..+....+ ++++++.+
T Consensus 263 Di~---~~gK~l-~~G~~Pi~a~~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~ 328 (447)
T PRK06917 263 DIM---TLGKGL-GAGYTPIAATVVSD--------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPE 328 (447)
T ss_pred CEE---Eeeehh-ccCCcceEEEEEcH--------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHH
Confidence 233 579995 5575 899998853 466655421 1123345666655544433 34444443
No 346
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.99 E-value=3.4e-08 Score=84.55 Aligned_cols=191 Identities=18% Similarity=0.236 Sum_probs=123.6
Q ss_pred HHHHHHHHHHhhcC----CCCCCCC-CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 020968 65 SVAVDAIVHSVRSA----RFNCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL 139 (319)
Q Consensus 65 ~~~~~a~~~~~~~~----~~~~Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~ 139 (319)
..+++++++.--+. ....|+. +-|-+.|.+..|+.++. ...--+.-+. ++|+||..++..+++|||+.+.
T Consensus 38 ~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~a----E~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~ 112 (416)
T COG4100 38 KKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFGA----EAALVRPQII-SGTHAIACALFGILRPGDELLY 112 (416)
T ss_pred HHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhcc----ccceeeeeee-cchhHHHHHHHhccCCCCeEEE
Confidence 35666665432111 1235553 34656666666666632 2111122333 4689999999999999999874
Q ss_pred -cCCCCcchHHH----------HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC-CCccccccCHHHHHH
Q 020968 140 -PRPGFPYYEAR----------ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP-GNPCGNVYTYQHLQK 207 (319)
Q Consensus 140 -~~p~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p-~nptG~~~~~~~l~~ 207 (319)
..--|.....+ ++..|+....+++..+ ..+|.+.++..+++++++|-+... ..-.--.++.+++++
T Consensus 113 i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~--gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~ 190 (416)
T COG4100 113 ITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTAD--GKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEE 190 (416)
T ss_pred ecCCcchhHHHHhccCCCCcccHHHhCcceeecccccC--CcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHH
Confidence 44555544433 4566777777777543 469999999999999999887743 333333567799999
Q ss_pred HHHHHHHc--CCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc--eeeEEEee
Q 020968 208 IAETAKKL--GIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW--RLGWLVTS 270 (319)
Q Consensus 208 i~~~~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~--r~G~i~~~ 270 (319)
++++.++. |+++++|++|++|+-..++ .. .. ..+..+|+-|.=|. |+ --||+.+.
T Consensus 191 ~i~~vk~inpn~ivFVDNCYGEFvE~~EP-t~---vG---aDliAGSLIKNpGG-giaktGGYiaGk 249 (416)
T COG4100 191 MITFVKEINPNVIVFVDNCYGEFVEEKEP-TH---VG---ADLIAGSLIKNPGG-GIAKTGGYIAGK 249 (416)
T ss_pred HHHHHHhcCCCEEEEEeccchhhhhccCc-cc---cc---hhhhccceeeCCCC-ceeeccceeech
Confidence 99999875 7999999999998854322 22 12 23788899898433 22 12666653
No 347
>PRK07481 hypothetical protein; Provisional
Probab=98.99 E-value=1.4e-07 Score=88.93 Aligned_cols=228 Identities=16% Similarity=0.143 Sum_probs=129.7
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++|+..|--.... =--.|.+.+++++++......... .....+.+..+++.+.+..+. -..+.+++++++++|
T Consensus 40 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~~lae~L~~~~~~-~~~~~v~f~~sGsEA 116 (449)
T PRK07481 40 DGKKLLDGVGGLWNVNV-GHNREEVKEAIVRQLDELEYYSTF-DGTTHPRAIELSYELIDMFAP-EGMRRVFFSSGGSDS 116 (449)
T ss_pred CCCEEEECchhHHhhcC-CCCCHHHHHHHHHHHHhccceecc-cccCCHHHHHHHHHHHHhcCC-CCCCEEEEcCchHHH
Confidence 46778888766321111 134578889999888764321100 011224445566666553321 124689999999999
Q ss_pred HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCC--CCc-CCHHHH--
Q 020968 123 IEVILTVLAR-------PG-ANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAK--GWE-VDLDAV-- 176 (319)
Q Consensus 123 i~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~--~~~-~d~~~l-- 176 (319)
+..+++.... +| .+|+...-+|++....+... +. .+..++..... .|. -|++.+
T Consensus 117 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~ 196 (449)
T PRK07481 117 VETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELAR 196 (449)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHH
Confidence 9999886431 23 57888888887754322221 11 11222111000 011 133333
Q ss_pred ------Hhhhc----cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCC
Q 020968 177 ------EALAD----ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIV 245 (319)
Q Consensus 177 ------~~~l~----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~ 245 (319)
++.+. +++.+|++.-.....|. ..+..-++++.++|+++|+++|.||++.+|...|.... ...++-.+
T Consensus 197 ~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~gv~P 275 (449)
T PRK07481 197 ICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFG-SRGWGVKP 275 (449)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhH-hhhcCCCC
Confidence 33332 34555665544555576 45667799999999999999999999998755443221 11222222
Q ss_pred CeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHH
Q 020968 246 PVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIK 286 (319)
Q Consensus 246 ~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~ 286 (319)
.++ .++|.+ ..| +.+|.+++.+ ++.+.+.
T Consensus 276 Div---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~ 305 (449)
T PRK07481 276 DIM---CLAKGI-TSGYVPLGATMVNA--------RIADAFE 305 (449)
T ss_pred CEE---EEeecc-cCCCcCceEEEEcH--------HHHHHHh
Confidence 334 459995 456 5899999853 4666554
No 348
>PRK07480 putative aminotransferase; Validated
Probab=98.98 E-value=7.2e-08 Score=90.89 Aligned_cols=256 Identities=16% Similarity=0.156 Sum_probs=141.5
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..+||+..|--.... -.-.|.+.+++.+++....... .......+.+..+++.+.+..+ -+.+.+++++++++|
T Consensus 48 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseA 123 (456)
T PRK07480 48 EGNKILDGMAGLWCVNV-GYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSEA 123 (456)
T ss_pred CCCEEEEccchHHHhcC-CCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHH
Confidence 46678888766321111 1336889999999887643211 0001223445556666654332 134689999999999
Q ss_pred HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHH-hhCCCe------------EEEEeccCCC--CCcCC-------
Q 020968 123 IEVILTVLAR-------PG-ANILLPRPGFPYYEARA-THSHLE------------VRHFDLLPAK--GWEVD------- 172 (319)
Q Consensus 123 i~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~-~~~g~~------------~~~~~~~~~~--~~~~d------- 172 (319)
+..+++.... +| .+|+....+|++....+ ...|.. +..++....- .+..+
T Consensus 124 ~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 203 (456)
T PRK07480 124 NDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLA 203 (456)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHH
Confidence 9999875431 22 46888888887643222 111111 1111110000 00011
Q ss_pred -HHHHHhhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968 173 -LDAVEALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (319)
Q Consensus 173 -~~~l~~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~ 246 (319)
.+.+++.+. ++..+|++.......|.+ .+.+-++++.++|+++|+++|.||++.+|...|..+ ....++-.+.
T Consensus 204 ~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~PD 282 (456)
T PRK07480 204 AARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWF-GSQHFGIKPD 282 (456)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-hhhhcCCCCC
Confidence 245554442 345566665555556764 566669999999999999999999998875545322 1122222222
Q ss_pred eEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH----h-hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968 247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS----F-LNISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 247 vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
++ +++|.+ ..| +.+|.+++.+ ++.+.+.. . ...+.+.++++..+....+ ++++++.+
T Consensus 283 iv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~ 347 (456)
T PRK07480 283 LM---TIAKGL-TSGYIPMGAVGVGD--------RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVE 347 (456)
T ss_pred ee---eeehhh-ccCCccceEEEEcH--------HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence 33 579995 456 4899998853 46665521 1 2223445666666655544 34444443
No 349
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.98 E-value=1.1e-07 Score=89.80 Aligned_cols=256 Identities=15% Similarity=0.076 Sum_probs=144.0
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCC---CCCCcEEEeCCH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYK---LSPDDVYLTLGC 119 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~---~~~~~i~~~~G~ 119 (319)
++..++|+..|.-..... -..|.+.+++.+++..-.. ........+.+..+++.+.+..... -+.+.+++++++
T Consensus 62 dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~l~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sG 138 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFG-HAEPRIGAAIAAQAGELEQ--VMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNG 138 (472)
T ss_pred CCCEEEEcCccHHhccCC-CCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCc
Confidence 466788887773211111 3467888999888764211 1111111244555666665432210 123689999999
Q ss_pred HHHHHHHHHHhcC-------C-CCEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCC--CCcC-----
Q 020968 120 TQAIEVILTVLAR-------P-GANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAK--GWEV----- 171 (319)
Q Consensus 120 t~ai~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~--~~~~----- 171 (319)
++|+..+++.... + ..+|+....+|++....+... +. .+..++..... .++.
T Consensus 139 SEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~ 218 (472)
T PRK08742 139 SAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDY 218 (472)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHH
Confidence 9999999886531 2 368888888887754333222 11 11222211000 0011
Q ss_pred ---CHHHHHhhhc---cCceEEEEcC-CCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCC
Q 020968 172 ---DLDAVEALAD---ENTVALVIIN-PGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGS 243 (319)
Q Consensus 172 ---d~~~l~~~l~---~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 243 (319)
+++.+++.+. ++..+|++.- .....|. ..++.-++++.++|+++|+++|.||++.+|...|..+. ...++-
T Consensus 219 ~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a-~e~~gv 297 (472)
T PRK08742 219 ALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFA-CEQAGV 297 (472)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchH-HHhcCC
Confidence 2456666663 3445555554 2555676 55777799999999999999999999998866553321 222222
Q ss_pred CCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh-------hhhcCCcchHHHHHHHHHH--hccccc
Q 020968 244 IVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF-------LNISSDPATFIQFLKSSRK--LKRNSF 313 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~q~~~~~~l--~~~~~~ 313 (319)
.+.++ .++|.+ ..| +.+|.+++.+ ++.+.+... ...+.+.++++..+....+ ++++++
T Consensus 298 ~PDiv---~~gKgl-~gG~~Plaav~~~~--------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l 365 (472)
T PRK08742 298 MPDLL---CLSKGL-TGGFLPLSAVLATQ--------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDV 365 (472)
T ss_pred CCCEE---EEcccc-cCCCCCcceeeccH--------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCH
Confidence 23344 359995 557 4899998853 455555321 1223345666655544443 344444
Q ss_pred c
Q 020968 314 L 314 (319)
Q Consensus 314 ~ 314 (319)
.
T Consensus 366 ~ 366 (472)
T PRK08742 366 I 366 (472)
T ss_pred H
Confidence 3
No 350
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.97 E-value=2.1e-08 Score=91.05 Aligned_cols=239 Identities=17% Similarity=0.154 Sum_probs=138.3
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|.-..... --.|.+.+++++++..... ........+....+++.+.+..+. ..+.+++++++++|
T Consensus 14 dG~~~lD~~~~~~~~~lG-h~~p~i~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGseA 88 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLG-HNHPEIAEAIAEQANKLNY--VSFSGFTHPEAAELAEKLAELFPG--GLDRVFFANSGSEA 88 (339)
T ss_dssp TSEEEEESSHHHHTTTT--BT-HHHHHHHHHHHHHCSS--CSTTTSEEHHHHHHHHHHHHHSST--TEEEEEEESSHHHH
T ss_pred CCCEEEECCCCccceecC-CCccccchhHHHHhhhccc--ccccceeccchhhhhhhhhhcccc--ccceeeeccCchHH
Confidence 466788887663221111 2347888999988776432 121223345566677766664421 45799999999999
Q ss_pred HHHHHHHhc-------C-CCCEEEEcCCCCcchHHHHhh-CC------------CeEEEEeccCCCCCcCCHHH------
Q 020968 123 IEVILTVLA-------R-PGANILLPRPGFPYYEARATH-SH------------LEVRHFDLLPAKGWEVDLDA------ 175 (319)
Q Consensus 123 i~~~~~~l~-------~-~gd~Vl~~~p~~~~~~~~~~~-~g------------~~~~~~~~~~~~~~~~d~~~------ 175 (319)
+..+++... . ...+|+....+|++....+.. .+ ..+..+|.. ++..
T Consensus 89 ve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~~~ 161 (339)
T PF00202_consen 89 VEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-------DPAADEEEQA 161 (339)
T ss_dssp HHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-------CHHHHHHHHH
T ss_pred HHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-------ccchhhhHHH
Confidence 999998765 1 347899888888764322211 11 123444432 2222
Q ss_pred ----HHhh---h-ccCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968 176 ----VEAL---A-DENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (319)
Q Consensus 176 ----l~~~---l-~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~ 246 (319)
+++. . .++..++++.-.....|. .++.+-++++.++|+++|+++|.||++.++...|+.+ ....+.-.+.
T Consensus 162 ~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~PD 240 (339)
T PF00202_consen 162 CLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVDPD 240 (339)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSSSS
T ss_pred HHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ceecccccCc
Confidence 2222 2 334555655554444564 5566779999999999999999999999987666432 2222333233
Q ss_pred eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh-hhhcCCcchHHHHHHHHH
Q 020968 247 VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF-LNISSDPATFIQFLKSSR 306 (319)
Q Consensus 247 vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~ 306 (319)
++ + ++|.+ ..|+.+|.+++.+ ++.+.+... ...+...++++..+....
T Consensus 241 iv-~--~gK~l-~gG~p~sav~~~~--------~i~~~~~~~~~~~T~~g~p~~~aaa~~~ 289 (339)
T PF00202_consen 241 IV-T--FGKGL-GGGLPISAVLGSE--------EIMEAFQPGSHGSTFGGNPLSCAAALAT 289 (339)
T ss_dssp EE-E--EEGGG-GTTSSEEEEEEEH--------HHHTTSCTTSSTCTTTT-HHHHHHHHHH
T ss_pred cc-c--cccch-hhhhhcccccccc--------hhhccccccccccccccchHhhhhhhhH
Confidence 44 3 46996 4569999999853 344444221 122334455555554443
No 351
>PRK07483 hypothetical protein; Provisional
Probab=98.97 E-value=9.2e-08 Score=89.88 Aligned_cols=255 Identities=18% Similarity=0.175 Sum_probs=142.0
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|--...- =--.|.+.++++++++...+.. ......+....+++.+.+... -..+.+++++++++|
T Consensus 28 dG~~ylD~~~g~~~~~l-Gh~~p~v~~av~~ql~~~~~~~--~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEA 102 (443)
T PRK07483 28 TGKRYLDASGGAAVSCL-GHSHPRVIAAIHAQIDRLAYAH--TSFFTTEPAEALADRLVAAAP--AGLEHVYFVSGGSEA 102 (443)
T ss_pred CCCEEEEcCccHhhhcc-CCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcHHH
Confidence 46778888777322111 1345788899999887632111 111113444556666654322 124689999999999
Q ss_pred HHHHHHHhcC-------CC-CEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCCCC---cC-------
Q 020968 123 IEVILTVLAR-------PG-ANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAKGW---EV------- 171 (319)
Q Consensus 123 i~~~~~~l~~-------~g-d~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~~---~~------- 171 (319)
+..+++.... +| .+|+....+|++....+.. .|. .+..++....-+. ..
T Consensus 103 ve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (443)
T PRK07483 103 VEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQ 182 (443)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHH
Confidence 9999875431 23 5788888888765322221 111 1111211100000 00
Q ss_pred -CHHHHHhhhc----cCceEEEEcCCCC-cccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968 172 -DLDAVEALAD----ENTVALVIINPGN-PCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (319)
Q Consensus 172 -d~~~l~~~l~----~~~~~v~l~~p~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 244 (319)
.++.+++.+. ++..+|++....- ..|. ..+.+-++++.++|+++|+++|.||++.++...|.-+ ....+.-.
T Consensus 183 ~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv~ 261 (443)
T PRK07483 183 RLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLF-ACEEDGVA 261 (443)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHH-HHhhcCCC
Confidence 0245665443 2445555554332 3354 5577789999999999999999999999875554322 11122222
Q ss_pred CCeEEEecCccccCCCcc-eeeEEEeeCCCCCccchHHHHHHHHh-----hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968 245 VPVLTLGSISKRWIVPGW-RLGWLVTSDPNGILQDSGIVDSIKSF-----LNISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 245 ~~vi~~~s~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
+.++ +++|.+ ..|+ .+|.+++.+ ++.+.+... ...+.+.++++..+....+ ++++++.+
T Consensus 262 PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~ 328 (443)
T PRK07483 262 PDLV---TIAKGL-GAGYQPIGAVLASD--------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLA 328 (443)
T ss_pred CCee---eehhhh-ccCccccEEEEEcH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 2344 459995 5675 899999854 465555421 2223445666655544443 44444443
No 352
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.96 E-value=7.7e-08 Score=90.84 Aligned_cols=218 Identities=13% Similarity=0.091 Sum_probs=126.0
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAI 123 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai 123 (319)
+..++|+..|--...- ---.|.+.+++.++++.-.. ........+.+..+++.+.+..+ ...+.+++++++++|+
T Consensus 55 G~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~--~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGseAv 129 (460)
T PRK06916 55 GNEYYDGVSSIWLNVH-GHQVPELDEAIREQLNKIAH--STLLGLANVPSILLAEKLIEVVP--EGLKKVFYSDSGATAV 129 (460)
T ss_pred CCEEEEcchhHHHhhc-CCCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHHHH
Confidence 5667777655311000 13468889999998876321 11000112334445555544322 1236899999999999
Q ss_pred HHHHHHhcC-------C-CCEEEEcCCCCcchHHHHhhC-CC------------eEEEEeccCCC--CCc--------CC
Q 020968 124 EVILTVLAR-------P-GANILLPRPGFPYYEARATHS-HL------------EVRHFDLLPAK--GWE--------VD 172 (319)
Q Consensus 124 ~~~~~~l~~-------~-gd~Vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~--~~~--------~d 172 (319)
..+++.... + ..+|+....+|++....+... |. .+..++..... .+. -+
T Consensus 130 e~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK06916 130 EIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKH 209 (460)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHH
Confidence 999886432 3 368888888887744322221 11 11222211000 001 13
Q ss_pred HHHHHhhhc---cCceEEEEcC-CCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCe
Q 020968 173 LDAVEALAD---ENTVALVIIN-PGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPV 247 (319)
Q Consensus 173 ~~~l~~~l~---~~~~~v~l~~-p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~v 247 (319)
++.+++.++ ++..+|++.- .....|.+ .+.+-++++.++|+++|+++|.||++.++...|..+ ....+.-.+.+
T Consensus 210 ~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~-a~~~~gv~PDi 288 (460)
T PRK06916 210 LEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF-ACEHENVTPDI 288 (460)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh-HHHhcCCCCCe
Confidence 455666664 3455666554 35555764 577889999999999999999999998875544321 11122222223
Q ss_pred EEEecCccccCCCc-ceeeEEEeeC
Q 020968 248 LTLGSISKRWIVPG-WRLGWLVTSD 271 (319)
Q Consensus 248 i~~~s~sK~~~~~G-~r~G~i~~~~ 271 (319)
+ +++|.+ ..| +.+|.+++.+
T Consensus 289 v---~~gK~l-~gG~~Pi~av~~~~ 309 (460)
T PRK06916 289 M---TAGKGL-TGGYLPIAITVTTD 309 (460)
T ss_pred e---eeehhh-hcCccccceeeecH
Confidence 3 579996 467 5899999854
No 353
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.96 E-value=2e-07 Score=83.86 Aligned_cols=230 Identities=15% Similarity=0.061 Sum_probs=152.3
Q ss_pred eEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCC--HHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHH
Q 020968 47 LIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGI--LPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIE 124 (319)
Q Consensus 47 ~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~--~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~ 124 (319)
+.+-+.|+ ....++..+++...+.......|.-..|. .+++ .+++.+.. -...+.++++++.+.|+.
T Consensus 29 v~~t~lG~------s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~-~~~~~~~~----~~~aea~~ivnnn~aAVl 97 (395)
T COG1921 29 VLMTNLGR------SLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLT-ELAELLCG----LTGAEAAAIVNNNAAAVL 97 (395)
T ss_pred heeccCCC------ccCCHHHHHHHHHHhcccceeeeecccchhhHHHH-HHHHHHhc----ccchhheeeECCcHHHHH
Confidence 34445565 34568888899888776543355443332 2333 34444422 224678999999999999
Q ss_pred HHHHHhcCCCCEEEEc---C-CCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcccccc
Q 020968 125 VILTVLARPGANILLP---R-PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVY 200 (319)
Q Consensus 125 ~~~~~l~~~gd~Vl~~---~-p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 200 (319)
+++.++.+++..|+-- . +..++...+++..|.+++.+.... .-...+++.++.+++.+++-++-+|- |..
T Consensus 98 l~~~al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne~ta~llkV~s~~~-~f~- 171 (395)
T COG1921 98 LTLNALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINENTALLLKVHSSNY-GFT- 171 (395)
T ss_pred HHHhhhccCCeEEEEccccccCCCCChhHHHHHcCCEEEEecccC----cCCHHHHHHHhccCCeeEEEEeeccc-ccc-
Confidence 9999987644444311 1 577788999999999999887532 25788899999999988876655542 322
Q ss_pred CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchH
Q 020968 201 TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSG 280 (319)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~ 280 (319)
..-.+++++++|+++|+++++|.+-+...... +.+..+-..+..++++|-.|.+ .|.+-|.+++. ++
T Consensus 172 ~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e---~~l~~~la~GaDLV~~SgdKll--gGPqaGii~Gk--------Ke 238 (395)
T COG1921 172 GMLSEEELVEIAHEKGLPVIVDLASGALVDKE---PDLREALALGADLVSFSGDKLL--GGPQAGIIVGK--------KE 238 (395)
T ss_pred ccccHHHHHHHHHHcCCCEEEecCCccccccc---cchhHHHhcCCCEEEEecchhc--CCCccceEech--------HH
Confidence 11237789999999999999999998866422 2233332333459999999995 56678999984 36
Q ss_pred HHHHHHHhhh-hcCCcchHHHHHHHHH
Q 020968 281 IVDSIKSFLN-ISSDPATFIQFLKSSR 306 (319)
Q Consensus 281 ~~~~~~~~~~-~~~~~~~~~q~~~~~~ 306 (319)
++.+++...- ...-+.++.-.++..+
T Consensus 239 lI~~lq~~~l~Ralrv~K~tla~l~~a 265 (395)
T COG1921 239 LIEKLQSHPLKRALRVDKETLAALEAA 265 (395)
T ss_pred HHHHHHhhhhhhhhhcCcHhHHHHHHH
Confidence 8888876543 2334444444444443
No 354
>PRK06062 hypothetical protein; Provisional
Probab=98.95 E-value=1.1e-07 Score=89.59 Aligned_cols=254 Identities=16% Similarity=0.137 Sum_probs=142.8
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..+||+..|.-...- =--.|.+.+++.+++..... +.+ ....+.+..+++.+.+..+ -+.+.+++++++++|
T Consensus 51 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEA 124 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNI-GHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAP--GDLSKVFFTNGGADA 124 (451)
T ss_pred CCCEEEEcccCHHhhcC-CCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCChHHH
Confidence 36678888776322111 13357899999988876322 121 1223445556666654322 124689999999999
Q ss_pred HHHHHHHhcC--CCCEEEEcCCCCcchHHHHh-hCCC-----------eEEEEeccCCCC--Cc--CC-------HHHHH
Q 020968 123 IEVILTVLAR--PGANILLPRPGFPYYEARAT-HSHL-----------EVRHFDLLPAKG--WE--VD-------LDAVE 177 (319)
Q Consensus 123 i~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~-~~g~-----------~~~~~~~~~~~~--~~--~d-------~~~l~ 177 (319)
...+++.... ...+|+.....|++....+. ..+. .+..++...... |. -| ++.++
T Consensus 125 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le 204 (451)
T PRK06062 125 NEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLE 204 (451)
T ss_pred HHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHH
Confidence 9999886432 23678888888877543332 1111 111111110000 10 12 56677
Q ss_pred hhhc----cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEec
Q 020968 178 ALAD----ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGS 252 (319)
Q Consensus 178 ~~l~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s 252 (319)
+.++ ++..+|++.......|.+ .+..-++++.++|+++|+++|+||++..|...|..+ ....+.-.+.++ +
T Consensus 205 ~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~~~~gv~PDi~---t 280 (451)
T PRK06062 205 RVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPDLI---T 280 (451)
T ss_pred HHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-HHHhcCCCCCee---e
Confidence 7664 234455555445555765 467779999999999999999999999875444321 111122112233 6
Q ss_pred CccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHHh---hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968 253 ISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKSF---LNISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 253 ~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
++|.+ ..| +.+|.+++.+ ++.+.+... ...+.+.++++..+....+ ++++++.+
T Consensus 281 ~gK~l-ggG~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~ 340 (451)
T PRK06062 281 FAKGV-NSGYVPLGGVAISE--------AIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVE 340 (451)
T ss_pred echhh-hcCCcCcEEEEEcH--------HHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 89996 456 4899998853 466655421 2223344555554444433 34444433
No 355
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=98.95 E-value=1.1e-08 Score=93.79 Aligned_cols=178 Identities=13% Similarity=0.067 Sum_probs=112.9
Q ss_pred CCcHHHHHHHHHHhhcC-CCCCCCC--CcCCHHHHHHHHHHHhhhCCCCCC-CCcEEEe-CCHHHHHHHHHHHhcCCCCE
Q 020968 62 RTASVAVDAIVHSVRSA-RFNCYSS--TVGILPARRAIADYLNRDLPYKLS-PDDVYLT-LGCTQAIEVILTVLARPGAN 136 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~-~~~~Y~~--~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~~-~G~t~ai~~~~~~l~~~gd~ 136 (319)
..++++++++.+....- ...++++ ..-+.+.|+.+++++ +.. ..+|+++ +++|.+++.++.++..+ +.
T Consensus 13 ~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~ 85 (361)
T TIGR01366 13 KVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELF------SLPDGYEVILGNGGATAFWDAATFGLIEK-KS 85 (361)
T ss_pred CCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchhHHHHHHHHhcccc-cc
Confidence 56788888876431110 0123333 233567777777777 333 3478886 55999999999998743 34
Q ss_pred EEEcCCCCc-chHHHHhhC--CCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHH
Q 020968 137 ILLPRPGFP-YYEARATHS--HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213 (319)
Q Consensus 137 Vl~~~p~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~ 213 (319)
+++..-.|. .+...+... +.++..++... +..++ ..+.+++++|++++..|.||.+.+ +++| ++
T Consensus 86 l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~lV~~~h~et~tG~~~p---i~~I---~~ 152 (361)
T TIGR01366 86 LHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPE-----PQADPGVDVIAWAHNETSTGVAVP---VRRP---EG 152 (361)
T ss_pred cEEecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCC-----CccCCCCCEEEEcccCCccceecc---cccc---cc
Confidence 444455553 244445442 22556665532 21222 234568899999999999999977 4444 47
Q ss_pred HcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968 214 KLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (319)
Q Consensus 214 ~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~ 269 (319)
++|+++++|.+.+. +..+..+.. -.+++.|..|.++.+|- ++.+++
T Consensus 153 ~~g~~~iVDavqs~----g~~~idv~~-----~D~~~~s~~K~lg~~~G-l~~~~~ 198 (361)
T TIGR01366 153 SDDALVVIDATSGA----GGLPVDIAE-----TDVYYFAPQKNFASDGG-LWLAIM 198 (361)
T ss_pred cCCCeEEEEcCccc----cCCCCCHHH-----CCEEEEEchhhcCCCCc-eEEEEE
Confidence 88999999999987 334444432 13789999999988752 454444
No 356
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.94 E-value=2e-09 Score=95.69 Aligned_cols=227 Identities=17% Similarity=0.108 Sum_probs=53.6
Q ss_pred CCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHH-HHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 020968 61 FRTASVAVDAIVHSVRSARFNCYSSTVGILPARR-AIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANILL 139 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~-~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~ 139 (319)
.+.++++.+++.+.........|.-..|-..-|. .+.+++... ...+..+++++...|+.+++.++. +|.+|++
T Consensus 16 s~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~l----tgAeaA~VvNnnaAAv~L~l~~la-~~~EvIv 90 (367)
T PF03841_consen 16 SPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCEL----TGAEAALVVNNNAAAVLLALNTLA-KGKEVIV 90 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccc-ccccccc
Confidence 3566788888877665543345543333222221 123333221 245678888998999999998886 5666776
Q ss_pred cCCCC------cchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc--cccccCHHHHHHHHHH
Q 020968 140 PRPGF------PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP--CGNVYTYQHLQKIAET 211 (319)
Q Consensus 140 ~~p~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np--tG~~~~~~~l~~i~~~ 211 (319)
..-.- .....+.+..|.+++.+.... .-.++++++++++++.+++-.+++|- .|..=. -.+++++++
T Consensus 91 sRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el~~l 165 (367)
T PF03841_consen 91 SRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEELAEL 165 (367)
T ss_dssp ---------------------------------------------------------------------------HHHHH
T ss_pred cccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccc-ccHHHHHHH
Confidence 55322 224567788899998887642 24678899999999999999998775 343311 358999999
Q ss_pred HHHcCCEEEEeCCCCCcc----CCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH
Q 020968 212 AKKLGIMVIADEVYDHLA----FGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287 (319)
Q Consensus 212 ~~~~~~~li~D~a~~~~~----~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~ 287 (319)
+++|++++++|..-+.+. ++-...+.+..+-..+-.++++|-.|.++. -+.|.+++. .++++++++
T Consensus 166 a~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGG--PQaGiI~Gk--------k~lI~~lk~ 235 (367)
T PF03841_consen 166 AKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGG--PQAGIIVGK--------KELIEKLKK 235 (367)
T ss_dssp HHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS---S-EEEEEE--------HHHHHHHHH
T ss_pred HhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCC--CCeEEEEeC--------HHHHHHHhh
Confidence 999999999999885443 111122345555444556999999999655 458999985 479999887
Q ss_pred hhh-hcCCcchHHHHHHHHHH
Q 020968 288 FLN-ISSDPATFIQFLKSSRK 307 (319)
Q Consensus 288 ~~~-~~~~~~~~~q~~~~~~l 307 (319)
..- ...-++++...++...+
T Consensus 236 ~pl~RalrvdK~tla~L~atL 256 (367)
T PF03841_consen 236 HPLGRALRVDKLTLAALEATL 256 (367)
T ss_dssp HHHTTT-B--HHHHHHHHHHH
T ss_pred CCCcceEeeCHHHHHHHHHHH
Confidence 543 24456777777766654
No 357
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.93 E-value=1.4e-07 Score=89.06 Aligned_cols=254 Identities=13% Similarity=0.067 Sum_probs=143.8
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..++||..|.-...- ---.|.+.+++.+++...... .......+.+..+++.+.+... ...+.+++++++++|
T Consensus 45 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~~--~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEA 119 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVF-GHANPRINQRIKDQVDQLEHV--ILAGFSHEPVIELSERLVKITP--PGLSRCFYADNGSSA 119 (466)
T ss_pred CCCEEEEcchhHHhhcC-CCCCHHHHHHHHHHHHhcCCc--cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHH
Confidence 46778888777322111 133578899999988763211 1111123445556666654221 134689999999999
Q ss_pred HHHHHHHhc------C-C-CCEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCC--CCcC--------
Q 020968 123 IEVILTVLA------R-P-GANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAK--GWEV-------- 171 (319)
Q Consensus 123 i~~~~~~l~------~-~-gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~~-------- 171 (319)
+..+++... . + ..+|+....+|++....+.. .+. .+..++..... .++.
T Consensus 120 ve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 199 (466)
T PRK07030 120 IEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRR 199 (466)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHH
Confidence 999988652 1 2 35788888888775433222 111 11112211000 0011
Q ss_pred CHHHHHhhhc---cCceEEEEcC-CCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC
Q 020968 172 DLDAVEALAD---ENTVALVIIN-PGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP 246 (319)
Q Consensus 172 d~~~l~~~l~---~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~ 246 (319)
+++.+++.+. ++..+|++.- .....|. ..+..-++++.++|+++|+++|.||++.+|...|.-+ ....++-.+.
T Consensus 200 ~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~-a~~~~gv~PD 278 (466)
T PRK07030 200 MFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMF-ACEQAGIRPD 278 (466)
T ss_pred HHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccch-HHHhcCCCCC
Confidence 2455666664 3445555554 2444565 5566779999999999999999999999876555321 1122222233
Q ss_pred eEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH--------hhhhcCCcchHHHHHHHHHH--hcccccc
Q 020968 247 VLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS--------FLNISSDPATFIQFLKSSRK--LKRNSFL 314 (319)
Q Consensus 247 vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l--~~~~~~~ 314 (319)
++ .++|.+ ..| +.+|.+++.+ ++.+.+.. ....+.+.++++..+....+ ++++++.
T Consensus 279 iv---~~gKgl-~gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~ 345 (466)
T PRK07030 279 FL---CLSKAL-TGGYLPLAAVLTTD--------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVI 345 (466)
T ss_pred EE---eeehhc-cCCcccceEEEecH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 44 359995 468 5899999853 46665532 12223445666665555443 3444443
No 358
>PRK06148 hypothetical protein; Provisional
Probab=98.92 E-value=1.3e-07 Score=97.08 Aligned_cols=250 Identities=14% Similarity=0.081 Sum_probs=139.9
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCC-CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFN-CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
+..++||..|.... --..|.+.+++.+++.....+ .|. .+.+..+++.+.+... -..+.++++++|++|
T Consensus 623 G~~ylD~~~g~~~l---GH~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGsEA 692 (1013)
T PRK06148 623 GRAYLDCFNNVCHV---GHAHPRVVAAAARQAARLNTNTRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGSEA 692 (1013)
T ss_pred CCEEEEcccChhhc---CCCCHHHHHHHHHHHhhcCCcCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHH
Confidence 55577776663221 234688999999988753221 222 2344455555544322 123679999999999
Q ss_pred HHHHHHHhcC--CCCEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccC--CCCCcC-C-------HHHHH
Q 020968 123 IEVILTVLAR--PGANILLPRPGFPYYEARATH-SHL------------EVRHFDLLP--AKGWEV-D-------LDAVE 177 (319)
Q Consensus 123 i~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~--~~~~~~-d-------~~~l~ 177 (319)
+..+++.... ...+|+....+|++....+.. .+. .+..++... ...|.. + .+.++
T Consensus 693 ~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 772 (1013)
T PRK06148 693 NSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVA 772 (1013)
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHH
Confidence 9999886532 236788888888764322111 110 111111100 001111 1 13344
Q ss_pred hhhc------cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEE
Q 020968 178 ALAD------ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTL 250 (319)
Q Consensus 178 ~~l~------~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~ 250 (319)
+.+. +++.+|++.......|. ..++.-++++.++|+++|+++|.||++.+|...|........++-.+.++
T Consensus 773 ~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv-- 850 (1013)
T PRK06148 773 EQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV-- 850 (1013)
T ss_pred HHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee--
Confidence 4442 23455555544433454 56777799999999999999999999998865553222222222222233
Q ss_pred ecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHh--hhhcCCcchHHHHHHHHHH--hccccccc
Q 020968 251 GSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSF--LNISSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 251 ~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
+++|.+ ..|+.+|.+++.. ++.+.+... ...+.+.++++..+....+ ++++++.+
T Consensus 851 -t~gK~l-ggG~Plgav~~~~--------ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~ 909 (1013)
T PRK06148 851 -TMGKPI-GNGHPMGAVVTTR--------EIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQR 909 (1013)
T ss_pred -eecccc-cCCcceEEEEEcH--------HHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHH
Confidence 569995 5689999999853 465555421 1123345666655544433 44444443
No 359
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.88 E-value=1.2e-07 Score=84.56 Aligned_cols=254 Identities=15% Similarity=0.102 Sum_probs=151.4
Q ss_pred CCCCeEeccCCC-CCCCCCCCCcHHHHHHHHHHhhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968 43 DTRPLIPLGHGD-PSAFPSFRTASVAVDAIVHSVRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (319)
Q Consensus 43 ~~~~~i~l~~g~-~~~~~~~~~~~~~~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~ 119 (319)
.+.++||+..+- +.. .. ...|++.+++.+...... .+.|. .++ . -.+++.+.+..+- -..+.|++++++
T Consensus 54 ~g~EyiD~~ssw~~~~-~G-hanpev~ral~~q~~k~~hs~~~~~---t~e-a-v~l~~~l~~~~~~-~~~~rvff~nsG 125 (433)
T KOG1401|consen 54 DGKEYIDFTSSWAVTI-LG-HANPEVARALAEQAKKLGHSSNGYF---TLE-A-VELEEVLSAVLGK-GSAERVFFCNSG 125 (433)
T ss_pred Ccceeeeeccceeccc-cC-CCCHHHHHHHHHHHhhheeccCccc---cHH-H-HHHHHHHHhcccC-CCccEEEEecCC
Confidence 467789988773 222 22 347889999988776532 12222 122 1 1233333332221 267899999999
Q ss_pred HHHHHHHHHHhcC---CC-----CEEEEcCCCCcch-HHHHhhCCCeEEEEeccCC-CCC----cCCHHHHHhhhccCc-
Q 020968 120 TQAIEVILTVLAR---PG-----ANILLPRPGFPYY-EARATHSHLEVRHFDLLPA-KGW----EVDLDAVEALADENT- 184 (319)
Q Consensus 120 t~ai~~~~~~l~~---~g-----d~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~-~~~----~~d~~~l~~~l~~~~- 184 (319)
|+|+..+++.-.+ .+ .+++....+|++- ...+...+...+..+.++- .++ --|...+++.++.+.
T Consensus 126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~ 205 (433)
T KOG1401|consen 126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG 205 (433)
T ss_pred cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence 9999999876532 11 2488777777653 2222222222222222110 000 017899999987644
Q ss_pred --eEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc
Q 020968 185 --VALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG 261 (319)
Q Consensus 185 --~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G 261 (319)
.+|++.-..-..|. ..+++-+..+.+.|+++++++|.||++.+|...+.... ...+.-.+. |.++.|.+ ..|
T Consensus 206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a-~e~~~~~PD---I~t~aK~L-~gG 280 (433)
T KOG1401|consen 206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWA-QEYFGVTPD---ITTVAKPL-GGG 280 (433)
T ss_pred ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHH-HHHhCcCCc---ceeehhhc-cCC
Confidence 56666555555564 55667799999999999999999999998776553321 111111111 34678994 678
Q ss_pred ceeeEEEeeCCCCCccchHHHHHHHHh----hhhcCCcchHHHHHHHHHH--hccccccccc
Q 020968 262 WRLGWLVTSDPNGILQDSGIVDSIKSF----LNISSDPATFIQFLKSSRK--LKRNSFLKSL 317 (319)
Q Consensus 262 ~r~G~i~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~~~~~~l--~~~~~~~~~l 317 (319)
+.+|..++.+ ++.+.+..- +..+.+.++++..+....+ +++++|.+++
T Consensus 281 lPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~v 334 (433)
T KOG1401|consen 281 LPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNV 334 (433)
T ss_pred ceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHH
Confidence 9999998854 344444321 1223455677777666654 6778877765
No 360
>PLN02452 phosphoserine transaminase
Probab=98.84 E-value=2e-07 Score=85.21 Aligned_cols=197 Identities=11% Similarity=0.077 Sum_probs=124.7
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--------CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--------FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYL 115 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~ 115 (319)
...+++|+.|- ...|+.+++++.+.+-... ..+.++ -..++-+.+.+.+.+.++.+-+.+-+++
T Consensus 5 ~~~~~~f~pGP------~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~--~f~~i~~~~~~~L~~l~~~p~~y~v~~l 76 (365)
T PLN02452 5 QGRVFNFSAGP------ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGK--EFLSIIQKAEADLRELLDIPDNYEVLFL 76 (365)
T ss_pred CCceEeeeCCC------CCCCHHHHHHHHHHHhcccccCccccccCCCch--HHHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence 44578888886 4678999999987653211 112222 2234444444455554553323344566
Q ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCC--cCCHHHHHhhhccCceEEEEcC
Q 020968 116 TLGCTQAIEVILTVLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGW--EVDLDAVEALADENTVALVIIN 191 (319)
Q Consensus 116 ~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~v~l~~ 191 (319)
..|+|.++..++..++.+|+++++......+ +...++.+|...+.... +..++ .+++++++. +++.+.+.+++
T Consensus 77 ~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~v~~~h 153 (365)
T PLN02452 77 QGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWEL--TPDAKFVHICA 153 (365)
T ss_pred eCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcCC--CCCCcEEEECC
Confidence 7889999999999999999988877766644 56777888864443322 11221 356666532 34567888888
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
....||+.++ +++++. ++++|+|.+.... ..+..+..++ +.+.|..|.+|.+| +|.+++.
T Consensus 154 nETstGv~~~--~~~~i~------~~~lvVDa~Ss~g----~~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr 213 (365)
T PLN02452 154 NETIHGVEFK--DYPDVG------NVPLVADMSSNFL----SKPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIR 213 (365)
T ss_pred CCCCCcEecC--cccccC------CCeEEEECCcccc----CcccCHHHcC-----EEEEecccccCCCC--eEEEEEc
Confidence 8889999643 244443 3899999988763 2333333322 34469999998888 6777664
No 361
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.83 E-value=9.8e-08 Score=84.53 Aligned_cols=203 Identities=15% Similarity=0.153 Sum_probs=140.3
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLT 116 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~ 116 (319)
.+.+++||+..+.. .+--.+.+.+.....++...... |+.-.-+-++.+.+|+++ ..++-++.
T Consensus 92 ~G~~~~N~aS~NfL---~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~--------G~E~aivY 160 (467)
T KOG1358|consen 92 DGKDVLNFASANFL---GLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM--------GTEDAIVY 160 (467)
T ss_pred cCceeecccchhhh---hhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh--------CCcceeee
Confidence 36678888888743 35566777777666665543222 444444678899999998 44566666
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc------------
Q 020968 117 LGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT------------ 184 (319)
Q Consensus 117 ~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~------------ 184 (319)
+-+..++..++.++++.||.|.+..-.........+...-.+.++..+ |.++++..+.+.+
T Consensus 161 s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~ 233 (467)
T KOG1358|consen 161 SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALT 233 (467)
T ss_pred ccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccc
Confidence 777888999999999999999998888877777777777777766542 6666666543211
Q ss_pred eE-EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCC--CCCCCCcccCCCCCeEEEecCccccCCCc
Q 020968 185 VA-LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN--TPFVPMGVFGSIVPVLTLGSISKRWIVPG 261 (319)
Q Consensus 185 ~~-v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~--~~~~~~~~~~~~~~vi~~~s~sK~~~~~G 261 (319)
+. +++..-.-++|.+.+ +.+|+++..+|...+|+||.|+.-..+. +....-......+-.++++|+.-+++..|
T Consensus 234 Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G 310 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG 310 (467)
T ss_pred eEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC
Confidence 33 344445668999955 8999999999999999999998755443 22211111222233588899998876666
Q ss_pred ceeeEEEe
Q 020968 262 WRLGWLVT 269 (319)
Q Consensus 262 ~r~G~i~~ 269 (319)
|+.++
T Consensus 311 ---gFc~G 315 (467)
T KOG1358|consen 311 ---GFCAG 315 (467)
T ss_pred ---ceeec
Confidence 77776
No 362
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.83 E-value=5.7e-07 Score=85.00 Aligned_cols=220 Identities=17% Similarity=0.169 Sum_probs=124.8
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC-CCcEEEe-CCHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYLT-LGCTQ 121 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~~-~G~t~ 121 (319)
+..++|+..|--.... =--.|.+.+++++++..... +.......+.+..+++.+......... .+.++++ +++++
T Consensus 62 G~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSE 138 (464)
T PRK06938 62 GRQFIDCLAGAGTLAL-GHNHPVVIEAIQQVLADELP--LHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTD 138 (464)
T ss_pred CCEEEEccCCcccccc-CCCCHHHHHHHHHHHHhhhc--ccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHH
Confidence 6667888766422111 13467899999998864221 111111224444455555442211111 1356665 68999
Q ss_pred HHHHHHHHhcC-C-CCEEEEcCCCCcchHHHHhh-CCC------------eEEEEeccCCCC--Cc--------CCHHHH
Q 020968 122 AIEVILTVLAR-P-GANILLPRPGFPYYEARATH-SHL------------EVRHFDLLPAKG--WE--------VDLDAV 176 (319)
Q Consensus 122 ai~~~~~~l~~-~-gd~Vl~~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~--~~--------~d~~~l 176 (319)
|+..+++.... . ..+|+....+|++....+.. .+. ++..++...... +. .+.+.+
T Consensus 139 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 218 (464)
T PRK06938 139 AVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYL 218 (464)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHH
Confidence 99999886432 2 36788888888775433222 110 122232211000 00 125667
Q ss_pred Hhhhcc------CceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968 177 EALADE------NTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (319)
Q Consensus 177 ~~~l~~------~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~ 249 (319)
++.+.+ ++.+|++.-.....|.+ .+..-++++.++|+++|+++|.||++.+|...|.-+ ....++-.+.++
T Consensus 219 ~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~e~~gv~PDiv- 296 (464)
T PRK06938 219 ENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF-AFEHAGIIPDVV- 296 (464)
T ss_pred HHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH-HHHhcCCCCCEE-
Confidence 777652 34555554434444664 567889999999999999999999999886555321 112222222344
Q ss_pred EecCccccCCCcceeeEEEeeC
Q 020968 250 LGSISKRWIVPGWRLGWLVTSD 271 (319)
Q Consensus 250 ~~s~sK~~~~~G~r~G~i~~~~ 271 (319)
.++|.+ ..|+.+|.+++.+
T Consensus 297 --~~gKgl-ggG~PlsAv~~~~ 315 (464)
T PRK06938 297 --VLSKAI-GGSLPLAVVVYRE 315 (464)
T ss_pred --Eeeccc-cCCCceEEEeehh
Confidence 359996 4689999999853
No 363
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.80 E-value=2.8e-07 Score=86.43 Aligned_cols=208 Identities=13% Similarity=0.149 Sum_probs=116.0
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQA 122 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~a 122 (319)
.+..+|||..|--.... ---.|.+.+++.+++.... .+.. ....+..+++.+.+... ..+.+++++++++|
T Consensus 46 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~--~~~~---~~~~~~~la~~l~~~~p---~~~~v~f~~sGseA 116 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGL-GHAYPPVVEAVREALQDGC--NFTR---PSAIELDAAESFLELID---GADMVKFCKNGSDA 116 (431)
T ss_pred CCCEEEEccccccchhc-CCCCHHHHHHHHHHHHhCc--CCCC---CCHHHHHHHHHHHHhCC---ccceEEEecCHHHH
Confidence 46778888776422111 1345789999999887643 2321 12233334444443221 23689999999999
Q ss_pred HHHHHHHhcC-CC-CEEEEc-CCCCcchHHHHh-----hCCCe--EEEEeccCCCCCcCCHHHHHhhhcc---CceEEEE
Q 020968 123 IEVILTVLAR-PG-ANILLP-RPGFPYYEARAT-----HSHLE--VRHFDLLPAKGWEVDLDAVEALADE---NTVALVI 189 (319)
Q Consensus 123 i~~~~~~l~~-~g-d~Vl~~-~p~~~~~~~~~~-----~~g~~--~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l 189 (319)
+..+++.... .| .+|+.. .-.|..+..... ..+.. .......-. .-|++.+++.++. +..+|++
T Consensus 117 ~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~~~~aavi~ 193 (431)
T PRK06209 117 TSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR---YNDIASLEALFEDHPGRIACVIL 193 (431)
T ss_pred HHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC---CCCHHHHHHHHHhCCCCEEEEEE
Confidence 9999885431 33 345443 222322110000 00100 000000000 1278888887752 3344444
Q ss_pred cCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (319)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~ 269 (319)
-|- .|...+...++++.++|+++|+++|+||++.++...+.. ....+.-.+. +.+++|.++ .|+.+|.+++
T Consensus 194 -Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g--~~~~~gv~PD---i~t~gK~lg-gG~p~~av~~ 264 (431)
T PRK06209 194 -EPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRG--AQKLYGIVPD---LSCFGKALG-NGFAVSALAG 264 (431)
T ss_pred -ccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcch--hhHHhCCCcc---eeeehhhhc-CCcccEEEEE
Confidence 442 244667788999999999999999999998776432111 1111111112 256899975 5788999998
Q ss_pred eC
Q 020968 270 SD 271 (319)
Q Consensus 270 ~~ 271 (319)
++
T Consensus 265 ~~ 266 (431)
T PRK06209 265 KR 266 (431)
T ss_pred HH
Confidence 53
No 364
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.78 E-value=1.4e-06 Score=82.22 Aligned_cols=220 Identities=17% Similarity=0.111 Sum_probs=123.3
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCC-CCcEEEeCCHHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLS-PDDVYLTLGCTQ 121 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-~~~i~~~~G~t~ 121 (319)
.+..++||..|--...- =--.|.+.+++++++........ .....+.+..+++.+.+..+.... ...+++++++++
T Consensus 56 dG~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~q~~~~~~~~~--~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsE 132 (459)
T PRK06931 56 EGNQYLDCLAGAGTLAL-GHNHPDVLQSIQDVLTSGLPLHT--LDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGAD 132 (459)
T ss_pred CCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhhccccc--cccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHH
Confidence 36678888777422111 13457899999988765321111 111235555666666553321101 123466689999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhC-C------------CeEEEEeccCCCC--Cc----CCHHHH----
Q 020968 122 AIEVILTVLA--RPGANILLPRPGFPYYEARATHS-H------------LEVRHFDLLPAKG--WE----VDLDAV---- 176 (319)
Q Consensus 122 ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~-g------------~~~~~~~~~~~~~--~~----~d~~~l---- 176 (319)
|+..+++... ....+|+....+|++....+... + ..+..++...... +. -+.+.+
T Consensus 133 Ave~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (459)
T PRK06931 133 AVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYF 212 (459)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHH
Confidence 9999988643 23467888888887765443321 1 1122222211000 00 012222
Q ss_pred Hhhhc------cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968 177 EALAD------ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (319)
Q Consensus 177 ~~~l~------~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~ 249 (319)
++.+. ++..+|++.-.....|. ..+..-++++.++|+++|+++|.||+..+|...|.. .....+.-.+.++
T Consensus 213 ~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~-~a~~~~gv~PDiv- 290 (459)
T PRK06931 213 ENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKM-FAFEHAGIEPDII- 290 (459)
T ss_pred HHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchH-HHhhhcCCCCCEE-
Confidence 22332 13455555544444465 456777999999999999999999999988655532 1222222222344
Q ss_pred EecCccccCCCcceeeEEEee
Q 020968 250 LGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 250 ~~s~sK~~~~~G~r~G~i~~~ 270 (319)
+++|.+ ..|+.+|.+++.
T Consensus 291 --t~gK~l-~gG~Pi~av~~~ 308 (459)
T PRK06931 291 --VMSKAV-GGGLPLAVLGIK 308 (459)
T ss_pred --Eecccc-cCCcceeeeeeH
Confidence 469996 457999987764
No 365
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.77 E-value=6.7e-07 Score=90.66 Aligned_cols=185 Identities=19% Similarity=0.245 Sum_probs=122.7
Q ss_pred eccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968 49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (319)
Q Consensus 49 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~-----g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~ 119 (319)
.++.|..+ .-.|+.+.+.+.+. ...+..|.|.. | +-++++.++++. +++..++-+..++
T Consensus 80 ~ig~G~y~----~~~P~vi~~~i~~~--~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt------G~~~anaSl~d~a 147 (954)
T PRK05367 80 YIGQGYYG----THTPPVILRNILEN--PAWYTAYTPYQPEISQGRLEALLNFQTMVADLT------GLEIANASLLDEA 147 (954)
T ss_pred ccCCCCCC----CcCcHHHHHHHHhC--cchhhccCCCChHHHHHHHHHHHHHHHHHHHHH------CCChhhccccccH
Confidence 34556543 23445554555442 22244565532 2 345666677776 5688899999999
Q ss_pred HHHHHHHHHHhc-CC--CCEEEEcCCCCcchHHH----HhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968 120 TQAIEVILTVLA-RP--GANILLPRPGFPYYEAR----ATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (319)
Q Consensus 120 t~ai~~~~~~l~-~~--gd~Vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 192 (319)
|++.+.++.++. .+ +++|++++..|+.+... ++..|++++.++... + .+ .++...+++.+|
T Consensus 148 TAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d--~~--------~~~~~~vlvq~p 215 (954)
T PRK05367 148 TAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--A--LD--------HDDVFGVLLQYP 215 (954)
T ss_pred HHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--C--CC--------cccEEEEEEecC
Confidence 999998888763 34 48999999999886644 467899999888632 1 11 224444555555
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccc-----cCCCcceeeEE
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKR-----WIVPGWRLGWL 267 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~-----~~~~G~r~G~i 267 (319)
|-+|.+. ++++|+++|+++|+++++|.....+..- .+...+.- .|+++|..|+ ||.|| .|++
T Consensus 216 -~~~G~i~---d~~~i~~~ah~~Gal~~vda~~~Al~~l----~~pge~Ga---Di~vgs~qkfg~P~g~GGP~--aGfl 282 (954)
T PRK05367 216 -GTSGEVR---DYTALIAAAHARGALVAVAADLLALTLL----TPPGEMGA---DIAVGSAQRFGVPMGFGGPH--AAYF 282 (954)
T ss_pred -CCCeeec---cHHHHHHHHHHcCCEEEEEehhhhccCC----CChhhcCC---CEEEeeCcccCCCCCCCCCC--EEEE
Confidence 6799995 5999999999999999999855332211 12233333 4999999998 66665 8888
Q ss_pred Eee
Q 020968 268 VTS 270 (319)
Q Consensus 268 ~~~ 270 (319)
.+.
T Consensus 283 avr 285 (954)
T PRK05367 283 AVR 285 (954)
T ss_pred EEC
Confidence 774
No 366
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.77 E-value=2.4e-07 Score=85.22 Aligned_cols=236 Identities=22% Similarity=0.232 Sum_probs=131.9
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCcC--CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-------CCC
Q 020968 64 ASVAVDAIVHSVRSARFNCYSSTVG--ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-------RPG 134 (319)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~Y~~~~g--~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-------~~g 134 (319)
.+++.+|++++++.-.+....-..+ ..+|-+.++++. + .-+-+.|++++|+++|+..+++... ++.
T Consensus 62 ~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~a----P-~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~ 136 (449)
T COG0161 62 RPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELA----P-EGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQ 136 (449)
T ss_pred CHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhC----C-CCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCc
Confidence 3788899999887632211111122 234444444444 1 1236799999999999999987652 222
Q ss_pred -CEEEEcCCCCcchHHHH-hhCC-------------CeEEEEeccCC--CC----Cc----CCHHHHHhhhcc---CceE
Q 020968 135 -ANILLPRPGFPYYEARA-THSH-------------LEVRHFDLLPA--KG----WE----VDLDAVEALADE---NTVA 186 (319)
Q Consensus 135 -d~Vl~~~p~~~~~~~~~-~~~g-------------~~~~~~~~~~~--~~----~~----~d~~~l~~~l~~---~~~~ 186 (319)
.+++.-...|++--..+ ..-| .....++.... .+ +. -..++|++.+.. +..+
T Consensus 137 r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IA 216 (449)
T COG0161 137 RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIA 216 (449)
T ss_pred ceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEE
Confidence 34777777775421111 1111 11222222110 01 11 124556665543 4445
Q ss_pred EEEcCC-CCc-ccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcce
Q 020968 187 LVIINP-GNP-CGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWR 263 (319)
Q Consensus 187 v~l~~p-~np-tG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r 263 (319)
.++.-| ..- .|+ ++++.-++++.++|++||+++|.||+-.+|...|+.+.. ..+.-.+.++ +++|.+...=+.
T Consensus 217 AfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~-e~~gi~PDi~---~~aKGLT~GY~P 292 (449)
T COG0161 217 AFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFAC-EHAGIVPDIL---CLAKGLTGGYLP 292 (449)
T ss_pred EEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhh-hhcCCCCCee---eecccccccchh
Confidence 555555 333 676 455666999999999999999999999998877754322 1122112234 568887666667
Q ss_pred eeEEEeeCCCCCccchHHHHHHHHh------hhhcCCcchHHHHHHHHHH--hcccccccc
Q 020968 264 LGWLVTSDPNGILQDSGIVDSIKSF------LNISSDPATFIQFLKSSRK--LKRNSFLKS 316 (319)
Q Consensus 264 ~G~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~q~~~~~~l--~~~~~~~~~ 316 (319)
+|.+++.+ ++.+.+..- .+.+...++++..+..+.+ +++++|.++
T Consensus 293 l~a~l~~~--------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~ 345 (449)
T COG0161 293 LSAVLTSD--------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLER 345 (449)
T ss_pred hHhHhhhH--------HHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHH
Confidence 77776643 466665543 1223445566655443333 566666654
No 367
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.71 E-value=4.8e-07 Score=81.38 Aligned_cols=174 Identities=20% Similarity=0.181 Sum_probs=121.9
Q ss_pred CCCCC---CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC-HHHHHHH---HHHHhc-CC----CCEEEEcCCCCcchH
Q 020968 81 NCYSS---TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEV---ILTVLA-RP----GANILLPRPGFPYYE 148 (319)
Q Consensus 81 ~~Y~~---~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G-~t~ai~~---~~~~l~-~~----gd~Vl~~~p~~~~~~ 148 (319)
+.|.| ..|+.++...+.+|+.+.- ..+.|-+.+. +.++=.. ++++.. .. .+.+++++..|....
T Consensus 96 HP~~pe~~vqG~l~li~~Lq~~L~~IT----G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP 171 (496)
T COG1003 96 HPFQPEEQVQGYLELIYELQEWLKEIT----GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP 171 (496)
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhc----CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh
Confidence 34544 3567788888888888754 3566666533 2333222 233332 22 368999999999888
Q ss_pred HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCc
Q 020968 149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL 228 (319)
Q Consensus 149 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~ 228 (319)
..+...|.+++.|+.+.++ .+|+++|++.+.++..++.+++||. .|.. .+.+.+|+++.+++|..+..|.|-..-
T Consensus 172 ASAam~G~~VV~V~~~~~G--~VDlddLk~k~~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA 246 (496)
T COG1003 172 ASAAMAGFKVVVVKCDENG--NVDLDDLRAKAEDNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLNA 246 (496)
T ss_pred hhHhhcCceEEEEecCCCC--CccHHHHHHHhccceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchhh
Confidence 9999999999999987554 5999999999999999999999974 3544 267999999999999999999988764
Q ss_pred cCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceeeEEEe
Q 020968 229 AFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLVT 269 (319)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i~~ 269 (319)
..+-..+.. + +-.|+=--++|+|+.| |-.+|=|.+
T Consensus 247 ~vG~~rPGd---~---G~DV~HlNLHKTF~iPHGGGGPG~GPvgV 285 (496)
T COG1003 247 IVGLARPGD---M---GFDVVHLNLHKTFCIPHGGGGPGAGPVGV 285 (496)
T ss_pred hhccccccc---c---ccceEEeecccccccCCCCCCCCCCceeh
Confidence 433222211 1 2225555788888765 555555543
No 368
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=98.62 E-value=1e-06 Score=80.61 Aligned_cols=177 Identities=16% Similarity=0.036 Sum_probs=113.3
Q ss_pred HHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCCc
Q 020968 67 AVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-RPGANILLPRPGFP 145 (319)
Q Consensus 67 ~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-~~gd~Vl~~~p~~~ 145 (319)
.++++++.+-.. .++++ ...++-+.+.+.+.+.++.+-+.+-++++.|+|.++.+++..++ ++|++|++.. .|.
T Consensus 19 ~~~~~~~~~~~~--~HRs~--~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG 93 (374)
T TIGR01365 19 SIEELKNAPLGR--SHRSK--LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG 93 (374)
T ss_pred hHHHHhhhhccc--CcCCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence 666666543321 23433 33445444555555555532223335668889999999999998 5888998865 554
Q ss_pred c-hH-HHHhhCCC-eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968 146 Y-YE-ARATHSHL-EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222 (319)
Q Consensus 146 ~-~~-~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 222 (319)
. +. .+++.+|+ ++..+... .+-.+++++++. + +.|++++.-..||+..+ ++++++.+ ++.++|+|
T Consensus 94 ~r~~~eia~~~g~~~v~~l~~~--~g~~~~~~~ve~--~---~~v~~vhnETSTGv~np---v~~i~~~~--~~~lliVD 161 (374)
T TIGR01365 94 KGWVTDVTKQLKLPDVRVLEAE--YGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVP---NGDFIPAD--REGLTICD 161 (374)
T ss_pred HHHHHHHHHhcCCCCcEEEcCC--CCCCCCHHHcCC--C---CCEEEecCCCchheecc---cccccccc--CCCcEEEE
Confidence 3 35 78888999 47777643 334678888873 1 23668888889999977 44444322 48999999
Q ss_pred CCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968 223 EVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 223 ~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
.+-+... .+..+. .-.+++.|.-|.+++|+ .+++++++
T Consensus 162 avSs~g~----~~l~~d-----~iDv~~tgsQK~L~~pp-Gls~v~vs 199 (374)
T TIGR01365 162 ATSAAFA----QDLDYH-----KLDVVTFSWQKVLGGEG-AHGMLILS 199 (374)
T ss_pred ccchhcC----CCCChh-----HCcEEEEechhccCCCC-ceEEEEEC
Confidence 9887632 222222 12388999999998864 25556554
No 369
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.62 E-value=3.8e-06 Score=83.93 Aligned_cols=233 Identities=16% Similarity=0.103 Sum_probs=131.6
Q ss_pred CcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcC----------
Q 020968 63 TASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLAR---------- 132 (319)
Q Consensus 63 ~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~---------- 132 (319)
..|++.+++.+++.+..+ +.......+-...+|+.+.+.-+ .-..+.++++++|++|+..+++...+
T Consensus 383 ~~p~I~~Ai~~Qa~rl~h--v~~~~~~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~ 459 (817)
T PLN02974 383 LQPELARAVAYAAGRYGH--VMFPENVHEPALRAAELLLGGPG-KGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLE 459 (817)
T ss_pred CCHHHHHHHHHHHhhCCc--cccCccCCHHHHHHHHHHHhccC-CCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCc
Confidence 479999999999876432 21111123445556666654211 00136899999999999998875421
Q ss_pred -----------CCCEEEEcCCCCcchHHHHh-hCCC---------e-----EEEEeccC------------CCC------
Q 020968 133 -----------PGANILLPRPGFPYYEARAT-HSHL---------E-----VRHFDLLP------------AKG------ 168 (319)
Q Consensus 133 -----------~gd~Vl~~~p~~~~~~~~~~-~~g~---------~-----~~~~~~~~------------~~~------ 168 (319)
...+|+....+|++--..+. ..+. . ...++... ..+
T Consensus 460 ~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~ 539 (817)
T PLN02974 460 NSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLE 539 (817)
T ss_pred ccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccc
Confidence 12468888888876322222 2111 0 00010000 000
Q ss_pred -----Cc-----CC------------HHHHHhhhc--------cCceEEEEcCC-CCcccccc-CHHHHHHHHHHHHHcC
Q 020968 169 -----WE-----VD------------LDAVEALAD--------ENTVALVIINP-GNPCGNVY-TYQHLQKIAETAKKLG 216 (319)
Q Consensus 169 -----~~-----~d------------~~~l~~~l~--------~~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~~~~~~ 216 (319)
|. ++ .+.+++.+. ++..++++.-. ..-.|+++ +..-++++.++|+++|
T Consensus 540 ~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~g 619 (817)
T PLN02974 540 GEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRK 619 (817)
T ss_pred ccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhC
Confidence 00 00 144555553 23345554442 45567654 6777999999999999
Q ss_pred CEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCc-ceeeEEEeeCCCCCccchHHHHHHHH-------h
Q 020968 217 IMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPG-WRLGWLVTSDPNGILQDSGIVDSIKS-------F 288 (319)
Q Consensus 217 ~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~~~~-------~ 288 (319)
+++|.||++.+|...|..+. ...++-.+.++ .++|.+ ..| +.+|.+++.+ ++.+.+.. .
T Consensus 620 ilLI~DEV~TGfGRtG~~fa-~e~~gv~PDIi---~~gKgL-tgG~~Plaa~l~~~--------~I~~~f~~~~~~~~~~ 686 (817)
T PLN02974 620 IPVIFDEVFTGLWRLGVESA-WELLGCKPDIA---CYAKLL-TGGLVPLAATLATE--------EVFEAFRGPSKLDALL 686 (817)
T ss_pred CEEEEeecccCCCcccchhh-HHhcCCCCCEE---eecccc-cCCCCccEEEEEcH--------HHHHhhccccccCCcc
Confidence 99999999999877664332 22222222334 479995 567 6999999854 46665531 1
Q ss_pred hhhcCCcchHHHHHHHHHH--hccc
Q 020968 289 LNISSDPATFIQFLKSSRK--LKRN 311 (319)
Q Consensus 289 ~~~~~~~~~~~q~~~~~~l--~~~~ 311 (319)
...+.+.++++..+....+ ++++
T Consensus 687 hg~Ty~gnpl~cAaala~L~~~~~~ 711 (817)
T PLN02974 687 HGHSYTAHPMGCAAAAKALQWYKDP 711 (817)
T ss_pred cCCCCCcCHHHHHHHHHHHHHHHcc
Confidence 2223445566655544433 3444
No 370
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.60 E-value=2e-06 Score=74.83 Aligned_cols=204 Identities=15% Similarity=0.172 Sum_probs=129.1
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhc---CCCCCCC-CCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRS---ARFNCYS-STVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~---~~~~~Y~-~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~ 119 (319)
+.++|.|+.+.-.. .++....+..+...+. +...... .....-++-+.+.+.+.... +....+++++.+.
T Consensus 29 p~~viyLdgnSLGa----~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLi--GA~~~Evvv~dtt 102 (407)
T COG3844 29 PGGVIYLDGNSLGA----RPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLI--GARAGEVVVTDTT 102 (407)
T ss_pred CCCeEEeecccccc----CchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhh--cCCCCceEEeCCc
Confidence 67899999888542 2212222222222221 1100000 11222333333444443332 3468899999999
Q ss_pred HHHHHHHHHHhc--CCCCEEEEcC-CCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968 120 TQAIEVILTVLA--RPGANILLPR-PGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (319)
Q Consensus 120 t~ai~~~~~~l~--~~gd~Vl~~~-p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 192 (319)
+-.++.++.+.. .+|++|++++ -+|+. ....+..++.. ..+ ...+.+.++++++.++...|++++.
T Consensus 103 s~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-~~~------~~~~~P~~~~~~~~dd~AvV~L~~V 175 (407)
T COG3844 103 SINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-YDL------EGVIAPRALEEAITDDVAVVLLSHV 175 (407)
T ss_pred chHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-ccc------eeeeChHHHHHhhccceEEEEeccc
Confidence 999999888765 3588888776 33322 23444555543 111 1235777999999999999999999
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCC-CcceeeEEEee
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIV-PGWRLGWLVTS 270 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~-~G~r~G~i~~~ 270 (319)
+.-||+.++ +.+|-+++++++++++.|-+|+. |.-+..+..... .+-|++..|.++. ||-..|..+.+
T Consensus 176 ~y~TGql~d---m~aiT~~AH~~galv~wDLAHsa----Gavp~~Lh~~ga---DfaigcsyKYLNgGPGapa~l~v~~ 244 (407)
T COG3844 176 NYKTGQLLD---MRAITALAHQHGALVGWDLAHSA----GAVPVDLHAAGA---DFAIGCSYKYLNGGPGAPAGLFVAP 244 (407)
T ss_pred cccccceee---HHHHHHHHHhcCceEEeehhccc----CCcceeecccCC---CeeeeeeceeccCCCCCceeEEecc
Confidence 999999966 89999999999999999999987 333344443333 4888999998766 67655555543
No 371
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.58 E-value=3.6e-06 Score=76.49 Aligned_cols=179 Identities=17% Similarity=0.150 Sum_probs=129.7
Q ss_pred cCCHHHHHHHHHHHhhhCCCCCCCCcE-EEeCCHHHHHHHHHHHhc----C-CC---CEEEEcCCCCcchHHHHhhCCCe
Q 020968 87 VGILPARRAIADYLNRDLPYKLSPDDV-YLTLGCTQAIEVILTVLA----R-PG---ANILLPRPGFPYYEARATHSHLE 157 (319)
Q Consensus 87 ~g~~~lr~~ia~~~~~~~g~~~~~~~i-~~~~G~t~ai~~~~~~l~----~-~g---d~Vl~~~p~~~~~~~~~~~~g~~ 157 (319)
++..++..++-+++...++.+ .+.+ ..|.|+++++.++-.... + .| ..++++...+..+.+.++..+++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~--~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~ 193 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP--SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVE 193 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC--ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEE
Confidence 466788888888877766655 3333 667888888555544331 1 23 46777788888999999999999
Q ss_pred EEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH-cCCEEEEeCCCCCccCC--CCC
Q 020968 158 VRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK-LGIMVIADEVYDHLAFG--NTP 234 (319)
Q Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~D~a~~~~~~~--~~~ 234 (319)
+..++.++ +.|.+|+.++.+.++++++.++..-|+.|+|.. ++++++.++..+ +++.+.+|.+-+.|.-. ...
T Consensus 194 l~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~ 269 (491)
T KOG1383|consen 194 LREVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLN 269 (491)
T ss_pred EEeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccccccC
Confidence 99999875 779999999999999999999999999999999 899999999998 99999999999998752 111
Q ss_pred CCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCC
Q 020968 235 FVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPN 273 (319)
Q Consensus 235 ~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~ 273 (319)
+..+ .+......=+--+-+|. |+.=-.+||++-.++.
T Consensus 270 ~~~f-dFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~ 306 (491)
T KOG1383|consen 270 EEEF-DFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKE 306 (491)
T ss_pred cccc-ccCCCCceeEeecccee-eeeecCcEEEEEcccc
Confidence 1111 12111111112234455 6654458898877654
No 372
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.56 E-value=3.5e-06 Score=85.35 Aligned_cols=181 Identities=19% Similarity=0.172 Sum_probs=117.2
Q ss_pred CCCcHHHHHHHHHHhhcCCCCCCCCC-----cC----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc
Q 020968 61 FRTASVAVDAIVHSVRSARFNCYSST-----VG----ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA 131 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~~~Y~~~-----~g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~ 131 (319)
...|+.+.+++.+...- +..|.|. .| +.++++.+++++ +++.+++-++.++|.+.++++.++.
T Consensus 115 ~~~P~~v~~~i~~~~~~--~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~ 186 (993)
T PLN02414 115 THVPPVILRNILENPGW--YTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNN 186 (993)
T ss_pred ccCCHHHHHHHHhChHH--HhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHh
Confidence 35677777777665332 2244443 22 456777788887 5788999999999999999887763
Q ss_pred -CC--CCEEEEcCCCCcchHHHH----hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968 132 -RP--GANILLPRPGFPYYEARA----THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (319)
Q Consensus 132 -~~--gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 204 (319)
++ +++|++++..|+.+...+ +..|++++.++.... + ...+....++ .+-.|-+|.+. +
T Consensus 187 ~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vl-vq~P~~~G~v~---d 251 (993)
T PLN02414 187 ILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVL-VQYPATDGEVL---D 251 (993)
T ss_pred cccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEE-EecCCCCeEEc---C
Confidence 43 478999999998875544 456888888876321 1 1112333444 33334689995 5
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCcccc---CCCcceeeEEEeeC
Q 020968 205 LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRW---IVPGWRLGWLVTSD 271 (319)
Q Consensus 205 l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~---~~~G~r~G~i~~~~ 271 (319)
+++|+++|+++|+++++ .+... ....- .+...+.- .|++++..|+. |..|-+.|++.+.+
T Consensus 252 v~~I~~~ah~~GaL~iV-aad~l-al~~l--~~pge~GA---Di~vgsgqKwg~P~G~GGP~aGflavr~ 314 (993)
T PLN02414 252 YAEFVKNAHANGVKVVM-ATDLL-ALTML--KPPGEWGA---DIVVGSAQRFGVPMGYGGPHAAFLATSQ 314 (993)
T ss_pred HHHHHHHHHHcCCEEEE-EECHH-HhcCC--CCHhhccC---cEEEECCCccccCCCCCCCCeeEEEECH
Confidence 99999999999999999 33322 11111 12223333 48899999984 11355588988753
No 373
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.56 E-value=5.2e-06 Score=75.41 Aligned_cols=195 Identities=14% Similarity=0.067 Sum_probs=119.5
Q ss_pred CeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCC--------CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC
Q 020968 46 PLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSAR--------FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL 117 (319)
Q Consensus 46 ~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~ 117 (319)
+.++|+.|- -.+|+.+.+++++.+.... ..++++ -..++-+.+.+.+++.++.+-+.+=+++..
T Consensus 4 ~~~nF~aGP------a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~--~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~G 75 (364)
T PRK12462 4 NQLNFSGGP------GALPDTVLEQVRQAVVELPETGLSVLGMSHRSS--WFSSLLAQAEADLRDLLGIPDEYGVVFLQG 75 (364)
T ss_pred ccceecCCC------cCCCHHHHHHHHHHHhcccccCccccccccccH--HHHHHHHHHHHHHHHHhCCCCCCeEEEEec
Confidence 356888876 3678889888887654311 122322 223444444445555555433344446667
Q ss_pred CHHHHHHHHHHHhcCCCCEEE--EcCCCCcc-hHHHHhhCCCeEEEEeccCCCC--CcCCHHHHHhhhccCceEEEEcCC
Q 020968 118 GCTQAIEVILTVLARPGANIL--LPRPGFPY-YEARATHSHLEVRHFDLLPAKG--WEVDLDAVEALADENTVALVIINP 192 (319)
Q Consensus 118 G~t~ai~~~~~~l~~~gd~Vl--~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~--~~~d~~~l~~~l~~~~~~v~l~~p 192 (319)
|+|.++.++...++.+|++++ +..-.|.. +...++.+| ++..+......+ ..++++.++ ++++.+.|.+++-
T Consensus 76 ggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~~d~~~v~~t~N 152 (364)
T PRK12462 76 GSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WDARAPFRHYVSN 152 (364)
T ss_pred cHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cCCCCcEEEEccC
Confidence 799999999999999999665 44444432 456677777 544443211112 234555542 2345677778887
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
...||+.++ ++.+.++.++|+|.+-..+. .+..+..+ .+++.|.-|.+|.|| ++.+++.
T Consensus 153 ETstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~-----dvi~agsQKnlgP~G--ltvvivs 211 (364)
T PRK12462 153 ETVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAY-----GMVYAHAQKNLGPAG--VTVAIIR 211 (364)
T ss_pred CCCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHc-----cEEEeeccccCCCCc--eEEEEEC
Confidence 889999876 22223589999999887633 22333333 388889999999777 4555553
No 374
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.55 E-value=2.4e-06 Score=75.99 Aligned_cols=242 Identities=19% Similarity=0.133 Sum_probs=144.6
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC--CCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA--RFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
.+..++|+-.|.....- -...|.+.+++.+++..- .+..|... -..++.++++..+ +-+-+.++++++++
T Consensus 48 ~G~ryLD~f~Gi~tvsl-GHchP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~------P~~l~~vfF~nsGs 119 (442)
T KOG1404|consen 48 EGRRYLDAFGGIVTVSL-GHCHPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKL------PGDLKVVFFVNSGS 119 (442)
T ss_pred CCceeehhhCCeEEEEc-CCCChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhC------CCCceEEEEecCCc
Confidence 46666777666432211 134578888888887542 23355543 3467777777777 33556799999999
Q ss_pred HHHHHHHHHhcC-CC-CEEEEcCCCCcchH-HHHhhCCCeEEEEecc-------------CCCC-CcCC-----H----H
Q 020968 121 QAIEVILTVLAR-PG-ANILLPRPGFPYYE-ARATHSHLEVRHFDLL-------------PAKG-WEVD-----L----D 174 (319)
Q Consensus 121 ~ai~~~~~~l~~-~g-d~Vl~~~p~~~~~~-~~~~~~g~~~~~~~~~-------------~~~~-~~~d-----~----~ 174 (319)
+|+.++++.... .| -.|+.-..+|.+.. ..+-..++.....+.. +..+ |+-+ . +
T Consensus 120 EANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~ 199 (442)
T KOG1404|consen 120 EANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAK 199 (442)
T ss_pred hHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHH
Confidence 999999876531 22 35666666775533 2333333333322211 0000 1111 1 3
Q ss_pred HHHhhhc---cCceEEEEc-CCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEE
Q 020968 175 AVEALAD---ENTVALVII-NPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLT 249 (319)
Q Consensus 175 ~l~~~l~---~~~~~v~l~-~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~ 249 (319)
++++.+. +++.+.++. ...--.|+ .++.--+++..++|+++|.++|.||+..+|...| .+..+...+-+=-
T Consensus 200 ~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG----~~wgfe~h~v~PD 275 (442)
T KOG1404|consen 200 ELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG----HMWGFESHGVVPD 275 (442)
T ss_pred HHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc----ccccccccCCCcc
Confidence 3333331 233444444 44555564 4566669999999999999999999999988766 3444444443334
Q ss_pred EecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhh--hcCCcchHHHHHHHH
Q 020968 250 LGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLN--ISSDPATFIQFLKSS 305 (319)
Q Consensus 250 ~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~q~~~~~ 305 (319)
|-+++|. ...|+.+|.++.. +++.+.+.+..+ .+.+.++++..+...
T Consensus 276 IvTmAKg-iGnG~Pl~AVvtt--------~EIa~v~~~~~~~fnTyggnP~a~avg~a 324 (442)
T KOG1404|consen 276 IVTMAKG-IGNGFPLGAVVTT--------PEIADVLNQKSSHFNTYGGNPVACAVGLA 324 (442)
T ss_pred HHHHHhh-ccCCCcceeeecC--------HHHHHHHHhccccccccCCCchhHHHHHH
Confidence 5689999 5778999999874 357777776552 234445555544333
No 375
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.53 E-value=1.5e-05 Score=75.06 Aligned_cols=187 Identities=16% Similarity=0.137 Sum_probs=102.7
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHH--HHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVD--AIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQ 121 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~--a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ 121 (319)
+..++|+..|--.... ---.|.+.+ ++++++..-............+....+++.+.+..+ .-..+.+++++++++
T Consensus 44 G~~ylD~~~g~~~~~l-Gh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SGsE 121 (443)
T PRK08297 44 GRRYLDMFTFFASSAL-GMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGGAL 121 (443)
T ss_pred CCEeeecccCHhhhcC-CCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCchHH
Confidence 5567777655321111 133567777 888777542110000000112233334444433221 113468999999999
Q ss_pred HHHHHHHHhcC--------C------CCEEEEcCCCCcchHHHHhh-CCCeEE---EEec-------cCCCCC-----c-
Q 020968 122 AIEVILTVLAR--------P------GANILLPRPGFPYYEARATH-SHLEVR---HFDL-------LPAKGW-----E- 170 (319)
Q Consensus 122 ai~~~~~~l~~--------~------gd~Vl~~~p~~~~~~~~~~~-~g~~~~---~~~~-------~~~~~~-----~- 170 (319)
|+..+++.... . ..+|+....+|++....+.. .+.... ..+. .+.-.+ .
T Consensus 122 Ave~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (443)
T PRK08297 122 AVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDL 201 (443)
T ss_pred HHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCccccc
Confidence 99999886521 1 25799888888775433332 221100 0000 000000 0
Q ss_pred --C------CHHHHHhhhc---cCceEEEEcCCCCcccc-ccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCC
Q 020968 171 --V------DLDAVEALAD---ENTVALVIINPGNPCGN-VYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN 232 (319)
Q Consensus 171 --~------d~~~l~~~l~---~~~~~v~l~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~ 232 (319)
. +++.+++.+. +++.++++.-.....|. +.+...++++.++|+++|+++|.||++.+|...|
T Consensus 202 ~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG 275 (443)
T PRK08297 202 EEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTG 275 (443)
T ss_pred chhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccc
Confidence 0 2344555554 34455555544444464 5778889999999999999999999999875554
No 376
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.53 E-value=1.2e-05 Score=75.48 Aligned_cols=187 Identities=17% Similarity=0.143 Sum_probs=103.3
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHH--HHHHHHhhcCCCCCCCC-CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAV--DAIVHSVRSARFNCYSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~--~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~ 119 (319)
++..++||..|--...-. --.|.+. +++.+++.......... ....+.+ ..+++.+.+..+ .-..+.+++++++
T Consensus 36 dG~~ylD~~~g~~~~~lG-h~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~-~~~~~~v~f~~sG 112 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALG-MNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAM-ARFVDTFARVLG-DPALPHLFFIEGG 112 (431)
T ss_pred CCCChhhcccChhhcCCC-CCChhhhHHHHHHHHHHHhhhcccccCCCCCHHH-HHHHHHHHHhcC-CCCcCEEEEeCCc
Confidence 356677776653221111 2346676 78877766432111111 1122333 333333332211 1134689999999
Q ss_pred HHHHHHHHHHhcC--------C------CCEEEEcCCCCcchHHHHh-hCCCe-EE--EEec-------cC-------CC
Q 020968 120 TQAIEVILTVLAR--------P------GANILLPRPGFPYYEARAT-HSHLE-VR--HFDL-------LP-------AK 167 (319)
Q Consensus 120 t~ai~~~~~~l~~--------~------gd~Vl~~~p~~~~~~~~~~-~~g~~-~~--~~~~-------~~-------~~ 167 (319)
++|+..+++.... . +.+|+....+|++....+. ..|.. .. ..+. .+ ..
T Consensus 113 sEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 192 (431)
T TIGR03251 113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAP 192 (431)
T ss_pred HHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccc
Confidence 9999999886531 1 3679988888877533222 22211 00 0010 00 00
Q ss_pred CCc-------CCHHHHHhhhc---cCceEEEEcCCCCccccc-cCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCC
Q 020968 168 GWE-------VDLDAVEALAD---ENTVALVIINPGNPCGNV-YTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN 232 (319)
Q Consensus 168 ~~~-------~d~~~l~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~ 232 (319)
... -+++.+++.+. +++.++++.-.....|.+ .+++.+++|.++|+++|+++|+||++.++...|
T Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG 268 (431)
T TIGR03251 193 NLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTG 268 (431)
T ss_pred ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccc
Confidence 000 12344444553 355666666555556754 677889999999999999999999999876554
No 377
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.41 E-value=1e-05 Score=76.17 Aligned_cols=210 Identities=15% Similarity=0.114 Sum_probs=114.8
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHH-hhcCC--CCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHH
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHS-VRSAR--FNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCT 120 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~-~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t 120 (319)
+..++|+..|-....- =.-.|.+.++++++ ..... ...|.. ....++.+.+++.+.+... -+.+.++++++++
T Consensus 57 G~~ylD~~sg~~~~~l-Gh~~p~i~~Ai~~q~~~~~l~~~~~~~~-~~~~~la~~l~~~l~~~~p--~~~~~v~f~~SGs 132 (464)
T TIGR00699 57 GNRLLDLYSQISSIPI-GYNNPALLKAAQSPEMATTLINRPALGN-FPSKDWAKILKEGILKVAP--KGQDQVWTGMSGS 132 (464)
T ss_pred CCEEEEccCCHhhhcC-CCCCHHHHHHHHHHHHHHhhcccccCCc-HHHHHHHHHHHHhHHhhCC--CCcCEEEEeCCcH
Confidence 5667888777422111 14568888988874 22211 111221 1122344444332222221 1346899999999
Q ss_pred HHHHHHHHHhcC--------------------------CC---CEEEEcCCCCcchHHHHh-hCCCe-----------EE
Q 020968 121 QAIEVILTVLAR--------------------------PG---ANILLPRPGFPYYEARAT-HSHLE-----------VR 159 (319)
Q Consensus 121 ~ai~~~~~~l~~--------------------------~g---d~Vl~~~p~~~~~~~~~~-~~g~~-----------~~ 159 (319)
+|+..+++.... +| .+|+....+|++....+. ..+.. ..
T Consensus 133 EAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~ 212 (464)
T TIGR00699 133 DANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWP 212 (464)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCce
Confidence 999999886521 11 269988888877533322 22211 11
Q ss_pred EEeccCCC-CC-----------cCCHHHHHhhhcc---CceEEEEcCCCCcccccc-CHHHHHHHHHHHHHcCCEEEEeC
Q 020968 160 HFDLLPAK-GW-----------EVDLDAVEALADE---NTVALVIINPGNPCGNVY-TYQHLQKIAETAKKLGIMVIADE 223 (319)
Q Consensus 160 ~~~~~~~~-~~-----------~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~D~ 223 (319)
.++..... .+ .-+++.+++.+.. +..+|++.......|.+. +.+-++++.++|+++|+++|+||
T Consensus 213 ~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DE 292 (464)
T TIGR00699 213 QAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDE 292 (464)
T ss_pred ecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEee
Confidence 11111000 00 0134556666642 455666555555567765 67779999999999999999999
Q ss_pred CCCCccCCCCCCCCCcccCC--CCCeEEEecCccccCCCc
Q 020968 224 VYDHLAFGNTPFVPMGVFGS--IVPVLTLGSISKRWIVPG 261 (319)
Q Consensus 224 a~~~~~~~~~~~~~~~~~~~--~~~vi~~~s~sK~~~~~G 261 (319)
++.++...|..+ ....++- ... | -+++|.++..|
T Consensus 293 V~tGfGrtG~~f-a~e~~gv~~~PD-i--~t~gK~lg~gG 328 (464)
T TIGR00699 293 VQTGVGATGKFW-AHEHWNLDDPPD-M--VTFSKKFQTAG 328 (464)
T ss_pred eeeCCCCCcchh-HHHhcCCCCCCC-E--EEehhhhccCC
Confidence 998875544321 1111211 122 3 35799964444
No 378
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.27 E-value=2e-05 Score=68.75 Aligned_cols=213 Identities=18% Similarity=0.179 Sum_probs=124.0
Q ss_pred CCcHHHHHHHHHHhhcCCCC---CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc------C
Q 020968 62 RTASVAVDAIVHSVRSARFN---CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA------R 132 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~------~ 132 (319)
...|.++++++++.+.-... -|.. -..++.+.+++++ ..+.++-++.+.+|...++.... +
T Consensus 75 hchpki~~aLqeq~~kLtlssrafYnd--~~~~f~~~vt~lf--------~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K 144 (427)
T KOG1402|consen 75 HCHPKIIKALQEQADKLTLSSRAFYND--VLGEFAEYVTKLF--------GYDKVLPMNTGAEAVETACKLARKWGYRKK 144 (427)
T ss_pred CCCHHHHHHHHHHHhHhhhhhHHHhhh--hHHHHHHHHHHhc--------CcceeeecccchhHHHHHHHHHHHHHHhhc
Confidence 45688899998887642221 1221 2334555555554 56778888888999888876553 1
Q ss_pred --C-C-CEEEEcCCCCcchHHHH----------hhCCC----eEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC-C
Q 020968 133 --P-G-ANILLPRPGFPYYEARA----------THSHL----EVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP-G 193 (319)
Q Consensus 133 --~-g-d~Vl~~~p~~~~~~~~~----------~~~g~----~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p-~ 193 (319)
| . .+|+.....|.+--..+ +..|- .+..++. -|.++++.++++...+.++.-| +
T Consensus 145 ~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eale~~l~~~~vaaFivEPIQ 217 (427)
T KOG1402|consen 145 NIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEALEVALKSPNVAAFIVEPIQ 217 (427)
T ss_pred cCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHHHHHhcCCCeeEEEeeccc
Confidence 2 2 24444444443211001 11110 0111111 1789999999876555556656 7
Q ss_pred CccccccCH-HHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCC
Q 020968 194 NPCGNVYTY-QHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDP 272 (319)
Q Consensus 194 nptG~~~~~-~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~ 272 (319)
-..|++.|. .-+++..++|.+||+++|.||++.++..+|+-.. ..+..-.+.+++ +.|.++..=..++.+++.+
T Consensus 218 GEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la--~d~env~PDivi--lgKalSGG~~Pvsavl~~~- 292 (427)
T KOG1402|consen 218 GEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLA--CDYENVRPDIVI--LGKALSGGVYPVSAVLADD- 292 (427)
T ss_pred cccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEE--eehhhcCCCeEE--EeccccCCeeeeEEEEecH-
Confidence 788876654 4599999999999999999999999887764211 011111112333 6788776667788888743
Q ss_pred CCCccchHHHHHHHHhh-hhcCCcchHHHHHH
Q 020968 273 NGILQDSGIVDSIKSFL-NISSDPATFIQFLK 303 (319)
Q Consensus 273 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~ 303 (319)
+++..++.-. ..+.+.+++...+.
T Consensus 293 -------~im~~~~pgeHgsTyggNpLg~~va 317 (427)
T KOG1402|consen 293 -------DIMLNIKPGEHGSTYGGNPLGCAVA 317 (427)
T ss_pred -------HHHhccCCCccccccCCChHHHHHH
Confidence 3555444332 22344556655443
No 379
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.24 E-value=4e-05 Score=70.72 Aligned_cols=189 Identities=22% Similarity=0.344 Sum_probs=97.5
Q ss_pred EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCC-----cCC----HHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSST-----VGI----LPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~-----~g~----~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
--++.|..+ ...|+.+.+.+... ...+..|.|. .|. -++...++++. .++-.+.=+-.|
T Consensus 68 ~fiG~G~y~----~~~P~~i~~~i~~~--~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLT------GmdvaNaSlyd~ 135 (429)
T PF02347_consen 68 SFIGAGSYT----HYVPAVIDRNILSR--PEFYTAYTPYQPEISQGRLQALFEYQSMICELT------GMDVANASLYDG 135 (429)
T ss_dssp S---CTTT---------HHHHH-HHCC--HHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHH------TSSEE-SEBSSC
T ss_pred ccccccccC----ceeChhhcCccccC--hhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhh------CCCccCCCCCCh
Confidence 345666655 34555555423322 1123355552 232 34455555555 233334455667
Q ss_pred HHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHH----hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968 119 CTQAIEVILTVL---ARPGANILLPRPGFPYYEARA----THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191 (319)
Q Consensus 119 ~t~ai~~~~~~l---~~~gd~Vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~ 191 (319)
++.+-.+++.+. .+++++|+++...|+.+..++ ...|++++.++.+... ..| ++++.+|++.+
T Consensus 136 atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~--~~d--------~~~~a~v~vq~ 205 (429)
T PF02347_consen 136 ATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDG--TTD--------DDDTAAVMVQN 205 (429)
T ss_dssp CHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTC--SB---------STTEEEEEEES
T ss_pred hHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccC--Ccc--------ccCeEEEEeec
Confidence 776666665554 234569999999998887744 4578888888875432 233 56788999999
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceeeEE
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWL 267 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i 267 (319)
||+ .|.+ +++++|.++++++|.++++ .+- .+....- .+...+. -.|++++ +|.||.| |-..|++
T Consensus 206 Pn~-~G~~---ed~~~i~~~~h~~gal~~~-~ad-~~aL~~l--~~Pge~G---ADI~vg~-~Q~fg~p~~~GGP~~G~~ 273 (429)
T PF02347_consen 206 PNT-FGVF---EDIKEIADIAHAAGALVIV-GAD-PNALGGL--KSPGEYG---ADIVVGE-HQTFGIPMGFGGPGAGFF 273 (429)
T ss_dssp S-T-TSB-----THHHHHHHHHHTT-EEEE-CGG-CCGCCTC----GGGGT----SEEEEC-CTTTT---CCC-S--EEE
T ss_pred CCC-CceE---eeHHHHHHHHHHcCCEEEE-ecC-HHHHhCc--CChhhcC---ccEEeeC-CCCCcccCCCCCCCeeeE
Confidence 985 6888 6699999999999999886 322 2222221 1122232 2377776 8887775 6667887
Q ss_pred Eee
Q 020968 268 VTS 270 (319)
Q Consensus 268 ~~~ 270 (319)
.+.
T Consensus 274 a~~ 276 (429)
T PF02347_consen 274 AVR 276 (429)
T ss_dssp EE-
T ss_pred EEh
Confidence 763
No 380
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.20 E-value=2.5e-05 Score=68.93 Aligned_cols=137 Identities=18% Similarity=0.186 Sum_probs=103.1
Q ss_pred CCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCC-----CCEEEEcCCCC-cchHHHHhhCC
Q 020968 82 CYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARP-----GANILLPRPGF-PYYEARATHSH 155 (319)
Q Consensus 82 ~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~-----gd~Vl~~~p~~-~~~~~~~~~~g 155 (319)
.|+.+.++-.|+.++.+.+ .-+.++.|.-+..|-+.....++++ |.+.++++..| .......+..|
T Consensus 74 AYagsrs~~~L~~avkdif--------Gfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng 145 (471)
T COG3033 74 AYAGSRSYYALADAVKDIF--------GFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING 145 (471)
T ss_pred hhcccccHHHHHHHHHHhc--------CceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence 5888888899999999988 3467888888888887777777654 55555565555 44566677788
Q ss_pred CeEEEEeccCCCC--------CcCCHHHHHhhhcc----CceEEEEcCCC-CccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968 156 LEVRHFDLLPAKG--------WEVDLDAVEALADE----NTVALVIINPG-NPCGNVYTYQHLQKIAETAKKLGIMVIAD 222 (319)
Q Consensus 156 ~~~~~~~~~~~~~--------~~~d~~~l~~~l~~----~~~~v~l~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~D 222 (319)
..+.-++++...+ ..+|++.|++++++ +...|+++..+ .-.|+..|.+.++++.++|++|++.++.|
T Consensus 146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D 225 (471)
T COG3033 146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD 225 (471)
T ss_pred CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence 8777766553222 35799999998864 45566666554 46789999999999999999999999999
Q ss_pred CCCC
Q 020968 223 EVYD 226 (319)
Q Consensus 223 ~a~~ 226 (319)
.+-.
T Consensus 226 a~Rf 229 (471)
T COG3033 226 AARF 229 (471)
T ss_pred hhhh
Confidence 8744
No 381
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.20 E-value=6.5e-05 Score=67.72 Aligned_cols=197 Identities=11% Similarity=0.051 Sum_probs=118.1
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc-------CCC---
Q 020968 65 SVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA-------RPG--- 134 (319)
Q Consensus 65 ~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~-------~~g--- 134 (319)
.-..+.+........+ -|.-.+...-..+.+-....+..|+....+.|+--.|+...++...-+-- ..|
T Consensus 116 ~Lag~wlT~t~Ntn~~-TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~ 194 (510)
T KOG0629|consen 116 GLAGEWLTSTANTNMF-TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFA 194 (510)
T ss_pred HHHHHHHHhccCCCCc-eEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhc
Confidence 3444445544444333 46655555445555555555556666666777766666666665543321 112
Q ss_pred --CEEEE-cCCCCcchHHHHhhCCCe---EEEEeccCCCCCcCCHHHHHhhhcc---C---ceEEEEcCCCCccccccCH
Q 020968 135 --ANILL-PRPGFPYYEARATHSHLE---VRHFDLLPAKGWEVDLDAVEALADE---N---TVALVIINPGNPCGNVYTY 202 (319)
Q Consensus 135 --d~Vl~-~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~---~---~~~v~l~~p~nptG~~~~~ 202 (319)
+-|+. .+-+|.+..+.+..+|+. ++.|+.+ ....+++++||+.+.+ + +-.|..+......|..
T Consensus 195 ~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~--e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF--- 269 (510)
T KOG0629|consen 195 LPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTD--ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF--- 269 (510)
T ss_pred CCcEEEEecccchhhHHHHHHHhccCCceeEEeccc--ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---
Confidence 34443 446677788999999964 5555554 4457999999997642 2 2333344446778888
Q ss_pred HHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEee
Q 020968 203 QHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTS 270 (319)
Q Consensus 203 ~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~ 270 (319)
+++..|+++|++|++|+.+|.||++ +........-+......+ -+.-+.+|.. ...+.++..+..
T Consensus 270 DdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~--SvtwnpHK~~-gaplqCsa~l~r 335 (510)
T KOG0629|consen 270 DDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERAN--SVTWNPHKLM-GAPLQCSAFLTR 335 (510)
T ss_pred CcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccC--ceeecHHHhh-cCcchhhHHHHH
Confidence 7899999999999999999999998 322221111222222211 2334678884 555666665543
No 382
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.14 E-value=0.00022 Score=71.95 Aligned_cols=147 Identities=13% Similarity=0.190 Sum_probs=98.2
Q ss_pred eccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968 49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (319)
Q Consensus 49 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~-----g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~ 119 (319)
-++.|..+ ...|+.+.+.+.+. ...+..|.|.. | +-++.+.++++. +++..+.-+..++
T Consensus 68 fig~G~y~----~~~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~a 135 (939)
T TIGR00461 68 YIGMGYYG----TILPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEG 135 (939)
T ss_pred cCCCCcCC----CcCChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchh
Confidence 44566543 35667777566542 22234565532 2 224455555555 4566677888888
Q ss_pred HHHHHHHHHHhc---CCCCEEEEcCCCCcchHHHHh----hCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968 120 TQAIEVILTVLA---RPGANILLPRPGFPYYEARAT----HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (319)
Q Consensus 120 t~ai~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 192 (319)
|++.++++++.. +++++|++++..|+.+..+++ ..|++++.++ +++++..+ ++..+++.+|
T Consensus 136 tA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~--~~~~v~~q~P 203 (939)
T TIGR00461 136 TAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV--DVFGCLLQYP 203 (939)
T ss_pred hHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC--CEEEEEEECC
Confidence 888887777642 234899999999988765544 7788777653 34565554 4567777787
Q ss_pred CCccccccCHHHHHHHHHHHHHcCCEEEEeC
Q 020968 193 GNPCGNVYTYQHLQKIAETAKKLGIMVIADE 223 (319)
Q Consensus 193 ~nptG~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (319)
+ -.|.+ +++++|+++++++|.+++++.
T Consensus 204 n-~~G~i---ed~~~i~~~~h~~gal~~~~a 230 (939)
T TIGR00461 204 A-TDGSI---LDYKQLIDALHSHKSLVSVAA 230 (939)
T ss_pred C-CCeEE---ecHHHHHHHHHHcCCEEEEEe
Confidence 6 47888 579999999999999999855
No 383
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=97.93 E-value=0.00087 Score=61.26 Aligned_cols=140 Identities=13% Similarity=0.169 Sum_probs=95.1
Q ss_pred CCcCCHHHHHHHHHHHhhhCCCCC-------CCCcEEEeCCHHHHHHHHHHHh-------cCCC-----------C-EEE
Q 020968 85 STVGILPARRAIADYLNRDLPYKL-------SPDDVYLTLGCTQAIEVILTVL-------ARPG-----------A-NIL 138 (319)
Q Consensus 85 ~~~g~~~lr~~ia~~~~~~~g~~~-------~~~~i~~~~G~t~ai~~~~~~l-------~~~g-----------d-~Vl 138 (319)
..+...||+.-+.+|+.+..+.+- ..--=++-..++++...++.+- .+.+ + .+.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 345678999999999987554321 1112234444455554444332 1122 1 455
Q ss_pred EcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccC-----ceEEEEcCC--CCccccccCHHHHHHHHHH
Q 020968 139 LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN-----TVALVIINP--GNPCGNVYTYQHLQKIAET 211 (319)
Q Consensus 139 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~v~l~~p--~nptG~~~~~~~l~~i~~~ 211 (319)
+.+-.+.+..+.+...|+++..++.+. +|+++.+.|++++.++ +..+++.+- .+.++. +++.++..+
T Consensus 187 ~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~----D~l~elg~V 260 (511)
T KOG0628|consen 187 CSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAF----DELEELGPV 260 (511)
T ss_pred ecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCcccccc----ccHHHhcch
Confidence 678889999999999999998888754 8999999999998652 233333333 223322 689999999
Q ss_pred HHHcCCEEEEeCCCCCccC
Q 020968 212 AKKLGIMVIADEVYDHLAF 230 (319)
Q Consensus 212 ~~~~~~~li~D~a~~~~~~ 230 (319)
|+++++|+.+|.+|++-.+
T Consensus 261 c~~~glWLHVDAAYAGsa~ 279 (511)
T KOG0628|consen 261 CREEGLWLHVDAAYAGSAF 279 (511)
T ss_pred hhhcCEEEEeehhhccccc
Confidence 9999999999999996543
No 384
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.85 E-value=0.00014 Score=65.69 Aligned_cols=183 Identities=14% Similarity=0.106 Sum_probs=105.8
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEeCCHHH-HHHHHHHHhc--CCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC
Q 020968 92 ARRAIADYLNRDLPYKLSPDDVYLTLGCTQ-AIEVILTVLA--RPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG 168 (319)
Q Consensus 92 lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~-ai~~~~~~l~--~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 168 (319)
|...++.-+-+..|.. +-...++++.+|. .+.+++.++. ..++.|+.+.-.+......+...|++++.++.....+
T Consensus 57 ltn~l~~d~~~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d 135 (389)
T PF05889_consen 57 LTNSLVLDALRLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGD 135 (389)
T ss_dssp HHHHHHHHHHHHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETT
T ss_pred HHHHHHHHHHHHcCCc-cccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCC
Confidence 3443333333445543 2356777776653 3455555554 5678999998888777788899999999998643333
Q ss_pred -CcCCHHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCC
Q 020968 169 -WEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSI 244 (319)
Q Consensus 169 -~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~ 244 (319)
...|.+.+++.++ +...+.++++++--.+... +++++|+++|+++|++.++..||+--... -...+..-...
T Consensus 136 ~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~--~~~~i~~a~~~ 211 (389)
T PF05889_consen 136 ELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSK--CMHLIQQAWRV 211 (389)
T ss_dssp EEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HH--HHHHHHHHHHH
T ss_pred eeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHH--HHHHHHHHHhc
Confidence 3447778887764 3556777887754445541 45999999999999999999999861100 00000000000
Q ss_pred CC-eEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHH
Q 020968 245 VP-VLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKS 287 (319)
Q Consensus 245 ~~-vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~ 287 (319)
++ .+++.|+-|.|..| ..-+.+.+++ +..+..+..
T Consensus 212 GRvda~vqS~dkNF~VP-vGgai~As~~-------~~~i~~vs~ 247 (389)
T PF05889_consen 212 GRVDAFVQSTDKNFMVP-VGGAIMASFD-------PSGILAVSK 247 (389)
T ss_dssp STCSEEEEEHHHHHCEE-SSHEEEEESS-------HHHHHHHHH
T ss_pred CCcceeeeecCCCEEec-CCCcEEEecC-------HHHHHHHHH
Confidence 11 28899999999665 2234455544 346665554
No 385
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.60 E-value=0.0078 Score=54.83 Aligned_cols=189 Identities=21% Similarity=0.297 Sum_probs=113.5
Q ss_pred eccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCH
Q 020968 49 PLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLGC 119 (319)
Q Consensus 49 ~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~-----g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~ 119 (319)
-++.|..+ .-.|+.+.+.+.+. ...+..|.|.. | +-++...++++. .++-.+.=+-.++
T Consensus 79 fiG~GyY~----~~~P~vI~rnile~--pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT------Gm~VANASm~Dea 146 (450)
T COG0403 79 FIGAGYYD----TYTPPVILRNILEN--PEWYTAYTPYQPEISQGRLEALFEFQTLVADLT------GLDVANASMLDEA 146 (450)
T ss_pred hccCcccC----CcCcHHHHHHhhcC--ccccccCCCCchhhhhHHHHHHHHHHHHHHHHh------CCCcccchhhhhH
Confidence 45666654 34566666455432 23344666532 1 123333444444 3344455556677
Q ss_pred HHHHHHHHHHhc---CCCCEEEEcCCCCcchHHHHh----hCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCC
Q 020968 120 TQAIEVILTVLA---RPGANILLPRPGFPYYEARAT----HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINP 192 (319)
Q Consensus 120 t~ai~~~~~~l~---~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 192 (319)
|.+-++++.+.. ++..+++++..+|+.+..+.+ -.|.+++..+.+ |.+.++..-...+..+++..|
T Consensus 147 TAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~~~~~gv~vQyP 219 (450)
T COG0403 147 TAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADDGDVFGVLVQYP 219 (450)
T ss_pred HHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhccccCeEEEEEecC
Confidence 777776666542 346899999999998877765 344555555542 677777772236688888888
Q ss_pred CCccc-cccCHHHHHHHHHHHHHcCCEEEEeC--CCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC----cceee
Q 020968 193 GNPCG-NVYTYQHLQKIAETAKKLGIMVIADE--VYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLG 265 (319)
Q Consensus 193 ~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~--a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G 265 (319)
+ -.| .. .+++++.+.+++++.++++=. .--.+ +......+-.|++++.... |+| |-.+|
T Consensus 220 ~-~~G~~~---~d~~~l~~~~h~~~al~~v~aDplaL~L---------L~pPGe~GADIvvG~~Qrf-GvPmgfGGPhag 285 (450)
T COG0403 220 N-TFGIVE---EDLRALIEAAHSAGALVIVAADPLALGL---------LKPPGEFGADIVVGSAQRF-GVPMGFGGPHAG 285 (450)
T ss_pred C-CCCccc---hhHHHHHHHHhhcCCEEEEEechhHhhc---------cCCccccCCceEEecCccc-CCCcCCCCccee
Confidence 8 456 44 679999999999998777532 11111 1111222334888876665 554 67788
Q ss_pred EEEee
Q 020968 266 WLVTS 270 (319)
Q Consensus 266 ~i~~~ 270 (319)
|+.+.
T Consensus 286 ~fA~~ 290 (450)
T COG0403 286 YFAVK 290 (450)
T ss_pred eeeEh
Confidence 88764
No 386
>PLN02672 methionine S-methyltransferase
Probab=97.58 E-value=0.0038 Score=64.23 Aligned_cols=256 Identities=12% Similarity=0.105 Sum_probs=154.7
Q ss_pred cccHHHHHHHHHHHhhhcCCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhC
Q 020968 25 GITVRGVLNSLLENLNKNDTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDL 104 (319)
Q Consensus 25 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~ 104 (319)
|.+++.|++.+..-. +.-.+-++|+..|-..- ..-. .....+...+.+..+..|.++.|...+|..||.|+...+
T Consensus 369 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (1082)
T PLN02672 369 PNQVKTIFKFLKNGF--HEVSGSLDLSFEDESVA--DEKI-PFLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYH 443 (1082)
T ss_pred chHHHHHHHHHHccc--hhhhhhccccccccccc--hhhc-cHHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhc
Confidence 345666665443111 12234566765542210 0111 134556666777777899999999999999999999999
Q ss_pred CCCCCCCcEEEeCCHHHHHHHHHHHhc------CCCCEEEEcCCCCcchHHHHhhCC--------CeEEEEeccCCCCCc
Q 020968 105 PYKLSPDDVYLTLGCTQAIEVILTVLA------RPGANILLPRPGFPYYEARATHSH--------LEVRHFDLLPAKGWE 170 (319)
Q Consensus 105 g~~~~~~~i~~~~G~t~ai~~~~~~l~------~~gd~Vl~~~p~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~ 170 (319)
++++.+++|++.++-..|+..+++.+. +.+.+-.. ...|...+...| -.+..+....
T Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 514 (1082)
T PLN02672 444 HIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWL----PKKWLTSLAIENATSDSKSDDVITVIEAPR----- 514 (1082)
T ss_pred CCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccC----CHHHHhHhhhhcccccCccCCeEEEEeCCC-----
Confidence 999999999999999999988887653 33321111 112222222222 2222222211
Q ss_pred CCHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCC-CccCCCCCCCCCcccC---CCC
Q 020968 171 VDLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD-HLAFGNTPFVPMGVFG---SIV 245 (319)
Q Consensus 171 ~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~---~~~ 245 (319)
..+.+.++++. +++.|+..--. +-..+-..++.+.+.+++.|.+++.|..-. +++........+..+. ...
T Consensus 515 -~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (1082)
T PLN02672 515 -QSDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPS 590 (1082)
T ss_pred -cchHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCc
Confidence 11234444443 45555544333 222333668999999999999999998643 4432221111121111 123
Q ss_pred CeEEEecCccccCCCcceeeEEEeeCCCCCccchHHHHHHHHhhhh-cCCcchHHHHHHHH
Q 020968 246 PVLTLGSISKRWIVPGWRLGWLVTSDPNGILQDSGIVDSIKSFLNI-SSDPATFIQFLKSS 305 (319)
Q Consensus 246 ~vi~~~s~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~ 305 (319)
+..++-++-|.--.+.+.+.+++..++ .+.+.+.+.... ....+.++|....-
T Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (1082)
T PLN02672 591 HAAIICGLVKNQVYSDLEVAFVISENE-------AVLKALSKTGEVLEGRTAIISQFYYGC 644 (1082)
T ss_pred chhHhhhhhhccccccceEEEEecCcH-------HHHHHHHHHHHhhccchHHHHHHHHHH
Confidence 457777899997789999999997553 477777777764 55678888877554
No 387
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.49 E-value=0.0018 Score=57.62 Aligned_cols=193 Identities=15% Similarity=0.138 Sum_probs=108.3
Q ss_pred CCcHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCC--cE-EEeCCHHHHHHHHHHHhcC
Q 020968 62 RTASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPD--DV-YLTLGCTQAIEVILTVLAR 132 (319)
Q Consensus 62 ~~~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~--~i-~~~~G~t~ai~~~~~~l~~ 132 (319)
....++.+|+-..+.....-+ |+..+.+++++..-.++--+.++ ++++ .| +=.-+++.|+.++..++++
T Consensus 51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~--ldp~kWGVNVQp~SGSPANfavYtall~ 128 (477)
T KOG2467|consen 51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFG--LDPEKWGVNVQPYSGSPANFAVYTALLK 128 (477)
T ss_pred chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhC--CCHHHCceeeccCCCCchhhHHHhhhcC
Confidence 455677777766665432222 33333334444333333222232 3443 11 1123557788889999999
Q ss_pred CCCEEEE---cCCCCcchHHHHh--hCCCeEE-----EEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCccccccC
Q 020968 133 PGANILL---PRPGFPYYEARAT--HSHLEVR-----HFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGNVYT 201 (319)
Q Consensus 133 ~gd~Vl~---~~p~~~~~~~~~~--~~g~~~~-----~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~ 201 (319)
|+++|.- |+-.|-.+..... ...+.-+ ++.+++. ..-+|.+.||+.... ++++++-.....+ ..+
T Consensus 129 Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~-TG~IDYD~Le~~A~~frPk~iiaG~SaY~--R~~- 204 (477)
T KOG2467|consen 129 PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPS-TGYIDYDKLEKTATLFRPKLIIAGTSAYS--RLI- 204 (477)
T ss_pred CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCC-CCceehHHHHHHHHhcCCcEEEeccccch--hhc-
Confidence 9999974 3444433222221 1111111 2333333 347899999986543 5566553332222 232
Q ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCC-ccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEe
Q 020968 202 YQHLQKIAETAKKLGIMVIADEVYDH-LAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVT 269 (319)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~ 269 (319)
+..++.++|.+.|++++.|.++.. ++-.+..+.|+ .+.+ |+..+.+|+ +.|-|-|-|..
T Consensus 205 --DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPF-ey~D----iVTTTTHKs--LRGPRg~mIFy 264 (477)
T KOG2467|consen 205 --DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPF-EYCD----IVTTTTHKS--LRGPRGAMIFY 264 (477)
T ss_pred --cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcc-cccc----eeecccccc--ccCCcceeEEE
Confidence 367777788888999999999874 44444433333 2222 888899999 67888887755
No 388
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.08 E-value=0.038 Score=56.07 Aligned_cols=144 Identities=16% Similarity=0.212 Sum_probs=85.4
Q ss_pred EeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCc-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 48 IPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTV-----G----ILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 48 i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~-----g----~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
.-++.|..+ .-.|+.+.+.+.+. ...+..|.|.. | +-++...++++. .++-.+.=+-.+
T Consensus 82 ~fiG~G~y~----~~~P~vi~~~i~~~--~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt------Gm~vaNASl~D~ 149 (954)
T PRK12566 82 SLIGMGYHG----TVTPTVILRNVLEN--PGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT------GLDLANASLLDE 149 (954)
T ss_pred ccccccccC----CcCcHHHHHHHHhC--chhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh------Cchhhhhhhccc
Confidence 456666644 34555564555432 22244565532 2 223444444444 233334444556
Q ss_pred HHHHHHHHHHHh---cCCCCEEEEcCCCCcchHHHHh----hCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968 119 CTQAIEVILTVL---ARPGANILLPRPGFPYYEARAT----HSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191 (319)
Q Consensus 119 ~t~ai~~~~~~l---~~~gd~Vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~ 191 (319)
+|.+-++++.+. .++..+|+++...|+.+..+++ ..|++++. +++++.++++...+++.+
T Consensus 150 atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~~~~v~vq~ 216 (954)
T PRK12566 150 ATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHAVFGALLQY 216 (954)
T ss_pred hhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCCEEEEEEEC
Confidence 665555444333 2235789999999988776554 44555542 234445555677888889
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
|+ -.|.+ +++++|.+++++.|.+++
T Consensus 217 P~-~~G~i---~d~~~i~~~~h~~gal~~ 241 (954)
T PRK12566 217 PD-THGEI---RDLRPLIDQLHGQQALAC 241 (954)
T ss_pred CC-CceEE---ccHHHHHHHHHHcCCEEE
Confidence 87 46888 679999999999998866
No 389
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=96.73 E-value=0.049 Score=48.81 Aligned_cols=209 Identities=11% Similarity=0.046 Sum_probs=109.4
Q ss_pred CCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCC-----CCC-CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC
Q 020968 45 RPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNC-----YSS-TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG 118 (319)
Q Consensus 45 ~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-----Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G 118 (319)
+.+.||+.|-. ..|+++++.+++-+......+ -++ ..-...+.+...+.+.+.++++-+.+=+++-.|
T Consensus 4 ~~~~nFsaGPa------~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGG 77 (365)
T COG1932 4 PRVYNFSAGPA------ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGG 77 (365)
T ss_pred CCCCCCCCCcc------cCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCc
Confidence 56788998863 456777666665544321111 111 111233344444444555565655555566667
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCcch-HHHHhhCCCeEEEEecc-CCCC--CcCCHHHHHhhhccCceEEEEcCCCC
Q 020968 119 CTQAIEVILTVLARPGANILLPRPGFPYY-EARATHSHLEVRHFDLL-PAKG--WEVDLDAVEALADENTVALVIINPGN 194 (319)
Q Consensus 119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~-~~~~--~~~d~~~l~~~l~~~~~~v~l~~p~n 194 (319)
+|.....+...|...+.+-.+..-.|... ...++..+-.+...... ...+ ..++++..+ +.++..-|.+|.-..
T Consensus 78 at~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeT 155 (365)
T COG1932 78 ATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNET 155 (365)
T ss_pred cHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCc
Confidence 89999999999876543313334444332 24455555322211111 1222 233433332 233322355555455
Q ss_pred ccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeEEEeeCCCC
Q 020968 195 PCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGWLVTSDPNG 274 (319)
Q Consensus 195 ptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~i~~~~~~~ 274 (319)
-+|+.++. ...+ . .+.++++|.+-.-+.. +..+..+ -++-.|.-|.+|..| ++.++..
T Consensus 156 i~Gv~v~~--~p~~---~--~~~~~v~D~SS~ilsr----~iDvsk~-----dviyagaQKnlGpaG--ltvvIvr---- 213 (365)
T COG1932 156 ISGVEVPE--LPDI---G--SDGLLVADASSAILSR----PIDVSKY-----DVIYAGAQKNLGPAG--LTVVIVR---- 213 (365)
T ss_pred ccceEccC--CCCC---C--CCceEEEecccHHhcC----CCChhHc-----ceEEEehhhccCccc--eEEEEEc----
Confidence 67887551 1111 1 1278999997776542 2222222 277779999998888 6766663
Q ss_pred CccchHHHHHHHH
Q 020968 275 ILQDSGIVDSIKS 287 (319)
Q Consensus 275 ~~~~~~~~~~~~~ 287 (319)
++++.+++.
T Consensus 214 ----~~~l~r~~~ 222 (365)
T COG1932 214 ----PDLLERAES 222 (365)
T ss_pred ----HHHHhcccc
Confidence 246666544
No 390
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=96.34 E-value=0.041 Score=47.98 Aligned_cols=232 Identities=11% Similarity=0.086 Sum_probs=123.1
Q ss_pred CcHHHHHHHHHHhhcCCC-CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhc---CCCCEEE
Q 020968 63 TASVAVDAIVHSVRSARF-NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLA---RPGANIL 138 (319)
Q Consensus 63 ~~~~~~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~---~~gd~Vl 138 (319)
..|.+.+|...++..... .++ -..+|.+....+.... -.-+-+++++++++|..++++... +.-|.|
T Consensus 62 chp~VV~A~~kQmat~~tN~RF----lhd~lv~cA~~l~stl----PeLsvc~F~NSGSEANDLALRLAR~ftkhqDvI- 132 (452)
T KOG1403|consen 62 CHPEVVRAGAKQMATISTNNRF----LHDELVQCARTLTSTL----PELSVCFFVNSGSEANDLALRLARNFTKHQDVI- 132 (452)
T ss_pred CCHHHHHHHHHHHhHhcccchh----hHHHHHHHHHHHhhcC----CCceEEEEecCCchhhHHHHHHHHhhcccCceE-
Confidence 457777777766654221 122 2345555555554331 123467899999999999987653 333544
Q ss_pred EcCCCCcchHHHHhh-------CC--C-eEEEEeccC--C---CCCcC------C-----HHHHHhhh----ccCc--eE
Q 020968 139 LPRPGFPYYEARATH-------SH--L-EVRHFDLLP--A---KGWEV------D-----LDAVEALA----DENT--VA 186 (319)
Q Consensus 139 ~~~p~~~~~~~~~~~-------~g--~-~~~~~~~~~--~---~~~~~------d-----~~~l~~~l----~~~~--~~ 186 (319)
+-+..|.++...... .| . +..++.+.+ + +.+.. | -+.+++.+ ..+. .+
T Consensus 133 tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAA 212 (452)
T KOG1403|consen 133 TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAA 212 (452)
T ss_pred EEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHH
Confidence 444444433221110 01 0 111111111 0 00110 1 12233332 2221 12
Q ss_pred EEEcCCCCccccccCHHH-HHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceee
Q 020968 187 LVIINPGNPCGNVYTYQH-LQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLG 265 (319)
Q Consensus 187 v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G 265 (319)
.+-.+-..=.|.++|+.. .+++++..+..|.+.|.||..-+|..-|..+..++.++--+. |-++.|. ...|..++
T Consensus 213 fiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPD---IVtmgKp-mGNGhPVa 288 (452)
T KOG1403|consen 213 FIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPD---IVTMGKP-MGNGHPVA 288 (452)
T ss_pred HHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccc---hheeccc-CCCCCeee
Confidence 222233444566665554 788889999999999999999998766666655555442122 2356788 57899999
Q ss_pred EEEeeCCCCCccchHHHHHHHHh-hhh--cCCcchHHHHHHHHHH--hccccccc
Q 020968 266 WLVTSDPNGILQDSGIVDSIKSF-LNI--SSDPATFIQFLKSSRK--LKRNSFLK 315 (319)
Q Consensus 266 ~i~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~q~~~~~~l--~~~~~~~~ 315 (319)
.++.-. ++.+.+..- ... +.+.++++..+...++ ++++.+++
T Consensus 289 ~Vattk--------eIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ 335 (452)
T KOG1403|consen 289 AVATTK--------EIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQE 335 (452)
T ss_pred EEeccH--------HHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHH
Confidence 998742 456655541 111 3455666665544433 45555443
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.20 E-value=0.1 Score=50.20 Aligned_cols=168 Identities=18% Similarity=0.167 Sum_probs=106.7
Q ss_pred CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCC-HHHHHHH---HHHHhc-CCC----CEEEEcCCCCcchHHHHhhCCC
Q 020968 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLG-CTQAIEV---ILTVLA-RPG----ANILLPRPGFPYYEARATHSHL 156 (319)
Q Consensus 86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G-~t~ai~~---~~~~l~-~~g----d~Vl~~~p~~~~~~~~~~~~g~ 156 (319)
..|+.++-+.+.+.+-... ..|++.+-++ +.++-++ ++++.. ..| ..-++|...|......+...|.
T Consensus 577 aqGY~~lf~~Le~~Lc~iT----G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm 652 (1001)
T KOG2040|consen 577 AQGYQQLFTELEKDLCEIT----GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM 652 (1001)
T ss_pred HhhHHHHHHHHHHHhheee----cccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence 3677777777777775533 3566766533 2233222 334432 233 3456788888878888999999
Q ss_pred eEEEEeccCCCCCcCCHHHHHhhhcc---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCC
Q 020968 157 EVRHFDLLPAKGWEVDLDAVEALADE---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNT 233 (319)
Q Consensus 157 ~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~ 233 (319)
+++++.++.. ..+|..+|++..++ +-.++.++.|+. .|+. . +.+.+++++.+++|.-+..|.+-..-.
T Consensus 653 kvvpV~~~~~--G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf-E-~~i~d~cd~iHehGGQVYlDGANMNAq---- 723 (1001)
T KOG2040|consen 653 KVVPVGCDAN--GNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF-E-EGIDDICDIIHEHGGQVYLDGANMNAQ---- 723 (1001)
T ss_pred EEEEeeccCC--CCccHHHHHHHHHHhhhhhheeEEecccc-cccc-c-ccHHHHHHHHHhcCCEEEecCCCccce----
Confidence 9999998654 45999999887654 346777888863 3443 1 569999999999999999999776422
Q ss_pred CCCCCcccCCCCCeEEEecCccccCCC----cceeeEEE
Q 020968 234 PFVPMGVFGSIVPVLTLGSISKRWIVP----GWRLGWLV 268 (319)
Q Consensus 234 ~~~~~~~~~~~~~vi~~~s~sK~~~~~----G~r~G~i~ 268 (319)
+-+.+..+.+..++=-.++|+|.+| |-.+|=|.
T Consensus 724 --VGlc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIg 760 (1001)
T KOG2040|consen 724 --VGLCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIG 760 (1001)
T ss_pred --ecccCCccccccceeecccceeeecCCCCCCCCCccc
Confidence 1122222222224444677887665 44455443
No 392
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=95.12 E-value=0.71 Score=40.67 Aligned_cols=206 Identities=13% Similarity=0.097 Sum_probs=125.3
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcC-CCCCCCCC-------cCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSA-RFNCYSST-------VGILPARRAIADYLNRDLPYKLSPDDVYL 115 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~Y~~~-------~g~~~lr~~ia~~~~~~~g~~~~~~~i~~ 115 (319)
+.++|.|..+.-. -.|......+...++.- .-.-|+.. .+.+..-..++... +...++|.+
T Consensus 65 d~~~iYlcGNSLG-----LmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~Evav 133 (465)
T KOG3846|consen 65 DKPVIYLCGNSLG-----LMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAV 133 (465)
T ss_pred CCCeEEEeccccc-----cCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhhh
Confidence 4567777776644 23455555555554431 01122222 23344555555555 347889999
Q ss_pred eCCHHHHHHHHHHHhcCCC---CEEEEcCCCCcc----hHHHHhhCCCeEE--EEeccC-CCCCcCCHHHHHhhhcc---
Q 020968 116 TLGCTQAIEVILTVLARPG---ANILLPRPGFPY----YEARATHSHLEVR--HFDLLP-AKGWEVDLDAVEALADE--- 182 (319)
Q Consensus 116 ~~G~t~ai~~~~~~l~~~g---d~Vl~~~p~~~~----~~~~~~~~g~~~~--~~~~~~-~~~~~~d~~~l~~~l~~--- 182 (319)
.++.|..++.++.++.+|- -+|+.+.-.|++ ....++..|+.+. .+-+.+ ++.-.+..+++.+.+..
T Consensus 134 mNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngD 213 (465)
T KOG3846|consen 134 MNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGD 213 (465)
T ss_pred HhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCC
Confidence 9999999999999987653 578888766654 4566777787532 222323 22335667777777653
Q ss_pred CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcc
Q 020968 183 NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGW 262 (319)
Q Consensus 183 ~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~ 262 (319)
...+|+++..+.-||+.++ +.+|-..-+..|.++=.|-++.- +.-+..+..++- .+.+...-|......-
T Consensus 214 eiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv----gNVpL~LHdWgV---DFACWCSYKYlnaGaG 283 (465)
T KOG3846|consen 214 EIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV----GNVPLQLHDWGV---DFACWCSYKYLNAGAG 283 (465)
T ss_pred eEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh----cCCceEEeecCC---ceEEEeeecccccCCC
Confidence 4566777788999999987 77777555667899989998875 222333333333 3566666676544322
Q ss_pred eeeEEEee
Q 020968 263 RLGWLVTS 270 (319)
Q Consensus 263 r~G~i~~~ 270 (319)
.+|-+.+.
T Consensus 284 gIgGlFvH 291 (465)
T KOG3846|consen 284 GIGGLFVH 291 (465)
T ss_pred ccceeeee
Confidence 34444433
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=94.42 E-value=0.35 Score=43.32 Aligned_cols=87 Identities=26% Similarity=0.309 Sum_probs=54.4
Q ss_pred CHHHHHhhhcc-----CceEEEEcCC-CCccc-cccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCC-CCcccCC
Q 020968 172 DLDAVEALADE-----NTVALVIINP-GNPCG-NVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFV-PMGVFGS 243 (319)
Q Consensus 172 d~~~l~~~l~~-----~~~~v~l~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~ 243 (319)
.++++|+++.. .+.+.++.-| ....| ...|+.-.+++.+++++|++.+|+||++-+..-+|.-.. .-..+..
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 35666666632 3555555555 55555 567888899999999999999999999987544442110 0111122
Q ss_pred CCCeEEEecCccccCCCc
Q 020968 244 IVPVLTLGSISKRWIVPG 261 (319)
Q Consensus 244 ~~~vi~~~s~sK~~~~~G 261 (319)
...++ +|||-|-.+|
T Consensus 334 PpD~v---TFSKK~q~gG 348 (484)
T KOG1405|consen 334 PPDVV---TFSKKFQTGG 348 (484)
T ss_pred Cccce---ehhhhhhcCc
Confidence 22233 7899974443
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=89.49 E-value=5 Score=34.73 Aligned_cols=136 Identities=21% Similarity=0.213 Sum_probs=75.5
Q ss_pred HHHHHHHHhc--CCCCE-EEEcCCCCcchHHHHhhCCCeEEEEeccCCC-CCcCCHHHHHhhhcc-Cc-eEEEEcCCCCc
Q 020968 122 AIEVILTVLA--RPGAN-ILLPRPGFPYYEARATHSHLEVRHFDLLPAK-GWEVDLDAVEALADE-NT-VALVIINPGNP 195 (319)
Q Consensus 122 ai~~~~~~l~--~~gd~-Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~l~~-~~-~~v~l~~p~np 195 (319)
.+.+++.++. +|..+ |+-..-.-.+..+..-..|.+.+.+....+. ...-|++.++..+.+ +. +++++.+.. .
T Consensus 88 slslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~stt-s 166 (432)
T KOG3843|consen 88 SLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTT-S 166 (432)
T ss_pred cHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecc-c
Confidence 3555555553 34333 3333333333445556678888777654332 344477887777654 22 233332221 1
Q ss_pred cccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCC-eEEEecCccccCCC
Q 020968 196 CGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVP-VLTLGSISKRWIVP 260 (319)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~-vi~~~s~sK~~~~~ 260 (319)
.=..-+++.+++|..+|..|+++=|+..+|+--.-. ...-+..-..-++ ..++.|+.|.|.+|
T Consensus 167 cfapr~pd~leaiaaica~~diphivnnayglqsee--~i~~iaa~~~~grida~vqsldknf~vp 230 (432)
T KOG3843|consen 167 CFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEE--CIHKIAAAAECGRIDAFVQSLDKNFMVP 230 (432)
T ss_pred ccCCCCCchHHHHHHHHHccCchhhhccccccchHH--HHHHHHHHhhhccHHHHHHHhhhcceee
Confidence 112223477999999999999999999999863210 0001111111112 26678999999887
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=88.32 E-value=17 Score=31.96 Aligned_cols=195 Identities=11% Similarity=0.030 Sum_probs=104.0
Q ss_pred CCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCC--------CCCCCC--cCCHHHHHHHHHHHhhhCCCCCCCCcE
Q 020968 44 TRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARF--------NCYSST--VGILPARRAIADYLNRDLPYKLSPDDV 113 (319)
Q Consensus 44 ~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~--------~~Y~~~--~g~~~lr~~ia~~~~~~~g~~~~~~~i 113 (319)
...++||+.|-. .+|..++..+++.+-.... .+.+.+ .-+.+.+..+.+++ +++-+.+-+
T Consensus 5 ~~~vvnFaaGPA------klp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLl----niPdn~~vl 74 (370)
T KOG2790|consen 5 PERVVNFAAGPA------KLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELL----NIPDNYKVL 74 (370)
T ss_pred ccceeecCCCcc------cCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHH----cCCCceeEE
Confidence 568999999963 4566666666554433110 111111 11233444455555 334444455
Q ss_pred EEeCCHHHHHHHHHHHhc--CCC---CEEEEcCCCCcchHHHHhhCCCe-EEEEeccCCC-CCcCCHHHHHhhhccCceE
Q 020968 114 YLTLGCTQAIEVILTVLA--RPG---ANILLPRPGFPYYEARATHSHLE-VRHFDLLPAK-GWEVDLDAVEALADENTVA 186 (319)
Q Consensus 114 ~~~~G~t~ai~~~~~~l~--~~g---d~Vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~ 186 (319)
++-.|+|..+.++...++ +.| |-|++-.++-..+... +.+|.. .+..+..... +-.+|.+.++. +++.+-
T Consensus 75 f~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EA-kk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~y 151 (370)
T KOG2790|consen 75 FLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEA-KKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASY 151 (370)
T ss_pred EEeCCCcccccccchhhhccccCCccceEEeccccHHHHHHH-HhhCCceEEeccccccccCcCCChhhccc--CCCccE
Confidence 777888888888877776 444 5566655555555444 344443 3333332111 11245554443 233446
Q ss_pred EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCCcceeeE
Q 020968 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVPGWRLGW 266 (319)
Q Consensus 187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~G~r~G~ 266 (319)
+++|.--...|+-++.-. +-..++.+++.|-+.-.+. .+..+.. .-+++.+.-|..|.+|+.+=.
T Consensus 152 vyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSnflS----rpvDvsk-----~gvi~aGAQKN~G~aG~Tvvi 216 (370)
T KOG2790|consen 152 VYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSNFLS----RPVDVSK-----FGVIFAGAQKNVGPAGVTVVI 216 (370)
T ss_pred EEEecCceeeceecCCCC------CCCCCCceEEEecccchhc----CCccchh-----cceEEeccccccCccccEEEE
Confidence 666654445577654222 2234578888988665543 1222222 237788899998888865433
No 396
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=87.97 E-value=8.6 Score=32.40 Aligned_cols=99 Identities=15% Similarity=0.265 Sum_probs=64.7
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCEE--------------EEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHH
Q 020968 112 DVYLTLGCTQAIEVILTVLARPGANI--------------LLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVE 177 (319)
Q Consensus 112 ~i~~~~G~t~ai~~~~~~l~~~gd~V--------------l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 177 (319)
-+.+-+|+-.+..++..++ +.|..| ....|........++.+|+.+......-. ..-..+++.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence 4677888888877766665 344322 22222223345677889999887776431 223566777
Q ss_pred hhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 178 ALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 178 ~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
+++.. +...|+ +|.+++.-++..+-++|++.|+.++
T Consensus 80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 66653 223443 6999999999999999999998753
No 397
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=83.73 E-value=13 Score=31.12 Aligned_cols=95 Identities=18% Similarity=0.213 Sum_probs=56.3
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (319)
Q Consensus 108 ~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 187 (319)
+....+++..||..|...+ +.|++.|..|.+.+|....-.......| ++..+.- . +..+.++ +..+
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~dl~-----~~~l- 72 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADILE-----GAFL- 72 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHHhC-----CcEE-
Confidence 4566899999998887755 5566788888888877654332233333 3333332 1 2222221 2334
Q ss_pred EEcCCCCccccccCHHHHHHHHHHHHHcCCEEE-EeC
Q 020968 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI-ADE 223 (319)
Q Consensus 188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li-~D~ 223 (319)
++..++++ +.-..+...|++.++++- .|+
T Consensus 73 Vi~at~d~-------~ln~~i~~~a~~~~ilvn~~d~ 102 (205)
T TIGR01470 73 VIAATDDE-------ELNRRVAHAARARGVPVNVVDD 102 (205)
T ss_pred EEECCCCH-------HHHHHHHHHHHHcCCEEEECCC
Confidence 44555554 335788999999998873 444
No 398
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=83.42 E-value=12 Score=31.54 Aligned_cols=91 Identities=16% Similarity=0.165 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhcCCCCEEE-EcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccc
Q 020968 119 CTQAIEVILTVLARPGANIL-LPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG 197 (319)
Q Consensus 119 ~t~ai~~~~~~l~~~gd~Vl-~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG 197 (319)
|..|-. ++++|.+.+-+|. +..+.-......++..|++++..+.+ |.+.|.++++. ...|+++.+.....
T Consensus 8 G~~G~~-v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~g-~d~v~~~~~~~~~~ 78 (233)
T PF05368_consen 8 GNQGRS-VVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALKG-VDAVFSVTPPSHPS 78 (233)
T ss_dssp SHHHHH-HHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHTT-CSEEEEESSCSCCC
T ss_pred cHHHHH-HHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHcC-CceEEeecCcchhh
Confidence 444433 4445555664443 45555333345567789987755542 88899998884 44555555533222
Q ss_pred cccCHHHHHHHHHHHHHcCCEEEE
Q 020968 198 NVYTYQHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 198 ~~~~~~~l~~i~~~~~~~~~~li~ 221 (319)
.. +.-..+++.|++.|+-.++
T Consensus 79 ~~---~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 79 EL---EQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HH---HHHHHHHHHHHHHT-SEEE
T ss_pred hh---hhhhhHHHhhhccccceEE
Confidence 22 5568888999988876554
No 399
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=79.23 E-value=4.9 Score=36.40 Aligned_cols=69 Identities=22% Similarity=0.342 Sum_probs=47.9
Q ss_pred HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
.......++.+..+.+.++.+|.+......++-..... .....+.|-.||.+++++|++.|++++|-||
T Consensus 24 id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~----~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 24 IDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGS----TEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HHHHHHhCCcEEEEEeecCCcceeeecCcccccccccc----cccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 45556778888888887777777765554443221111 1223456778999999999999999999888
No 400
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=78.97 E-value=23 Score=30.95 Aligned_cols=96 Identities=14% Similarity=0.216 Sum_probs=59.6
Q ss_pred HHHHHHHHhcCCC-CEEEEcCCCCcc---hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccc
Q 020968 122 AIEVILTVLARPG-ANILLPRPGFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG 197 (319)
Q Consensus 122 ai~~~~~~l~~~g-d~Vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG 197 (319)
++...+..+.+.| |.|++++-.+.. +...++..|+..+.+-... -..+.+++..+.....|++.+-...||
T Consensus 107 G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~Pt-----T~~eri~~i~~~a~gFIY~vS~~GvTG 181 (263)
T CHL00200 107 GINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIAPT-----SSKSRIQKIARAAPGCIYLVSTTGVTG 181 (263)
T ss_pred CHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEECCC-----CCHHHHHHHHHhCCCcEEEEcCCCCCC
Confidence 5566666666666 888888865543 4567788888776554321 245666666655444666655556778
Q ss_pred cc--cCHHHHHHHHHHHHHc-CCEEEEeC
Q 020968 198 NV--YTYQHLQKIAETAKKL-GIMVIADE 223 (319)
Q Consensus 198 ~~--~~~~~l~~i~~~~~~~-~~~li~D~ 223 (319)
.. ++ +++.++++..+++ +.++.++-
T Consensus 182 ~~~~~~-~~~~~~i~~ir~~t~~Pi~vGF 209 (263)
T CHL00200 182 LKTELD-KKLKKLIETIKKMTNKPIILGF 209 (263)
T ss_pred CCcccc-HHHHHHHHHHHHhcCCCEEEEC
Confidence 73 22 5577777777664 66666643
No 401
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=78.51 E-value=56 Score=32.37 Aligned_cols=77 Identities=12% Similarity=0.243 Sum_probs=47.2
Q ss_pred CCCCEEEEcCCCCcchHHHHhh--CCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHH
Q 020968 132 RPGANILLPRPGFPYYEARATH--SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIA 209 (319)
Q Consensus 132 ~~gd~Vl~~~p~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~ 209 (319)
.++.+.++...+|+....+++. .+..+. +.. .|+.+.... .++...+++..|.. -|.+. +..+++
T Consensus 203 ~krkk~vvd~~~hpqtlsV~~TRa~~~~i~-v~~-------~~~~~~~~s-~~~v~gvlvQYP~t-~G~i~---d~~el~ 269 (1001)
T KOG2040|consen 203 NKRKKFVVDSNCHPQTLSVVKTRAKGFGIK-VVV-------SDIKEADYS-SKDVSGVLVQYPDT-EGSVL---DFDELV 269 (1001)
T ss_pred cccceEEecCCCCcchhhhhhcccccccee-EEe-------cCHHHhhcc-ccceeEEEEEcCCC-CCccc---CHHHHH
Confidence 4667899999999988777652 222222 111 132222221 23456677777764 46674 488889
Q ss_pred HHHHHcCCEEEE
Q 020968 210 ETAKKLGIMVIA 221 (319)
Q Consensus 210 ~~~~~~~~~li~ 221 (319)
+.+++.+.++++
T Consensus 270 ~~a~~~~s~vv~ 281 (1001)
T KOG2040|consen 270 ELAHANGSLVVM 281 (1001)
T ss_pred HHhhccCceEEE
Confidence 999988877664
No 402
>PRK10595 SOS cell division inhibitor; Provisional
Probab=78.36 E-value=33 Score=27.55 Aligned_cols=103 Identities=15% Similarity=0.057 Sum_probs=62.1
Q ss_pred cEEEe---CCHHH-HHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968 112 DVYLT---LGCTQ-AIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (319)
Q Consensus 112 ~i~~~---~G~t~-ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 187 (319)
++++. +|-.+ .+.=++..+...+..|+.-.|.+..+.......|+....+=.....+-.-.+..+|++++.+...+
T Consensus 30 Ell~~~~qpg~~e~LLlP~L~~l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~a 109 (164)
T PRK10595 30 ELVYREDQPMMTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSV 109 (164)
T ss_pred EEeecCCCchHHHHHHHHHHHHHhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcE
Confidence 45553 44444 222233334456778888888888888999999987544332211111124577788898887777
Q ss_pred EEcCCCCccccccCHHHHHHHHHHHHHcCCE
Q 020968 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIM 218 (319)
Q Consensus 188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 218 (319)
+++-..+ .++.++++++--.|.+-+.+
T Consensus 110 VL~Wlp~----~l~~~~~RRLQlAAe~g~~l 136 (164)
T PRK10595 110 VLGWLPD----ELTEEEHARLVDAAQEGNAM 136 (164)
T ss_pred EEECCcc----cCCHHHHHHHHHHHHhCCCE
Confidence 7775321 23446788887777665554
No 403
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=77.90 E-value=14 Score=33.30 Aligned_cols=102 Identities=23% Similarity=0.243 Sum_probs=71.6
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEc-CCCCcc-----hHHHHhhCCCeEEEEeccCCCCCcCCH-----HHHHhhhccCce
Q 020968 117 LGCTQAIEVILTVLARPGANILLP-RPGFPY-----YEARATHSHLEVRHFDLLPAKGWEVDL-----DAVEALADENTV 185 (319)
Q Consensus 117 ~G~t~ai~~~~~~l~~~gd~Vl~~-~p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~-----~~l~~~l~~~~~ 185 (319)
.|=|--|..+++.+.+.|-+|++. .-+|-. ...+++..|.+++.-. .+-|+ +.++.+...+..
T Consensus 150 ~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~------~G~DpAaVafDAi~~Akar~~D 223 (340)
T COG0552 150 VGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGK------EGADPAAVAFDAIQAAKARGID 223 (340)
T ss_pred CchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccC------CCCCcHHHHHHHHHHHHHcCCC
Confidence 345778888888888899777765 355532 3455677788776432 12354 556666666777
Q ss_pred EEEEcCC---CCccccccCHHHHHHHHHHHHHcC------CEEEEeCCCCC
Q 020968 186 ALVIINP---GNPCGNVYTYQHLQKIAETAKKLG------IMVIADEVYDH 227 (319)
Q Consensus 186 ~v~l~~p---~nptG~~~~~~~l~~i~~~~~~~~------~~li~D~a~~~ 227 (319)
.+++... ||-+... +++++|.+++++.. ++++.|..-+.
T Consensus 224 vvliDTAGRLhnk~nLM---~EL~KI~rV~~k~~~~ap~e~llvlDAttGq 271 (340)
T COG0552 224 VVLIDTAGRLHNKKNLM---DELKKIVRVIKKDDPDAPHEILLVLDATTGQ 271 (340)
T ss_pred EEEEeCcccccCchhHH---HHHHHHHHHhccccCCCCceEEEEEEcccCh
Confidence 8877766 7777777 89999999998865 67777987765
No 404
>PLN02591 tryptophan synthase
Probab=77.26 E-value=36 Score=29.52 Aligned_cols=158 Identities=13% Similarity=0.168 Sum_probs=91.9
Q ss_pred CCCCeEeccCCCCCCCCCCCCcHHHHHHHHHHhhcCCCCCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeC-CH--
Q 020968 43 DTRPLIPLGHGDPSAFPSFRTASVAVDAIVHSVRSARFNCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTL-GC-- 119 (319)
Q Consensus 43 ~~~~~i~l~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~-G~-- 119 (319)
.+-++|.++..-.+.. --=|-++++-.+++..+. .....-+.+.+.- +.. +..=++++- +-
T Consensus 28 ~Gad~iElGiPfSDP~---aDGpvIq~a~~rAL~~G~--------~~~~~~~~~~~~r-~~~----~~p~ilm~Y~N~i~ 91 (250)
T PLN02591 28 CGADVIELGVPYSDPL---ADGPVIQAAATRALEKGT--------TLDSVISMLKEVA-PQL----SCPIVLFTYYNPIL 91 (250)
T ss_pred CCCCEEEECCCCCCCc---ccCHHHHHHHHHHHHcCC--------CHHHHHHHHHHHh-cCC----CCCEEEEecccHHH
Confidence 4789999998833311 122677777777776532 1223333333332 111 111133332 21
Q ss_pred HHHHHHHHHHhcCCC-CEEEEcCCCCcc---hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc
Q 020968 120 TQAIEVILTVLARPG-ANILLPRPGFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (319)
Q Consensus 120 t~ai~~~~~~l~~~g-d~Vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 195 (319)
..++..++..+.+.| |.|++++-.+.. +...++..|+..+.+-... .+.+.+++........|++..-...
T Consensus 92 ~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~Pt-----t~~~ri~~ia~~~~gFIY~Vs~~Gv 166 (250)
T PLN02591 92 KRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTTPT-----TPTERMKAIAEASEGFVYLVSSTGV 166 (250)
T ss_pred HhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCC-----CCHHHHHHHHHhCCCcEEEeeCCCC
Confidence 336777777776666 899999977743 5667788898877654321 2455666666555566776665667
Q ss_pred cccccC-HHHHHHHHHHHHHc-CCEEEE
Q 020968 196 CGNVYT-YQHLQKIAETAKKL-GIMVIA 221 (319)
Q Consensus 196 tG~~~~-~~~l~~i~~~~~~~-~~~li~ 221 (319)
||..-. ..+++++++.++++ ++++++
T Consensus 167 TG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 167 TGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred cCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 776322 36678877777764 666655
No 405
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=76.93 E-value=44 Score=30.40 Aligned_cols=125 Identities=11% Similarity=0.066 Sum_probs=66.7
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEE--EcCCCCc------chHHHHhhCCCeEEE
Q 020968 89 ILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANIL--LPRPGFP------YYEARATHSHLEVRH 160 (319)
Q Consensus 89 ~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl--~~~p~~~------~~~~~~~~~g~~~~~ 160 (319)
..+|++.+.++-... + . ..+=++..+||-.+..++......-|..++ ..++.+. ....+++.+|+....
T Consensus 42 ~~~l~~l~~~~k~~~-~-~-~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~ 118 (343)
T TIGR03573 42 EKELEELVDKIKKKG-G-G-RYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHT 118 (343)
T ss_pred HHHHHHHHHHHHhcC-C-C-CCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 345555555443221 1 1 155567788887777665333222344333 4455553 245566778888876
Q ss_pred EeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccC
Q 020968 161 FDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAF 230 (319)
Q Consensus 161 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~ 230 (319)
+.+ |++.+.+....... +..+|.... .......+.++|+++|+.+|+.....+-.+
T Consensus 119 i~~--------d~~~~~~l~~~~~~-----~~~~pc~~c-~~~~~~~l~~~A~~~gi~~Il~G~~~dE~f 174 (343)
T TIGR03573 119 ITI--------NPETFRKLQRAYFK-----KVGDPEWPQ-DHAIFASVYQVALKFNIPLIIWGENIAEEY 174 (343)
T ss_pred EeC--------CHHHHHHHHHHHHh-----ccCCCchhh-hhHHHHHHHHHHHHhCCCEEEeCCCHHHhc
Confidence 664 44444443322111 222332221 113367788899999998887765555333
No 406
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=76.40 E-value=37 Score=32.15 Aligned_cols=131 Identities=18% Similarity=0.216 Sum_probs=78.5
Q ss_pred CcCCHHHHHHHHHHHhhhCCC-----------CCCCCcEEEeCCHHHHHHHHHHHhcCCC--CEEEEc--CCCCcc--hH
Q 020968 86 TVGILPARRAIADYLNRDLPY-----------KLSPDDVYLTLGCTQAIEVILTVLARPG--ANILLP--RPGFPY--YE 148 (319)
Q Consensus 86 ~~g~~~lr~~ia~~~~~~~g~-----------~~~~~~i~~~~G~t~ai~~~~~~l~~~g--d~Vl~~--~p~~~~--~~ 148 (319)
.++-++|.+.|-+|+...... .+..-++++|-|.+..++.++..-.+.| =+|++. .|.+.+ +.
T Consensus 324 ~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~l 403 (556)
T KOG1467|consen 324 SEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLL 403 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHH
Confidence 344567777777776542211 3445578888888777777665544333 334433 366655 34
Q ss_pred HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEE-eCCCC
Q 020968 149 ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA-DEVYD 226 (319)
Q Consensus 149 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~-D~a~~ 226 (319)
..+...|+.+.++-+.. ++. .+.+-++.++=++.---.|.+|+..--..++=.++++|+++|+ =|+|-
T Consensus 404 r~Lv~~GinctYv~I~a-----~sy-----im~evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~yK 472 (556)
T KOG1467|consen 404 RRLVDRGINCTYVLINA-----ASY-----IMLEVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYK 472 (556)
T ss_pred HHHHHcCCCeEEEEehh-----HHH-----HHHhcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechhh
Confidence 56667888888777632 111 1112334443334434558899877778888888999998774 45554
No 407
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=75.96 E-value=6.8 Score=34.98 Aligned_cols=68 Identities=29% Similarity=0.489 Sum_probs=46.4
Q ss_pred HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
.......++++..+.+.+..+|.+......++-..... .++ .+.|-.||.+++++|++.|+++|+-||
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 44556778888888887777777765544443222111 111 244568999999999999999999887
No 408
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=75.28 E-value=60 Score=28.86 Aligned_cols=174 Identities=18% Similarity=0.160 Sum_probs=91.8
Q ss_pred CCCCCCCcCCHHHHHHHHHHHhh----hCCC----------CCCCCcEEEeCCHHHHHHHHHHHhcCCCC--EEEEcC--
Q 020968 80 FNCYSSTVGILPARRAIADYLNR----DLPY----------KLSPDDVYLTLGCTQAIEVILTVLARPGA--NILLPR-- 141 (319)
Q Consensus 80 ~~~Y~~~~g~~~lr~~ia~~~~~----~~g~----------~~~~~~i~~~~G~t~ai~~~~~~l~~~gd--~Vl~~~-- 141 (319)
...|....+...+|+.+-+-+++ ..|. .+-.++|++|.|.+.-...++..-.++|. .|++.+
T Consensus 118 ~~~~~S~~~~~~lr~~~i~~I~eli~Eie~~~E~Ia~Qa~ehihsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~ 197 (353)
T KOG1465|consen 118 TNKKLSSADAKKLRKDLIEGIKELITEIEGSRENIAVQAIEHIHSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGA 197 (353)
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHhccCceEEecCccHHHHHHHHHHHhccCceEEEEeecC
Confidence 34455554555566655544433 1111 12346899999988888888877666653 444543
Q ss_pred CCCcchHHHH--hhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEE
Q 020968 142 PGFPYYEARA--THSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV 219 (319)
Q Consensus 142 p~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 219 (319)
|.+.++.... ...|++...++ | ..+-..+..-.+.|+-++.--+.|-+....-...++..|++|-+++
T Consensus 198 p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~MsrVnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv 267 (353)
T KOG1465|consen 198 PNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMSRVNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPV 267 (353)
T ss_pred CcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhhhcceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcE
Confidence 5555433222 25566654443 2 2344444443455554454444444444455677788888898888
Q ss_pred EEeCCCCCccCCCCCCCCCcccCCCCCeEEEecCccccCCC-cceeeEEEeeC
Q 020968 220 IADEVYDHLAFGNTPFVPMGVFGSIVPVLTLGSISKRWIVP-GWRLGWLVTSD 271 (319)
Q Consensus 220 i~D~a~~~~~~~~~~~~~~~~~~~~~~vi~~~s~sK~~~~~-G~r~G~i~~~~ 271 (319)
++=....-+. |+...+. +....++|.++.+... |...|-+-+.+
T Consensus 268 ~VlAp~yKLs-------Plyp~~~-ds~~~f~s~~~il~~~e~~~~~~~~v~n 312 (353)
T KOG1465|consen 268 IVLAPMYKLS-------PLYPTNP-DSFHEFRSPSEILPFSEGDPAGRVDVLN 312 (353)
T ss_pred EEecchhhcC-------CCCCCCH-HHHHhcCCcccccCccccCcccceeecc
Confidence 8755443322 2222222 2234566666665443 23444443333
No 409
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=75.07 E-value=42 Score=27.06 Aligned_cols=85 Identities=13% Similarity=0.037 Sum_probs=54.6
Q ss_pred HhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC-CCCccccccCHHHHHH
Q 020968 129 VLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN-PGNPCGNVYTYQHLQK 207 (319)
Q Consensus 129 ~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~-p~nptG~~~~~~~l~~ 207 (319)
.+...+..|+...|-+..+.......|+....+=......-.-.+...|++++.+.+.++++- |+. ++.+++++
T Consensus 55 ~Ls~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~WLp~~-----l~~~~lRR 129 (168)
T TIGR00623 55 QLGQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGWLTDE-----LTEEEHAK 129 (168)
T ss_pred HhcccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEecCCcc-----CCHHHHHH
Confidence 344566777777777778888889999975443221111111256788999998887777776 422 44467777
Q ss_pred HHHHHHHcCCE
Q 020968 208 IAETAKKLGIM 218 (319)
Q Consensus 208 i~~~~~~~~~~ 218 (319)
+--.+..-+.+
T Consensus 130 LqlAA~~G~al 140 (168)
T TIGR00623 130 LVRAAEEGNAM 140 (168)
T ss_pred HHHHHHhCCCe
Confidence 77666665544
No 410
>PRK08265 short chain dehydrogenase; Provisional
Probab=73.51 E-value=49 Score=28.34 Aligned_cols=66 Identities=18% Similarity=0.042 Sum_probs=36.1
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 110 PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 110 ~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
...+++|.|+...=..+++.|.+.|..|++..-.-..........+.++..+..+.. |.+.+++.+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~ 71 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDIT-----DDAAIERAV 71 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCC-----CHHHHHHHH
Confidence 345566555443333445567778988887654433334444555555666655432 555555544
No 411
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=72.81 E-value=7.4 Score=35.54 Aligned_cols=67 Identities=22% Similarity=0.343 Sum_probs=47.1
Q ss_pred HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE--EeC
Q 020968 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI--ADE 223 (319)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li--~D~ 223 (319)
......+++.+..+.+.++.+|.+....+.++.... ....|-.||.+++++|++.|++++|-|| +|-
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g---------a~~~~~~YT~~di~eiv~yA~~rgI~vIPEID~ 92 (348)
T cd06562 24 IDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG---------AYSPSEVYTPEDVKEIVEYARLRGIRVIPEIDT 92 (348)
T ss_pred HHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc---------CcCCCceECHHHHHHHHHHHHHcCCEEEEeccC
Confidence 445567778888888877777777655544432211 1234678899999999999999999888 454
No 412
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=71.67 E-value=9.4 Score=34.27 Aligned_cols=65 Identities=22% Similarity=0.364 Sum_probs=44.2
Q ss_pred HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE--EeC
Q 020968 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI--ADE 223 (319)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li--~D~ 223 (319)
......+++++..+.+.++.+|.+....+.++.... ..|-.||.+++++|++.|+++|+-|| +|-
T Consensus 24 Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g-----------~~~~~yT~~di~elv~yA~~rgI~vIPEId~ 90 (311)
T cd06570 24 LDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKA-----------SDGLYYTQEQIREVVAYARDRGIRVVPEIDV 90 (311)
T ss_pred HHHHHHhCCeEEEEEEecCCCceeecCCCccccccC-----------CCCCccCHHHHHHHHHHHHHcCCEEEEeecC
Confidence 445566778888888766666666544433321111 13557999999999999999999887 444
No 413
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=70.93 E-value=43 Score=26.78 Aligned_cols=89 Identities=21% Similarity=0.172 Sum_probs=50.9
Q ss_pred EEEeCC-HHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcC
Q 020968 113 VYLTLG-CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIIN 191 (319)
Q Consensus 113 i~~~~G-~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~ 191 (319)
|+++.+ +.-|-. +++.+.+.|-+|....-.-..... ..+++++..+. .|++.+.+++.. ...|+.+.
T Consensus 1 I~V~GatG~vG~~-l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~-------~d~~~~~~al~~-~d~vi~~~ 68 (183)
T PF13460_consen 1 ILVFGATGFVGRA-LAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDL-------FDPDSVKAALKG-ADAVIHAA 68 (183)
T ss_dssp EEEETTTSHHHHH-HHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCT-------TCHHHHHHHHTT-SSEEEECC
T ss_pred eEEECCCChHHHH-HHHHHHHCCCEEEEEecCchhccc---ccccccceeee-------hhhhhhhhhhhh-cchhhhhh
Confidence 344443 333333 455566677666654433332222 44444443332 478889988884 55665555
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCC
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGI 217 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~ 217 (319)
+.++. +....+.+++.|++.++
T Consensus 69 ~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 69 GPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp HSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhcc----ccccccccccccccccc
Confidence 43333 24668899999988876
No 414
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=70.38 E-value=33 Score=28.86 Aligned_cols=92 Identities=20% Similarity=0.343 Sum_probs=57.6
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC-cchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCce
Q 020968 107 KLSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF-PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTV 185 (319)
Q Consensus 107 ~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 185 (319)
.+....+++..||..|...+ +.|++.|..|.+..|.. +......+..++.... + .++.+.+.. ..
T Consensus 9 ~l~~k~VlvvGgG~va~rKa-~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~------~--~~~~~~~~~-----~~ 74 (210)
T COG1648 9 DLEGKKVLVVGGGSVALRKA-RLLLKAGADVTVVSPEFEPELKALIEEGKIKWIE------R--EFDAEDLDD-----AF 74 (210)
T ss_pred EcCCCEEEEECCCHHHHHHH-HHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhh------c--ccChhhhcC-----ce
Confidence 34567899999999888864 45668899999999988 3344555554422211 1 134333332 33
Q ss_pred EEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 186 ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 186 ~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
+|+... +++ +.=+++.+.|+++++++-
T Consensus 75 lviaAt-~d~-------~ln~~i~~~a~~~~i~vN 101 (210)
T COG1648 75 LVIAAT-DDE-------ELNERIAKAARERRILVN 101 (210)
T ss_pred EEEEeC-CCH-------HHHHHHHHHHHHhCCcee
Confidence 444443 333 446889999999887753
No 415
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=69.28 E-value=54 Score=29.10 Aligned_cols=98 Identities=16% Similarity=0.104 Sum_probs=52.8
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc---hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHh---hhc
Q 020968 108 LSPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEA---LAD 181 (319)
Q Consensus 108 ~~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~---~l~ 181 (319)
+..+-+++|.|+...=.+++.-+.+.|.++++-+-.-.+ +...++..| ++..+..+-. +.+++.+ .++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis-----~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS-----DREEIYRLAKKVK 109 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCC-----CHHHHHHHHHHHH
Confidence 344556666666555555556677888877665533322 334444445 4554444432 4444444 333
Q ss_pred c--CceEEEEcCCCCcc---ccccCHHHHHHHHHH
Q 020968 182 E--NTVALVIINPGNPC---GNVYTYQHLQKIAET 211 (319)
Q Consensus 182 ~--~~~~v~l~~p~npt---G~~~~~~~l~~i~~~ 211 (319)
+ +..-|+++|..=.+ ..-.+.+++++..++
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 3 34556667663222 334577888886653
No 416
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=66.21 E-value=22 Score=29.69 Aligned_cols=100 Identities=24% Similarity=0.188 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCC---CcCCHHHHHhhhccCceEEEEcCC
Q 020968 117 LGCTQAIEVILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKG---WEVDLDAVEALADENTVALVIINP 192 (319)
Q Consensus 117 ~G~t~ai~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~d~~~l~~~l~~~~~~v~l~~p 192 (319)
.|-|.+|...++.+.+.| |.|+-..-+|..-.-.....|++.++-......+ ..+|++.+.+ .+|..+++.--
T Consensus 16 VGKTy~ML~ea~~l~~~G~DVViG~vethgR~et~~l~~gLe~iP~~~i~y~g~~~~E~DldaiL~---R~P~vvLVDEL 92 (211)
T PF02702_consen 16 VGKTYAMLQEAHRLKEQGVDVVIGYVETHGRPETEALLEGLEVIPRKKIEYRGRTLEEMDLDAILA---RRPQVVLVDEL 92 (211)
T ss_dssp SSHHHHHHHHHHHHHHTT--EEEEE---TT-HHHHHHHCTS-B---EEEEETTEEEEE--HHHHHH---H--SEEEES-T
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHcCCCcCCCeeEeeCCEecccCCHHHHHh---cCCCEEEeCcc
Confidence 567889988888888888 5555444445333444556677665543322222 2467665543 46777776633
Q ss_pred --CCccccccCHHHHHHHHHHHHHcCCEEEE
Q 020968 193 --GNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 193 --~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (319)
.|+.|..-. +.++.+-++... ||-++.
T Consensus 93 AHtN~pgsr~~-kR~qDVeeLL~a-GIdV~T 121 (211)
T PF02702_consen 93 AHTNAPGSRHK-KRYQDVEELLDA-GIDVYT 121 (211)
T ss_dssp T-B--TT-SSS-BHHHHHHHHHHT-T-EEEE
T ss_pred cccCCCCCCCc-ccHHhHHHHHHC-CCeEEE
Confidence 578886543 778888888754 776653
No 417
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=65.34 E-value=64 Score=25.22 Aligned_cols=80 Identities=16% Similarity=0.174 Sum_probs=41.7
Q ss_pred CCEEEEcCCCCcchHHHHhhC-CCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHH
Q 020968 134 GANILLPRPGFPYYEARATHS-HLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212 (319)
Q Consensus 134 gd~Vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~ 212 (319)
|-+++.+. +....++.. |+.+..+ +....+ -+ ..+.+.+..+...++++.|. |.|......+...|.+.|
T Consensus 32 Gf~l~AT~----gTa~~L~~~~Gi~v~~v-i~~~~g--g~-~~i~~~I~~g~i~lVInt~d-p~~~~~~~~D~~~IRR~A 102 (142)
T PRK05234 32 QHELYATG----TTGGLIQEATGLDVTRL-LSGPLG--GD-QQIGALIAEGKIDMLIFFRD-PLTAQPHDPDVKALLRLA 102 (142)
T ss_pred CCEEEEeC----hHHHHHHhccCCeeEEE-EcCCCC--Cc-hhHHHHHHcCceeEEEEecC-CCCCCcccchHHHHHHHH
Confidence 55554433 233444555 7766655 221111 13 33555555544444445441 123322135678999999
Q ss_pred HHcCCEEEEe
Q 020968 213 KKLGIMVIAD 222 (319)
Q Consensus 213 ~~~~~~li~D 222 (319)
-+++++++..
T Consensus 103 v~~~IP~~T~ 112 (142)
T PRK05234 103 DVWNIPVATN 112 (142)
T ss_pred HHcCCCEEcC
Confidence 9999887743
No 418
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=64.15 E-value=87 Score=26.63 Aligned_cols=98 Identities=14% Similarity=0.201 Sum_probs=61.8
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEE----cC---------CCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhh
Q 020968 113 VYLTLGCTQAIEVILTVLARPGANILL----PR---------PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL 179 (319)
Q Consensus 113 i~~~~G~t~ai~~~~~~l~~~gd~Vl~----~~---------p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 179 (319)
++.-+||-.+..++..+..+ .+.+.+ +. +...-....++.+|+..+.++.... ..--.+++.++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~--~e~~~e~l~~~ 80 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT--EEDEVEELKGI 80 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC--ccHHHHHHHHH
Confidence 56678888888888777765 443332 11 1112235677899998877654322 12244556555
Q ss_pred hcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 180 ADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 180 l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
+++ +...+ -+|.+.+...+..+-++|.+.|+..+
T Consensus 81 l~~~gv~~v-------v~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 81 LHTLDVEAV-------VFGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHcCCCEE-------EECCcccHHHHHHHHHHHHhcCCEEe
Confidence 543 33333 37888898889999999999887653
No 419
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=64.01 E-value=57 Score=24.14 Aligned_cols=95 Identities=16% Similarity=0.133 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCcccc
Q 020968 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPCGN 198 (319)
Q Consensus 120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~ 198 (319)
.+.+..++..+.+.|-+|+.+.. ....++..|+++..+.-..+++ + ..+.+.+.+ +..-++++.|+ +.-.
T Consensus 11 K~~~~~~a~~l~~~G~~i~AT~g----Ta~~L~~~Gi~~~~v~~~~~~g---~-~~i~~~i~~~g~idlVIn~~~-~~~~ 81 (112)
T cd00532 11 KAMLVDLAPKLSSDGFPLFATGG----TSRVLADAGIPVRAVSKRHEDG---E-PTVDAAIAEKGKFDVVINLRD-PRRD 81 (112)
T ss_pred HHHHHHHHHHHHHCCCEEEECcH----HHHHHHHcCCceEEEEecCCCC---C-cHHHHHHhCCCCEEEEEEcCC-CCcc
Confidence 34444455555566777765543 3344566788877665432211 3 334455554 44444455553 1110
Q ss_pred ccCHHHHHHHHHHHHHcCCEEEEeC
Q 020968 199 VYTYQHLQKIAETAKKLGIMVIADE 223 (319)
Q Consensus 199 ~~~~~~l~~i~~~~~~~~~~li~D~ 223 (319)
.-...+-..|.+.|.+++++++.+-
T Consensus 82 ~~~~~dg~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 82 RCTDEDGTALLRLARLYKIPVTTPN 106 (112)
T ss_pred cccCCChHHHHHHHHHcCCCEEECH
Confidence 0112457789999999999998764
No 420
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=63.65 E-value=41 Score=29.80 Aligned_cols=86 Identities=17% Similarity=0.230 Sum_probs=55.1
Q ss_pred HHHhcCCCCEEEEcC---CCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccc----
Q 020968 127 LTVLARPGANILLPR---PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNV---- 199 (319)
Q Consensus 127 ~~~l~~~gd~Vl~~~---p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~---- 199 (319)
...|.+.|..|++|- +.+.-..+..-.+| ++.+.+.+. .|.+.|+++++.....|=+..-..+|+..
T Consensus 78 vnklak~GSQviiPyR~d~~~~r~lkvmGdLG-Qvl~~~fd~-----~DedSIr~vvk~sNVVINLIGrd~eTknf~f~D 151 (391)
T KOG2865|consen 78 VNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLG-QVLFMKFDL-----RDEDSIRAVVKHSNVVINLIGRDYETKNFSFED 151 (391)
T ss_pred HHHHhhcCCeEEEeccCCccchhheeeccccc-ceeeeccCC-----CCHHHHHHHHHhCcEEEEeeccccccCCccccc
Confidence 445667899999984 44444445555555 345555543 48899999988665555455556777642
Q ss_pred cCHHHHHHHHHHHHHcCCE
Q 020968 200 YTYQHLQKIAETAKKLGIM 218 (319)
Q Consensus 200 ~~~~~l~~i~~~~~~~~~~ 218 (319)
....--++|+++|++-|+-
T Consensus 152 vn~~~aerlAricke~GVe 170 (391)
T KOG2865|consen 152 VNVHIAERLARICKEAGVE 170 (391)
T ss_pred ccchHHHHHHHHHHhhChh
Confidence 1223358999999997753
No 421
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=62.61 E-value=1.1e+02 Score=27.18 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=62.8
Q ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCC--EEEEcC--CCCcch--HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc
Q 020968 108 LSPDDVYLTLGCTQAIEVILTVLARPGA--NILLPR--PGFPYY--EARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD 181 (319)
Q Consensus 108 ~~~~~i~~~~G~t~ai~~~~~~l~~~gd--~Vl~~~--p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 181 (319)
+...++++|.|-+.+...++....+.|. +|++.+ |.+.+. ...++..|+++..+. |. .+-..++
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~---------Ds-a~~~~~~ 186 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV---------DS-AVGAFMS 186 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe---------ch-HHHHHHH
Confidence 3567899999988888778877767775 555543 888764 456677887776654 21 1122222
Q ss_pred cCceEEEEcC-CCCccccccCHHHHHHHHHHHHHcCCEEEE
Q 020968 182 ENTVALVIIN-PGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 182 ~~~~~v~l~~-p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (319)
+...|++.. .---.|.++++.----|+-.|++.+.++++
T Consensus 187 -~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 187 -RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred -hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 233444332 122335555555556777888888887664
No 422
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=62.19 E-value=98 Score=26.28 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=60.8
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEEc--CC-----------CCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhh
Q 020968 113 VYLTLGCTQAIEVILTVLARPGANILLP--RP-----------GFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL 179 (319)
Q Consensus 113 i~~~~G~t~ai~~~~~~l~~~gd~Vl~~--~p-----------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 179 (319)
++..+||-.+..++..++.+ .+.+.+. .| ...-...+++.+|+..+.+.+... +.-..+++.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~--~e~~~~~l~~~ 80 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE--EEKEVEDLAGQ 80 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc--hhHHHHHHHHH
Confidence 45678888887777776654 4433221 11 112345678899998877765321 12234444444
Q ss_pred hcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 180 ADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 180 l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
+.+ +...++ +|.+.+......+-++|.+.|+..+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 81 LGELDVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 433 333443 7888898899999999999987653
No 423
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=61.90 E-value=13 Score=36.55 Aligned_cols=43 Identities=23% Similarity=0.319 Sum_probs=34.9
Q ss_pred EEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCccCCC
Q 020968 187 LVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLAFGN 232 (319)
Q Consensus 187 v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~ 232 (319)
+..-.|++..|.. ++++++++.|++.||-||+|-+|.+|..++
T Consensus 201 ~g~yAp~sryGtP---edfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 201 TGYYAPTSRYGTP---EDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred ceeccccccCCCH---HHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 3344556666665 999999999999999999999999987544
No 424
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=60.06 E-value=20 Score=32.85 Aligned_cols=73 Identities=27% Similarity=0.464 Sum_probs=45.5
Q ss_pred HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc-e-EEEEcCC-----CCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT-V-ALVIINP-----GNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~-~v~l~~p-----~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
...+..+++....+.+.+..+|.+....+.++-.... + .-...+| ..+.|-.||.+++++|++.|+++|+-||
T Consensus 24 Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VI 103 (357)
T cd06563 24 IDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVI 103 (357)
T ss_pred HHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEE
Confidence 3445567777777777766777776554433211100 0 0000011 2355778999999999999999999887
No 425
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=59.48 E-value=59 Score=24.76 Aligned_cols=47 Identities=15% Similarity=0.291 Sum_probs=37.1
Q ss_pred cCCHHHHHhhhccCceEEEE--cCC---CCccccccCHHHHHHHHHHHHHcC
Q 020968 170 EVDLDAVEALADENTVALVI--INP---GNPCGNVYTYQHLQKIAETAKKLG 216 (319)
Q Consensus 170 ~~d~~~l~~~l~~~~~~v~l--~~p---~nptG~~~~~~~l~~i~~~~~~~~ 216 (319)
.+|+..+.+++..+...|++ |+| +...|.....+.++.+.++..+.|
T Consensus 39 rv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 39 RVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred ccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 69999999999888777776 344 568898888888888888877654
No 426
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=59.41 E-value=61 Score=27.93 Aligned_cols=95 Identities=23% Similarity=0.228 Sum_probs=60.1
Q ss_pred CcEEEeCCHHHHHHHH-HHHhcCCCCEEEEcCCCCcchHHHHhhCC-CeEEEEeccCCCCCcCCHHHHHhhhcc------
Q 020968 111 DDVYLTLGCTQAIEVI-LTVLARPGANILLPRPGFPYYEARATHSH-LEVRHFDLLPAKGWEVDLDAVEALADE------ 182 (319)
Q Consensus 111 ~~i~~~~G~t~ai~~~-~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~l~~------ 182 (319)
..+++.+|++.+|-.+ ++.|.+.|-+|+...-.-......+...+ .++..+.++- -|.+.+++.+..
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-----tD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDV-----TDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeecc-----CCHHHHHHHHHHHHHhhC
Confidence 3677788888887665 56788899999988877777788888888 3455555442 266665555431
Q ss_pred CceEEEEcCCCCcccc---ccCHHHHHHHHHH
Q 020968 183 NTVALVIINPGNPCGN---VYTYQHLQKIAET 211 (319)
Q Consensus 183 ~~~~v~l~~p~nptG~---~~~~~~l~~i~~~ 211 (319)
+.. ++++|-.---|. -...++|+.+++.
T Consensus 81 ~iD-iLvNNAGl~~g~~~~~~~~~dw~~Mid~ 111 (246)
T COG4221 81 RID-ILVNNAGLALGDPLDEADLDDWDRMIDT 111 (246)
T ss_pred ccc-EEEecCCCCcCChhhhCCHHHHHHHHHH
Confidence 233 444555322222 3355667776664
No 427
>PRK04296 thymidine kinase; Provisional
Probab=59.20 E-value=62 Score=26.51 Aligned_cols=95 Identities=16% Similarity=0.190 Sum_probs=53.6
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcc---hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc---cCceEEEEcCCC
Q 020968 120 TQAIEVILTVLARPGANILLPRPGFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---ENTVALVIINPG 193 (319)
Q Consensus 120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~l~~p~ 193 (319)
|.++..+.+. ...|.+|++..|.+.. ....+...|..+..+.. ...+++.+.+. .+..+|++.-.+
T Consensus 17 T~~l~~~~~~-~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEaq 88 (190)
T PRK04296 17 TELLQRAYNY-EERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEAQ 88 (190)
T ss_pred HHHHHHHHHH-HHcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEccc
Confidence 5566555544 3467888877664322 23344555544332221 12233333332 255677777653
Q ss_pred CccccccCHHHHHHHHHHHHHcCCEEEEeCCCCC
Q 020968 194 NPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDH 227 (319)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~ 227 (319)
.++.+++.++.+.++..++.+|+=.--.+
T Consensus 89 -----~l~~~~v~~l~~~l~~~g~~vi~tgl~~~ 117 (190)
T PRK04296 89 -----FLDKEQVVQLAEVLDDLGIPVICYGLDTD 117 (190)
T ss_pred -----cCCHHHHHHHHHHHHHcCCeEEEEecCcc
Confidence 35667788899998888988887554444
No 428
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=59.17 E-value=22 Score=33.69 Aligned_cols=76 Identities=21% Similarity=0.339 Sum_probs=48.4
Q ss_pred HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCce--------EEEE----cCC--CCccccccCHHHHHHHHHHHH
Q 020968 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTV--------ALVI----INP--GNPCGNVYTYQHLQKIAETAK 213 (319)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~--------~v~l----~~p--~nptG~~~~~~~l~~i~~~~~ 213 (319)
.......++.+..+.+.++.+|.+.+..+.++...... -.+. ..+ ..+.+-.||.+++++|++.|+
T Consensus 28 Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~ 107 (445)
T cd06569 28 LDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAK 107 (445)
T ss_pred HHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHH
Confidence 44555677888888887777787766555443221100 0000 011 123456899999999999999
Q ss_pred HcCCEEE--EeC
Q 020968 214 KLGIMVI--ADE 223 (319)
Q Consensus 214 ~~~~~li--~D~ 223 (319)
+++|-|| +|-
T Consensus 108 ~rgI~VIPEID~ 119 (445)
T cd06569 108 ARHIEVIPEIDM 119 (445)
T ss_pred HcCCEEEEccCC
Confidence 9999888 454
No 429
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=58.22 E-value=45 Score=29.61 Aligned_cols=52 Identities=15% Similarity=0.179 Sum_probs=36.6
Q ss_pred CHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc
Q 020968 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (319)
Q Consensus 172 d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~ 229 (319)
-++.++++...+.+.+++.+-..+ .++-++|.++++++|+.++==++.+-+.
T Consensus 78 v~~~l~e~~~~gvk~avI~s~Gf~------~~~~~~l~~~a~~~girvlGPNc~Gi~~ 129 (291)
T PRK05678 78 AADAILEAIDAGIDLIVCITEGIP------VLDMLEVKAYLERKKTRLIGPNCPGIIT 129 (291)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCC------HHHHHHHHHHHHHcCCEEECCCCCcccc
Confidence 467777777778777666654432 3445689999999999998666655443
No 430
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=57.56 E-value=1.4e+02 Score=26.65 Aligned_cols=89 Identities=19% Similarity=0.209 Sum_probs=46.7
Q ss_pred CCCCcEEE-eCCHHHHHHHHHHHhcCCCCEEEEcCC-CC-cchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCc
Q 020968 108 LSPDDVYL-TLGCTQAIEVILTVLARPGANILLPRP-GF-PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENT 184 (319)
Q Consensus 108 ~~~~~i~~-~~G~t~ai~~~~~~l~~~gd~Vl~~~p-~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 184 (319)
+.+...++ .+++.-+|.+++-+-. .|-++++..| .. .......+.+|++++.++..+ +...--.+.+++...+.+
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~-g~~~~a~~~a~el~~~~p 136 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTPGAP-GNMKGAIERAKELAAEIP 136 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCC-CchHHHHHHHHHHHHhCC
Confidence 44444444 5555556666654433 4544433333 33 345688899999999888621 111112333344445444
Q ss_pred e-EEEE---cCCCCcccc
Q 020968 185 V-ALVI---INPGNPCGN 198 (319)
Q Consensus 185 ~-~v~l---~~p~nptG~ 198 (319)
. .++. .||.||-..
T Consensus 137 ~~~~~~~Qf~NpaN~~aH 154 (300)
T COG0031 137 GYAVWLNQFENPANPEAH 154 (300)
T ss_pred CceEchhhcCCCccHHHH
Confidence 4 5554 355555444
No 431
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=57.34 E-value=87 Score=29.34 Aligned_cols=90 Identities=18% Similarity=0.215 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHhcCCC-CEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc
Q 020968 118 GCTQAIEVILTVLARPG-ANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196 (319)
Q Consensus 118 G~t~ai~~~~~~l~~~g-d~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt 196 (319)
|+-+-..+++..|.+.| ..|.+.+-++......++..|.++. .++++...+.+ ...|+ +..+.|+
T Consensus 185 GAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~------------~l~el~~~l~~-~DvVi-ssTsa~~ 250 (414)
T COG0373 185 GAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV------------ALEELLEALAE-ADVVI-SSTSAPH 250 (414)
T ss_pred cccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee------------cHHHHHHhhhh-CCEEE-EecCCCc
Confidence 34444566788888888 8999999999988889999885543 44455555553 23443 3333332
Q ss_pred ccccCHHHHHHHHHHHHHcCCEEEEeCCC
Q 020968 197 GNVYTYQHLQKIAETAKKLGIMVIADEVY 225 (319)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~a~ 225 (319)
.+++.+.+++..+.-+ . ++++|-+-
T Consensus 251 -~ii~~~~ve~a~~~r~--~-~livDiav 275 (414)
T COG0373 251 -PIITREMVERALKIRK--R-LLIVDIAV 275 (414)
T ss_pred -cccCHHHHHHHHhccc--C-eEEEEecC
Confidence 3455556666555332 2 88888743
No 432
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=56.19 E-value=1.8e+02 Score=27.38 Aligned_cols=94 Identities=13% Similarity=0.035 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhcCCCCEEEEcC-CCCc-----chHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc---c--CceEEE
Q 020968 120 TQAIEVILTVLARPGANILLPR-PGFP-----YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD---E--NTVALV 188 (319)
Q Consensus 120 t~ai~~~~~~l~~~gd~Vl~~~-p~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~---~--~~~~v~ 188 (319)
|-.+..++..+.+.|.+|.+.. -.|. -+...+...|+.+... .+++.+.+.+. . +...|+
T Consensus 255 TTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~---------~d~~~L~~aL~~lk~~~~~DvVL 325 (436)
T PRK11889 255 TTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV---------RDEAAMTRALTYFKEEARVDYIL 325 (436)
T ss_pred HHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec---------CCHHHHHHHHHHHHhccCCCEEE
Confidence 4444444455666675555333 2332 1223344555544322 25556655552 1 357888
Q ss_pred EcCCC-CccccccCHHHHHHHHHHH---HHcCCEEEEeCCCC
Q 020968 189 IINPG-NPCGNVYTYQHLQKIAETA---KKLGIMVIADEVYD 226 (319)
Q Consensus 189 l~~p~-nptG~~~~~~~l~~i~~~~---~~~~~~li~D~a~~ 226 (319)
+..+. ++. +...+.++.++. ..+.+++++|.+..
T Consensus 326 IDTaGRs~k----d~~lm~EL~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 326 IDTAGKNYR----ASETVEEMIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred EeCccccCc----CHHHHHHHHHHHhhcCCCeEEEEECCccC
Confidence 88773 331 113344454444 34567788887654
No 433
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=56.17 E-value=18 Score=32.78 Aligned_cols=70 Identities=24% Similarity=0.437 Sum_probs=43.3
Q ss_pred HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE--EeC
Q 020968 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI--ADE 223 (319)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li--~D~ 223 (319)
......+++....+.+.+.++|.+....+.++-.... ..++.+ |-.||.+++++|++.|+++|+-|| +|-
T Consensus 24 id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga-----~~~~~~-~~~yT~~di~~lv~yA~~~gI~VIPeid~ 95 (351)
T PF00728_consen 24 IDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGA-----YRPSDA-GGYYTKEDIRELVAYAKERGIEVIPEIDT 95 (351)
T ss_dssp HHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTT-----ESTTCT-ESEBEHHHHHHHHHHHHHTT-EEEEEEEE
T ss_pred HHHHHHcCCcEEEEEEecCCCCccccCCCccccccCc-----cccccc-cccCCHHHHHHHHHHHHHcCCceeeeccC
Confidence 4455677888888888777777765533333221100 001113 449999999999999999999888 454
No 434
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=55.85 E-value=1.5e+02 Score=26.51 Aligned_cols=109 Identities=20% Similarity=0.187 Sum_probs=57.3
Q ss_pred cEEEeCCHHHHHHHHHHHhcCC--CCE-EEEcCCCCcchHHH-HhhCCC-eEEEEeccCCCCCcCCHHHHHhhhcc-Cce
Q 020968 112 DVYLTLGCTQAIEVILTVLARP--GAN-ILLPRPGFPYYEAR-ATHSHL-EVRHFDLLPAKGWEVDLDAVEALADE-NTV 185 (319)
Q Consensus 112 ~i~~~~G~t~ai~~~~~~l~~~--gd~-Vl~~~p~~~~~~~~-~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~ 185 (319)
.+++|.|+--.=..+++.+++. .++ +.+...+|.+.... ....+- +..++..+. -|.+.+.+.+.+ ++.
T Consensus 2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI-----~D~~~v~~~~~~~~~D 76 (340)
T COG1088 2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDI-----CDRELVDRLFKEYQPD 76 (340)
T ss_pred cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccc-----cCHHHHHHHHHhcCCC
Confidence 4778888644444445554432 243 44666888664433 222222 344444332 266777777664 344
Q ss_pred EEEE-----------cCC-----CCccccccCHHHHHHHHHHHHHcCC-----EEEEeCCCCCccCCC
Q 020968 186 ALVI-----------INP-----GNPCGNVYTYQHLQKIAETAKKLGI-----MVIADEVYDHLAFGN 232 (319)
Q Consensus 186 ~v~l-----------~~p-----~nptG~~~~~~~l~~i~~~~~~~~~-----~li~D~a~~~~~~~~ 232 (319)
.|+- ..| +|-.|. --|.+.+++++. .|=.||+|+++..++
T Consensus 77 ~VvhfAAESHVDRSI~~P~~Fi~TNv~GT-------~~LLEaar~~~~~frf~HISTDEVYG~l~~~~ 137 (340)
T COG1088 77 AVVHFAAESHVDRSIDGPAPFIQTNVVGT-------YTLLEAARKYWGKFRFHHISTDEVYGDLGLDD 137 (340)
T ss_pred eEEEechhccccccccChhhhhhcchHHH-------HHHHHHHHHhcccceEEEeccccccccccCCC
Confidence 4431 122 233332 345556666652 344899999987753
No 435
>PRK06194 hypothetical protein; Provisional
Probab=55.25 E-value=1.4e+02 Score=25.82 Aligned_cols=66 Identities=20% Similarity=0.062 Sum_probs=34.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHh---hCCCeEEEEeccCCCCCcCCHHHHHhhhc
Q 020968 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARAT---HSHLEVRHFDLLPAKGWEVDLDAVEALAD 181 (319)
Q Consensus 111 ~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 181 (319)
..+++|.|+...=..+++.+.+.|.+|++..-.-........ ..+.++..+..+. -|.+.++++++
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~~ 75 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV-----SDAAQVEALAD 75 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHH
Confidence 456666554433334455677788888776543222222222 2255665566543 25566665543
No 436
>PRK10785 maltodextrin glucosidase; Provisional
Probab=55.13 E-value=44 Score=33.04 Aligned_cols=60 Identities=20% Similarity=0.326 Sum_probs=41.2
Q ss_pred cCCHHHHHhhhc---c-CceEEEEcCC-CCcccccc-------------CHHHHHHHHHHHHHcCCEEEEeCCCCCcc
Q 020968 170 EVDLDAVEALAD---E-NTVALVIINP-GNPCGNVY-------------TYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (319)
Q Consensus 170 ~~d~~~l~~~l~---~-~~~~v~l~~p-~nptG~~~-------------~~~~l~~i~~~~~~~~~~li~D~a~~~~~ 229 (319)
+-|+..|.+.+. + +..+|+|+-+ .+|+..-| +.++++++++.|+++|+.||.|-++.+..
T Consensus 175 GGDl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~ 252 (598)
T PRK10785 175 GGDLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNHTG 252 (598)
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 457777776653 1 5556665543 23332212 45899999999999999999999987644
No 437
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=55.03 E-value=82 Score=26.54 Aligned_cols=120 Identities=17% Similarity=0.148 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcE--EEeCC---HHHHHHHHHHHhcCCCCEEEEcC--CCCcchHHHHhhCCCeEEEE
Q 020968 89 ILPARRAIADYLNRDLPYKLSPDDV--YLTLG---CTQAIEVILTVLARPGANILLPR--PGFPYYEARATHSHLEVRHF 161 (319)
Q Consensus 89 ~~~lr~~ia~~~~~~~g~~~~~~~i--~~~~G---~t~ai~~~~~~l~~~gd~Vl~~~--p~~~~~~~~~~~~g~~~~~~ 161 (319)
..++++.+...+.+.= ....+ -.++. ...++..++..+.+.|- ..+.+ ...+.....++..|+.....
T Consensus 73 ~~~i~~~l~~al~~vp----~a~GvnNhmGS~~T~~~~~m~~vl~~l~~~gl-~FvDS~T~~~s~a~~~A~~~gvp~~~r 147 (213)
T PF04748_consen 73 EEEIRKRLEAALARVP----GAVGVNNHMGSRFTSDREAMRWVLEVLKERGL-FFVDSRTTPRSVAPQVAKELGVPAARR 147 (213)
T ss_dssp HHHHHHHHHHHHCCST----T-SEEEEEE-CCHHC-HHHHHHHHHHHHHTT--EEEE-S--TT-SHHHHHHHCT--EEE-
T ss_pred HHHHHHHHHHHHHHCC----CcEEEecCCCccccCCHHHHHHHHHHHHHcCC-EEEeCCCCcccHHHHHHHHcCCCEEee
Confidence 4677777777775410 11112 12222 34567777777766653 33322 22344568889999987776
Q ss_pred eccCCCCCcCCHHHHHhhhc-------cCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 162 DLLPAKGWEVDLDAVEALAD-------ENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 162 ~~~~~~~~~~d~~~l~~~l~-------~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
.+.-++. .+.+.+++.+. .+-.+|.+.||+..| .+-++++..-.++.|+-++
T Consensus 148 dvfLD~~--~~~~~I~~ql~~~~~~A~~~G~aI~Igh~~p~T-----l~~L~~~~~~l~~~gi~lV 206 (213)
T PF04748_consen 148 DVFLDND--QDEAAIRRQLDQAARIARKQGSAIAIGHPRPET-----LEALEEWLPELEAQGIELV 206 (213)
T ss_dssp SEETTST---SHHHHHHHHHHHHHHHHCCSEEEEEEE-SCCH-----HHHHHHHHHHHHHCTEEE-
T ss_pred ceecCCC--CCHHHHHHHHHHHHHhhhhcCcEEEEEcCCHHH-----HHHHHHHHhHHhhCCEEEE
Confidence 6544333 57777766553 356788889987553 2446666665666666554
No 438
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=54.51 E-value=1.5e+02 Score=25.95 Aligned_cols=91 Identities=11% Similarity=0.116 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhcCCC-CEEEEcCCCCc---chHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc
Q 020968 120 TQAIEVILTVLARPG-ANILLPRPGFP---YYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (319)
Q Consensus 120 t~ai~~~~~~l~~~g-d~Vl~~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 195 (319)
..++..+++.+.+.| |.+++++--+. .+...++.+|+..+++-... -+.+.+++..+.....+++.+-+--
T Consensus 108 ~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaPt-----t~~~rl~~i~~~a~GFiY~vs~~Gv 182 (265)
T COG0159 108 NYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAPT-----TPDERLKKIAEAASGFIYYVSRMGV 182 (265)
T ss_pred HhhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeCCC-----CCHHHHHHHHHhCCCcEEEEecccc
Confidence 445666666665656 88888884442 25677788888877665421 2556666665555456777776777
Q ss_pred cccccC-HHHHHHHHHHHHHc
Q 020968 196 CGNVYT-YQHLQKIAETAKKL 215 (319)
Q Consensus 196 tG~~~~-~~~l~~i~~~~~~~ 215 (319)
||.... ...+.++++..|++
T Consensus 183 TG~~~~~~~~~~~~v~~vr~~ 203 (265)
T COG0159 183 TGARNPVSADVKELVKRVRKY 203 (265)
T ss_pred cCCCcccchhHHHHHHHHHHh
Confidence 887655 23367777777764
No 439
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=54.51 E-value=84 Score=23.05 Aligned_cols=21 Identities=29% Similarity=0.515 Sum_probs=13.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEE
Q 020968 201 TYQHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 201 ~~~~l~~i~~~~~~~~~~li~ 221 (319)
+.++.+++.+.+++++..+.+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 446677777777776666544
No 440
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=53.98 E-value=1.1e+02 Score=25.80 Aligned_cols=98 Identities=15% Similarity=0.183 Sum_probs=53.6
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEE----c---------CCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhh
Q 020968 113 VYLTLGCTQAIEVILTVLARPGANILL----P---------RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL 179 (319)
Q Consensus 113 i~~~~G~t~ai~~~~~~l~~~gd~Vl~----~---------~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 179 (319)
++.-+||-.+..++.+++.+ .+.+.. + .+...-....++.+|+..+.++..... .--.+++.++
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~--~~~~~~l~~~ 80 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDE--EDYVEDLKEA 80 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---C--CCHHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCcc--chhhHHHHHH
Confidence 56678888888877777655 332221 1 111123467888999998888874221 1235666666
Q ss_pred hcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 180 ADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 180 l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
++. +...+ -+|.+.+...+..+-++|.+.|+-.+
T Consensus 81 l~~~~v~~v-------v~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 81 LKELKVEAV-------VFGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HCTC--SEE-------E--TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHcCCCEE-------EECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 654 22333 36888887888888889999887754
No 441
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=53.22 E-value=1e+02 Score=25.56 Aligned_cols=39 Identities=31% Similarity=0.412 Sum_probs=25.9
Q ss_pred HHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEE
Q 020968 176 VEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 176 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (319)
++...+++-.++++++. |.. +++.++++.++++|+.+|.
T Consensus 103 l~~~~~~gDvli~iS~S----G~s---~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 103 VRALGHAGDVLLAISTR----GNS---RDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHcCCCCCEEEEEeCC----CCC---HHHHHHHHHHHHCCCEEEE
Confidence 33334444455556654 333 6799999999999988765
No 442
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=53.17 E-value=94 Score=23.22 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=43.2
Q ss_pred CCEEEEcCCCCcchHHHHhh-CCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHH
Q 020968 134 GANILLPRPGFPYYEARATH-SHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETA 212 (319)
Q Consensus 134 gd~Vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~ 212 (319)
|-+++.+.-+ ...++. .|+.+..+.+.+.++ + +.+.+.+..+..-++++.|+ |-|......+-..|.+.|
T Consensus 27 Gf~i~AT~gT----a~~L~~~~Gi~v~~vk~~~~~g---~-~~i~~~i~~g~i~~VInt~~-~~~~~~~~~dg~~iRr~a 97 (115)
T cd01422 27 RHRLVATGTT----GLLIQEATGLTVNRMKSGPLGG---D-QQIGALIAEGEIDAVIFFRD-PLTAQPHEPDVKALLRLC 97 (115)
T ss_pred CCEEEEechH----HHHHHHhhCCcEEEEecCCCCc---h-hHHHHHHHcCceeEEEEcCC-CCCCCcccccHHHHHHHH
Confidence 5555444422 233344 677777664422222 3 33555555544444445553 223322135688999999
Q ss_pred HHcCCEEEE
Q 020968 213 KKLGIMVIA 221 (319)
Q Consensus 213 ~~~~~~li~ 221 (319)
.+++++++.
T Consensus 98 ~~~~Ip~~T 106 (115)
T cd01422 98 DVYNIPLAT 106 (115)
T ss_pred HHcCCCEEE
Confidence 999998764
No 443
>smart00642 Aamy Alpha-amylase domain.
Probab=52.83 E-value=22 Score=28.58 Aligned_cols=28 Identities=29% Similarity=0.502 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCCcc
Q 020968 202 YQHLQKIAETAKKLGIMVIADEVYDHLA 229 (319)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~ 229 (319)
.++++++++.|+++|+.||.|-+..+..
T Consensus 69 ~~d~~~lv~~~h~~Gi~vilD~V~NH~~ 96 (166)
T smart00642 69 MEDFKELVDAAHARGIKVILDVVINHTS 96 (166)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCC
Confidence 3899999999999999999999887744
No 444
>PRK07063 short chain dehydrogenase; Provisional
Probab=52.43 E-value=1.5e+02 Score=25.22 Aligned_cols=67 Identities=19% Similarity=0.088 Sum_probs=34.6
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhh-----CCCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH-----SHLEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 109 ~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
....+++|.|+...=..+.+.|.+.|.+|++..-.-......... .+.++..+..+.. |.+.+++.+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~ 77 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT-----DAASVAAAV 77 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCC-----CHHHHHHHH
Confidence 344566666554433445566778898887765433333322222 2445555555432 455555544
No 445
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=52.41 E-value=64 Score=24.97 Aligned_cols=59 Identities=32% Similarity=0.370 Sum_probs=39.7
Q ss_pred CcCCHHHHHhhhcc-CceEEEEcCCCCcccccc-CHHHHHHHHHHHHHc--CCEEE-EeCCCCC
Q 020968 169 WEVDLDAVEALADE-NTVALVIINPGNPCGNVY-TYQHLQKIAETAKKL--GIMVI-ADEVYDH 227 (319)
Q Consensus 169 ~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~--~~~li-~D~a~~~ 227 (319)
...+.+.|.+.+.+ ++..+++..|-|..|..= ....+++.++..++. ++.|+ +||-|..
T Consensus 36 ~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 36 REKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred CchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 35789999998865 578899999977766532 224456666655443 76554 8987764
No 446
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=52.36 E-value=1.3e+02 Score=26.41 Aligned_cols=143 Identities=17% Similarity=0.227 Sum_probs=61.5
Q ss_pred cHHHHHHHHHHhhcCCCCC------CCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEE
Q 020968 64 ASVAVDAIVHSVRSARFNC------YSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGANI 137 (319)
Q Consensus 64 ~~~~~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~V 137 (319)
.....+.+++.+.+..+.. |....+..+.-..+++.+.. ..-+++++.|...+.. +...+.+. -.|
T Consensus 13 ~~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~~------~~~DlIi~~gt~aa~~-~~~~~~~~-iPV 84 (294)
T PF04392_consen 13 LDDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLKA------QKPDLIIAIGTPAAQA-LAKHLKDD-IPV 84 (294)
T ss_dssp HHHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHCC------TS-SEEEEESHHHHHH-HHHH-SS--S-E
T ss_pred HHHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHhc------CCCCEEEEeCcHHHHH-HHHhcCCC-cEE
Confidence 3556666666665533222 22334544444445554522 3457899888777655 34444322 344
Q ss_pred EEc---CCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHH
Q 020968 138 LLP---RPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKK 214 (319)
Q Consensus 138 l~~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~ 214 (319)
++. +|....+......-|-.+.-+.- ...+.-.++-+.+.+..-.++.++.+++.+.+. ...+.+.+.+++
T Consensus 85 Vf~~V~dp~~~~l~~~~~~~~~nvTGv~~--~~~~~~~l~l~~~l~P~~k~igvl~~~~~~~~~----~~~~~~~~~a~~ 158 (294)
T PF04392_consen 85 VFCGVSDPVGAGLVDSLDRPGKNVTGVSE--RPPIEKQLELIKKLFPDAKRIGVLYDPSEPNSV----AQIEQLRKAAKK 158 (294)
T ss_dssp EEECES-TTTTTS-S-SSS--SSEEEEEE-----HHHHHHHHHHHSTT--EEEEEEETT-HHHH----HHHHHHHHHHHH
T ss_pred EEEeccChhhhhccccccCCCCCEEEEEC--CcCHHHHHHHHHHhCCCCCEEEEEecCCCccHH----HHHHHHHHHHHH
Confidence 432 34443332222222223333321 111111223333333333344456677665432 457777788888
Q ss_pred cCCEEE
Q 020968 215 LGIMVI 220 (319)
Q Consensus 215 ~~~~li 220 (319)
.|+-++
T Consensus 159 ~g~~l~ 164 (294)
T PF04392_consen 159 LGIELV 164 (294)
T ss_dssp TT-EEE
T ss_pred cCCEEE
Confidence 887654
No 447
>PLN00191 enolase
Probab=52.09 E-value=71 Score=30.39 Aligned_cols=99 Identities=12% Similarity=0.130 Sum_probs=60.8
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCcc-hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcc
Q 020968 118 GCTQAIEVILTVLARPGANILLPRPGFPY-YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPC 196 (319)
Q Consensus 118 G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt 196 (319)
.+.+++. .+..+.++-+-+.+++|.... +..+.+.... ..+++-.++.+.-++..+++.+..+..-+++.-++.-
T Consensus 296 s~~e~i~-~~~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~--~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl~qi- 371 (457)
T PLN00191 296 SGDELID-LYKEFVSDYPIVSIEDPFDQDDWEHWAKLTSL--EDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKVNQI- 371 (457)
T ss_pred CHHHHHH-HHHHHhhcCCcEEEECCCCcccHHHHHHHHcc--CCCcEEccCcccCCHHHHHHHHHhCCCCEEEeccccc-
Confidence 4445554 444555555677899998643 3333332222 2233333333446789999988876655555555544
Q ss_pred ccccCHHHHHHHHHHHHHcCCEEEEeC
Q 020968 197 GNVYTYQHLQKIAETAKKLGIMVIADE 223 (319)
Q Consensus 197 G~~~~~~~l~~i~~~~~~~~~~li~D~ 223 (319)
|-+ .+..+++++|+++|+.+++-.
T Consensus 372 GGI---Tea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 372 GTV---TESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred CCH---HHHHHHHHHHHHCCCEEEeCC
Confidence 444 578889999999999987644
No 448
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=51.49 E-value=2e+02 Score=26.87 Aligned_cols=77 Identities=16% Similarity=0.125 Sum_probs=36.0
Q ss_pred CCCcEEEeCCHHHHHHHH-HHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968 109 SPDDVYLTLGCTQAIEVI-LTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (319)
Q Consensus 109 ~~~~i~~~~G~t~ai~~~-~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 187 (319)
....+++|.| +.+|-.. +..+.+.|.+|++....-..........+.++..+..+. -|.+.+++.+. +...+
T Consensus 177 ~gK~VLITGA-SgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv-----sd~~~v~~~l~-~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGA-SGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQV-----GQEAALAELLE-KVDIL 249 (406)
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeC-----CCHHHHHHHhC-CCCEE
Confidence 3445666654 4444444 456777888877654222211111111222233333322 15566666654 45566
Q ss_pred EEcCC
Q 020968 188 VIINP 192 (319)
Q Consensus 188 ~l~~p 192 (319)
+.+..
T Consensus 250 InnAG 254 (406)
T PRK07424 250 IINHG 254 (406)
T ss_pred EECCC
Confidence 54433
No 449
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=51.05 E-value=1.5e+02 Score=25.05 Aligned_cols=66 Identities=12% Similarity=0.028 Sum_probs=36.1
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc
Q 020968 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD 181 (319)
Q Consensus 111 ~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 181 (319)
..+++|.|+...=..+++.|.+.|.+|++...............+.++..+..+. -|.+.+++++.
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 72 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDV-----TRQDSIDRIVA 72 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHH
Confidence 3456665544433445556777898888776555444444444444455555432 25555555443
No 450
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=50.65 E-value=1.3e+02 Score=26.42 Aligned_cols=97 Identities=21% Similarity=0.243 Sum_probs=52.2
Q ss_pred HHHHHHHhcCCCCEEEEcC-CCCc-----chHHHHhhCCCeEEEEeccCCCCCcCCHHH-----HHhhhccCceEEEEcC
Q 020968 123 IEVILTVLARPGANILLPR-PGFP-----YYEARATHSHLEVRHFDLLPAKGWEVDLDA-----VEALADENTVALVIIN 191 (319)
Q Consensus 123 i~~~~~~l~~~gd~Vl~~~-p~~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~-----l~~~l~~~~~~v~l~~ 191 (319)
+..++..+.+.|.+|++-+ -.|. ....+++..|..+..... ..|+.. ++.+...+-..|++..
T Consensus 89 ~akLA~~l~~~g~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~~~------~~dp~~~~~~~l~~~~~~~~D~ViIDT 162 (272)
T TIGR00064 89 IAKLANKLKKQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQKE------GADPAAVAFDAIQKAKARNIDVVLIDT 162 (272)
T ss_pred HHHHHHHHHhcCCEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeCCC------CCCHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 3333344566776665443 2232 223355666755442221 234433 3333334567888888
Q ss_pred CC-CccccccCHHHHHHHHHHHH------HcCCEEEEeCCCC
Q 020968 192 PG-NPCGNVYTYQHLQKIAETAK------KLGIMVIADEVYD 226 (319)
Q Consensus 192 p~-nptG~~~~~~~l~~i~~~~~------~~~~~li~D~a~~ 226 (319)
|. ++. ...-.++++++.+.+. ..+.++++|...+
T Consensus 163 ~G~~~~-d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~ 203 (272)
T TIGR00064 163 AGRLQN-KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTG 203 (272)
T ss_pred CCCCcc-hHHHHHHHHHHHHHHhcccCCCCceEEEEEECCCC
Confidence 84 333 2111257778877777 6678888998643
No 451
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=50.53 E-value=1.9e+02 Score=25.98 Aligned_cols=58 Identities=19% Similarity=0.220 Sum_probs=38.5
Q ss_pred CCcCCHHHHHhhhc---c---CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCc
Q 020968 168 GWEVDLDAVEALAD---E---NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHL 228 (319)
Q Consensus 168 ~~~~d~~~l~~~l~---~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~ 228 (319)
+..++.++++..++ . +...|+++ -+=|.|.. .+...+|+++|++.++.+++|..-..+
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g~~--~d~y~~li~~~~~~g~~vilD~Sg~~L 171 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLS-GSLPPGVP--PDAYAELIRILRQQGAKVILDTSGEAL 171 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEe-CCCCCCCC--HHHHHHHHHHHHhcCCeEEEECChHHH
Confidence 34566666665432 1 23344444 34465553 467899999999999999999876655
No 452
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=50.49 E-value=82 Score=26.51 Aligned_cols=52 Identities=19% Similarity=0.216 Sum_probs=37.5
Q ss_pred HHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCC
Q 020968 173 LDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYD 226 (319)
Q Consensus 173 ~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 226 (319)
.+.++++++.+..++-+=.-+..+-.. .+..+++.++|++|++.+|+++-+.
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~d 75 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVD 75 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHH
Confidence 788899988876666554444333222 3667899999999999999988443
No 453
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=49.92 E-value=93 Score=27.43 Aligned_cols=86 Identities=20% Similarity=0.262 Sum_probs=58.8
Q ss_pred CCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHH
Q 020968 134 GANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213 (319)
Q Consensus 134 gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~ 213 (319)
|...+.--|.|.......+..++++..+...+. +-.+.+.++++...+.+++.+-+=| ..+..++.+.++
T Consensus 44 gG~~~~g~PVf~tV~EA~~~~~a~~svI~Vp~~----~aadai~EAida~i~liv~ITEgIP------~~D~~~~~~~a~ 113 (293)
T COG0074 44 GGQTILGLPVFNTVEEAVKETGANASVIFVPPP----FAADAILEAIDAGIKLVVIITEGIP------VLDMLELKRYAR 113 (293)
T ss_pred CceEEcCccHHHHHHHHHHhhCCCEEEEecCcH----HHHHHHHHHHhCCCcEEEEEeCCCC------HHHHHHHHHHHH
Confidence 445555678888888888877877665554332 3556777788877777765554433 377888889999
Q ss_pred HcCCEEEEeCCCCCcc
Q 020968 214 KLGIMVIADEVYDHLA 229 (319)
Q Consensus 214 ~~~~~li~D~a~~~~~ 229 (319)
+.+..+|==++=+-..
T Consensus 114 ~~g~~iiGPncpGiI~ 129 (293)
T COG0074 114 EKGTRLIGPNCPGIIT 129 (293)
T ss_pred hcCCEEECCCCCccCc
Confidence 9998887655555443
No 454
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=49.75 E-value=1.6e+02 Score=27.67 Aligned_cols=110 Identities=21% Similarity=0.225 Sum_probs=61.5
Q ss_pred CCCCCcEEEeCC-----HHHHHHHHHHHhcCCCCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhh
Q 020968 107 KLSPDDVYLTLG-----CTQAIEVILTVLARPGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGWEVDLDAVEAL 179 (319)
Q Consensus 107 ~~~~~~i~~~~G-----~t~ai~~~~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 179 (319)
.+-+-.+++..| =+-.+..+...+.+.+ +|++.+-.=+. ...-++.+|.....+.+..+ .+++.+.+.
T Consensus 89 G~V~Gs~iLIgGdPGIGKSTLLLQva~~lA~~~-~vLYVsGEES~~QiklRA~RL~~~~~~l~l~aE----t~~e~I~~~ 163 (456)
T COG1066 89 GLVPGSVILIGGDPGIGKSTLLLQVAARLAKRG-KVLYVSGEESLQQIKLRADRLGLPTNNLYLLAE----TNLEDIIAE 163 (456)
T ss_pred CcccccEEEEccCCCCCHHHHHHHHHHHHHhcC-cEEEEeCCcCHHHHHHHHHHhCCCccceEEehh----cCHHHHHHH
Confidence 444555555433 2334444555555566 66665544433 34556677754444444332 478888887
Q ss_pred hcc-CceEEEEcCCC---Ccc-----ccccCH-HHHHHHHHHHHHcCCEEEE
Q 020968 180 ADE-NTVALVIINPG---NPC-----GNVYTY-QHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 180 l~~-~~~~v~l~~p~---npt-----G~~~~~-~~l~~i~~~~~~~~~~li~ 221 (319)
++. ++.++++.+.+ +|. |.+--. +--.++.++||++|+.+++
T Consensus 164 l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 164 LEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 754 67777777653 232 544111 2235678899999987653
No 455
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=49.67 E-value=1.7e+02 Score=25.11 Aligned_cols=96 Identities=11% Similarity=0.128 Sum_probs=53.0
Q ss_pred HHHHHHHhcCCC-CEEEEcCCCCcc---hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcccc
Q 020968 123 IEVILTVLARPG-ANILLPRPGFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGN 198 (319)
Q Consensus 123 i~~~~~~l~~~g-d~Vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 198 (319)
+...+..+.+-| +.|++++-.+.. +...++.+|++...+-. +. -..+.++..++.....+++...+-.||.
T Consensus 93 ~~~fi~~~~~aG~~giiipDl~~ee~~~~~~~~~~~g~~~i~~i~-P~----T~~~~i~~i~~~~~~~vy~~s~~g~tG~ 167 (242)
T cd04724 93 LERFLRDAKEAGVDGLIIPDLPPEEAEEFREAAKEYGLDLIFLVA-PT----TPDERIKKIAELASGFIYYVSRTGVTGA 167 (242)
T ss_pred HHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHHHHcCCcEEEEeC-CC----CCHHHHHHHHhhCCCCEEEEeCCCCCCC
Confidence 455666666666 778887754432 45667788887765332 11 2566677766634445555444444443
Q ss_pred c--cCHHHHHHHHHHHHHcCCEEEEeC
Q 020968 199 V--YTYQHLQKIAETAKKLGIMVIADE 223 (319)
Q Consensus 199 ~--~~~~~l~~i~~~~~~~~~~li~D~ 223 (319)
. +...-.+.+.++.+..+..+++|.
T Consensus 168 ~~~~~~~~~~~i~~lr~~~~~pI~vgg 194 (242)
T cd04724 168 RTELPDDLKELIKRIRKYTDLPIAVGF 194 (242)
T ss_pred ccCCChhHHHHHHHHHhcCCCcEEEEc
Confidence 2 333333444444443467777765
No 456
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=49.28 E-value=81 Score=27.93 Aligned_cols=52 Identities=17% Similarity=0.206 Sum_probs=35.5
Q ss_pred CHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc
Q 020968 172 DLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (319)
Q Consensus 172 d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~ 229 (319)
-++.++++...+.+.+++..... +..+-+++.++++++|+.++==++.+.+.
T Consensus 76 v~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~~girilGPNc~Giin 127 (286)
T TIGR01019 76 AADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEESGTRLIGPNCPGIIT 127 (286)
T ss_pred HHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCEEECCCCceEEc
Confidence 45677777777777776665443 22335789999999999988555555433
No 457
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=49.15 E-value=1.6e+02 Score=25.54 Aligned_cols=101 Identities=17% Similarity=0.205 Sum_probs=58.9
Q ss_pred CCCcEEEeCCHHHHHHHHH-HHh--------c-----C---CCCEEEEcCCCCcc--hHHHHhhCCCeEEEEeccCCCCC
Q 020968 109 SPDDVYLTLGCTQAIEVIL-TVL--------A-----R---PGANILLPRPGFPY--YEARATHSHLEVRHFDLLPAKGW 169 (319)
Q Consensus 109 ~~~~i~~~~G~t~ai~~~~-~~l--------~-----~---~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~ 169 (319)
...+|++|.|+...-...- ... + + +...|+...+-|+. -...++.+++++.... ++|.
T Consensus 129 ~~~~iflttGsk~L~~f~~~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~al~~~~~i~~lVtK---~SG~ 205 (249)
T PF02571_consen 129 GGGRIFLTTGSKNLPPFVPAPLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRALFRQYGIDVLVTK---ESGG 205 (249)
T ss_pred CCCCEEEeCchhhHHHHhhcccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHHHHHHcCCCEEEEc---CCCc
Confidence 4589999999865443321 110 0 0 12345544444432 2456677888876444 2332
Q ss_pred cCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHH
Q 020968 170 EVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAK 213 (319)
Q Consensus 170 ~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~ 213 (319)
.-..++++.+..-+...|++..|.-|.|... ...++++.++++
T Consensus 206 ~g~~eKi~AA~~lgi~vivI~RP~~~~~~~~-~~~~~e~l~~l~ 248 (249)
T PF02571_consen 206 SGFDEKIEAARELGIPVIVIKRPPEPYGDPV-VETIEELLDWLE 248 (249)
T ss_pred hhhHHHHHHHHHcCCeEEEEeCCCCCCCCcc-cCCHHHHHHHHh
Confidence 2456777777777889999999977655443 134566666553
No 458
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=48.91 E-value=54 Score=29.97 Aligned_cols=46 Identities=17% Similarity=0.131 Sum_probs=20.1
Q ss_pred CHHHHHhhhccCceEEEEcCC-CCccc--cccCHHHHHHHHHHHHHcCC
Q 020968 172 DLDAVEALADENTVALVIINP-GNPCG--NVYTYQHLQKIAETAKKLGI 217 (319)
Q Consensus 172 d~~~l~~~l~~~~~~v~l~~p-~nptG--~~~~~~~l~~i~~~~~~~~~ 217 (319)
++++++.++.....+|++.-+ -|-.+ ..++.+++++.++.|+++|.
T Consensus 15 ~l~~l~~ai~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gk 63 (347)
T COG0826 15 NLEDLKAAIAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGK 63 (347)
T ss_pred CHHHHHHHHHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCC
Confidence 444444444444444444433 12222 22444555555555555444
No 459
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=48.83 E-value=2.2e+02 Score=28.02 Aligned_cols=99 Identities=16% Similarity=0.157 Sum_probs=57.9
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEc-CCCCcc------hHHHHhhCCC-eE-EEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968 117 LGCTQAIEVILTVLARPGANILLP-RPGFPY------YEARATHSHL-EV-RHFDLLPAKGWEVDLDAVEALADENTVAL 187 (319)
Q Consensus 117 ~G~t~ai~~~~~~l~~~gd~Vl~~-~p~~~~------~~~~~~~~g~-~~-~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 187 (319)
.+...|...+..++. .+.+|++. +-.-.+ ....++..|. .+ .++|-.-.++|+++.+.+++....+..++
T Consensus 53 ~~m~~a~~ri~~ai~-~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~~~~Li 131 (575)
T PRK11070 53 SGIEKAVELLYNALR-EGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHARGAQLI 131 (575)
T ss_pred hCHHHHHHHHHHHHH-CCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhcCCCEE
Confidence 556666666666654 34455443 222221 2344556676 33 34554446889999999999877667777
Q ss_pred EEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCC
Q 020968 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVY 225 (319)
Q Consensus 188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~ 225 (319)
+.+.. |.. -.+.++.|++.|+-+|+=|-|
T Consensus 132 ItvD~----Gi~-----~~e~i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 132 VTVDN----GIS-----SHAGVAHAHALGIPVLVTDHH 160 (575)
T ss_pred EEEcC----CcC-----CHHHHHHHHHCCCCEEEECCC
Confidence 66643 222 123346677888877765544
No 460
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=47.93 E-value=2.2e+02 Score=26.54 Aligned_cols=88 Identities=13% Similarity=0.109 Sum_probs=42.9
Q ss_pred CcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHH---HHHhcCCCCEEEEcCC------------CCcc---h
Q 020968 86 TVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVI---LTVLARPGANILLPRP------------GFPY---Y 147 (319)
Q Consensus 86 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~---~~~l~~~gd~Vl~~~p------------~~~~---~ 147 (319)
+.|..+-.+.--+|.+. .|...+....++..|++.++..+ ..+| +.|-.+++..- .|.. .
T Consensus 17 p~gc~~~v~~qi~~~~~-~~~~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~ 94 (398)
T PRK13656 17 PVGCEANVKEQIEYVKA-QGPIANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAF 94 (398)
T ss_pred CHHHHHHHHHHHHHHHh-cCCcCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHH
Confidence 34554444444445544 22222333455555555577666 6677 78875444321 1111 2
Q ss_pred HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 148 EARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 148 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
...++..|.....++.+.. +.+.+++.+
T Consensus 95 ~~~a~~~G~~a~~i~~DVs-----s~E~v~~li 122 (398)
T PRK13656 95 DKFAKAAGLYAKSINGDAF-----SDEIKQKVI 122 (398)
T ss_pred HHHHHhcCCceEEEEcCCC-----CHHHHHHHH
Confidence 3344556766666665532 445554443
No 461
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=47.63 E-value=1e+02 Score=22.04 Aligned_cols=68 Identities=16% Similarity=0.127 Sum_probs=43.4
Q ss_pred cchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEE-EcCCCCccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968 145 PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALV-IINPGNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222 (319)
Q Consensus 145 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~-l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 222 (319)
..|...++..|.+.... ...++..-....|+..+.. +.+|+ +++.. +..-...+.+.|+++|++++.=
T Consensus 13 ~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~~-aD~VIv~t~~v-------sH~~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 13 RRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIKK-ADLVIVFTDYV-------SHNAMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred HHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcCC-CCEEEEEeCCc-------ChHHHHHHHHHHHHcCCcEEEE
Confidence 45778889999998877 2233333343447777664 34444 33332 2255788899999999887653
No 462
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=46.74 E-value=1.7e+02 Score=24.35 Aligned_cols=77 Identities=26% Similarity=0.128 Sum_probs=38.4
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc------cCc
Q 020968 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD------ENT 184 (319)
Q Consensus 111 ~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~------~~~ 184 (319)
..+++|.++...=..++..|.+.|..|.+...............+.++..+..+- -|.+.+++.+. .+.
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANL-----SDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4455555443333335566778888777655444333333344444444444432 24555555432 134
Q ss_pred eEEEEcCC
Q 020968 185 VALVIINP 192 (319)
Q Consensus 185 ~~v~l~~p 192 (319)
..++.+..
T Consensus 82 d~vi~~ag 89 (245)
T PRK12936 82 DILVNNAG 89 (245)
T ss_pred CEEEECCC
Confidence 55655433
No 463
>COG1010 CobJ Precorrin-3B methylase [Coenzyme metabolism]
Probab=46.66 E-value=1.1e+02 Score=26.13 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=59.7
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhc----CCC-CEEE-EcCCCCcchHHHHhhCCCeE----EEEeccCCCCCcCCHHHHHh
Q 020968 109 SPDDVYLTLGCTQAIEVILTVLA----RPG-ANIL-LPRPGFPYYEARATHSHLEV----RHFDLLPAKGWEVDLDAVEA 178 (319)
Q Consensus 109 ~~~~i~~~~G~t~ai~~~~~~l~----~~g-d~Vl-~~~p~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~d~~~l~~ 178 (319)
...+|.+.+|+-.+++..+...+ +.| ..|- -.-|.-......+..+|..+ ..+.+. +---.++.+++
T Consensus 71 ~G~~ValVSsGDpgVYgMA~lv~E~~~~~~~~~v~veVvPGvTA~~aaAa~lGAPL~hDF~~ISLS---DlLtPwe~Iek 147 (249)
T COG1010 71 EGRDVALVSSGDPGVYGMAGLVLEAAEEEGWYDVDVEVVPGVTAALAAAARLGAPLGHDFCVISLS---DLLTPWEVIEK 147 (249)
T ss_pred cCCeEEEEeCCCccHHHhHHHHHHHHHhcCCCCccEEEeCChHHHHHHHHHhCCCcccceEEEEhH---hcCCcHHHHHH
Confidence 44578787777777766555443 233 1222 23477776677777777653 333331 21224667776
Q ss_pred hhcc--Cce-EEEEcCCCCccccccCHHHHHHHHHHHHHc---C-CEEEEeCCCCC
Q 020968 179 LADE--NTV-ALVIINPGNPCGNVYTYQHLQKIAETAKKL---G-IMVIADEVYDH 227 (319)
Q Consensus 179 ~l~~--~~~-~v~l~~p~nptG~~~~~~~l~~i~~~~~~~---~-~~li~D~a~~~ 227 (319)
.+.. ... .+++-|| .+.--+ ..+.+..++..++ + ...|+-+++..
T Consensus 148 Rl~aAA~adfVi~~YNP---~s~~R~-~~~~~a~eil~~~r~~~tpVgivrnagR~ 199 (249)
T COG1010 148 RLRAAAEADFVIALYNP---ISKRRP-EQLGRAFEILREHRSPDTPVGIVRNAGRE 199 (249)
T ss_pred HHHHHhhCCEEEEEECC---ccccch-HHHHHHHHHHHHhcCCCCcEEEEecCCCC
Confidence 5542 222 3334454 433322 5577777777665 2 34556677753
No 464
>PRK08339 short chain dehydrogenase; Provisional
Probab=46.65 E-value=1.9e+02 Score=24.80 Aligned_cols=66 Identities=17% Similarity=0.106 Sum_probs=32.8
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhh----CCCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 110 PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATH----SHLEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 110 ~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
...+++|.|+...=..+.+.|.+.|.+|++..-.-.......+. .+.++..+..+.. |.+++++.+
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~i~~~~ 77 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLT-----KREDLERTV 77 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC-----CHHHHHHHH
Confidence 34455555544333445566778898888765433332222221 2444555554432 455555544
No 465
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=46.59 E-value=2e+02 Score=25.06 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=45.9
Q ss_pred HHHHHHHHhcCCC-CEEEEcCCCCcc---hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccc
Q 020968 122 AIEVILTVLARPG-ANILLPRPGFPY---YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCG 197 (319)
Q Consensus 122 ai~~~~~~l~~~g-d~Vl~~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG 197 (319)
++..++..+.+-| |.+++++-.+.. +...++.+|+..+.+-... -..+.++...+.....|++..-.-.||
T Consensus 105 G~e~f~~~~~~aGvdGviipDLp~ee~~~~~~~~~~~gl~~I~lvap~-----t~~eri~~i~~~s~gfIY~vs~~GvTG 179 (258)
T PRK13111 105 GVERFAADAAEAGVDGLIIPDLPPEEAEELRAAAKKHGLDLIFLVAPT-----TTDERLKKIASHASGFVYYVSRAGVTG 179 (258)
T ss_pred CHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCC-----CCHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4555555555555 677777755542 4455566777666532211 133445544443444454433333355
Q ss_pred c--ccCHHHHHHHHHHHHHc-CCEEEE
Q 020968 198 N--VYTYQHLQKIAETAKKL-GIMVIA 221 (319)
Q Consensus 198 ~--~~~~~~l~~i~~~~~~~-~~~li~ 221 (319)
. ..+ .++.+.++.++++ ++++++
T Consensus 180 ~~~~~~-~~~~~~i~~vk~~~~~pv~v 205 (258)
T PRK13111 180 ARSADA-ADLAELVARLKAHTDLPVAV 205 (258)
T ss_pred cccCCC-ccHHHHHHHHHhcCCCcEEE
Confidence 4 222 3455555555543 555544
No 466
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=46.29 E-value=62 Score=25.34 Aligned_cols=54 Identities=30% Similarity=0.260 Sum_probs=37.8
Q ss_pred CCHHHHHhhhcc-CceEEEEcCCCCccccccCHH-HHHHHHHHHHH-cCCEE-EEeCC
Q 020968 171 VDLDAVEALADE-NTVALVIINPGNPCGNVYTYQ-HLQKIAETAKK-LGIMV-IADEV 224 (319)
Q Consensus 171 ~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~-~l~~i~~~~~~-~~~~l-i~D~a 224 (319)
.+.+.+.+.+++ ++..|++.-|.|..|...+.. ..+++++..++ .++.+ +.||-
T Consensus 40 ~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DER 97 (141)
T COG0816 40 QDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDER 97 (141)
T ss_pred hhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 488888888765 678899999999998876633 36677776654 45544 35553
No 467
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=46.26 E-value=2.1e+02 Score=25.29 Aligned_cols=97 Identities=15% Similarity=0.051 Sum_probs=51.9
Q ss_pred CHHHHHhhhcc-CceEEEEcCC-CCcccccc--------CHHHHHHHHHHHHHcCCEEEEeCCCCCccCCCCCCCCCccc
Q 020968 172 DLDAVEALADE-NTVALVIINP-GNPCGNVY--------TYQHLQKIAETAKKLGIMVIADEVYDHLAFGNTPFVPMGVF 241 (319)
Q Consensus 172 d~~~l~~~l~~-~~~~v~l~~p-~nptG~~~--------~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 241 (319)
|.+.+.+.+++ ++.+|+-+-. ++....-- ...--..++++|++.|+++|.=. .+++|+|....++..-
T Consensus 38 d~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiS--TDyVFDG~~~~~Y~E~ 115 (281)
T COG1091 38 DPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHIS--TDYVFDGEKGGPYKET 115 (281)
T ss_pred ChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEee--cceEecCCCCCCCCCC
Confidence 67778887765 4677765544 33333322 22234678899999999887422 2345555443233222
Q ss_pred CCCCCeEEEecCccccCC----------CcceeeEEEeeC
Q 020968 242 GSIVPVLTLGSISKRWIV----------PGWRLGWLVTSD 271 (319)
Q Consensus 242 ~~~~~vi~~~s~sK~~~~----------~G~r~G~i~~~~ 271 (319)
+.. +=+-+.+-||..|= -=+|.+|+.+..
T Consensus 116 D~~-~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~ 154 (281)
T COG1091 116 DTP-NPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEY 154 (281)
T ss_pred CCC-CChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCC
Confidence 211 11334455554221 125788887754
No 468
>PRK05717 oxidoreductase; Validated
Probab=46.25 E-value=1.8e+02 Score=24.56 Aligned_cols=56 Identities=11% Similarity=-0.114 Sum_probs=29.8
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968 109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (319)
Q Consensus 109 ~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 164 (319)
....+++|.|+...=..+++.+.+.|.+|++............+..+.++..+..+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D 64 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMD 64 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEcc
Confidence 33456666554443344556677788888876544333333334444445555544
No 469
>PRK15452 putative protease; Provisional
Probab=46.12 E-value=62 Score=30.65 Aligned_cols=82 Identities=9% Similarity=0.045 Sum_probs=39.8
Q ss_pred EEEEcCCCCcchHHHHhhCCCeEEEEeccCCC----CCcCCHHHHHhhhc---cCceEEEEcCCCCccccccCHHHHHHH
Q 020968 136 NILLPRPGFPYYEARATHSHLEVRHFDLLPAK----GWEVDLDAVEALAD---ENTVALVIINPGNPCGNVYTYQHLQKI 208 (319)
Q Consensus 136 ~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~i 208 (319)
.++++.-.... ...+-..|++.+++.....+ ...++.++++++++ ...+-++++.|.-|. .++++.+
T Consensus 5 eLlapag~~e~-l~aAi~~GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~g~kvyvt~n~i~~-----e~el~~~ 78 (443)
T PRK15452 5 ELLSPAGTLKN-MRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALGKKFYVVVNIAPH-----NAKLKTF 78 (443)
T ss_pred EEEEECCCHHH-HHHHHHCCCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHcCCEEEEEecCcCC-----HHHHHHH
Confidence 34555555543 34556678888877543211 01245566766653 233445555443222 2344444
Q ss_pred HHHHH---Hc--CCEEEEeC
Q 020968 209 AETAK---KL--GIMVIADE 223 (319)
Q Consensus 209 ~~~~~---~~--~~~li~D~ 223 (319)
.+..+ +. +.+++-|-
T Consensus 79 ~~~l~~l~~~gvDgvIV~d~ 98 (443)
T PRK15452 79 IRDLEPVIAMKPDALIMSDP 98 (443)
T ss_pred HHHHHHHHhCCCCEEEEcCH
Confidence 44433 32 45666553
No 470
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=45.68 E-value=36 Score=26.02 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=23.7
Q ss_pred HHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEE
Q 020968 175 AVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 175 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (319)
.+++.+..++.+++++.-..| -+.+.+.|++++++|+.
T Consensus 73 ~l~~l~~~~~P~iIvt~~~~~---------p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 73 RLEKLFSYNPPCIIVTRGLEP---------PPELIELAEKYNIPLLR 110 (127)
T ss_dssp HHHHHCTTT-S-EEEETTT------------HHHHHHHHHCT--EEE
T ss_pred HHHHHhCCCCCEEEEECcCCC---------CHHHHHHHHHhCCcEEE
Confidence 455556678888988876644 57888889999998874
No 471
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=45.61 E-value=52 Score=30.80 Aligned_cols=94 Identities=10% Similarity=0.063 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCc
Q 020968 120 TQAIEVILTVLARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNP 195 (319)
Q Consensus 120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 195 (319)
.+++... ..+.++-+-+++++|.... +....+..|..+ ++..++.+.-++..+++.+..+..-++..-++.-
T Consensus 264 ~eai~~~-~~l~e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~i---pi~gdE~~~~~~~~~~~~i~~~a~d~v~ik~~~i 339 (408)
T cd03313 264 EELIDYY-KELVKKYPIVSIEDPFDEDDWEGWAKLTAKLGDKI---QIVGDDLFVTNPERLKKGIEKKAANALLIKVNQI 339 (408)
T ss_pred HHHHHHH-HHHHHhCCcEEEEeCCCCcCHHHHHHHHHhcCCCC---eEEcCCcccCCHHHHHHHHHhCCCCEEEEccccc
Confidence 4444433 3334444577889988643 344444442222 2222222345789999988776555555666654
Q ss_pred cccccCHHHHHHHHHHHHHcCCEEEE
Q 020968 196 CGNVYTYQHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 196 tG~~~~~~~l~~i~~~~~~~~~~li~ 221 (319)
.|. .+..+++++|+++|+.+++
T Consensus 340 GGi----te~~~ia~lA~~~G~~~~~ 361 (408)
T cd03313 340 GTL----TETIEAIKLAKKNGYGVVV 361 (408)
T ss_pred CCH----HHHHHHHHHHHHcCCeEEc
Confidence 444 5789999999999988763
No 472
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=45.60 E-value=24 Score=34.86 Aligned_cols=35 Identities=31% Similarity=0.581 Sum_probs=28.4
Q ss_pred CCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc
Q 020968 192 PGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (319)
Q Consensus 192 p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~ 229 (319)
|+.|++.. ++++++++.|+++|+-||.|-+|.+..
T Consensus 221 p~~~~~~~---~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 221 PYDPATRI---RELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred CCccchHH---HHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 44444433 899999999999999999999997754
No 473
>PRK05872 short chain dehydrogenase; Provisional
Probab=45.28 E-value=2.1e+02 Score=25.02 Aligned_cols=67 Identities=21% Similarity=0.013 Sum_probs=35.5
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCC--CeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSH--LEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 109 ~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
....+++|.|+...=..+++.+.+.|.+|++..-.-.......+..+ .++..+..+. -|.+++++.+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-----~d~~~v~~~~ 76 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV-----TDLAAMQAAA 76 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-----CCHHHHHHHH
Confidence 34556666655444444556677789888876544433334444333 3444444432 2555555544
No 474
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=44.96 E-value=1.1e+02 Score=26.40 Aligned_cols=94 Identities=18% Similarity=0.256 Sum_probs=46.0
Q ss_pred cEEEeCCHHHHHHHHHHHhcCCCCEEEEcC-CCCcchHHHHhhCCCeEEEEeccCCCCCcC-CHHHHHhhhccCceEEEE
Q 020968 112 DVYLTLGCTQAIEVILTVLARPGANILLPR-PGFPYYEARATHSHLEVRHFDLLPAKGWEV-DLDAVEALADENTVALVI 189 (319)
Q Consensus 112 ~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~-p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-d~~~l~~~l~~~~~~v~l 189 (319)
+|++-.|+++|-.++ ..|.+.|. |++.. ..|. ............+.. ..+ +.+++++.+.++...+++
T Consensus 2 ~ILvlgGTtE~r~la-~~L~~~g~-v~~sv~t~~g---~~~~~~~~~~~~v~~-----G~lg~~~~l~~~l~~~~i~~vI 71 (249)
T PF02571_consen 2 KILVLGGTTEGRKLA-ERLAEAGY-VIVSVATSYG---GELLKPELPGLEVRV-----GRLGDEEGLAEFLRENGIDAVI 71 (249)
T ss_pred EEEEEechHHHHHHH-HHHHhcCC-EEEEEEhhhh---HhhhccccCCceEEE-----CCCCCHHHHHHHHHhCCCcEEE
Confidence 577888888887744 44556666 44332 2222 111111111111221 135 788888877654333333
Q ss_pred cCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 190 INPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 190 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
.-.| |.-..+ -+.+.+.|++.|+..+
T Consensus 72 DATH-PfA~~i----s~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 72 DATH-PFAAEI----SQNAIEACRELGIPYL 97 (249)
T ss_pred ECCC-chHHHH----HHHHHHHHhhcCcceE
Confidence 3222 443332 3555666777676544
No 475
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=44.04 E-value=21 Score=31.26 Aligned_cols=29 Identities=31% Similarity=0.447 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCCccC
Q 020968 202 YQHLQKIAETAKKLGIMVIADEVYDHLAF 230 (319)
Q Consensus 202 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~ 230 (319)
.++++++++.|+++|+.||.|-+..+...
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~NH~~~ 79 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPNHTSD 79 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETSEEET
T ss_pred hhhhhhhhhccccccceEEEeeecccccc
Confidence 38999999999999999999999886543
No 476
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=43.92 E-value=2e+02 Score=24.42 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=56.3
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcch-HHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEE
Q 020968 109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYY-EARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVAL 187 (319)
Q Consensus 109 ~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 187 (319)
....|++..||..|...+ ..|++.|..|.+..|....- ...+..-.++. +.- . ++.++++ +..+|
T Consensus 24 ~~~~VLVVGGG~VA~RK~-~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~--~~r----~--~~~~dl~-----g~~LV 89 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKG-KTFLKKGCYVYILSKKFSKEFLDLKKYGNLKL--IKG----N--YDKEFIK-----DKHLI 89 (223)
T ss_pred CCCEEEEECCCHHHHHHH-HHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEE--EeC----C--CChHHhC-----CCcEE
Confidence 355899999999998876 45567888898888888643 23333222222 221 1 2334432 34555
Q ss_pred EEcCCCCccccccCHHHHHHHHHHHHHcCCEEE-EeC
Q 020968 188 VIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI-ADE 223 (319)
Q Consensus 188 ~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li-~D~ 223 (319)
+.+. +++ +-=++|.+.|++.++++. +|+
T Consensus 90 iaAT-dD~-------~vN~~I~~~a~~~~~lvn~vd~ 118 (223)
T PRK05562 90 VIAT-DDE-------KLNNKIRKHCDRLYKLYIDCSD 118 (223)
T ss_pred EECC-CCH-------HHHHHHHHHHHHcCCeEEEcCC
Confidence 5543 332 445788899998876554 455
No 477
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=43.80 E-value=2.2e+02 Score=24.72 Aligned_cols=74 Identities=19% Similarity=0.263 Sum_probs=40.2
Q ss_pred CCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHh---hhccCceEEEEcCCCCccccccCHHHHHHHH
Q 020968 133 PGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA---LADENTVALVIINPGNPCGNVYTYQHLQKIA 209 (319)
Q Consensus 133 ~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~---~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~ 209 (319)
++..+++..+.| ...++.+|++...+.. .+-.+.+.+|.+ .++++...+++..++.+... .+
T Consensus 169 ~~~~~v~~H~af---~Y~~~~ygl~~~~~~~---~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~------~~--- 233 (266)
T cd01018 169 KQRAFMVYHPAW---GYFARDYGLTQIPIEE---EGKEPSPADLKRLIDLAKEKGVRVVFVQPQFSTKS------AE--- 233 (266)
T ss_pred CCCeEEEECchh---HHHHHHcCCEEEecCC---CCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCcHH------HH---
Confidence 455677755554 5678899999875431 233465555554 44443333444555443311 22
Q ss_pred HHHHHcCCEEEE
Q 020968 210 ETAKKLGIMVIA 221 (319)
Q Consensus 210 ~~~~~~~~~li~ 221 (319)
.++++.|+.++.
T Consensus 234 ~la~~~g~~v~~ 245 (266)
T cd01018 234 AIAREIGAKVVT 245 (266)
T ss_pred HHHHHcCCeEEE
Confidence 556667776553
No 478
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=43.70 E-value=1.7e+02 Score=25.54 Aligned_cols=118 Identities=19% Similarity=0.171 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCC--CEEEEcC--CCCcc--hHHHHhhCCCeEEEEecc
Q 020968 91 PARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPG--ANILLPR--PGFPY--YEARATHSHLEVRHFDLL 164 (319)
Q Consensus 91 ~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~g--d~Vl~~~--p~~~~--~~~~~~~~g~~~~~~~~~ 164 (319)
..++.++++..+ .+....+++|.|-+..+..++....+.| -+|++.+ |...+ +...+...|+.+..++-
T Consensus 92 ~~~~~I~~~~~~----~I~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d- 166 (282)
T PF01008_consen 92 QAREKIADHASE----LINDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPD- 166 (282)
T ss_dssp HHHHHHHHHHHC----CC-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-G-
T ss_pred HHHHHHHHHHHH----hccCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEEEec-
Confidence 334444444433 4566788889887777777776665555 2444433 65555 23444567888776652
Q ss_pred CCCCCcCCHHHHHhhhccCceEEEEcCC-CCccccccCHHHHHHHHHHHHHcCCEEEEe
Q 020968 165 PAKGWEVDLDAVEALADENTVALVIINP-GNPCGNVYTYQHLQKIAETAKKLGIMVIAD 222 (319)
Q Consensus 165 ~~~~~~~d~~~l~~~l~~~~~~v~l~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D 222 (319)
..+-..+......|++..- --+.|.++...--..++-.|+++++++++=
T Consensus 167 ---------~~~~~~m~~~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 167 ---------SAVGYVMPRDVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp ---------GGHHHHHHCTESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred ---------hHHHHHHHHhCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 1223333321444443322 224444444444456677888899887754
No 479
>PRK06500 short chain dehydrogenase; Provisional
Probab=42.60 E-value=2e+02 Score=24.01 Aligned_cols=54 Identities=11% Similarity=-0.045 Sum_probs=29.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEecc
Q 020968 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLL 164 (319)
Q Consensus 111 ~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 164 (319)
..+++|.++...=..+++.+.+.|.+|++....-.......+..+.++..+..+
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D 60 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRAD 60 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEec
Confidence 345555554433344555677788887766543333333444456566555554
No 480
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=42.24 E-value=65 Score=27.23 Aligned_cols=65 Identities=23% Similarity=0.272 Sum_probs=39.3
Q ss_pred hHHHHhhCCCeEEEE-eccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEE
Q 020968 147 YEARATHSHLEVRHF-DLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 147 ~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (319)
....++.+|..+..+ +. ..+..--.+.++.++..++.+|++.... ++. ...+++.|++.|++++.
T Consensus 20 ~~~~a~~~g~~~~~~~~~--~~d~~~q~~~i~~~i~~~~d~Iiv~~~~-~~~-------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIVFDA--QNDPEEQIEQIEQAISQGVDGIIVSPVD-PDS-------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEEEES--TTTHHHHHHHHHHHHHTTESEEEEESSS-TTT-------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHHcCCEEEEeCCC--CCCHHHHHHHHHHHHHhcCCEEEecCCC-HHH-------HHHHHHHHhhcCceEEE
Confidence 356677889888876 32 2111122345556667788888755443 322 34555667888998886
No 481
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=42.13 E-value=2.6e+02 Score=25.19 Aligned_cols=145 Identities=16% Similarity=0.208 Sum_probs=76.2
Q ss_pred CCCcHHHHHHHHHHhhcCCC----CCCCCCcCCHHHHHHHHHHHhhhCCCCCCCCcEEEeCCHHHHHHHHHHHhcCCCCE
Q 020968 61 FRTASVAVDAIVHSVRSARF----NCYSSTVGILPARRAIADYLNRDLPYKLSPDDVYLTLGCTQAIEVILTVLARPGAN 136 (319)
Q Consensus 61 ~~~~~~~~~a~~~~~~~~~~----~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~~~G~t~ai~~~~~~l~~~gd~ 136 (319)
.+...+.++-+++.+.+... ..|....|.......+++-+.. +..+++++.++..|=- ++.+.. +-.
T Consensus 41 HpaLd~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql~~------~~~dviv~i~tp~Aq~-~~s~~~--~iP 111 (322)
T COG2984 41 HPALDAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQLVG------DKPDVIVAIATPAAQA-LVSATK--TIP 111 (322)
T ss_pred chhHHHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHhhc------CCCcEEEecCCHHHHH-HHHhcC--CCC
Confidence 34455666666666554322 2455566777777888887743 5557777777655432 333332 223
Q ss_pred EEEcC---CCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHh---hhccCceEE-EEcCCCCccccccCHHHHHHHH
Q 020968 137 ILLPR---PGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEA---LADENTVAL-VIINPGNPCGNVYTYQHLQKIA 209 (319)
Q Consensus 137 Vl~~~---p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~---~l~~~~~~v-~l~~p~nptG~~~~~~~l~~i~ 209 (319)
|++.. |.-......++.-|..+.-+. + ..+.++--+ .+-++.+.| ++.+|+.+-- ...++++.
T Consensus 112 VV~aavtd~v~a~Lv~~~~~pg~NvTGvs-----D-~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~ns----~~l~eelk 181 (322)
T COG2984 112 VVFAAVTDPVGAKLVKSLEQPGGNVTGVS-----D-LLPVAQQIELIKALLPNAKSIGVLYNPGEANS----VSLVEELK 181 (322)
T ss_pred EEEEccCchhhccCCccccCCCCceeecC-----C-cchHHHHHHHHHHhCCCCeeEEEEeCCCCccc----HHHHHHHH
Confidence 44332 222222222223333333222 0 012222222 223455544 7888865432 35689999
Q ss_pred HHHHHcCCEEEEeCC
Q 020968 210 ETAKKLGIMVIADEV 224 (319)
Q Consensus 210 ~~~~~~~~~li~D~a 224 (319)
+.+++.|+-+++=.+
T Consensus 182 ~~A~~~Gl~vve~~v 196 (322)
T COG2984 182 KEARKAGLEVVEAAV 196 (322)
T ss_pred HHHHHCCCEEEEEec
Confidence 999999998886554
No 482
>PRK07890 short chain dehydrogenase; Provisional
Probab=41.90 E-value=1.7e+02 Score=24.61 Aligned_cols=66 Identities=15% Similarity=0.014 Sum_probs=33.3
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---hhCCCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 110 PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 110 ~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
...+++|.|+...=..++..+.+.|.+|++..-.-....... ...+.++..+..+.. |.+.++..+
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~ 73 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDIT-----DEDQCANLV 73 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCC-----CHHHHHHHH
Confidence 345666655443334445567788988887653322222222 222444555555432 555555544
No 483
>PRK00077 eno enolase; Provisional
Probab=41.79 E-value=96 Score=29.22 Aligned_cols=86 Identities=7% Similarity=-0.036 Sum_probs=52.9
Q ss_pred HhcCCCCEEEEcCCCCcc----hHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHH
Q 020968 129 VLARPGANILLPRPGFPY----YEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQH 204 (319)
Q Consensus 129 ~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 204 (319)
.+.++-+-+++++|.... +....+..|-+ +++-. ++.+.-++..+++.+..+..-++..-++.-.|. .+
T Consensus 272 ~l~e~y~i~~iEdPl~~~D~~g~~~L~~~~~~~-ipI~g--dE~~~t~~~~~~~~i~~~a~d~v~ik~~~~GGi----te 344 (425)
T PRK00077 272 ELVDKYPIVSIEDGLDENDWEGWKLLTEKLGDK-VQLVG--DDLFVTNTKRLKKGIEKGAANSILIKVNQIGTL----TE 344 (425)
T ss_pred HHHhhCCcEEEEcCCCCccHHHHHHHHHhcCCC-CeEEc--CCCccCCHHHHHHHHHhCCCCEEEeCccccCCH----HH
Confidence 344445677899998753 33443443311 22222 222334788999888766555555555554444 57
Q ss_pred HHHHHHHHHHcCCEEEE
Q 020968 205 LQKIAETAKKLGIMVIA 221 (319)
Q Consensus 205 l~~i~~~~~~~~~~li~ 221 (319)
..+++++|+.+|+.+++
T Consensus 345 a~~ia~lA~~~gi~~~v 361 (425)
T PRK00077 345 TLDAIELAKRAGYTAVV 361 (425)
T ss_pred HHHHHHHHHHcCCeEEE
Confidence 89999999999987654
No 484
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=40.92 E-value=2.1e+02 Score=23.83 Aligned_cols=78 Identities=18% Similarity=-0.023 Sum_probs=38.6
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhC--CCeEEEEeccCCCCCcCCHHHHHhhhcc-----
Q 020968 110 PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARATHS--HLEVRHFDLLPAKGWEVDLDAVEALADE----- 182 (319)
Q Consensus 110 ~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~l~~----- 182 (319)
...+++|.++...=..+++.+.+.|.+|++..-.-.......... +.++..+..+. .|.+.+++++..
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV-----SDEADVEAAVAAALERF 79 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHHh
Confidence 345666655433333355566777877776543333222222222 34455555432 366666655432
Q ss_pred -CceEEEEcCC
Q 020968 183 -NTVALVIINP 192 (319)
Q Consensus 183 -~~~~v~l~~p 192 (319)
+...++.+..
T Consensus 80 ~~~d~vi~~ag 90 (251)
T PRK07231 80 GSVDILVNNAG 90 (251)
T ss_pred CCCCEEEECCC
Confidence 3455555443
No 485
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=40.59 E-value=2.3e+02 Score=24.02 Aligned_cols=67 Identities=13% Similarity=0.025 Sum_probs=35.2
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC-cchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhc
Q 020968 110 PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGF-PYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALAD 181 (319)
Q Consensus 110 ~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 181 (319)
...+++|.|+...=..+.+.|.+.|.+|++....- .......+..+.++..+..+.. |.+.+++.++
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~ 75 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLI-----QQKDIDSIVS 75 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCC-----CHHHHHHHHH
Confidence 34455555554444445566788998887654221 1112233445656666655432 5555555543
No 486
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=40.03 E-value=81 Score=22.44 Aligned_cols=88 Identities=19% Similarity=0.084 Sum_probs=42.1
Q ss_pred HHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCC-HHHHHhhhccCceEEEEcCCCCccccccCHHHH
Q 020968 127 LTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVD-LDAVEALADENTVALVIINPGNPCGNVYTYQHL 205 (319)
Q Consensus 127 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l 205 (319)
++.|.+-|-+|+.+. +....++..|+++..+.-....+-.++ ...+.+.++.+..-+++++|..-..... .+-
T Consensus 6 a~~l~~lG~~i~AT~----gTa~~L~~~Gi~~~~v~~~~~~~~~~~g~~~i~~~i~~~~IdlVIn~~~~~~~~~~--~dg 79 (95)
T PF02142_consen 6 AKRLAELGFEIYATE----GTAKFLKEHGIEVTEVVNKIGEGESPDGRVQIMDLIKNGKIDLVINTPYPFSDQEH--TDG 79 (95)
T ss_dssp HHHHHHTTSEEEEEH----HHHHHHHHTT--EEECCEEHSTG-GGTHCHHHHHHHHTTSEEEEEEE--THHHHHT--HHH
T ss_pred HHHHHHCCCEEEECh----HHHHHHHHcCCCceeeeeecccCccCCchhHHHHHHHcCCeEEEEEeCCCCccccc--CCc
Confidence 444555565665554 334555677877444321111110011 0125555555444455566543222221 367
Q ss_pred HHHHHHHHHcCCEEE
Q 020968 206 QKIAETAKKLGIMVI 220 (319)
Q Consensus 206 ~~i~~~~~~~~~~li 220 (319)
..|.+.|.++++.++
T Consensus 80 ~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 80 YKIRRAAVEYNIPLF 94 (95)
T ss_dssp HHHHHHHHHTTSHEE
T ss_pred HHHHHHHHHcCCCCc
Confidence 788899999998765
No 487
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=39.97 E-value=1.5e+02 Score=21.67 Aligned_cols=91 Identities=13% Similarity=0.103 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCcccc
Q 020968 119 CTQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGN 198 (319)
Q Consensus 119 ~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 198 (319)
..+.+..+++.+.+.|-++..+.. ....++..|+.+..+..... .-..+.+.+.++..-+++..|+...
T Consensus 11 ~k~~~~~~~~~l~~~G~~l~aT~g----T~~~l~~~gi~~~~v~~~~~-----~~~~i~~~i~~~~id~vIn~~~~~~-- 79 (110)
T cd01424 11 DKPEAVEIAKRLAELGFKLVATEG----TAKYLQEAGIPVEVVNKVSE-----GRPNIVDLIKNGEIQLVINTPSGKR-- 79 (110)
T ss_pred cHhHHHHHHHHHHHCCCEEEEchH----HHHHHHHcCCeEEEEeecCC-----CchhHHHHHHcCCeEEEEECCCCCc--
Confidence 344455566666677877776553 34455667888776654321 2244555565554445555554221
Q ss_pred ccCHHHHHHHHHHHHHcCCEEEEe
Q 020968 199 VYTYQHLQKIAETAKKLGIMVIAD 222 (319)
Q Consensus 199 ~~~~~~l~~i~~~~~~~~~~li~D 222 (319)
...+-..+.+.|-+++++++..
T Consensus 80 --~~~~~~~iRR~Av~~~ipl~T~ 101 (110)
T cd01424 80 --AIRDGFSIRRAALEYKVPYFTT 101 (110)
T ss_pred --cCccHHHHHHHHHHhCCCEEec
Confidence 1134568889999999998854
No 488
>PRK06139 short chain dehydrogenase; Provisional
Probab=39.73 E-value=2.8e+02 Score=24.90 Aligned_cols=63 Identities=25% Similarity=0.232 Sum_probs=33.4
Q ss_pred EEEeCCHHHHHHHH-HHHhcCCCCEEEEcCCCCcchH---HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 113 VYLTLGCTQAIEVI-LTVLARPGANILLPRPGFPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 113 i~~~~G~t~ai~~~-~~~l~~~gd~Vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
.++.+|++.+|-.. ++.+.+.|.+|++..-.-.... ..++..|.++..+..|-. |.+++++++
T Consensus 9 ~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~ 75 (330)
T PRK06139 9 VVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVT-----DADQVKALA 75 (330)
T ss_pred EEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHH
Confidence 44444545555444 4556778888877653332222 223345666665555432 556666554
No 489
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=39.57 E-value=1e+02 Score=26.25 Aligned_cols=57 Identities=19% Similarity=0.162 Sum_probs=45.7
Q ss_pred CCCcEEEeCCHHHHHHHHH-HHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccC
Q 020968 109 SPDDVYLTLGCTQAIEVIL-TVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLP 165 (319)
Q Consensus 109 ~~~~i~~~~G~t~ai~~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 165 (319)
.+.-|++|.+++.+|..++ +-|.+.|..|+...-.-..........|+.+..+++..
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~ 63 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSK 63 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCC
Confidence 3556888888888886654 45778999999998888888888889999988888743
No 490
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=39.57 E-value=59 Score=29.48 Aligned_cols=79 Identities=13% Similarity=0.188 Sum_probs=51.1
Q ss_pred cCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccCceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEE
Q 020968 140 PRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADENTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMV 219 (319)
Q Consensus 140 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 219 (319)
..-.|.+|...++.-..+++++.+.... -.+.+..++. +.|-|++.-| . .++.++.++|++.|++++ +.
T Consensus 57 ~~k~y~syEeLakd~~vDvVyi~~~~~q----H~evv~l~l~-~~K~VL~EKP---l--a~n~~e~~~iveaA~~rg-v~ 125 (351)
T KOG2741|consen 57 NPKAYGSYEELAKDPEVDVVYISTPNPQ----HYEVVMLALN-KGKHVLCEKP---L--AMNVAEAEEIVEAAEARG-VF 125 (351)
T ss_pred CCccccCHHHHhcCCCcCEEEeCCCCcc----HHHHHHHHHH-cCCcEEeccc---c--cCCHHHHHHHHHHHHHcC-cE
Confidence 3456788899999888888888864321 1222222333 2334555554 2 234589999999999988 66
Q ss_pred EEeCCCCCcc
Q 020968 220 IADEVYDHLA 229 (319)
Q Consensus 220 i~D~a~~~~~ 229 (319)
+.|..|..+.
T Consensus 126 ~meg~~~R~~ 135 (351)
T KOG2741|consen 126 FMEGLWWRFF 135 (351)
T ss_pred EEeeeeeecC
Confidence 6777776644
No 491
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=39.41 E-value=1.1e+02 Score=27.63 Aligned_cols=106 Identities=16% Similarity=0.199 Sum_probs=52.2
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCC--cc
Q 020968 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGN--PC 196 (319)
Q Consensus 120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~n--pt 196 (319)
+-++..+..+ .+.|..+++.+..+......++..|.....+-+.......--.+.++.++++ .+++|++.+... |.
T Consensus 70 tLaL~~~~~~-~~~g~~v~yId~E~~~~~~~a~~lGvd~~~l~v~~p~~~eq~l~~~~~li~~~~~~lIVIDSv~al~~~ 148 (321)
T TIGR02012 70 TLALHAIAEA-QKAGGTAAFIDAEHALDPVYARKLGVDIDNLLVSQPDTGEQALEIAETLVRSGAVDIIVVDSVAALVPK 148 (321)
T ss_pred HHHHHHHHHH-HHcCCcEEEEcccchhHHHHHHHcCCCHHHeEEecCCCHHHHHHHHHHHhhccCCcEEEEcchhhhccc
Confidence 3344444433 3456666666666655556677777653322221111101112333333433 567777776542 21
Q ss_pred -------ccc---cC----HHHHHHHHHHHHHcCCEEEE-eCCCC
Q 020968 197 -------GNV---YT----YQHLQKIAETAKKLGIMVIA-DEVYD 226 (319)
Q Consensus 197 -------G~~---~~----~~~l~~i~~~~~~~~~~li~-D~a~~ 226 (319)
|.. .. ...+.++..+++++|+.+|+ ...+.
T Consensus 149 ~E~e~~~g~~~~~~~aR~m~~~lr~L~~~l~~~~~tvi~tNQvr~ 193 (321)
T TIGR02012 149 AEIEGEMGDSHVGLQARLMSQALRKLTGALSKSNTTAIFINQIRE 193 (321)
T ss_pred hhhcccccccchhHHHHHHHHHHHHHHHHHHhCCCEEEEEeccee
Confidence 110 00 13456788888999987664 44443
No 492
>PRK05867 short chain dehydrogenase; Provisional
Probab=39.08 E-value=2.4e+02 Score=23.81 Aligned_cols=67 Identities=13% Similarity=0.012 Sum_probs=34.4
Q ss_pred CCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---hhCCCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 109 SPDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 109 ~~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
....+++|.|+...=..+++.|.+.|.+|++..-.-....... +..+.++..+..+. -|.+.+++++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV-----SQHQQVTSML 77 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHHHH
Confidence 3345566655444334445567788988877654333322222 23344555555443 2555555544
No 493
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=39.02 E-value=2.4e+02 Score=23.77 Aligned_cols=28 Identities=14% Similarity=0.154 Sum_probs=18.7
Q ss_pred CccccccCHHHHHHHHHHHHHcCCEEEE
Q 020968 194 NPCGNVYTYQHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 194 nptG~~~~~~~l~~i~~~~~~~~~~li~ 221 (319)
++.-..=-.+.++++.+++++|++++++
T Consensus 144 ~G~~Rar~L~~~r~~l~L~rKYd~P~VI 171 (216)
T PRK03892 144 NPYERANILRFMMKAWQLVNKYKVPRFI 171 (216)
T ss_pred CchhHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 3444443446678888889998877654
No 494
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=38.86 E-value=1.8e+02 Score=22.45 Aligned_cols=94 Identities=16% Similarity=0.136 Sum_probs=48.3
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCC-EEEEcCCC--CcchH---HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc----
Q 020968 113 VYLTLGCTQAIEVILTVLARPGA-NILLPRPG--FPYYE---ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE---- 182 (319)
Q Consensus 113 i~~~~G~t~ai~~~~~~l~~~gd-~Vl~~~p~--~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~---- 182 (319)
+++|.|++..=..+++.|.+.|. .|++.... ..... ..++..+.++..+..+.. +.+.+++.++.
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLS-----DPESIRALIEEVIKR 77 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETT-----SHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccc-----ccccccccccccccc
Confidence 45555544333344556666655 55554444 22222 233456788888876532 66666665532
Q ss_pred --CceEEEEcCCCCcccc--ccCHHHHHHHHHH
Q 020968 183 --NTVALVIINPGNPCGN--VYTYQHLQKIAET 211 (319)
Q Consensus 183 --~~~~v~l~~p~nptG~--~~~~~~l~~i~~~ 211 (319)
....++.+....+.+. -.+.+++++..+.
T Consensus 78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhhhcccc
Confidence 3445555544333333 3344666666654
No 495
>PRK08862 short chain dehydrogenase; Provisional
Probab=38.77 E-value=2.3e+02 Score=23.67 Aligned_cols=65 Identities=17% Similarity=0.144 Sum_probs=34.3
Q ss_pred CcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH---HhhCCCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 111 DDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEAR---ATHSHLEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 111 ~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
..+++|.++...=..+...|.+.|..|++..-.-...... ....+.++..+..+. -|.+++++.+
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~-----~~~~~~~~~~ 73 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKD-----FSQESIRHLF 73 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccC-----CCHHHHHHHH
Confidence 4455555544333344556778898888865443333222 223355555555543 2556665544
No 496
>PRK09354 recA recombinase A; Provisional
Probab=38.76 E-value=1.1e+02 Score=28.04 Aligned_cols=101 Identities=16% Similarity=0.161 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhcc-CceEEEEcCCCCcc--
Q 020968 120 TQAIEVILTVLARPGANILLPRPGFPYYEARATHSHLEVRHFDLLPAKGWEVDLDAVEALADE-NTVALVIINPGNPC-- 196 (319)
Q Consensus 120 t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~npt-- 196 (319)
+-++..+..+ .+.|..++..+..+......++..|..+..+-+.......--++.++.++++ .+++|++.+...-.
T Consensus 75 tLal~~~~~~-~~~G~~~~yId~E~s~~~~~a~~lGvdld~lli~qp~~~Eq~l~i~~~li~s~~~~lIVIDSvaaL~~~ 153 (349)
T PRK09354 75 TLALHAIAEA-QKAGGTAAFIDAEHALDPVYAKKLGVDIDNLLVSQPDTGEQALEIADTLVRSGAVDLIVVDSVAALVPK 153 (349)
T ss_pred HHHHHHHHHH-HHcCCcEEEECCccchHHHHHHHcCCCHHHeEEecCCCHHHHHHHHHHHhhcCCCCEEEEeChhhhcch
Confidence 3444444433 3467777777766665567778888753322221111101112333334433 56777777664211
Q ss_pred -------ccc-c-CH-----HHHHHHHHHHHHcCCEEEE
Q 020968 197 -------GNV-Y-TY-----QHLQKIAETAKKLGIMVIA 221 (319)
Q Consensus 197 -------G~~-~-~~-----~~l~~i~~~~~~~~~~li~ 221 (319)
|.. . .. ..+.++..+++++|+.+|+
T Consensus 154 ~E~eg~~gd~~~~~qar~ms~~Lr~L~~~l~k~~itvI~ 192 (349)
T PRK09354 154 AEIEGEMGDSHVGLQARLMSQALRKLTGNISKSNTTVIF 192 (349)
T ss_pred hhhcCCccccchhHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence 100 0 00 2267788888999987664
No 497
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=38.63 E-value=2.6e+02 Score=24.51 Aligned_cols=97 Identities=20% Similarity=0.219 Sum_probs=51.3
Q ss_pred cEEEeCCHHHHHHHHH-HHhcCCCCEEEEcCCCCcchH----HHHhhCCCeEEEEeccCCCCCcCCHHHHHhhhccC--c
Q 020968 112 DVYLTLGCTQAIEVIL-TVLARPGANILLPRPGFPYYE----ARATHSHLEVRHFDLLPAKGWEVDLDAVEALADEN--T 184 (319)
Q Consensus 112 ~i~~~~G~t~ai~~~~-~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~ 184 (319)
..++.+|++.+|-..+ +.|.+.|..+++..-.-.... ..-...|.++..+++|-.+. -+.+.+.+.+..+ .
T Consensus 7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~--~~~~~l~~~l~~~~~~ 84 (265)
T COG0300 7 KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP--EALERLEDELKERGGP 84 (265)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh--hHHHHHHHHHHhcCCc
Confidence 4555667777776654 456778877666554444333 33345567777777764321 2444444444443 3
Q ss_pred eEEEEcCCCC-ccc--cccCHHHHHHHHH
Q 020968 185 VALVIINPGN-PCG--NVYTYQHLQKIAE 210 (319)
Q Consensus 185 ~~v~l~~p~n-ptG--~~~~~~~l~~i~~ 210 (319)
.-++++|-.. -.| .-.+.++.+++..
T Consensus 85 IdvLVNNAG~g~~g~f~~~~~~~~~~mi~ 113 (265)
T COG0300 85 IDVLVNNAGFGTFGPFLELSLDEEEEMIQ 113 (265)
T ss_pred ccEEEECCCcCCccchhhCChHHHHHHHH
Confidence 3455566543 223 2334455555544
No 498
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=38.49 E-value=48 Score=30.22 Aligned_cols=49 Identities=16% Similarity=0.335 Sum_probs=27.0
Q ss_pred CHHHHHhhhcc-CceEEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEE
Q 020968 172 DLDAVEALADE-NTVALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVI 220 (319)
Q Consensus 172 d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 220 (319)
|+..+....+. +...|+..-+..|.|.+|+.+++.++.+.+.++|+.+-
T Consensus 13 dpv~l~~irQ~~Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~GL~~~ 62 (351)
T PF03786_consen 13 DPVTLWDIRQQPGVTGIVTALHDIPNGEVWDYEEIRALKERIEAAGLTLS 62 (351)
T ss_dssp -SS-HHHHCTSTTEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT-EEE
T ss_pred CcchHHHHHHhcCCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 33344443332 44556666677888999998999999888888886543
No 499
>PRK05876 short chain dehydrogenase; Provisional
Probab=38.48 E-value=2.6e+02 Score=24.13 Aligned_cols=66 Identities=20% Similarity=0.104 Sum_probs=34.7
Q ss_pred CCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHH---hhCCCeEEEEeccCCCCCcCCHHHHHhhh
Q 020968 110 PDDVYLTLGCTQAIEVILTVLARPGANILLPRPGFPYYEARA---THSHLEVRHFDLLPAKGWEVDLDAVEALA 180 (319)
Q Consensus 110 ~~~i~~~~G~t~ai~~~~~~l~~~gd~Vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 180 (319)
...+++|.|+...=..+++.|.+.|.+|++..-.-....... +..|.++..+..+-. |.+++++++
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~ 74 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR-----HREEVTHLA 74 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHHH
Confidence 345666655544444455667778888876543332222222 233555655555432 555665554
No 500
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=38.35 E-value=1.3e+02 Score=23.66 Aligned_cols=68 Identities=13% Similarity=0.169 Sum_probs=41.7
Q ss_pred CCeEEEEeccCCCCCcCCHHHHHhhh-ccCce-EEEEcCCCCccccccCHHHHHHHHHHHHHcCCEEEEeCCCCCcc
Q 020968 155 HLEVRHFDLLPAKGWEVDLDAVEALA-DENTV-ALVIINPGNPCGNVYTYQHLQKIAETAKKLGIMVIADEVYDHLA 229 (319)
Q Consensus 155 g~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~-~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~ 229 (319)
|+.+..+-.-+-++ | .++-..+ ..+.. +|++-.|-+|-..- .+++.+.++|.-||+++-..-+-.++.
T Consensus 48 gL~V~~~~SGplGG---D-qQIga~Ia~g~id~vIFf~DPl~~~phe---pDi~aLlRlc~v~nIP~AtN~aTA~~l 117 (143)
T TIGR00160 48 GLNINAMLSGPMGG---D-QQIGALIAEGKIDAVIFFWDPLNAQPHE---PDVKALLRLCTVWNIPLATNVATADFL 117 (143)
T ss_pred CCCeEEeccCCccH---H-HHHHHHHHhCCCCEEEEecCCCCCCCCC---cCHHHHHHHHHhhCcccccCHHHHHHH
Confidence 55555544433322 3 3343333 33444 45667876665555 569999999999999987766665544
Done!