Query 020971
Match_columns 319
No_of_seqs 151 out of 174
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 06:35:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020971.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020971hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02818 tocopherol cyclase 100.0 1E-103 2E-108 765.2 31.4 307 1-308 95-403 (403)
2 PF14249 Tocopherol_cycl: Toco 100.0 1E-83 2.2E-88 619.7 28.9 265 1-277 69-336 (336)
3 PF07143 CrtC: Hydroxyneurospo 96.7 0.011 2.3E-07 56.6 9.5 57 96-155 144-204 (312)
4 PF10974 DUF2804: Protein of u 94.6 0.4 8.6E-06 46.8 11.2 110 99-219 169-285 (333)
5 PF10974 DUF2804: Protein of u 44.2 1.6E+02 0.0036 28.6 9.4 80 199-285 121-209 (333)
6 PF08043 Xin: Xin repeat; Int 27.6 37 0.00081 19.0 1.0 14 54-67 2-15 (16)
7 COG0016 PheS Phenylalanyl-tRNA 24.5 52 0.0011 32.6 2.2 31 84-114 254-284 (335)
8 PF07806 Nod_GRP: Nodule-speci 18.8 53 0.0011 22.4 0.6 9 125-133 16-24 (38)
9 PF05720 Dicty_CAD: Cell-cell 16.1 1.4E+02 0.0031 23.8 2.6 21 104-124 50-70 (82)
10 COG5620 Uncharacterized conser 14.9 1.3E+02 0.0029 27.4 2.4 65 121-191 49-115 (200)
No 1
>PLN02818 tocopherol cyclase
Probab=100.00 E-value=9.7e-104 Score=765.21 Aligned_cols=307 Identities=70% Similarity=1.344 Sum_probs=299.7
Q ss_pred CCCCeecccCCCCCCCCCCCcchhhhhhccceecceeeeeeeEecCCCCccccccccceeEEEEeecccCCCCCCCCCCc
Q 020971 1 MLGNTFRADKGSQPPTKEVPPQEFNRRVLEGFQVTPLWHQGCIHDDGRTNFAETVKSARWEYSTRPVYGWGNVGSKQNST 80 (319)
Q Consensus 1 ~~g~~f~~~~~~~~~~~~~~~~~f~~~v~~g~q~~~~~~~g~~~~~~~~~~~~~~~~~~W~~~i~p~~g~G~~~~~~~~~ 80 (319)
+||++|+.+.+.++++++++|++|+++|+||||+||+||||+|+|+++++|.++|+++||+|+|+|+||||+..+++++|
T Consensus 95 ~lg~~~~~~~~~~~~~~~~~p~~f~~~v~~G~q~t~~~~qG~i~d~~~~~~~~~~~~~rw~y~~~p~~gwG~~~~~~~st 174 (403)
T PLN02818 95 ALGNTFAPKNGSTPPRSEVPPDEFYRRVEEGFQVTPFWHQGRLRDDGRSPYAKTVKTARWEYSTRPVYGWGDVGSKQKST 174 (403)
T ss_pred ccccccccccCCCCCcccCChHHHHHhhhcceeeccceecceecCCCCCccccccceEEEEEEeeeeeecCCCCCCCCCc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcceEEEecCceeEEEEEECCEEEEecCCcccccCCCCCCCCCCcEEEEeccCCCCCCceEEEEcccccc
Q 020971 81 AGWLAAFPVFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWVQCNVFEGATGEVALTAGGGLRQ 160 (319)
Q Consensus 81 mG~f~~lP~~e~hw~V~~~h~~asG~I~~nG~~~~f~~g~gY~EKNWG~sFP~~w~W~Q~n~F~~~~~~~slt~aGG~~~ 160 (319)
||||++||||||||||+||||+++|+|+|||++|+|++++||+|||||+|||++|+|+|||+|+++++ +|||++||+|+
T Consensus 175 mGwfs~lP~fEp~wqVlmahg~asG~I~wnG~~yeF~~apgY~EKNWG~sFP~kWfWiQCN~F~~~~~-LalTagGg~r~ 253 (403)
T PLN02818 175 AGWLAALPVFEPHWQICMAHGLATGWIEWGGERYEFEDAPSYSEKNWGGGFPSKWFWVQCNVFDGASG-LSLTAGGGLRG 253 (403)
T ss_pred cchhhhcccccCcceeeecCcEEEEEEEECCEEEEecCCCeeeEccCCCCCCcCeeeEecccCCCCCc-EEEEecCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred cCcc-cccccEEEEEEEECCEEEEEecCCcceEEEEeeceeEEEEEEeCCEEEEEEEEe-cCCCCeEeCCCCCCCccccc
Q 020971 161 LPVL-DSFENAAMIGIHYDGILYEFVPWNGVVSWEISQWGYWYFAAENQTHMVELKATT-KYPGTTLRAPTSEAGLAPAC 238 (319)
Q Consensus 161 Ip~l-~~~~~~~ligl~~~Gk~y~F~t~~g~~~~~v~~~g~w~i~~~~~~~~lei~~~~-~~~g~~L~AP~~g~gm~~~c 238 (319)
||++ .++++++||+|||+|++|||+||+|+++|++++|++|+|+++|++|+|+|++++ +.+++.|+||+.+.+|++.|
T Consensus 254 IP~l~~~fe~v~ligvh~~GkfYrFap~~g~v~w~v~pwg~W~i~a~n~~~~veIe~~~~~~~g~~LrAPt~~~gM~~~c 333 (403)
T PLN02818 254 LPLLPGVFEEVALIGVHYDGKFYEFVPWNGEVEWDVSPWGRWKLRAENETHEVELEATTAKEPGTVLRAPTTDVGLAPFC 333 (403)
T ss_pred CccccccccceEEEEEEECCEEEEEEeecceEEEEEccCCcEEEEEECCCEEEEEEEEEcCCCCceEECCCCCCCCCchh
Confidence 9998 889999899999999999999999999999999999999999999999999999 55899999999886899999
Q ss_pred cccccEEEEEEEEecccCCCCceEEEEEeeCeeEEeEeCCcccccccccccchHHHhhhcccceeccccc
Q 020971 239 KDTCFGELTLQLWERRYDGTKGKMILDVTSDMAALEVGGGPWFNTWKAKTATPELLRRTLNVPVDVDGLF 308 (319)
Q Consensus 239 ~ES~~g~v~v~L~~~~~~~~~g~~i~d~~s~~AglEiGG~~w~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 308 (319)
+||+.|+++|+|+++.++++++++|+|++|++||||+||+||+++|+++++|+|||++|+++|||||+|+
T Consensus 334 rESl~G~l~l~L~~~~~~~~~gk~I~d~~S~~AGLEvGGgpW~~~W~~~~~~~~~~~~~~~~p~d~~~~~ 403 (403)
T PLN02818 334 RDTFAGKLKLQLWERSWDGSKGKLILDATSSMAAVEVGGGPWWSTWKGTARMKEPLKSLLGLPVDVESIF 403 (403)
T ss_pred hhcCCceEEEEEEecccCCCCCcEEEEeccCceeEEecCCcCcccccccccchhhHHHHhCCccchhhcC
Confidence 9999999999999987778888999999999999999999999999999999999999999999999985
No 2
>PF14249 Tocopherol_cycl: Tocopherol cyclase
Probab=100.00 E-value=1e-83 Score=619.66 Aligned_cols=265 Identities=52% Similarity=1.101 Sum_probs=252.0
Q ss_pred CCCCeeccc---CCCCCCCCCCCcchhhhhhccceecceeeeeeeEecCCCCccccccccceeEEEEeecccCCCCCCCC
Q 020971 1 MLGNTFRAD---KGSQPPTKEVPPQEFNRRVLEGFQVTPLWHQGCIHDDGRTNFAETVKSARWEYSTRPVYGWGNVGSKQ 77 (319)
Q Consensus 1 ~~g~~f~~~---~~~~~~~~~~~~~~f~~~v~~g~q~~~~~~~g~~~~~~~~~~~~~~~~~~W~~~i~p~~g~G~~~~~~ 77 (319)
+||++|... +...+++++++|++|+++|+|||||||+||||+|+|++++++| ||+|+|+|+++||++.++|
T Consensus 69 ~lg~~~~~~~~~~~~~~~~~~~~p~~f~~~v~~g~q~t~~~~qg~~~~~~~~~~~------~w~y~i~p~~~wg~~~~~~ 142 (336)
T PF14249_consen 69 ALGNLFLGHWGKTDLKPPPGYLPPQEFERRVQEGYQVTATWNQGIIRDPGTGKTC------RWDYSIKPIYGWGNSGRLQ 142 (336)
T ss_pred ccCceeeeecccCCCCCCccccChHHhHhhhhccceeccccccCCccCCCCccEE------EEEEEEcccccCCCccccC
Confidence 688998877 6666789999999999999999999999999999999999988 9999999999999999999
Q ss_pred CCcccccccCCCCCcceEEEecCceeEEEEEECCEEEEecCCcccccCCCCCCCCCCcEEEEeccCCCCCCceEEEEccc
Q 020971 78 NSTAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWVQCNVFEGATGEVALTAGGG 157 (319)
Q Consensus 78 ~~~mG~f~~lP~~e~hw~V~~~h~~asG~I~~nG~~~~f~~g~gY~EKNWG~sFP~~w~W~Q~n~F~~~~~~~slt~aGG 157 (319)
++|||||++||+|||||||+||||+++|+|+|||++|+|++++||+|||||+|||++|+|+|||+|+++++ ++|+++||
T Consensus 143 ~~~mGwfs~lP~~Ec~w~V~~~~g~asG~i~~nG~~~~F~~g~gY~EKNWG~sFP~~W~W~QcN~F~~~~~-~slt~sgg 221 (336)
T PF14249_consen 143 KSIMGWFSFLPFFECYWQVLMAHGLASGWIEWNGKRYDFTGGPGYIEKNWGGSFPSKWFWIQCNSFDGEPD-VSLTASGG 221 (336)
T ss_pred CCccchHhhccccCCCchheecCcEEEEEEEECCEEEEECCCceeeccccCcCCCCCcEEEEccccCCCCC-eEEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999998875 99999999
Q ss_pred ccccCcccccccEEEEEEEECCEEEEEecCCcceEEEEeeceeEEEEEEeCCEEEEEEEEecCCCCeEeCCCCCCCcccc
Q 020971 158 LRQLPVLDSFENAAMIGIHYDGILYEFVPWNGVVSWEISQWGYWYFAAENQTHMVELKATTKYPGTTLRAPTSEAGLAPA 237 (319)
Q Consensus 158 ~~~Ip~l~~~~~~~ligl~~~Gk~y~F~t~~g~~~~~v~~~g~w~i~~~~~~~~lei~~~~~~~g~~L~AP~~g~gm~~~ 237 (319)
+++||++ .+.++||+||++|++|||+||++.+.++|++|++|+|+++|++|+|+|+++++.+++.|+||+.+ +|++.
T Consensus 222 ~~~i~~~--~e~~~ligi~~~Gk~YrF~p~n~~v~~~V~~~g~w~i~~~n~~~~lei~~~~~~~g~~L~AP~~~-~m~~~ 298 (336)
T PF14249_consen 222 RRPIPGL--TESVGLIGIHYDGKFYRFAPYNSKVSWQVDPWGRWRIRARNRKYELEIEATTDSPGTPLRAPTEG-GMQPR 298 (336)
T ss_pred ccccCcc--ccccEEEEEEECCEEEEEEcccceEEEEEeeCceEEEEEECCCEEEEEEEEECCCCcEEeCcCCC-CCchh
Confidence 9999977 55689999999999999999999999999999999999999999999999997678999999988 89999
Q ss_pred ccccccEEEEEEEEecccCCCCceEEEEEeeCeeEEeEeC
Q 020971 238 CKDTCFGELTLQLWERRYDGTKGKMILDVTSDMAALEVGG 277 (319)
Q Consensus 238 c~ES~~g~v~v~L~~~~~~~~~g~~i~d~~s~~AglEiGG 277 (319)
|+||+.|+++|+|++++ ++++++|++++|++||||+||
T Consensus 299 ~rEsl~g~v~v~L~~~~--~~~g~lI~~~~s~~AGLEvGG 336 (336)
T PF14249_consen 299 CRESLQGRVRVELWEKK--GKKGKLIFDGTSNLAGLEVGG 336 (336)
T ss_pred hhccCcEEEEEEEEECc--CCCCcEEEEeecCcEEEeecC
Confidence 99999999999999954 556899999999999999998
No 3
>PF07143 CrtC: Hydroxyneurosporene synthase (CrtC); InterPro: IPR010791 This family consists of several purple photosynthetic bacterial hydroxyneurosporene synthase (CrtC) proteins. The enzyme catalyses the conversion of various acyclic carotenes including 1-hydroxy derivatives. This broad substrate specificity reflects the participation of CrtC in 1'-HO-spheroidene and in spirilloxanthin biosynthesis [].; GO: 0016491 oxidoreductase activity, 0015979 photosynthesis, 0015995 chlorophyll biosynthetic process, 0016117 carotenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2ICH_B.
Probab=96.68 E-value=0.011 Score=56.62 Aligned_cols=57 Identities=18% Similarity=0.408 Sum_probs=42.6
Q ss_pred EEecCceeEEEEEECCEEEEecCCcccccCCCCCCC--CC--CcEEEEeccCCCCCCceEEEEc
Q 020971 96 ICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAF--PR--KWFWVQCNVFEGATGEVALTAG 155 (319)
Q Consensus 96 V~~~h~~asG~I~~nG~~~~f~~g~gY~EKNWG~sF--P~--~w~W~Q~n~F~~~~~~~slt~a 155 (319)
-.+-+..++|+|+++|+.+.++ +.||.+||||... +. .|-|.+.. +++.. ++++...
T Consensus 144 ws~P~~~v~Gtl~i~g~~~~V~-G~aw~Dh~WG~~~l~~~~~gW~W~~l~-l~dg~-~l~~y~~ 204 (312)
T PF07143_consen 144 WSAPRLRVSGTLTIDGKTIQVT-GTAWFDHQWGSFPLAPGQSGWDWFRLQ-LDDGR-ELMLYQL 204 (312)
T ss_dssp EEEEEEEEEEEEEETTEEEEEE-EEEEEEEEEESS-S-TTEEEEEEEEEE-ETTS--EEEEEEE
T ss_pred EccccEEEEEEEEECCEEEEEe-eeEEEEEcccCccCccCCCccEEEEEE-CCCCC-EEEEEEE
Confidence 3377777899999999999998 8999999999854 23 49999996 44432 2555444
No 4
>PF10974 DUF2804: Protein of unknown function (DUF2804); InterPro: IPR021243 This is a family of proteins with unknown function.
Probab=94.56 E-value=0.4 Score=46.83 Aligned_cols=110 Identities=15% Similarity=0.357 Sum_probs=78.2
Q ss_pred cCceeEEEEEECCEEEEecCCcccccCCCCCC---CCCCcEEEEeccCCC-CCCceEEEEcccccccCcccccccEEEEE
Q 020971 99 AGGLSTGWIEWDGERFEFQDAPSYSEKNWGGA---FPRKWFWVQCNVFEG-ATGEVALTAGGGLRQLPVLDSFENAAMIG 174 (319)
Q Consensus 99 ~h~~asG~I~~nG~~~~f~~g~gY~EKNWG~s---FP~~w~W~Q~n~F~~-~~~~~slt~aGG~~~Ip~l~~~~~~~lig 174 (319)
..-.++|+|.++|++|+|+...++.=-|||+. +-..|.|.-++...+ .. .+.|-++.|... +- ..-| -+
T Consensus 169 ~~~pv~G~v~~g~~~~~~~~~~~~a~lD~~rG~~~~~t~W~Was~sg~~~dG~-~iG~NL~~g~~d-~t-~~tE----N~ 241 (333)
T PF10974_consen 169 NGLPVSGSVRLGGKEYSFDPENAFAVLDWGRGYWPRETFWNWASASGRLDDGR-RIGFNLGAGFND-GT-GATE----NA 241 (333)
T ss_pred cCcceEEEEEECCEEEecCCCCcEEEEEcCCCccCCcCeEEEEEEEEECCCCC-EEEEEeeccccc-CC-CCcc----eE
Confidence 34456999999999999997778888889875 456799999888764 22 378888877544 21 1233 45
Q ss_pred EEECCEEEEEecCCcceEEEEee---ceeEEEEEEeCCEEEEEEEEec
Q 020971 175 IHYDGILYEFVPWNGVVSWEISQ---WGYWYFAAENQTHMVELKATTK 219 (319)
Q Consensus 175 l~~~Gk~y~F~t~~g~~~~~v~~---~g~w~i~~~~~~~~lei~~~~~ 219 (319)
|.++|+.+++ ..++++++. -..|+|+-.++...|+.+-..+
T Consensus 242 l~~dG~~~kL----~~V~f~~~~~~~~~pW~i~s~dg~vdL~FtP~~~ 285 (333)
T PF10974_consen 242 LWVDGKLHKL----PPVRFEYDREDPMKPWRITSDDGRVDLTFTPIFD 285 (333)
T ss_pred EEECCEEEEC----CcEEEEecCcCCCCCeEEEcCCCeEEEEEEEeee
Confidence 7899999888 345666653 2469999887777666654443
No 5
>PF10974 DUF2804: Protein of unknown function (DUF2804); InterPro: IPR021243 This is a family of proteins with unknown function.
Probab=44.25 E-value=1.6e+02 Score=28.62 Aligned_cols=80 Identities=16% Similarity=0.188 Sum_probs=52.0
Q ss_pred eeEEEE----EEeCCEEEEEEEEec--CCCCeEeCCCCCCCcccccc-ccccEEEEEEEEecccCCCCceEEEEEeeCee
Q 020971 199 GYWYFA----AENQTHMVELKATTK--YPGTTLRAPTSEAGLAPACK-DTCFGELTLQLWERRYDGTKGKMILDVTSDMA 271 (319)
Q Consensus 199 g~w~i~----~~~~~~~lei~~~~~--~~g~~L~AP~~g~gm~~~c~-ES~~g~v~v~L~~~~~~~~~g~~i~d~~s~~A 271 (319)
+.++|. ...+.+.+++++... .+.+.+..|....+.....+ .++.++.+|++-.+ +..++.....|
T Consensus 121 ~~~~l~~~~~~~~~~l~~~~~l~~~~~~e~L~vv~P~~~~~f~yt~K~~~~pv~G~v~~g~~-------~~~~~~~~~~a 193 (333)
T PF10974_consen 121 GGRRLDVDLFGKGPGLEADLELDRPPGHEPLNVVTPWGENRFYYTQKQNGLPVSGSVRLGGK-------EYSFDPENAFA 193 (333)
T ss_pred CeEEEEEEccCCCCCEEEEEEEeCCCCCCCEEEEeecCCCCEEEEEEecCcceEEEEEECCE-------EEecCCCCcEE
Confidence 566666 567788888888753 13367789986634333444 35567777766321 34466667889
Q ss_pred EEeEeCCccc--cccc
Q 020971 272 ALEVGGGPWF--NTWK 285 (319)
Q Consensus 272 glEiGG~~w~--~~w~ 285 (319)
.|.+|.+.|. ..|.
T Consensus 194 ~lD~~rG~~~~~t~W~ 209 (333)
T PF10974_consen 194 VLDWGRGYWPRETFWN 209 (333)
T ss_pred EEEcCCCccCCcCeEE
Confidence 9999998874 4555
No 6
>PF08043 Xin: Xin repeat; InterPro: IPR012510 The repeat has the consensus sequence GDV(K/Q/R)(T/S/G)X(R/K/T) WLFETXPLD. This repeat motif is typically found in the N terminus of the proteins, with a copy number between 2 and 28 repeats. Direct evidence for binding to and stabilising F-actin has been found in the human protein (Q702N9 from SWISSPROT) []. The homologues in mouse and chicken localise in the adherens junction complex of the intercalated disc in cardiac muscle and in the myotendon junction of skeletal muscle. mXin may co-localise with Vinculin which is known to attach the actin to the cytoplasmic membrane []. It has been shown that the amino-terminus of human xin (CMYA1) binds the EVH1 domain of Mena/VASP/EVL, and the carboxy-terminus binds the, for the filamin family unique, domain 20 of filamin C []. This confirms the proposed role of xin repeat containing proteins as F-actin-binding adapter proteins.; GO: 0003779 actin binding, 0030036 actin cytoskeleton organization, 0030054 cell junction
Probab=27.56 E-value=37 Score=18.98 Aligned_cols=14 Identities=43% Similarity=1.035 Sum_probs=12.0
Q ss_pred ccccceeEEEEeec
Q 020971 54 TVKSARWEYSTRPV 67 (319)
Q Consensus 54 ~~~~~~W~~~i~p~ 67 (319)
+|++++|-++.+|.
T Consensus 2 DV~~~~wlFEtqpl 15 (16)
T PF08043_consen 2 DVKTTRWLFETQPL 15 (16)
T ss_pred CcceeEEEeecccC
Confidence 57888999999985
No 7
>COG0016 PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis]
Probab=24.53 E-value=52 Score=32.63 Aligned_cols=31 Identities=26% Similarity=0.368 Sum_probs=26.8
Q ss_pred cccCCCCCcceEEEecCceeEEEEEECCEEE
Q 020971 84 LAAFPVFEPHWQICMAGGLSTGWIEWDGERF 114 (319)
Q Consensus 84 f~~lP~~e~hw~V~~~h~~asG~I~~nG~~~ 114 (319)
-+|+||=||-+.|-..|....|||++-|--+
T Consensus 254 psyFPFTEPS~Evdv~~~~~~~WlEi~G~Gm 284 (335)
T COG0016 254 PSYFPFTEPSAEVDVYCPGCGGWLEILGCGM 284 (335)
T ss_pred cCCCCCCCCeEEEEEEEcCCCCEEEEecccc
Confidence 4789999999999999988788999988433
No 8
>PF07806 Nod_GRP: Nodule-specific GRP repeat; InterPro: IPR012488 The region featured in this family is found repeated in a number of plant proteins, some of which are expressed specifically in nodules formed during symbiotic interactions with certain bacterial species]. Some of these proteins are also termed glycine-rich proteins (GRPs), due to the presence of a glycine-rich C-terminal region in their structures []. Bacterial infection is required for the induction of nodule-specific GRP genes, and it is thought that nodule-specific GRPs may play non-redundant roles required at specific stages of nodule development []. Members of this group of proteins may be cytosolic, whereas others are thought to be membrane-associated [].
Probab=18.78 E-value=53 Score=22.36 Aligned_cols=9 Identities=44% Similarity=1.272 Sum_probs=7.5
Q ss_pred CCCCCCCCC
Q 020971 125 KNWGGAFPR 133 (319)
Q Consensus 125 KNWG~sFP~ 133 (319)
.|||.||+.
T Consensus 16 RDWgGsfw~ 24 (38)
T PF07806_consen 16 RDWGGSFWG 24 (38)
T ss_pred eeccCcCcc
Confidence 589999975
No 9
>PF05720 Dicty_CAD: Cell-cell adhesion domain; InterPro: IPR008601 This family is based on a group of Dictyostelium discoideum (Slime mould) proteins that are essential in early development []. P16642 from SWISSPROT and P16643 from SWISSPROT are located on the cell surface and mediate cell-cell adhesion.; GO: 0007155 cell adhesion
Probab=16.12 E-value=1.4e+02 Score=23.76 Aligned_cols=21 Identities=24% Similarity=0.433 Sum_probs=17.0
Q ss_pred EEEEEECCEEEEecCCccccc
Q 020971 104 TGWIEWDGERFEFQDAPSYSE 124 (319)
Q Consensus 104 sG~I~~nG~~~~f~~g~gY~E 124 (319)
||.|+.||+.|+.-.+.+..-
T Consensus 50 S~kiE~~Gq~ydiPss~~~~~ 70 (82)
T PF05720_consen 50 SGKIERNGQEYDIPSSRGSSW 70 (82)
T ss_pred eeeEEECCEEeeCCcccCcee
Confidence 999999999999976665443
No 10
>COG5620 Uncharacterized conserved protein [Function unknown]
Probab=14.95 E-value=1.3e+02 Score=27.37 Aligned_cols=65 Identities=15% Similarity=0.255 Sum_probs=42.8
Q ss_pred ccccCCCCCCCCCCcEEEEe-ccCCCCCCceEEEEcccccccCcc-cccccEEEEEEEECCEEEEEecCCcce
Q 020971 121 SYSEKNWGGAFPRKWFWVQC-NVFEGATGEVALTAGGGLRQLPVL-DSFENAAMIGIHYDGILYEFVPWNGVV 191 (319)
Q Consensus 121 gY~EKNWG~sFP~~w~W~Q~-n~F~~~~~~~slt~aGG~~~Ip~l-~~~~~~~ligl~~~Gk~y~F~t~~g~~ 191 (319)
-.+||-|| |.-+.++|+|- ..|+.--. +....++.+.||+. ..| .=+.++.+++.++.+-|+|-.
T Consensus 49 ~W~e~Gfg-s~~dg~~wi~~P~~f~pVIe--~~~~~~a~~sV~i~~~aF---Gdii~W~~~~ti~in~~kg~~ 115 (200)
T COG5620 49 FWIEKGFG-SWSDGQYWICDPSIFQPVIE--MSYFRDATVSVPIGYTAF---GDIITWEGNATIRINLYKGGV 115 (200)
T ss_pred HHHhcccc-eeccceEEecCccccchhHH--HhhccCCceEEEEEEecc---CcEEEecCCceEEEEecCCcc
Confidence 56788887 68899999986 45654321 22234456667766 333 234478888888888777653
Done!