Query 020972
Match_columns 319
No_of_seqs 244 out of 1216
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 10:53:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020972.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020972hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zc6_A Probable N-acetylglucos 100.0 5.6E-42 1.9E-46 317.4 32.4 261 22-316 11-274 (305)
2 2ch5_A NAGK protein; transfera 100.0 2E-39 6.7E-44 304.9 34.5 276 22-316 6-288 (347)
3 1zbs_A Hypothetical protein PG 100.0 1.2E-39 4E-44 300.0 27.6 256 23-316 1-258 (291)
4 2e2o_A Hexokinase; acetate and 100.0 7.8E-39 2.7E-43 295.1 32.7 259 20-316 1-261 (299)
5 1zxo_A Conserved hypothetical 100.0 4.3E-40 1.5E-44 303.0 13.9 248 23-316 1-252 (291)
6 2qm1_A Glucokinase; alpha-beta 100.0 5.5E-38 1.9E-42 292.4 16.1 261 17-316 1-285 (326)
7 3vgl_A Glucokinase; ROK family 100.0 1.2E-35 4.1E-40 276.9 14.7 238 22-316 2-275 (321)
8 1z05_A Transcriptional regulat 100.0 1.2E-34 3.9E-39 280.4 18.0 247 18-316 104-380 (429)
9 3r8e_A Hypothetical sugar kina 100.0 2.1E-34 7.2E-39 268.5 18.8 246 18-317 15-284 (321)
10 4db3_A Glcnac kinase, N-acetyl 100.0 9.3E-35 3.2E-39 271.6 15.3 245 23-316 25-291 (327)
11 2hoe_A N-acetylglucosamine kin 100.0 1.7E-34 5.9E-39 275.1 15.0 240 18-316 83-337 (380)
12 3vov_A Glucokinase, hexokinase 100.0 2.1E-34 7.2E-39 266.4 15.2 242 23-316 2-261 (302)
13 1z6r_A MLC protein; transcript 100.0 2.2E-34 7.5E-39 276.5 14.0 247 18-316 81-357 (406)
14 4htl_A Beta-glucoside kinase; 100.0 7.4E-34 2.5E-38 262.1 16.7 230 23-316 5-259 (297)
15 2ap1_A Putative regulator prot 100.0 2.9E-33 9.8E-38 261.2 16.0 246 22-316 24-291 (327)
16 3htv_A D-allose kinase, alloki 100.0 2.2E-33 7.4E-38 260.6 14.0 240 18-315 3-261 (310)
17 2yhw_A Bifunctional UDP-N-acet 100.0 4.3E-33 1.5E-37 261.7 15.4 242 21-303 29-295 (343)
18 2aa4_A Mannac kinase, putative 100.0 3.3E-33 1.1E-37 256.1 13.0 230 23-316 2-255 (289)
19 2gup_A ROK family protein; sug 100.0 1.4E-31 4.9E-36 245.7 19.5 224 23-316 5-249 (292)
20 3mcp_A Glucokinase; structural 100.0 1.9E-31 6.4E-36 252.4 15.9 233 18-317 5-282 (366)
21 3epq_A Putative fructokinase; 100.0 1.5E-29 5.2E-34 233.8 19.4 218 22-316 3-246 (302)
22 1sz2_A Glucokinase, glucose ki 100.0 9.5E-29 3.2E-33 231.3 23.8 240 20-311 12-284 (332)
23 2q2r_A Glucokinase 1, putative 100.0 1.5E-29 5.2E-34 240.3 15.3 249 22-316 29-329 (373)
24 1saz_A Probable butyrate kinas 100.0 9.2E-29 3.1E-33 235.6 11.7 242 22-316 2-318 (381)
25 1woq_A Inorganic polyphosphate 99.9 1.1E-26 3.6E-31 210.9 14.5 204 22-314 12-235 (267)
26 3lm2_A Putative kinase; struct 99.9 2.5E-27 8.6E-32 209.7 9.9 190 19-316 3-205 (226)
27 1bdg_A Hexokinase; phosphotran 99.9 6.1E-22 2.1E-26 191.8 21.2 265 20-316 66-415 (451)
28 2yhx_A Hexokinase B; transfera 99.9 2.2E-22 7.4E-27 195.0 17.6 264 17-316 56-405 (457)
29 1cza_N Hexokinase type I; stru 99.9 1.1E-21 3.8E-26 204.8 20.6 272 18-316 74-429 (917)
30 1cza_N Hexokinase type I; stru 99.8 5.7E-18 2E-22 176.9 18.2 277 17-316 521-877 (917)
31 3o8m_A Hexokinase; rnaseh-like 99.5 9.3E-13 3.2E-17 127.9 22.5 133 19-164 77-241 (485)
32 3hm8_A Hexokinase-3; glucose, 98.9 2.1E-07 7.3E-12 89.1 23.8 136 17-163 54-216 (445)
33 1hux_A Activator of (R)-2-hydr 98.8 9.5E-07 3.3E-11 79.6 21.3 115 22-168 3-118 (270)
34 3f9m_A Glucokinase; hexokinase 98.7 4.8E-06 1.6E-10 80.3 25.3 146 20-177 75-265 (470)
35 3ifr_A Carbohydrate kinase, FG 98.6 5.5E-08 1.9E-12 95.5 8.9 80 16-104 1-86 (508)
36 3g25_A Glycerol kinase; IDP007 98.6 1.9E-07 6.5E-12 91.5 10.7 78 18-104 2-85 (501)
37 4e1j_A Glycerol kinase; struct 98.6 2.1E-07 7.1E-12 91.7 10.9 76 20-104 24-105 (520)
38 2zf5_O Glycerol kinase; hypert 98.5 3.4E-07 1.2E-11 89.5 10.6 76 20-104 1-82 (497)
39 4ehu_A Activator of 2-hydroxyi 98.5 5.2E-05 1.8E-09 68.0 22.7 113 23-168 2-116 (276)
40 2w40_A Glycerol kinase, putati 98.4 4.8E-07 1.7E-11 88.6 9.3 76 20-104 2-85 (503)
41 2p3r_A Glycerol kinase; glycer 98.4 8.1E-07 2.8E-11 87.2 10.7 75 21-104 2-82 (510)
42 4ijn_A Acetate kinase, acetoki 98.4 0.00022 7.6E-09 66.9 26.2 250 18-317 20-347 (398)
43 3bex_A Type III pantothenate k 98.4 3.1E-06 1.1E-10 75.4 13.0 127 20-169 1-144 (249)
44 3h3n_X Glycerol kinase; ATP-bi 98.4 1.1E-06 3.6E-11 86.3 10.7 75 21-104 4-84 (506)
45 2dpn_A Glycerol kinase; thermu 98.4 7.6E-07 2.6E-11 87.0 9.6 74 22-104 2-81 (495)
46 3hz6_A Xylulokinase; xylulose, 98.4 1.4E-06 4.9E-11 85.4 10.3 75 20-104 3-83 (511)
47 2d4w_A Glycerol kinase; alpha 98.3 1.9E-06 6.6E-11 84.3 10.7 74 22-104 2-81 (504)
48 3l0q_A Xylulose kinase; xlylul 98.3 2.1E-06 7.2E-11 85.0 9.9 73 21-102 4-82 (554)
49 3djc_A Type III pantothenate k 98.3 3E-05 1E-09 69.6 15.7 125 23-168 3-147 (266)
50 3ezw_A Glycerol kinase; glycer 98.2 3.2E-06 1.1E-10 83.2 10.1 75 21-104 3-83 (526)
51 3h6e_A Carbohydrate kinase, FG 98.2 3E-06 1E-10 82.5 7.8 72 18-104 2-78 (482)
52 2itm_A Xylulose kinase, xylulo 98.1 6.5E-06 2.2E-10 80.1 9.4 71 23-104 1-77 (484)
53 3ll3_A Gluconate kinase; xylul 98.1 8.6E-06 2.9E-10 79.8 10.2 71 22-104 4-80 (504)
54 3h1q_A Ethanolamine utilizatio 98.1 0.0012 4.1E-08 58.6 22.8 134 21-170 27-163 (272)
55 3jvp_A Ribulokinase; PSI-II, N 98.1 9.4E-06 3.2E-10 80.7 8.9 76 21-104 4-96 (572)
56 3r9p_A ACKA; ssgcid, seattle s 97.9 0.0072 2.5E-07 56.5 24.8 247 23-317 13-338 (391)
57 3i8b_A Xylulose kinase; strain 97.9 3.6E-05 1.2E-09 75.6 9.7 70 21-104 4-74 (515)
58 2uyt_A Rhamnulokinase; rhamnos 97.7 3.6E-05 1.2E-09 74.9 6.3 73 22-107 4-90 (489)
59 2h3g_X Biosynthetic protein; p 97.6 0.0017 6E-08 58.1 15.5 124 23-168 1-145 (268)
60 4bc3_A Xylulose kinase; transf 97.6 9.2E-05 3.1E-09 73.0 7.1 75 18-103 7-99 (538)
61 2ivn_A O-sialoglycoprotein end 97.2 0.14 4.8E-06 46.9 26.3 120 23-154 2-130 (330)
62 3en9_A Glycoprotease, O-sialog 96.3 0.91 3.1E-05 44.2 27.3 102 22-136 6-114 (540)
63 3eno_A Putative O-sialoglycopr 95.9 0.99 3.4E-05 41.3 26.3 134 23-170 7-151 (334)
64 3sk3_A Acetate kinase, acetoki 95.8 0.12 4.2E-06 48.7 13.1 142 146-317 219-363 (415)
65 2f9w_A Pantothenate kinase; CO 95.7 0.25 8.5E-06 44.0 13.9 121 19-169 20-161 (271)
66 1nu0_A Hypothetical protein YQ 95.5 0.052 1.8E-06 43.4 8.2 91 20-135 1-98 (138)
67 2ews_A Pantothenate kinase; PA 95.3 1.5 5.3E-05 39.2 21.3 106 22-170 20-133 (287)
68 3zyy_X Iron-sulfur cluster bin 94.9 0.058 2E-06 53.7 7.9 83 7-100 192-295 (631)
69 1vhx_A Putative holliday junct 94.5 0.079 2.7E-06 43.0 6.6 94 23-140 4-105 (150)
70 1iv0_A Hypothetical protein; r 94.5 0.76 2.6E-05 34.3 11.6 81 24-132 3-92 (98)
71 1g99_A Acetate kinase; alpha/b 94.5 0.71 2.4E-05 43.4 13.8 137 146-317 202-346 (408)
72 4a2a_A Cell division protein F 94.5 0.13 4.4E-06 48.8 9.0 75 21-105 7-86 (419)
73 2iir_A Acetate kinase; transfe 94.3 0.82 2.8E-05 42.9 13.9 137 146-317 201-346 (403)
74 2e1z_A Propionate kinase; TDCD 94.3 0.62 2.1E-05 43.9 12.9 64 240-317 291-354 (415)
75 3khy_A Propionate kinase; csgi 94.0 1 3.4E-05 41.9 13.5 62 241-316 275-336 (384)
76 4h0o_A Acetate kinase; askha ( 93.9 0.83 2.8E-05 42.7 12.8 64 240-317 284-350 (404)
77 3cet_A Conserved archaeal prot 93.3 0.19 6.3E-06 46.1 7.2 81 23-128 1-87 (334)
78 1t6c_A Exopolyphosphatase; alp 92.7 1.4 4.8E-05 39.9 12.4 135 18-169 9-161 (315)
79 2ych_A Competence protein PILM 92.4 1 3.6E-05 41.3 11.3 45 126-170 166-215 (377)
80 3bzc_A TEX; helix-turn-helix, 92.3 1.5 5.1E-05 44.8 13.1 98 22-139 329-427 (785)
81 2fxu_A Alpha-actin-1, actin, a 92.3 3.9 0.00013 37.6 15.1 91 76-170 81-172 (375)
82 3r6m_A YEAZ, resuscitation pro 92.1 3.7 0.00013 35.0 13.6 96 23-139 3-101 (213)
83 2a6a_A Hypothetical protein TM 90.9 5.2 0.00018 34.1 13.3 97 22-139 12-111 (218)
84 1jce_A ROD shape-determining p 90.4 9.7 0.00033 34.2 16.9 73 96-170 96-171 (344)
85 1k8k_A ARP3, actin-like protei 90.4 4.3 0.00015 37.8 13.4 91 77-170 89-187 (418)
86 4gni_A Putative heat shock pro 88.9 9.6 0.00033 35.2 14.6 67 94-162 149-221 (409)
87 3mdq_A Exopolyphosphatase; str 88.8 4.9 0.00017 36.2 12.1 135 20-169 2-154 (315)
88 3t69_A Putative 2-dehydro-3-de 88.2 0.74 2.5E-05 42.1 6.0 35 18-61 3-37 (330)
89 1nbw_A Glycerol dehydratase re 87.6 1.1 3.8E-05 43.8 7.1 60 22-91 2-63 (607)
90 1u6z_A Exopolyphosphatase; alp 87.5 10 0.00035 36.6 14.1 134 23-168 12-159 (513)
91 2d0o_A DIOL dehydratase-reacti 87.1 1.5 5.2E-05 42.8 7.7 66 22-96 2-69 (610)
92 3psf_A Transcription elongatio 86.6 3.4 0.00012 43.4 10.6 98 22-140 519-629 (1030)
93 2gel_A Putative GRAM negative 86.1 3.7 0.00013 35.3 9.1 96 23-139 2-100 (231)
94 3qfu_A 78 kDa glucose-regulate 85.7 20 0.00069 32.5 14.6 90 69-163 129-223 (394)
95 3psi_A Transcription elongatio 85.2 4.3 0.00015 43.4 10.7 98 22-140 516-626 (1219)
96 3cer_A Possible exopolyphospha 84.8 10 0.00034 34.6 11.9 132 21-165 15-165 (343)
97 3i33_A Heat shock-related 70 k 82.8 28 0.00096 31.8 14.4 90 69-163 134-231 (404)
98 2v7y_A Chaperone protein DNAK; 81.0 24 0.00081 33.8 13.5 90 69-163 85-178 (509)
99 4b9q_A Chaperone protein DNAK; 80.4 29 0.001 34.0 14.1 89 69-162 111-204 (605)
100 3nuw_A 2-OXO-3-deoxygalactonat 77.9 5.2 0.00018 35.8 7.0 34 18-61 2-35 (295)
101 1dkg_D Molecular chaperone DNA 77.3 8.6 0.00029 35.1 8.7 69 94-164 134-206 (383)
102 3hi0_A Putative exopolyphospha 76.7 28 0.00095 33.5 12.4 134 22-168 15-162 (508)
103 4ep4_A Crossover junction endo 74.8 15 0.0005 29.9 8.4 56 23-89 2-63 (166)
104 3d2f_A Heat shock protein homo 73.9 69 0.0023 31.9 14.8 95 69-168 114-221 (675)
105 1hjr_A Holliday junction resol 73.5 6.9 0.00024 31.6 6.1 55 23-89 2-59 (158)
106 2kho_A Heat shock protein 70; 68.8 35 0.0012 33.5 11.2 90 69-163 111-205 (605)
107 4h0p_A Acetate kinase; askha ( 61.5 10 0.00035 35.8 5.3 66 241-317 302-376 (438)
108 4fo0_A Actin-related protein 8 60.5 77 0.0026 30.6 11.8 97 70-169 170-269 (593)
109 3dwl_A Actin-related protein 3 57.4 87 0.003 29.2 11.2 93 76-170 104-203 (427)
110 1k8k_B ARP2, actin-like protei 54.2 4.8 0.00016 37.3 1.8 69 98-170 107-176 (394)
111 2yhw_A Bifunctional UDP-N-acet 54.2 0.41 1.4E-05 43.7 -5.6 13 23-35 43-55 (343)
112 4am6_A Actin-like protein ARP8 53.2 1.2E+02 0.004 30.2 11.5 99 69-169 191-293 (655)
113 3aap_A Ectonucleoside triphosp 50.7 1.1E+02 0.0039 27.6 10.5 128 22-162 3-156 (353)
114 3htv_A D-allose kinase, alloki 50.4 4.9 0.00017 35.9 1.1 32 161-192 152-184 (310)
115 3qb0_A Actin-related protein 4 50.1 1.4E+02 0.0047 28.6 11.4 91 76-169 94-185 (498)
116 1xho_A Chorismate mutase; sout 37.5 56 0.0019 25.9 5.2 36 68-103 44-79 (148)
117 2ych_A Competence protein PILM 36.2 1.2E+02 0.0042 27.0 8.4 20 22-41 191-210 (377)
118 1dbf_A Protein (chorismate mut 34.8 64 0.0022 24.9 5.1 36 68-103 15-50 (127)
119 2aa4_A Mannac kinase, putative 34.0 8.9 0.0003 33.5 0.1 6 170-175 167-172 (289)
120 2e1z_A Propionate kinase; TDCD 33.7 1.8E+02 0.0062 27.1 8.9 21 21-41 17-37 (415)
121 3cj1_A Ectonucleoside triphosp 31.3 79 0.0027 29.9 6.3 142 17-165 29-209 (456)
122 1yuw_A Heat shock cognate 71 k 31.3 22 0.00077 34.4 2.5 22 18-40 1-22 (554)
123 1ufy_A Chorismate mutase; shik 30.8 80 0.0027 24.2 5.0 36 68-103 14-50 (122)
124 2zgy_A Plasmid segregation pro 27.0 41 0.0014 29.7 3.3 84 84-168 85-186 (320)
125 3vth_A Hydrogenase maturation 26.6 1.6E+02 0.0055 29.8 7.9 75 71-157 433-511 (761)
126 4db3_A Glcnac kinase, N-acetyl 26.3 4.5 0.00015 36.4 -3.3 20 161-180 166-185 (327)
127 2i7n_A Pantothenate kinase 1; 25.9 39 0.0013 31.0 3.0 18 24-41 5-22 (360)
128 2i7n_A Pantothenate kinase 1; 25.6 3.8E+02 0.013 24.3 11.0 37 253-303 280-316 (360)
129 4apw_A ALP12; actin-like prote 24.8 38 0.0013 30.3 2.6 73 96-169 106-195 (329)
130 3ttc_A HYPF, transcriptional r 24.2 1.3E+02 0.0043 30.0 6.4 75 72-158 337-418 (657)
131 1z6r_A MLC protein; transcript 24.1 9.4 0.00032 35.3 -1.6 13 165-177 253-265 (406)
132 3zx3_A Ectonucleoside triphosp 22.4 2.3E+02 0.0079 26.6 7.7 142 18-163 30-198 (452)
133 2hoe_A N-acetylglucosamine kin 20.9 10 0.00034 34.9 -2.2 32 161-192 232-263 (380)
No 1
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=100.00 E-value=5.6e-42 Score=317.38 Aligned_cols=261 Identities=24% Similarity=0.269 Sum_probs=218.3
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCcccc--ceEE
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAV--RAVC 99 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i--~~Ig 99 (319)
.|+||||+|||+++++++|. +|+++.+.+.++.+.. .+++++++.+.+.+++++++.+.++++| .+||
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~---------~G~il~~~~~~~~~~~-~~~~~~~~~l~~~i~~~l~~~~~~~~~i~~~~ig 80 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHAS---------DGTPLAMAEGGASALS-QGIAKSWQAVLSTLEAAFQQAGLPAAPASACAIG 80 (305)
T ss_dssp CEEEEEEECSSCEEEEEEET---------TCCEEEEEEESCCCGG-GCHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEEEEcCccceEEEEEcC---------CCCEEEEEeCCCCCcc-cCHHHHHHHHHHHHHHHHHhcCCChhhhccceEE
Confidence 49999999999999999999 9999998876554443 5789999999999999999887766676 7999
Q ss_pred EeecCCCCchhHHHHHHHHHhhCC-CCceEEEeCcHHHHHHhhcCCCCCeEEEEECccceeEeEecCCcEEeeCCCCCcc
Q 020972 100 LAVSGVNHPTDQQRILNWLRDIFP-GNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPIL 178 (319)
Q Consensus 100 ig~pG~~~~~~~~~l~~~L~~~~~-~~~pv~v~NDa~aa~~g~~~g~~~~v~v~~GTGigg~gii~dG~~~raGg~Ghl~ 178 (319)
||+||+++++.+.. |++.|+ + .||+|+||+|++++++. +.++++++++|||++|++++.||++.++|||||+.
T Consensus 81 ig~pG~v~~~~~~~----l~~~~~~~-~pv~v~NDa~aaa~ge~-~~~~~v~v~~GTGigg~~i~~~G~~~~aGe~Gh~~ 154 (305)
T 1zc6_A 81 LGLSGVHNRQWAGE----FESQAPGF-ARLSLATDGYTTLLGAH-GGQPGIIVALGTGSIGEALYPDGSHREAGGWGYPS 154 (305)
T ss_dssp EEESCCCTTSHHHH----HHHTCCCC-SEEEEECHHHHHHHHHT-TTSSEEEEEESSSEEEEEECTTSCEEEESCCCTTT
T ss_pred EEecCCCchHHHHH----HHHhCCCC-ceEEEECCHHHHHHhhc-CCCCeEEEEecCCeEEEEEeCCCcEEEecCccccc
Confidence 99999998776543 666773 3 89999999999999874 45799999999999776665699999999999999
Q ss_pred CCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhchhHHHHHHHHcCCHHHHHH
Q 020972 179 GDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEVANKI 258 (319)
Q Consensus 179 gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~v~~~A~~GD~~A~~i 258 (319)
+|+|+++||||+++....+..|++.+.|.+.+++++.++ .+...++++.+.. ....++.+++.|+++| +||+.|+++
T Consensus 155 ~d~g~~~~iG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~-~~~~~~~~~~~v~~~a-~GD~~A~~i 231 (305)
T 1zc6_A 155 GDEASGAWLGQRAAQLTQMALDGRHSHSPLTRAVLDFVG-GDWQAMMAWNGRA-TPAQFARLAPLVLSAA-RVDPEADAL 231 (305)
T ss_dssp SCTTSHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHT-SSHHHHHHHHHTC-CHHHHHTTHHHHHHHT-TTCHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCCCCChHHHHHHHHHC-cCHHHHHHHHhcc-CHHHHHHHHHHHHHHc-CCCHHHHHH
Confidence 999999999999999888888998888999999999886 3567777665532 2234445578899999 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 259 LQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 259 l~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
+++++++|+.+++++++. || ++|||+||++....+.|.+++.+
T Consensus 232 ~~~~~~~L~~~l~~l~~~-~p--------------~~VvlgGgv~~~~~~~l~~~l~~ 274 (305)
T 1zc6_A 232 LRQAGEDAWAIARALDPQ-DE--------------LPVALCGGLGQALRDWLPPGFRQ 274 (305)
T ss_dssp HHHHHHHHHHHHHHHCTT-CC--------------SCEEEESHHHHHTGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC-CC--------------CeEEEECCchHhHHHHHHHHHHh
Confidence 999999999999999987 77 58999999984345556555544
No 2
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=100.00 E-value=2e-39 Score=304.90 Aligned_cols=276 Identities=24% Similarity=0.346 Sum_probs=224.7
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCcc-ccceEEE
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRS-AVRAVCL 100 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~-~i~~Igi 100 (319)
.|+||||+|+|+++++++|. +|+++.+.+.++.+..+.+++++++.+.+.+++++++.+.++. ++.+|||
T Consensus 6 ~~~lgiDiGgt~~~~~l~d~---------~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi 76 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSE---------DGKILAEADGLSTNHWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGL 76 (347)
T ss_dssp CEEEEEEECTTCEEEEEEET---------TSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEE
T ss_pred eEEEEEEcCccceEEEEEeC---------CCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHHhcCCCcccceeEEEE
Confidence 49999999999999999999 9999998887544432247889999999999999988877666 7999999
Q ss_pred eecCCCCchhHHHHHHHHHhhCC--CCceEEEeCcHHHHHHhhcCCCCCeEEEEECccceeEeEecCCcEEeeCCCCCcc
Q 020972 101 AVSGVNHPTDQQRILNWLRDIFP--GNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPIL 178 (319)
Q Consensus 101 g~pG~~~~~~~~~l~~~L~~~~~--~~~pv~v~NDa~aa~~g~~~g~~~~v~v~~GTGigg~gii~dG~~~raGg~Ghl~ 178 (319)
|+||+++++.+.+|++.|++.|+ . .||+|+||+|+++++. .+ ++++++++|||++++.+..+|+..++|+|||+.
T Consensus 77 ~~pG~vd~~~~~~l~~~l~~~~~~~~-~pv~v~NDa~aaa~a~-~~-~~~v~v~~GTGig~~~v~~~G~~c~cG~~G~l~ 153 (347)
T 2ch5_A 77 SLSGGDQEDAGRILIEELRDRFPYLS-ESYLITTDAAGSIATA-TP-DGGVVLISGTGSNCRLINPDGSESGCGGWGHMM 153 (347)
T ss_dssp EETTTTCHHHHHHHHHHHHHHCTTSB-SCEEEEEHHHHHHHHH-CS-SCEEEEEESSSEEEEEECTTSCEEEEECCCTTT
T ss_pred eccCCCchHHHHHHHHHHHHhcCCCC-ceEEEECcHHHHHHhh-CC-CCcEEEEEcCCceeEEEcCCCCEEecCCcCccc
Confidence 99999998888999999999985 2 7999999999999984 44 689999999999776555689999999999999
Q ss_pred CCcCChHHHHHHHHHHHHHHhcCCCC----CchhHHHHHHHcCCCChhhHHHHhccCCChHHHhchhHHHHHHHHcCCHH
Q 020972 179 GDWGSGYGIAAQALTAVIRAYDGRGP----DTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSCAEAGDEV 254 (319)
Q Consensus 179 gd~Gsa~~iG~~~~~~~~~~~dg~~~----~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~v~~~A~~GD~~ 254 (319)
+|++|++++++.++....+..|++.+ .+.+.+.+.+.+++.+..+++.+++.......++.+++.|+++|++||+.
T Consensus 154 ~de~s~~~i~~~~~~~~~~~~dg~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~gD~~ 233 (347)
T 2ch5_A 154 GDEGSAYWIAHQAVKIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGILTHLYRDFDKCRFAGFCRKIAEGAQQGDPL 233 (347)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHTSSCCSSCCHHHHHHHHHHHTCSSHHHHHTTTTTTCCHHHHHTTHHHHHHHHHTTCHH
T ss_pred CCCccHHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHhCCCCHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 99999999999999877777777665 25677777777765555556655543222334444578999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 255 ANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 255 A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
|++++++++++|+.+++++++.+|| +... .+++..|||+||++ ..++.|++++.+
T Consensus 234 a~~il~~~~~~La~~i~~l~~~~~p--~~~~----~~~~~~IvlgGgv~-~~~~~~~~~~~~ 288 (347)
T 2ch5_A 234 SRYIFRKAGEMLGRHIVAVLPEIDP--VLFQ----GKIGLPILCVGSVW-KSWELLKEGFLL 288 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGSCG--GGGC----STTCEEEEEESGGG-GGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc--cccc----cCCCceEEEECCcc-cCcHHHHHHHHH
Confidence 9999999999999999999999998 1000 00012799999998 778888887765
No 3
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=100.00 E-value=1.2e-39 Score=300.03 Aligned_cols=256 Identities=21% Similarity=0.239 Sum_probs=202.1
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
|+||||+|||||+++++| +|+++.+.+.+++++...+++.++++|.+.+++++ +.+..++.+||||+
T Consensus 1 ~~lgiDiGGT~~~~~l~d----------~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~---~~~~~~i~~igig~ 67 (291)
T 1zbs_A 1 MILIGDSGSTKTDWCIAK----------EGKSLGRFQTSGINPFQQDRNEIDTALRSEVLPAI---GQKASSIRAVYFYG 67 (291)
T ss_dssp CEEEEEECSSEEEEEEEE----------TTEEEEEEEEECCCTTTSCHHHHHHHHTTTTHHHH---TTSTTTCCEEEEEE
T ss_pred CEEEEEeCccceEEEEEe----------CCeEEEEEECCCCCcccCCHHHHHHHHHHHHHHHh---CCCcccccEEEEEC
Confidence 479999999999999998 38899888776655532478889999998888754 22335788999999
Q ss_pred cCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCeEEEEECccceeEeEecCCcEEeeCCCCCccCCcC
Q 020972 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGDWG 182 (319)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g~~~~v~v~~GTGigg~gii~dG~~~raGg~Ghl~gd~G 182 (319)
||++ ++...++++.|+++|+...||.|+||+|+|++++. +.++++++++|||+++++++.||+++++|||||+++|+|
T Consensus 68 pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~-g~~~~v~v~~GTGigg~~i~~~G~~~~aGe~G~~~~d~g 145 (291)
T 1zbs_A 68 AGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC-GDSEGIACILGTGSNSCLFDGREIKANVSPLGYILGDEG 145 (291)
T ss_dssp TTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT-TTSCEEEEEESSSEEEEEECSSSEEEECCCCHHHHCCTT
T ss_pred CCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc-CCCCcEEEEecCChheEEECCCCcEEEeCCCccccCCCc
Confidence 9998 66667999999999971039999999999999885 678999999999997678888999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCC-hHHHhchhHHHHHHHHcCCHHHHHHHHH
Q 020972 183 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPS-WARIAALVPVVVSCAEAGDEVANKILQD 261 (319)
Q Consensus 183 sa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~a~~~~~v~~~A~~GD~~A~~il~~ 261 (319)
+++||||++++..++. +. .+++.+.+++.++.. ..+++++.|.... +.+++++++.|++ ++||+.|++++++
T Consensus 146 ~~~~~G~~~~~~~~~~---~~-~~~l~~~~~~~~~~~-~~~l~~~~~~~~~~~~~ia~~a~~v~~--~~GD~~A~~i~~~ 218 (291)
T 1zbs_A 146 SGAVLGRLFIGSLLKG---QM-PEGLCEAFLQEYGLT-SADIIESVYRKPFPNRFLAGFSPFIAQ--HLDIPAVYSLVQN 218 (291)
T ss_dssp SHHHHHHHHHHHHHTT---CS-CTTHHHHHHHHTTCC-HHHHHHHHHHSSCHHHHHHTTHHHHHT--TTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHc---cC-CChHHHHHHHHhCcC-HHHHHHHHHcCCCCHHHHHHhhHHHHH--hCCCHHHHHHHHH
Confidence 9999999998754432 22 678888888888753 5556665543222 2456667888988 8899999999999
Q ss_pred HHHHHHHHHHHHHHHh-cccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 262 SVEELALSVKAVVQRL-SLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 262 a~~~Lg~~la~li~~l-~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
++++|+..+ .++.+ || ++|||+||++....+.+...+.+
T Consensus 219 ~~~~La~~i--~~~~~~~p--------------~~vvlgGGv~~~~~~~l~~~l~~ 258 (291)
T 1zbs_A 219 SFDDFLVRN--VLRYNRPD--------------LPLHFIGSVAFHYREVLSSVIKK 258 (291)
T ss_dssp HHHHHHHHH--TGGGCCTT--------------SCEEEESHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHH--hcccCCCC--------------ceEEEECchHHhhHHHHHHHHHH
Confidence 999999999 34444 54 68999999994323555555444
No 4
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=100.00 E-value=7.8e-39 Score=295.15 Aligned_cols=259 Identities=25% Similarity=0.371 Sum_probs=217.4
Q ss_pred CCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEE
Q 020972 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (319)
Q Consensus 20 m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Ig 99 (319)
|| |+||||+|+|+++++++|. +|+++.+.+.++.+....+++++++.+.+.+++++++. +.+||
T Consensus 1 mM-~~lgiDiGgt~~~~~l~d~---------~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~------~~~ig 64 (299)
T 2e2o_A 1 MM-IIVGVDAGGTKTKAVAYDC---------EGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIAAKGE------ADVVG 64 (299)
T ss_dssp CC-CEEEEEECSSCEEEEEECT---------TSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHHHTSC------CSEEE
T ss_pred Ce-EEEEEEeCCCcEEEEEEcC---------CCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHHHhcC------CCEEE
Confidence 44 8999999999999999999 99999988876544212478899999999998887532 67999
Q ss_pred EeecCCCCch-hHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCeEEEEECccceeEeEecCCcEEeeCCCCCcc
Q 020972 100 LAVSGVNHPT-DQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPIL 178 (319)
Q Consensus 100 ig~pG~~~~~-~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g~~~~v~v~~GTGigg~gii~dG~~~raGg~Ghl~ 178 (319)
||+||+ +.+ ...+|.+.|++ |+ .||+++||+|++++++.+ .++++|+++|||++..|. ..|+..++|||||+.
T Consensus 65 i~~~G~-~~~~~~~~l~~~l~~-~~--~pv~v~ND~~aaa~~e~~-~~~~v~l~~GTG~i~~g~-~~G~~~~aGE~Gh~~ 138 (299)
T 2e2o_A 65 MGVAGL-DSKFDWENFTPLASL-IA--PKVIIQHDGVIALFAETL-GEPGVVVIAGTGSVVEGY-NGKEFLRVGGRGWLL 138 (299)
T ss_dssp EEETTC-CSHHHHHHHHHHHTT-SS--SEEEEEEHHHHHHHHHHT-TSCEEEEEESSSEEEEEE-CSSCEEEEECSCTTT
T ss_pred EEcCCC-CchhHHHHHHHHHHh-CC--CCEEEeCcHHHHHhhccC-CCCeEEEEecCCEEEEEE-cCCeEEecCCcCCCc
Confidence 999999 543 44789999999 97 899999999999999875 578999999999666676 588899999999999
Q ss_pred CCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccC-CChHHHhchhHHHHHHHHcCCHHHHH
Q 020972 179 GDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVD-PSWARIAALVPVVVSCAEAGDEVANK 257 (319)
Q Consensus 179 gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~a~~~~~v~~~A~~GD~~A~~ 257 (319)
+++|++++||+++++...++.|++.+.+.+.+.+.+.++..+...+.++.+.. ..+.+++..++.|++++++||+.|++
T Consensus 139 ~~~g~~c~cG~~gl~~~~~~le~~~s~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~a~~gd~~a~~ 218 (299)
T 2e2o_A 139 SDDGSAYWVGRKALRKVLKMMDGLENKTILYNKVLKTINVKDLDELVMWSYTSSCQIDLVASIAKAVDEAANEGDTVAMD 218 (299)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHTTCCSHHHHHHHHHHHTTCHHHHHTTHHHHHHHHHTTCHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHhCCCCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 99999999999999988888999999999998888887765556666655421 11233344678899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 258 ILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 258 il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
++++++++|+.+++++++.||| +.|||+||++ .+ +.|++++.+
T Consensus 219 il~~~~~~La~~i~~l~~~l~p--------------~~IvlgGgv~-~~-~~~~~~l~~ 261 (299)
T 2e2o_A 219 ILKQGAELLASQAVYLARKIGT--------------NKVYLKGGMF-RS-NIYHKFFTL 261 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC--------------SEEEEESGGG-GS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--------------CEEEEECCcc-Cc-HHHHHHHHH
Confidence 9999999999999999999998 4799999999 56 888888765
No 5
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=100.00 E-value=4.3e-40 Score=302.96 Aligned_cols=248 Identities=21% Similarity=0.248 Sum_probs=185.9
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
|+||||+|||||+++++| +|+++.+.+.+++|+...+++.+++.|.+++++++. ..++.+||+|+
T Consensus 1 ~~lgiDiGGT~i~~~l~d----------~g~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~-----~~~i~~igig~ 65 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL----------NGAVIKRLGTKGINPFFQSEEEIQQKLTASLLPQLP-----EGKFNAVYFYG 65 (291)
T ss_dssp ---CEECCTTCEEEEEEC----------SSSEEEEEEECCCCTTTSCSTTTTTTTTC------------------CEEEC
T ss_pred CEEEEEeccccEEEEEEc----------CCeEEEEEECCCCCcccCCHHHHHHHHHHHHHHhcC-----cccccEEEEEc
Confidence 479999999999999998 388998887766555323667778888888877652 23678999999
Q ss_pred cCCCCchhHHHHHHHHHhhCCCCc--eEEEeCcHHHHHHhhcCCCCCeEEEEECccceeEeEecCCcEEeeCCCCCccCC
Q 020972 103 SGVNHPTDQQRILNWLRDIFPGNV--RLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGD 180 (319)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~~~~~~--pv~v~NDa~aa~~g~~~g~~~~v~v~~GTGigg~gii~dG~~~raGg~Ghl~gd 180 (319)
||++ ++...++++.|++.|+ . ||.|+||+|+|++++. +.++++++++|||++|+|++.||++.++|||||+++|
T Consensus 66 pG~~-~~~~~~l~~~l~~~~~--~~~pv~v~NDa~~aalge~-g~~~~v~v~~GTGi~g~gi~~~G~~~~aGe~Gh~~~d 141 (291)
T 1zxo_A 66 AGCT-PEKAPVLRRAIADSLP--VIGNIKANSDMLAAAHGLC-GQKAGIACILGTGSNSCFYNGKEIVSNISPLGFILGD 141 (291)
T ss_dssp TTCC-TTTTHHHHHHHHHHSC--CCSCCEEECSHHHHHHHTT-TTSCBEEEEESSSEEEEEECSSSEEEECCCCCTTTSC
T ss_pred CCCC-HHHHHHHHHHHHHhcC--CCceEEEECcHHHHHHhhc-CCCCcEEEEeCCChheEEECCCCcEEEeCCCccccCC
Confidence 9998 6556799999999997 4 9999999999999885 6789999999999966689999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCC-ChHHHhchhHHHHHHHHcCCHHHHHHH
Q 020972 181 WGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDP-SWARIAALVPVVVSCAEAGDEVANKIL 259 (319)
Q Consensus 181 ~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~a~~~~~v~~~A~~GD~~A~~il 259 (319)
+|+++|||+++++..+. .+. .+++.+.+.+.++.. ..+++++.|... .+.+++.+++.|++ ++||+.|++++
T Consensus 142 ~g~~~~~G~~~~~~~~~---~~~-~~~l~~~~~~~~~~~-~~~l~~~~~~~~~~~~~ia~~a~~v~~--~~GD~~A~~i~ 214 (291)
T 1zxo_A 142 EGSGAVLGKLLVGDILK---NQL-PATLKEEFLKQFDLT-PPEIIDRVYRQPFPNRFLASLSPFIAQ--HLEEPAIRQLV 214 (291)
T ss_dssp CSSHHHHHHHHHHHGGG---TCS-CSHHHHHHHHHHTCC-HHHHGGGTTTSSCSTTTSSTTTHHHHT--TTTSTTTTHHH
T ss_pred CchHHHHHHHHHHHHHH---ccC-CChHHHHHHHHhCCC-HHHHHHHHhcCCCCHHHHHHhhHHHHH--hCCCHHHHHHH
Confidence 99999999998865432 233 678888888877643 455555444321 11344556788888 88999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-cccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 260 QDSVEELALSVKAVVQRL-SLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 260 ~~a~~~Lg~~la~li~~l-~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
++++++|+..+ . ++.+ || ++|||+||++ .+ |++++.|
T Consensus 215 ~~~~~~La~~i-~-~~~~~~p--------------~~vvlgGGv~-~~---l~~~l~~ 252 (291)
T 1zxo_A 215 MNSFIAFFRRN-V-MQYDYKQ--------------YPVHFIGSIA-YC---YKEILQD 252 (291)
T ss_dssp HHHHHHHHTTT-G-GGSCTTT--------------SCEEECSHHH-HH---THHHHHH
T ss_pred HHHHHHHHHHH-h-cccCCCC--------------ceEEEECcHH-HH---HHHHHHH
Confidence 99999999999 3 4443 44 6999999998 44 6666654
No 6
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=100.00 E-value=5.5e-38 Score=292.42 Aligned_cols=261 Identities=13% Similarity=0.059 Sum_probs=198.6
Q ss_pred ccCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 020972 17 ESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (319)
Q Consensus 17 ~~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (319)
++||+.|+||||+|+|+++++++|. +|+++.+.+.+..+. .+++++++.+.+.+++++++.+.+..++.
T Consensus 1 ~~~m~~~~lgiDiggt~~~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~ 69 (326)
T 2qm1_A 1 SNAMDKKIIGIDLGGTTIKFAILTT---------DGVVQQKWSIETNIL--EDGKHIVPSIIESIRHRIDLYNMKKEDFV 69 (326)
T ss_dssp CCGGGCEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCCT--TTTTTHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCcccEEEEEEECCCEEEEEEECC---------CCCEEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHHHcCCCcccee
Confidence 3688889999999999999999999 999999887755332 46788999999999999998887777899
Q ss_pred eEEEeecCCCCchh------------HH-HHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCeEEEEECccce
Q 020972 97 AVCLAVSGVNHPTD------------QQ-RILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTI 158 (319)
Q Consensus 97 ~Igig~pG~~~~~~------------~~-~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-----~g~~~~v~v~~GTGig 158 (319)
+|||++||+++++. .. +|++.|++.|+ .||+++||+|++++++. .+.++++|+++|||+
T Consensus 70 ~igi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~--~pv~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtGi- 146 (326)
T 2qm1_A 70 GIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALG--IPFALDNDANVAALGERWKGAGENNPDVIFITLGTGV- 146 (326)
T ss_dssp EEEEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-
T ss_pred EEEEecccceeCCCCEEEecCCCCccCCchHHHHHHHHhC--CCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCce-
Confidence 99999999865432 25 88999999997 89999999999999873 356799999999998
Q ss_pred eEeEecCCcEEe-----eCCCCCccCCc-CChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCC
Q 020972 159 AYGFTEDGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDP 232 (319)
Q Consensus 159 g~gii~dG~~~r-----aGg~Ghl~gd~-Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~ 232 (319)
|+|++.||++++ +|||||+..+. |..++||+..+-. ...+...+.+.+.+.+.......++...+...
T Consensus 147 G~giv~~G~l~~G~~g~aGE~Gh~~~~~~g~~c~cG~~gcle------~~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 220 (326)
T 2qm1_A 147 GGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFDCTCGKRGCLE------TVSSATGVVRVARHLSEEFAGDSELKQAIDDG 220 (326)
T ss_dssp EEEEEETTEECCCSSSCTTCGGGSBSCTTSCBCTTSSBCBTH------HHHSHHHHHHHHHHHTTTCCSCCHHHHHHHHT
T ss_pred EEEEEECCEEeecCCCcccccCcEEECCCCCcCCCCCccchH------hhhCHHHHHHHHHHHhhcccccchhhhccccc
Confidence 558999999998 89999998764 3334555432210 00122334444433332211112222222100
Q ss_pred ChHHHhchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHH
Q 020972 233 SWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFL 312 (319)
Q Consensus 233 ~~~~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~ 312 (319)
. ...++.|++++++||+.|.+++++++++|+.+++++++.||| +.|||+||++ ..++.|++
T Consensus 221 --~--~~~~~~v~~~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~p--------------~~IvlgGg~~-~~~~~~~~ 281 (326)
T 2qm1_A 221 --Q--DVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNP--------------DSVVIGGGVS-AAGEFLRS 281 (326)
T ss_dssp --C--CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------SEEEEEESGG-GGTHHHHH
T ss_pred --c--CCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CEEEEcChhh-hchHHHHH
Confidence 0 013678999999999999999999999999999999999998 4799999998 66888888
Q ss_pred HHhh
Q 020972 313 KLIE 316 (319)
Q Consensus 313 ~~~~ 316 (319)
++.+
T Consensus 282 ~l~~ 285 (326)
T 2qm1_A 282 RVEK 285 (326)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 7
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=100.00 E-value=1.2e-35 Score=276.87 Aligned_cols=238 Identities=16% Similarity=0.070 Sum_probs=180.4
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEe
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig 101 (319)
+|+||||+|+|+++++++|. +|+++.+.+.++ + .+++++++.+.+.+++++++ .++.+|||+
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~---------~G~i~~~~~~~~--~--~~~~~~~~~i~~~i~~~~~~-----~~i~gigi~ 63 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDE---------EGRILSTFKVAT--P--PTAEGIVDAICAAVAGASEG-----HDVEAVGIG 63 (321)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TCCBCCCEEEEC--C--SSHHHHHHHHHHHHHHHHTT-----CCEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC---------CCCEEEEEEeeC--C--CCHHHHHHHHHHHHHHHHhh-----cCceEEEEe
Confidence 59999999999999999999 999998877654 2 47899999999999988753 378999999
Q ss_pred ecCCCCchh------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCeEEEEECccceeEeEec
Q 020972 102 VSGVNHPTD------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (319)
Q Consensus 102 ~pG~~~~~~------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-----~g~~~~v~v~~GTGigg~gii~ 164 (319)
+||+++.+. ..+|++.|+++|+ .||+++||+|++++++. ++.++++|+++|||++ +|++.
T Consensus 64 ~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG-~gii~ 140 (321)
T 3vgl_A 64 AAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLG-GGIII 140 (321)
T ss_dssp ESSEECTTSSCEEECSSSCCEEECHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEE-EEEEE
T ss_pred ccccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhC--CCEEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcceE-EEEEE
Confidence 999977542 3589999999997 89999999999999873 4568999999999985 57999
Q ss_pred CCcEEe-----eCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhcc----CCCh-
Q 020972 165 DGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV----DPSW- 234 (319)
Q Consensus 165 dG~~~r-----aGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~----~~~~- 234 (319)
||++++ +|++||+..+. ++..|.|....|++... +...+.+.+.. .+..
T Consensus 141 ~G~l~~G~~g~aGEiGh~~v~~------------------~g~~c~cG~~gclE~~~---S~~al~~~~~~~~~~~~~~~ 199 (321)
T 3vgl_A 141 GNKLRRGRFGVAAEFGHIRVVP------------------DGLLCGCGSQGCWEQYA---SGRALVRYAKQRANATPENA 199 (321)
T ss_dssp TTEECCCTTSCCCCGGGSBSST------------------TCSBCTTSCBSBGGGTS---SHHHHHHHHHHHHHHCGGGC
T ss_pred CCEEecCCCCCCccccceEecC------------------CCCCCCCCCcCcHHHhc---CHHHHHHHHHHHhhcCCcch
Confidence 999987 66666665432 22222222222222221 22223222110 0000
Q ss_pred ---------HHHhchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhh
Q 020972 235 ---------ARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLL 305 (319)
Q Consensus 235 ---------~~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~ 305 (319)
..-....+.|++++++||+.|++++++++++|+.+++++++.||| +.|||+||++ .
T Consensus 200 ~~~~~~~~~~~~~~~~~~i~~~a~~gD~~a~~~~~~~~~~La~~i~~l~~~l~p--------------~~IvlgGgi~-~ 264 (321)
T 3vgl_A 200 AVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDP--------------SAFIVGGGVS-D 264 (321)
T ss_dssp HHHHHTTTSSSTTCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------SEEEEESGGG-G
T ss_pred hhhhhcccCccccCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CEEEEeChhh-c
Confidence 000113578999999999999999999999999999999999998 4799999998 7
Q ss_pred cHHHHHHHHhh
Q 020972 306 SWLVVFLKLIE 316 (319)
Q Consensus 306 ~~~~~~~~~~~ 316 (319)
.++.|++++.+
T Consensus 265 ~~~~l~~~l~~ 275 (321)
T 3vgl_A 265 EGELVLDPIRK 275 (321)
T ss_dssp GTHHHHHHHHH
T ss_pred chHHHHHHHHH
Confidence 88999888765
No 8
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=100.00 E-value=1.2e-34 Score=280.44 Aligned_cols=247 Identities=12% Similarity=0.093 Sum_probs=190.9
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (319)
+|...|+||||+|+|+++++++|. +|+++.+.+.+.. . .+++++++.+.+.+++++++.+.+..++.+
T Consensus 104 ~~~~~~~lGIDiGgt~i~~~l~d~---------~G~il~~~~~~~~-~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~g 171 (429)
T 1z05_A 104 NNLGWQFLSMRLGRGYLTIALHEL---------GGEVLIDTKIDIH-E--IDQDDVLARLLFEIEEFFQTYAAQLDRVTS 171 (429)
T ss_dssp CCTTEEEEEEEEETTEEEEEEEET---------TSCEEEEEEEECC-C--CBHHHHHHHHHHHHHHHHHHTTTTCCEEEE
T ss_pred CCCCCEEEEEEECCCEEEEEEECC---------CCCEEEEEEEcCC-C--CCHHHHHHHHHHHHHHHHHhcCCCcCceEE
Confidence 455679999999999999999999 9999998876542 2 368899999999999999988777778999
Q ss_pred EEEeecCCCCchh------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCeEEEEECccceeE
Q 020972 98 VCLAVSGVNHPTD------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAY 160 (319)
Q Consensus 98 Igig~pG~~~~~~------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-----~g~~~~v~v~~GTGigg~ 160 (319)
|||++||+++++. +.+|++.|+++|+ +||+|+||+|+++++|. ++.++++|+++|||++ +
T Consensus 172 igi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~--~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG-~ 248 (429)
T 1z05_A 172 IAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATG--LPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLG-A 248 (429)
T ss_dssp EEEEESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEE-E
T ss_pred EEEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEE-E
Confidence 9999999976432 2589999999997 89999999999999874 3567999999999995 5
Q ss_pred eEecCCcEEe-----eCCCCCccCCc-CChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhcc----
Q 020972 161 GFTEDGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV---- 230 (319)
Q Consensus 161 gii~dG~~~r-----aGg~Ghl~gd~-Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~---- 230 (319)
|++.||++++ +|||||+..+. |..|+||+ ..|++.+. +...+.+.+..
T Consensus 249 giv~~G~l~~G~~g~AGEiGH~~v~~~g~~c~cG~-------------------~gclE~~~---S~~al~~~~~~~~~~ 306 (429)
T 1z05_A 249 GIVLDGRVLQGRHGNIGELGHIQIDPQGKRCHCGN-------------------YGCLETVA---SSQAIRDQVTARIQA 306 (429)
T ss_dssp EEEETTEECCTTTTCTTBCTTSBCCTTCCBCTTSC-------------------BSBTHHHH---SHHHHHHHHHHHHHT
T ss_pred EEEECCEEeeCCCCcccccCceEEcCCCCCCCCCC-------------------CcchHHHh---CHHHHHHHHHHHhhc
Confidence 8999999987 78888887753 33233332 11222222 22223222210
Q ss_pred CCCh---HHHhchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcH
Q 020972 231 DPSW---ARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSW 307 (319)
Q Consensus 231 ~~~~---~~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~ 307 (319)
.... .......+.|++++++||+.|++++++++++|+.+++++++.||| +.|||+|+++ ..+
T Consensus 307 ~~~~~l~~~~~~~~~~i~~~a~~gD~~a~~il~~~~~~L~~~i~~l~~~ldP--------------~~IvlgG~i~-~~~ 371 (429)
T 1z05_A 307 GEPSCLATVEEISIEDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNP--------------EKILIGGVIN-QAK 371 (429)
T ss_dssp TCCCTTTTCSSCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------SEEEEESGGG-GGH
T ss_pred ccccccccccCCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CEEEEeCccc-cch
Confidence 0000 000113678999999999999999999999999999999999998 4799999998 678
Q ss_pred HHHHHHHhh
Q 020972 308 LVVFLKLIE 316 (319)
Q Consensus 308 ~~~~~~~~~ 316 (319)
+.|++++.+
T Consensus 372 ~~l~~~l~~ 380 (429)
T 1z05_A 372 SILYPSIEQ 380 (429)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888888765
No 9
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=100.00 E-value=2.1e-34 Score=268.48 Aligned_cols=246 Identities=17% Similarity=0.109 Sum_probs=180.9
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (319)
.+...|+||||+|+|+++++++|. +|+++.+.+.+.. . ..+++++++.+.+.++++++ ...++.+
T Consensus 15 ~~~~~~~lgidiggt~i~~~l~d~---------~g~il~~~~~~~~-~-~~~~~~~~~~i~~~i~~~~~----~~~~i~g 79 (321)
T 3r8e_A 15 LYFQGMILGIDVGGTSVKFGLVTP---------EGEIQNATRFMTA-D-WVNGIGFVESMKLEIGNFLK----QYPIVKG 79 (321)
T ss_dssp ----CCEEEEECCSSEEEEEEECT---------TCCEEEEEEEEHH-H-HHTTTCHHHHHHHHHHHHHH----HCTTCCE
T ss_pred hccCcEEEEEEECCCEEEEEEEcC---------CCcEEEEEEEeCC-C-CCCHHHHHHHHHHHHHHHHh----ccCCeeE
Confidence 455679999999999999999999 9999998876432 1 13677889999999998886 2347999
Q ss_pred EEEeecCCCCchh-------------HHHHHHHHHhhC-CCCceEEEeCcHHHHHHhhc-----CCCCCeEEEEECccce
Q 020972 98 VCLAVSGVNHPTD-------------QQRILNWLRDIF-PGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTI 158 (319)
Q Consensus 98 Igig~pG~~~~~~-------------~~~l~~~L~~~~-~~~~pv~v~NDa~aa~~g~~-----~g~~~~v~v~~GTGig 158 (319)
|||++||+++++. +.++++.|+++| + +||+|+||+|+++++|. ++.++++|+++|||++
T Consensus 80 igi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~--~pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG 157 (321)
T 3r8e_A 80 VGIGWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPH--IHFKIENDAKCAALGEYYFGENKRMQTFILLALGTGVG 157 (321)
T ss_dssp EEEEESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTT--SEEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEE
T ss_pred EEEEecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCC--CCEEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCceE
Confidence 9999999977431 258999999999 6 99999999999999873 3568999999999985
Q ss_pred eEeEecCCcEEe-----eCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCC
Q 020972 159 AYGFTEDGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPS 233 (319)
Q Consensus 159 g~gii~dG~~~r-----aGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~ 233 (319)
+|++.||++++ +|||||+. +.+.+++ +...+...+.+.+.+.........+ . ..
T Consensus 158 -~gii~~G~l~~G~~g~aGEiGh~~-~~~~gcl-------------E~~~S~~al~~~~~~~~~~~~~~~~-~-~~---- 216 (321)
T 3r8e_A 158 -SGVMMNGKLFIGGRGNGTEVGHML-TTRGKSL-------------ENQVGINHLIAYTHEQLALDVAKKS-S-LH---- 216 (321)
T ss_dssp -EEEEETTEECCCTTSCCCCGGGCB-CTTSSBS-------------HHHHSHHHHHHHHHHHHHHCTTCCC-S-GG----
T ss_pred -EEEEECCEEecCCCCCCccccccc-CCCCCcH-------------HHhcCHHHHHHHHHHHhhccCcccc-c-cc----
Confidence 57999999998 88999988 6541110 0000111222222111100000000 0 00
Q ss_pred hHHHhchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHH
Q 020972 234 WARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLK 313 (319)
Q Consensus 234 ~~~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~ 313 (319)
.......+.|++++++||+.|++++++++++|+.+++++++.||| +.|||+|+++ +.++.|+++
T Consensus 217 -~~~~~~~~~i~~~a~~gD~~a~~~~~~~~~~La~~i~~l~~~ldP--------------~~IvlgG~i~-~~~~~l~~~ 280 (321)
T 3r8e_A 217 -TIAELSPKVIADHAAQGDALALAVWADIGTIIGESLVNIVRVMDL--------------NNILLGGGIS-GAFDYFVPN 280 (321)
T ss_dssp -GCSSCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CEEEEESGGG-GGHHHHHHH
T ss_pred -ccccCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CEEEEeChhc-ccchHHHHH
Confidence 000113578999999999999999999999999999999999998 4899999998 889999988
Q ss_pred Hhhc
Q 020972 314 LIEG 317 (319)
Q Consensus 314 ~~~~ 317 (319)
+.+.
T Consensus 281 l~~~ 284 (321)
T 3r8e_A 281 LKKA 284 (321)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8763
No 10
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=100.00 E-value=9.3e-35 Score=271.63 Aligned_cols=245 Identities=16% Similarity=0.038 Sum_probs=184.4
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
|+||||+|+|+++++++|. +|+++.+.+.++.+ .+++++++.|.+.++++..+.+ .+.+|||++
T Consensus 25 ~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~----~~~gigi~~ 88 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE---------KLERVATERVPTPT---DDYPLLLETIAGLVAKYDQEFA----CEGKIGLGL 88 (327)
T ss_dssp CEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCT---TCHHHHHHHHHHHHHHHHHHHT----SCCEEEEEE
T ss_pred EEEEEEECCCEEEEEEEeC---------CCcEEEEEEecCCC---CCHHHHHHHHHHHHHHHHHhcC----CccEEEEEe
Confidence 7999999999999999999 99999988875432 3788999999999999887653 478999999
Q ss_pred cCCCCch------------hHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCeEEEEECccceeEeEecC
Q 020972 103 SGVNHPT------------DQQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTED 165 (319)
Q Consensus 103 pG~~~~~------------~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-----~g~~~~v~v~~GTGigg~gii~d 165 (319)
||+++++ .+.+|++.|+++|+ .||+|+||+|+++++|. ++.++++|+++|||+| +|++.|
T Consensus 89 pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~--~pV~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtGiG-~gii~~ 165 (327)
T 4db3_A 89 PGMEDADDATVLTVNVPAAKGKPLRADLEAKIG--RSVKIENDANCFALSEAWDEELQDAPSVMGLILGTGFG-GGLIYE 165 (327)
T ss_dssp SEEECTTTCCEEESSSGGGTTSCHHHHHHHHHS--SCCEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSSEE-EEEEET
T ss_pred eccEeCCCCEEEcCCCccccCCCHHHHHHHHHC--CCEEEecchhHHHHHHHHhCCCCCCCcEEEEEeCccce-EEEEEC
Confidence 9998753 23589999999997 89999999999999874 3467899999999995 579999
Q ss_pred CcEEeeCCCCCccCCcCChHHHHHHHHHHHHH-----HhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhch
Q 020972 166 GRDARAAGAGPILGDWGSGYGIAAQALTAVIR-----AYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAAL 240 (319)
Q Consensus 166 G~~~raGg~Ghl~gd~Gsa~~iG~~~~~~~~~-----~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~ 240 (319)
|++++ |..|.++|+||..+..... ..++..|.|....+++... +...+.+.+..... ....
T Consensus 166 G~l~~--------G~~g~aGEiGh~~v~~~~~~~~~~~~~g~~C~cG~~gclE~~~---S~~al~~~~~~~~~---~~~~ 231 (327)
T 4db3_A 166 GKVFS--------GRNNVAGELGHMRLPLDAWFHLGDNAPLLGCGCGKKGCLDSYL---SGRGFELLYAHYYG---EEKK 231 (327)
T ss_dssp TEECC--------CTTSCTTCGGGSBCCHHHHHHTCTTCCCCBCTTSCBSBGGGTS---SHHHHHHHHHHHHS---CCCC
T ss_pred CEEee--------cCCCcCcccccEEeccccccccccccCCCcCCCCCcchhHhhh---CHHHHHHHHHHhcC---CCCC
Confidence 99987 5555555555554431100 0144455554444443333 44444443321000 0013
Q ss_pred hHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 241 VPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 241 ~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
.+.|++++++||+.|++++++++++|+.+++++++.||| +.|||+|+++ .. +.|++++.+
T Consensus 232 ~~~i~~~a~~gD~~a~~~~~~~~~~La~~i~~l~~~l~p--------------~~IvlgGgi~-~~-~~l~~~l~~ 291 (327)
T 4db3_A 232 AIDIIKANAAGDEKAAEHVERFMELLAICFGNIFTANDP--------------HVVALGGGLS-NF-ELIYEEMPK 291 (327)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------SEEEEESGGG-GC-THHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CEEEEeCccc-ch-HHHHHHHHH
Confidence 577999999999999999999999999999999999998 4799999998 55 457777665
No 11
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=100.00 E-value=1.7e-34 Score=275.07 Aligned_cols=240 Identities=14% Similarity=0.133 Sum_probs=185.4
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (319)
+|...|+||||+|+|+++++++|. +|+++.+.+.+.... .+++++++.+.+.+++++++.+.+..++.+
T Consensus 83 ~~~~~~~lGIDiGgt~i~~~l~d~---------~G~vl~~~~~~~~~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~g 151 (380)
T 2hoe_A 83 SPNCAYVLGIEVTRDEIAACLIDA---------SMNILAHEAHPLPSQ--SDREETLNVMYRIIDRAKDMMEKLGSKLSA 151 (380)
T ss_dssp CGGGCEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCSS--CCHHHHHHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred ccCCCeEEEEEECCCEEEEEEECC---------CCCEEEEEEEccCCC--CCHHHHHHHHHHHHHHHHHhcCCCcCcEEE
Confidence 455679999999999999999999 999999887754322 378999999999999999887655568999
Q ss_pred EEEeecCCCCchh------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-CCC--CCeEEEEECccceeEeE
Q 020972 98 VCLAVSGVNHPTD------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-MGK--LHGCVLIAGTGTIAYGF 162 (319)
Q Consensus 98 Igig~pG~~~~~~------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-~g~--~~~v~v~~GTGigg~gi 162 (319)
||||+||+++++. +.++++.|++.|+ .||+++||+|++++++. +|. ++++|+++|||++ +|+
T Consensus 152 igi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG-~gi 228 (380)
T 2hoe_A 152 LTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYG--IEVWVENDADMGAVGEKWYTKRDDSFAWILTGKGIG-AGI 228 (380)
T ss_dssp EEEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHC--SEEEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCE-EEE
T ss_pred EEEEeeccEECCCCEEeccCCCCCcCCChHHHHHHHhC--CCEEEechHHHHHHHHHHhCCCCCcEEEEEeCCceE-EEE
Confidence 9999999976532 2588999999997 89999999999999874 333 7999999999995 589
Q ss_pred ecCCcEEeeCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhchhH
Q 020972 163 TEDGRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVP 242 (319)
Q Consensus 163 i~dG~~~raGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~ 242 (319)
+.||++++ |..|.++|+||..+. .+ ..|.|+-..+++.++ +...+.+ ..+
T Consensus 229 v~~G~l~~--------G~~g~aGEiGh~~v~-----~~-~~c~cG~~gclE~~~---s~~~l~~-------------~~~ 278 (380)
T 2hoe_A 229 IIDGELYR--------GENGYAGEIGYTRVF-----NG-NEYVFLEDVCNENVV---LKHVLSM-------------GFS 278 (380)
T ss_dssp EETTEECC--------CSSSCCCCGGGCEEE-----CS-SSEEEHHHHHCHHHH---HHHHHHH-------------CCC
T ss_pred EECCEEec--------cCCCccccccceEec-----CC-CCCCCCCccHHHHHc---CHHHHHH-------------HHH
Confidence 99999987 334444444443321 11 223344444444433 2222221 234
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 243 VVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 243 ~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
.+++++++||+.|.+++++++++|+.+++++++.||| +.|||+|+++ ..++.|++++.+
T Consensus 279 ~v~~~a~~gD~~a~~~l~~~~~~La~~i~~l~~~ldP--------------~~IvlgG~~~-~~~~~l~~~l~~ 337 (380)
T 2hoe_A 279 SLAEARDSGDVRVKEYFDDIARYFSIGLLNLIHLFGI--------------SKIVIGGFFK-ELGENFLKKIKI 337 (380)
T ss_dssp -TTHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CEEEEEEGGG-GGHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CEEEEcCchh-hhhHHHHHHHHH
Confidence 5788899999999999999999999999999999998 4799999998 678888888765
No 12
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=100.00 E-value=2.1e-34 Score=266.41 Aligned_cols=242 Identities=17% Similarity=0.142 Sum_probs=183.0
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
|+||||+|+|+++++++|. + .++.+.+.++. . ...+++++.+.+.+++++++. ..++.+|||++
T Consensus 2 ~~lgiDiGgt~i~~~l~d~---------~-~~l~~~~~~~~-~--~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi~~ 65 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDG---------K-RLLSKVVVPTP-K--EGGERVAEALAEAAERAEREA---GVRGEAIGLGT 65 (302)
T ss_dssp CEEEEEECSSEEEEEEECS---------S-SBSCCEEEECC-S--SCHHHHHHHHHHHHHHHHHHH---TCCCSSEEEEE
T ss_pred EEEEEEEcCCEEEEEEEeC---------C-CcEEEEEEcCC-C--CChHHHHHHHHHHHHHHHhhc---cCCceEEEEEe
Confidence 7999999999999999998 7 45555555432 2 234889999999999988765 34799999999
Q ss_pred cCCCCchh-------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCeEEEEECccceeEeEec
Q 020972 103 SGVNHPTD-------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (319)
Q Consensus 103 pG~~~~~~-------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-----~g~~~~v~v~~GTGigg~gii~ 164 (319)
||+++++. +.++++.|+++|+ +||+++||+|+++++|. ++.++++|+++|||++ +|++.
T Consensus 66 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG-~gii~ 142 (302)
T 3vov_A 66 PGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATG--RPVFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIG-GGVVL 142 (302)
T ss_dssp SSCEETTTTEEC---CCTTCTTCCHHHHHHHHHS--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEE-EEEEE
T ss_pred cccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhC--CCEEEEechHHHHHHHHHhCCCCCCCCEEEEEECCcee-EEEEE
Confidence 99976431 2578999999997 99999999999999874 3568999999999995 57999
Q ss_pred CCcEEeeCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhchhHHH
Q 020972 165 DGRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVV 244 (319)
Q Consensus 165 dG~~~raGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~v 244 (319)
||++++ |..|.++|+||..+. .++..|.|....+++... +...+.+.+..... .....+.|
T Consensus 143 ~g~l~~--------G~~g~aGEiGh~~v~-----~~g~~c~cg~~gclE~~~---s~~~l~~~~~~~~~---~~~~~~~i 203 (302)
T 3vov_A 143 GGRVLR--------GERGQGGELGHLTLL-----PGGPACGCGLEGCLEALA---AGRALERDATYAFQ---RPVDTREL 203 (302)
T ss_dssp TTEECC--------CTTSCTTCGGGSBSS-----TTCCBCTTSCBSBHHHHH---SHHHHHHHHHHHHT---SCCCHHHH
T ss_pred CCEEee--------CCCCCCccccceEec-----CCCCCCCCCCcchHHHHh---CHHHHHHHHHHhhC---CCCCHHHH
Confidence 999998 556666666665442 244445554444444444 33444443321000 00135789
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 245 VSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 245 ~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
++++++||+.|++++++++++|+.+++++++.||| +.|||+|+++...++.|++++.+
T Consensus 204 ~~~a~~gd~~a~~~~~~~~~~l~~~i~~l~~~~~p--------------~~ivlgG~i~~~~~~~l~~~l~~ 261 (302)
T 3vov_A 204 FRLFQAGDPKAERLVLQAARYVGIGLASLVKAFDP--------------GVVVLGGGVALNAPEGYWEALLE 261 (302)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------SEEEEESHHHHTSCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CEEEEeChhHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999998 47889888874567888888765
No 13
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=100.00 E-value=2.2e-34 Score=276.48 Aligned_cols=247 Identities=12% Similarity=0.085 Sum_probs=188.7
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (319)
+|...|+||||+|+|+++++++|. +|+++.+.+.+. .. .+++++++.+.+.+++++++.+.+..++.+
T Consensus 81 ~~~~~~~lgiDiG~t~i~~~l~d~---------~G~il~~~~~~~-~~--~~~~~~~~~l~~~i~~~~~~~~~~~~~i~g 148 (406)
T 1z6r_A 81 ETEAWHYLSLRISRGEIFLALRDL---------SSKLVVEESQEL-AL--KDDLPLLDRIISHIDQFFIRHQKKLERLTS 148 (406)
T ss_dssp CCTTCEEEEEEEETTEEEEEEEET---------TCCEEEEEEEEC-CS--SCSSCHHHHHHHHHHHHHHHTGGGCCCEEE
T ss_pred cCCccEEEEEEEcCCEEEEEEEcC---------CCCEEEEEEecC-CC--CCHHHHHHHHHHHHHHHHHhcCCCcCceeE
Confidence 566779999999999999999999 999999887654 22 467888999999999999887766668999
Q ss_pred EEEeecCCCCchh-------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCeEEEEECcccee
Q 020972 98 VCLAVSGVNHPTD-------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIA 159 (319)
Q Consensus 98 Igig~pG~~~~~~-------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-----~g~~~~v~v~~GTGigg 159 (319)
|||++||+++++. +.+|++.|++.|+ .||+|+||+|++++++. .+.++++|+++|||++
T Consensus 149 igi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG- 225 (406)
T 1z6r_A 149 IAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTG--VPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVG- 225 (406)
T ss_dssp EEEEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHS--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEE-
T ss_pred EEEEeecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHC--CCEEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEE-
Confidence 9999999965421 2579999999997 89999999999999874 3567899999999995
Q ss_pred EeEecCCcEEe-----eCCCCCccCCc-CChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhcc---
Q 020972 160 YGFTEDGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV--- 230 (319)
Q Consensus 160 ~gii~dG~~~r-----aGg~Ghl~gd~-Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~--- 230 (319)
+|++.||++++ +|||||+..+. |..|+||+. .|++.+. +...+.+.+..
T Consensus 226 ~giv~~G~l~~G~~g~AGEiGh~~v~~~g~~c~cG~~-------------------gclE~~~---S~~al~~~~~~~~~ 283 (406)
T 1z6r_A 226 AGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNH-------------------GCLETIA---SVDSILELAQLRLN 283 (406)
T ss_dssp EEEEETTEETTTTSSCCBCGGGSBSCTTSCBCTTSCB-------------------SBTHHHH---SHHHHHHHHHHHHT
T ss_pred EEEEECCEEeecCCCcCccCCceEecCCCCCCCCCCc-------------------cchHHHc---CHHHHHHHHHHhhh
Confidence 58999999986 78888887653 333333321 1122222 22222222110
Q ss_pred -CC-Ch-HHHhchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcH
Q 020972 231 -DP-SW-ARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSW 307 (319)
Q Consensus 231 -~~-~~-~~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~ 307 (319)
.. .. ..-....+.|++++++||+.|.+++++++++|+.+++++++.||| +.|||+|+++ ..+
T Consensus 284 ~~~~~~~~~~~~~~~~v~~~a~~gD~~a~~~l~~~~~~L~~~i~~l~~~ldP--------------~~IvlgG~i~-~~~ 348 (406)
T 1z6r_A 284 QSMSSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFNP--------------QKILIGSPLS-KAA 348 (406)
T ss_dssp TCTTCGGGSSCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------SEEEEESGGG-GGH
T ss_pred cccccccCcccCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CEEEEeCccc-hhh
Confidence 00 00 000113678999999999999999999999999999999999998 4799999998 678
Q ss_pred HHHHHHHhh
Q 020972 308 LVVFLKLIE 316 (319)
Q Consensus 308 ~~~~~~~~~ 316 (319)
+.|++++.+
T Consensus 349 ~~l~~~i~~ 357 (406)
T 1z6r_A 349 DILFPVISD 357 (406)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887765
No 14
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=100.00 E-value=7.4e-34 Score=262.09 Aligned_cols=230 Identities=14% Similarity=0.129 Sum_probs=168.4
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
|+||||+|+|+++++++|. +|+++.+.+.+..+ .+++++++.+.+. +++ ..++.+|||++
T Consensus 5 ~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~----~~~----~~~i~gigi~~ 64 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLP---------HGEIILTKSAEISG---SDGDQILAEMKVF----LAE----NTDVTGIAVSA 64 (297)
T ss_dssp CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECST---TCHHHHHHHHHHH----HHT----CTTCCEEEEEE
T ss_pred EEEEEEeCCCeEEEEEECC---------CCCEEEEEEecCCC---CCHHHHHHHHHHH----Hhh----cCCeeEEEEec
Confidence 7999999999999999999 99999988775432 3456666555443 332 24789999999
Q ss_pred cCCCCchh-------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCeEEEEECccceeEeEec
Q 020972 103 SGVNHPTD-------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYGFTE 164 (319)
Q Consensus 103 pG~~~~~~-------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-----~g~~~~v~v~~GTGigg~gii~ 164 (319)
||+++++. +.+|++.|+++|+ +||+++||+|+++++|. ++.++++|+++|||+|+ |++.
T Consensus 65 pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~--~pV~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~-giv~ 141 (297)
T 4htl_A 65 PGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETG--LPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGG-GIFS 141 (297)
T ss_dssp SSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEE-EEEE
T ss_pred CcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHC--cCEEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcceEE-EEEE
Confidence 99976431 2478999999997 99999999999999874 35689999999999954 7999
Q ss_pred CCcEEe-----eCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhcc--CCChHHH
Q 020972 165 DGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV--DPSWARI 237 (319)
Q Consensus 165 dG~~~r-----aGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 237 (319)
||++++ +|++||+..+..... ++-..++++.+ +...+.+.+.. ......
T Consensus 142 ~G~l~~G~~g~aGEiGh~~~~~~~~~--------------------~~~~~~le~~~---s~~~l~~~~~~~~~~~~~~- 197 (297)
T 4htl_A 142 NGELVRGGRFRAGEFGYMFSERPGAF--------------------RPGKYTLNETT---TMLVLRRQYAELTGRPLEE- 197 (297)
T ss_dssp TTEECCCTTSCCCCGGGSBSSCCCSS--------------------CGGGGBHHHHS---SHHHHHHHHHHHHCCCGGG-
T ss_pred CCEEEecCCCCcccccceEecCCCCc--------------------CcccCcHHHhc---cHHHHHHHHHHHhcCCccC-
Confidence 999987 677777655322110 01111222222 33333332211 001111
Q ss_pred hchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 238 AALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 238 a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
...+.|++++++||+.|++++++++++|+.+++++++.||| +.|||+||++ .. +.|++++.+
T Consensus 198 -~~~~~i~~~a~~gd~~a~~~~~~~~~~La~~i~~l~~~~~p--------------~~IvlgGgi~-~~-~~~~~~l~~ 259 (297)
T 4htl_A 198 -ITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFDP--------------THIFIGGGIT-SR-PTFIAELKH 259 (297)
T ss_dssp -CCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------SEEEEESGGG-GS-TTHHHHHHH
T ss_pred -CCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CEEEEeCccc-cc-HHHHHHHHH
Confidence 12578999999999999999999999999999999999998 4799999998 44 557777765
No 15
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=100.00 E-value=2.9e-33 Score=261.15 Aligned_cols=246 Identities=16% Similarity=0.072 Sum_probs=183.3
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEe
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig 101 (319)
.|+||||+|+|+++++++|. +|+++.+.+.++.+ .+++++++.|.+.++++..+.+ ++.+||||
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~---------~g~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~----~i~~igi~ 87 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDS---------TRRLQWEKRVPTPH---TSYSAFLDAVCELVEEADQRFG----VKGSVGIG 87 (327)
T ss_dssp CEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCC---SCHHHHHHHHHHHHHHHHHHHT----SCCEEEEE
T ss_pred ceEEEEEECCCEEEEEEEeC---------CCCEEEEEEecCCC---CCHHHHHHHHHHHHHHHHHhcC----CccEEEEE
Confidence 37999999999999999999 99999988775533 2678889999999988876542 47899999
Q ss_pred ecCCCCchh------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-C----CCCCeEEEEECccceeEeEec
Q 020972 102 VSGVNHPTD------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAYGFTE 164 (319)
Q Consensus 102 ~pG~~~~~~------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-~----g~~~~v~v~~GTGigg~gii~ 164 (319)
+||+++++. +.+|++.|++.|+ +||+|+||+|++++++. + +.++++|+++|||++ +|++.
T Consensus 88 ~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~--~pv~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtGiG-~giv~ 164 (327)
T 2ap1_A 88 IPGMPETEDGTLYAANVPAASGKPLRADLSARLD--RDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVG-GGLVL 164 (327)
T ss_dssp ESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHT--SCEEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSSEE-EEEEE
T ss_pred eeeeEECCCCEEEccCCCccCCCChHHHHHHHHC--CCEEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCcEE-EEEEE
Confidence 999976532 2478999999997 89999999999999874 2 457899999999985 58999
Q ss_pred CCcEEe-----eCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhc
Q 020972 165 DGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAA 239 (319)
Q Consensus 165 dG~~~r-----aGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~ 239 (319)
||++++ +|+|||+..+.++..+.+. ...+..|.|....+++..+ +...+.+.+..... . ..
T Consensus 165 ~G~l~~G~~g~aGE~Gh~~~~~~~~~~~~~--------~~~g~~c~cG~~gcle~~~---s~~~l~~~~~~~~~-~--~~ 230 (327)
T 2ap1_A 165 NGKPITGQSYITGEFGHMRLPVDALTLMGF--------DFPLRRCGCGQMGCIENYL---SGRGFAWLYQHYYD-Q--SL 230 (327)
T ss_dssp TTEEECCTTSCTTCGGGSBCCHHHHHHHCT--------TSCCCBCTTSCBSBTHHHH---SHHHHHHHHHHHHC-C--CC
T ss_pred CCEEeecCCCcccccccEEEecCccccccc--------ccCCCcCCCCchhhHHHHh---CHHHHHHHHHHhcC-C--CC
Confidence 999987 6778887766543332111 0113334443333444444 33444443321000 0 01
Q ss_pred hhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 240 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 240 ~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
.++.|+++|++||+.|++++++++++|+.+++++++.||| +.|||+|+++ ..++ ++.++++
T Consensus 231 ~~~~i~~~a~~gd~~a~~il~~~~~~La~~i~~l~~~l~p--------------~~IvlgG~i~-~~~~-~~~~l~~ 291 (327)
T 2ap1_A 231 QAPEIIALWEQGDEQAHAHVERYLDLLAVCLGNILTIVDP--------------DLLVIGGGLS-NFTA-ITTQLAE 291 (327)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------SEEEEESGGG-GSTH-HHHSSGG
T ss_pred CHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CEEEEeChhh-cchh-HHHHHHH
Confidence 3678999999999999999999999999999999999998 4799999998 5555 4445544
No 16
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=100.00 E-value=2.2e-33 Score=260.57 Aligned_cols=240 Identities=11% Similarity=0.062 Sum_probs=163.4
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (319)
+|...|+||||+|+|+++++++|. +|+++.+.+.++.+ ..++.+++.+.+.+++++++.+ .++.+
T Consensus 3 ~~~~~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~~---~~i~g 67 (310)
T 3htv_A 3 QKQHNVVAGVDMGATHIRFCLRTA---------EGETLHCEKKRTAE---VIAPGLVSGIGEMIDEQLRRFN---ARCHG 67 (310)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEET---------TSCEEEEEEEEHHH---HHTTCHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred CCCCCEEEEEEeCCCEEEEEEECC---------CCCEEEEEEecCcc---ccHHHHHHHHHHHHHHHHHhcC---CCeeE
Confidence 455679999999999999999999 99999887654321 1245677888888888776653 26899
Q ss_pred EEEeecCCCCchh------------H---HHHHHHHHhhCCCCceEEEeCcHHHHHHhhc----CCCCCeEEEEECccce
Q 020972 98 VCLAVSGVNHPTD------------Q---QRILNWLRDIFPGNVRLYVHNDALAALASGT----MGKLHGCVLIAGTGTI 158 (319)
Q Consensus 98 Igig~pG~~~~~~------------~---~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~----~g~~~~v~v~~GTGig 158 (319)
||||+||+++++. . .+|++.|+++|+ +||+++||+|++++++. .+.++++|+++|||+|
T Consensus 68 igi~~pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~--~pv~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtGiG 145 (310)
T 3htv_A 68 LVMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLN--CPVEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMG 145 (310)
T ss_dssp EEEEESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHT--SCEEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSSEE
T ss_pred EEEeccccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhC--CCEEEeeHHHHHHHHHHhhcccCCceEEEEEeceeEE
Confidence 9999999987431 1 478999999997 99999999999887652 3557899999999995
Q ss_pred eEeEecCCcEEeeCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHh
Q 020972 159 AYGFTEDGRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIA 238 (319)
Q Consensus 159 g~gii~dG~~~raGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a 238 (319)
+ |+++||++++ |..|.++|+||..+. .++..|.|+...|++.+. +...+.++...... .
T Consensus 146 ~-gii~~G~l~~--------G~~g~aGEiGh~~v~-----~~g~~C~cG~~GclE~~~---S~~al~~~~~~~~~--~-- 204 (310)
T 3htv_A 146 F-AVWMNGAPWT--------GAHGVAGELGHIPLG-----DMTQHCACGNPGCLETNC---SGMALRRWYEQQPR--N-- 204 (310)
T ss_dssp E-EEEETTEEEC--------CSSSCCCC--------------------------CCSS---SHHHHHHHHTTSCC--S--
T ss_pred E-EEEECCEEee--------cCCCCceeCcceEeC-----CCCCcCCCCCCceehhhh---CHHHHHHHHHhccC--C--
Confidence 5 7999999998 777777778877663 244455555444443332 44555554432111 0
Q ss_pred chhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHh
Q 020972 239 ALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLI 315 (319)
Q Consensus 239 ~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~ 315 (319)
...+.+++++ ++|+.+.++++++ +.++++++++||| +.|||+||++ +.++.+++++.
T Consensus 205 ~~~~~~~~~~-~~d~~~~~~~~~~----a~~la~l~~~~dP--------------~~IvlgG~v~-~~~~~~~~~l~ 261 (310)
T 3htv_A 205 YPLRDLFVHA-ENAPFVQSLLENA----ARAIATSINLFDP--------------DAVILGGGVM-DMPAFPRETLV 261 (310)
T ss_dssp SCGGGHHHHH-TTCHHHHHHHHHH----HHHHHHHHHHHCC--------------SEEEEECTTT-TSTTCCHHHHH
T ss_pred CCHHHHHHHH-cCChHHHHHHHHH----HHHHHHHHHhhCC--------------CEEEEeCchh-ccchhHHHHHH
Confidence 1234577766 5999888887764 5678899999998 5899999998 66655554444
No 17
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=100.00 E-value=4.3e-33 Score=261.68 Aligned_cols=242 Identities=15% Similarity=0.123 Sum_probs=177.2
Q ss_pred CcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEE
Q 020972 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (319)
Q Consensus 21 ~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igi 100 (319)
..|+||||+|+|+++++++|. +|+++.+.+.++ + .+++++++.+.+.+++++++.+....++.+|||
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~~-~---~~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi 95 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSM---------KGEIVKKYTQFN-P---KTYEERINLILQMCVEAAAEAVKLNCRILGVGI 95 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEET---------TSCEEEEEEEEC-C---SSHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECC---------CCcEEEEEEEcC-C---CCHHHHHHHHHHHHHHHHHhcccccCceEEEEE
Confidence 359999999999999999999 999998877643 2 367888899999999988775544567999999
Q ss_pred eecCCCCchh--------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCeEEEEECccceeEe
Q 020972 101 AVSGVNHPTD--------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIAYG 161 (319)
Q Consensus 101 g~pG~~~~~~--------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-----~g~~~~v~v~~GTGigg~g 161 (319)
++||+++++. +.+|++.|+++|+ .||+|+||+|++++++. .+.++++|+++|||++ +|
T Consensus 96 ~~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtGiG-~g 172 (343)
T 2yhw_A 96 STGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLH--LPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIG-GG 172 (343)
T ss_dssp EESSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHC--SCEEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSSEE-EE
T ss_pred ecccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCCEE-EE
Confidence 9999865421 1468899999997 89999999999999874 2457899999999985 58
Q ss_pred EecCCcEEe-----eCCCCCccCCc-CChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChH
Q 020972 162 FTEDGRDAR-----AAGAGPILGDW-GSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWA 235 (319)
Q Consensus 162 ii~dG~~~r-----aGg~Ghl~gd~-Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ 235 (319)
++.||++++ +|||||+..+. |..|+||...+-. ...+...+.+.+.+.+.. +...+ .......
T Consensus 173 ii~~G~l~~G~~g~aGEiGh~~~~~~g~~c~cG~~gclE------~~~s~~al~~~~~~~~~~-~~~~~----~~~~~~~ 241 (343)
T 2yhw_A 173 IIHQHELIHGSSFCAAELGHLVVSLXGPDCSCGSHGCIE------AYASGMALQREAKKLHDE-DLLLV----EGMSVPK 241 (343)
T ss_dssp EEETTEECCCTTSCTTCGGGCBCCC--CBCTTSCBSBHH------HHHSHHHHHHHHHHHHHT-TCSCC----TTCCC--
T ss_pred EEECCEEecCCCCcccccCCEEEccCCCcCCCCCCCcHH------HhcCHHHHHHHHHHhhcc-ccccc----ccccccc
Confidence 999999987 79999998764 5556665433210 011122333322222110 00000 0000000
Q ss_pred HHhchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchh
Q 020972 236 RIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILF 303 (319)
Q Consensus 236 ~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~ 303 (319)
.....++.|+++|++||+.|++++++++++|+.+++++++.||| +.|||+|+++
T Consensus 242 ~~~~~~~~v~~~a~~gd~~a~~il~~~~~~La~~i~~l~~~l~P--------------~~IvlgG~i~ 295 (343)
T 2yhw_A 242 DEAVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNP--------------SLVILSGVLA 295 (343)
T ss_dssp --CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC--------------SEEEEESTTH
T ss_pred cccCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CEEEEeCCcH
Confidence 00123678999999999999999999999999999999999998 4799999987
No 18
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=100.00 E-value=3.3e-33 Score=256.15 Aligned_cols=230 Identities=15% Similarity=0.104 Sum_probs=174.5
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
|+||||+|+|+++++++|. +|+++.+.+.++.+. .+++++++.|.+.+++++. ++.+||||+
T Consensus 2 ~~lgidiggt~~~~~l~d~---------~g~il~~~~~~~~~~--~~~~~~~~~i~~~i~~~~~-------~~~~igi~~ 63 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGA---------DGQIRDRRELPTPAS--QTPEALRDALSALVSPLQA-------HAQRVAIAS 63 (289)
T ss_dssp CEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCSS--CCHHHHHHHHHHHHTTTGG-------GCSEEEEEE
T ss_pred eEEEEEeCCCEEEEEEECC---------CCCEEEEEEecCCCC--CCHHHHHHHHHHHHHHHHh-------hCCEEEEEe
Confidence 6899999999999999999 999999888765332 3688888888888776643 345899999
Q ss_pred cCCCCchh-------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-C----CCCCeEEEEECccceeEeEec
Q 020972 103 SGVNHPTD-------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-M----GKLHGCVLIAGTGTIAYGFTE 164 (319)
Q Consensus 103 pG~~~~~~-------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-~----g~~~~v~v~~GTGigg~gii~ 164 (319)
||+++++. +.+|++.|+++|+ .||+++||+|++++++. + +. +++|+++|||+ |+|++.
T Consensus 64 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~--~pv~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtGi-G~gii~ 139 (289)
T 2aa4_A 64 TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTN--LPTIAINDAQAAAWAEFQALDGDIT-DMVFITVSTGV-GGGVVS 139 (289)
T ss_dssp SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSSE-EEEEEE
T ss_pred ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHC--CCEEEechHHHHHHHHHHhCCCCCc-eEEEEEeCccE-EEEEEE
Confidence 99965421 2478999999997 89999999999999873 2 34 99999999998 558999
Q ss_pred CCcEEe-----eCCCCCccCCcCCh-HHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHh
Q 020972 165 DGRDAR-----AAGAGPILGDWGSG-YGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIA 238 (319)
Q Consensus 165 dG~~~r-----aGg~Ghl~gd~Gsa-~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a 238 (319)
||++++ +|||||+..+.++. ++||+. .+++... +...+.+.+... ...
T Consensus 140 ~G~l~~G~~g~aGE~Gh~~~~~~g~~c~cG~~-------------------gcle~~~---s~~~l~~~~~~~----~~~ 193 (289)
T 2aa4_A 140 GCKLLTGPGGLAGHIGHTLADPHGPVCGCGRT-------------------GCVEAIA---SGRGIAAAAQGE----LAG 193 (289)
T ss_dssp TTEEECCTTSCCCCGGGSBSCTTSCBCTTSCB-------------------SBHHHHH---SHHHHHHTCCGG----GTT
T ss_pred CCEEeeCCCCCCccCCcEEECCCCCcCCCCCc-------------------hhHHHHh---CHHHHHHHHHHh----ccC
Confidence 999986 89999998865432 233221 1222222 233333322110 001
Q ss_pred chhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 239 ALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 239 ~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
...+.+++++++||+.|++++++++++|+..++++++.||| +.|||+|+++ . .+.|++++.+
T Consensus 194 ~~~~~v~~~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~p--------------~~ivlgG~~~-~-~~~~~~~l~~ 255 (289)
T 2aa4_A 194 ADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDC--------------QCVVVGGSVG-L-AEGYLALVET 255 (289)
T ss_dssp CCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------SEEEEEHHHH-T-STTHHHHHHH
T ss_pred CCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CEEEEeCccc-c-cHHHHHHHHH
Confidence 23678999999999999999999999999999999999998 4799999988 3 4667777664
No 19
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=99.98 E-value=1.4e-31 Score=245.71 Aligned_cols=224 Identities=12% Similarity=0.072 Sum_probs=166.6
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
++||||+|+|+++++++|. +|+++.+.+.++. .+++++++.+.+.+++ .++.+||||+
T Consensus 5 ~~lgidiggt~i~~~l~d~---------~g~il~~~~~~~~----~~~~~~~~~i~~~i~~---------~~i~gigi~~ 62 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTP---------DGKILDKTSISTP----ENLEDLLAWLDQRLSE---------QDYSGIAMSV 62 (292)
T ss_dssp CEEEEEEETTEEEEEEECT---------TCCEEEEEEECCC----SSHHHHHHHHHHHHTT---------SCCSEEEEEE
T ss_pred EEEEEEECCCEEEEEEECC---------CCCEEEEEEEeCC----CCHHHHHHHHHHHHHh---------CCCcEEEEEe
Confidence 5999999999999999999 9999998877542 3577777766665543 3688999999
Q ss_pred cCCCCchh-------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc---CCCCCeEEEEECccceeEeEecCC
Q 020972 103 SGVNHPTD-------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT---MGKLHGCVLIAGTGTIAYGFTEDG 166 (319)
Q Consensus 103 pG~~~~~~-------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~---~g~~~~v~v~~GTGigg~gii~dG 166 (319)
||+++++. +.+|++.| ++|+ +||+++||+|++++++. ++.++++|+++|||++ +|++.||
T Consensus 63 pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~--~pv~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtGiG-~giv~~G 138 (292)
T 2gup_A 63 PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQ--LPVHLENDANCVGLSELLAHPELENAACVVIGTGIG-GAMIING 138 (292)
T ss_dssp SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGC--CCEEEEEHHHHHHHHHHHHCTTCSSEEEEEESSSEE-EEEEETT
T ss_pred cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcC--CCEEEechHHHHHHHHHHhcCCCCeEEEEEECCceE-EEEEECC
Confidence 99976421 25789999 8997 89999999999999975 4678999999999985 5899999
Q ss_pred cEEe-----eCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhchh
Q 020972 167 RDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALV 241 (319)
Q Consensus 167 ~~~r-----aGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~ 241 (319)
++++ +|+|||+..+.++ +. ..+++... +...+.+.+....... ....
T Consensus 139 ~l~~G~~g~aGEiGh~~~~~~~------------------~~-----~gcle~~~---s~~~l~~~~~~~~~~~--~~~~ 190 (292)
T 2gup_A 139 RLHRGRHGLGGEFGYMTTLAPA------------------EK-----LNNWSQLA---STGNMVRYVIEKSGHT--DWDG 190 (292)
T ss_dssp EEECCTTSCTTCGGGCBSSCCS------------------SS-----CCBHHHHH---SHHHHHHHHHHHHSSC--CCCH
T ss_pred EEEecCCCCCccceeEEeccCC------------------CC-----CCcHHHhc---CHHHHHHHHHHhhCCC--CCCH
Confidence 9987 4566666554311 00 01122222 2333333322100000 0135
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 242 PVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 242 ~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
+.+++++++||+.|++++++++++|+.+++++++.||| +.|||+|+++ . .+.|++++.+
T Consensus 191 ~~v~~~a~~gd~~a~~i~~~~~~~L~~~i~~l~~~l~p--------------~~IvlgG~i~-~-~~~~~~~l~~ 249 (292)
T 2gup_A 191 RKIYQEAAAGNILCQEAIERMNRNLAQGLLNIQYLIDP--------------GVISLGGSIS-Q-NPDFIQGVKK 249 (292)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------SEEEEESGGG-G-CHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CEEEEeCccc-c-chHHHHHHHH
Confidence 78999999999999999999999999999999999998 4799999997 4 5777777765
No 20
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=99.97 E-value=1.9e-31 Score=252.36 Aligned_cols=233 Identities=16% Similarity=0.108 Sum_probs=171.0
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEE-ecCCCCccccCHHHHHHHHHH---HHHHHHHHcCCCcc
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA-AAGCSNHNSVGEDAARETIEK---VMADALLKSGSNRS 93 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~-~~~~~~~~~~~~~~~~~~i~~---~i~~~l~~~~~~~~ 93 (319)
+|...|+||||+|+|+++++++| +|+++.+. +.+. .. .+++++++.+.+ .+++++. .
T Consensus 5 n~d~~~~lgiDIGgt~i~~~l~d----------~G~il~~~~~~~~-~~--~~~~~~l~~i~~~~~~i~~~~~------~ 65 (366)
T 3mcp_A 5 TNDNRIVMTLDAGGTNFVFSAIQ----------GGKEIADPVVLPA-CA--DCLDKCLGNLVEGFKAIQAGLP------E 65 (366)
T ss_dssp TTCCCEEEEEECSSSEEEEEEEE----------TTEECSCCEEEEC-CT--TCHHHHHHHHHHHHHHHHTTCS------S
T ss_pred CCCCCEEEEEEECcceEEEEEEE----------CCEEEEEEEEEEC-CC--CCHHHHHHHHHHHHHHHHHHhh------c
Confidence 56678999999999999999999 37787766 5543 22 278888888888 5554432 4
Q ss_pred ccceEEEeecCCCCch-----------h---HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-CC--------------
Q 020972 94 AVRAVCLAVSGVNHPT-----------D---QQRILNWLRDIFPGNVRLYVHNDALAALASGT-MG-------------- 144 (319)
Q Consensus 94 ~i~~Igig~pG~~~~~-----------~---~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-~g-------------- 144 (319)
++.+|||++||+++++ . +++|++.|+++|+ +||+++||+|+++++|. +|
T Consensus 66 ~i~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g--~PV~veNDanaaAlgE~~~G~~p~~~~~l~~~g~ 143 (366)
T 3mcp_A 66 APVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFG--IPVFINNDGSLFAYGEALTGVLPEINRRLREAGS 143 (366)
T ss_dssp CCCEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHC--SCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTC
T ss_pred CCeEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHC--CCEEEechhhHHHHHHHHhCCCcccccccccccc
Confidence 7999999999997632 1 2478999999997 89999999999999873 33
Q ss_pred ---CCCeEEEEECccceeEeEecCCcEEe-----eCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHc
Q 020972 145 ---KLHGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTL 216 (319)
Q Consensus 145 ---~~~~v~v~~GTGigg~gii~dG~~~r-----aGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~ 216 (319)
.++++|+++|||+| +|++.||++++ +||+||+. + .||+. | |++...
T Consensus 144 ~~~~~~~v~l~lGtGIG-~givi~G~l~~G~~g~AGEiGH~~-~-----~CG~~----------G---------clE~~~ 197 (366)
T 3mcp_A 144 TKRYKNLLGVTLGTGFG-AGVVIDGELLRGDNAAGGYVWCLR-N-----KKYPE----------Y---------IVEESV 197 (366)
T ss_dssp CCCCCEEEEEEESSSEE-EEEEETTEECCCTTSCTTCCTTSB-C-----SSCTT----------S---------BGGGTS
T ss_pred cCCCCcEEEEEECCcce-EEEEECCEEecCCCCCCceeeccc-C-----CCCCC----------c---------ceeeee
Confidence 57899999999995 47999999987 56666665 2 11111 1 111111
Q ss_pred CCCChhhHHHHhccCCChHHHhchhHHHHHHHH---cCC-HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccc
Q 020972 217 ELSSPDELIGWTYVDPSWARIAALVPVVVSCAE---AGD-EVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKE 292 (319)
Q Consensus 217 ~~~~~~~l~~~~~~~~~~~~~a~~~~~v~~~A~---~GD-~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~ 292 (319)
+...+.+.+........ ....+.|+++++ +|| +.|++++++++++||.+++++++.|||
T Consensus 198 ---S~~al~~~~~~~~~~~~-~~~~~~i~~~a~~~~~gD~~~a~~~l~~~~~~Lg~~i~nl~~~ldP------------- 260 (366)
T 3mcp_A 198 ---SIRAVMRVYAERSGDAG-ARTPKEIFEIAEGIRPGNREAAIAAFEELGEMAGDALASAITLIDG------------- 260 (366)
T ss_dssp ---SHHHHHHHHHHHSSCCS-CCCHHHHHHHHHTSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCS-------------
T ss_pred ---cHHHHHHHHHHhhCCCC-CCCHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------------
Confidence 22333332210000000 012567899999 999 999999999999999999999999996
Q ss_pred cccEEEEcchhhhcHHHHHHHHhhc
Q 020972 293 KVPLLMENILFLLSWLVVFLKLIEG 317 (319)
Q Consensus 293 ~~~ivl~Gg~~~~~~~~~~~~~~~~ 317 (319)
.|||+|++. ..++.|++++.+.
T Consensus 261 --~IviGGgi~-~~~~~~~~~l~~~ 282 (366)
T 3mcp_A 261 --LIVIGGGLS-GASKYILPVLLKE 282 (366)
T ss_dssp --EEEEESGGG-GGHHHHHHHHHHH
T ss_pred --EEEEEChhh-hchHHHHHHHHHH
Confidence 599999998 7899999988763
No 21
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=99.97 E-value=1.5e-29 Score=233.84 Aligned_cols=218 Identities=14% Similarity=0.081 Sum_probs=158.2
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEe
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig 101 (319)
.|++|||+|||+++++++|. +|+++.+.+.++ .+++++++.+.+.++ + .++.+|||+
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~---------~G~il~~~~~~t-----~~~~~~l~~i~~~~~----~-----~~i~gigi~ 59 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE---------DGTIIDRIEFPT-----XMPDETIEXVIQYFS----Q-----FSLQAIGIG 59 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT---------TSCEEEEEEEEC-----CCHHHHHHHHHHHHT----T-----SCCSEEEEE
T ss_pred cEEEEEEECcceeEEEEEEC---------CCcEEEEEEecC-----CChHHHHHHHHHHhc----c-----CCceEEEEE
Confidence 47999999999999999999 999999887754 246666666655443 1 268999999
Q ss_pred ecCCCCchh-----------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCCCeEEEEECcccee
Q 020972 102 VSGVNHPTD-----------------QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKLHGCVLIAGTGTIA 159 (319)
Q Consensus 102 ~pG~~~~~~-----------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-----~g~~~~v~v~~GTGigg 159 (319)
+||+++.+. +++|++.|+++|+ +||+++||+|+++++|. ++.++++|+++|||+|+
T Consensus 60 ~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtGiG~ 137 (302)
T 3epq_A 60 SFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMX--IPVGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTGIGA 137 (302)
T ss_dssp ECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHC--SCEEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEE
T ss_pred eceeeccccccccccEEecCCCCCccCCChHHHHHHHhC--CCEEEechhHHHHHHHHHhCCCCCCCcEEEEEECCceEE
Confidence 999976421 2589999999997 99999999999999873 35689999999999955
Q ss_pred EeEecCCcEEe---eCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhH-HHHHHHcCCCChhhHHHHhccCCChH
Q 020972 160 YGFTEDGRDAR---AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLT-SNILSTLELSSPDELIGWTYVDPSWA 235 (319)
Q Consensus 160 ~gii~dG~~~r---aGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~-~~~~~~~~~~~~~~l~~~~~~~~~~~ 235 (319)
|+++||++++ +|++||+..+... .++..+.|... .|++.+. +...+.+.....
T Consensus 138 -gii~~G~l~~G~~agEiGh~~v~~~~---------------~~~~~~~C~~~~gclE~~~---S~~al~~~~~~~---- 194 (302)
T 3epq_A 138 -GAIVEGRLLQGLSHPEMGHIYIRRHP---------------DDVYQGXCPYHGDCFEGLA---SGPAIEARWGXK---- 194 (302)
T ss_dssp -EEEETTEECCSSSCCCGGGCCCCCCT---------------TCCCCCSBTTTBSSHHHHH---SHHHHHHHHSSC----
T ss_pred -EEEECCEEcccCCCCccceEEEecCC---------------CCCcCcccCCCCcchhhhC---CHHHHHHHhhcc----
Confidence 7999999987 6788887654221 01112223222 2333333 344444433210
Q ss_pred HHhchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHh
Q 020972 236 RIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLI 315 (319)
Q Consensus 236 ~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~ 315 (319)
.+.+ +.+.+++++++++||.++++++++||| +.|||+|+++ +..+ |++++.
T Consensus 195 -----~~~~--------~~~~~~~~~~~~~La~~i~nl~~~ldP--------------e~IviGGgi~-~~~~-l~~~i~ 245 (302)
T 3epq_A 195 -----AADL--------SDIAQVWELEGYYIAQALAQYILILAP--------------XXIILGGGVM-QQXQ-VFSYIY 245 (302)
T ss_dssp -----GGGG--------TTCHHHHHHHHHHHHHHHHHHHHHTCC--------------SCEEEESSGG-GCTH-HHHHHH
T ss_pred -----cccc--------cchHHHHHHHHHHHHHHHHHHHHHHCc--------------hhhhcCchhh-hhHH-HHHHHH
Confidence 0001 114678999999999999999999998 4899999998 5665 777776
Q ss_pred h
Q 020972 316 E 316 (319)
Q Consensus 316 ~ 316 (319)
+
T Consensus 246 ~ 246 (302)
T 3epq_A 246 Q 246 (302)
T ss_dssp H
T ss_pred H
Confidence 5
No 22
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=99.97 E-value=9.5e-29 Score=231.28 Aligned_cols=240 Identities=13% Similarity=-0.035 Sum_probs=159.9
Q ss_pred CCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEE
Q 020972 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (319)
Q Consensus 20 m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Ig 99 (319)
.+.|+||||+|||+++++++|.. +|+++.+.+.++... .. +.+.+++++++.+ .++.+||
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~dl~--------~g~i~~~~~~~~~~~--~~-------~~~~i~~~~~~~~---~~i~gig 71 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCDIA--------SGEISQAKTYSGLDY--PS-------LEAVIRVYLEEHK---VEVKDGC 71 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEETT--------TCCEEEEEEEEGGGC--SC-------HHHHHHHHHHHSC---CCCCEEE
T ss_pred CCCEEEEEEechhheEEEEEECC--------CCcEEEEEEecCCCc--CC-------HHHHHHHHHHhcC---CCccEEE
Confidence 35799999999999999999941 688887766543211 12 3344455555543 3688999
Q ss_pred EeecCCCCchh--------HHHHHHHHHhhCCCCce-EEEeCcHHHHHHhhc---------------CCCCCeEEEEECc
Q 020972 100 LAVSGVNHPTD--------QQRILNWLRDIFPGNVR-LYVHNDALAALASGT---------------MGKLHGCVLIAGT 155 (319)
Q Consensus 100 ig~pG~~~~~~--------~~~l~~~L~~~~~~~~p-v~v~NDa~aa~~g~~---------------~g~~~~v~v~~GT 155 (319)
||+||+++... .++ .+.|+++|+ .| |+|+||+|+++++|. ++.++++||++||
T Consensus 72 i~~pG~vd~~~~~~~nl~w~~~-~~~l~~~~~--~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GT 148 (332)
T 1sz2_A 72 IAIACPITGDWVAMTNHTWAFS-IAEMKKNLG--FSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGT 148 (332)
T ss_dssp EEESSCCCSSEECCSSSCCCEE-HHHHHHHHT--CSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESS
T ss_pred EEEeCceeCCEEeeeCCCCcCC-HHHHHHHhC--CCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCc
Confidence 99999987421 135 578899997 87 999999999999984 2347899999999
Q ss_pred cceeEeEecCCc---EEeeCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhcc--
Q 020972 156 GTIAYGFTEDGR---DARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYV-- 230 (319)
Q Consensus 156 Gigg~gii~dG~---~~raGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~-- 230 (319)
|+|+ |+++||+ ...+||+||+.-+.....++-. ++. .....++.| .|.+. +...+.+.+..
T Consensus 149 GiG~-giv~~g~~G~~g~agE~GH~~v~~~~~~~~~l--~~~-~c~~~g~gc--------lE~~~--S~~~l~~~~~~~~ 214 (332)
T 1sz2_A 149 GLGV-AHLVHVDKRWVSLPGEGGHVDFAPNSEEEAII--LEI-LRAEIGHVS--------AERVL--SGPGLVNLYRAIV 214 (332)
T ss_dssp SEEE-EEEEEETTEEEEEECCGGGSBCCCCSHHHHHH--HHH-HHHHSSSCB--------GGGTS--SHHHHHHHHHHHH
T ss_pred cceE-EEEecCCCCeeeCCCCccccCcCCCChHHHHH--HHH-HHhccCCcc--------hhhhc--cHHHHHHHHHHHh
Confidence 9955 7888875 2348999998765443221110 000 000112111 11111 22333222110
Q ss_pred --CCChHHHhchhHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhccccccc-EEEEcchhhhc
Q 020972 231 --DPSWARIAALVPVVVSCAEAG-DEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVP-LLMENILFLLS 306 (319)
Q Consensus 231 --~~~~~~~a~~~~~v~~~A~~G-D~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~-ivl~Gg~~~~~ 306 (319)
... ......++.|+++|++| |+.|++++++++++||..++++++.||| +. |||+||++...
T Consensus 215 ~~~~~-~~~~~~~~~i~~~a~~G~D~~A~~~~~~~~~~Lg~~i~~l~~~l~P--------------~~gvvigGGi~~~~ 279 (332)
T 1sz2_A 215 KADNR-LPENLKPKDITERALADSCTDCRRALSLFCVIMGRFGGNLALNLGT--------------FGGVFIAGGIVPRF 279 (332)
T ss_dssp HHTTC-CCCCCCHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHTC--------------TTEEEEECSSSGGG
T ss_pred hccCC-CccCCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC--------------CeEEEEEChhhhhH
Confidence 000 00011367899999999 9999999999999999999999999998 35 99999998444
Q ss_pred HHHHH
Q 020972 307 WLVVF 311 (319)
Q Consensus 307 ~~~~~ 311 (319)
+++|+
T Consensus 280 ~~~l~ 284 (332)
T 1sz2_A 280 LEFFK 284 (332)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 66665
No 23
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=99.96 E-value=1.5e-29 Score=240.30 Aligned_cols=249 Identities=14% Similarity=0.015 Sum_probs=173.5
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEe
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig 101 (319)
.|+||||+|||+++++++|... ..+|+++.+.+..++ .+++.+++.|.+.++++.... +.++.+||||
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~-----~~~g~il~~~~~~~~----~~~~~~~~~i~~~i~~~~~~~---~~~i~gigi~ 96 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGK-----NDSVHACVTRYSMKR----KDITEIIEFFNEIIELMPASV---MKRVKAGVIN 96 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECG-----GGCEEEEEEEEECTT----CBGGGHHHHHHHHHHHSCHHH---HTTEEEEEEE
T ss_pred CeEEEEEEccccEEEEEEeccc-----CCCccEEEEeeecCC----CCHHHHHHHHHHHHHHHhhcc---cccccEEEEE
Confidence 5899999999999999998500 003788887762232 256777778877777654432 2468899999
Q ss_pred ecCCCCch---------hH-HHHHHHHHhhCCCCc-eEEEeCcHHHHHHh---------------hc-C-----------
Q 020972 102 VSGVNHPT---------DQ-QRILNWLRDIFPGNV-RLYVHNDALAALAS---------------GT-M----------- 143 (319)
Q Consensus 102 ~pG~~~~~---------~~-~~l~~~L~~~~~~~~-pv~v~NDa~aa~~g---------------~~-~----------- 143 (319)
+||+++.. .+ +++++.+++.|+ . ||+++||+|+++++ +. +
T Consensus 97 ~pG~vd~g~v~~~~~~~~~~~~l~~~l~~~~~--~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~~ 174 (373)
T 2q2r_A 97 VPGPVTGGAVGGPFNNLKGIARLSDYPKALFP--PGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEP 174 (373)
T ss_dssp ESSCEETTTEECCCSSSBSCEEGGGSCTTTSC--TTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSC
T ss_pred eeccccCCEEeccCCCCCCcCCHHHHHHHhcC--CCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccCC
Confidence 99997541 12 377888888787 7 99999999999998 43 2
Q ss_pred -C----CCCeEEEEECccceeEeEecCCcEEe-----eCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHH
Q 020972 144 -G----KLHGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNIL 213 (319)
Q Consensus 144 -g----~~~~v~v~~GTGigg~gii~dG~~~r-----aGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~ 213 (319)
| .++++|+++|||+| +|++.||++++ +|||||+..+.++.|++|+..++.. .... +++
T Consensus 175 ~g~~~~~~~~~~v~~GTGiG-~gii~~g~l~~G~~~~aGE~Gh~~~~~~~~c~cg~~l~~~~----~~~g-------~lE 242 (373)
T 2q2r_A 175 AGSVIGRGRCLVLAPGTGLG-SSLIYYNPPMNQHIVVPLELGSQTLPMRKDIDYIQTLHAEL----KLFP-------NYE 242 (373)
T ss_dssp TTSSCCSSCEEEEEESSSEE-EEEEEECC---CEEEEEECGGGSBCCCSSCHHHHHHHHHHH----TSCC-------BHH
T ss_pred CcCcCCCCCEEEEEeCCcee-EEEEecCcccCCCcccccccceeecCCCCCcchhHHHHHHh----hccc-------cHh
Confidence 3 37899999999995 57999998764 8999999887555589998654321 1111 122
Q ss_pred HHcCCCChhhHHHHhcc--CCChHHHhchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhccc
Q 020972 214 STLELSSPDELIGWTYV--DPSWARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILK 291 (319)
Q Consensus 214 ~~~~~~~~~~l~~~~~~--~~~~~~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~ 291 (319)
... +...+.+.... ..... ...++.|+++|++||+.|++++++++++|+..++++++.|||
T Consensus 243 ~~~---S~~~l~~~~~~~~~~~~~--~~~~~~i~~~a~~gD~~a~~~l~~~~~~L~~~i~~l~~~l~p------------ 305 (373)
T 2q2r_A 243 NMV---SGAGLEFHYRQVVRGSRP--PCSAGEIAKLASEGDANACKAMKKYHEYLMRVGSEASMALLP------------ 305 (373)
T ss_dssp HHS---SHHHHHHHHHHHHTTSSC--CCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCC------------
T ss_pred Hhc---CHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHCC------------
Confidence 222 23333222110 00000 013678999999999999999999999999999999999998
Q ss_pred ccccEEEEcchhhhcHHHHHH--HHhh
Q 020972 292 EKVPLLMENILFLLSWLVVFL--KLIE 316 (319)
Q Consensus 292 ~~~~ivl~Gg~~~~~~~~~~~--~~~~ 316 (319)
+.|||+||.+... +.|++ ++.+
T Consensus 306 --~~IvlgGG~~~~~-~~~~~~~~i~~ 329 (373)
T 2q2r_A 306 --LTIVLVGDNIVNN-AFFYRNPQNLK 329 (373)
T ss_dssp --SEEEECSHHHHHT-HHHHHSHHHHH
T ss_pred --CEEEEeCChHhCc-hhhhcchhHHH
Confidence 3688888855355 77777 5443
No 24
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=99.95 E-value=9.2e-29 Score=235.62 Aligned_cols=242 Identities=15% Similarity=0.123 Sum_probs=172.9
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHH---HHHHHHHHHHcCCCccccceE
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETI---EKVMADALLKSGSNRSAVRAV 98 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i---~~~i~~~l~~~~~~~~~i~~I 98 (319)
+++||||+|+|+++++++|. + +++.+.+.+.......+++.+++.+ .+.+.+++++.+....++.+|
T Consensus 2 ~~vlgidiGgt~ik~al~d~---------~-~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~gI 71 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFED---------E-RMVKMQNFSHSPDELGRFQKILDQLEFREKIARQFVEETGYSLSSFSAF 71 (381)
T ss_dssp CEEEEEEECSSEEEEEEEET---------T-EEEEEEEEECCHHHHHTCSSGGGGHHHHHHHHHHHHHTTTCCGGGCSEE
T ss_pred CeEEEEECCccceeEEEEec---------c-hheeeeecccCcccccchhhHHHHHHHHHHHHHHHHHHcCCCccCceEE
Confidence 48999999999999999998 6 8888877654211000223344555 777888887776666689999
Q ss_pred EEeecCCCCchh--------------------------HHHHHHHHHhhCCCCceEEEeCcHH---------HHHH----
Q 020972 99 CLAVSGVNHPTD--------------------------QQRILNWLRDIFPGNVRLYVHNDAL---------AALA---- 139 (319)
Q Consensus 99 gig~pG~~~~~~--------------------------~~~l~~~L~~~~~~~~pv~v~NDa~---------aa~~---- 139 (319)
+++||++++.. ..++.+.|++.|+ +||+|+||+| ++++
T Consensus 72 -i~~pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~--~Pv~v~NDan~~~~~~~a~aaalp~~~ 148 (381)
T 1saz_A 72 -VSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETG--VPAYVVDPVVVDEMEDVARVSGHPNYQ 148 (381)
T ss_dssp -EEECCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHC--CCEEEESCTTBCCCCGGGTBCSSTTCB
T ss_pred -EecCCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcC--CCEEEeCCCccccCcHHHHHcCCcchh
Confidence 99999876421 3578888999997 8999999999 8877
Q ss_pred -------------hh-c-----CCCC--CeEEEEECccceeEeEecCCcEEe-----eCCCCCccCCc-CChHHHHH--H
Q 020972 140 -------------SG-T-----MGKL--HGCVLIAGTGTIAYGFTEDGRDAR-----AAGAGPILGDW-GSGYGIAA--Q 190 (319)
Q Consensus 140 -------------g~-~-----~g~~--~~v~v~~GTGigg~gii~dG~~~r-----aGg~Ghl~gd~-Gsa~~iG~--~ 190 (319)
++ . ++.+ +++++++|||+++ |++.||++++ +|+ ||+..+. |. +.+|. .
T Consensus 149 r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGiG~-g~i~~G~~~~G~~g~agE-Gh~~~~~~g~-c~cg~l~~ 225 (381)
T 1saz_A 149 RKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGISI-AAHRKGRVIDVNNALDGD-GPFTPERSGT-LPLTQLVD 225 (381)
T ss_dssp CCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSEEE-EEEETTEEEEECCGGGTC-SSCCSSCCCS-CCHHHHHH
T ss_pred hhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCcEE-EEEECCEEEEecCCCCCC-cceeeccCCC-CCCcHHHH
Confidence 66 2 2345 8999999999955 7889999987 567 8887643 32 44443 2
Q ss_pred HHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHH--hchhHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 020972 191 ALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARI--AALVPVVVSCAEAGDEVANKILQDSVEELAL 268 (319)
Q Consensus 191 ~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~ 268 (319)
.+ .+... +...+.+.+......... ....+.|++++++||+.|++++++++++|+.
T Consensus 226 gc------~e~~~----------------S~~~l~~~~~~~~g~~~~~~~~~~~~i~~~a~~gd~~a~~~l~~~~~~la~ 283 (381)
T 1saz_A 226 LC------FSGKF----------------TYEEMKKRIVGNGGLVAYLGTSDAREVVRRIKQGDEWAKRVYRAMAYQIAK 283 (381)
T ss_dssp HH------TSSCC----------------CTTGGGSTTTTSCTHHHHHSCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HH------HHhCC----------------CHHHHHHHHHhccCccccccCCCHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 21 11111 222232222111000000 1236789999999999999999999999999
Q ss_pred HHHHHHHHh--cccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 269 SVKAVVQRL--SLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 269 ~la~li~~l--~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
.++++++.| || +.|||+||+. .+.+.+++++.+
T Consensus 284 ~i~~l~~~l~~~p--------------~~IvlgGgi~-~~~~~l~~~i~~ 318 (381)
T 1saz_A 284 WIGKMAAVLKGEV--------------DFIVLTGGLA-HEKEFLVPWITK 318 (381)
T ss_dssp HHHHHHHHTTTCC--------------SEEEEEEGGG-GCTTTHHHHHHH
T ss_pred HHHHHHHHhcCCC--------------CEEEEeCcCc-cChHHHHHHHHH
Confidence 999999999 77 5899999998 566667777765
No 25
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=99.94 E-value=1.1e-26 Score=210.93 Aligned_cols=204 Identities=17% Similarity=0.063 Sum_probs=150.5
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCC-CCeEEE-EecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEE
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDP-LPVLAR-AAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~-G~il~~-~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Ig 99 (319)
.|+||||+|+|+++++++|. + |+++.+ .+.++ +. ..+++++++.+.+.+++++++... ..++.+||
T Consensus 12 ~~~lgidiggt~i~~~l~dl---------~~g~i~~~~~~~~~-~~-~~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~ig 79 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDL---------KKGKLLGERFRVPT-PQ-PATPESVAEAVALVVAELSARPEA-PAAGSPVG 79 (267)
T ss_dssp CCEEEEEECSSEEEEEEEET---------TTTEEEEEEEEEEC-CS-SCCHHHHHHHHHHHHHHHHTSTTC-CCTTCCEE
T ss_pred CEEEEEEECCCEEEEEEEEC---------CCCeEEEEEEecCC-Cc-cCCHHHHHHHHHHHHHHHHHhccc-cCccceEE
Confidence 47999999999999999998 6 777743 34333 22 146888999999999988764331 23456899
Q ss_pred EeecCCCCc-------h---h--HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-----CCCC-CeEEEEECccceeEe
Q 020972 100 LAVSGVNHP-------T---D--QQRILNWLRDIFPGNVRLYVHNDALAALASGT-----MGKL-HGCVLIAGTGTIAYG 161 (319)
Q Consensus 100 ig~pG~~~~-------~---~--~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-----~g~~-~~v~v~~GTGigg~g 161 (319)
||+||+++. . . +.+|++.|+++|+ +||+++||+|+++++|. ++.+ +++|+++|||+| +|
T Consensus 80 i~~pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~--~pV~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtGIG-~g 156 (267)
T 1woq_A 80 VTFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLG--RPVEVINDADAAGLAEARYGAGAGVKGTVLVITLGTGIG-SA 156 (267)
T ss_dssp EEESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHT--SCEEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSSEE-EE
T ss_pred EEccceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHC--CCEEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcceE-EE
Confidence 999998641 1 1 2578999999997 89999999999999874 2334 478999999984 58
Q ss_pred EecCCcEEeeCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhchh
Q 020972 162 FTEDGRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALV 241 (319)
Q Consensus 162 ii~dG~~~raGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~ 241 (319)
++.||+++|.||+||+..+.. | ++.+. +...+
T Consensus 157 iv~~G~l~~GgEiGh~~v~~~-----------------------~-----lE~~~---S~~~l----------------- 188 (267)
T 1woq_A 157 FIFDGKLVPNAELGHLEIDGH-----------------------D-----AETKA---SAVAR----------------- 188 (267)
T ss_dssp EEETTEEETTCCGGGCEETTE-----------------------E-----HHHHH---SHHHH-----------------
T ss_pred EEECCEEccCceeeeEEecCc-----------------------c-----HHHHh---CHHHH-----------------
Confidence 999999999999999875421 0 11111 11110
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHH
Q 020972 242 PVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKL 314 (319)
Q Consensus 242 ~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~ 314 (319)
.+ . ...+++++++|+..++++++.||| +.|||+|+++ ..++.|++++
T Consensus 189 ---~~---~-----~~~~~~~~~~l~~~l~~l~~~ldP--------------~~IvlgG~i~-~~~~~~~~~~ 235 (267)
T 1woq_A 189 ---ER---D-----GLSWDEYSVLLQRYFSHVEFLFSP--------------ELFIVGGGIS-KRADEYLPNL 235 (267)
T ss_dssp ---HH---T-----TCCHHHHHHHHHHHHHHHHHHHCC--------------SEEEEESGGG-GGGGGTGGGC
T ss_pred ---hh---c-----chhHHHHHHHHHHHHHHHHHHcCC--------------CEEEEeChhh-cccHHHHHhh
Confidence 00 0 113678899999999999999998 4799999998 6777776654
No 26
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=99.94 E-value=2.5e-27 Score=209.75 Aligned_cols=190 Identities=12% Similarity=0.001 Sum_probs=136.3
Q ss_pred CCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceE
Q 020972 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAV 98 (319)
Q Consensus 19 ~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~I 98 (319)
+|+.|++|||+|||+++ ++|. +|++.. +.++. . ..+++++++.+.+.+++ . ++.+|
T Consensus 3 ~~~~~~lgiDIGGT~i~--~~d~---------~g~~~~--~~~t~-~-~~~~~~~~~~i~~~i~~----~-----~i~gi 58 (226)
T 3lm2_A 3 AEDQTVLAIDIGGSHVK--IGLS---------TDGEER--KVESG-K-TMTGPEMVAAVTAMAKD----M-----TYDVI 58 (226)
T ss_dssp GGGCCEEEEEECSSEEE--EEET---------TTCCEE--EEECC-T-TCCHHHHHHHHHHHTTT----C-----CCSEE
T ss_pred CcCCEEEEEEECCCEEE--EEEC---------CCCEEE--EEECC-C-CCCHHHHHHHHHHHHHh----C-----CCCEE
Confidence 34568999999999999 4687 788733 33222 2 24677777766655432 2 68899
Q ss_pred EEeecCCCCchh-------------HHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCeEEEEECccceeEeEecC
Q 020972 99 CLAVSGVNHPTD-------------QQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTED 165 (319)
Q Consensus 99 gig~pG~~~~~~-------------~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g~~~~v~v~~GTGigg~gii~d 165 (319)
||++||+++++. +.+| +++|+ .||+++||+|++++++... ++++|+++|||+|+ |++.|
T Consensus 59 gi~~pG~Vd~~~~~~~~~nl~~~w~~~~l----~~~~~--~pv~v~NDanaaalge~~~-~~~~~l~~GtGiG~-gii~~ 130 (226)
T 3lm2_A 59 AMGYPGPVVHNKPLREPVNLGEGWVGYDY----EGAFG--RPVRIVNDALMQAIGSYNG-GRMLFLGLGTGLGA-AMIVE 130 (226)
T ss_dssp EEEESSCEETTEECSCCTTSCSCCTTCCH----HHHHT--SCEEEEEHHHHHHHHHCCS-SEEEEEEESSSEEE-EEEET
T ss_pred EEEEEeEEECCeEEEECCcCCccccCCch----HHhcC--CeEEEEEHHHHHHHHHhhc-CcEEEEEeCCceEE-EEEEC
Confidence 999999976431 1234 45676 8999999999999998754 68999999999954 79999
Q ss_pred CcEEeeCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhchhHHHH
Q 020972 166 GRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVV 245 (319)
Q Consensus 166 G~~~raGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~v~ 245 (319)
|++++ ||+||+.-+.+ + |++.+. +... +.
T Consensus 131 G~l~~-GEiGH~~v~~~------------------g---------clE~~~---s~~a--------------------l~ 159 (226)
T 3lm2_A 131 NVAQP-MEIAHLPYRKG------------------K---------TYEHYV---SEAY--------------------RE 159 (226)
T ss_dssp TEEEE-ECCTTSEEETT------------------E---------EHHHHT---CHHH--------------------HH
T ss_pred CEEee-eeeeeEEecCC------------------C---------cHHHHh---CHHH--------------------HH
Confidence 99998 99999975431 0 122222 1111 11
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 246 SCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 246 ~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
+. ++ ++++++|++++++++++||| +.|||+|++. +.++.|++++.+
T Consensus 160 ~~---~~-------~~~~~~L~~~la~l~~~~dP--------------~~IVlGG~~~-~~~~~~~~~i~~ 205 (226)
T 3lm2_A 160 KK---GN-------AKWQKRVQDVVERLSAALEP--------------DEVVIGGGNV-ERLENLPPKCRR 205 (226)
T ss_dssp HH---CH-------HHHHHHHHHHHHHHHHHHCC--------------SEEEEESGGG-GGCCCCCTTEEE
T ss_pred HH---HH-------HHHHHHHHHHHHHHHHHHCC--------------CEEEEeChhh-hhhhHHHHHHHH
Confidence 11 11 57788999999999999998 5899999998 788877666544
No 27
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=99.89 E-value=6.1e-22 Score=191.83 Aligned_cols=265 Identities=15% Similarity=0.128 Sum_probs=167.8
Q ss_pred CCcEEEEEEcCccceeEEEEeCccCCCCCCCCC-C----e-EEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 020972 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPL-P----V-LARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRS 93 (319)
Q Consensus 20 m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G-~----i-l~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~ 93 (319)
..+++|+||+|||++|++++++ +| + + ..+.+.|+ +....+.+++++.|++.+++++++.+...
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l---------~G~~~~~~i~~~~~~ip~-~~~~~~~~~lfd~Ia~~i~~~l~~~~~~~- 134 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTL---------EGKGKSPRIQERTYCIPA-EKMSGSGTELFKYIAETLADFLENNGMKD- 134 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEE---------CC-CCCCEEEEEEECCCT-TTTTSBHHHHHHHHHHHHHHHHHHTTCCS-
T ss_pred ccceEEEEEeCCCeEEEEEEec---------CCCCcceEEEEEEEecCC-cccCCCHHHHHHHHHHHHHHHHHhcCCCc-
Confidence 3578999999999999999999 77 5 4 34444443 32234678999999999999999877543
Q ss_pred ccceEEEeecCCCCc---hh----------------HHHHHHHHHhhC---CCCceE---EEeCcHHHHHHhhc-CCCCC
Q 020972 94 AVRAVCLAVSGVNHP---TD----------------QQRILNWLRDIF---PGNVRL---YVHNDALAALASGT-MGKLH 147 (319)
Q Consensus 94 ~i~~Igig~pG~~~~---~~----------------~~~l~~~L~~~~---~~~~pv---~v~NDa~aa~~g~~-~g~~~ 147 (319)
+...+|+++|++++. .. +.++.+.|++.+ + .|| .|.||+++++++++ .+.++
T Consensus 135 ~~~~lG~tfsfPv~q~~~~~G~l~~wtKgf~~~~~~g~dv~~~L~~al~r~~--l~v~v~al~NDtv~tlla~~y~~~~~ 212 (451)
T 1bdg_A 135 KKFDLGFTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKRE--LNVKCVAVVNDTVGTLASCALEDPKC 212 (451)
T ss_dssp SCEEEEEEECSCEEEETTTEEEECCCCTTCCCBTCTTSBHHHHHHHHHHTTT--CCEEEEEEECHHHHHHHHHHTTCTTE
T ss_pred cccceEEEEeeEeccccCCCeEEeccccccCCCCCCCCcHHHHHHHHHHHcC--CCcceEEEEEchHHHHHHhcccCCCc
Confidence 347899999999764 11 236777777776 4 677 99999999999874 56778
Q ss_pred eEEEEECccceeEeEecCCcE------------EeeCCCCCccCCcC-----------------------------ChHH
Q 020972 148 GCVLIAGTGTIAYGFTEDGRD------------ARAAGAGPILGDWG-----------------------------SGYG 186 (319)
Q Consensus 148 ~v~v~~GTGigg~gii~dG~~------------~raGg~Ghl~gd~G-----------------------------sa~~ 186 (319)
.+.+++|||+++ +++.+++. .-..+||+. ++++ |+..
T Consensus 213 ~iglIlGTG~na-~yve~~~~i~~~~g~~~g~m~In~EwG~f-~~~~~~~~p~t~~D~~lD~~s~~pg~q~~Ek~~SG~y 290 (451)
T 1bdg_A 213 AVGLIVGTGTNV-AYIEDSSKVELMDGVKEPEVVINTEWGAF-GEKGELDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMY 290 (451)
T ss_dssp EEEEEESSSEEE-EEEEETTTCGGGCSCSSSEEEEECCGGGT-TTTSTTTTTCCHHHHHHHHTSSSTTSCTTHHHHSHHH
T ss_pred EEEEEEeCCcce-EEEEcCccccCcCCCccCcEEEecCcccC-CCcccccCCCCcchhhhhhcCCCCCcccchhhhhhhH
Confidence 999999999966 68887754 234566654 1111 2222
Q ss_pred HHHHHHHHHHHHhc-CCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHhchhHHHHHH-HH-----cCC-----HH
Q 020972 187 IAAQALTAVIRAYD-GRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIAALVPVVVSC-AE-----AGD-----EV 254 (319)
Q Consensus 187 iG~~~~~~~~~~~d-g~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~v~~~-A~-----~GD-----~~ 254 (319)
+|...-....+..+ +..-.......+.+.+.++ ...++.+..+.. ..+ +.++.++++ +. .+| ++
T Consensus 291 Lgel~R~~l~~~~~~~~lf~~~~~~~l~~~~~l~--t~~ls~i~~d~~-~~~-~~~~~i~~~~~~~~~~~~~d~~~~~~v 366 (451)
T 1bdg_A 291 LGELVRHIIVYLVEQKILFRGDLPERLKVRNSLL--TRYLTDVERDPA-HLL-YNTHYMLTDDLHVPVVEPIDNRIVRYA 366 (451)
T ss_dssp HHHHHHHHHHHHHHTTSSGGGCCCSGGGSTTCSC--TTHHHHHTTCCT-TCC-HHHHHHHHHTSCCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccccccccchHhhcCCCccc--hHHHhhhhccCc-cch-HHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 22211110000000 0000000000000000110 011111111110 011 124667776 43 678 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 255 ANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 255 A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
|..|++++++++|.+++++++.++| ++..|+++||++ +..+.|.+++.|
T Consensus 367 a~~V~~RaA~lla~~ia~i~~~~~~------------~~~~V~i~Ggv~-~~~~~~~~~l~~ 415 (451)
T 1bdg_A 367 CEMVVKRAAYLAGAGIACILRRINR------------SEVTVGVDGSLY-KFHPKFCERMTD 415 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC------------SEEEEEEESHHH-HHCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC------------CceEEEEeCchh-cCchhHHHHHHH
Confidence 9999999999999999999999998 345788999998 778888877765
No 28
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=99.89 E-value=2.2e-22 Score=194.97 Aligned_cols=264 Identities=7% Similarity=-0.025 Sum_probs=168.5
Q ss_pred ccCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCe---EEEEecCCC-CccccCHHHHHHHHHHHHHHHHHHcCCCc
Q 020972 17 ESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPV---LARAAAGCS-NHNSVGEDAARETIEKVMADALLKSGSNR 92 (319)
Q Consensus 17 ~~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~i---l~~~~~~~~-~~~~~~~~~~~~~i~~~i~~~l~~~~~~~ 92 (319)
+....+++||||+|||++|+++++. +|++ +.+.+.+.. +....+.+++++.|.+.+++++++.+...
T Consensus 56 ~G~E~G~~laiDlGGTnirv~lV~~---------~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~~~~~~~ 126 (457)
T 2yhx_A 56 SGAQAGSFLAIVMGGGDLEVILISL---------AGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSSXEFSSX 126 (457)
T ss_dssp CSCCCEEEEEEEECSSEEEEEEEEE---------ETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHHHHTSSC
T ss_pred CCCccceEEEEEeCCCeEEEEEEEe---------CCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHhhccccc
Confidence 3344568999999999999999999 8988 444443321 11113678999999999999998754322
Q ss_pred cc--cceEEEeecCC-CCch--------hHH------HHHHHHHhhC---CCCce---EEEeCcHHHHHHhhc-CCCCCe
Q 020972 93 SA--VRAVCLAVSGV-NHPT--------DQQ------RILNWLRDIF---PGNVR---LYVHNDALAALASGT-MGKLHG 148 (319)
Q Consensus 93 ~~--i~~Igig~pG~-~~~~--------~~~------~l~~~L~~~~---~~~~p---v~v~NDa~aa~~g~~-~g~~~~ 148 (319)
.+ ..++++++|+. .+.. +.+ ++.+.|++.+ + .| |.|+||+++++++++ ++.++.
T Consensus 127 ~~~~~lGi~fs~P~~q~~~~~g~l~~wtKgf~i~~~~~v~~~L~~~l~r~g--lpv~vval~NDa~~tll~e~~~~~~~~ 204 (457)
T 2yhx_A 127 AGSVPLGFTFXEAGAKEXVIKGQITXQAXAFSLAXLXKLISAMXNAXFPAG--DXXXSVADIXDSHGILXXVNYTDAXIK 204 (457)
T ss_dssp SSCEEEEEECCSCCCCSBTTCCBCSSCCTTCCCSSCSSBHHHHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHHCTTEE
T ss_pred ccccceeeEEEEEEEEeecCceEEEeeccCCCcchhHHHHHHHHHhHhhcC--CcceeEEEEecchhhccchhhcCCccE
Confidence 23 34555555554 2211 133 7888888877 5 67 999999999999874 677899
Q ss_pred EEEEECccceeEeEecCC----c------------EEeeCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHH
Q 020972 149 CVLIAGTGTIAYGFTEDG----R------------DARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNI 212 (319)
Q Consensus 149 v~v~~GTGigg~gii~dG----~------------~~raGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~ 212 (319)
+++++|||+++ +++.++ + ..-.+||||+- +++.- +-....+. ..|+..+.|+ +++
T Consensus 205 iglilGTGvgg-~~i~~~~~i~kl~~~~~~~~~g~~~in~EwG~f~-~~~~~--lp~t~~D~---~lD~~s~~pG--q~f 275 (457)
T 2yhx_A 205 MGIIFGSGVNA-AYWCDSTXIGDAADGGXXGGAGXMXICCDQSSFR-KAFPS--LPQIXYLX---TLNXXSPXAX--KTF 275 (457)
T ss_dssp EEEEESSSEEE-EEEECGGGSSCTTSCSSSCSSCCEEEECCCTTTT-TTCSS--SCCCHHHH---HHHHHSSCSC--CHH
T ss_pred EEEEECcEEEE-EEEECCCcccccccccccccCCceEEEEEcccCC-CCCCc--CCcccccc---ccccccCchH--HHH
Confidence 99999999966 688776 3 33488999973 32211 00001010 1111112222 233
Q ss_pred HHHcCCCChhhHHHH--------------------------------hccCCChHHHhchhHHHH-HHHH----cCC---
Q 020972 213 LSTLELSSPDELIGW--------------------------------TYVDPSWARIAALVPVVV-SCAE----AGD--- 252 (319)
Q Consensus 213 ~~~~~~~~~~~l~~~--------------------------------~~~~~~~~~~a~~~~~v~-~~A~----~GD--- 252 (319)
+.+.+-....++.+. +..+.. ..+ +.++.++ +.+. .+|
T Consensus 276 Ekm~SG~yLGel~R~il~~~~~~~~lf~~~~~~l~~~~~~~t~~ls~i~~d~~-~~l-~~~~~il~~~~~~~~t~~D~~~ 353 (457)
T 2yhx_A 276 XKNSXAKNXGQSLRDVLMXFKXXGQXHXXXAXSFXAANVENTSYPAKIQKLPH-FDL-RXXXDLFXGDQGIAXKTXMKXV 353 (457)
T ss_dssp HHHHCGGGHHHHHHHHHHHHHHTTSSSSSCCCSCCSTTCSCTHHHHHHHHCCS-SSC-HHHHHHHHHHHTCCCCHHHHHH
T ss_pred HHHhhhcCcHHHHHHHHHHHhcccccccccchhcccccCcChHHHHHHhcCCc-hhh-hHHHHHHHHHhCCCccchhhHH
Confidence 333321111111111 100000 000 1155666 6666 788
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 253 --EVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 253 --~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
++|..|.+++++.+|.+++++++.+++ ++..|++.||+ +..+.|.+.+.|
T Consensus 354 v~~ia~~V~~RaA~l~A~~iaai~~~~~~------------~~~~V~vdGsv--~~~p~f~~~l~~ 405 (457)
T 2yhx_A 354 VRRXLFLIAAYAFRLVVCXIXAICQKKGY------------SSGHIAAXGSX--RSYSGFSXNSAT 405 (457)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHTC------------SSEEEEEESTT--TTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCC------------CcEEEEEECCc--ccCchHHHHHHH
Confidence 999999999999999999999999997 34678889998 677888877764
No 29
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.88 E-value=1.1e-21 Score=204.81 Aligned_cols=272 Identities=15% Similarity=0.115 Sum_probs=165.6
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCC----e-EEEEecCCCCc-cccCHHHHHHHHHHHHHHHHHHcCCC
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLP----V-LARAAAGCSNH-NSVGEDAARETIEKVMADALLKSGSN 91 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~----i-l~~~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~~~~~ 91 (319)
....+++||||+|||++|+++++. +|+ + +.+.+.+.... ...+.+++++.|.+.+++++++.+..
T Consensus 74 G~E~G~~laiDlGGTnirv~lv~~---------~G~~~~~i~~~~~~~~ip~~~~~~~~~~lf~~Ia~~i~~~l~~~~~~ 144 (917)
T 1cza_N 74 GSEKGDFIALDLGGSSFRILRVQV---------NHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK 144 (917)
T ss_dssp SCCCEEEEEEEESSSSEEEEEEEE---------EEETTEEEEEEEEEECCCHHHHSSBHHHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCcceEEEEEeCCCeEEEEEEEe---------cCCCcceEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 334578999999999999999998 775 5 55555443211 11367899999999999998876543
Q ss_pred ccccceEEEeecCCCCc---h---------h-------HHHHHHHHHhhCC----C-CceEEEeCcHHHHHHhhc-CCCC
Q 020972 92 RSAVRAVCLAVSGVNHP---T---------D-------QQRILNWLRDIFP----G-NVRLYVHNDALAALASGT-MGKL 146 (319)
Q Consensus 92 ~~~i~~Igig~pG~~~~---~---------~-------~~~l~~~L~~~~~----~-~~pv~v~NDa~aa~~g~~-~g~~ 146 (319)
.+ ...+|+++|++.+. . . +.++.+.|++.+. . ..||.|+||+++++++++ .+.+
T Consensus 145 ~~-~~~lGi~fs~P~~q~~~~~G~l~~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~ 223 (917)
T 1cza_N 145 DK-KLPVGFTFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQH 223 (917)
T ss_dssp TS-CCCEEEEECSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTT
T ss_pred CC-cccEEEEEccccccCcCCceEEEecccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCC
Confidence 32 23567777776431 1 1 2366677766552 1 137999999999999874 5778
Q ss_pred CeEEEEECccceeEeEecCCc-----------EEeeCCCCCccCCcCChHHHHHHHHHHHHHHhcCC---C------CCc
Q 020972 147 HGCVLIAGTGTIAYGFTEDGR-----------DARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGR---G------PDT 206 (319)
Q Consensus 147 ~~v~v~~GTGigg~gii~dG~-----------~~raGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~---~------~~~ 206 (319)
+.+++++|||++| +++.||+ ...++||||+. +.+.-..+ ....+....+..+. . +..
T Consensus 224 ~~iglilGTGvng-g~i~~g~~i~~~~G~~g~~~in~E~G~f~-~~~~l~~~-~t~~D~~~dc~~g~pg~g~~Ek~~SG~ 300 (917)
T 1cza_N 224 CEVGLIIGTGTNA-CYMEELRHIDLVEGDEGRMCINTEWGAFG-DDGSLEDI-RTEFDRAIDAYSLNPGKQLFEKMVSGM 300 (917)
T ss_dssp EEEEEEESSSEEE-EEEEEGGGCTTSSCCSSEEEEECCGGGTT-TTTTTTTT-CCHHHHHHHHTSSSTTSSTTHHHHSHH
T ss_pred cEEEEEEECCcce-EEEecCcccccccCCCCceEEeccccccC-CccccccC-CCccccccccCCcCCCccHhHHHhhhh
Confidence 8999999999966 6888887 44577788762 11100000 00000000111111 0 001
Q ss_pred hhHHHHHH----H------c------------CCCChhhHHHHhccCCChHHHhchhHHHHHHH----HcCC-----HHH
Q 020972 207 MLTSNILS----T------L------------ELSSPDELIGWTYVDPSWARIAALVPVVVSCA----EAGD-----EVA 255 (319)
Q Consensus 207 ~l~~~~~~----~------~------------~~~~~~~l~~~~~~~~~~~~~a~~~~~v~~~A----~~GD-----~~A 255 (319)
.+.+.+.. . + .+ +...+ ..+. +. .... ..+..|++.+ .++| +.|
T Consensus 301 yLgel~r~~l~~~~~~~~~~~~~~~~~l~~~~~l-~t~~v-s~~~-~~-~~~~-~~~~~i~~~~~~~~~~~D~~~~~~~a 375 (917)
T 1cza_N 301 YLGELVRLILVKMAKEGLLFEGRITPELLTRGKF-NTSDV-SAIE-KN-KEGL-HNAKEILTRLGVEPSDDDCVSVQHVC 375 (917)
T ss_dssp HHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTSS-CHHHH-HHHT-CT-TTHH-HHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhccccccccccchhhcccccc-ChHHH-HHHh-cc-cccH-HHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 11111000 0 0 00 01111 1111 00 0111 1234567766 3555 999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh--cccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 256 NKILQDSVEELALSVKAVVQRL--SLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 256 ~~il~~a~~~Lg~~la~li~~l--~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
..+++++++++|.+|+++++.+ ||..+ ..+..|+++||++ +.++.|++++.+
T Consensus 376 ~~v~~raa~llA~gia~ii~~l~~dp~~~--------~~~~~IvigGgV~-~~~~~~~~~l~~ 429 (917)
T 1cza_N 376 TIVSFRSANLVAATLGAILNRLRDNKGTP--------RLRTTVGVDGSLY-KTHPQYSRRFHK 429 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCS--------SEEEEEEEECHHH-HHCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCccc--------CcceEEEECCchh-hccHHHHHHHHH
Confidence 9999999999999999999999 77211 1236899999999 888888888765
No 30
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.77 E-value=5.7e-18 Score=176.86 Aligned_cols=277 Identities=14% Similarity=0.098 Sum_probs=165.7
Q ss_pred ccCCCcEEEEEEcCccceeEEEEeCccCCCCCCCC-CC--eE----EEEecCCCCccccCHHHHHHHHHHHHHHHHHHcC
Q 020972 17 ESGGREVILGLDGGTTSTVCICMPVISMSDSLPDP-LP--VL----ARAAAGCSNHNSVGEDAARETIEKVMADALLKSG 89 (319)
Q Consensus 17 ~~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~-G~--il----~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~ 89 (319)
+....+.+|+||+|||++|++++++ + |+ ++ .+.+.| ......+.+++++.|.+.|.+++++.+
T Consensus 521 ~G~E~G~~lalDlGGTn~Rv~~V~l---------~~g~~~~~~~~~~~~~ip-~~~~~~~~~~lfd~Ia~~i~~~l~~~~ 590 (917)
T 1cza_N 521 DGTENGDFLALDLGGTNFRVLLVKI---------RSGKKRTVEMHNKIYAIP-IEIMQGTGEELFDHIVSCISDFLDYMG 590 (917)
T ss_dssp CSCCCEEEEEEEESSSSEEEEEEEE---------ECSTTCEEEEEEEEECCC-HHHHTSBHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcceEEEEEEECCCcEEEEEEEe---------CCCcceeEEeeeeEEecC-cccccCCHHHHHHHHHHHHHHHHHHcC
Confidence 3344568999999999999999998 5 54 54 233332 221123568899999999999998876
Q ss_pred CCccccceEEEeecCCCCch---------h----------HHHHHHHHHhhC----CC-CceEEEeCcHHHHHHhh-cCC
Q 020972 90 SNRSAVRAVCLAVSGVNHPT---------D----------QQRILNWLRDIF----PG-NVRLYVHNDALAALASG-TMG 144 (319)
Q Consensus 90 ~~~~~i~~Igig~pG~~~~~---------~----------~~~l~~~L~~~~----~~-~~pv~v~NDa~aa~~g~-~~g 144 (319)
....++ .+|+++|++++.. + +.++.+.|++.+ +. ..|+.|.||++++++++ +.+
T Consensus 591 ~~~~~l-~lG~tfsfPv~q~~i~~~~L~~WtKgf~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~ 669 (917)
T 1cza_N 591 IKGPRM-PLGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE 669 (917)
T ss_dssp CCSSCC-EEEEEECSCEEEEETTEEEECCCCTTCCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC
T ss_pred CCccce-eEEEEeeccccccccCccEECceecccccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC
Confidence 554444 8999999997531 1 235555555554 30 12899999999998886 467
Q ss_pred CCCeEEEEECccceeEeEecCCcEEe--eCCCCCccCCcCChHHHHH--------HHHHHHHHHh---------cCCCCC
Q 020972 145 KLHGCVLIAGTGTIAYGFTEDGRDAR--AAGAGPILGDWGSGYGIAA--------QALTAVIRAY---------DGRGPD 205 (319)
Q Consensus 145 ~~~~v~v~~GTGigg~gii~dG~~~r--aGg~Ghl~gd~Gsa~~iG~--------~~~~~~~~~~---------dg~~~~ 205 (319)
.++.+.+++|||+++ +++.+++.+. .|++|||..+...+ .+|. ...+..+... +-..+.
T Consensus 670 ~~~~iglIlGTG~na-~y~e~~~~i~~~~g~~g~m~In~EwG-~fg~~~~l~~~~T~~D~~~d~~s~~pG~q~~Ek~~SG 747 (917)
T 1cza_N 670 PTCEVGLIVGTGSNA-CYMEEMKNVEMVEGDQGQMCINMEWG-AFGDNGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISG 747 (917)
T ss_dssp TTEEEEEEESSSEEE-EEEEETTTCTTSSCCSSEEEEECCGG-GTTTTSTTTTTCCHHHHHHHHTSTTTTSCTTGGGTST
T ss_pred CCcEEEEEEeCCeeE-EEEEcCccccCcCCCcCcEEEecccc-cCCCcccccCCCCchhhhhhhcCCCCCCCchHHhhhH
Confidence 778999999999966 6888876432 24555554321100 1111 0000000000 000011
Q ss_pred chhHHHHHH----HcC--C----CCh----------hhHHHHhccCCChHHHhchhHHHHHHHH----cCC-----HHHH
Q 020972 206 TMLTSNILS----TLE--L----SSP----------DELIGWTYVDPSWARIAALVPVVVSCAE----AGD-----EVAN 256 (319)
Q Consensus 206 ~~l~~~~~~----~~~--~----~~~----------~~l~~~~~~~~~~~~~a~~~~~v~~~A~----~GD-----~~A~ 256 (319)
..+.+.+.. ... . ... ...++.+..+.. ... ..+.+++++. .+| ++|.
T Consensus 748 ~yLgel~R~il~~~~~~~~lf~~~~~~~l~~~~~~~t~~ls~ie~d~~--~~~-~~~~i~~~~~~~~~~~D~~~~~~ia~ 824 (917)
T 1cza_N 748 MYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRL--ALL-QVRAILQQLGLNSTCDDSILVKTVCG 824 (917)
T ss_dssp TTHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTCSCHHHHHHHTCSSC--CHH-HHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcccccccccccchhhccCCccchHHhhhhhcCcc--hhh-HHHHHHHHhCCCCChHHHHHHHHHHH
Confidence 111111110 000 0 000 001111111110 000 1345777765 678 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 257 KILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 257 ~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
.+.+++++.+|.+|+++++.++|.... ...+..|++.||++ +..+.|.+.+.|
T Consensus 825 ~v~~RaA~l~a~~iaai~~~~~~~~~~------~~~~~~V~vdGsv~-~~~p~f~~~~~~ 877 (917)
T 1cza_N 825 VVSRRAAQLCGAGMAAVVDKIRENRGL------DRLNVTVGVDGTLY-KLHPHFSRIMHQ 877 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC------SSEEEEEEEECHHH-HHCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccc------CccceEEEECCHHH-HcCcHHHHHHHH
Confidence 999999999999999999999872110 01125799999998 788888887765
No 31
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=99.53 E-value=9.3e-13 Score=127.86 Aligned_cols=133 Identities=13% Similarity=0.090 Sum_probs=96.5
Q ss_pred CCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCC-----eEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCc-
Q 020972 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLP-----VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNR- 92 (319)
Q Consensus 19 ~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~-----il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~- 92 (319)
...+.+|++|+|||++|++++++ +|+ +.....+|. +....+.+++++.|++.|.+++++.....
T Consensus 77 ~E~G~~LalDlGGTn~Rv~~V~l---------~g~~~~~~~~~~~~Ip~-~~~~~~~~~lfd~Ia~~i~~fl~~~~~~~~ 146 (485)
T 3o8m_A 77 KETGDFLALDLGGTNLRVVLVKL---------GGNHDFDTTQNKYRLPD-HLRTGTSEQLWSFIAKCLKEFVDEWYPDGV 146 (485)
T ss_dssp CCEEEEEEEEESSSEEEEEEEEE---------ESSSCEEEEEEEEECCT-TGGGSBHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred CcceEEEEEEecCCeEEEEEEEE---------CCCCceEEEEEEEecCc-hhccCCHHHHHHHHHHHHHHHHHHhccccc
Confidence 33468999999999999999998 665 444445433 33223478999999999999998875432
Q ss_pred cccceEEEeecCCCCchh-------------------HHHHHHHHHhhC---CCCce---EEEeCcHHHHHHhh-cCCCC
Q 020972 93 SAVRAVCLAVSGVNHPTD-------------------QQRILNWLRDIF---PGNVR---LYVHNDALAALASG-TMGKL 146 (319)
Q Consensus 93 ~~i~~Igig~pG~~~~~~-------------------~~~l~~~L~~~~---~~~~p---v~v~NDa~aa~~g~-~~g~~ 146 (319)
.+...+|+++|++.+... +.++.+.|++.+ + .| +.|.||++++++++ +.+.+
T Consensus 147 ~~~l~lGftfSfP~~q~~i~~g~li~wtKGF~i~~~~G~dv~~~L~~al~r~g--l~v~v~aivNDtv~tll~~~y~~~~ 224 (485)
T 3o8m_A 147 SEPLPLGFTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLN--IPINVVALINDTTGTLVASLYTDPQ 224 (485)
T ss_dssp SSCEEEEEEECSCEECSBTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTT--CCEEEEEEECHHHHHHHHHHHHCTT
T ss_pred ccccceEEEEeeeEEEcccCCEEEeeccccccCCCcCCccHHHHHHHHHHhcC--CCceEEEEEEcHHHHHHHHhhCCCC
Confidence 356678888888854210 235566666555 4 56 68999999998876 45667
Q ss_pred CeEEEEECccceeEeEec
Q 020972 147 HGCVLIAGTGTIAYGFTE 164 (319)
Q Consensus 147 ~~v~v~~GTGigg~gii~ 164 (319)
+.+.+++|||+++ +++.
T Consensus 225 ~~iglIlGTG~N~-~y~e 241 (485)
T 3o8m_A 225 TKMGIIIGTGVNG-AYYD 241 (485)
T ss_dssp EEEEEEESSSEEE-EEEE
T ss_pred cEEEEEEecCcce-EEEe
Confidence 8899999999977 4654
No 32
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=98.95 E-value=2.1e-07 Score=89.06 Aligned_cols=136 Identities=16% Similarity=0.083 Sum_probs=87.8
Q ss_pred ccCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEE-ecC-CCCccccCHHHHHHHHHHHHHHHHHHcCCCcc-
Q 020972 17 ESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA-AAG-CSNHNSVGEDAARETIEKVMADALLKSGSNRS- 93 (319)
Q Consensus 17 ~~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~-~~~-~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~- 93 (319)
+....+.+|++|+|||+.|++++++ .|.+.... ..+ |......+.+++++.|++.|.+++++.+....
T Consensus 54 ~G~E~G~~LAlDlGGTn~RV~~V~l---------~g~~~~~~~~~~ip~~~~~g~~~~LFd~Ia~~i~~fl~~~~~~~~~ 124 (445)
T 3hm8_A 54 DGSERGDFLALDLGGTNFRVLLVRV---------TTGVQITSEIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQGLSGQS 124 (445)
T ss_dssp CSCCCEEEEEEEESSSSEEEEEEEE---------SSSEEEEEEEECCCHHHHTSBHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred CCceeeEEEEEEecCCeEEEEEEEE---------CCceEEEEEEeccCccccCCCHHHHHHHHHHHHHHHHHHhCccccc
Confidence 3334568999999999999999999 66533222 111 11111135688999999999999987654322
Q ss_pred ccceEEEeecCCCCc-h--------h--------H----HHHHHHHHhh--CCCCceEEEeCcHHHHHHhh-cCCCCCeE
Q 020972 94 AVRAVCLAVSGVNHP-T--------D--------Q----QRILNWLRDI--FPGNVRLYVHNDALAALASG-TMGKLHGC 149 (319)
Q Consensus 94 ~i~~Igig~pG~~~~-~--------~--------~----~~l~~~L~~~--~~~~~pv~v~NDa~aa~~g~-~~g~~~~v 149 (319)
--.|+.+++|.-... . + + .-|++.++++ ++- ..+.|.||+.++++++ +.+.+..+
T Consensus 125 lplGftFSFP~~Q~sl~~g~Li~wtKGF~~~~~~G~dv~~lL~~al~r~~~~~v-~vvAivNDTvgTLla~~y~~~~~~i 203 (445)
T 3hm8_A 125 LPLGFTFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQAVEL-NVVAIVNDTVGTMMSCGYEDPRCEI 203 (445)
T ss_dssp CCEEEEECSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCSCC-CSEEEECHHHHHHHHHHTTCTTEEE
T ss_pred CcceEEEeeeeEeccCCceEEEEeeccccCCCCCCCcHHHHHHHHHHhcCCCCc-ceEEEecCcHHHHHhhccCCCCceE
Confidence 224555555543211 0 0 1 2455666554 221 2489999999988875 45666788
Q ss_pred EEEECccceeEeEe
Q 020972 150 VLIAGTGTIAYGFT 163 (319)
Q Consensus 150 ~v~~GTGigg~gii 163 (319)
.+++|||++++ ++
T Consensus 204 glIlGTGtNa~-y~ 216 (445)
T 3hm8_A 204 GLIVGTGTNAC-YM 216 (445)
T ss_dssp EEEESSSEEEE-EE
T ss_pred EEEEeCCceEE-EE
Confidence 99999999775 55
No 33
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.79 E-value=9.5e-07 Score=79.62 Aligned_cols=115 Identities=13% Similarity=0.133 Sum_probs=66.5
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEe
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig 101 (319)
.|+||||+|+|+|+++++|. +|+++.+.+.++.. ++. +.+.++++++.+ .+.+..+|.+ ++
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~---------~g~i~~~~~~~~~~----~~~---~~~~~~l~~l~~-~~~~~~~i~~--i~ 63 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKD---------GKEIVAKSLVAVGT----GTS---GPARSISEVLEN-AHMKKEDMAF--TL 63 (270)
T ss_dssp CEEEEEEECSSEEEEEEEET---------TTEEEEEEEEECCS----SCC---HHHHHHHHHHHH-HTCCGGGCSE--EE
T ss_pred cEEEEEEeccceEEEEEEeC---------CCCEEEEEEecCCC----CHH---HHHHHHHHHHHH-cCCChhHEEE--EE
Confidence 48999999999999999998 89999987654321 222 223344555543 2444456655 55
Q ss_pred ecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhh-cCCCCCeEEEEECccceeEeEecCCcE
Q 020972 102 VSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASG-TMGKLHGCVLIAGTGTIAYGFTEDGRD 168 (319)
Q Consensus 102 ~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~-~~g~~~~v~v~~GTGigg~gii~dG~~ 168 (319)
++|.... .+.. +. .|+ .|+..+.+.++ +...+.-+++-+|.+-.-.-.+.+|++
T Consensus 64 ~TG~g~~--------~~~~-~~--~~~--v~Ei~ah~~ga~~~~~~~~~vidiGGqd~k~i~~~~g~v 118 (270)
T 1hux_A 64 ATGYGRN--------SLEG-IA--DKQ--MSELSCHAMGASFIWPNVHTVIDIGGQDVKVIHVENGTM 118 (270)
T ss_dssp EESTTTT--------TTTT-TC--SEE--ECHHHHHHHHHHHHCTTCCEEEEEETTEEEEEEEETTEE
T ss_pred EeCcccc--------chhh-cC--CCC--cccHHHHHHHHHHhCCCCCEEEEECCCceEEEEEeCCce
Confidence 5776432 1122 33 454 67777666543 222223345666654433334456754
No 34
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=98.74 E-value=4.8e-06 Score=80.32 Aligned_cols=146 Identities=18% Similarity=0.115 Sum_probs=94.3
Q ss_pred CCcEEEEEEcCccceeEEEEeCccCCCCCCCCCC-----eEE--EEecC-CCCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 020972 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLP-----VLA--RAAAG-CSNHNSVGEDAARETIEKVMADALLKSGSN 91 (319)
Q Consensus 20 m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~-----il~--~~~~~-~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 91 (319)
..+.+|++|+|||+.|++++++ .|. ... +.+.+ |......+.+++.+-|++.+.+++++.+..
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L---------~g~~~~~~~~~~~~~~~~Ip~~l~~gt~~eLFd~IA~~i~~fl~~~~~~ 145 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKV---------GEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMK 145 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEE---------EC----CEEEEEEEEEEECCHHHHSSBHHHHHHHHHHHHHHHHHHTTCS
T ss_pred cceEEEEEEecCceEEEEEEEE---------CCCCCCcceEEEEEEeecCChHhccCCHHHHHHHHHHHHHHHHhhcccc
Confidence 3458999999999999999998 332 122 11111 111112356889999999999999987654
Q ss_pred ccccceEEEeecCCCCchh-----------------------HHHHHHHHHhh--CCCCceEEEeCcHHHHHHhhc-CCC
Q 020972 92 RSAVRAVCLAVSGVNHPTD-----------------------QQRILNWLRDI--FPGNVRLYVHNDALAALASGT-MGK 145 (319)
Q Consensus 92 ~~~i~~Igig~pG~~~~~~-----------------------~~~l~~~L~~~--~~~~~pv~v~NDa~aa~~g~~-~g~ 145 (319)
. +..-+|+.++=|.+... ..-|++.++++ ++- ..+.|.||..+.+++.. ...
T Consensus 146 ~-~~lpLGfTFSFP~~Q~sl~~g~Li~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v-~v~AlvNDTVgTL~s~aY~~~ 223 (470)
T 3f9m_A 146 H-KKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEM-DVVAMVNDTVATMISCYYEDH 223 (470)
T ss_dssp S-SCCEEEEEECSCEEEEETTEEEECCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCC-EEEEEECHHHHHHHHHHTTCT
T ss_pred c-cccceEEEEeccccccCCCceEEEeccccccCCCcCCccHHHHHHHHHHhcCCCCC-cEEEEEEcCHHHHHhcccCCC
Confidence 3 34456666665543210 13567777766 231 35889999998888654 445
Q ss_pred CCeEEEEECccceeEeEec-----------CCcEEeeCCCCCc
Q 020972 146 LHGCVLIAGTGTIAYGFTE-----------DGRDARAAGAGPI 177 (319)
Q Consensus 146 ~~~v~v~~GTGigg~gii~-----------dG~~~raGg~Ghl 177 (319)
+..+-+++|||..++ ++. .++..-.=|||..
T Consensus 224 ~~~iGlI~GTGtNa~-Y~E~~~~I~k~~~~~~~miINtEwG~F 265 (470)
T 3f9m_A 224 QCEVGMIVGTGCNAC-YMEEMQNVELVEGDEGRMCVNTEWGAF 265 (470)
T ss_dssp TEEEEEEESSSEEEE-EEEEGGGCTTSSCCSSEEEEECCGGGT
T ss_pred CceEEEEEecCCceE-EeeeccccccccCCCCcEEEeechhhc
Confidence 567889999999875 543 2344445577743
No 35
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=98.65 E-value=5.5e-08 Score=95.50 Aligned_cols=80 Identities=21% Similarity=0.228 Sum_probs=64.4
Q ss_pred cccCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCC------ccccCHHHHHHHHHHHHHHHHHHcC
Q 020972 16 EESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSG 89 (319)
Q Consensus 16 ~~~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~~~ 89 (319)
|..++++|+||||+|+|++|++++|. +|+++.+.+.+... ..+.+++++++.+.+++++++++.+
T Consensus 1 ~~~~~~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~ 71 (508)
T 3ifr_A 1 MSLAQGRQVIGLDIGTTSTIAILVRL---------PDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTTAG 71 (508)
T ss_dssp ------CEEEEEEECSSEEEEEEEET---------TTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcccCCEEEEEEecCcceEEEEECC---------CCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHhcC
Confidence 45566679999999999999999999 99999887664321 1246899999999999999998888
Q ss_pred CCccccceEEEeecC
Q 020972 90 SNRSAVRAVCLAVSG 104 (319)
Q Consensus 90 ~~~~~i~~Igig~pG 104 (319)
.++.+|.+|||+.+|
T Consensus 72 ~~~~~I~~Igis~~~ 86 (508)
T 3ifr_A 72 ESDWRPGGICVTGML 86 (508)
T ss_dssp GGGCCEEEEEEEECS
T ss_pred CChhheEEEEEECCC
Confidence 777899999999999
No 36
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=98.58 E-value=1.9e-07 Score=91.47 Aligned_cols=78 Identities=14% Similarity=0.161 Sum_probs=65.7
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCC
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSN 91 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 91 (319)
+.|++|+||||+|+|++|++++|. +|+++.+.+.+.. ...+.+++++++.+.+.+++++++.+.+
T Consensus 2 ~aM~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~ 72 (501)
T 3g25_A 2 NAMEKYILSIDQGTTSSRAILFNQ---------KGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVR 72 (501)
T ss_dssp -CCCCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cccccEEEEEEeCccceEEEEEcC---------CCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCC
Confidence 467789999999999999999999 9999988765432 1234689999999999999999988887
Q ss_pred ccccceEEEeecC
Q 020972 92 RSAVRAVCLAVSG 104 (319)
Q Consensus 92 ~~~i~~Igig~pG 104 (319)
+.+|.+|||+.++
T Consensus 73 ~~~I~~Igis~~~ 85 (501)
T 3g25_A 73 ADQIAGIGITNQR 85 (501)
T ss_dssp GGGEEEEEEEECS
T ss_pred cccEEEEEEECCc
Confidence 7899999999874
No 37
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=98.58 E-value=2.1e-07 Score=91.66 Aligned_cols=76 Identities=20% Similarity=0.200 Sum_probs=65.2
Q ss_pred CCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 020972 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (319)
Q Consensus 20 m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~ 93 (319)
|++|+||||+|+|++|++++|. +|+++.+.+.+.. ...+.+++++++.+.+.+++++++.+.++.
T Consensus 24 M~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~~~~~~~ 94 (520)
T 4e1j_A 24 MGGYILAIDQGTTSTRAIVFDG---------NQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEKSGITAN 94 (520)
T ss_dssp CSCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTTTCCGG
T ss_pred hhCeEEEEEeCCcceEEEEECC---------CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4579999999999999999999 9999988665432 123468999999999999999998888778
Q ss_pred ccceEEEeecC
Q 020972 94 AVRAVCLAVSG 104 (319)
Q Consensus 94 ~i~~Igig~pG 104 (319)
+|.+|||+.+|
T Consensus 95 ~I~~Igis~~g 105 (520)
T 4e1j_A 95 DIAAIGITNQR 105 (520)
T ss_dssp GEEEEEEEECS
T ss_pred cEEEEEEeCCc
Confidence 99999999998
No 38
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=98.52 E-value=3.4e-07 Score=89.52 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=64.8
Q ss_pred CCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 020972 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRS 93 (319)
Q Consensus 20 m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~~~~~~~ 93 (319)
|+.|+||||+|+|++|++++|. +|+++.+.+.+... ..+.+++++++.+.+.+++++++.+.++.
T Consensus 1 M~~~~lgiDiGtt~~k~~l~d~---------~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~ 71 (497)
T 2zf5_O 1 MEKFVLSLDEGTTSARAIIFDR---------ESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSARIEPN 71 (497)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred CCcEEEEEecCCchhEEEEECC---------CCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4569999999999999999999 99999887765321 12358999999999999999988877777
Q ss_pred ccceEEEeecC
Q 020972 94 AVRAVCLAVSG 104 (319)
Q Consensus 94 ~i~~Igig~pG 104 (319)
+|.+|||+.+|
T Consensus 72 ~i~~Igis~~~ 82 (497)
T 2zf5_O 72 QIAAIGVTNQR 82 (497)
T ss_dssp GEEEEEEEECS
T ss_pred cEEEEEEecCC
Confidence 89999999998
No 39
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.46 E-value=5.2e-05 Score=67.97 Aligned_cols=113 Identities=15% Similarity=0.203 Sum_probs=70.8
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
|+||||+|+|+++++++|. +++++........ ..++. ..+++++++++++....++..++.
T Consensus 2 ~~lGID~GsT~tk~av~d~---------~~~il~~~~~~~g----~~~e~----a~~vl~~~~~~a~~~~~~~~~~a~-- 62 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKN---------GEDIVASETISSG----TGTTG----PSRVLEKLYGKTGLAREDIKKVVV-- 62 (276)
T ss_dssp EEEEEEECSSCEEEEEEET---------TTEEEEEEEESCC----TTSSH----HHHHHHHHHHHHCCCGGGEEEEEE--
T ss_pred eEEEEEcCccEEEEEEEEC---------CCeEEEEEEecCC----CCHHH----HHHHHHHHHHHCCCcchhcccccc--
Confidence 8999999999999999998 8888887654321 12232 234567778888877666665543
Q ss_pred cCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc--CCCCCeEEEEECccceeEeEecCCcE
Q 020972 103 SGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MGKLHGCVLIAGTGTIAYGFTEDGRD 168 (319)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~--~g~~~~v~v~~GTGigg~gii~dG~~ 168 (319)
.|... .... .|....|...+.+++.. ......++...|.+.-..-+..+|..
T Consensus 63 t~~~~------------~a~~--~~~~~Vne~~aha~a~~~~~~~~~~vl~lgG~~~~~~~~~~~g~~ 116 (276)
T 4ehu_A 63 TGYGR------------MNYS--DADKQISELSCHARGVNFIIPETRTIIDIGGQDAKVLKLDNNGRL 116 (276)
T ss_dssp ESTTG------------GGCC--SCSEECCHHHHHHHHHHHHSTTCCEEEEECSSCEEEEEECTTSCE
T ss_pred CchHH------------HHhh--CCCcccchHHHHHHHHHHhCCCCCeEEEEcCCCceEEEEEecCce
Confidence 33221 1233 57788899988777642 33345555555554433323345654
No 40
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=98.44 E-value=4.8e-07 Score=88.60 Aligned_cols=76 Identities=12% Similarity=0.115 Sum_probs=62.5
Q ss_pred CCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCC------ccccCHHHHHHHHHHHHHHHHHHc--CCC
Q 020972 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKS--GSN 91 (319)
Q Consensus 20 m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~~--~~~ 91 (319)
||.|+||||+|+|++|++++|. +|+++.+.+.+... ..+.+++++++.+.+.+++++++. +.+
T Consensus 2 ~m~~~lgIDiGtT~~k~~l~d~---------~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~ 72 (503)
T 2w40_A 2 SMNVILSIDQSTQSTKVFFYDE---------ELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLKDKYT 72 (503)
T ss_dssp -CEEEEEEEECSSEEEEEEEET---------TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CccEEEEEEeCCcceEEEEECC---------CCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 3468999999999999999999 99999887765421 123589999999999999998876 555
Q ss_pred ccccceEEEeecC
Q 020972 92 RSAVRAVCLAVSG 104 (319)
Q Consensus 92 ~~~i~~Igig~pG 104 (319)
..+|.+|||+.+|
T Consensus 73 ~~~i~~Igis~~~ 85 (503)
T 2w40_A 73 SVIIKCIGITNQR 85 (503)
T ss_dssp SCEEEEEEEEECS
T ss_pred ccceEEEEEcCCc
Confidence 5689999999996
No 41
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.43 E-value=8.1e-07 Score=87.21 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=64.5
Q ss_pred CcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCccc
Q 020972 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (319)
Q Consensus 21 ~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~ 94 (319)
++|+||||+|+|++|++++|. +|+++.+.+.+.. ...+.+++++++.+.+.+++++++.+.++.+
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~ 72 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH---------DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQ 72 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred CcEEEEEEcCCcceEEEEECC---------CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 359999999999999999999 9999988765432 1234689999999999999999998888889
Q ss_pred cceEEEeecC
Q 020972 95 VRAVCLAVSG 104 (319)
Q Consensus 95 i~~Igig~pG 104 (319)
|.+|||+.++
T Consensus 73 I~~Igis~~~ 82 (510)
T 2p3r_A 73 IAAIGITNQR 82 (510)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEEeCCc
Confidence 9999999987
No 42
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=98.41 E-value=0.00022 Score=66.92 Aligned_cols=250 Identities=18% Similarity=0.128 Sum_probs=137.1
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCC-ccccCHHHHHHHHHHHHHHHHHHcCCCc--cc
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN-HNSVGEDAARETIEKVMADALLKSGSNR--SA 94 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~~~~~~--~~ 94 (319)
..|+ .+|.|..|.|++|+.|+|.. +.+++.+....... ....+..+.++.|.+ ++.+.+... ++
T Consensus 20 ~~m~-~ILviN~GSSS~K~~l~~~~--------~~~~l~~g~~e~ig~~~~~dh~~a~~~il~----~L~~~~~~~~~~~ 86 (398)
T 4ijn_A 20 GSMV-TVLVVNSGSSSLKYAVVRPA--------SGEFLADGIIEEIGSGAVPDHDAALRAAFD----ELAAAGLHLEDLD 86 (398)
T ss_dssp --CC-EEEEEEECSSCEEEEEECTT--------TCCEEEEEEECSTTBTTBCSHHHHHHHHHH----HHHHTTCCGGGSC
T ss_pred cccc-cEEEEeCCchhheEEEEECC--------CCceeeeeeeeecCCCCccCHHHHHHHHHH----HHHHcCCCccccc
Confidence 4454 59999999999999999971 44466665443211 001233444444333 344555433 57
Q ss_pred cceEEE-eecCCC--------Cchh---------------HHHH--HHHHHhhCCCCce-EEEeCcHH-------HHHHh
Q 020972 95 VRAVCL-AVSGVN--------HPTD---------------QQRI--LNWLRDIFPGNVR-LYVHNDAL-------AALAS 140 (319)
Q Consensus 95 i~~Igi-g~pG~~--------~~~~---------------~~~l--~~~L~~~~~~~~p-v~v~NDa~-------aa~~g 140 (319)
|.+||- -++|-. +++- ..+| ....++.+|+ +| |.+-.-+. +..++
T Consensus 87 i~aVGhRvVhGG~~f~~~~~I~~~vl~~l~~~~~lAPLHnp~nL~gI~a~~~~~P~-~p~vavfDTafh~tmp~~A~~y~ 165 (398)
T 4ijn_A 87 LKAVGHRMVHGGKTFYKPSVVDDELIAKARELSPLAPLHNPPAIKGIEVARKLLPD-LPHIAVFDTAFFHDLPAPASTYA 165 (398)
T ss_dssp EEEEEEEESCCTTTCCSCEECCHHHHHHHHHTGGGSTTTHHHHHHHHHHHHHHCTT-SCEEEEETTGGGTTCCHHHHCCS
T ss_pred eeEEecCCCCCCcCCCCCeEeCHHHHHHHHhcCcCCcccCHHHHHHHHHHHHHCCC-CCeEEecCChhhccCcHHHHHcC
Confidence 888864 245532 2210 0112 2334566764 77 43332221 11111
Q ss_pred -----------------------------hcCC----CCCeEEEEECccceeEeEecCCcEEe-eCC----CCCccCCcC
Q 020972 141 -----------------------------GTMG----KLHGCVLIAGTGTIAYGFTEDGRDAR-AAG----AGPILGDWG 182 (319)
Q Consensus 141 -----------------------------~~~g----~~~~v~v~~GTGigg~gii~dG~~~r-aGg----~Ghl~gd~G 182 (319)
+..| .-+.|++.+|+|+..+ .+.||+.+. .-| -|-+.|..
T Consensus 166 lP~~~~~~~giRryGFHGlS~~yva~r~a~~lgk~~~~~~lIv~HLGnGaSv~-Ai~~GksvDtsmG~tpleGl~mgtR- 243 (398)
T 4ijn_A 166 IDRELAETWHIKRYGFHGTSHEYVSQQAAIFLDRPLESLNQIVLHLGNGASAS-AVAGGKAVDTSMGLTPMEGLVMGTR- 243 (398)
T ss_dssp SCHHHHHHTTCCCCCSCHHHHHHHHHHHHHHTTSCGGGCEEEEEEESSSEEEE-EEETTEEEEESCCSSTTSSSCCSSC-
T ss_pred CCHHHHHhcCceEeCccHHhHHHHHHHHHHHhCCChHHccEEEEEECCCcEEE-EEECCEEEEeCCCCCcccCCCCCCC-
Confidence 0112 2378999999999665 568999875 111 12222211
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHh--chhHHHHHHHHcCCHHHHHHHH
Q 020972 183 SGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIA--ALVPVVVSCAEAGDEVANKILQ 260 (319)
Q Consensus 183 sa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a--~~~~~v~~~A~~GD~~A~~il~ 260 (319)
.|..++ ...-.+.+..+ -+.+++...++.+.....+. ...+.|++++++||+.|+.+++
T Consensus 244 -----------------sG~iDp-~~l~~l~~~~~-~s~~e~~~~Lnk~sGLlg~sG~~D~R~i~~~a~~Gd~~A~la~d 304 (398)
T 4ijn_A 244 -----------------SGDIDP-GVIMYLWRTAG-MSVDDIESMLNRRSGVLGLGGASDFRKLRELIESGDEHAKLAYD 304 (398)
T ss_dssp -----------------CCSCCH-HHHHHHHHTSC-CCHHHHHHHHHHSCHHHHHHCCSSHHHHHHHHHTTCHHHHHHHH
T ss_pred -----------------CCCCCh-HHHHHHHHhcC-CCHHHHHHHHHhccCcceecCCCCHHHHHHHHHCCCHHHHHHHH
Confidence 011111 11111111111 13344444443221100000 2367899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh-cccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhhc
Q 020972 261 DSVEELALSVKAVVQRL-SLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIEG 317 (319)
Q Consensus 261 ~a~~~Lg~~la~li~~l-~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~~ 317 (319)
.++..+++.|.++...| ++ ..|||.||+..++ +.+...++|+
T Consensus 305 ~f~yriak~Iga~aa~LG~v--------------DaIVfTGGIgEns-~~vr~~I~~~ 347 (398)
T 4ijn_A 305 VYIHRLRKYIGAYMAVLGRT--------------DVISFTAGVGENV-PPVRRDALAG 347 (398)
T ss_dssp HHHHHHHHHHHHHHHHHSSC--------------CEEEEEHHHHHHC-HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCCC--------------cEEEECCcccccc-HHHHHHHHHH
Confidence 99999999999999988 44 5899999999444 4566666654
No 43
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=98.41 E-value=3.1e-06 Score=75.41 Aligned_cols=127 Identities=18% Similarity=0.141 Sum_probs=81.7
Q ss_pred CCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEE
Q 020972 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (319)
Q Consensus 20 m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Ig 99 (319)
|..++|.||+|+|+++++++|. ++++.+.+.++. .. .+.++....+.+.++. ...++.++.
T Consensus 1 ~~~M~L~IDIGNT~ik~gl~~~----------~~l~~~~r~~T~-~~-~t~de~~~~l~~l~~~-------~~~~i~~i~ 61 (249)
T 3bex_A 1 MDPMYLLVDVGNTHSVFSITED----------GKTFRRWRLSTG-VF-QTEDELFSHLHPLLGD-------AMREIKGIG 61 (249)
T ss_dssp CCCEEEEEEECSSEEEEEEESS----------SSSCEEEEEECC-TT-CCHHHHHHHHHHHHGG-------GGGGEEEEE
T ss_pred CCceEEEEEECCCeEEEEEEEC----------CEEEEEEEecCC-CC-CCHHHHHHHHHHHHhh-------ccccCCEEE
Confidence 4456899999999999999984 677777766442 22 4567766555554432 224688888
Q ss_pred EeecCCCCchhHHHHHHHHHhhCCC----------CceEEEeC------cHHHHHHhhc-CCCCCeEEEEECccceeEeE
Q 020972 100 LAVSGVNHPTDQQRILNWLRDIFPG----------NVRLYVHN------DALAALASGT-MGKLHGCVLIAGTGTIAYGF 162 (319)
Q Consensus 100 ig~pG~~~~~~~~~l~~~L~~~~~~----------~~pv~v~N------Da~aa~~g~~-~g~~~~v~v~~GTGigg~gi 162 (319)
++.+++ .....+.+.+++.|+. ++++..+| |-.++++|+. .-..+.++|-+||.+ .+-+
T Consensus 62 IsSVvp---~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~~~~~~~iVvD~GTA~-T~d~ 137 (249)
T 3bex_A 62 VASVVP---TQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVKEYGKNGIIIDMGTAT-TVDL 137 (249)
T ss_dssp EEESCH---HHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHHHTCSCEEEEEESSEE-EEEE
T ss_pred EEcCcH---HHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHHHcCCCEEEEEcCCce-EEEE
Confidence 888763 3333455555554431 14555666 6666666653 123589999999998 4455
Q ss_pred ecCCcEE
Q 020972 163 TEDGRDA 169 (319)
Q Consensus 163 i~dG~~~ 169 (319)
+.+|+..
T Consensus 138 v~~g~~l 144 (249)
T 3bex_A 138 VVNGSYE 144 (249)
T ss_dssp EETTEEE
T ss_pred EeCCeEe
Confidence 5777654
No 44
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=98.40 E-value=1.1e-06 Score=86.26 Aligned_cols=75 Identities=16% Similarity=0.265 Sum_probs=63.9
Q ss_pred CcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCccc
Q 020972 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (319)
Q Consensus 21 ~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~ 94 (319)
++|+||||+|+|++|++++|. +|+++.+.+.+.. ...+.+++++++.+.+.+++++++.+.++.+
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~~~~~~ 74 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR---------NGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEA 74 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred CCEEEEEEcCCCceEEEEECC---------CCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 469999999999999999999 9999988765422 1234689999999999999999988887789
Q ss_pred cceEEEeecC
Q 020972 95 VRAVCLAVSG 104 (319)
Q Consensus 95 i~~Igig~pG 104 (319)
|.+|||+.++
T Consensus 75 I~~Igis~~~ 84 (506)
T 3h3n_X 75 IAGIGITNQR 84 (506)
T ss_dssp EEEEEEEECS
T ss_pred eEEEEeeCCc
Confidence 9999999875
No 45
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=98.40 E-value=7.6e-07 Score=87.02 Aligned_cols=74 Identities=22% Similarity=0.168 Sum_probs=62.6
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i 95 (319)
.|+||||+|+|++|++++|. +|+++.+.+.+... ..+.+++++++.+.+.+++++++.+.+..+|
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~---------~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i 72 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTL---------EGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRRAGAEAGEV 72 (495)
T ss_dssp -CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred cEEEEEeeCCcceEEEEECC---------CCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHhcCCCcccE
Confidence 48999999999999999999 99999887664321 1236899999999999999999887777789
Q ss_pred ceEEEeecC
Q 020972 96 RAVCLAVSG 104 (319)
Q Consensus 96 ~~Igig~pG 104 (319)
.+|||+.+|
T Consensus 73 ~~Igis~~~ 81 (495)
T 2dpn_A 73 LALGITNQR 81 (495)
T ss_dssp CEEEEEECS
T ss_pred EEEEEeCCC
Confidence 999999996
No 46
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=98.35 E-value=1.4e-06 Score=85.44 Aligned_cols=75 Identities=13% Similarity=0.039 Sum_probs=63.1
Q ss_pred CCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCcc
Q 020972 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRS 93 (319)
Q Consensus 20 m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~ 93 (319)
||+|+||||+|+|++|++++|. +|+++.+.+.+.. ...+.+++++++.+.+++++++ +.+.++.
T Consensus 3 mm~~~lgIDiGtts~k~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~~~~~~~ 72 (511)
T 3hz6_A 3 LAFYIATFDIGTTEVKAALADR---------DGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-QSGVDAR 72 (511)
T ss_dssp CCCEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-TTTCCGG
T ss_pred cccEEEEEEeCCCceEEEEECC---------CCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-hcCCChh
Confidence 5679999999999999999999 9999988765421 1234689999999999999998 7777778
Q ss_pred ccceEEEeecC
Q 020972 94 AVRAVCLAVSG 104 (319)
Q Consensus 94 ~i~~Igig~pG 104 (319)
+|.+|||+..+
T Consensus 73 ~I~~Igis~q~ 83 (511)
T 3hz6_A 73 RVSAIVLSGQM 83 (511)
T ss_dssp GEEEEEEEECC
T ss_pred HeEEEEEeccc
Confidence 89999998765
No 47
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=98.33 E-value=1.9e-06 Score=84.33 Aligned_cols=74 Identities=16% Similarity=0.214 Sum_probs=63.3
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCC------ccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN------HNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~------~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i 95 (319)
.|+||||+|+|++|++++|. +|+++.+.+.+... ..+.+++++++.+.+.+++++++.+..+.+|
T Consensus 2 ~~~lgiDiGtts~k~~l~d~---------~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~~~~~~i 72 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDH---------SGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTRGNLTHEDI 72 (504)
T ss_dssp CEEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred CEEEEEecCCcceEEEEECC---------CCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHHcCCCcccE
Confidence 48999999999999999999 99999887665321 1235899999999999999999887777789
Q ss_pred ceEEEeecC
Q 020972 96 RAVCLAVSG 104 (319)
Q Consensus 96 ~~Igig~pG 104 (319)
.+|||+.+|
T Consensus 73 ~~Igis~~g 81 (504)
T 2d4w_A 73 AAVGITNQR 81 (504)
T ss_dssp EEEEEEECS
T ss_pred EEEEEeCCC
Confidence 999999998
No 48
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=98.29 E-value=2.1e-06 Score=85.05 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=61.5
Q ss_pred CcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCccc
Q 020972 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (319)
Q Consensus 21 ~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~ 94 (319)
++|+||||+|+|++|++++|. +|+++.+.+.+.. ...+.+++++++.+.+.+++++++.+..+.+
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~---------~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~~~~~~~ 74 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDL---------QGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQADINPIQ 74 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred CcEEEEEEECcccEEEEEECC---------CCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHcCCCHhH
Confidence 459999999999999999999 9999988765421 2234689999999999999999988887788
Q ss_pred cceEEEee
Q 020972 95 VRAVCLAV 102 (319)
Q Consensus 95 i~~Igig~ 102 (319)
|.+||++.
T Consensus 75 I~~Igis~ 82 (554)
T 3l0q_A 75 VKGLGFDA 82 (554)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcC
Confidence 99998853
No 49
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=98.25 E-value=3e-05 Score=69.63 Aligned_cols=125 Identities=14% Similarity=0.091 Sum_probs=82.0
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
++|+||+|+|+|+++++|. ++++.+.+.++. . .+.+++ ...+.++++..+.+..+|.+++++.
T Consensus 3 MlL~IDIGNT~iK~gl~d~----------~~l~~~~r~~T~-~--~t~de~----~~~l~~ll~~~~~~~~~I~~iiISS 65 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG----------DEIKLRFRHTSK-V--STSDEL----GIFLKSVLRENNCSPETIRKIAICS 65 (266)
T ss_dssp CEEEEEECSSEEEEEEEET----------TEEEEEEEEECS-C--CCHHHH----HHHHHHHHHTTTCCGGGCCEEEEEE
T ss_pred eEEEEEECCCeEEEEEEEC----------CEEEEEEEecCC-C--CCHHHH----HHHHHHHHHHcCCChhhceEEEEec
Confidence 6999999999999999985 688888776543 2 466664 3445556677777777899999999
Q ss_pred cCCCCchhHHHHHHHHHhhCCC-----------CceEEEeC------cHHHHHHhhc--CCCCCeEEEEECccceeEeEe
Q 020972 103 SGVNHPTDQQRILNWLRDIFPG-----------NVRLYVHN------DALAALASGT--MGKLHGCVLIAGTGTIAYGFT 163 (319)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~~~~-----------~~pv~v~N------Da~aa~~g~~--~g~~~~v~v~~GTGigg~gii 163 (319)
+++. -...+...+++.|+. +.++..+| |--++++++. .+..+.++|-+||=+ .+=++
T Consensus 66 Vvp~---~~~~l~~~~~~~~~~~~~~v~~~~~~g~~~~y~~P~~lG~DR~~~~vaA~~~~~~~~~iVVD~GTA~-T~d~v 141 (266)
T 3djc_A 66 VVPQ---VDYSLRSACVKYFSIDPFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATHSFPNQNIIVIDFGTAT-TFCAI 141 (266)
T ss_dssp SCHH---HHHHHHHHHHHHTCCCCEECCSSSCCCCEECCSSGGGSCHHHHHHHHHHHHHSTTSEEEEEEESSEE-EEEEE
T ss_pred chHh---HHHHHHHHHHHHcCCCeEEEcCCCCCCcccCCCChhhhHHHHHHHHHHHHHhcCCCCEEEEECCCee-EEEEE
Confidence 8853 344566667766641 02222333 4344455443 233589999999987 44343
Q ss_pred -cCCcE
Q 020972 164 -EDGRD 168 (319)
Q Consensus 164 -~dG~~ 168 (319)
.+|+.
T Consensus 142 ~~~g~~ 147 (266)
T 3djc_A 142 SHKKAY 147 (266)
T ss_dssp CTTSEE
T ss_pred cCCCcE
Confidence 34543
No 50
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.25 E-value=3.2e-06 Score=83.21 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=63.1
Q ss_pred CcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCC------CCccccCHHHHHHHHHHHHHHHHHHcCCCccc
Q 020972 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGC------SNHNSVGEDAARETIEKVMADALLKSGSNRSA 94 (319)
Q Consensus 21 ~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~ 94 (319)
.+|+||||+|.|++|++|+|. +|+++.+.+.+. ....+++++++++.+.+.++++++++++++.+
T Consensus 3 kkYvlgID~GTss~Ka~l~d~---------~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~~~~~~~~ 73 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDH---------DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQ 73 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECT---------TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred ceEEEEEEccccceeeeEEcC---------CCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 479999999999999999999 999998765431 12234689999999999999999999998899
Q ss_pred cceEEEeecC
Q 020972 95 VRAVCLAVSG 104 (319)
Q Consensus 95 i~~Igig~pG 104 (319)
|.+|||..-+
T Consensus 74 I~aIgis~q~ 83 (526)
T 3ezw_A 74 IAAIGITNQR 83 (526)
T ss_dssp EEEEEEEECS
T ss_pred EEEEEEeCCC
Confidence 9998886544
No 51
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=98.16 E-value=3e-06 Score=82.54 Aligned_cols=72 Identities=13% Similarity=0.054 Sum_probs=53.9
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC-----CccccCHHHHHHHHHHHHHHHHHHcCCCc
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-----NHNSVGEDAARETIEKVMADALLKSGSNR 92 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~-----~~~~~~~~~~~~~i~~~i~~~l~~~~~~~ 92 (319)
+.||+|+||||+|+|++|++++|. +|+++.+.+.+.. ...+.+++++++.+.+.+++++ +
T Consensus 2 ~~mm~~~lgIDiGTts~Ka~l~d~---------~G~i~~~~~~~~~~~~~~g~~eqdp~~~~~~~~~~i~~~~-~----- 66 (482)
T 3h6e_A 2 SLSTGATIVIDLGKTLSKVSLWDL---------DGRMLDRQVRPSIPLEIDGIRRLDAPDTGRWLLDVLSRYA-D----- 66 (482)
T ss_dssp ------CEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCEESSSCEECCHHHHHHHHHHHHHHTT-T-----
T ss_pred chhhceEEEEEcCCCCeEEEEEEC---------CCcEEEEEEecCCcccCCCceeECHHHHHHHHHHHHHHHH-h-----
Confidence 456789999999999999999998 9999988776432 1224689999999988888875 2
Q ss_pred cccceEEEeecC
Q 020972 93 SAVRAVCLAVSG 104 (319)
Q Consensus 93 ~~i~~Igig~pG 104 (319)
.+|.+|||+..+
T Consensus 67 ~~I~aIgis~~~ 78 (482)
T 3h6e_A 67 HPVTTIVPVGHG 78 (482)
T ss_dssp SCCCEEEEEECS
T ss_pred cCCCEEEEecCc
Confidence 478999998876
No 52
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=98.13 E-value=6.5e-06 Score=80.11 Aligned_cols=71 Identities=15% Similarity=0.127 Sum_probs=58.8
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (319)
|+||||+|+|++|++++|. +|+++.+.+.+.. ...+.+++++++.+.+.+++++++.. ..+|.
T Consensus 1 ~~lgiDiGtt~~k~~l~d~---------~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~~--~~~i~ 69 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNE---------QGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHS--LQDVK 69 (484)
T ss_dssp CEEEEEECSSEEEEEEECT---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHSC--CTTCC
T ss_pred CEEEEEecCcccEEEEECC---------CCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhCC--ccceE
Confidence 4799999999999999999 9999988765432 11236889999999999999987753 45799
Q ss_pred eEEEeecC
Q 020972 97 AVCLAVSG 104 (319)
Q Consensus 97 ~Igig~pG 104 (319)
+|||+.+|
T Consensus 70 ~Igis~~~ 77 (484)
T 2itm_A 70 ALGIAGQM 77 (484)
T ss_dssp EEEEEECS
T ss_pred EEEEcCCc
Confidence 99999999
No 53
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=98.13 E-value=8.6e-06 Score=79.75 Aligned_cols=71 Identities=17% Similarity=0.245 Sum_probs=59.2
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC------CccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS------NHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i 95 (319)
+|+||||+|+|++|++++|. +|+++.+.+.+.. ...+.+++++++.+.+.+++++++.+ .+|
T Consensus 4 ~~~lgIDiGtts~K~~l~d~---------~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~~---~~I 71 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDI---------NGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQKID---GKI 71 (504)
T ss_dssp EEEEEEEECSSEEEEEEEET---------TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHTCS---SEE
T ss_pred CEEEEEEecCCceEEEEEcC---------CCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHhCC---CCe
Confidence 59999999999999999999 9999988766422 12346899999999999999988764 579
Q ss_pred ceEEEeecC
Q 020972 96 RAVCLAVSG 104 (319)
Q Consensus 96 ~~Igig~pG 104 (319)
.+|||+.-+
T Consensus 72 ~~Igis~q~ 80 (504)
T 3ll3_A 72 AAISWSSQM 80 (504)
T ss_dssp EEEEEEECS
T ss_pred EEEEEECCC
Confidence 999988765
No 54
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.09 E-value=0.0012 Score=58.63 Aligned_cols=134 Identities=18% Similarity=0.072 Sum_probs=85.8
Q ss_pred CcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCcc---ccCHHHHHHHHHHHHHHHHHHcCCCccccce
Q 020972 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN---SVGEDAARETIEKVMADALLKSGSNRSAVRA 97 (319)
Q Consensus 21 ~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (319)
..+++|||+|.+++|++++|. +++++.....+..... -.+.+...+.+...++.+....+.. +..
T Consensus 27 ~~~~~gIDiGS~s~k~vi~~~---------~~~~l~~~~~~~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~---~~~ 94 (272)
T 3h1q_A 27 PPYKVGVDLGTADIVLVVTDQ---------EGIPVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGSE---LFQ 94 (272)
T ss_dssp SCCEEEEECCSSEEEEEEECT---------TCCEEEEEEEECCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSC---CCE
T ss_pred CCEEEEEEcccceEEEEEECC---------CCcEEEEEeecccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCc---cCe
Confidence 358999999999999999988 7888877654322111 1234666666666666665554432 334
Q ss_pred EEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCeEEEEECccceeEeEecCCcEEe
Q 020972 98 VCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDAR 170 (319)
Q Consensus 98 Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g~~~~v~v~~GTGigg~gii~dG~~~r 170 (319)
+.+.+|..........+.... +.++. ....+.++..+++++. +..+.+++=+|-|+--..++.+|++..
T Consensus 95 ~v~tvp~~~~~~~~~~~~~~~-~~~g~-~~~~i~~e~~A~a~~~--~~~~~~viDiGggst~~~~~~~g~~~~ 163 (272)
T 3h1q_A 95 AATAIPPGTVGRNAEACGHVV-AGAGL-ELVTLVDEPVAAARAL--GINDGIVVDIGGGTTGIAVIEKGKITA 163 (272)
T ss_dssp EEEECCSCC---CTTHHHHHH-HHTTC-EEEEEECHHHHHHHHH--TCSSEEEEEECSSCEEEEEEETTEEEE
T ss_pred EEEEcCCCCCHHHHHHHHHHH-HHcCC-eeeecccHHHHHHHHH--cCCCEEEEEECCCcEEEEEEECCEEEE
Confidence 557777754333333344444 44552 3578889998887753 345688999999986665667777654
No 55
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=98.05 E-value=9.4e-06 Score=80.69 Aligned_cols=76 Identities=14% Similarity=0.134 Sum_probs=59.4
Q ss_pred CcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC-----------------CccccCHHHHHHHHHHHHHH
Q 020972 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-----------------NHNSVGEDAARETIEKVMAD 83 (319)
Q Consensus 21 ~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~-----------------~~~~~~~~~~~~~i~~~i~~ 83 (319)
+.|+||||+|+|++|++|+|.. +|+++.+.+.+.. ...+++++++++.+.+++++
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~--------~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~ 75 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLS--------NGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPA 75 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETT--------TCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHH
T ss_pred CCEEEEEecCCcceEEEEEECC--------CCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHH
Confidence 3599999999999999999952 7999988765422 12346889999999999999
Q ss_pred HHHHcCCCccccceEEEeecC
Q 020972 84 ALLKSGSNRSAVRAVCLAVSG 104 (319)
Q Consensus 84 ~l~~~~~~~~~i~~Igig~pG 104 (319)
++++++..+.+|.+|||+.-+
T Consensus 76 ~l~~~~~~~~~I~~Igis~q~ 96 (572)
T 3jvp_A 76 VMKESGVDADDVIGIGVDFTA 96 (572)
T ss_dssp HHHC---CCSCEEEEEEEECS
T ss_pred HHHHcCCChhHEEEEEEecCC
Confidence 999888777889999998754
No 56
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=97.90 E-value=0.0072 Score=56.54 Aligned_cols=247 Identities=16% Similarity=0.119 Sum_probs=137.9
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCC---ccccCHHHHHHHHHHHHHHHHHHcCCC--ccccce
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN---HNSVGEDAARETIEKVMADALLKSGSN--RSAVRA 97 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~~~~~--~~~i~~ 97 (319)
.+|.|..|.+++|+.|+|.. +.+++.+....... ....+-++.++.|.+. +.+.+.. .++|.+
T Consensus 13 ~iLviN~GSSSlK~~l~~~~--------~~~~l~~G~~e~ig~~~~~~~~h~~a~~~il~~----L~~~~~~~~~~~i~a 80 (391)
T 3r9p_A 13 RVLVINSGSSSLKFQLVDPE--------FGVAASTGIVERIGEESSPVPDHDAALRRAFDM----LAGDGVDLNTAGLVA 80 (391)
T ss_dssp EEEEEEECSSCEEEEEEETT--------TTEEEEEEEECCTTCTTCSCCSHHHHHHHHHHH----HHHTTCCTTTTTEEE
T ss_pred eEEEEecCchhheeEEEecC--------CCceEEEEEEeecCCCccCccCHHHHHHHHHHH----HHhcCCCCcccceeE
Confidence 48999999999999999962 45666665543211 1112344555544443 3444432 357888
Q ss_pred EEE-eecCCC--------Cchh---------------HHHH--HHHHHhhCCCCce-EEEeCcHH-------HHHHh---
Q 020972 98 VCL-AVSGVN--------HPTD---------------QQRI--LNWLRDIFPGNVR-LYVHNDAL-------AALAS--- 140 (319)
Q Consensus 98 Igi-g~pG~~--------~~~~---------------~~~l--~~~L~~~~~~~~p-v~v~NDa~-------aa~~g--- 140 (319)
||. -+.|-. +++- ..+| ....++.+|+ +| |.+-.-+. +..++
T Consensus 81 VGhRvVhGG~~f~~~~~I~~~vl~~l~~~~~lAPLHnp~nL~gI~a~~~~~P~-~p~VavFDTaFh~tmp~~A~~y~lP~ 159 (391)
T 3r9p_A 81 VGHRVVHGGNTFYRPTVLDDAVIARLHELSELAPLHNPPALQGIEVARRLLPD-IAHVAVFDTGFFHDLPPAAATYAIDR 159 (391)
T ss_dssp EEEEESCCTTTCCSCEECCHHHHHHHHTTGGGSTTTHHHHHHHHHHHHHHCTT-SEEEEEETTGGGTTCCHHHHCCSSCH
T ss_pred EecCCCCCCCCCCCCEECcHHHHHHHHhcCcCCcccCHHHHHHHHHHHHHCCC-CCEEEEECChhhccccHHHHHcCCCH
Confidence 864 245532 2110 0111 2335667875 78 44443221 11111
Q ss_pred --------------------------hcCCC----CCeEEEEECccceeEeEecCCcEEe-eC----CCCCccCCcCChH
Q 020972 141 --------------------------GTMGK----LHGCVLIAGTGTIAYGFTEDGRDAR-AA----GAGPILGDWGSGY 185 (319)
Q Consensus 141 --------------------------~~~g~----~~~v~v~~GTGigg~gii~dG~~~r-aG----g~Ghl~gd~Gsa~ 185 (319)
+..|. -+.|++-+|.|+..+ -+.||+.+- .- .-|-+.|..
T Consensus 160 e~~~~~giRryGFHGlS~~yva~r~a~~lgk~~~~~~lIv~HLGnGaSv~-Ai~~GksvDtsmG~tpleGl~mgtR---- 234 (391)
T 3r9p_A 160 ELADRWQIRRYGFHGTSHRYVSEQAAAFLDRPLRGLKQIVLHLGNGCSAS-AIAGTRPLDTSMGLTPLEGLVMGTR---- 234 (391)
T ss_dssp HHHHHTTCSCCCSCHHHHHHHHHHHHHHTTSCGGGCEEEEEEESSSEEEE-EEETTEEEEESCCSSTTSSSCCSSC----
T ss_pred HHHHhcCceEeceeHHhHHHHHHHHHHHhCCChHHcCEEEEEeCCCcEeE-EEECCEEEeeCCCCCcccCCCCCCC----
Confidence 01132 378999999998665 558999874 11 122222211
Q ss_pred HHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHHHHhccCCChHHHh--chhHHHHHHHHcCCHHHHHHHHHHH
Q 020972 186 GIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELIGWTYVDPSWARIA--ALVPVVVSCAEAGDEVANKILQDSV 263 (319)
Q Consensus 186 ~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a--~~~~~v~~~A~~GD~~A~~il~~a~ 263 (319)
.|..++..+. .+.+..+. +.+++...++++.....+. ...+.|.+++++||+.|+.+++-++
T Consensus 235 --------------sGdiDp~~l~-~l~~~~g~-s~~ei~~~Lnk~SGLlglsG~~D~R~v~~~~~~gd~~A~lA~d~f~ 298 (391)
T 3r9p_A 235 --------------SGDIDPSIVS-YLCHTAGM-GVDDVESMLNHRSGVVGLSGVRDFRRLRELIESGDGAAQLAYSVFT 298 (391)
T ss_dssp --------------CCSCCTHHHH-HHHHHSCC-CHHHHHHHHHHSCHHHHHHSCSCSHHHHHHHHTTCHHHHHHHHHHH
T ss_pred --------------CCCCChHHHH-HHHHhcCC-CHHHHHHHHHhccCceeecCCCCHHHHHHHHHCCCHHHHHHHHHHH
Confidence 1111121111 12222221 3444444443221100010 2357888999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhhc
Q 020972 264 EELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIEG 317 (319)
Q Consensus 264 ~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~~ 317 (319)
..+++.|.++...|+- ...||+.||+.. +...+...++|+
T Consensus 299 yri~k~Iga~aa~Lg~-------------vDaIVfTGGIge-ns~~vR~~i~~~ 338 (391)
T 3r9p_A 299 HRLRKYIGAYLAVLGH-------------TDVISFTAGIGE-NDAAVRRDAVSG 338 (391)
T ss_dssp HHHHHHHHHHHHHHSS-------------CCEEEEEHHHHH-HCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCC-------------CCEEEECccccc-CCHHHHHHHHHH
Confidence 9999999999988841 247999999994 434566666653
No 57
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=97.90 E-value=3.6e-05 Score=75.55 Aligned_cols=70 Identities=17% Similarity=0.153 Sum_probs=55.4
Q ss_pred CcEEEEEEcCccceeEEEEe-CccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEE
Q 020972 21 REVILGLDGGTTSTVCICMP-VISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVC 99 (319)
Q Consensus 21 ~~~~lGIDiGGTk~~~~l~d-~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Ig 99 (319)
++|+||||+|+|++|++++| . +|+++.+.+.+.....+.+++++++.+.+++++ .+. ..+|.+||
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~---------~G~i~~~~~~~~~g~~e~d~~~~~~~i~~~l~~----~~~-~~~I~~Ig 69 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAE---------TGELVRFGQAKHPNGTSVDPSYWWSAFQEAAEQ----AGG-LDDVSALA 69 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETT---------TCCEEEEEEEECCSSSEECTHHHHHHHHHHHHH----TTC-STTEEEEE
T ss_pred CcEEEEEEeccccEEEEEEECC---------CCeEEEEEEEeCCCCceECHHHHHHHHHHHHHh----cCC-ccCceEEE
Confidence 45999999999999999999 8 999999887654333456888888877666654 444 46899999
Q ss_pred EeecC
Q 020972 100 LAVSG 104 (319)
Q Consensus 100 ig~pG 104 (319)
|+..+
T Consensus 70 is~q~ 74 (515)
T 3i8b_A 70 VGGQQ 74 (515)
T ss_dssp EEECS
T ss_pred EeCCc
Confidence 99887
No 58
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=97.71 E-value=3.6e-05 Score=74.92 Aligned_cols=73 Identities=8% Similarity=-0.017 Sum_probs=53.6
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecC----------CCCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG----------CSNHNSVGEDAARETIEKVMADALLKSGSN 91 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~----------~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 91 (319)
+++||||+|+|++|++++|. +|+++.+.+.+ .....+.+++++++.+.++++++...
T Consensus 4 ~~~lgiDiGtts~k~~l~d~---------~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~---- 70 (489)
T 2uyt_A 4 RNCVAVDLGASSGRVMLARY---------ERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA---- 70 (489)
T ss_dssp EEEEEEEECSSEEEEEEEEE---------EGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT----
T ss_pred ceEEEEEecCCCceEEEEEe---------cCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC----
Confidence 47999999999999999998 88876654321 11112357889999998888887652
Q ss_pred ccccceEEEee----cCCCC
Q 020972 92 RSAVRAVCLAV----SGVNH 107 (319)
Q Consensus 92 ~~~i~~Igig~----pG~~~ 107 (319)
..+|.+|||+. ++++|
T Consensus 71 ~~~i~~Igis~q~~~~v~~D 90 (489)
T 2uyt_A 71 GIAIDSIGIDTWGVDFVLLD 90 (489)
T ss_dssp TCCCCEEEEEECSSCEEEEC
T ss_pred CCCceEEEEecCcccEEEEC
Confidence 24799999998 66544
No 59
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=97.63 E-value=0.0017 Score=58.11 Aligned_cols=124 Identities=20% Similarity=0.188 Sum_probs=79.5
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
++|.||+|.|+++++++|. ++++...+..+... .+.++... .+.++++..+.++.++.++.++.
T Consensus 1 MlL~IDIGNT~ik~gl~~~----------~~l~~~~r~~T~~~--~t~de~~~----~l~~ll~~~~~~~~~i~~iiISS 64 (268)
T 2h3g_X 1 MIFVLDVGNTNAVLGVFEE----------GELRQHWRMETDRH--KTEDEYGM----LVKQLLEHEGLSFEDVKGIIVSS 64 (268)
T ss_dssp CEEEEEECSSEEEEEEEET----------TEEEEEEEEECCTT--CCHHHHHH----HHHHHHHHTTCCGGGCCEEEEEE
T ss_pred CEEEEEECcCcEEEEEEEC----------CEEEEEEEecCCCc--CCHHHHHH----HHHHHHHHcCCCcccCcEEEEEc
Confidence 3789999999999999984 67777776644322 35565444 44556666677667888888877
Q ss_pred cCCCCchhHHHHHHHHHhhCCCCceEEE------------eC------cHHHHHHhhc--CCCCCeEEEEECccceeEeE
Q 020972 103 SGVNHPTDQQRILNWLRDIFPGNVRLYV------------HN------DALAALASGT--MGKLHGCVLIAGTGTIAYGF 162 (319)
Q Consensus 103 pG~~~~~~~~~l~~~L~~~~~~~~pv~v------------~N------Da~aa~~g~~--~g~~~~v~v~~GTGigg~gi 162 (319)
+. |.-...+.+.+++.|+. .|+++ +| |--++++|+. .+ .+.++|-+||=+ .+=+
T Consensus 65 Vv---p~~~~~l~~~~~~~~~~-~~~~v~~~~~~gl~~~y~~P~~lG~DR~~~~vaA~~~~~-~~~iVVD~GTAt-T~d~ 138 (268)
T 2h3g_X 65 VV---PPIMFALERMCEKYFKI-KPLVVGPGIKTGLNIKYENPREVGADRIVNAVAGIHLYG-SPLIIVDFGTAT-TYCY 138 (268)
T ss_dssp SC---HHHHHHHHHHHHHHTCC-CCEECSTTCCCCCEECSSCGGGSCHHHHHHHHHHHHHHC-SSEEEEEESSEE-EEEE
T ss_pred cC---hhHHHHHHHHHHHHhCC-CeEEEcCCCCCCccccCCChhhcCHHHHHHHHHHHHhcC-CCEEEEECCCce-EEEE
Confidence 63 44456677778887752 23332 22 2223344432 34 589999999987 4444
Q ss_pred e-cCCcE
Q 020972 163 T-EDGRD 168 (319)
Q Consensus 163 i-~dG~~ 168 (319)
+ .+|+.
T Consensus 139 v~~~g~~ 145 (268)
T 2h3g_X 139 INEEKHY 145 (268)
T ss_dssp ECTTSEE
T ss_pred ECCCCcE
Confidence 4 45544
No 60
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=97.59 E-value=9.2e-05 Score=72.99 Aligned_cols=75 Identities=16% Similarity=0.112 Sum_probs=51.4
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC----------Cc-------cccCHHH-HHHHHHH
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS----------NH-------NSVGEDA-ARETIEK 79 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~----------~~-------~~~~~~~-~~~~i~~ 79 (319)
.+| .|+||||+|.|++|++++|. +|+++.+.+.+.. .. .++++++ +.+.+..
T Consensus 7 ~~~-~~~lgID~GTts~Ka~l~d~---------~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~ 76 (538)
T 4bc3_A 7 APR-RCCLGWDFSTQQVKVVAVDA---------ELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDI 76 (538)
T ss_dssp --C-CEEEEEEECSSEEEEEEEET---------TCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHH
T ss_pred CCC-CEEEEEEEcCcCEEEEEECC---------CCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHH
Confidence 554 59999999999999999999 9999988765311 01 0123444 4444444
Q ss_pred HHHHHHHHcCCCccccceEEEeec
Q 020972 80 VMADALLKSGSNRSAVRAVCLAVS 103 (319)
Q Consensus 80 ~i~~~l~~~~~~~~~i~~Igig~p 103 (319)
+ .+.+.+.++++.+|.+||+..-
T Consensus 77 ~-~~~l~~~~~~~~~I~aIgis~q 99 (538)
T 4bc3_A 77 I-LEKMKASGFDFSQVLALSGAGQ 99 (538)
T ss_dssp H-HHHHHHTTCCGGGEEEEEEEEC
T ss_pred H-HHHHHHcCCChHHeEEEEeccc
Confidence 4 4456677777788999888754
No 61
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.17 E-value=0.14 Score=46.87 Aligned_cols=120 Identities=14% Similarity=0.167 Sum_probs=74.1
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCC-ccccCHH----HHHHHHHHHHHHHHHHcCCCccccce
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSN-HNSVGED----AARETIEKVMADALLKSGSNRSAVRA 97 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~-~~~~~~~----~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (319)
++||||.+.+.+.+++++. ++++......-.. .....|+ .-.+.+..++++++++++++.++|..
T Consensus 2 ~iLgIdts~~~~~val~~~----------g~i~~~~~~~~~~~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~ 71 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE----------DKVLANVFDTLTTEKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDV 71 (330)
T ss_dssp CEEEEECSSSEEEEEEECS----------SCEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCE
T ss_pred EEEEEEccCCCeEEEEEEC----------CEEEEEEEEEeecccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcE
Confidence 5999999999999999974 6777654321100 0001233 23556778899999999998889999
Q ss_pred EEEe-ecCCCCc-hhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcC-C-CCCeEEEEEC
Q 020972 98 VCLA-VSGVNHP-TDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM-G-KLHGCVLIAG 154 (319)
Q Consensus 98 Igig-~pG~~~~-~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~-g-~~~~v~v~~G 154 (319)
|.++ =||.... .-...+.+.|...++ .|+.-.|--.+-++++.. + ....+++..|
T Consensus 72 Ia~~~GPG~~~~lrvg~~~ak~la~~~~--~pl~~v~h~~aHa~~a~~~~~~~~~~l~v~G 130 (330)
T 2ivn_A 72 IAFSQGPGLGPALRVVATAARALAVKYR--KPIVGVNHCIAHVEITKMFGVKDPVGLYVSG 130 (330)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHHTT--CCEEEEEHHHHHHHGGGGGTCCSCEEEEECS
T ss_pred EEEECCCCchHHHHHHHHHHHHHHHHcC--CCEEeeCcHHHHHHHHhhcCCCCCeEEEEcC
Confidence 8764 3443210 113345566666676 788877766654544432 2 1234455555
No 62
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=96.30 E-value=0.91 Score=44.25 Aligned_cols=102 Identities=17% Similarity=0.172 Sum_probs=66.1
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCc----c-ccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNH----N-SVGEDAARETIEKVMADALLKSGSNRSAVR 96 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~----~-~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (319)
.++||||-....+.++|++. +++++.......... . +.....-.+.+..++++++++ +...++.
T Consensus 6 m~iL~i~ts~~~~~~al~~~---------~~~~~~~~~~~~~~~~gg~~p~~a~~~h~~~l~~~i~~~l~~--~~~~~id 74 (540)
T 3en9_A 6 MICLGLEGTAEKTGVGIVTS---------DGEVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEV--VDKNEID 74 (540)
T ss_dssp CEEEEEECSSSEEEEEEEET---------TSCEEEEEEEECCCCCSSSSCCCHHHHHHHHHHHHHHHHHHH--SCGGGCC
T ss_pred ceEEEEEcCccceEEEEEEC---------CCeEEEEEEEeecCCCCCCChHHHHHHHHHHHHHHHHHHHHh--CCHhHCc
Confidence 37999999888999999997 668887654321100 0 011134456788888888887 6777899
Q ss_pred eEEEee-cCCCCc-hhHHHHHHHHHhhCCCCceEEEeCcHHH
Q 020972 97 AVCLAV-SGVNHP-TDQQRILNWLRDIFPGNVRLYVHNDALA 136 (319)
Q Consensus 97 ~Igig~-pG~~~~-~~~~~l~~~L~~~~~~~~pv~v~NDa~a 136 (319)
+|+++. ||.... .-+......|...++ +|++-.|--.+
T Consensus 75 ~ia~~~gPG~~~~l~vg~~~ak~la~~~~--~p~~~v~h~~a 114 (540)
T 3en9_A 75 LIAFSQGPGLGPSLRVTATVARTLSLTLK--KPIIGVNHCIA 114 (540)
T ss_dssp EEEEEEESSCHHHHHHHHHHHHHHHHHHT--CCEEEEEHHHH
T ss_pred EEEEecCCCchhhHHHHHHHHHHHHHHhC--CCeeEeccHHH
Confidence 988764 554211 113445566666666 88877776554
No 63
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=95.92 E-value=0.99 Score=41.29 Aligned_cols=134 Identities=16% Similarity=0.191 Sum_probs=77.9
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC-CccccCHH----HHHHHHHHHHHHHHHHcCCCccccce
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS-NHNSVGED----AARETIEKVMADALLKSGSNRSAVRA 97 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~-~~~~~~~~----~~~~~i~~~i~~~l~~~~~~~~~i~~ 97 (319)
++||||--...+.++|++. ++++........ ...-.-|+ .-.+.+..+|+++++++++..++|.+
T Consensus 7 ~iLgIdts~~~~svAl~~~----------~~i~~~~~~~~~~~~gGv~p~~a~~~H~~~l~~~i~~~L~~ag~~~~did~ 76 (334)
T 3eno_A 7 IVLGLEGTAHTISCGIIDE----------SRILAMESSMYRPKTGGIRPLDAAVHHSEVIDTVISRALEKAKISIHDIDL 76 (334)
T ss_dssp EEEEEECSSSEEEEEEEES----------SCCCEEEEEECCCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred eEEEEECCCcCeEEEEEEC----------CEEEEEEEEeeccccCCcCcchHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 7999998888899999985 567765432110 01001122 23457888999999999999999999
Q ss_pred EEEeecCCCCch---hHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc--CC-CCCeEEEEECccceeEeEecCCcEEe
Q 020972 98 VCLAVSGVNHPT---DQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MG-KLHGCVLIAGTGTIAYGFTEDGRDAR 170 (319)
Q Consensus 98 Igig~pG~~~~~---~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~--~g-~~~~v~v~~GTGigg~gii~dG~~~r 170 (319)
|+++. ||.... -+..+.+.|...++ .|++-.|--.+-+++.. .+ ....+++..|.+.--. .+.+++...
T Consensus 77 Iav~~-gPG~~t~lrvg~~~ak~La~~~~--~Pl~~v~hl~aHa~sa~~~s~~~~pl~L~vsGg~t~l~-~~~~~~~~~ 151 (334)
T 3eno_A 77 IGFSM-GPGLAPSLRVTATAARTISVLTG--KPIIGVNHPLGHIEIGRRVTGAIDPVMLYVSGGNTQVI-AHVNGRYRV 151 (334)
T ss_dssp EEEEC-SSSCHHHHHHHHHHHHHHHHHHT--CCCEEECHHHHHHHHHHHHHTCSSCEEEEESSSCEEEE-EECSSBEEE
T ss_pred EEEEc-CCCCcchHHHHHHHHHHHhhccC--CCeEEeccHHHHHHHHHhcCCCCCCEEEEEECCCcEEE-EEeCCEEEE
Confidence 98874 333322 13344555666666 78776665443222221 11 2235556666664222 234454433
No 64
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=95.83 E-value=0.12 Score=48.71 Aligned_cols=142 Identities=13% Similarity=0.036 Sum_probs=77.9
Q ss_pred CCeEEEEECccceeEeEecCCcEEeeCCCCCccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCChhhHH
Q 020972 146 LHGCVLIAGTGTIAYGFTEDGRDARAAGAGPILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSSPDELI 225 (319)
Q Consensus 146 ~~~v~v~~GTGigg~gii~dG~~~raGg~Ghl~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~~~~l~ 225 (319)
-+.|++-+|.|+.-+ -+.||+.+-. -.|+. ..+|- -.| ...|..++..+ -.+.+..+. +.+++.
T Consensus 219 ~~lIv~HLGnGaSi~-Ai~~GksvDT-sMG~T-pleGl--~mg---------tRsGdiDp~~l-~~l~~~~g~-s~~ei~ 282 (415)
T 3sk3_A 219 LNIITCHLGNGGSVS-AIRNGKCVDT-SMGLT-PLEGL--VMG---------TRSGDIDPAII-FHLHDTLGM-SVDQIN 282 (415)
T ss_dssp CCEEEEECSSSCEEE-EEETTEEEEE-CCCCC-CSCC------------------CCCCHHHH-HHHHHHHTC-CHHHHH
T ss_pred CcEEEEEeCCCceEE-EEECCEEEEe-CCCcC-CCCCc--cCC---------CCCCCCChHHH-HHHHHhcCC-CHHHHH
Confidence 378999999999665 4589997641 11111 11121 000 11222222222 222333332 445555
Q ss_pred HHhccCCC---hHHHhchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcch
Q 020972 226 GWTYVDPS---WARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENIL 302 (319)
Q Consensus 226 ~~~~~~~~---~~~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~ 302 (319)
..++.+.. -..+....+.|.+ +.+||+.|+..++-++..+++.|..+...|+- . -.-||+-||+
T Consensus 283 ~~Lnk~SGLlglsG~S~D~R~le~-~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~G--~----------vDaIVFTgGI 349 (415)
T 3sk3_A 283 KMLTKESGLLGLTEVTSDCRYVED-NYATKEDAKRAMDVYCHRLAKYIGSYTALMDG--R----------LDAVVFTGGI 349 (415)
T ss_dssp HHC------CCSTTTTCGGGCSSC-CCCCHHHHHHHHHHHHHHHHHHHHHGGGGSTT--C----------CCEEEEEHHH
T ss_pred HHHhcCcCcccccCCcchHHHHHH-HHcCCHhHHHHHHHHHHHHHHHHHHHHHHhCC--C----------CCEEEECCcc
Confidence 44443210 0111112344433 34699999999999999999999999887752 1 1379999999
Q ss_pred hhhcHHHHHHHHhhc
Q 020972 303 FLLSWLVVFLKLIEG 317 (319)
Q Consensus 303 ~~~~~~~~~~~~~~~ 317 (319)
- .+...+...++++
T Consensus 350 G-Ens~~vR~~v~~~ 363 (415)
T 3sk3_A 350 G-ENAAMVRELSLGK 363 (415)
T ss_dssp H-TTCHHHHHHHHHT
T ss_pred c-cCCHHHHHHHHhh
Confidence 9 4555666666654
No 65
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=95.66 E-value=0.25 Score=44.04 Aligned_cols=121 Identities=23% Similarity=0.249 Sum_probs=69.4
Q ss_pred CCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceE
Q 020972 19 GGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAV 98 (319)
Q Consensus 19 ~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~I 98 (319)
+|..+.|.||+|-|++++++++. +++++...+..+ .++....+. . .+..++.++
T Consensus 20 ~~~~M~L~IDiGNT~ik~g~~~~---------~~~~~~~~r~~t-------~de~~~~l~--------~--~~~~~i~~v 73 (271)
T 2f9w_A 20 HMASMILELDCGNSLIKWRVIEG---------AARSVAGGLAES-------DDALVEQLT--------S--QQALPVRAC 73 (271)
T ss_dssp ---CEEEEEEECSSCEEEEEEET---------TTEEEEEEEESS-------HHHHHHHHH--------H--TTTSCEEEE
T ss_pred cccCcEEEEEeCCCeeEEEEEeC---------CCEEEEEEEecC-------HHHHHHHHh--------c--CcccCCCEE
Confidence 35568999999999999999995 467777766532 122222111 1 233467776
Q ss_pred EEeecCCCCchhHHHHHHHHHhhCCCCceEEE---------eC----------cHHHHHHhhcC-CCCCeEEEEECccce
Q 020972 99 CLAVSGVNHPTDQQRILNWLRDIFPGNVRLYV---------HN----------DALAALASGTM-GKLHGCVLIAGTGTI 158 (319)
Q Consensus 99 gig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v---------~N----------Da~aa~~g~~~-g~~~~v~v~~GTGig 158 (319)
.++.-. .+.-...+++.+++.|+. .|.++ .| |--++++|+.. -..+.++|-+||=+
T Consensus 74 iisSV~--vp~~~~~l~~~~~~~~~~-~p~~v~~~~~~~gl~~~Y~~P~~lGaDR~~~avaA~~~y~~~~iVVD~GTAt- 149 (271)
T 2f9w_A 74 RLVSVR--SEQETSQLVARLEQLFPV-SALVASSGKQLAGVRNGYLDYQRLGLDRWLALVAAHHLAKKACLVIDLGTAV- 149 (271)
T ss_dssp EEEECS--CHHHHHHHHHHHHHHSSC-CCEECCCCSEETTEECCSSSGGGSCHHHHHHHHHHHHHHSSCEEEEEESSEE-
T ss_pred EEEECC--chHHHHHHHHHHHHHcCC-CeEEEeCCCccCCceecCCChhhccHHHHHHHHHHHHhcCCCEEEEEcCCce-
Confidence 665432 344556778888887752 33433 12 22223444321 13589999999987
Q ss_pred eEeEe-cCCcEE
Q 020972 159 AYGFT-EDGRDA 169 (319)
Q Consensus 159 g~gii-~dG~~~ 169 (319)
.+=++ .+|+..
T Consensus 150 T~D~V~~~G~~l 161 (271)
T 2f9w_A 150 TSDLVAADGVHL 161 (271)
T ss_dssp EEEEECTTSBEE
T ss_pred EEEEECCCCeEE
Confidence 54444 356543
No 66
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=95.54 E-value=0.052 Score=43.43 Aligned_cols=91 Identities=15% Similarity=0.225 Sum_probs=56.9
Q ss_pred CCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEE-ecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceE
Q 020972 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARA-AAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAV 98 (319)
Q Consensus 20 m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~-~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~I 98 (319)
|+..+||+|.|..+|=+++.|. .+.+..-. ..+..+ .+..++.|.+.+++. ++..|
T Consensus 1 ~~~~iLglD~G~kriGvAvsd~---------~~~~A~pl~ti~~~~-----~~~~~~~l~~li~e~---------~v~~i 57 (138)
T 1nu0_A 1 MSGTLMAFDFGTKSIGVAVGQR---------ITGTARPLPAIKAQD-----GTPDWNIIERLLKEW---------QPDEI 57 (138)
T ss_dssp CCCEEEEEECCSSEEEEEEEET---------TTTEEEEEEEEEEET-----TEECHHHHHHHHHHH---------CCSEE
T ss_pred CCCeEEEEEeCCCEEEEEEEcC---------CCCEEeeEEEEEcCC-----cchHHHHHHHHHHHc---------CCCEE
Confidence 5667999999999999999997 55443221 221111 112234455554432 56788
Q ss_pred EEeec----CCCCchh--HHHHHHHHHhhCCCCceEEEeCcHH
Q 020972 99 CLAVS----GVNHPTD--QQRILNWLRDIFPGNVRLYVHNDAL 135 (319)
Q Consensus 99 gig~p----G~~~~~~--~~~l~~~L~~~~~~~~pv~v~NDa~ 135 (319)
-||+| |-..+.. -..+.+.|+++|+ +||..-+.-.
T Consensus 58 VvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~--lpV~~~DERl 98 (138)
T 1nu0_A 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFG--VEVKLHDERL 98 (138)
T ss_dssp EEEEEECTTSCBCHHHHHHHHHHHHHHHHHC--CCEEEEEEEC
T ss_pred EEecccCCCcCcCHHHHHHHHHHHHHHHHhC--CCEEEEcCCc
Confidence 89998 4333222 2578888888887 8888766543
No 67
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=95.29 E-value=1.5 Score=39.20 Aligned_cols=106 Identities=17% Similarity=0.093 Sum_probs=60.2
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEe
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig 101 (319)
.+.+|||+|+|.+|+++++ +++++.... +. ...+++++. ++. .++.. +.
T Consensus 20 ~~~iGIDiGsTt~K~V~~~----------~~~i~~~~~-~~-----~~~~~~l~~--------l~~-----~~~~~--i~ 68 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQEQ----------DNQRTFKTE-LT-----KNIDQVVEW--------LNQ-----QQIEK--LC 68 (287)
T ss_dssp -CEEEEEECSSEEEEEEEC----------SSCEEEEEE-EG-----GGHHHHHHH--------HHT-----SCCSE--EE
T ss_pred CeEEEEEEChhhEEEEEEc----------CCEEEEEEe-ch-----HHHHHHHHH--------hcc-----cCceE--EE
Confidence 4799999999999999985 577776532 21 122222221 121 23433 34
Q ss_pred ecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc--CCC-----CCeEEEEECccceeEeEecC-CcEEe
Q 020972 102 VSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--MGK-----LHGCVLIAGTGTIAYGFTED-GRDAR 170 (319)
Q Consensus 102 ~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~--~g~-----~~~v~v~~GTGigg~gii~d-G~~~r 170 (319)
+.|.... .+.+.++ .|....+...|-..|.. ... .+.+++-+|+|.. . +..+ +...|
T Consensus 69 ~TG~G~~--------~~~~~l~--~~~~~v~Ei~~~~~Ga~~l~~~~~~~~~~~~vIdIGg~ds-i-i~v~~~~f~r 133 (287)
T 2ews_A 69 LTGGNAG--------VIAENIN--IPAQIFVEFDAASQGLGILLKEQGHDLADYIFANVGTGTS-L-HYFDGQSQRR 133 (287)
T ss_dssp EESTTHH--------HHHTTSS--SCCEECCHHHHHHHHHHHHHHHTTCCCSCEEEEEESSSEE-E-EEECSSCEEE
T ss_pred EEChhHH--------hHhHhhC--CCcceeehhHHHHHHHHHhcccCCCCcCCeEEEEeCCCeE-E-EEEcCCceEE
Confidence 4665421 1233455 67777777766555432 111 3578999999985 4 4344 44555
No 68
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=94.90 E-value=0.058 Score=53.73 Aligned_cols=83 Identities=20% Similarity=0.252 Sum_probs=56.7
Q ss_pred CcccccccccccCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCcc-c----------------cC
Q 020972 7 GEIWDFETAEESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHN-S----------------VG 69 (319)
Q Consensus 7 ~~~~~~~~~~~~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~-~----------------~~ 69 (319)
.++++.++.-+.. ..|-++||+|.|.+.+.|+|+. +|+++.+.... |++ . .+
T Consensus 192 ~~ii~ve~g~~~~-~~~GlAvDiGTTtv~~~LvdL~--------tG~~l~~~~~~--NpQ~~~G~DVisRI~~a~~~~~g 260 (631)
T 3zyy_X 192 NKALYIKSGSASQ-RVFGLAIDIGTTTVVVQLVDLV--------SGKVLGTKGNY--NKQAAFGDDVISRIIYVDENPDG 260 (631)
T ss_dssp EEEEEEEESSCCC-CCEEEEEEECSSEEEEEEEETT--------TCCEEEEEEEE--CGGGGTCSSHHHHHHHHHHCTTH
T ss_pred ceEEEEecCCCCC-CceEEEEEecccceeEEEEECC--------CCCEEEeeccc--CCCCCcchHHHHHHHHHhcCccc
Confidence 3455555443333 4589999999999999999984 89999987642 332 0 11
Q ss_pred HH----HHHHHHHHHHHHHHHHcCCCccccceEEE
Q 020972 70 ED----AARETIEKVMADALLKSGSNRSAVRAVCL 100 (319)
Q Consensus 70 ~~----~~~~~i~~~i~~~l~~~~~~~~~i~~Igi 100 (319)
.+ .+++.|.++++++++++++++++|..+.+
T Consensus 261 ~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v 295 (631)
T 3zyy_X 261 AEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVV 295 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEE
Confidence 11 24455666777777778999888887655
No 69
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=94.55 E-value=0.079 Score=42.99 Aligned_cols=94 Identities=17% Similarity=0.171 Sum_probs=57.9
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEE-EEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEe
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLA-RAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~-~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig 101 (319)
.+||||.|-.+|-+++.|. .|.+.. ...+.+.+ ...+..++.|. +++++ .++..|.||
T Consensus 4 riLGiDpG~~riGvAv~d~---------~g~~a~p~~~I~~~~---~r~~~~~~~l~----~li~~-----~~~~~ivVG 62 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE---------MGWTAQGIETIKINE---AEGDYGLSRLS----ELIKD-----YTIDKIVLG 62 (150)
T ss_dssp EEEEEEECSSEEEEEEECT---------TSSSEEEEEEEECBG---GGTBCCHHHHH----HHHTT-----SEEEEEEEE
T ss_pred EEEEEEccCCEEEEEEEEC---------CCCEEeeEEEEEcCC---cchHHHHHHHH----HHHHH-----cCCCEEEEe
Confidence 5999999999999999998 777654 23332211 00122233333 44443 267788899
Q ss_pred ecCCC-Cch----h--HHHHHHHHHhhCCCCceEEEeCcHHHHHHh
Q 020972 102 VSGVN-HPT----D--QQRILNWLRDIFPGNVRLYVHNDALAALAS 140 (319)
Q Consensus 102 ~pG~~-~~~----~--~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g 140 (319)
.| .. +.+ . -..+...|.+.++ +||.+-+...+...+
T Consensus 63 lP-~~~nGt~~~~~~~ar~f~~~L~~~~~--lpV~~vDEr~Ts~~A 105 (150)
T 1vhx_A 63 FP-KNMNGTVGPRGEASQTFAKVLETTYN--VPVVLWDERLTTMAA 105 (150)
T ss_dssp CC-CCBTTBCCHHHHHHHHHHHHHHHHHC--SCEEEECCSSCHHHH
T ss_pred ee-ecCCcchhHHHHHHHHHHHHHHHhhC--CCEEEecCCCCHHHH
Confidence 98 32 111 1 1356667777776 899998777655443
No 70
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=94.52 E-value=0.76 Score=34.26 Aligned_cols=81 Identities=10% Similarity=0.065 Sum_probs=52.8
Q ss_pred EEEEEcCccceeEEEEeCccCCCCCCCCCCe---EEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEE
Q 020972 24 ILGLDGGTTSTVCICMPVISMSDSLPDPLPV---LARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (319)
Q Consensus 24 ~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~i---l~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igi 100 (319)
+||+|.|..+|=+++.|. .+.+ +..... .+.+..++.|.+.+++. ++..+-|
T Consensus 3 iLglD~G~kriGvAvsd~---------~~~~A~pl~ti~~-------~~~~~~~~~l~~li~e~---------~v~~iVv 57 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE---------GVPLASGRGYLVR-------KTLEEDVEALLDFVRRE---------GLGKLVV 57 (98)
T ss_dssp EEEEEESSSEEEEEEECS---------CCSSCCCEEEEEC-------CCHHHHHHHHHHHHHHH---------TCCEEEE
T ss_pred EEEEEeCCCEEEEEEEeC---------CCCeeeeeEEEEc-------cCcHHHHHHHHHHHHHc---------CCCEEEE
Confidence 899999999999999997 5543 222211 13445556666655542 5678889
Q ss_pred eec----CCCCch--hHHHHHHHHHhhCCCCceEEEeC
Q 020972 101 AVS----GVNHPT--DQQRILNWLRDIFPGNVRLYVHN 132 (319)
Q Consensus 101 g~p----G~~~~~--~~~~l~~~L~~~~~~~~pv~v~N 132 (319)
|+| |-..+. .-..+.+.|+++ + .||.+-+
T Consensus 58 GlP~~mdGt~~~~~~~~~~f~~~L~~~-~--lpV~~~D 92 (98)
T 1iv0_A 58 GLPLRTDLKESAQAGKVLPLVEALRAR-G--VEVELWD 92 (98)
T ss_dssp ECCCCCCSSSCCCSSTTHHHHHHHHHT-T--CEEEEEC
T ss_pred eeccCCCCCcCHHHHHHHHHHHHHhcC-C--CCEEEEC
Confidence 988 332221 235788888887 6 8987654
No 71
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=94.47 E-value=0.71 Score=43.40 Aligned_cols=137 Identities=11% Similarity=0.061 Sum_probs=83.9
Q ss_pred CCeEEEEECccceeEeEecCCcEEe-eCCCCC----ccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCC
Q 020972 146 LHGCVLIAGTGTIAYGFTEDGRDAR-AAGAGP----ILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSS 220 (319)
Q Consensus 146 ~~~v~v~~GTGigg~gii~dG~~~r-aGg~Gh----l~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~ 220 (319)
.+.|++-+|.|+.-+ -+.||+.+- .-|+-- +.|. ..|..++..+. .+.+..+ -+
T Consensus 202 ~~lIv~HLGnGaSi~-Ai~~GksVDTsMG~TpleGl~MgT------------------RsGdiDp~~l~-~l~~~~~-~s 260 (408)
T 1g99_A 202 TKIITCHLGNGSSIT-AVEGGKSVETSMGFTPLEGLAMGT------------------RCGSIDPAIVP-FLMEKEG-LT 260 (408)
T ss_dssp CEEEEEEESSSEEEE-EEETTEEEEESCCSSTTSSSCCSS------------------CCCSCCTTHHH-HHHHHHT-CC
T ss_pred CCEEEEEeCCccchh-heECCEEEEeCCCCCCCCCCCCCC------------------CCCCCCHHHHH-HHHHhcC-CC
Confidence 378999999998655 558999764 222211 1111 11222222222 2222223 24
Q ss_pred hhhHHHHhccCCCh---HHHhchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEE
Q 020972 221 PDELIGWTYVDPSW---ARIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLL 297 (319)
Q Consensus 221 ~~~l~~~~~~~~~~---~~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~iv 297 (319)
.+++...++.+... ..+....+.|.+++.+||+.|+..++-++..+++.|..+...++- -.-||
T Consensus 261 ~~ei~~~Lnk~SGLlglsG~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~Lgg-------------vDaiV 327 (408)
T 1g99_A 261 TREIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLNG-------------ADAVV 327 (408)
T ss_dssp HHHHHHHHHHSCHHHHHHSSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTS-------------CSEEE
T ss_pred HHHHHHHHhhcCCceEecCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhhCC-------------CCEEE
Confidence 44554444432211 011223677888888999999999999999999999999988852 24799
Q ss_pred EEcchhhhcHHHHHHHHhhc
Q 020972 298 MENILFLLSWLVVFLKLIEG 317 (319)
Q Consensus 298 l~Gg~~~~~~~~~~~~~~~~ 317 (319)
+-||+-. ....+...++++
T Consensus 328 FTgGIGE-ns~~vR~~i~~~ 346 (408)
T 1g99_A 328 FTAGIGE-NSASIRKRILTG 346 (408)
T ss_dssp EEHHHHH-HCHHHHHHHHTT
T ss_pred ECccccc-cCHHHHHHHHhh
Confidence 9999994 444666666654
No 72
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=94.47 E-value=0.13 Score=48.77 Aligned_cols=75 Identities=12% Similarity=0.115 Sum_probs=53.4
Q ss_pred CcEEEEEEcCccceeEEEEeCccCCCCCCCCC-CeEEEEecCCCCcc---ccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 020972 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPL-PVLARAAAGCSNHN---SVGEDAARETIEKVMADALLKSGSNRSAVR 96 (319)
Q Consensus 21 ~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G-~il~~~~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (319)
..+++|+|||.|++++++..... ++ +++.....++.... =.+.+.+.+.|.++++++-+.++. ++.
T Consensus 7 ~~~ivglDIGts~I~~vv~~~~~-------~~~~i~g~~~~~s~gv~~G~I~di~~~~~~I~~av~~ae~~~g~---~i~ 76 (419)
T 4a2a_A 7 TVFYTSIDIGSRYIKGLVLGKRD-------QEWEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLKELEEQLQK---SLR 76 (419)
T ss_dssp CCEEEEEEECSSEEEEEEEEC-----------CEEEEEEEEECCSEETTEESBHHHHHHHHHHHHHHHHHHHTS---CCC
T ss_pred CCEEEEEEccCCEEEEEEEEEcC-------CCCEEEEEEEeccCCeeCCEEEcHHHHHHHHHHHHHHHHHHcCC---CcC
Confidence 45899999999999999987511 23 67776665432110 136788888888888888777765 566
Q ss_pred e-EEEeecCC
Q 020972 97 A-VCLAVSGV 105 (319)
Q Consensus 97 ~-Igig~pG~ 105 (319)
. +.+++||.
T Consensus 77 ~~v~v~i~g~ 86 (419)
T 4a2a_A 77 SDFVISFSSV 86 (419)
T ss_dssp SEEEEEECCT
T ss_pred ceEEEEEcCC
Confidence 7 88899997
No 73
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=94.34 E-value=0.82 Score=42.90 Aligned_cols=137 Identities=14% Similarity=0.061 Sum_probs=83.6
Q ss_pred CCeEEEEECccceeEeEecCCcEEe-eCCCCC----ccCCcCChHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHcCCCC
Q 020972 146 LHGCVLIAGTGTIAYGFTEDGRDAR-AAGAGP----ILGDWGSGYGIAAQALTAVIRAYDGRGPDTMLTSNILSTLELSS 220 (319)
Q Consensus 146 ~~~v~v~~GTGigg~gii~dG~~~r-aGg~Gh----l~gd~Gsa~~iG~~~~~~~~~~~dg~~~~~~l~~~~~~~~~~~~ 220 (319)
.+.|++-+|.|+.-+ -+.||+.+- .-|+-- +.|. ..|..++..+. .+.+..+ -+
T Consensus 201 ~~lIv~HLGnGaSi~-Ai~~GksVDTsMG~TpLeGl~MgT------------------RsGdiDp~~v~-~l~~~~~-~s 259 (403)
T 2iir_A 201 LKIITCHIGNGASVA-AVKYGKCVDTSMGFTPLEGLVMGT------------------RSGDLDPAIPF-FIMEKEG-IS 259 (403)
T ss_dssp CEEEEEEESSSEEEE-EEETTEEEEESCCSSTTSSSCCSS------------------CCCSCCTTHHH-HHHHHHT-CC
T ss_pred CCEEEEEeCCCeeee-eeECCEEEEeCCCCCCCCCCCCCC------------------CCCCCChHHHH-HHHHhcC-CC
Confidence 378999999998655 558999764 222211 1111 11222222222 2222223 24
Q ss_pred hhhHHHHhccCCChH----HHhchhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccE
Q 020972 221 PDELIGWTYVDPSWA----RIAALVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPL 296 (319)
Q Consensus 221 ~~~l~~~~~~~~~~~----~~a~~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~i 296 (319)
.+++...++.+.... .+....+.|.+++.+||+.|+..++-++..+++.|..+...++- -.-|
T Consensus 260 ~~ei~~~Lnk~SGLlgls~G~s~D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~~a~Lgg-------------vDaI 326 (403)
T 2iir_A 260 PQEMYDILNKKSGVYGLSKGFSSDMRDIEEAALKGDEWCKLVLEIYDYRIAKYIGAYAAAMNG-------------VDAI 326 (403)
T ss_dssp HHHHHHHHHHSCHHHHHTTTSCSCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTC-------------CSEE
T ss_pred HHHHHHHHhhcCCeeEecCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CCEE
Confidence 444544444322110 11223678888888999999999999999999999999988863 1379
Q ss_pred EEEcchhhhcHHHHHHHHhhc
Q 020972 297 LMENILFLLSWLVVFLKLIEG 317 (319)
Q Consensus 297 vl~Gg~~~~~~~~~~~~~~~~ 317 (319)
|+-||+-. ....+...++++
T Consensus 327 VFTgGIGE-ns~~vR~~i~~~ 346 (403)
T 2iir_A 327 VFTAGVGE-NSPITREDVCSY 346 (403)
T ss_dssp EEEHHHHT-TCHHHHHHHHHT
T ss_pred EECccccc-CCHHHHHHHHhh
Confidence 99999994 445666666653
No 74
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=94.28 E-value=0.62 Score=43.90 Aligned_cols=64 Identities=14% Similarity=0.073 Sum_probs=51.9
Q ss_pred hhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhhc
Q 020972 240 LVPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIEG 317 (319)
Q Consensus 240 ~~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~~ 317 (319)
..+.|.+++.+||+.|+..++-++..+++.|..+...|+- -.-||+-||+-. ....+...++++
T Consensus 291 D~R~l~~~~~~Gd~~A~lA~d~f~yri~k~IGa~aa~Lgg-------------vDaIVFTgGIGE-ns~~vR~~i~~~ 354 (415)
T 2e1z_A 291 DLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLHR-------------LDGIIFTGGIGE-NSVLIRQLVIEH 354 (415)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTTCSS-------------CCEEEEEHHHHH-HCHHHHHHHHHT
T ss_pred CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CCEEEECccccc-cCHHHHHHHHhh
Confidence 3677888888999999999999999999999999987742 247999999994 444666666654
No 75
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=93.98 E-value=1 Score=41.94 Aligned_cols=62 Identities=15% Similarity=0.044 Sum_probs=50.2
Q ss_pred hHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 241 VPVVVSCAEAGDEVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 241 ~~~v~~~A~~GD~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
.+.|.+++++||+.|+.+++-++..+++.|..+...|+- ...||+-||+..++ ..+...+++
T Consensus 275 ~R~l~~~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~g-------------vDaIVFTgGIgEns-~~iR~~i~~ 336 (384)
T 3khy_A 275 MREVSQLAAKGDSLAKLAIEIFSHRVAKFVASYMIYFNK-------------LDALVFTGGIGENA-ANIRKNIIS 336 (384)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHGGGCSS-------------CCEEEEEHHHHHHC-HHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CCEEEECCccccCc-HHHHHHHHh
Confidence 577888889999999999999999999999999887752 24799999999544 455555554
No 76
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=93.89 E-value=0.83 Score=42.74 Aligned_cols=64 Identities=11% Similarity=0.121 Sum_probs=50.5
Q ss_pred hhHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchhhhcHHHHHHHHhh
Q 020972 240 LVPVVVSCAEAGD---EVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILFLLSWLVVFLKLIE 316 (319)
Q Consensus 240 ~~~~v~~~A~~GD---~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~~~~~~ 316 (319)
..+.|.+++++|| +.|+.+++-++..+++.|..+...|+-. .-||+-||+-.++. .+...++|
T Consensus 284 D~R~i~~~~~~gd~~~~~A~lA~d~f~yri~k~IGa~aa~L~Gv-------------DaIVFTgGIGEns~-~vR~~i~~ 349 (404)
T 4h0o_A 284 DMRDILHEIETRGPKAKTCQLAFDVYIKQLAKTIGGLMVEIGGL-------------DLLVFTDQMGLEVW-QVRKAICD 349 (404)
T ss_dssp CHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-------------SEEEEEHHHHHHCH-HHHHHHHH
T ss_pred CHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------------CEEEECCccccCcH-HHHHHHHh
Confidence 3577888889999 9999999999999999999988877631 37999999974544 45566555
Q ss_pred c
Q 020972 317 G 317 (319)
Q Consensus 317 ~ 317 (319)
+
T Consensus 350 ~ 350 (404)
T 4h0o_A 350 K 350 (404)
T ss_dssp H
T ss_pred h
Confidence 3
No 77
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=93.26 E-value=0.19 Score=46.09 Aligned_cols=81 Identities=19% Similarity=0.140 Sum_probs=40.3
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
++||+||||-++|+++.+. +|++ ...+.+ .+.+ .+.+. +.++++++..+ +....|-+
T Consensus 1 ~iiG~DIGGAn~K~a~~~~---------~g~~-~~~~~~-~PlW-~~~~~----L~~~l~~~~~~-------~~~~avtM 57 (334)
T 3cet_A 1 MILGIDIGGANTKITELHE---------NGEF-KVHHLY-FPMW-KNNDK----LAEVLKTYSND-------VSHVALVT 57 (334)
T ss_dssp CEEEEEEC--CEEEEEECS---------TTCC-EEEEC----------------------------------CCEEEEEE
T ss_pred CeeEEEecccceeeeeecC---------CCce-EEEEEe-cCCc-CCchH----HHHHHHHHHhh-------hccEEEEe
Confidence 4799999999999999887 8887 444432 2222 34333 44444444332 23456888
Q ss_pred cCC-----CCchhH-HHHHHHHHhhCCCCceE
Q 020972 103 SGV-----NHPTDQ-QRILNWLRDIFPGNVRL 128 (319)
Q Consensus 103 pG~-----~~~~~~-~~l~~~L~~~~~~~~pv 128 (319)
.|= .++.++ ..|.+.+++.|+ .||
T Consensus 58 TgELaD~f~~k~eGV~~I~~~v~~~~~--~~v 87 (334)
T 3cet_A 58 TAELADSYETKKEGVDNILNAAESAFG--SNI 87 (334)
T ss_dssp CCC------CTTHHHHHHHHHHHHHHT--TCE
T ss_pred chhhhhhhcCHHHHHHHHHHHHHHhcC--Cce
Confidence 883 223334 357777888886 575
No 78
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=92.73 E-value=1.4 Score=39.91 Aligned_cols=135 Identities=11% Similarity=0.094 Sum_probs=83.5
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCC--CeEEEEecCCCCcc-------ccCHHHHHHHHHHHHHHHH---
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCSNHN-------SVGEDAARETIEKVMADAL--- 85 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G--~il~~~~~~~~~~~-------~~~~~~~~~~i~~~i~~~l--- 85 (319)
.|+| .+.+||+|...++..+++.. ++ +++.+.+.+. ... ..+ ++.+++..++++++.
T Consensus 9 ~~~m-~~a~IDiGSns~rl~I~~~~--------~~~~~~i~~~k~~v-rLg~g~~~~g~ls-~eai~r~~~~L~~f~~~~ 77 (315)
T 1t6c_A 9 KPIM-RVASIDIGSYSVRLTIAQIK--------DGKLSIILERGRIT-SLGTKVKETGRLQ-EDRIEETIQVLKEYKKLI 77 (315)
T ss_dssp -CCE-EEEEEEECSSEEEEEEEEEE--------TTEEEEEEEEEEEC-CTTTTHHHHSSCC-HHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEECcCcEEEEEEEEc--------CCcEEEEeeeeEEe-ecCCCccccCCcC-HHHHHHHHHHHHHHHHHH
Confidence 4544 68899999999999999972 33 2344433321 110 011 344555555555444
Q ss_pred HHcCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHH---hh--cCC-CCCeEEEEECcccee
Q 020972 86 LKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALA---SG--TMG-KLHGCVLIAGTGTIA 159 (319)
Q Consensus 86 ~~~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~---g~--~~g-~~~~v~v~~GTGigg 159 (319)
+..++ +++. .++.+..-+..+...+.+.+++.++ .++.|-+...=|.+ |. ..+ ..+++++=+|-|+--
T Consensus 78 ~~~~v--~~i~--~vATsA~R~A~N~~~fl~~v~~~~G--~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStE 151 (315)
T 1t6c_A 78 DEFKV--ERVK--AVATEAIRRAKNAEEFLERVKREVG--LVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTE 151 (315)
T ss_dssp HHTTC--SEEE--EEECHHHHTSTTHHHHHHHHHHHTC--CCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEE
T ss_pred HHCCC--CeEE--EEEcHHHHcCcCHHHHHHHHHHHHC--CCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEE
Confidence 34443 2343 3677776555666778888998887 88988888764433 32 233 457899999999977
Q ss_pred EeEecCCcEE
Q 020972 160 YGFTEDGRDA 169 (319)
Q Consensus 160 ~gii~dG~~~ 169 (319)
..+..++++.
T Consensus 152 l~~~~~~~~~ 161 (315)
T 1t6c_A 152 YVFGKGYKVR 161 (315)
T ss_dssp EEEEETTEEE
T ss_pred EEEEeCCcee
Confidence 6565566653
No 79
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=92.38 E-value=1 Score=41.30 Aligned_cols=45 Identities=13% Similarity=0.023 Sum_probs=29.6
Q ss_pred ceEEEeCcHHHHHHhhc----CC-CCCeEEEEECccceeEeEecCCcEEe
Q 020972 126 VRLYVHNDALAALASGT----MG-KLHGCVLIAGTGTIAYGFTEDGRDAR 170 (319)
Q Consensus 126 ~pv~v~NDa~aa~~g~~----~g-~~~~v~v~~GTGigg~gii~dG~~~r 170 (319)
.++.++++..+++++.. .. ....+++-+|.|..-..++.+|++..
T Consensus 166 ~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~ 215 (377)
T 2ych_A 166 VPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA 215 (377)
T ss_dssp EEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE
T ss_pred ceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE
Confidence 46777888777655421 11 22357888998887777777887654
No 80
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=92.35 E-value=1.5 Score=44.77 Aligned_cols=98 Identities=14% Similarity=0.087 Sum_probs=59.5
Q ss_pred cEEEEEEcC-ccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEE
Q 020972 22 EVILGLDGG-TTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCL 100 (319)
Q Consensus 22 ~~~lGIDiG-GTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igi 100 (319)
..+||+|-| .|.++++++|. +|+++.....-+..+. ...+...+.+. +++.++. +..|+|
T Consensus 329 ~~vlg~dpg~r~g~k~a~vd~---------~G~~l~~~~iy~~~~~-~~~~~~~~~l~----~li~~~~-----~~~IaI 389 (785)
T 3bzc_A 329 RATLGLDPGLRTGVKVAVVDA---------TGKLLDTATVYPHAPK-NQWDQTLAVLA----ALCAKHQ-----VELIAI 389 (785)
T ss_dssp CCEEEEECCSSSCEEEEEECT---------TSCEEEEEEECCSGGG-CCHHHHHHHHH----HHHHHHT-----CCEEEE
T ss_pred CeEEEECCCCcCceEEEEECC---------CCCEEEEEEEecCCch-hHHHHHHHHHH----HHHHHcC-----CCEEEE
Confidence 479999999 69999999999 9999998876444332 23344444444 4455443 334555
Q ss_pred eecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHH
Q 020972 101 AVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALA 139 (319)
Q Consensus 101 g~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~ 139 (319)
|- |.-+.+...-+.+.+++.-...+|+.+.|++-+-.+
T Consensus 390 Gn-gtasret~~~v~~l~~~~~~~~i~~v~v~e~gArvy 427 (785)
T 3bzc_A 390 GN-GTASRETDKLAGELIKKYPGMKLTKIMVSEAGASVY 427 (785)
T ss_dssp ES-STTHHHHHHHHHHHHHHCGGGCCEEEEECCHHHHHH
T ss_pred CC-CccCHHHHHHHHHHHHhcccCCCCEEEEcCCcCCHH
Confidence 53 333333333344444432101278999999887555
No 81
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=92.27 E-value=3.9 Score=37.56 Aligned_cols=91 Identities=18% Similarity=0.243 Sum_probs=61.5
Q ss_pred HHHHHHHHHHH-HcCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCeEEEEEC
Q 020972 76 TIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAG 154 (319)
Q Consensus 76 ~i~~~i~~~l~-~~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g~~~~v~v~~G 154 (319)
.+.++++.++. ..+.++. -..+-+..|-.........+.+.+-+.++. .-+++.|..-+|+++. |..++++|=+|
T Consensus 81 ~~e~i~~~~~~~~L~~~~~-~~~vvit~p~~~~~~~r~~~~e~~fe~~g~-~~~~~~~e~~aaa~a~--g~~~~lVvDiG 156 (375)
T 2fxu_A 81 DMEKIWHHTFYNELRVAPE-EHPTLLTEAPLNPKANREKMTQIMFETFNV-PAMYVAIQAVLSLYAS--GRTTGIVLDSG 156 (375)
T ss_dssp HHHHHHHHHHHTTSCCCGG-GSCEEEEECTTCCHHHHHHHHHHHHHTTCC-SEEEEEEHHHHHHHHT--TCSSEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCc-CCcEEEEeCCCCcHHHHHHHHHHHHHhcCc-ceEEEccchheeeeec--CCCeEEEEEcC
Confidence 34555555653 3344443 234678888777665556677777667762 3499999999998864 44689999999
Q ss_pred ccceeEeEecCCcEEe
Q 020972 155 TGTIAYGFTEDGRDAR 170 (319)
Q Consensus 155 TGigg~gii~dG~~~r 170 (319)
.|.--...+.+|....
T Consensus 157 ~gtt~v~~v~~G~~~~ 172 (375)
T 2fxu_A 157 DGVTHNVPIYEGYALP 172 (375)
T ss_dssp SSCEEEEEEETTEECG
T ss_pred CCceEEeEeECCEEec
Confidence 9986655677886543
No 82
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=92.15 E-value=3.7 Score=34.99 Aligned_cols=96 Identities=15% Similarity=0.095 Sum_probs=66.6
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
.+|+||--...+.+++++ +++++.+..... .. . .+.|...++++++++++...++.+|.++.
T Consensus 3 ~iLaIdTS~~~~svAl~~----------~~~~~~~~~~~~-~~---H----s~~L~p~i~~~L~~a~~~~~dld~Iav~~ 64 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV----------NDQVISRSEVAP-RD---H----TKKVLPMVDEVLKEAGLTLQDLDALAFGR 64 (213)
T ss_dssp CEEEEECSSSEEEEEEES----------SSCEEEEEEECC-SC---C----HHHHHHHHHHHHHTTTCCTTTCSEEEEEE
T ss_pred EEEEEEccCcceEEEEEE----------CCEEEEEEEech-HH---H----HHHHHHHHHHHHHHcCCCHHHccEEEEec
Confidence 599999888888999987 478877754321 11 2 24566788899999999888999988764
Q ss_pred cCCCCchh---HHHHHHHHHhhCCCCceEEEeCcHHHHHH
Q 020972 103 SGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (319)
Q Consensus 103 pG~~~~~~---~~~l~~~L~~~~~~~~pv~v~NDa~aa~~ 139 (319)
||.+... +....+-|...++ +|++=.|--.+-++
T Consensus 65 -GPGsfTglRig~~~AkgLa~~~~--iPl~gVstL~a~a~ 101 (213)
T 3r6m_A 65 -GPGSFTGVRIGIGIAQGLAFGAE--LPMIGVSTLAAMAQ 101 (213)
T ss_dssp -ESSCHHHHHHHHHHHHHHHHHTT--CCEEEEEHHHHHHH
T ss_pred -CCCchhhHHHHHHHHHHHHHHhC--CCEEEEcCHHHHHH
Confidence 4444322 3445666766676 89888876665444
No 83
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=90.95 E-value=5.2 Score=34.14 Aligned_cols=97 Identities=8% Similarity=-0.071 Sum_probs=67.6
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEe
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLA 101 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig 101 (319)
.++|+||--...+.+++++. ++++ +....... .-.+.|...|+++++++++...++.+|.++
T Consensus 12 ~~iLaidTS~~~~sval~~~----------~~~l-~~~~~~~r-------~Hse~L~p~i~~~L~~a~~~~~dld~Iav~ 73 (218)
T 2a6a_A 12 HMNVLALDTSQRIRIGLRKG----------EDLF-EISYTGEK-------KHAEILPVVVKKLLDELDLKVKDLDVVGVG 73 (218)
T ss_dssp -CEEEEEECSSSEEEEEEET----------TEEE-EEEEESCG-------GGGGHHHHHHHHHHHHHTCCGGGCSEEEEE
T ss_pred ceEEEEEcCCcCeEEEEEEC----------CEEE-EEEecchH-------HHHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 47999999999999999984 6677 43321111 112457778888999999999999999886
Q ss_pred ecCCCCchh---HHHHHHHHHhhCCCCceEEEeCcHHHHHH
Q 020972 102 VSGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (319)
Q Consensus 102 ~pG~~~~~~---~~~l~~~L~~~~~~~~pv~v~NDa~aa~~ 139 (319)
. ||.+... +....+-|...++ +|++=.|--.+-++
T Consensus 74 ~-GPGsfTGlRiG~~~Ak~La~~~~--iPl~gVs~l~a~a~ 111 (218)
T 2a6a_A 74 I-GPGGLTGLRVGIATVVGLVSPYD--IPVAPLNSFEMTAK 111 (218)
T ss_dssp C-CSSCHHHHHHHHHHHHHHHGGGT--CCEEEECHHHHHHH
T ss_pred c-CCCchHhHHHHHHHHHHHHHHcC--CCEEEeCcHHHHHh
Confidence 3 5554432 3455667776776 89988887765544
No 84
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=90.37 E-value=9.7 Score=34.17 Aligned_cols=73 Identities=15% Similarity=0.141 Sum_probs=51.3
Q ss_pred ceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcC---CCCCeEEEEECccceeEeEecCCcEEe
Q 020972 96 RAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM---GKLHGCVLIAGTGTIAYGFTEDGRDAR 170 (319)
Q Consensus 96 ~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~---g~~~~v~v~~GTGigg~gii~dG~~~r 170 (319)
..+.+++|-..+......+.+.++. .+. ..+.+.|+..+|+++... .....+++=+|-|.--..++..|.+..
T Consensus 96 ~~~vitvP~~~~~~~r~~~~~a~~~-aG~-~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~~ 171 (344)
T 1jce_A 96 PRVVIGVPIGITDVERRAILDAGLE-AGA-SKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVT 171 (344)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHH-TTC-SEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHH-cCC-CeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEEe
Confidence 5677999987666556667776654 442 468999999998886432 224678899998886666766776553
No 85
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=90.37 E-value=4.3 Score=37.77 Aligned_cols=91 Identities=20% Similarity=0.230 Sum_probs=60.7
Q ss_pred HHHHHHHHHHH-cCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc-------CCCCCe
Q 020972 77 IEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT-------MGKLHG 148 (319)
Q Consensus 77 i~~~i~~~l~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~-------~g~~~~ 148 (319)
..++++.++.+ .+.++. ...+-+..|-..+......+.+.+-+.++. ..+++.|++.+|+++.+ .+. ++
T Consensus 89 ~e~i~~~~~~~~L~~~~~-~~~vvit~p~~~~~~~r~~~~e~~fe~~g~-~~~~l~~ep~aa~~a~~~~~~~~~~~~-~g 165 (418)
T 1k8k_A 89 MERFMEQVIFKYLRAEPE-DHYFLLTEPPLNTPENREYTAEIMFESFNV-PGLYIAVQAVLALAASWTSRQVGERTL-TG 165 (418)
T ss_dssp HHHHHHHHHHTTTCCCGG-GCCEEEEECTTCCHHHHHHHHHHHHHTSCC-SEEEEEEHHHHHHHHGGGSTTCCSCCC-CE
T ss_pred HHHHHHHHHHhccCCCCC-CCcEEEEeCCCCCHHHHHHHHHHHHHhcCC-CEEEEechHHHHhhhhhcccccCCCCC-eE
Confidence 34445555532 344443 346778889877666666777777566762 35899999999888632 344 78
Q ss_pred EEEEECccceeEeEecCCcEEe
Q 020972 149 CVLIAGTGTIAYGFTEDGRDAR 170 (319)
Q Consensus 149 v~v~~GTGigg~gii~dG~~~r 170 (319)
++|-+|.|.--...+.+|....
T Consensus 166 lVvDiG~gtt~v~~v~~G~~~~ 187 (418)
T 1k8k_A 166 TVIDSGDGVTHVIPVAEGYVIG 187 (418)
T ss_dssp EEEEESSSCEEEEEEETTEECG
T ss_pred EEEEcCCCceEEEEeECCEEcc
Confidence 9999999986666677887543
No 86
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=88.91 E-value=9.6 Score=35.17 Aligned_cols=67 Identities=9% Similarity=-0.042 Sum_probs=44.2
Q ss_pred ccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCC------CCCeEEEEECccceeEeE
Q 020972 94 AVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG------KLHGCVLIAGTGTIAYGF 162 (319)
Q Consensus 94 ~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g------~~~~v~v~~GTGigg~gi 162 (319)
++..+.+++|-.-+......+++..+.. +. ..+.+.|+..||+++-... ....+++=+|-|..-..+
T Consensus 149 ~~~~~vitvPa~~~~~~r~~~~~a~~~A-Gl-~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv 221 (409)
T 4gni_A 149 KVTSAVITIPTNFTEKQKAALIAAAAAA-DL-EVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTV 221 (409)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHT-TC-EEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEE
T ss_pred CCCeEEEEECCCCCHHHHHHHHHHHHHc-CC-CeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEE
Confidence 4567789999987766666677766654 32 4688999999888763221 123566778877644433
No 87
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=88.85 E-value=4.9 Score=36.24 Aligned_cols=135 Identities=12% Similarity=0.103 Sum_probs=82.0
Q ss_pred CCcEEEEEEcCccceeEEEEeCccCCCCCCCCC--CeEEEEecCCC---Ccc---ccCHHHHHHHHHHHHHHH---HHHc
Q 020972 20 GREVILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCS---NHN---SVGEDAARETIEKVMADA---LLKS 88 (319)
Q Consensus 20 m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G--~il~~~~~~~~---~~~---~~~~~~~~~~i~~~i~~~---l~~~ 88 (319)
|+..+..||+|..+++..+++.. ++ +++.+.+.+.. ... ..+ ++.+++..++++++ ++..
T Consensus 2 m~~~~A~IDiGSNsirL~I~~~~--------~~~~~~i~~~k~~vrLg~g~~~~g~ls-~eai~r~~~~L~~f~~~~~~~ 72 (315)
T 3mdq_A 2 MSQRIGVIDMGTNTFHLLITDIV--------NDRPHTLVNEKSAVGLGKGGITKGFIT-EEAMDRALDTLKKFRVILDEH 72 (315)
T ss_dssp --CEEEEEEECSSEEEEEEEEEE--------TTEEEEEEEEEEECCSSTTTGGGTCCC-HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEEecCCcEEEEEEEEc--------CCceEEeeeceeeeeccccccccCCcC-HHHHHHHHHHHHHHHHHHHHc
Confidence 66779999999999999999862 23 33444433210 000 112 34455555555544 4444
Q ss_pred CCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHH---HHhh--cCC--CCCeEEEEECccceeEe
Q 020972 89 GSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASG--TMG--KLHGCVLIAGTGTIAYG 161 (319)
Q Consensus 89 ~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa---~~g~--~~g--~~~~v~v~~GTGigg~g 161 (319)
++ +++. .++.+.+-+..+...+.+.+++.++ .++.|-+.-.=| .+|. ... ..+.+++=+|.||--..
T Consensus 73 ~v--~~v~--~vATsA~R~A~N~~~fl~~i~~~tG--~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~ 146 (315)
T 3mdq_A 73 AV--VHVI--ATGTSAVRSGSNKQVLIDRIKKEVN--IDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFI 146 (315)
T ss_dssp TC--CEEE--EEECHHHHHCTTHHHHHHHHHHHHC--CCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEE
T ss_pred CC--CEEE--EEeeHHHHcCcCHHHHHHHHHHHHC--CCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEE
Confidence 44 2343 4666666444556778888988887 888888776633 3332 122 35789999999997766
Q ss_pred EecCCcEE
Q 020972 162 FTEDGRDA 169 (319)
Q Consensus 162 ii~dG~~~ 169 (319)
+..++++.
T Consensus 147 ~~~~~~~~ 154 (315)
T 3mdq_A 147 IGNKNEIL 154 (315)
T ss_dssp EECSSCEE
T ss_pred EEECCeEe
Confidence 66666654
No 88
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=88.15 E-value=0.74 Score=42.09 Aligned_cols=35 Identities=20% Similarity=0.040 Sum_probs=27.4
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecC
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG 61 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~ 61 (319)
..|..++|+||-|.|++|+-++|. +|+++.+.+.+
T Consensus 3 ~~~~~~~IavDWGTSnlRa~l~~~---------~g~vl~~~~~~ 37 (330)
T 3t69_A 3 MTTAGYYAAVDWGTSSFRLWIIGE---------DGAVLAERRSA 37 (330)
T ss_dssp -----CEEEEEECSSCEEEEEECT---------TSCEEEEEEES
T ss_pred cCCCCCEEEEEecchheehheecC---------CCCchhhhcCC
Confidence 445668999999999999999998 89999987753
No 89
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=87.64 E-value=1.1 Score=43.78 Aligned_cols=60 Identities=18% Similarity=0.193 Sum_probs=41.1
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCC--CeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSN 91 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G--~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 91 (319)
+|+.|+|||.|+|.+++.+.. +| +++.....+++.. .+--.-+..+.+.+++++++++..
T Consensus 2 ~~i~GiDIGnsttev~l~~~~--------~g~i~~l~~g~~~ttGi--KGt~~Ni~g~~~si~~a~~~a~~~ 63 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDY--------PQARAFVASGIVATTGM--KGTRDNIAGTLAALEQALAKTPWS 63 (607)
T ss_dssp CEEEEEEECSSEEEEEEEECB--------TTBCCCCEEEEEECCSS--TTSGGGHHHHHHHHHHHHTTSSCC
T ss_pred cEEEEEEecCceEEEEEEEEc--------CCeEEEEEeecccCCcc--ceeeeCHHHHHHHHHHHHHHhCCc
Confidence 699999999999999988752 34 5677777665543 232333445666677777777655
No 90
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=87.48 E-value=10 Score=36.62 Aligned_cols=134 Identities=12% Similarity=0.074 Sum_probs=83.7
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCC--CeEEEEecCCC---CccccC--HHHHHHHHHHHHHHHHHHcC-CCccc
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCS---NHNSVG--EDAARETIEKVMADALLKSG-SNRSA 94 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G--~il~~~~~~~~---~~~~~~--~~~~~~~i~~~i~~~l~~~~-~~~~~ 94 (319)
.+..||+|..+++..+++.. ++ +++.+.+.+.. .....+ .++.+++..++++++.+... ...++
T Consensus 12 ~~AaIDiGSNSirL~I~~~~--------~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~~~~~v~~ 83 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIARVV--------DGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPAS 83 (513)
T ss_dssp CEEEEEECSSCEEEEEEEEE--------TTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHTTTCCGGG
T ss_pred eEEEEEeccccEEEEEEEEc--------CCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHHHhCCCCE
Confidence 58999999999999999862 23 33444443211 000011 14567777777777766543 22233
Q ss_pred cceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHH---HHhh--cCC-CCCeEEEEECccceeEeEecCCcE
Q 020972 95 VRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASG--TMG-KLHGCVLIAGTGTIAYGFTEDGRD 168 (319)
Q Consensus 95 i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa---~~g~--~~g-~~~~v~v~~GTGigg~gii~dG~~ 168 (319)
+. .++.+..=+..+...+.+.+++.++ .++.|-+--.=| .+|. ... .++.+++=+|.||--..+..++++
T Consensus 84 v~--~vATsA~R~A~N~~~fl~~i~~~tG--~~i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~ 159 (513)
T 1u6z_A 84 VC--IVGTHTLRQALNATDFLKRAEKVIP--YPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEP 159 (513)
T ss_dssp EE--EEECHHHHHCTTHHHHHHHHTTTCS--SCEEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEE
T ss_pred EE--EEecHHHHcCcCHHHHHHHHHHHHC--CCEEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCee
Confidence 43 4666665445556778888999987 888888876533 3332 122 236899999999966544445554
No 91
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=87.12 E-value=1.5 Score=42.78 Aligned_cols=66 Identities=20% Similarity=0.127 Sum_probs=43.9
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCC--CeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G--~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (319)
+|+.|||||-+.|.++|.+.. ++| +.+.+...+++.. .+-.+-+.-+.+++++++++.+.+.+++.
T Consensus 2 ~~i~gvdign~tte~~la~~~-------~~~~~~f~~s~~~~ttg~--kgt~~n~~g~~~~l~~~~~~~~~~~~~~~ 69 (610)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLD-------EAGALTITHSALAETTGI--KGTLRNVFGIQEALALVARGAGIAVSDIS 69 (610)
T ss_dssp EEEEEEEECSSEEEEEEEEEC-------TTCCEEEEEEEEEECCSS--TTSTTHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred cEEEEEecCCcchheeeeeec-------CCCceEEeeccccccCCc--cCcHHHHHHHHHHHHHHHHHcCCChhhce
Confidence 689999999999998887651 024 4566666555543 23333445567777888888887665544
No 92
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=86.61 E-value=3.4 Score=43.44 Aligned_cols=98 Identities=11% Similarity=0.149 Sum_probs=57.5
Q ss_pred cEEEEEEcCc-c----ceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 020972 22 EVILGLDGGT-T----STVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (319)
Q Consensus 22 ~~~lGIDiGG-T----k~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (319)
..++|+|-|- | .++++++|. +|+++...++.+........+...+ .+.+++.++ ++.
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~---------~G~~l~~~~i~~~~~~~~~~~~~~~----~l~~li~~~-----~~~ 580 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNR---------KGDFIRDYKIVDNPFDKTNPEKFED----TLDNIIQSC-----QPN 580 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECT---------TSCEEEEEEECSCTTCSSCCHHHHH----HHHHHHHHH-----CCS
T ss_pred CeEEEecCCCCCCCCCCeEEEEECC---------CCCEEEEEEEcCCCCChhhHHHHHH----HHHHHHHHc-----CCc
Confidence 4799999983 2 799999999 9999999887422111112233333 344455554 344
Q ss_pred eEEEeecCCCCchhH---HHHHHHHHhh-C----CCCceEEEeCcHHHHHHh
Q 020972 97 AVCLAVSGVNHPTDQ---QRILNWLRDI-F----PGNVRLYVHNDALAALAS 140 (319)
Q Consensus 97 ~Igig~pG~~~~~~~---~~l~~~L~~~-~----~~~~pv~v~NDa~aa~~g 140 (319)
.|+||-. +.+.. ..+.+.+++. + +..+++.+.|++-|..+.
T Consensus 581 ~IaIGn~---s~et~~l~~~l~~~i~~~~~~~~~~~~i~~~iV~e~gAsvYs 629 (1030)
T 3psf_A 581 AIGINGP---NPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQ 629 (1030)
T ss_dssp EEEECCS---STHHHHHHHHHHHHHHHTTCBCTTSCBCCEEECCCTTHHHHH
T ss_pred EEEECCC---CHHHHHHHHHHHHHHHhhccccccCCCccEEEecchHHHHHH
Confidence 5556532 22221 2344444432 1 112789999999887664
No 93
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=86.06 E-value=3.7 Score=35.33 Aligned_cols=96 Identities=15% Similarity=0.041 Sum_probs=64.2
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccceEEEee
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVRAVCLAV 102 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~ 102 (319)
++|+||--...+.+++++. ++++.+..... .. .. +.+...|+++++++++...+|.+|.++.
T Consensus 2 ~iL~idTs~~~~sval~~~----------~~~~~~~~~~~-~~---h~----~~l~~~i~~~L~~a~~~~~did~Iav~~ 63 (231)
T 2gel_A 2 RILAIDTATEACSVALWNN----------GTINAHFELCP-RE---HT----QRILPMVQEILAASGASLNEIDALAFGR 63 (231)
T ss_dssp EEEEEECSSSEEEEEEEET----------TEEEEEEEECC-SC---CH----HHHHHHHHHHHHHTTCCGGGCSEEEEEC
T ss_pred eEEEEECCCcCeEEEEEEC----------CEEEEEEhhhh-HH---HH----HHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence 6899998888888999874 66665433211 11 12 3477888889999999999999998863
Q ss_pred cCCCCchh---HHHHHHHHHhhCCCCceEEEeCcHHHHHH
Q 020972 103 SGVNHPTD---QQRILNWLRDIFPGNVRLYVHNDALAALA 139 (319)
Q Consensus 103 pG~~~~~~---~~~l~~~L~~~~~~~~pv~v~NDa~aa~~ 139 (319)
|+..... +....+-|...++ +|++-.|--.+-++
T Consensus 64 -GPGsftglRig~~~ak~la~~~~--~Pl~~V~~l~a~a~ 100 (231)
T 2gel_A 64 -GPGSFTGVRIGIGIAQGLALGAN--LPMIGVSTLATMAQ 100 (231)
T ss_dssp -CSSCHHHHHHHHHHHHHHHHTTT--CCEEEECHHHHHHH
T ss_pred -CCChhHhHHHHHHHHHHHHHHcC--CCEEEeccHHHHHH
Confidence 4443322 2344555665565 89888876665443
No 94
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=85.66 E-value=20 Score=32.52 Aligned_cols=90 Identities=16% Similarity=0.033 Sum_probs=53.6
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcC--C-
Q 020972 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM--G- 144 (319)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~--g- 144 (319)
+++++...+.+.+.+..++ .+ .++..+.+++|-..+......+++..+. .+. ..+.+.|+..||+++... .
T Consensus 129 ~~~ei~a~~l~~l~~~a~~~~~---~~~~~~vitvP~~~~~~~r~~~~~a~~~-aGl-~~~~li~Ep~Aaa~~~~~~~~~ 203 (394)
T 3qfu_A 129 TPEEISGMILGKMKQIAEDYLG---TKVTHAVVTVPAYFNDAQRQATKDAGTI-AGL-NVLRIVNEPTAAAIAYGLDKSD 203 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---SCCCEEEEEECTTCCHHHHHHHHHHHHH-TTC-EEEEEEEHHHHHHHHTTTTSCS
T ss_pred cHHHHHHHHHHHHHHHHHHhcC---CCcceEEEEECCCCCHHHHHHHHHHHHH-cCC-ceEEEecCHHHHHHHHhhccCC
Confidence 4555555444444333322 22 2456778999998776666666666644 442 468999999998875321 1
Q ss_pred -CCCeEEEEECccceeEeEe
Q 020972 145 -KLHGCVLIAGTGTIAYGFT 163 (319)
Q Consensus 145 -~~~~v~v~~GTGigg~gii 163 (319)
....+++=+|.|..-..++
T Consensus 204 ~~~~vlV~D~Gggt~dvsv~ 223 (394)
T 3qfu_A 204 KEHQIIVYDLGGGTFDVSLL 223 (394)
T ss_dssp SCEEEEEEEECSSCEEEEEE
T ss_pred CCceEEEEEcCCCceeEEEE
Confidence 2245677788887544343
No 95
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=85.19 E-value=4.3 Score=43.42 Aligned_cols=98 Identities=11% Similarity=0.149 Sum_probs=57.6
Q ss_pred cEEEEEEcCc-----cceeEEEEeCccCCCCCCCCCCeEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcCCCccccc
Q 020972 22 EVILGLDGGT-----TSTVCICMPVISMSDSLPDPLPVLARAAAGCSNHNSVGEDAARETIEKVMADALLKSGSNRSAVR 96 (319)
Q Consensus 22 ~~~lGIDiGG-----Tk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 96 (319)
..++|+|-|- |.++++++|. +|+++...++.+........+...+ .+.+++.++ ++.
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~---------~G~vl~~~~i~~~~~~~~~~~~a~~----~l~~li~~~-----~~~ 577 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNR---------KGDFIRDYKIVDNPFDKTNPEKFED----TLDNIIQSC-----QPN 577 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECT---------TSCEEEEEEECSCTTCSSCSHHHHH----HHHHHHHHH-----CCS
T ss_pred CeEEEecCCCCCCCCCceEEEEECC---------CCCEEEEEEEcCCCCChhhHHHHHH----HHHHHHHHc-----CCc
Confidence 4799999983 2799999999 9999999887422111112233333 344455554 344
Q ss_pred eEEEeecCCCCchhH---HHHHHHHHhh-C----CCCceEEEeCcHHHHHHh
Q 020972 97 AVCLAVSGVNHPTDQ---QRILNWLRDI-F----PGNVRLYVHNDALAALAS 140 (319)
Q Consensus 97 ~Igig~pG~~~~~~~---~~l~~~L~~~-~----~~~~pv~v~NDa~aa~~g 140 (319)
.|+||-. +.+.. ..+.+.+++. + +..+++.+.|++-|..+.
T Consensus 578 vIaIGn~---sret~~l~~~l~~~i~~~~~~~~~~~~i~vviV~e~gAsvYs 626 (1219)
T 3psi_A 578 AIGINGP---NPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQ 626 (1219)
T ss_dssp EEEECCS---STHHHHHHHHHHHHHHHTTCBCSSSCBCCEEECCCTTHHHHH
T ss_pred EEEECCC---CHHHHHHHHHHHHHHHhhccccccCCCccEEEECchHHHHHh
Confidence 5556532 22221 2344444432 1 112789999999887764
No 96
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=84.84 E-value=10 Score=34.64 Aligned_cols=132 Identities=16% Similarity=0.080 Sum_probs=79.4
Q ss_pred CcEEEEEEcCccceeEEEEeCccCCCCCCCCC--CeEEEEecCCCCcc-------ccCHHHHHHHHHHHHHHHHHHcCC-
Q 020972 21 REVILGLDGGTTSTVCICMPVISMSDSLPDPL--PVLARAAAGCSNHN-------SVGEDAARETIEKVMADALLKSGS- 90 (319)
Q Consensus 21 ~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G--~il~~~~~~~~~~~-------~~~~~~~~~~i~~~i~~~l~~~~~- 90 (319)
...+..||+|..++|..+++... ++ +++.+.+.. .... ..+ ++.+++..++++++.+....
T Consensus 15 ~~~~A~IDiGSNsiRL~I~~~~~-------~~~~~~i~~~k~~-vrLg~g~~~~g~ls-~eai~r~~~aL~~f~~~~~~~ 85 (343)
T 3cer_A 15 SVTVAGIDCGTNSIRLKIARVDA-------DGMHEVVPRILRV-IRLGQDVDKTHRFA-DEALERAYVAAREFAGVIAEH 85 (343)
T ss_dssp CEEEEEEEECSSCEEEEEEEEET-------TEEEEEEEEEEEC-CCTTTTHHHHSSCC-HHHHHHHHHHHHHHHHHHTTS
T ss_pred CCeEEEEEcccceeEeEEEEEcC-------CCCEEEEEEEEEE-eeCCCCccccCCcC-HHHHHHHHHHHHHHHHHHHHC
Confidence 34789999999999999998610 23 234443332 1111 012 35566667777666554322
Q ss_pred CccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHH---HHHhh--cCC----CCCeEEEEECccceeEe
Q 020972 91 NRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALA---ALASG--TMG----KLHGCVLIAGTGTIAYG 161 (319)
Q Consensus 91 ~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~a---a~~g~--~~g----~~~~v~v~~GTGigg~g 161 (319)
..+++ ..++.+..=+..+...+.+.+++.++ .++.|-+--.= ..+|. ... ..+.+++=+|.|+--..
T Consensus 86 ~v~~v--~~vATsA~R~A~N~~~fl~~v~~~tG--i~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~ 161 (343)
T 3cer_A 86 PIDGL--RFVATSATRDAENREEFEDEIERILG--VRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELV 161 (343)
T ss_dssp CCSEE--EEEECHHHHHCTTHHHHHHHHHHHHS--SCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEE
T ss_pred CCCeE--EEEecHHHHcCcCHHHHHHHHHHHHC--CCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEE
Confidence 11233 34667666444556778888988887 77777776553 33343 222 25689999999996654
Q ss_pred EecC
Q 020972 162 FTED 165 (319)
Q Consensus 162 ii~d 165 (319)
+..+
T Consensus 162 ~~~~ 165 (343)
T 3cer_A 162 IGGD 165 (343)
T ss_dssp ECCC
T ss_pred Eeec
Confidence 4434
No 97
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=82.83 E-value=28 Score=31.76 Aligned_cols=90 Identities=14% Similarity=0.072 Sum_probs=54.7
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcC----
Q 020972 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM---- 143 (319)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~---- 143 (319)
.++++...+.+.+.+..+. .+ .++..+.+++|-.-+......+++..+.. +. ..+.+.|+..||+++...
T Consensus 134 ~~~ei~a~~L~~l~~~a~~~~~---~~~~~~vitvPa~~~~~~r~~~~~a~~~A-Gl-~~~~li~Ep~AAa~~~~~~~~~ 208 (404)
T 3i33_A 134 FPEEISSMVLTKMKEIAEAYLG---GKVHSAVITVPAYFNDSQRQATKDAGTIT-GL-NVLRIINEPTAAAIAYGLDKKG 208 (404)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHS---SCCCEEEEEECTTCCHHHHHHHHHHHHHH-TC-EEEEEEEHHHHHHHHTTTTSSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhc---cCCCcEEEEECCCCCHHHHHHHHHHHHHc-CC-CeEEEeccHHHHHHHHHhhccc
Confidence 4555555444444433332 22 24567889999887766656666666544 32 468999999998886321
Q ss_pred ---CCCCeEEEEECccceeEeEe
Q 020972 144 ---GKLHGCVLIAGTGTIAYGFT 163 (319)
Q Consensus 144 ---g~~~~v~v~~GTGigg~gii 163 (319)
.....+++=+|.|..-..++
T Consensus 209 ~~~~~~~vlV~D~GgGT~dvsv~ 231 (404)
T 3i33_A 209 CAGGEKNVLIFDLGGGTFDVSIL 231 (404)
T ss_dssp SSSSCCEEEEEEECSSCEEEEEE
T ss_pred ccCCCceEEEEECCCCcEEEEEE
Confidence 22345777788887554443
No 98
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=81.03 E-value=24 Score=33.76 Aligned_cols=90 Identities=14% Similarity=0.006 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcC---C
Q 020972 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTM---G 144 (319)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~---g 144 (319)
+++++...+.+-+.+..++ .+ .++..+.+++|-..+......+++..+. .+. ..+.+.|+..||+++-.. .
T Consensus 85 ~~~ei~a~~L~~l~~~ae~~l~---~~~~~~VitvPa~~~~~qr~a~~~a~~~-AGl-~~~~li~Ep~AAAlay~~~~~~ 159 (509)
T 2v7y_A 85 TPQEISAIILQYLKSYAEDYLG---EPVTRAVITVPAYFNDAQRQATKDAGRI-AGL-EVERIINEPTAAALAYGLDKEE 159 (509)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---SCCCEEEEEECTTCCHHHHHHHHHHHHH-TTC-EEEEEEEHHHHHHHHTTGGGSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCCCeEEEEECCCCCHHHHHHHHHHHHH-cCC-CeEEEecCHHHHHHHHhhccCC
Confidence 4666655544443332222 22 2456678999997766555666666543 442 468899999998875321 1
Q ss_pred CCCeEEEEECccceeEeEe
Q 020972 145 KLHGCVLIAGTGTIAYGFT 163 (319)
Q Consensus 145 ~~~~v~v~~GTGigg~gii 163 (319)
....+++=+|.|..-..++
T Consensus 160 ~~~vlV~D~GgGT~Dvsv~ 178 (509)
T 2v7y_A 160 DQTILVYDLGGGTFDVSIL 178 (509)
T ss_dssp SEEEEEEEECSSCEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEE
Confidence 2356777888887544443
No 99
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=80.41 E-value=29 Score=34.03 Aligned_cols=89 Identities=15% Similarity=0.044 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCC---
Q 020972 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG--- 144 (319)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g--- 144 (319)
+++++...+...+.+..+. .+. .+..+.|.+|-.-+......+++..+.. +. ..+.+.|+..||+++-...
T Consensus 111 ~p~ei~a~iL~~lk~~ae~~lg~---~v~~~VITVPa~f~~~qr~a~~~Aa~~A-Gl-~v~~li~EP~AAAlaygl~~~~ 185 (605)
T 4b9q_A 111 APPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYFNDAQRQATKDAGRIA-GL-EVKRIINEPTAAALAYGLDKGT 185 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTCCHHHHHHHHHHHHHT-TC-EEEEEEEHHHHHHHHHHTTSCC
T ss_pred CHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHHHHHHHc-CC-ceEEEeCcHHHHHHHhhhhccC
Confidence 4555555444433333322 232 4667789999887766556666666543 32 4689999999988864211
Q ss_pred -CCCeEEEEECccceeEeE
Q 020972 145 -KLHGCVLIAGTGTIAYGF 162 (319)
Q Consensus 145 -~~~~v~v~~GTGigg~gi 162 (319)
.+..+++=+|.|..-..+
T Consensus 186 ~~~~vlV~DlGGGT~Dvsi 204 (605)
T 4b9q_A 186 GNRTIAVYDLGGGAFDISI 204 (605)
T ss_dssp SSEEEEEEEECSSCEEEEE
T ss_pred CCCEEEEEECCCCeEEEEE
Confidence 234567778887644433
No 100
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=77.90 E-value=5.2 Score=35.85 Aligned_cols=34 Identities=12% Similarity=0.053 Sum_probs=29.2
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecC
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAG 61 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~ 61 (319)
+.|..++|+||-|.|++|+-++| +|+++.+.+.+
T Consensus 2 ~~m~~~~IavDWGTs~lRa~l~~----------~g~vl~~~~~~ 35 (295)
T 3nuw_A 2 NAMTARYIAIDWGSTNLRAWLYQ----------GEECLESRQSE 35 (295)
T ss_dssp CGGGCEEEEEEECSSCEEEEEEE----------TTEEEEEEEES
T ss_pred CCCCccEEEEEecchheeeeeec----------CCceehhhcCC
Confidence 56778999999999999999998 47999887753
No 101
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=77.34 E-value=8.6 Score=35.07 Aligned_cols=69 Identities=17% Similarity=0.043 Sum_probs=44.2
Q ss_pred ccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCC----CCCeEEEEECccceeEeEec
Q 020972 94 AVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG----KLHGCVLIAGTGTIAYGFTE 164 (319)
Q Consensus 94 ~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g----~~~~v~v~~GTGigg~gii~ 164 (319)
++..+.+++|-..+......+.+.++. .+. ..+.+.|+..||+++-... ....+++=+|.|..-..++.
T Consensus 134 ~~~~~vitvP~~~~~~~r~~~~~a~~~-aGl-~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~ 206 (383)
T 1dkg_D 134 PVTEAVITVPAYFNDAQRQATKDAGRI-AGL-EVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIE 206 (383)
T ss_dssp CCCEEEECBCTTCCHHHHHHHHHHHHH-TTC-EESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEE
T ss_pred CCCeEEEEECCCCCHHHHHHHHHHHHH-cCC-ceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEE
Confidence 345677899997666555666666644 442 3567899999888753322 23467778888875544443
No 102
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=76.68 E-value=28 Score=33.48 Aligned_cols=134 Identities=12% Similarity=0.063 Sum_probs=81.3
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEEEecCCC---Ccc---ccCHHHHHHHHHHHHHH---HHHHcCCCc
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLARAAAGCS---NHN---SVGEDAARETIEKVMAD---ALLKSGSNR 92 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~~~~~~~---~~~---~~~~~~~~~~i~~~i~~---~l~~~~~~~ 92 (319)
..+-.||+|..+++..+++... ..-.++.+.+.... ... ..+ ++.+++..++++. .++..++
T Consensus 15 ~~~AaIDiGSNS~rL~I~~~~~------~~~~~~~~~k~~vrLg~gl~~~g~Ls-~eai~r~~~~L~~F~~~~~~~~v-- 85 (508)
T 3hi0_A 15 APVSVIDIGSNSVRLVVYEGLS------RAPAVLFNEKVLCGLGKGLALTGRMH-EEGVTRALMALRRFHVLSEQAQA-- 85 (508)
T ss_dssp CCEEEEEECSSEEEEEEESCSS------SSCCEEEEEEEECCTTTTHHHHSSCC-HHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CeEEEEEECCccEEEEEEEEcC------CCceEEEEEeEEeecccCccccCCcC-HHHHHHHHHHHHHHHHHHHhCCC--
Confidence 4689999999999999998620 02345555432110 000 012 3445665565555 4444544
Q ss_pred cccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHH---HHhhc--CCCCCeEEEEECccceeEeEecCCc
Q 020972 93 SAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAA---LASGT--MGKLHGCVLIAGTGTIAYGFTEDGR 167 (319)
Q Consensus 93 ~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa---~~g~~--~g~~~~v~v~~GTGigg~gii~dG~ 167 (319)
+++. .++.+..=+..+...+.+.+++.++ .|+.|-+--.=| .+|.. ....+++++=+|.||-=..+..+++
T Consensus 86 ~~v~--~vATsA~R~A~N~~~fl~~i~~~tG--~~ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~ 161 (508)
T 3hi0_A 86 QKLY--VLATAAAREAENGPDFIREAEAILG--CEIEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKS 161 (508)
T ss_dssp SEEE--EEECTHHHHSTTHHHHHHHHHHHHT--SCEEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTE
T ss_pred CeEE--EEeeHHHHcCcCHHHHHHHHHHHHC--CCeEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCe
Confidence 2443 3566665445566778888988887 888887766533 33322 3345688999999996665555555
Q ss_pred E
Q 020972 168 D 168 (319)
Q Consensus 168 ~ 168 (319)
+
T Consensus 162 ~ 162 (508)
T 3hi0_A 162 C 162 (508)
T ss_dssp E
T ss_pred e
Confidence 4
No 103
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=74.76 E-value=15 Score=29.95 Aligned_cols=56 Identities=18% Similarity=0.121 Sum_probs=39.7
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCC------eEEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcC
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLP------VLARAAAGCSNHNSVGEDAARETIEKVMADALLKSG 89 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~------il~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~ 89 (319)
.+||||-|-++|=+++++. +|+ .+....+.+... .+..+-+..|.+.+.++++++.
T Consensus 2 rILGIDPGl~~tG~gvi~~---------~g~~~~~~~~v~~G~I~t~~~--~~~~~RL~~I~~~l~~~i~~~~ 63 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAV---------EGKGALKARLLHGEVVKTSPQ--EPAKERVGRIHARVLEVLHRFR 63 (166)
T ss_dssp EEEEEECCSSEEEEEEEEE---------CSSSSSCEEEEEEEEEECCTT--SCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEccccCceEEEEEEe---------cCCccceEEEEEeCeEECCCC--CCHHHHHHHHHHHHHHHHHHhC
Confidence 5899999999999999998 665 233333332221 3566667778888888888764
No 104
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=73.88 E-value=69 Score=31.89 Aligned_cols=95 Identities=15% Similarity=0.076 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHHHHHH-HcCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhc--C--
Q 020972 69 GEDAARETIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGT--M-- 143 (319)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~-~~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~--~-- 143 (319)
+++++...+.+-+.+..+ ..+ ..+..+.|++|-.-+......+++..+.. +. ..+.+.|+..||+++-. .
T Consensus 114 speei~a~~L~~lk~~ae~~lg---~~v~~~VITVPa~f~~~qR~a~~~Aa~~A-Gl-~~~~li~EP~AAAlaygl~~~~ 188 (675)
T 3d2f_A 114 SATQLAAMFIDKVKDTVKQDTK---ANITDVCIAVPPWYTEEQRYNIADAARIA-GL-NPVRIVNDVTAAGVSYGIFKTD 188 (675)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHC---SCCCEEEEEECTTCCHHHHHHHHHHHHHT-TC-EEEEEEEHHHHHHHHHHHHCSC
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCcceEEEEECCCCCHHHHHHHHHHHHHc-CC-ceEEEEcchHHHHHHHhhhccc
Confidence 455555544444333222 223 24667889999887765556666666543 42 46899999999887531 1
Q ss_pred ------CCCCeEEEEECccceeEeEec--CCcE
Q 020972 144 ------GKLHGCVLIAGTGTIAYGFTE--DGRD 168 (319)
Q Consensus 144 ------g~~~~v~v~~GTGigg~gii~--dG~~ 168 (319)
.....+++=+|.|.--..++. +|.+
T Consensus 189 ~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~ 221 (675)
T 3d2f_A 189 LPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQL 221 (675)
T ss_dssp CCCSSSCCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred cccccCCCcEEEEEEcCCCcEEEEEEEecCCeE
Confidence 123466777888865544443 5554
No 105
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=73.48 E-value=6.9 Score=31.62 Aligned_cols=55 Identities=15% Similarity=0.064 Sum_probs=38.7
Q ss_pred EEEEEEcCccceeEEEEeCccCCCCCCCCCCe---EEEEecCCCCccccCHHHHHHHHHHHHHHHHHHcC
Q 020972 23 VILGLDGGTTSTVCICMPVISMSDSLPDPLPV---LARAAAGCSNHNSVGEDAARETIEKVMADALLKSG 89 (319)
Q Consensus 23 ~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~i---l~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~~~ 89 (319)
.+||||-|-++|=+++++. +|+. +......+. . .+..+-+..|.+.+.+++++..
T Consensus 2 ~ILGIDPGl~~tG~gvi~~---------~g~~~~~v~~G~i~t~-~--~~~~~Rl~~i~~~l~~~i~~~~ 59 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQ---------VGRQLSYLGSGCIRTK-V--DDLPSRLKLIYAGVTEIITQFQ 59 (158)
T ss_dssp EEEEEECCSSEEEEEEEEE---------ETTEEEEEEEEEEECC-C--SCHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEccCCCCeeEEEEEe---------cCCeEEEEEeeEEECC-C--CCHHHHHHHHHHHHHHHHHHcC
Confidence 4899999999999999997 6653 333333332 1 3455556778888888888765
No 106
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=68.77 E-value=35 Score=33.47 Aligned_cols=90 Identities=16% Similarity=0.048 Sum_probs=53.0
Q ss_pred CHHHHHHHHHHHHHHHHHH-cCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCC---
Q 020972 69 GEDAARETIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG--- 144 (319)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g--- 144 (319)
+++++...+.+-+.+..+. .+ ..+..+.|++|-.-+......+++..+.. +. ..+.+.|+..||+++-...
T Consensus 111 ~~~ei~a~~L~~l~~~ae~~l~---~~v~~~VitVPa~f~d~qr~a~~~A~~~A-Gl-~v~~li~EP~AAAlay~l~~~~ 185 (605)
T 2kho_A 111 APPQISAEVLKKMKKTAEDYLG---EPVTEAVITVPAYFNDAQRQATKDAGRIA-GL-EVKRIINEPTAAALAYGLDKGT 185 (605)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHC---SCCCEEEEEECTTCCHHHHHHHHHHHHTT-TC-EEEEEEEHHHHHHHHTTTTSSS
T ss_pred cHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEEECCCCCHHHHHHHHHHHHHc-CC-ceEEEecCHHHHHHHhhhcccC
Confidence 4555554444333332222 22 24567789999977665555666665543 42 4689999999988853221
Q ss_pred -CCCeEEEEECccceeEeEe
Q 020972 145 -KLHGCVLIAGTGTIAYGFT 163 (319)
Q Consensus 145 -~~~~v~v~~GTGigg~gii 163 (319)
....+++=+|.|..-..++
T Consensus 186 ~~~~vlV~DlGGGT~Dvsi~ 205 (605)
T 2kho_A 186 GNRTIAVYDLGGGTFDISII 205 (605)
T ss_dssp SEEEEEEEEECSSCEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEE
Confidence 2346677788876544443
No 107
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=61.48 E-value=10 Score=35.78 Aligned_cols=66 Identities=9% Similarity=-0.053 Sum_probs=48.6
Q ss_pred hHHHHHHHHcC------CHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCCCcchhhcccccccEEEEcchhhhcHHHHH
Q 020972 241 VPVVVSCAEAG------DEVANKILQDSVEELALSVKAVVQRLS---LSGEGVTYTKILKEKVPLLMENILFLLSWLVVF 311 (319)
Q Consensus 241 ~~~v~~~A~~G------D~~A~~il~~a~~~Lg~~la~li~~l~---~~~~~~~~~~~~~~~~~ivl~Gg~~~~~~~~~~ 311 (319)
.+.|.+++.+| |+.|+..++-++..+++.|..+...|+ +-| ...-||+.||+-.++. .+.
T Consensus 302 ~R~i~~~~~~g~~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~~~~~~G----------~vDaIVFTGGIGEns~-~iR 370 (438)
T 4h0p_A 302 FGHIIQNLDPSKCSEEDHEKAKLTYAVFLDRLLNFVAQYLFKLLSEVPIE----------SIDGLVFSGGIGEKGA-ELR 370 (438)
T ss_dssp HHHHHHTTSTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGG----------GSCEEEEEHHHHHHCH-HHH
T ss_pred HHHHHHhhhccCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC----------CCCEEEECCccccCcH-HHH
Confidence 46677777765 999999999999999999999988875 101 1247999999984554 556
Q ss_pred HHHhhc
Q 020972 312 LKLIEG 317 (319)
Q Consensus 312 ~~~~~~ 317 (319)
..++++
T Consensus 371 ~~i~~~ 376 (438)
T 4h0p_A 371 RDVLKK 376 (438)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666553
No 108
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=60.55 E-value=77 Score=30.57 Aligned_cols=97 Identities=15% Similarity=0.175 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHH-HcCCCcccc--ceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCC
Q 020972 70 EDAARETIEKVMADALL-KSGSNRSAV--RAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKL 146 (319)
Q Consensus 70 ~~~~~~~i~~~i~~~l~-~~~~~~~~i--~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g~~ 146 (319)
....++.+..+.+.++. +.++++++. ..+-+-.|=..+......+.+.|=+.|+. --+++.+++-+++++. |..
T Consensus 170 ~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~-pa~~~~~~~vla~ya~--G~~ 246 (593)
T 4fo0_A 170 LTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGF-SGIVVHQESVCATYGS--GLS 246 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCC-SEEEEEEHHHHHHHHH--TCS
T ss_pred hhcCHHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCC-CeEEeechHHHHHHHC--CCC
Confidence 45667778888888775 456665543 34667778777666666777777777872 3499999999999875 456
Q ss_pred CeEEEEECccceeEeEecCCcEE
Q 020972 147 HGCVLIAGTGTIAYGFTEDGRDA 169 (319)
Q Consensus 147 ~~v~v~~GTGigg~gii~dG~~~ 169 (319)
++++|=+|.+..-.--|.||..+
T Consensus 247 tglVVDiG~~~T~v~PV~dG~~l 269 (593)
T 4fo0_A 247 STCIVDVGDQKTSVCCVEDGVSH 269 (593)
T ss_dssp EEEEEEECSSCEEEEEEESSCBC
T ss_pred ceEEEEeCCCceeeeeeECCEEe
Confidence 89999999887555556788754
No 109
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=57.40 E-value=87 Score=29.18 Aligned_cols=93 Identities=19% Similarity=0.245 Sum_probs=60.2
Q ss_pred HHHHHHHHHHH-HcCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCC------CCCe
Q 020972 76 TIEKVMADALL-KSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG------KLHG 148 (319)
Q Consensus 76 ~i~~~i~~~l~-~~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g------~~~~ 148 (319)
.+.+.++.++. ..++.+.+ ..+-+..|=...+.....+.+.+=+.|+. ..+++.+++-+++++.... ..++
T Consensus 104 ~~e~iw~~~~~~~L~v~~~~-~pvlltep~~~~~~~re~~~ei~FE~~~~-p~v~l~~~~vla~~a~G~~~~~~~~~~tg 181 (427)
T 3dwl_A 104 HMERFWQQSLFKYLRCEPED-HYFLLTEPPLNPPENRENTAEIMFESFNC-AGLYIAVQAVLALAASWTSSKVTDRSLTG 181 (427)
T ss_dssp HHHHHHHHHHHTTSCCCGGG-CEEEEEECTTCCHHHHHHHHHHHTTTTCC-SEEEEEEHHHHHHHGGGGSTTTCSCCCCE
T ss_pred HHHHHHHHHHhHhhCCCCcC-CcEEEEcCCCCCHHHHHHHHHHHHHhccC-ceeeecchHHHHHHhcCCcccccCCCceE
Confidence 34444444443 23444432 25567777666555566777777666762 3499999999999875421 4679
Q ss_pred EEEEECccceeEeEecCCcEEe
Q 020972 149 CVLIAGTGTIAYGFTEDGRDAR 170 (319)
Q Consensus 149 v~v~~GTGigg~gii~dG~~~r 170 (319)
++|-+|.|.--...+.+|..+.
T Consensus 182 lVVDiG~g~T~v~PV~~G~~l~ 203 (427)
T 3dwl_A 182 TVVDSGDGVTHIIPVAEGYVIG 203 (427)
T ss_dssp EEEEESSSCEEEEEEETTEECG
T ss_pred EEEECCCCceEEEEEECCEEeh
Confidence 9999999986555667887543
No 110
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=54.21 E-value=4.8 Score=37.35 Aligned_cols=69 Identities=20% Similarity=0.323 Sum_probs=17.3
Q ss_pred EEEeecCCCCchhHHHHHHHHHhhCCCCce-EEEeCcHHHHHHhhcCCCCCeEEEEECccceeEeEecCCcEEe
Q 020972 98 VCLAVSGVNHPTDQQRILNWLRDIFPGNVR-LYVHNDALAALASGTMGKLHGCVLIAGTGTIAYGFTEDGRDAR 170 (319)
Q Consensus 98 Igig~pG~~~~~~~~~l~~~L~~~~~~~~p-v~v~NDa~aa~~g~~~g~~~~v~v~~GTGigg~gii~dG~~~r 170 (319)
+-+..|-.........+.+.+-+.|+ .| +++.+++-+++++. |...+++|-+|.|.--...+.+|....
T Consensus 107 vllt~p~~~~~~~r~~~~e~~fe~~~--~~~~~~~~~~~~a~~a~--g~~~~lVVDiG~g~T~v~pv~~G~~~~ 176 (394)
T 1k8k_B 107 ILLTEPPMNPTKNREKIVEVMFETYQ--FSGVYVAIQAVLTLYAQ--GLLTGVVVDSGDGVTHICPVYEGFSLP 176 (394)
T ss_dssp ---------------------------------------------------CCEEEECSSCEEEECEETTEECS
T ss_pred EEEEECCCCCHHHHHHHHHHhhhccC--CCeEEEEhhHHHHHHhC--CCceEEEEEcCCCceEeeeeECCEEcc
Confidence 44555554433333445555545565 44 88999999888864 346789999999885555567887653
No 111
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=54.17 E-value=0.41 Score=43.66 Aligned_cols=13 Identities=0% Similarity=-0.294 Sum_probs=7.6
Q ss_pred EEEEEEcCcccee
Q 020972 23 VILGLDGGTTSTV 35 (319)
Q Consensus 23 ~~lGIDiGGTk~~ 35 (319)
.+.-+|..|+-+.
T Consensus 43 ~~~l~d~~G~il~ 55 (343)
T 2yhw_A 43 RVAIVSMKGEIVK 55 (343)
T ss_dssp EEEEEETTSCEEE
T ss_pred EEEEECCCCcEEE
Confidence 3455688776443
No 112
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=53.24 E-value=1.2e+02 Score=30.22 Aligned_cols=99 Identities=12% Similarity=0.156 Sum_probs=67.7
Q ss_pred CHHHHHHHHHHHHHHHHH--HcCCCccc--cceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCC
Q 020972 69 GEDAARETIEKVMADALL--KSGSNRSA--VRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMG 144 (319)
Q Consensus 69 ~~~~~~~~i~~~i~~~l~--~~~~~~~~--i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g 144 (319)
+.++.++.+..+++.++. +.++.+.+ -..+-+..|=.........+.+.+=+.|+. ..+++.+++-+++++...
T Consensus 191 s~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgv-pavyl~~qavlAlyasGl- 268 (655)
T 4am6_A 191 SLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQF-QAVAIIQESLATCYGAGI- 268 (655)
T ss_dssp SHHHHHHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCC-SEEEEEEHHHHHHHHSCC-
T ss_pred cccccHHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCC-CeeeeccHHHHHHHhCCC-
Confidence 356667777777777775 45555531 234667777666655566777777777872 359999999988886421
Q ss_pred CCCeEEEEECccceeEeEecCCcEE
Q 020972 145 KLHGCVLIAGTGTIAYGFTEDGRDA 169 (319)
Q Consensus 145 ~~~~v~v~~GTGigg~gii~dG~~~ 169 (319)
...+++|-+|.|..-..-+.+|..+
T Consensus 269 ~ttGLVVDiG~g~T~VvPV~eG~vl 293 (655)
T 4am6_A 269 STSTCVVNIGAAETRIACVDEGTVL 293 (655)
T ss_dssp SSCEEEEEECSSCEEEEEEETTEEC
T ss_pred CCceEEEcCCCceEEEEEEeCCEEE
Confidence 3578999999998555556788654
No 113
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=50.69 E-value=1.1e+02 Score=27.61 Aligned_cols=128 Identities=13% Similarity=0.026 Sum_probs=66.6
Q ss_pred cEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEE-----EecCC-CCccccCHHHHHHHHHHHHHHHHHHcCCCcccc
Q 020972 22 EVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR-----AAAGC-SNHNSVGEDAARETIEKVMADALLKSGSNRSAV 95 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~-----~~~~~-~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i 95 (319)
.+++.||+|.+.+|+.+++..... .-.++.+ .+..+ ......+++.+-+. ++++.+.......++
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~~~-----~~~~i~~~~~~~~k~~~gLs~~~~~~~~~~~~----l~~f~~~~~~~~~~v 73 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDTDD-----TNTPIHIEEIWNKKIKPGFASIQPNSVTIDAY----LTMLLADAPIHNIPV 73 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECT-----TSCEEEEEEEEEEEESSCGGGSCCSHHHHHHH----HHHHHTTCSCCSEEE
T ss_pred CEEEEEEcCCCCeEEEEEEEcCCC-----CCceeEeeeeeeeccCCChhhcCCCHHHHHHH----HHHHHHHHhcCCCcE
Confidence 478999999999999999852100 1234443 22221 11111234443333 333333111111223
Q ss_pred ceEEEeecCCCCchh--HHHHHHHHHhhC-------CCCceEEEeCcHHHHHH---hh--cCC----C--CCeEEEEECc
Q 020972 96 RAVCLAVSGVNHPTD--QQRILNWLRDIF-------PGNVRLYVHNDALAALA---SG--TMG----K--LHGCVLIAGT 155 (319)
Q Consensus 96 ~~Igig~pG~~~~~~--~~~l~~~L~~~~-------~~~~pv~v~NDa~aa~~---g~--~~g----~--~~~v~v~~GT 155 (319)
..++.+|+=.... ...+.+.+++.+ + .+|.|-.-..=|.+ +. ..+ . +..+++=+|-
T Consensus 74 --~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g--~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGG 149 (353)
T 3aap_A 74 --YFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQL--VEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGG 149 (353)
T ss_dssp --EEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEE--EEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECS
T ss_pred --EEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCC--CeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCC
Confidence 3467788643333 455666666665 4 67887776653333 21 121 2 2488899999
Q ss_pred cceeEeE
Q 020972 156 GTIAYGF 162 (319)
Q Consensus 156 Gigg~gi 162 (319)
|+-=..+
T Consensus 150 GStei~~ 156 (353)
T 3aap_A 150 ASVQIVF 156 (353)
T ss_dssp SEEEEEE
T ss_pred CceEEEE
Confidence 9854434
No 114
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=50.45 E-value=4.9 Score=35.95 Aligned_cols=32 Identities=16% Similarity=0.038 Sum_probs=9.5
Q ss_pred eEecCCcEEeeCCCCCccCC-cCChHHHHHHHH
Q 020972 161 GFTEDGRDARAAGAGPILGD-WGSGYGIAAQAL 192 (319)
Q Consensus 161 gii~dG~~~raGg~Ghl~gd-~Gsa~~iG~~~~ 192 (319)
|-+..|....+||+||+..+ .|..|.||++.+
T Consensus 152 G~l~~G~~g~aGEiGh~~v~~~g~~C~cG~~Gc 184 (310)
T 3htv_A 152 GAPWTGAHGVAGELGHIPLGDMTQHCACGNPGC 184 (310)
T ss_dssp TEEECCSSSCCCC--------------------
T ss_pred CEEeecCCCCceeCcceEeCCCCCcCCCCCCce
Confidence 34457887789999999764 466678887655
No 115
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=50.11 E-value=1.4e+02 Score=28.56 Aligned_cols=91 Identities=15% Similarity=0.031 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHH-cCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEEEeCcHHHHHHhhcCCCCCeEEEEEC
Q 020972 76 TIEKVMADALLK-SGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLYVHNDALAALASGTMGKLHGCVLIAG 154 (319)
Q Consensus 76 ~i~~~i~~~l~~-~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~v~NDa~aa~~g~~~g~~~~v~v~~G 154 (319)
.+..+++.++.+ .++.+.+-..|-+..|=.........+.+.+=+.|+. ..+++.+.+.+++++.. ..++++|-+|
T Consensus 94 ~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~v-pav~l~~~~vlalya~G--~~tglVVDiG 170 (498)
T 3qb0_A 94 TAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQF-EACYLAPTSTCVSFAAG--RPNCLVVDIG 170 (498)
T ss_dssp HHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCC-SEEEEEEHHHHHHHHHT--CSSEEEEEEC
T ss_pred HHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCC-CeEeecchHHHHHHHcC--CCeEEEEEcC
Confidence 344445555533 4444332213556666655555556677777666762 35999999999988753 4579999999
Q ss_pred ccceeEeEecCCcEE
Q 020972 155 TGTIAYGFTEDGRDA 169 (319)
Q Consensus 155 TGigg~gii~dG~~~ 169 (319)
.|.--...+.+|..+
T Consensus 171 ~g~T~vvPI~~G~~l 185 (498)
T 3qb0_A 171 HDTCSVSPIVDGMTL 185 (498)
T ss_dssp SSCEEEEEEETTEEC
T ss_pred CCcEEEEEEeCCEEc
Confidence 997655566788654
No 116
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=37.52 E-value=56 Score=25.85 Aligned_cols=36 Identities=14% Similarity=0.246 Sum_probs=32.1
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCccccceEEEeec
Q 020972 68 VGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVS 103 (319)
Q Consensus 68 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~p 103 (319)
.+.+++.+...+++++++++.++.+++|..|-+.+.
T Consensus 44 Nt~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTvT 79 (148)
T 1xho_A 44 NTADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVT 79 (148)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 478999999999999999999999999999888754
No 117
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=36.25 E-value=1.2e+02 Score=27.02 Aligned_cols=20 Identities=35% Similarity=0.321 Sum_probs=17.4
Q ss_pred cEEEEEEcCccceeEEEEeC
Q 020972 22 EVILGLDGGTTSTVCICMPV 41 (319)
Q Consensus 22 ~~~lGIDiGGTk~~~~l~d~ 41 (319)
..++-+|+||..+.+.++..
T Consensus 191 ~~~~vvDiGggttdi~i~~~ 210 (377)
T 2ych_A 191 RVFLVLDIGAESTSLVLLRG 210 (377)
T ss_dssp CEEEEEEECSSCEEEEEEET
T ss_pred CeEEEEEECCCcEEEEEEEC
Confidence 46889999999999999874
No 118
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=34.83 E-value=64 Score=24.91 Aligned_cols=36 Identities=8% Similarity=0.164 Sum_probs=32.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCccccceEEEeec
Q 020972 68 VGEDAARETIEKVMADALLKSGSNRSAVRAVCLAVS 103 (319)
Q Consensus 68 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~p 103 (319)
.+.+++.+...+++++++++.++.+++|.+|-+.+.
T Consensus 15 Nt~e~I~~at~eLl~~i~~~N~l~~~dIvSv~FT~T 50 (127)
T 1dbf_A 15 DTEEEILQKTKQLLEKIIEENHTKPEDVVQMLLSAT 50 (127)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeC
Confidence 468999999999999999999999999999988764
No 119
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=33.99 E-value=8.9 Score=33.47 Aligned_cols=6 Identities=17% Similarity=0.346 Sum_probs=2.3
Q ss_pred eeCCCC
Q 020972 170 RAAGAG 175 (319)
Q Consensus 170 raGg~G 175 (319)
.+|..|
T Consensus 167 ~cG~~g 172 (289)
T 2aa4_A 167 GCGRTG 172 (289)
T ss_dssp TTSCBS
T ss_pred CCCCch
Confidence 333333
No 120
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=33.69 E-value=1.8e+02 Score=27.11 Aligned_cols=21 Identities=24% Similarity=0.302 Sum_probs=19.0
Q ss_pred CcEEEEEEcCccceeEEEEeC
Q 020972 21 REVILGLDGGTTSTVCICMPV 41 (319)
Q Consensus 21 ~~~~lGIDiGGTk~~~~l~d~ 41 (319)
.+.+|.|..|.|++|+.|+|.
T Consensus 17 ~~~ILviN~GSSS~K~~lf~~ 37 (415)
T 2e1z_A 17 FPVVLVINCGSSSIKFSVLDV 37 (415)
T ss_dssp CCEEEEEEECSSEEEEEEEET
T ss_pred CCeEEEEECCchhheEEEEEC
Confidence 357999999999999999996
No 121
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=31.32 E-value=79 Score=29.87 Aligned_cols=142 Identities=12% Similarity=0.079 Sum_probs=69.2
Q ss_pred ccCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEE---Eec--CCCCccccCHHHHHHHHHHHHHHHHHH----
Q 020972 17 ESGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR---AAA--GCSNHNSVGEDAARETIEKVMADALLK---- 87 (319)
Q Consensus 17 ~~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~---~~~--~~~~~~~~~~~~~~~~i~~~i~~~l~~---- 87 (319)
.++...|.+.||+|.+.+|+.+++..... .. .-.++.+ .+. +........++.+.+.+..+++.+.+.
T Consensus 29 ~~~~~~y~~vID~GSns~Rl~Vy~~~~~~--~~-~~~~~~~~~~~~~~~~Gls~~~~~pe~~~~~l~~Ll~~a~~~iP~~ 105 (456)
T 3cj1_A 29 EPPALKYGIVLDAGSSHTSMFVYKWPADK--EN-DTGIVGQHSSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRD 105 (456)
T ss_dssp --CCEEEEEEEEECSSCEEEEEEEEETTS--TT-STTCCEEEEEEECSSSCGGGGTTSTHHHHHHTHHHHHHHHHHSCHH
T ss_pred CCCCceEEEEEEcCCCCeEEEEEEEcCCC--CC-CccceeeeeeeeecccccccccCCHHHHHHHHHHHHHHHHHhCCHH
Confidence 34455699999999999999999852100 00 0012221 122 211111134566666666666655432
Q ss_pred -cCCCccccceEEEeecCCCCc-----hhHHHHHHHHHhhCC---C-CceEEEeCcHHHH---HHhh--cCC--------
Q 020972 88 -SGSNRSAVRAVCLAVSGVNHP-----TDQQRILNWLRDIFP---G-NVRLYVHNDALAA---LASG--TMG-------- 144 (319)
Q Consensus 88 -~~~~~~~i~~Igig~pG~~~~-----~~~~~l~~~L~~~~~---~-~~pv~v~NDa~aa---~~g~--~~g-------- 144 (319)
.+. .+| ..++.+|+=+. .....+.+.+++.++ . ...+.|-.-..=| +++. ..+
T Consensus 106 ~~~~--t~v--~~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~ 181 (456)
T 3cj1_A 106 RHAS--TPL--YLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWV 181 (456)
T ss_dssp HHTT--CEE--EEEECHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTSCCEET
T ss_pred HcCC--ceE--EEEeeHHHhhCccccHHHHHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhccccccccc
Confidence 222 123 34677776222 123445555555442 0 0256666655423 3221 112
Q ss_pred -------CCCeEEEEECccceeEeEecC
Q 020972 145 -------KLHGCVLIAGTGTIAYGFTED 165 (319)
Q Consensus 145 -------~~~~v~v~~GTGigg~gii~d 165 (319)
.+...++=+|-||-=..+..+
T Consensus 182 ~~~~~~~~~t~gvlDlGGgStqi~~~~~ 209 (456)
T 3cj1_A 182 GRWIRPRKGTLGAMDLGGASTQITFETT 209 (456)
T ss_dssp TEECSSCCCCCEEEEECSSEEEEEEECC
T ss_pred ccccccCCCceEEEEcCCCceEEEeccC
Confidence 234677888888844434333
No 122
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=31.31 E-value=22 Score=34.42 Aligned_cols=22 Identities=23% Similarity=0.213 Sum_probs=0.0
Q ss_pred cCCCcEEEEEEcCccceeEEEEe
Q 020972 18 SGGREVILGLDGGTTSTVCICMP 40 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d 40 (319)
++|+ +++|||+|.|++.+++++
T Consensus 1 M~m~-~~iGIDlGTt~s~va~~~ 22 (554)
T 1yuw_A 1 MSKG-PAVGIDLGTTYSCVGVFQ 22 (554)
T ss_dssp CCSC-CCEEEEECSSEEEEEEEC
T ss_pred CCCC-CEEEEEeCcccEEEEEEE
No 123
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=30.80 E-value=80 Score=24.18 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=31.8
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCc-cccceEEEeec
Q 020972 68 VGEDAARETIEKVMADALLKSGSNR-SAVRAVCLAVS 103 (319)
Q Consensus 68 ~~~~~~~~~i~~~i~~~l~~~~~~~-~~i~~Igig~p 103 (319)
.+.+++.+...+++++++++.++.+ ++|.+|-+.+.
T Consensus 14 n~~e~I~~at~eLl~~i~~~N~l~~~~divSv~FT~T 50 (122)
T 1ufy_A 14 DTPEAIHQATRELLLKMLEANGIQSYEELAAVIFTVT 50 (122)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTCCCGGGEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCChHhEEEEEEEeC
Confidence 4689999999999999999999998 99999888754
No 124
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=26.99 E-value=41 Score=29.74 Aligned_cols=84 Identities=14% Similarity=-0.010 Sum_probs=44.3
Q ss_pred HHHHcCCCccccceEEEeecCC--CCc---hhHHHHHHHHHhhCCC----------CceEEEeCcHHHHHHhhc---CCC
Q 020972 84 ALLKSGSNRSAVRAVCLAVSGV--NHP---TDQQRILNWLRDIFPG----------NVRLYVHNDALAALASGT---MGK 145 (319)
Q Consensus 84 ~l~~~~~~~~~i~~Igig~pG~--~~~---~~~~~l~~~L~~~~~~----------~~pv~v~NDa~aa~~g~~---~g~ 145 (319)
.+.+++....++ .+.+|+|=- .+. .+...+++.++..+.. -..|.+-+...+|+++.. ...
T Consensus 85 aL~~~~~~~~~~-~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~~~~~~~ 163 (320)
T 2zgy_A 85 ALLTSGLPVSEV-DIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQELDEL 163 (320)
T ss_dssp HHHHHSCCSCEE-EEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHHHHSCTT
T ss_pred HHHHcCCCCceE-EEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhhccccCC
Confidence 333444433344 478898843 221 1223455554332210 024666666666666422 123
Q ss_pred CCeEEEEECccceeEeEecCCcE
Q 020972 146 LHGCVLIAGTGTIAYGFTEDGRD 168 (319)
Q Consensus 146 ~~~v~v~~GTGigg~gii~dG~~ 168 (319)
...+++=+|.|..-..++.+|..
T Consensus 164 ~~~~vvDiGggttd~~v~~~g~~ 186 (320)
T 2zgy_A 164 DSLLIIDLGGTTLDISQVMGKLS 186 (320)
T ss_dssp CEEEEEEECSSCEEEEEEEGGGC
T ss_pred CCEEEEEcCCCeEEEEEEeCCee
Confidence 45677888888866667667653
No 125
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=26.60 E-value=1.6e+02 Score=29.78 Aligned_cols=75 Identities=11% Similarity=-0.085 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEE--EeCcHHH-HHHhhcCCCCC
Q 020972 71 DAARETIEKVMADALLKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLY--VHNDALA-ALASGTMGKLH 147 (319)
Q Consensus 71 ~~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~--v~NDa~a-a~~g~~~g~~~ 147 (319)
.+..+...+.++.+.+-.++.++.|. +=-=|++. ...+.+..+ .|+. =.+-|++ +++++..=...
T Consensus 433 ~~~~~~~~~~~~~~~~l~~~~p~~i~--~D~HP~y~--------st~~a~~~~--~p~~~VQHHhAH~as~mae~~~~~~ 500 (761)
T 3vth_A 433 EKAFNYYIEQIERYKKLFRVDPEVVA--HDMHKGYL--------STQYAKSLD--LPKIEVQHHHAHIASCMAEHNLDEK 500 (761)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSEEE--EESCTTSH--------HHHHHHHSS--SCEEEECHHHHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEE--EeCCCCch--------HHHHHHhcC--CCeEEecHHHHHHHHHHHhcCCCCc
Confidence 34566777778877777776653221 11112221 112323344 5543 3445564 34555321235
Q ss_pred eEEEEE-Cccc
Q 020972 148 GCVLIA-GTGT 157 (319)
Q Consensus 148 ~v~v~~-GTGi 157 (319)
.+.+++ |||-
T Consensus 501 vlg~a~DGtGy 511 (761)
T 3vth_A 501 VIGIAYDGTGY 511 (761)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEEEEeCCCc
Confidence 666666 7775
No 126
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=26.29 E-value=4.5 Score=36.43 Aligned_cols=20 Identities=25% Similarity=0.214 Sum_probs=15.3
Q ss_pred eEecCCcEEeeCCCCCccCC
Q 020972 161 GFTEDGRDARAAGAGPILGD 180 (319)
Q Consensus 161 gii~dG~~~raGg~Ghl~gd 180 (319)
|-+..|....+||+||+..+
T Consensus 166 G~l~~G~~g~aGEiGh~~v~ 185 (327)
T 4db3_A 166 GKVFSGRNNVAGELGHMRLP 185 (327)
T ss_dssp TEECCCTTSCTTCGGGSBCC
T ss_pred CEEeecCCCcCcccccEEec
Confidence 34457877889999999765
No 127
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=25.86 E-value=39 Score=30.98 Aligned_cols=18 Identities=22% Similarity=0.268 Sum_probs=16.0
Q ss_pred EEEEEcCccceeEEEEeC
Q 020972 24 ILGLDGGTTSTVCICMPV 41 (319)
Q Consensus 24 ~lGIDiGGTk~~~~l~d~ 41 (319)
.+|||+|||-+|++-+..
T Consensus 5 ~~~iDiGGtL~Klvy~~~ 22 (360)
T 2i7n_A 5 WFGMDIGGTLVKLVYFEP 22 (360)
T ss_dssp EEEEEECSSEEEEEEEEE
T ss_pred EEEEEeCCceEEEEEEee
Confidence 799999999999888765
No 128
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=25.59 E-value=3.8e+02 Score=24.31 Aligned_cols=37 Identities=5% Similarity=0.101 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcchhhcccccccEEEEcchh
Q 020972 253 EVANKILQDSVEELALSVKAVVQRLSLSGEGVTYTKILKEKVPLLMENILF 303 (319)
Q Consensus 253 ~~A~~il~~a~~~Lg~~la~li~~l~~~~~~~~~~~~~~~~~~ivl~Gg~~ 303 (319)
..|..+++-.++.++..........+. .+||+.||.+
T Consensus 280 DIa~gll~sVa~~I~~lA~l~A~~~~i--------------~~IvftGgfl 316 (360)
T 2i7n_A 280 DLARATLVTITNNIGSIARMCALNENI--------------DRVVFVGNFL 316 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC--------------CCEEEESGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC--------------CeEEEeCccc
Confidence 346666666666666555544566665 3699999944
No 129
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=24.82 E-value=38 Score=30.33 Aligned_cols=73 Identities=7% Similarity=0.054 Sum_probs=39.7
Q ss_pred ceEEEeecCCCCc--hhHHHHHHHHHhh------CCCCc-------eEEEeCcHHHHHHhhc--CCCCCeEEEEECccce
Q 020972 96 RAVCLAVSGVNHP--TDQQRILNWLRDI------FPGNV-------RLYVHNDALAALASGT--MGKLHGCVLIAGTGTI 158 (319)
Q Consensus 96 ~~Igig~pG~~~~--~~~~~l~~~L~~~------~~~~~-------pv~v~NDa~aa~~g~~--~g~~~~v~v~~GTGig 158 (319)
.-+.+|+|=.... +....+++.|+.. +++ . .|.|.--+..+++... ......+++=+|.|..
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g-~~~~i~I~~v~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTt 184 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDD-KEYSFEITDITIKAEGSGVLFLEQENFKNKNVAVIDFGGLNM 184 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTC-CCEEEEEEEEEEEEHHHHHHHHSCCCCTTCEEEEEEECSSCE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECC-EEEEEEEeEEEEEeccHHHHhhcchhhccCCEEEEEeCCCcE
Confidence 3677888875432 2234677777642 111 1 1333333333443211 1224567788898886
Q ss_pred eEeEecCCcEE
Q 020972 159 AYGFTEDGRDA 169 (319)
Q Consensus 159 g~gii~dG~~~ 169 (319)
-..++.+|.+.
T Consensus 185 d~~v~~~g~~~ 195 (329)
T 4apw_A 185 GFSLYRNCVVN 195 (329)
T ss_dssp EEEEEETTEEC
T ss_pred EEEEEECCEEe
Confidence 67777777764
No 130
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=24.18 E-value=1.3e+02 Score=29.98 Aligned_cols=75 Identities=15% Similarity=-0.047 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCccccceEEEeecCCCCchhHHHHHHHHHhhCCCCceEE-E-eCcHHH-HHHhhcC---CC
Q 020972 72 AARETIEKVMADALLKSGSNRSAVRAVCLAVSGVNHPTDQQRILNWLRDIFPGNVRLY-V-HNDALA-ALASGTM---GK 145 (319)
Q Consensus 72 ~~~~~i~~~i~~~l~~~~~~~~~i~~Igig~pG~~~~~~~~~l~~~L~~~~~~~~pv~-v-~NDa~a-a~~g~~~---g~ 145 (319)
+..+...+.++.+.+-.++.++.|. .=-=|++.+ ..+.+.++ .|+. | .+-|++ +.++|.. ..
T Consensus 337 ~~~~~~~~~~~~~~~l~~~~p~~i~--~D~HP~y~s--------t~~a~~~~--~~~~~vQHHhAH~~a~~ae~~~~~~~ 404 (657)
T 3ttc_A 337 GIQTQWREALRLMQNIYNFTPQYVV--HDAHPGYVS--------CQWASEMN--LPTQTVLHHHAHAAACLAEHQWPLDG 404 (657)
T ss_dssp THHHHHHHHHHHHHHHTTCCCSEEE--EESCTTCHH--------HHHHTTSC--SCEEEECHHHHHHHHHHHHTTCCTTC
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEE--EcCCCCchH--------HHHHHHcC--CCeEEeeHHHHHHHHHHHhcCCccCC
Confidence 3455667777777766666553221 111122211 12333444 5643 2 445564 4556631 12
Q ss_pred CCeEEEEE-Cccce
Q 020972 146 LHGCVLIA-GTGTI 158 (319)
Q Consensus 146 ~~~v~v~~-GTGig 158 (319)
...+.++. |||-|
T Consensus 405 ~~vlg~~~DG~G~G 418 (657)
T 3ttc_A 405 GDVIALTLDGIGMG 418 (657)
T ss_dssp CCEEEEEEEEEEEC
T ss_pred CCEEEEEEeCCccC
Confidence 45666665 77753
No 131
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=24.11 E-value=9.4 Score=35.29 Aligned_cols=13 Identities=15% Similarity=0.304 Sum_probs=6.8
Q ss_pred CCcEEeeCCCCCc
Q 020972 165 DGRDARAAGAGPI 177 (319)
Q Consensus 165 dG~~~raGg~Ghl 177 (319)
+|....+|..|++
T Consensus 253 ~g~~c~cG~~gcl 265 (406)
T 1z6r_A 253 YGKRCYCGNHGCL 265 (406)
T ss_dssp TSCBCTTSCBSBT
T ss_pred CCCCCCCCCccch
Confidence 4555555555543
No 132
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=22.42 E-value=2.3e+02 Score=26.64 Aligned_cols=142 Identities=12% Similarity=0.022 Sum_probs=68.1
Q ss_pred cCCCcEEEEEEcCccceeEEEEeCccCCCCCCCCCCeEEE---Eec--CC-CCccccCHHHHHHHHHHHHHHHHHHcCCC
Q 020972 18 SGGREVILGLDGGTTSTVCICMPVISMSDSLPDPLPVLAR---AAA--GC-SNHNSVGEDAARETIEKVMADALLKSGSN 91 (319)
Q Consensus 18 ~~m~~~~lGIDiGGTk~~~~l~d~~~~~~~~~~~G~il~~---~~~--~~-~~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 91 (319)
+|...|.+.||+|.|.+|+.++...... ....+ ++.+ .+. +. +... .+++.+.+.|..+++.+.+.....
T Consensus 30 ~~~~~y~iviDaGSsgtRl~VY~~~~~~--~~~~~-~~~~~~~~k~~gpGlSs~~-~~p~~~~~~l~~Ll~~a~~~vp~~ 105 (452)
T 3zx3_A 30 PENVKYGIVLDAGSSHTNLYIYKWPAEK--ENDTG-VVQQLEECQVKGPGISKYA-QKTDEIAAYLAECMKMSTERIPAS 105 (452)
T ss_dssp --CEEEEEEEEECSSCEEEEEEEEECCC--TTCCC-CCEEEEEEECSSSCGGGGT-TCGGGHHHHHHHHHHHHHHHSCHH
T ss_pred CCCceEEEEEEcCCCCcEEEEEEEeCCc--CCCcc-ccceeeeecccCCChhccC-CCHHHHHHHHHHHHHHHHHhCCHH
Confidence 4556799999999999999998762100 00011 2221 222 22 1122 356666666777666655432111
Q ss_pred ccccce-EEEeecCCCC-----chhHHHHHHHHHhhC---CC-CceEEEeCcHHHHHH---hh--cCC------CCCeEE
Q 020972 92 RSAVRA-VCLAVSGVNH-----PTDQQRILNWLRDIF---PG-NVRLYVHNDALAALA---SG--TMG------KLHGCV 150 (319)
Q Consensus 92 ~~~i~~-Igig~pG~~~-----~~~~~~l~~~L~~~~---~~-~~pv~v~NDa~aa~~---g~--~~g------~~~~v~ 150 (319)
.....- ..++.+|+-. ++....+.+.+++.+ +. -..+.|.....=+.+ +. ..| .+...+
T Consensus 106 ~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~ 185 (452)
T 3zx3_A 106 KQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGA 185 (452)
T ss_dssp HHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEE
T ss_pred HcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHHHhhhccccCCCCCceEE
Confidence 011122 2356777622 112233433444433 20 025777666653333 21 122 245667
Q ss_pred EEECccceeEeEe
Q 020972 151 LIAGTGTIAYGFT 163 (319)
Q Consensus 151 v~~GTGigg~gii 163 (319)
+=+|-|+-=..+.
T Consensus 186 lDlGGgStQi~f~ 198 (452)
T 3zx3_A 186 LDLGGASTQITFV 198 (452)
T ss_dssp EEECSSEEEEEEC
T ss_pred EecCCCceEEEec
Confidence 7888887433333
No 133
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=20.87 E-value=10 Score=34.85 Aligned_cols=32 Identities=19% Similarity=0.079 Sum_probs=22.2
Q ss_pred eEecCCcEEeeCCCCCccCCcCChHHHHHHHH
Q 020972 161 GFTEDGRDARAAGAGPILGDWGSGYGIAAQAL 192 (319)
Q Consensus 161 gii~dG~~~raGg~Ghl~gd~Gsa~~iG~~~~ 192 (319)
|-+..|....+|+|||+..+.+..+.||...+
T Consensus 232 G~l~~G~~g~aGEiGh~~v~~~~~c~cG~~gc 263 (380)
T 2hoe_A 232 GELYRGENGYAGEIGYTRVFNGNEYVFLEDVC 263 (380)
T ss_dssp TEECCCSSSCCCCGGGCEEECSSSEEEHHHHH
T ss_pred CEEeccCCCccccccceEecCCCCCCCCCccH
Confidence 34457777889999999876554455665544
Done!