BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020973
MNVMGEESSERRKAMKGLLFLAKKKGNFLSSDLEGQEKDERRVRTGTQREDAGEIDNIVE
RVENIVERVQCTTIHKSESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIK
EQLNRFNTHYNHSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRS
PSSISSSSKSESSDAERLLSQVMHEIRIEEAIIDEEMAEIQATCVLHLPFASLNKKRLYG
SALGFIQKEFKKIERVIIKAQQLRLKALELVVKKVLSPTDAAKFFVAFERIQNAIHQVSE
QQKLGKVLDTVPTKAFKTS

High Scoring Gene Products

Symbol, full name Information P value
AT1G15320 protein from Arabidopsis thaliana 2.1e-45
AT4G18690 protein from Arabidopsis thaliana 0.00050

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020973
        (319 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2037813 - symbol:AT1G15320 "AT1G15320" species...   477  2.1e-45   1
TAIR|locus:2124157 - symbol:AT4G18690 "AT4G18690" species...    95  0.00050   2


>TAIR|locus:2037813 [details] [associations]
            symbol:AT1G15320 "AT1G15320" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 InterPro:IPR025422 Pfam:PF14144
            EMBL:DQ446252 IPI:IPI00521810 RefSeq:NP_172984.1 UniGene:At.70433
            EnsemblPlants:AT1G15320.1 GeneID:838101 KEGG:ath:AT1G15320
            TAIR:At1g15320 InParanoid:Q1PFW1 OMA:LWRQEQN PhylomeDB:Q1PFW1
            ProtClustDB:CLSN2679464 Genevestigator:Q1PFW1 Uniprot:Q1PFW1
        Length = 307

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 99/239 (41%), Positives = 141/239 (58%)

Query:    75 HKSESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSRWELEELIKEQLNRFNTHYNHSS 134
             H+ ES  +G+++S + Y  WRQEQ + A  L+K+L SRWEL+ELI+EQL+R+ +HY++S 
Sbjct:    65 HQHESFTKGDELSGDLYELWRQEQNSIAARLDKELKSRWELDELIEEQLSRYQSHYDNSM 124

Query:   135 IPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAILDLARGLVRXXXXXXXXXXXXXXD 194
             + T+LKDV++ ++P W PPHELAA+ W+GDWRP++ILDL R L                 
Sbjct:   125 VSTFLKDVSNLVLPTWIPPHELAAVAWLGDWRPTSILDLVRILAAQNPSFSLSESSL--- 181

Query:   195 AERLLSQVMHXXXXXXXXXXXXXXXXXXTCVLHLPFASLNKKRLYGSALGFIQKEFKKIE 254
               R+LSQ++                   T VL+LPF+ L   RL+  AL  +Q+ F  I 
Sbjct:   182 --RVLSQLLREIRIEEAVIDEEYAEIQATGVLYLPFSPLCNTRLHEEALRSVQELFGNIH 239

Query:   255 RVIIKAQQXXXXXXXXXXXXXXSPTDAAKFFVAFERIQNAIHQVSEQQKLGKVLDTVPT 313
             +VI KAQ+              + TD A+F VAF  IQ+AIHQ  EQ+KL K+   VP+
Sbjct:   240 KVISKAQRLRYKVLELVMKKLLNQTDTAEFVVAFAGIQDAIHQFGEQKKLRKIYPAVPS 298


>TAIR|locus:2124157 [details] [associations]
            symbol:AT4G18690 "AT4G18690" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 InterPro:IPR025422 Pfam:PF14144
            ProtClustDB:CLSN2685446 EMBL:AY954859 EMBL:DQ132707 IPI:IPI00516853
            RefSeq:NP_193604.2 UniGene:At.54398 ProteinModelPortal:Q58FV0
            DNASU:827603 EnsemblPlants:AT4G18690.1 GeneID:827603
            KEGG:ath:AT4G18690 eggNOG:NOG242838 OMA:HISLHEW
            Genevestigator:Q58FV0 Uniprot:Q58FV0
        Length = 282

 Score = 95 (38.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
 Identities = 29/100 (29%), Positives = 43/100 (43%)

Query:    77 SESSKRGEDISREKYSHWRQEQKTRAVSLEKQLNSR-----WELEELIKEQLNRFNTHYN 131
             S SS   E + +  Y  W   Q    V L++ L S       +LEEL+ + +N F   Y 
Sbjct:     4 SSSSYGIEQLQKGCYYEWMSVQAKHIVDLKEALMSHRSKEDHKLEELVGKIVNDFQK-YT 62

Query:   132 HSSIPTYLKDVASFLMPRWTPPHELAALYWIGDWRPSAIL 171
                     +  +S+  P W  P E   L W+G  RPS+ +
Sbjct:    63 EKRSELSRRSCSSYFAPSWNSPLE-NGLLWMGGCRPSSFI 101

 Score = 54 (24.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
 Identities = 12/34 (35%), Positives = 22/34 (64%)

Query:   277 SPTDAAKFFVAFERIQNAIHQ---VSEQQKLGKV 307
             +P  AA+F +A +R+  ++H+   V E+Q+ G V
Sbjct:   226 TPVQAAEFLLAGKRLHISLHEWGRVREEQRFGCV 259


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.131   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      319       257   0.00086  114 3  11 22  0.47    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  187 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.68u 0.09s 21.77t   Elapsed:  00:00:01
  Total cpu time:  21.68u 0.09s 21.77t   Elapsed:  00:00:01
  Start:  Mon May 20 17:20:15 2013   End:  Mon May 20 17:20:16 2013

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