BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020974
(319 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297735532|emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 174/298 (58%), Gaps = 25/298 (8%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDV 86
E RC+DAL Q+K+ +TY+ L STQV + L + KHP KIQ LA DL+ W+ + D
Sbjct: 30 EVGRCVDALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKVVIDE 89
Query: 87 E--------DVEYVAVTKKAKLVENVKVEEVTNGEERRH--------DSGNVPKKSISCM 130
D A +KA VE V+ + V N +ER+ + N P K ++ M
Sbjct: 90 TRNKKNGGLDNNGSAKAEKASKVETVE-KRVENVDERKQFSSVKKPPQASNGPPK-LTAM 147
Query: 131 IKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNG 190
IKCND+ R+ VRE L +AL KV+ EA + + D V ACDPI+VA+ VES M+EK RSNG
Sbjct: 148 IKCNDALRDKVRELLAEALFKVASEADEDIK-DEVNACDPIRVAVSVESVMFEKMGRSNG 206
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGA 250
KFKYR ++FNI DP N D RRKVLLG VKP+ +INMS +EMAS++ Q N + +
Sbjct: 207 TQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRENSQIKEKAL 266
Query: 251 LVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
P + +D ++CGRCG K + YQ + D +T VTC+NCN +W
Sbjct: 267 FDCERGGPPKAT-----TDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHW 319
>gi|225439709|ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 178/342 (52%), Gaps = 68/342 (19%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWD- 85
E RC+DAL Q+K+ +TY+ L STQV + L + KHP KIQ LA DL+ W+ + D
Sbjct: 30 EVGRCVDALKQLKSFPVTYEALASTQVGKRLRHLTKHPKGKIQSLASDLLEMWKKVVIDE 89
Query: 86 ------------------VEDVEYVAV----------TKKAKLVENVKVEE--------- 108
V E V V +KA VE VK+E+
Sbjct: 90 TRNKKNGGLDNNGSAKAEVSKTETVKVEMAHKAGGVKVEKASKVETVKIEKFDRGSSTKP 149
Query: 109 --------------VTNGEERRH--------DSGNVPKKSISCMIKCNDSFREIVREKLY 146
V N +ER+ + N P K ++ MIKCND+ R+ VRE L
Sbjct: 150 GSVSRSETIKVEKRVENVDERKQFSSVKKPPQASNGPPK-LTAMIKCNDALRDKVRELLA 208
Query: 147 DALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDP 206
+AL KV+ EA + + D V ACDPI+VA+ VES M+EK RSNG KFKYR ++FNI DP
Sbjct: 209 EALFKVASEADEDIK-DEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDP 267
Query: 207 ENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKII 266
N D RRKVLLG VKP+ +INMS +EMAS++ Q N + + P +
Sbjct: 268 NNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRENSQIKEKALFDCERGGPPKAT---- 323
Query: 267 VSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+D ++CGRCG K + YQ + D +T VTC+NCN +W
Sbjct: 324 -TDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHW 364
>gi|224139382|ref|XP_002323085.1| predicted protein [Populus trichocarpa]
gi|222867715|gb|EEF04846.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 200/339 (58%), Gaps = 40/339 (11%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKE---GVVEEARCIDALDQIKNSSITYQLLVSTQVIRHL 57
MEK++++L + AK+AA A++ + E +RC+D+L Q++ +T ++LVSTQV + L
Sbjct: 1 MEKELVELFDKAKKAADASLNDDKSSSGPEVSRCVDSLKQLRKFKVTSEILVSTQVGKKL 60
Query: 58 LPMLKHPSQKIQKLAYDLISSWRDMCWD-----------VEDVEYVAVTKKAKLVENVKV 106
P+ KHP KI+ +A DL+ +W+ + D VE ++ ++ K E VKV
Sbjct: 61 RPLAKHPKDKIRAVASDLLETWKKIVIDETMRKKNATVKVEKLQKTSMVK-VSTSETVKV 119
Query: 107 EEV----------TNGEERRHDSGNVPKKS------ISCMIKCNDSFREIVREKLYDALS 150
E++ T EE + S P ++ + ++KCND+ R+ +RE L +ALS
Sbjct: 120 EKMDQDKTVKVAQTCKEEIQTSSVKKPSQAPTGPPKLKTLVKCNDALRDKIRELLAEALS 179
Query: 151 KVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQD 210
KV+ EA + + D V+ACDPI+VA+ VESAM+EK RSNG K KYR ++FNI D N D
Sbjct: 180 KVASEADEDIR-DEVEACDPIRVAVSVESAMFEKLGRSNGAQKMKYRSIMFNIKDQNNPD 238
Query: 211 FRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKI-IVSD 269
RRKVLLG V+P+ ++ M +EMAS++ + N+ + K+ AL F K +D
Sbjct: 239 LRRKVLLGQVQPQRLVTMPPEEMASEQRKRENNQI-KEKAL-----FDCERGGKAEATTD 292
Query: 270 IYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
++CGRCG K + YQ + D +T +VTC+NCN +W
Sbjct: 293 QFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNNHW 331
>gi|255559741|ref|XP_002520890.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223540021|gb|EEF41599.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 330
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 192/331 (58%), Gaps = 36/331 (10%)
Query: 2 EKKVMDLCEAAKRAAVAAVWKE-GVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPM 60
EK++++L E AK+AA A +E G EE+RC+DAL Q+K +T QLLVSTQV + L P+
Sbjct: 8 EKELVELFEVAKKAAGATELEEKGGAEESRCLDALAQLKAFPVTAQLLVSTQVGKLLRPL 67
Query: 61 LKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKK---------AKLVENVKVEEV-T 110
KH + IQ LA D+ W+ +E + TKK K EN+K+E+ T
Sbjct: 68 TKHSRKNIQDLASDVFPLWKKKF-----LEQTSSTKKNGMLEDKTSVKSTENIKIEKTRT 122
Query: 111 NGEERRHDSGNVPKKS----ISCMI---------KCNDSFREIVREKLYDALSKVSDEAA 157
E + + P+ + C++ KCND R+ +RE+LY+AL KVS EA
Sbjct: 123 IKVEAKTEHKGEPRSAKVVESECLLRSPRMKSIPKCNDPSRDNIREQLYEALCKVSSEAN 182
Query: 158 DKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLL 217
+++ + V ACD I VA+ VESA++ W SNG + KYR L+FN D +N DFRRKVLL
Sbjct: 183 EEIQKE-VNACDAIGVAVAVESALFSNWGPSNGSDRIKYRSLIFNTRDAKNPDFRRKVLL 241
Query: 218 GHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCG 277
G VKPE I +S++EMASD+ + N + K+ AL+ + G + +D ++CGRCG
Sbjct: 242 GQVKPERIAELSSEEMASDERRKKNKEI-KEKALLVCQL--AGAPK--ATTDQFKCGRCG 296
Query: 278 HNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
K S YQ + D +T +VTC+NC+ W
Sbjct: 297 QRKTSYYQMQTRSADEPMTTYVTCVNCSNRW 327
>gi|116789178|gb|ABK25146.1| unknown [Picea sitchensis]
Length = 331
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 178/303 (58%), Gaps = 28/303 (9%)
Query: 26 VEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWR----- 80
EE RC+DAL +++ +T +LVSTQV + L + KHP +KI+ LA +L+ +W+
Sbjct: 33 AEEQRCLDALKALRSVPVTMGILVSTQVGKRLRNVTKHPREKIRTLAAELLDAWKKVVTS 92
Query: 81 -------DMCWDVEDVEY--VAVTKKAKLVENVKVEEVTN------GEERRHDSGNVPKK 125
+ VED ++ V V A E+VKVE+ G ++ S N P K
Sbjct: 93 ETLPDNGNKATKVEDKQFKSVKVEVNASKGESVKVEKKPKVETESIGSKKASSSSNGPPK 152
Query: 126 SISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW 185
++ MIKCND+ R+ RE LY+A SKV +EA + + V ACDP+++A+ VE+ M+EK
Sbjct: 153 -LTSMIKCNDALRDKFREILYEAFSKVVNEAEGE-DLARVNACDPVRIAVSVETVMFEKL 210
Query: 186 CRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHL 245
RSNG KFKYR ++FN+ D N D RR+VLLG +KPE +I M+A+EMASD +L N +
Sbjct: 211 GRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMASDNRKLENKQI 270
Query: 246 DKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCN 304
KD AL G+ K +D ++CG+CG + YQ + D +T VTC+NCN
Sbjct: 271 -KDKALFECE---RGMKPK-ATTDQFKCGKCGQRMCTYYQLQTRSADEPMTTFVTCVNCN 325
Query: 305 QYW 307
+W
Sbjct: 326 NHW 328
>gi|224286619|gb|ACN41014.1| unknown [Picea sitchensis]
Length = 328
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/330 (38%), Positives = 191/330 (57%), Gaps = 34/330 (10%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPM 60
+EK++++L E K+AA A+ E EE RC+DAL ++ +T +LVSTQV + L +
Sbjct: 7 VEKELLELFEKVKKAADKAITNEA--EEQRCLDALKALRAVPVTMGVLVSTQVGKRLRNL 64
Query: 61 LKHPSQKIQKLAYDLISSWRDMCWD--VEDVEYVAVTKKAKLVENVKVEE---------- 108
KHP + I LA DL+ SW+ + + + A + K +++KVE+
Sbjct: 65 TKHPQENICTLATDLLDSWKKVVTSETLANSGNKATQSEDKQSKSIKVEDNAVKRESVKV 124
Query: 109 ----------VTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAAD 158
+TN + S N P K ++ MIKCND+ R+ +RE +Y+A SKV +EA
Sbjct: 125 EKKPKEEEASITN--KNVSSSSNGPPK-LTSMIKCNDAVRDKIREIIYEAFSKVVNEAEG 181
Query: 159 KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLG 218
+ + + ACDP++VA+ VE+ M+EK RSNG K KYR ++FN+ D N D RR+VLLG
Sbjct: 182 ENMVR-INACDPVRVAVTVETLMFEKLGRSNGAQKLKYRSIIFNLKDANNPDLRRRVLLG 240
Query: 219 HVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGH 278
+KPE +I M+A+EMASD+ +L N + KD AL G+ K +D ++CG+CG
Sbjct: 241 EIKPEKLIVMTAEEMASDQRKLENKQI-KDKALFECE---RGIKPK-ATTDQFKCGKCGQ 295
Query: 279 NKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
K + YQ + D +T VTC+NCN +W
Sbjct: 296 RKCTYYQLQTRSADEPMTTFVTCVNCNNHW 325
>gi|388514187|gb|AFK45155.1| unknown [Medicago truncatula]
Length = 369
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 192/365 (52%), Gaps = 69/365 (18%)
Query: 5 VMDLCEAAKRAAVAAVWKEGV-VEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKH 63
+++L EAAK+AA A+ + EE RC+DAL+Q+KN + Y++LV+TQV +HL + KH
Sbjct: 9 LVELYEAAKKAADASTSTDNSPSEETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLTKH 68
Query: 64 PSQKIQKLAYDLISSWRDM------------------CWDVEDVEYVAVTK----KAKLV 101
P + I+ A DLI+ W+D+ + E + + K K +
Sbjct: 69 PRENIRTFAVDLIAIWKDVIIKETSKNKNGASDSKVESTNGERAKAGKLQKSPSVKVEKG 128
Query: 102 ENVKVEEVTNGEERRHDSGNV--------------------------------------P 123
E+ KVE+V + SGNV P
Sbjct: 129 ESAKVEKVNGNGSSKLSSGNVRAQNVDVKIEKTDRTSNIKAKEEKPVSAAKKISSSAAAP 188
Query: 124 KKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE 183
K + MIK NDS R+ +RE L DAL+KV +EA D+ +D V ACDPI+VA+ VES ++E
Sbjct: 189 PK-LKTMIKSNDSARDKIRELLRDALAKVFEEA-DEDMMDEVNACDPIRVAVTVESVLFE 246
Query: 184 KWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNH 243
W SNG K KYR L+FN+ D +N DFRRKVLLG V+P+ + MS+ EMAS++ + N
Sbjct: 247 NWGPSNGAQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRLAVMSSAEMASEQRKQENE 306
Query: 244 HLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLN 302
+++ GL K +D ++CGRCG K + YQ + D +T +VTC+N
Sbjct: 307 KIEQKALFDCER----GLQPK-ATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVN 361
Query: 303 CNQYW 307
CN W
Sbjct: 362 CNNRW 366
>gi|224087871|ref|XP_002308256.1| predicted protein [Populus trichocarpa]
gi|222854232|gb|EEE91779.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 196/357 (54%), Gaps = 58/357 (16%)
Query: 1 MEKKVMDLCEAAKRAAVAA----VWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRH 56
ME + ++L + AK+AA A+ V G E RC+D+L Q++ +T +LLVSTQV +
Sbjct: 1 MEMEFVELFDEAKKAADASLNDDVSSSGP-EVTRCVDSLKQLRKFKVTSELLVSTQVGKK 59
Query: 57 LLPMLKHPSQKIQKLAYDLISSWRDMCWD--------------------------VEDVE 90
L P+ KHP +KI+ +A DL+ W+ M D VE +
Sbjct: 60 LRPLAKHPKEKIRAVASDLLEMWKKMVIDETRKKNGSIDSKSSVKAEVSKSETVKVEKLR 119
Query: 91 YVAVTK--KAKLVENVKVE----------EVTNGEERRHDSGNVPKKS------ISCMIK 132
+V K +A E VKVE E + +E + S P +S + ++K
Sbjct: 120 KTSVVKVERASTSETVKVEKMDQDKTVKVEKMSKQEIQTSSVKQPSQSPIGPPKLKTLVK 179
Query: 133 CNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
CND+ R+ +RE L +ALSKV+ EA + + D V+ACDPI+VA+ VES M+EK RSNG
Sbjct: 180 CNDALRDKIRELLAEALSKVASEADEDIR-DEVEACDPIRVAVSVESMMFEKLGRSNGAQ 238
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
K KYR ++FNI D N DFRRKVLLG V+PE ++ M +EMAS++ + N+ + K+ L
Sbjct: 239 KLKYRSIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGPEEMASEQRKRENNQI-KEKVL- 296
Query: 253 TGHIFPVGLSRKI-IVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
F S + +D ++CGRC K + YQ + D +T +VTC+NCN +W
Sbjct: 297 ----FDCERSGQAQATTDQFKCGRCRQRKCTYYQMQTRSADEPMTTYVTCVNCNNHW 349
>gi|255575598|ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 342
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 177/316 (56%), Gaps = 41/316 (12%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWD- 85
E RC+DAL Q+K I+Y +LVS+QV + L P+ KHP +KIQ +A DL+ W+ + D
Sbjct: 30 EVVRCVDALKQLKIFPISYDILVSSQVGKRLRPLTKHPREKIQTVASDLLEMWKKIVIDE 89
Query: 86 ------------------VEDVEYVAVTK--KAKLVE--------NVKVEEVTNGEE--- 114
V VE + V K KA V+ VKVE+ + ++
Sbjct: 90 TTRKKNGTVDNKSSVKAEVSKVETIKVEKVQKASTVKVEKIDRERTVKVEKKSEEKQQAI 149
Query: 115 --RRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQ 172
++ +V ++ ++KCND+ R+ +RE L +ALSKV EA + D + CDPI+
Sbjct: 150 DVKKPSQASVTPPKLTAIVKCNDALRDKIRELLVEALSKVVSEANEDGR-DEISKCDPIR 208
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
VA+ VESAM+EK RSNG KFKYR ++FN+ DP N D RRKVLLG VKPE +I+M+ +E
Sbjct: 209 VAVSVESAMFEKMGRSNGAQKFKYRSIMFNLKDPNNPDLRRKVLLGEVKPERLISMTPEE 268
Query: 233 MASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDD 291
MAS + Q + + + P + +D ++C RCG K + YQ + D
Sbjct: 269 MASKERQEEINQIKEKALFDCERGGPAKAT-----TDQFKCSRCGQRKCTYYQMQTRSAD 323
Query: 292 YNLTRHVTCLNCNQYW 307
+T +VTC+NCN++W
Sbjct: 324 EPMTTYVTCVNCNKHW 339
>gi|255637690|gb|ACU19168.1| unknown [Glycine max]
Length = 368
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 195/372 (52%), Gaps = 72/372 (19%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPM 60
MEK++++L EAAK+AA AA+ +G EE+RCIDA +Q+K + Y++LV+TQV +HL +
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGKHEESRCIDAFEQLKKFPVNYKILVNTQVGKHLKVL 60
Query: 61 LKHPSQKIQKLAYDLISSWRDM-------------------------------------- 82
KHP KI+ A DLI W+ +
Sbjct: 61 TKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDSKVESANGEKSKAGKMQKSPSVKV 120
Query: 83 ----CWDVEDVEYVAVTKKA----KLVEN------------VKVEEVT------NGEERR 116
VE ++ TK + K V+N VKVE++ +G ++
Sbjct: 121 EKGETVKVEKIDRNGTTKSSSENMKKVQNDVKNEKTDRSASVKVEKIAKEEKPVSGAKKM 180
Query: 117 HDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAIL 176
S P K + MIK ND+ R+ +RE L++ALSKV+ EA D+ +D+V DPI+VA+
Sbjct: 181 SSSSAAPPK-LKTMIKSNDATRDKIREILHEALSKVTGEA-DEDLVDVVNNSDPIRVAVT 238
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
VES ++EKW SNG K KYR L+FN+ D N DFRRKVLLG ++PE +INMS EMAS+
Sbjct: 239 VESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEMASE 298
Query: 237 KIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLT 295
+ + + + P + +D ++CGRCG K + YQ + D +T
Sbjct: 299 QRKQEYQKITEKALFECERGGPPKAT-----TDQFKCGRCGQRKTTYYQMQTRSADEPMT 353
Query: 296 RHVTCLNCNQYW 307
HVTC+ CN W
Sbjct: 354 THVTCVVCNNRW 365
>gi|356509090|ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
[Glycine max]
Length = 368
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 196/372 (52%), Gaps = 72/372 (19%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPM 60
MEK++++L EAAK+AA AA+ +G EE+RCIDAL+Q+K + Y++LV+TQV +HL +
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGKHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60
Query: 61 LKHPSQKIQKLAYDLISSWRDM-------------------------------------- 82
KHP KI+ A DLI W+ +
Sbjct: 61 TKHPRLKIKAFAIDLIEIWKGIIIKETSKNKNGGSDSKVESANGEKSKAGKMQKSPSVKV 120
Query: 83 ----CWDVEDVEYVAVTKKA----KLVEN------------VKVEEVT------NGEERR 116
VE ++ TK + K V+N VKVE++ +G ++
Sbjct: 121 EKGETVKVEKIDRNGTTKSSSENMKKVQNDVKNEKTDRSASVKVEKIAKEEKPVSGAKKM 180
Query: 117 HDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAIL 176
S P K + MIK ND+ R+ +RE L++ALSKV+ EA D+ +D+V DPI+VA+
Sbjct: 181 SSSSAAPPK-LKTMIKSNDATRDKIREILHEALSKVTGEA-DEDLVDVVNNSDPIRVAVT 238
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
VES ++EKW SNG K KYR L+FN+ D N DFRRKVLLG ++PE +INMS EMAS+
Sbjct: 239 VESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEMASE 298
Query: 237 KIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLT 295
+ + + + P + +D ++CGRCG K + YQ + D +T
Sbjct: 299 QRKQEYQKITEKALFECERGGPPKAT-----TDQFKCGRCGQRKTTYYQMQTRSADEPMT 353
Query: 296 RHVTCLNCNQYW 307
+VTC+ CN W
Sbjct: 354 TYVTCVVCNNRW 365
>gi|194708758|gb|ACF88463.1| unknown [Zea mays]
Length = 376
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 175/346 (50%), Gaps = 69/346 (19%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWR------ 80
E RC+DAL ++++ + +LVSTQV + L P+ KHP IQ +A DL W+
Sbjct: 27 EAGRCLDALHRLRDIRVNTDILVSTQVGKRLRPLTKHPHSGIQAVASDLFGYWKKVVLEE 86
Query: 81 --------------DMCWDVEDVEYVAVTK----------------KAKLVENVKVEEV- 109
D VE V + V K + + +NVKVE+
Sbjct: 87 TGKKNGSSENEKSMDSSGKVEKVRPMKVEKNSASASMKVEKRDVDDRGQKPDNVKVEKTA 146
Query: 110 TNG-------------EERRHDS------GNVPKKSISCMIKCNDSFREIVREKLYDALS 150
+NG E R D+ N P K ++ ++KCND R+ +RE L +A +
Sbjct: 147 SNGSRTQSVKVERVSKEVNRTDAKKPASVPNGPPK-LTSLVKCNDPTRDKIRELLAEAFA 205
Query: 151 KVSDEAAD------KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
KV E ++ + +D V ACDP +VA+ VESA++E++ RS G +K KYR ++FN+
Sbjct: 206 KVPRETSNDDRDEVRNILDEVDACDPFRVAVTVESALFERFGRSTGAHKAKYRSIMFNLR 265
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
N DFRR+VL+G V PE + ++S EMASD + N + K+ AL G + K
Sbjct: 266 AENNTDFRRRVLIGQVTPERLPDISPDEMASDARKQENLQI-KEKALFDCE---RGAAPK 321
Query: 265 IIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYWVS 309
+D ++CGRCG K + YQ + D +T VTC+NCN +W S
Sbjct: 322 -ATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHWSS 366
>gi|226498648|ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
gi|194688540|gb|ACF78354.1| unknown [Zea mays]
gi|194707892|gb|ACF88030.1| unknown [Zea mays]
Length = 367
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 190/370 (51%), Gaps = 69/370 (18%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPM 60
ME+++++ +AAK+AA A + E RC+DAL ++++ + +LVSTQV + L P+
Sbjct: 1 MERELLETFDAAKKAADATAGQGDSPEAGRCLDALHRLRDIRVNTDILVSTQVGKRLRPL 60
Query: 61 LKHPSQKIQKLAYDLISSWR--------------------DMCWDVEDVEYVAVTK---- 96
KHP IQ +A DL W+ D VE V + V K
Sbjct: 61 TKHPHSGIQAVASDLFGYWKKVVLEETGKKNGSSENEKSMDSSGKVEKVRPMKVEKNSAS 120
Query: 97 ------------KAKLVENVKVEEV-TNG-------------EERRHDS------GNVPK 124
+ + +NVKVE+ +NG E R D+ N P
Sbjct: 121 ASMKVEKRDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTDAKKPASVPNGPP 180
Query: 125 KSISCMIKCNDSFREIVREKLYDALSKVSDEAAD------KVTIDLVKACDPIQVAILVE 178
K ++ ++KCND R+ +RE L +A +KV E ++ + +D V ACDP +VA+ VE
Sbjct: 181 K-LTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVE 239
Query: 179 SAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
SA++E++ RS G +K KYR ++FN+ N DFRR+VL+G V PE + ++S EMASD
Sbjct: 240 SALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASDAR 299
Query: 239 QLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRH 297
+ N + K+ AL G + K +D ++CGRCG K + YQ + D +T
Sbjct: 300 KQENLQI-KEKALFDCE---RGAAPK-ATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 354
Query: 298 VTCLNCNQYW 307
VTC+NCN +W
Sbjct: 355 VTCVNCNNHW 364
>gi|115456173|ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|108711747|gb|ABF99542.1| transcription elongation factor S-II family protein, expressed
[Oryza sativa Japonica Group]
gi|113550158|dbj|BAF13601.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 192/370 (51%), Gaps = 69/370 (18%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPM 60
ME+++++ EAAK+AA AA + E RC+DA+ +++ +T +LVSTQV + L +
Sbjct: 1 MERELLETFEAAKKAADAAAGADDSPEADRCLDAMRRLRGLRVTTDVLVSTQVGKRLRYL 60
Query: 61 LKHPSQKIQKLAYDLISSWRDM----------CWDVEDVEYVAVTKKAKLV--------- 101
KHP IQ +A DL+ W+ + +V A +KA+ +
Sbjct: 61 TKHPHSDIQSMATDLLGYWKKVVIEEGKKNGTTENVGSTNSAARAEKAQPMKVDKSSASG 120
Query: 102 ----------------ENVKVEEVTNGEE---------------RRHDS------GNVPK 124
E++KVE++TN + R D+ N P
Sbjct: 121 SVKPEKREVNVRGQKPESIKVEKITNNDSKNQQVKVERAPKEATRTPDTKKPSSVPNGPP 180
Query: 125 KSISCMIKCNDSFREIVREKLYDALSKVSDEAAD------KVTIDLVKACDPIQVAILVE 178
K ++ ++KCND R+ +RE L DA S+V E + + +D V A DP +VA+ VE
Sbjct: 181 K-LTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDARDPFRVAVTVE 239
Query: 179 SAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
SA++E+ RS G +K KYR ++FN+ N DFRR+VLLG V+PE ++++S +EMASD
Sbjct: 240 SALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDISPEEMASDAR 299
Query: 239 QLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRH 297
+L N + K+ AL G + K +D ++CGRCG K + YQ + D +T
Sbjct: 300 KLENKQI-KEKALFDCE---RGGAPK-ATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTF 354
Query: 298 VTCLNCNQYW 307
VTC+NCN +W
Sbjct: 355 VTCVNCNNHW 364
>gi|357124260|ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
[Brachypodium distachyon]
Length = 364
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 187/366 (51%), Gaps = 64/366 (17%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPM 60
ME+++++ EAAK+AA A G E RC+DAL +++ +T ++LVSTQV + L +
Sbjct: 1 MERELLETFEAAKKAADAVAEDAGSPEADRCLDALRRLRAFRVTTEVLVSTQVGKRLRYL 60
Query: 61 LKHPSQKIQKLAYDLISSWRDMCWD--------------------VEDVEYVAVTKKAKL 100
KHP IQ +A DL W+ + + +E + + V K + L
Sbjct: 61 TKHPHSDIQAMATDLFGYWKKIVIEETGKKNGTSANEKLDNSAARLEKSQSMKVEKNSSL 120
Query: 101 VE---------------NVKVEEVTNGEER---------------RHDSGNVPK--KSIS 128
+VKVE++ N + + S +VP ++
Sbjct: 121 ASVKIEKNDLDIRVQKSDVKVEKIANNDSKVKVEMVSKDVSRTLDTKKSSSVPNGPPRLT 180
Query: 129 CMIKCNDSFREIVREKLYDALSKVSDEAAD------KVTIDLVKACDPIQVAILVESAMY 182
+++CND+ R+ RE L +A KVS E + + +D V ACDP +V++ VESA++
Sbjct: 181 SLVRCNDAARDKYRELLAEAFFKVSKETSKDDREEVRNLLDEVNACDPYRVSVTVESALF 240
Query: 183 EKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWN 242
E+ RS G +K KYR +LFN+ N DFRR+VLLG V+P ++++S EMASD +L N
Sbjct: 241 ERLGRSTGAHKAKYRSILFNLKADNNPDFRRRVLLGEVRPGRLVDISPDEMASDARKLEN 300
Query: 243 HHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCL 301
+ K+ AL G + +D ++CGRCG K + YQ + D +T VTC+
Sbjct: 301 KQI-KEKALFDCE--RAGAPK--ATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCV 355
Query: 302 NCNQYW 307
NCN +W
Sbjct: 356 NCNNHW 361
>gi|115471257|ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|215737106|dbj|BAG96035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 379
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 185/375 (49%), Gaps = 73/375 (19%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVV--------EEARCIDALDQIKNSSITYQLLVSTQ 52
ME+++++ EAA++AA A E ARC+DAL +++ + +T LVSTQ
Sbjct: 7 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 66
Query: 53 VIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWD-------------------VEDVEYVA 93
+ R + + KHP I+ A DL+ W+ + + VE VE +
Sbjct: 67 IGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEEDKKNGALQNGKSSSTVVKVEKVEPMK 126
Query: 94 VTKKAKLV--------------ENVKVEEVTNGEERR------------HDSGNVPKKS- 126
V K + + KVE+ +N E R H +V K S
Sbjct: 127 VEKASPRATVNNNNMDTRVVNHKGGKVEKFSNAELRTQSIKVEKVQKVVHKVSSVEKPSP 186
Query: 127 -------ISCMIKCNDSFREIVREKLYDALSKVSDEAAD------KVTIDLVKACDPIQV 173
++ ++KC D+ R+ +R L DA S+VS+E + I+ VKACDP ++
Sbjct: 187 VQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRI 246
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A++VE A+++K NG K +YR L+FN+ D N DFRR+VLLG V+PE I +++ EM
Sbjct: 247 AVMVECALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEM 306
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDY 292
ASD +L N +++ G + K +D ++CGRCG K + YQ + D
Sbjct: 307 ASDTRKLENKKIEEKALFECER----GGAPK-ATTDQFKCGRCGQRKTTYYQLQTRSADE 361
Query: 293 NLTRHVTCLNCNQYW 307
+T VTC+NCN +W
Sbjct: 362 PMTTFVTCVNCNNHW 376
>gi|23617251|dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|125599607|gb|EAZ39183.1| hypothetical protein OsJ_23609 [Oryza sativa Japonica Group]
Length = 373
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 185/375 (49%), Gaps = 73/375 (19%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVV--------EEARCIDALDQIKNSSITYQLLVSTQ 52
ME+++++ EAA++AA A E ARC+DAL +++ + +T LVSTQ
Sbjct: 1 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 60
Query: 53 VIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWD-------------------VEDVEYVA 93
+ R + + KHP I+ A DL+ W+ + + VE VE +
Sbjct: 61 IGRRIRYLTKHPHSSIKATASDLLGHWKKVVIEEDKKNGALQNGKSSSTVVKVEKVEPMK 120
Query: 94 VTKKAKLV--------------ENVKVEEVTNGEERR------------HDSGNVPKKS- 126
V K + + KVE+ +N E R H +V K S
Sbjct: 121 VEKASPRATVNNNNMDTRVVNHKGGKVEKFSNAELRTQSIKVEKVQKVVHKVSSVEKPSP 180
Query: 127 -------ISCMIKCNDSFREIVREKLYDALSKVSDEAAD------KVTIDLVKACDPIQV 173
++ ++KC D+ R+ +R L DA S+VS+E + I+ VKACDP ++
Sbjct: 181 VQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRI 240
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A++VE A+++K NG K +YR L+FN+ D N DFRR+VLLG V+PE I +++ EM
Sbjct: 241 AVMVECALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEM 300
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDY 292
ASD +L N +++ G + K +D ++CGRCG K + YQ + D
Sbjct: 301 ASDTRKLENKKIEEKALFECER----GGAPK-ATTDQFKCGRCGQRKTTYYQLQTRSADE 355
Query: 293 NLTRHVTCLNCNQYW 307
+T VTC+NCN +W
Sbjct: 356 PMTTFVTCVNCNNHW 370
>gi|242032519|ref|XP_002463654.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
gi|241917508|gb|EER90652.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
Length = 368
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 168/346 (48%), Gaps = 72/346 (20%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWR------ 80
E RC+DAL ++++ + +LVSTQV + L P+ KHP IQ +A DL W+
Sbjct: 27 EADRCLDALRRLRDIRVNTDILVSTQVGKRLRPLTKHPHSGIQAVAADLFGYWKKVVLEE 86
Query: 81 --------------DMCWDVEDVEYVAVTKKA---------------------------- 98
D VE V + V K +
Sbjct: 87 SGKKNGGSENERSSDSSGKVEKVRPMKVEKNSASASMKVEKRDVDVRGQKPGSVKVEKTA 146
Query: 99 ---KLVENVKVEEVTNGEERRHDS-------GNVPKKSISCMIKCNDSFREIVREKLYDA 148
++VKVE V+ R D+ PK ++ ++KCND R+ +RE L +A
Sbjct: 147 SNGSRTQSVKVERVSKEVSRTPDAKKPASTPSGAPK--LTSLVKCNDPTRDKIRELLAEA 204
Query: 149 LSKVSDEAAD------KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFN 202
+KVS E ++ + +D V ACDP +VA+ VESA++E+ RS G +K KYR ++FN
Sbjct: 205 FAKVSRETSNDDRDEVRNILDEVDACDPYRVAVKVESALFERLGRSTGAHKTKYRSIMFN 264
Query: 203 ISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLS 262
+ N DFRR+VL+G V PE + ++S EMASD + N + K+ AL G
Sbjct: 265 LRAENNTDFRRRVLIGEVTPEGLPDISPDEMASDARKQENMQI-KEKALF--ECERAGAP 321
Query: 263 RKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+ +D ++CGRCG K + YQ + D +T VTC+NCN +W
Sbjct: 322 K--ATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHW 365
>gi|15224901|ref|NP_181390.1| transcript elongation factor IIS [Arabidopsis thaliana]
gi|3786016|gb|AAC67362.1| putative elongation factor [Arabidopsis thaliana]
gi|23297820|gb|AAN13033.1| putative elongation factor [Arabidopsis thaliana]
gi|26450199|dbj|BAC42218.1| putative elongation factor [Arabidopsis thaliana]
gi|330254456|gb|AEC09550.1| transcript elongation factor IIS [Arabidopsis thaliana]
Length = 378
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 190/382 (49%), Gaps = 82/382 (21%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVV----EEARCIDALDQIKNSSITYQLLVSTQVIRH 56
ME ++DL E AK+AA AA +GV E ++CIDAL Q+K +TY LV+TQV +
Sbjct: 1 MESDLIDLFEGAKKAADAAAL-DGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKK 59
Query: 57 LLPMLKHPSQKIQKLAYDLISSWRDMC-----------------------WDVEDVEYVA 93
L + KHP + I+ +A DL+ W+ + DVE A
Sbjct: 60 LRSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPA 119
Query: 94 VTKKAKL--------------------VENVKVE------EVTNGEERRHDSGNVPKKSI 127
K KL V VK+E +VTNG + + V + +
Sbjct: 120 PVKVQKLQRGDSAKSIKVERKEPDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAVKDEKV 179
Query: 128 S---------------------CMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVK 166
S M+KCND R+ +RE L +AL +V+ EA D + V
Sbjct: 180 SKDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLVEALCRVAGEA-DDYERESVN 238
Query: 167 ACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETII 226
A DP++VA+ VES M+EK RS G K KYR ++FN+ D N D RR+VL G + PE +I
Sbjct: 239 ASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLI 298
Query: 227 NMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQH 285
+SA++MASDK + N+ + K+ AL GL+ K +D ++CGRCG K + YQ
Sbjct: 299 TLSAEDMASDKRKQENNQI-KEKALFDCE---RGLAAK-ASTDQFKCGRCGQRKCTYYQM 353
Query: 286 SSILDDYNLTRHVTCLNCNQYW 307
+ D +T +VTC+NC+ +W
Sbjct: 354 QTRSADEPMTTYVTCVNCDNHW 375
>gi|18377737|gb|AAL67018.1| putative elongation factor [Arabidopsis thaliana]
Length = 378
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 190/382 (49%), Gaps = 82/382 (21%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVV----EEARCIDALDQIKNSSITYQLLVSTQVIRH 56
ME ++DL E AK+AA AA +GV E ++CIDAL Q+K +TY LV+TQV +
Sbjct: 1 MESDLIDLFEGAKKAADAAAL-DGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKK 59
Query: 57 LLPMLKHPSQKIQKLAYDLISSWRDMC-----------------------WDVEDVEYVA 93
L + KHP + I+ +A DL+ W+ + DVE A
Sbjct: 60 LRSLAKHPVEDIKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPA 119
Query: 94 VTKKAKL--------------------VENVKVE------EVTNGEERRHDSGNVPKKSI 127
K KL V VK+E +VTNG + + V + +
Sbjct: 120 PVKVQKLQRGDSAKSIKVERKEPDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAVKDEKV 179
Query: 128 S---------------------CMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVK 166
S M+KCND R+ +RE L +AL +V+ EA D + V
Sbjct: 180 SKDNQSSMKAPAKAANAPPKLTAMLKCNDPVRDKIRELLMEALCRVAGEA-DDYERESVN 238
Query: 167 ACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETII 226
A DP++VA+ VES M+EK RS G K KYR ++FN+ D N D RR+VL G + PE +I
Sbjct: 239 ASDPLRVAVSVESLMFEKLGRSTGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLI 298
Query: 227 NMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQH 285
+SA++MASDK + N+ + K+ AL GL+ K +D ++CGRCG K + YQ
Sbjct: 299 TLSAEDMASDKRKQENNQI-KEKALFDCE---RGLAAK-ASTDQFKCGRCGQRKCTYYQM 353
Query: 286 SSILDDYNLTRHVTCLNCNQYW 307
+ D +T +VTC+NC+ +W
Sbjct: 354 QTRSADEPMTTYVTCVNCDNHW 375
>gi|125557745|gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
Length = 373
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 184/375 (49%), Gaps = 73/375 (19%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVV--------EEARCIDALDQIKNSSITYQLLVSTQ 52
ME+++++ EAA++AA A E ARC+DAL +++ + +T LVSTQ
Sbjct: 1 MERELLEAFEAARKAADAVGEAAAAAGAGEGESPEAARCVDALRRLRGARVTTAALVSTQ 60
Query: 53 VIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWD-------------------VEDVEYVA 93
+ R + + KHP I+ A DL+ W+ + + VE VE +
Sbjct: 61 IGRRIRYLTKHPHSSIKTTASDLLGHWKKVVIEEDKKNGALQNGKSSSTVVKVEKVEPMK 120
Query: 94 VTKKAKLV--------------ENVKVEEVTNGEERR------------HDSGNVPKKS- 126
V K + + KVE+ +N E R H +V K S
Sbjct: 121 VEKASPRATVNNNNMDTRVVNHKGGKVEKFSNAELRTQSIKVEKVQKVVHKVSSVEKPSP 180
Query: 127 -------ISCMIKCNDSFREIVREKLYDALSKVSDEAAD------KVTIDLVKACDPIQV 173
++ ++KC D+ R+ +R L DA S+VS+E + I+ V+ACDP ++
Sbjct: 181 VQGGPPRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVQACDPFRI 240
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A++VE +++K NG K +YR L+FN+ D N DFRR+VLLG V+PE I +++ EM
Sbjct: 241 AVMVECPLFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEM 300
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDY 292
ASD +L N +++ G + K +D ++CGRCG K + YQ + D
Sbjct: 301 ASDTRKLENKKIEEKALFECER----GGAPK-ATTDQFKCGRCGQRKTTYYQLQTRSADE 355
Query: 293 NLTRHVTCLNCNQYW 307
+T VTC+NCN +W
Sbjct: 356 PMTTFVTCVNCNNHW 370
>gi|195622302|gb|ACG32981.1| transcription elongation factor A protein 2 [Zea mays]
gi|223947497|gb|ACN27832.1| unknown [Zea mays]
gi|413932648|gb|AFW67199.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 169/344 (49%), Gaps = 68/344 (19%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWR------ 80
E RC+DAL ++++ + +LVSTQV + L P+ KHP IQ +A DL W+
Sbjct: 27 EAGRCLDALRRLRDIRVNTDILVSTQVGKRLRPLTKHPHSGIQAVAADLFGYWKKVVLEE 86
Query: 81 --------------DMCWDVEDVEYVAVTK----------------KAKLVENVKVEEVT 110
D VE V V + K + + NVKVE+ T
Sbjct: 87 SGKKNGGSENERSSDSSGKVEKVRPVKIEKNSASASMKLEKRDVDVRGQKPNNVKVEKTT 146
Query: 111 -NGEE--------------RRHDS---GNVPK--KSISCMIKCNDSFREIVREKLYDALS 150
NG + R DS +VP ++ ++KCND R+ +RE L +A
Sbjct: 147 SNGSKAQSVKVERVSKEVIRTPDSKRPASVPNGHPKLTSLVKCNDPTRDKIRELLAEAFV 206
Query: 151 KVSDEAAD------KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
VS E +D K +D V+ACDP +VA+ VESA++E+ S G ++ KYR ++FN+
Sbjct: 207 SVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFERLGPSTGTHRAKYRSIMFNLR 266
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
N DFRR+VL+G V PE + ++ EMASD + N + K+ AL G + K
Sbjct: 267 AENNTDFRRRVLIGLVAPERLPDIPPDEMASDARKQENMQI-KEKALFDCE---RGAAPK 322
Query: 265 IIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+D ++C RCG K + YQ + D +T VTC+NCN +W
Sbjct: 323 -ATTDQFKCARCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHW 365
>gi|449499153|ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
[Cucumis sativus]
Length = 290
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 124/205 (60%), Gaps = 8/205 (3%)
Query: 104 VKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTID 163
VKVE V EE++ SG ++ MIK D+ R+ +RE L++A SKV EA D+ +D
Sbjct: 90 VKVERVVK-EEKKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEA-DEEFMD 147
Query: 164 LVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPE 223
V A DPI+VA+ VES M+E W S G K KYR ++FN+ DP+N DFRRKVLLG +KPE
Sbjct: 148 EVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPE 207
Query: 224 TIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS- 282
+INMS +MASD+ + N + + G + K +D ++CGRCG K +
Sbjct: 208 RMINMSTADMASDQRKRENEEIAQKALFDCER----GGAPK-ATTDQFKCGRCGQRKTTY 262
Query: 283 YQHSSILDDYNLTRHVTCLNCNQYW 307
YQ + D +T VTC+NCN +W
Sbjct: 263 YQLQTRSADEPMTTFVTCVNCNNHW 287
>gi|449441244|ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 124/205 (60%), Gaps = 8/205 (3%)
Query: 104 VKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTID 163
VKVE V EE++ SG ++ MIK D+ R+ +RE L++A SKV EA D+ +D
Sbjct: 169 VKVERVVK-EEKKPSSGAAAPPKLTSMIKSKDAARDKIRELLFEAFSKVPGEA-DEEFMD 226
Query: 164 LVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPE 223
V A DPI+VA+ VES M+E W S G K KYR ++FN+ DP+N DFRRKVLLG +KPE
Sbjct: 227 EVNASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPE 286
Query: 224 TIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS- 282
+INMS +MASD+ + N + + G + K +D ++CGRCG K +
Sbjct: 287 RMINMSTADMASDQRKRENEEIAQKALFDCER----GGAPK-ATTDQFKCGRCGQRKTTY 341
Query: 283 YQHSSILDDYNLTRHVTCLNCNQYW 307
YQ + D +T VTC+NCN +W
Sbjct: 342 YQLQTRSADEPMTTFVTCVNCNNHW 366
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%)
Query: 23 EGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDM 82
+G EE+RC+DAL Q+K +TYQ+LVSTQV + L + KHP +KIQ+ A DLI W+++
Sbjct: 25 DGGAEESRCLDALRQLKKFPVTYQILVSTQVGKRLRHLTKHPKKKIQEHASDLIEMWKEI 84
>gi|226504526|ref|NP_001149284.1| transcription elongation factor A protein 2 [Zea mays]
gi|195626030|gb|ACG34845.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/344 (32%), Positives = 168/344 (48%), Gaps = 68/344 (19%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWR------ 80
E RC+DAL ++++ + +LVSTQV + L P+ KHP IQ +A DL W+
Sbjct: 27 EAGRCLDALRRLRDIRVNTDILVSTQVGKRLRPLTKHPHSGIQAVAADLFGYWKKVVLEE 86
Query: 81 --------------DMCWDVEDVEYVAVTK----------------KAKLVENVKVEEVT 110
D VE V + K + + N KVE+ T
Sbjct: 87 SGKKNGGSENERSSDSSGKVEKARSVKIEKNSASASMKLEKRDVDVRGQKPNNAKVEKTT 146
Query: 111 -NGEE--------------RRHDS---GNVPK--KSISCMIKCNDSFREIVREKLYDALS 150
NG + R D+ +VP ++ ++KCND R+ +RE L +A
Sbjct: 147 SNGSKAQSVKVERVSKEVIRTPDAKRPASVPNGHPKLTSLVKCNDPTRDKIRELLAEAFV 206
Query: 151 KVSDEAAD------KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
+VS E +D + +D V+A DP +VA+ VESA++E+ S G ++ KYR ++FN+
Sbjct: 207 RVSRETSDDDRDEVRNILDEVEARDPYRVAVTVESALFERLGPSTGTHRAKYRSIMFNLR 266
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
N DFRR+VL+G V PE + ++S EMASD + N + K+ AL G + K
Sbjct: 267 AESNTDFRRRVLIGLVAPERLPDVSPDEMASDARKQENMQI-KEKALFDCE---RGAAPK 322
Query: 265 IIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+D ++C RCG K + YQ + D +T VTC+NCN +W
Sbjct: 323 -ATTDQFKCARCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHW 365
>gi|302757165|ref|XP_002962006.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
gi|302775328|ref|XP_002971081.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300161063|gb|EFJ27679.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300170665|gb|EFJ37266.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
Length = 303
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 169/305 (55%), Gaps = 13/305 (4%)
Query: 4 KVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKH 63
++ +L + A+ AA A EG EE RC++AL +++ +T LL+STQV + L + KH
Sbjct: 8 QLTELFKTAQSAAQKATAVEGA-EEDRCVEALQAMRSLRVTTSLLMSTQVGKQLRKLTKH 66
Query: 64 PSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVP 123
KI+ +A D++ W+ + + A K+ +V+ +V++ + +GN
Sbjct: 67 SRPKIRSIAVDILEDWKKVVSSEASSKSKAEGPKSSANASVEKGKVSS----KQSNGNSS 122
Query: 124 KKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE 183
K+ + K ND+ R+ +RE L +A KV EA + + A DP+QVA+ VE+A++
Sbjct: 123 SKARP-LPKSNDATRDKMREVLLEAFQKVPQEAEGQ-ELARANAKDPVQVAVEVENALFS 180
Query: 184 KWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNH 243
K + K KYR ++FN+ DP N D RR++LLG + + MSA++MASD+ + N
Sbjct: 181 KLESTKVDKKAKYRSIVFNLKDPNNPDLRRRLLLGQISGSQLTTMSAEDMASDQRKAENK 240
Query: 244 HLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLN 302
+ KD AL G+ ++ +D ++CG+CG + +Y Q + D +T +VTC+N
Sbjct: 241 QI-KDKALFECE---RGMKQE-ATTDQFKCGKCGRRECTYFQKQTRSADEPMTTYVTCVN 295
Query: 303 CNQYW 307
CN W
Sbjct: 296 CNNRW 300
>gi|356516223|ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like
[Glycine max]
Length = 367
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/371 (34%), Positives = 184/371 (49%), Gaps = 71/371 (19%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQ----------LLVS 50
MEK++++L EAAK+AA AA+ +G EE+RCIDAL+Q+K + Y+ L V
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGEHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60
Query: 51 TQVIRHLLP------------------------------------------MLKHPSQKI 68
T+ R + M K PS KI
Sbjct: 61 TKHPRQKIKSFAIDLIEIWKGIIIKETSKNKNGGSDSKDESANREKSKAGKMQKSPSVKI 120
Query: 69 QKLAYDLI----------SSWRDMCWDVEDVEYVAVTKKAKL-VENVKVEEVTNGEERRH 117
+K + SS+ +M DV+ + A + +E + E+ +G ++
Sbjct: 121 EKGETVKVEKIERNGTSKSSFENMKKVQNDVKNERTDRAASVKMEKIAEEKPISGAKKMS 180
Query: 118 DSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILV 177
S P K + MIK ND+ R+ +RE L++ALSKV+ EA D+ + +V DPI+VA+ V
Sbjct: 181 SSSTAPPK-LKTMIKSNDATRDKIREILHEALSKVTREA-DEDLVAVVNDSDPIRVAVTV 238
Query: 178 ESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDK 237
ES ++EKW SNG K KYR L+FN+ D N DFRRKVLLG V+PE +INMS EMAS++
Sbjct: 239 ESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMASEQ 298
Query: 238 IQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTR 296
+ + + G K +D ++CGRCG K + YQ + D +T
Sbjct: 299 RKQEYQKITEKALFECER----GGQPK-ATTDQFKCGRCGQRKTTYYQMQTRSADEPMTT 353
Query: 297 HVTCLNCNQYW 307
+VTC CN W
Sbjct: 354 YVTCCVCNNRW 364
>gi|414873584|tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea mays]
Length = 318
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 156/318 (49%), Gaps = 69/318 (21%)
Query: 53 VIRHLLPMLKHPSQKIQKLAYDLISSWR--------------------DMCWDVEDVEYV 92
V + L P+ KHP IQ +A DL W+ D VE V +
Sbjct: 4 VGKRLRPLTKHPHSGIQAVASDLFGYWKKVVLEETGKKNGSSENEKSMDSSGKVEKVRPM 63
Query: 93 AVTK----------------KAKLVENVKVEEV-TNG-------------EERRHDS--- 119
V K + + +NVKVE+ +NG E R D+
Sbjct: 64 KVEKNSASASMKVEKRDVDDRGQKPDNVKVEKTASNGSRTQSVKVERVSKEVNRTDAKKP 123
Query: 120 ---GNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAAD------KVTIDLVKACDP 170
N P K ++ ++KCND R+ +RE L +A +KV E ++ + +D V ACDP
Sbjct: 124 ASVPNGPPK-LTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDP 182
Query: 171 IQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
+VA+ VESA++E++ RS G +K KYR ++FN+ N DFRR+VL+G V PE + ++S
Sbjct: 183 FRVAVTVESALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISP 242
Query: 231 KEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSIL 289
EMASD + N + K+ AL G + K +D ++CGRCG K + YQ +
Sbjct: 243 DEMASDARKQENLQI-KEKALFDCE---RGAAPK-ATTDQFKCGRCGQRKTTYYQLQTRS 297
Query: 290 DDYNLTRHVTCLNCNQYW 307
D +T VTC+NCN +W
Sbjct: 298 ADEPMTTFVTCVNCNNHW 315
>gi|312283193|dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]
Length = 381
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 116/190 (61%), Gaps = 8/190 (4%)
Query: 119 SGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVE 178
S N P K ++ M+KCND R+ +RE L +ALS+V E+ D+ + V CDP +VA+ VE
Sbjct: 196 SPNAPPK-LTSMLKCNDPVRDKIREMLVEALSRVHGES-DEYDREKVNGCDPFRVAVSVE 253
Query: 179 SAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
S M+EK RS G K KYR ++FN+ D N D RR+VL G V PE +I +SA+EMASDK
Sbjct: 254 SHMFEKLGRSTGAEKAKYRSIMFNLRDSNNPDLRRRVLTGEVPPEKLITLSAEEMASDKR 313
Query: 239 QLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRH 297
+ N+ + K+ L P + +D ++CGRCG K + YQ + D +T +
Sbjct: 314 KQENNQI-KEKFLFNCEQGPAPKA----STDQFKCGRCGQRKCTYYQMQTRSADEPMTTY 368
Query: 298 VTCLNCNQYW 307
VTC+NCN +W
Sbjct: 369 VTCVNCNNHW 378
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVED 88
++C+DAL Q+K +TY LV+TQV + L + KHP ++I+ +A DL+ W+ +
Sbjct: 32 SQCLDALKQLKKFPVTYDTLVATQVGKKLRSLSKHPVEEIKSVATDLLEIWKKVV----- 86
Query: 89 VEYVAVTKKAKLVENVKVEEVTNGEERRHD 118
+E + KK VK E +G+ R D
Sbjct: 87 IEETSKAKKIGSTNGVKSETAKDGKIDRKD 116
>gi|37718881|gb|AAR01752.1| putative transcription elongation factor, 5'-partial [Oryza sativa
Japonica Group]
Length = 315
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 157/318 (49%), Gaps = 69/318 (21%)
Query: 53 VIRHLLPMLKHPSQKIQKLAYDLISSWRDM----------CWDVEDVEYVAVTKKAKLV- 101
V + L + KHP IQ +A DL+ W+ + +V A +KA+ +
Sbjct: 1 VGKRLRYLTKHPHSDIQSMATDLLGYWKKVVIEEGKKNGTTENVGSTNSAARAEKAQPMK 60
Query: 102 ------------------------ENVKVEEVTNGEE---------------RRHDS--- 119
E++KVE++TN + R D+
Sbjct: 61 VDKSSASGSVKPEKREVNVRGQKPESIKVEKITNNDSKNQQVKVERAPKEATRTPDTKKP 120
Query: 120 ---GNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAAD------KVTIDLVKACDP 170
N P K ++ ++KCND R+ +RE L DA S+V E + + +D V A DP
Sbjct: 121 SSVPNGPPK-LTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDARDP 179
Query: 171 IQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
+VA+ VESA++E+ RS G +K KYR ++FN+ N DFRR+VLLG V+PE ++++S
Sbjct: 180 FRVAVTVESALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDISP 239
Query: 231 KEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSIL 289
+EMASD +L N + K+ AL G + K +D ++CGRCG K + YQ +
Sbjct: 240 EEMASDARKLENKQI-KEKALFDCE---RGGAPK-ATTDQFKCGRCGQRKTTYYQLQTRS 294
Query: 290 DDYNLTRHVTCLNCNQYW 307
D +T VTC+NCN +W
Sbjct: 295 ADEPMTTFVTCVNCNNHW 312
>gi|255567202|ref|XP_002524582.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536135|gb|EEF37790.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 337
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 172/351 (49%), Gaps = 61/351 (17%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVS---TQVIRHL 57
ME++++DL A +++ +A E++C++AL +++ IT+ +L S V R
Sbjct: 1 MEEQLVDLYTVAWKSSRSAAL------ESKCLNALSRLRCFPITFDVLASIPSVDVFRGF 54
Query: 58 LPMLKHPSQKIQKLAYDLISSW------------------------RDMCWDVEDVEYVA 93
+ KHP+ KI L+ +I++W R + V
Sbjct: 55 KALTKHPNMKIVDLSARVIAAWCKKLLKQLHRYEDYVSSIQKQPCTRTTAPSKDQTSQVV 114
Query: 94 VT--KKAKLVEN-----VKVEEVTNGEERRHDSGNVPK-------KSISCMIKCNDSFRE 139
T K+AK+ N VK +V N ++ PK + + K ++S RE
Sbjct: 115 ATVPKEAKIDINANPRTVKALKVQNKSFKKVSRTQTPKILTPHPHSKAASIPKSSNSLRE 174
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
+RE++ ALS V +EA D +K CDPIQ+A +ESA++ KW SN + KYR L
Sbjct: 175 SIREQISQALSMVFNEAKH----DTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSL 230
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDG--ALVTGHIF 257
LFNI DP+N DFRRK+L+G +K E + M A +MASD++Q N + + G
Sbjct: 231 LFNIKDPKNPDFRRKILVGEIKAEEVAEMDAGQMASDEMQRKNQGIQAKSLWKCIVGR-- 288
Query: 258 PVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+ +D ++CG+CG + + YQ + D +T +VTC C+ +W
Sbjct: 289 -----EQEGTTDQFKCGKCGEKRTTYYQMQTRSADEPMTTYVTCTICDNHW 334
>gi|297823741|ref|XP_002879753.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297325592|gb|EFH56012.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 378
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 114/182 (62%), Gaps = 7/182 (3%)
Query: 127 ISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC 186
++ M+KCND R+ +RE L DAL +V+ EA D V A DP++VA+ VES M+EK
Sbjct: 200 LTAMLKCNDPVRDKIRELLVDALCRVAGEA-DDYERKSVNASDPLRVAVSVESLMFEKLG 258
Query: 187 RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLD 246
RS G K KYR ++FN+ D N D RR+VL G + PE +I +SA+EMASDK + N+ +
Sbjct: 259 RSTGAQKLKYRSIMFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNQI- 317
Query: 247 KDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQ 305
K+ AL GL+ K +D ++CGRCG K + YQ + D +T +VTC+NC+
Sbjct: 318 KEKALFDCE---RGLAAK-ASTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDN 373
Query: 306 YW 307
+W
Sbjct: 374 HW 375
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 14/86 (16%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDV 86
E ++C+DAL Q+K +TY LV+TQV + L + KHP ++I+ +A DL+ W+ +
Sbjct: 30 EVSQCLDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPIEEIKSVATDLLEIWKKV---- 85
Query: 87 EDVEYVAVTKKAKLVENVKVEEVTNG 112
+ T KAK E TNG
Sbjct: 86 ----VIGETAKAKKTEG------TNG 101
>gi|413932649|gb|AFW67200.1| hypothetical protein ZEAMMB73_561219 [Zea mays]
Length = 246
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 128/232 (55%), Gaps = 17/232 (7%)
Query: 88 DVEYVAVTKKAKLVENVKVEEVTNGEERRHDS---GNVPK--KSISCMIKCNDSFREIVR 142
+V+ T ++VKVE V+ R DS +VP ++ ++KCND R+ +R
Sbjct: 17 NVKVEKTTSNGSKAQSVKVERVSKEVIRTPDSKRPASVPNGHPKLTSLVKCNDPTRDKIR 76
Query: 143 EKLYDALSKVSDEAAD------KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKY 196
E L +A VS E +D K +D V+ACDP +VA+ VESA++E+ S G ++ KY
Sbjct: 77 ELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFERLGPSTGTHRAKY 136
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI 256
R ++FN+ N DFRR+VL+G V PE + ++ EMASD + N + K+ AL
Sbjct: 137 RSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMASDARKQENMQI-KEKALFDCE- 194
Query: 257 FPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
G + K +D ++C RCG K + YQ + D +T VTC+NCN +W
Sbjct: 195 --RGAAPK-ATTDQFKCARCGQRKTTYYQLQTRSADEPMTTFVTCVNCNNHW 243
>gi|255641093|gb|ACU20825.1| unknown [Glycine max]
Length = 350
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 173/353 (49%), Gaps = 85/353 (24%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIK----------NSSITYQLLVS 50
MEK++++L EAAK+AA AA+ +G EE+RCIDAL+Q+K N+ + L V
Sbjct: 1 MEKELVELYEAAKKAADAAISGDGEHEESRCIDALEQLKKFPVNYKILVNTQVGKHLKVL 60
Query: 51 TQVIRHLLP------------------------------------------MLKHPSQKI 68
T+ R + M K PS KI
Sbjct: 61 TKHPRQKIKSFAIDLIEIWKGIIIKETGKNKNGGSDSKDESANREKSKAGKMQKSPSVKI 120
Query: 69 QK---LAYDLI-------SSWRDMCWDVEDVEYVAVTKKAKL-VENVKVEEVTNGEERRH 117
+K + + I SS+ +M DV+ + A + +E + E+ +G ++
Sbjct: 121 EKGETVKVEKIERNGTSKSSFENMKKVQNDVKNERTDRAASVKMEKIAEEKPISGAKKMS 180
Query: 118 DSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILV 177
S P K + MIK +D+ R+ ++E L++ALSKV+ EA D+ + +V DPI+VA+ V
Sbjct: 181 SSSTAPPK-LKTMIKSSDATRDKIKEILHEALSKVTREA-DEDLVAVVNDSDPIRVAVTV 238
Query: 178 ESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDK 237
ES ++EKW SNG K KYR L+FN+ D N DFRRKVLLG V+PE +INMS EMAS+
Sbjct: 239 ESVLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMASE- 297
Query: 238 IQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD 290
Q + +KI ++EC R G K+ + S+ D
Sbjct: 298 -QRKQEY------------------QKITEKALFECERGGQPKLQPINLSVAD 331
>gi|168033194|ref|XP_001769101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679630|gb|EDQ66075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 168/375 (44%), Gaps = 74/375 (19%)
Query: 2 EKKVMDLCEAAKRAAVAAVWKEGVV--EEARCIDALDQIKNSSITYQLLVSTQVIRHLLP 59
E +++ L E A AA AV V+ EE RC +AL + ++ +L+STQV + L
Sbjct: 3 EAELVSLFEKASNAAEKAVSDGAVLAAEEMRCQEALKAMGAVEVSTSILLSTQVGKRLRK 62
Query: 60 MLKHPSQKIQKLAYDLISSWRDMCWDVEDV--------------EYVAVTKKAKLVEN-V 104
+ KH S KI A L+ W+ + D + E T A +V+ V
Sbjct: 63 LTKHQSSKISGSAQQLLEKWKKVVADEAAIKSGTSKEVSPTIKPETPGRTPPATVVKKEV 122
Query: 105 KVE-EVTNGEERRHDSGNV---PK--------------KSISCMIKCNDSFREIVREKLY 146
K E +V + R D+ N PK K++ M + + + + +
Sbjct: 123 KTEVKVYTSKTSRADTKNAVPSPKVESTNVSPSPRVETKNVRAMPQPHPAGKSATPLAPH 182
Query: 147 DA---------------LSKVSDEAADKVT---IDLVKAC---------------DPIQV 173
A L+K D D+ I+ K C D ++V
Sbjct: 183 TANGTANGSGFQPKVGNLTKAGDSTRDRFREFLIEAFKKCCSEVTDEHLAMVKKTDLVRV 242
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A+ VESA++ K +S G K KYR ++FN+ D N DFRR++L+G +KPE I NM+A +M
Sbjct: 243 AVAVESALFSKLGQSKGSEKAKYRSIMFNLKDQNNPDFRRRILIGEIKPEEIANMTADDM 302
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDY 292
ASD + N + ++ AL GL + + +D + CG+CG K +Y Q + D
Sbjct: 303 ASDARKKENESI-REKALFECE---RGL-QNVASTDQFRCGKCGQRKTTYFQLQTRSADE 357
Query: 293 NLTRHVTCLNCNQYW 307
+T V C+NCN W
Sbjct: 358 PMTTFVQCVNCNARW 372
>gi|147860975|emb|CAN82941.1| hypothetical protein VITISV_013128 [Vitis vinifera]
Length = 326
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 141/282 (50%), Gaps = 58/282 (20%)
Query: 42 SITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC----------WDVED--- 88
S T Q ++ V + L + KHP++KIQ LA DLI W+++ D+ED
Sbjct: 53 SETKQRVIDILVGKRLRTLTKHPTKKIQALASDLIDIWKNIVIEETTKNKKNGDLEDKES 112
Query: 89 -------VEYVAVTK--KAKLVENVKVEEVTNG-EERRHDSGNVPKKSISCMIKCNDSFR 138
E V T K EN+KVE+ T+G ++ H+ PK ++ + KCND+ R
Sbjct: 113 PKPVTANPENVKATPLLKVSKAENIKVEKQTSGVKKPSHNIVGPPK--LTSISKCNDALR 170
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
+ VRE L +ALSKV EA D+ +D V ACDPI+VA+
Sbjct: 171 DKVRELLSEALSKVVGEA-DEDIMDAVNACDPIRVAVFS--------------------- 208
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
D +N D RRKVLLG V PE ++ M +EMASD+ QL N + K+ AL +
Sbjct: 209 -----GDAKNPDLRRKVLLGQVMPERLLEMGPEEMASDRRQLENQQI-KEKALFDCEL-- 260
Query: 259 VGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVT 299
G + K +D ++CGRCG K + YQ + D +T VT
Sbjct: 261 -GAAPK-ATTDQFKCGRCGQRKTTYYQLQTRSADEPMTTFVT 300
>gi|383138603|gb|AFG50480.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138604|gb|AFG50481.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138605|gb|AFG50482.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138606|gb|AFG50483.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138607|gb|AFG50484.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138608|gb|AFG50485.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138609|gb|AFG50486.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138610|gb|AFG50487.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138611|gb|AFG50488.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138612|gb|AFG50489.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138613|gb|AFG50490.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138614|gb|AFG50491.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138615|gb|AFG50492.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138616|gb|AFG50493.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138617|gb|AFG50494.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138618|gb|AFG50495.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138619|gb|AFG50496.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
Query: 127 ISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC 186
++ MIKCND+ R+ RE LY+ALSKV+ EA + + V ACDP+++A+ VE+ M+EK
Sbjct: 31 LTSMIKCNDALRDKFREILYEALSKVASEAEGE-DLARVNACDPVRIAVSVETVMFEKLG 89
Query: 187 RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMA 234
RSNG KFKYR ++FN+ D N D RR+VLLG +KPE +I M+A+EMA
Sbjct: 90 RSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|361067733|gb|AEW08178.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 82/114 (71%), Gaps = 2/114 (1%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
N P K ++ MIKCND+ R+ RE LY+ALSKV EA + + V ACDP+++A+ VE+
Sbjct: 26 NGPPK-LTSMIKCNDALRDKFREILYEALSKVVSEAEGE-DLARVNACDPVRIAVSVETV 83
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMA 234
M+EK RSNG KFKYR ++FN+ D N D RR+VLLG +KPE +I M+A+EMA
Sbjct: 84 MFEKLGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|297736471|emb|CBI25342.3| unnamed protein product [Vitis vinifera]
Length = 302
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 121/197 (61%), Gaps = 21/197 (10%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVV-EEARCIDALDQIKNSSITYQLLVSTQVIRHLLP 59
MEK++++L EA K+AA AA G EE RC+DAL Q+K+ +TYQ+LVSTQV + L
Sbjct: 1 MEKELLELFEATKKAADAAAVNSGAPSEEERCLDALKQLKDFPVTYQVLVSTQVGKRLRT 60
Query: 60 MLKHPSQKIQKLAYDLISSWRDMC----------WDVEDVEYV-AVTKKAKLVENVKVEE 108
+ KHP++KIQ LA DLI W+++ D+ED E VT ENVK
Sbjct: 61 LTKHPTKKIQALASDLIDIWKNIVIEETTKNKKNGDLEDKESPKPVTANP---ENVKATP 117
Query: 109 VTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKAC 168
+ + H+ PK ++ + KCND+ R+ VRE L +ALSKV E AD+ +D V AC
Sbjct: 118 LL---KPSHNIVGPPK--LTSISKCNDALRDKVRELLSEALSKVVGE-ADEDIMDAVNAC 171
Query: 169 DPIQVAILVESAMYEKW 185
DPI+VA+ VES M+EKW
Sbjct: 172 DPIRVAVSVESVMFEKW 188
>gi|168041433|ref|XP_001773196.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675555|gb|EDQ62049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 353
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 102/182 (56%), Gaps = 7/182 (3%)
Query: 127 ISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC 186
I + K D R+ RE L DA K E D+ + +VK+ D ++V + VE+ ++ K
Sbjct: 175 IGHLPKSGDPNRDRFRELLLDAFKKCCSELTDEHS-KIVKSTDFVKVTLAVETVLFSKLG 233
Query: 187 RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLD 246
NG K KYR +LFN+ D N DFRR+VL+G +K E I+NM+A +MASD + N +
Sbjct: 234 LFNGKEKAKYRSILFNLKDQNNPDFRRRVLMGEIKSEEIVNMTADDMASDARKKENEVI- 292
Query: 247 KDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQ 305
++ AL G+ + + +D + CG+CG K +Y Q + D +T VTC+NCN
Sbjct: 293 REKALFECE---RGM-QNVASTDQFRCGKCGQRKTTYFQLQTRSADEPMTTFVTCVNCNA 348
Query: 306 YW 307
W
Sbjct: 349 RW 350
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 2 EKKVMDLCEAAKRAAVAAVWKEGVV--EEARCIDALDQIKNSSITYQLLVSTQVIRHLLP 59
E +++ E A +AA AV ++ EE RC + L + ++ LL+STQV + L
Sbjct: 3 EAELVSFFEKACKAADRAVSNGAILPAEEVRCQETLKAMGAVEVSTALLLSTQVGKRLRK 62
Query: 60 MLKHPSQKIQKLAYDLISSWRDMCWD 85
+ KH S KI A L+ W+ + D
Sbjct: 63 LTKHQSSKISASAQQLLEEWKKVVAD 88
>gi|255567144|ref|XP_002524553.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536106|gb|EEF37761.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 152
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 89/147 (60%), Gaps = 8/147 (5%)
Query: 163 DLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKP 222
D +K CDPIQ+A +ESA++ KW SN + KYR LLFNI DP+N DFRRK+L+G +K
Sbjct: 9 DTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKILVGEIKA 68
Query: 223 ETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSR-KIIVSDIYECGRCGHNKI 281
E + M A +MASD++Q K+ + ++ + R + +D ++CG+CG +
Sbjct: 69 EEVAEMDAGQMASDEMQR------KNQGIQAKSLWKCIVGREQEGTTDQFKCGKCGEKRT 122
Query: 282 S-YQHSSILDDYNLTRHVTCLNCNQYW 307
+ YQ + D +T +VTC C+ +W
Sbjct: 123 TYYQMQTRSADEPMTTYVTCTICDNHW 149
>gi|15227992|ref|NP_181801.1| F-box protein [Arabidopsis thaliana]
gi|4512680|gb|AAD21734.1| hypothetical protein [Arabidopsis thaliana]
gi|330255067|gb|AEC10161.1| F-box protein [Arabidopsis thaliana]
Length = 737
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 120/241 (49%), Gaps = 28/241 (11%)
Query: 2 EKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKN--SSITYQLLVSTQVIRHLLP 59
+++ ++L EAA RAA + + + +R +DA +++K+ +S+ +++ T + + L
Sbjct: 493 KQEFLELYEAALRAAKSVKGVKNSSKVSRFVDARNRLKDAPTSLACEVVSKTSMGKGLSF 552
Query: 60 MLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHD- 118
+ H + I+ L W + + +G E+ HD
Sbjct: 553 LNDHKNPHIRSEGRLLRDLWMKILY-------------------------ASGREKSHDR 587
Query: 119 SGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVE 178
V + S M K DS R+ VRE L +L KV+ E D V ACDP VA+ VE
Sbjct: 588 ETQVKIPTHSTMKKTGDSKRDKVREILQTSLVKVASEIVDTEMKTRVTACDPSVVAVSVE 647
Query: 179 SAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
SAM+EK G +K KYR +LFN+ D N D RRKVL+G + E ++ M +EM S+KI
Sbjct: 648 SAMFEKLGCFMGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEMGSEKI 707
Query: 239 Q 239
Q
Sbjct: 708 Q 708
>gi|159474128|ref|XP_001695181.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276115|gb|EDP01889.1| predicted protein [Chlamydomonas reinhardtii]
Length = 348
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 129/324 (39%), Gaps = 49/324 (15%)
Query: 26 VEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDM--- 82
EEAR +D L Q++ +T LL T + L KH S + K A + +W+
Sbjct: 29 AEEARMLDVLKQLQRRGVTADLLKRTNAGKRLNKFCKHASDAVSKSAKAAVEAWKQCVKK 88
Query: 83 -CWDVEDVEYVAVTKKAKL------------------VENVKVEEVTNGEERRHDSGNV- 122
D D ++ AK + G R S
Sbjct: 89 ETADGGDTAEGGASQPAKAPMANDSAAGGREGQPLAGASAAPASGTSGGGLRSAGSSQQL 148
Query: 123 ----PKKSISCM----IKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVA 174
P S S +C + R+ VR L +AL+ D L P Q+
Sbjct: 149 LTRQPSASSSGFSVDPPRCGNETRDKVRSMLAEALAVGYVGGGDTGPSSLQ---SPNQLG 205
Query: 175 ILVESAMYEKWCRS----------NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPET 224
+E A+Y+ + YK K R L FN+ D +N D R +VL G V PET
Sbjct: 206 AAIEEALYDLMGGGGGGGGGREAVSAEYKAKARSLCFNLKDAKNPDLRERVLSGSVPPET 265
Query: 225 IINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-Y 283
++ +SA+EMASD+ + N L + L + G + +D+++CGRC K + Y
Sbjct: 266 LVRLSAEEMASDEQKKKNRELKE--WLAKEAVR--GATTNAATTDMFQCGRCKQRKCTYY 321
Query: 284 QHSSILDDYNLTRHVTCLNCNQYW 307
Q + D +T VTC NC Q W
Sbjct: 322 QLQTRSADEPMTTFVTCTNCGQRW 345
>gi|224137638|ref|XP_002322607.1| predicted protein [Populus trichocarpa]
gi|222867237|gb|EEF04368.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Query: 131 IKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNG 190
+KC+D R VR L ++L +V+ E + + ++ V+ DPI VA VES M+E+ NG
Sbjct: 197 VKCSDGLRSKVRHILVESLCRVAKEVKEDL-MEAVRLRDPIIVAADVESLMFERMGLFNG 255
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
+ KYR +LFN+ DP+N D RRKVLLG +KPE ++ M+A+EMAS++ Q N + K
Sbjct: 256 TKQLKYRSILFNMKDPKNPDLRRKVLLGQIKPEKLVTMTAEEMASNQRQFENDQIRK 312
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEA-RCIDALDQIKNSSIT-YQLLVSTQVIRHLL 58
MEK+ + L E+AK++A + E RC+DALDQ+K +T ++LVST V + +
Sbjct: 1 MEKQFLSLFESAKKSAAIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKEVQ 60
Query: 59 PMLKHPSQKIQKLAYDLISSW 79
+ KH + I+ A L+ +W
Sbjct: 61 YLTKHRVKMIRTAASCLLDAW 81
>gi|224094063|ref|XP_002334806.1| predicted protein [Populus trichocarpa]
gi|222875111|gb|EEF12242.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Query: 131 IKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNG 190
+KC+D R VR L ++L +V+ E + + ++ V+ DPI VA VES M+E+ NG
Sbjct: 197 VKCSDGLRSKVRHILVESLCRVAKEVKEDL-MEAVRLRDPIIVAADVESLMFERMGLFNG 255
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
+ KYR +LFN+ DP+N D RRK+LLG +KPE ++ M+A+EMAS++ Q N + K
Sbjct: 256 TKQLKYRSILFNMKDPKNPDLRRKLLLGQIKPEKLVTMTAEEMASNQRQFENDQIRK 312
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEA-RCIDALDQIKNSSIT-YQLLVSTQVIRHLL 58
MEK+ + L E+AK++A + E RC+DALDQ+K +T ++LVST V + +
Sbjct: 1 MEKQFLSLFESAKKSAAIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKEVQ 60
Query: 59 PMLKHPSQKIQKLAYDLISSW 79
+ KH + I+ A L+ +W
Sbjct: 61 YLTKHRVKMIRTAASCLLDAW 81
>gi|15233998|ref|NP_193607.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|4539391|emb|CAB37457.1| putative protein [Arabidopsis thaliana]
gi|7268666|emb|CAB78874.1| putative protein [Arabidopsis thaliana]
gi|332658681|gb|AEE84081.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 266
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 25/236 (10%)
Query: 2 EKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNS--SITYQLLVSTQVIRHLLP 59
+++ M+L EAA RAA + E E +R +DA++++K + S+ ++ T + + L
Sbjct: 3 KREFMELFEAALRAAKSVKGDENSPEVSRFVDAMNRLKEAPKSLVCDVVCKTSMGQGLEF 62
Query: 60 MLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDS 119
+ H + KI+ L W +++ + + K +N R +
Sbjct: 63 FIDHKNPKIRSEGRILRDLW---------MKFFYASGREKSRDN------------REAA 101
Query: 120 GNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVES 179
+P + + M K DS R+ VRE L +L+KV+ E D V ACDP VA+ VE+
Sbjct: 102 VKIP--THATMKKTGDSKRDKVREILQTSLAKVASEVVDTEMKTRVTACDPWVVAVSVET 159
Query: 180 AMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMAS 235
AM+E G K KYR +LFN+ D N D RRKVLLG + E ++ M +EM S
Sbjct: 160 AMFENLGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEKEEMGS 215
>gi|224086771|ref|XP_002307957.1| predicted protein [Populus trichocarpa]
gi|222853933|gb|EEE91480.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 131 IKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNG 190
+KC+D+ R VR L ++L++V+ E + V + DPI VA VES M++K NG
Sbjct: 275 VKCDDALRGKVRSILVESLTRVAKETEAGLR-RAVSSRDPICVAADVESVMFQKMGAFNG 333
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHL 245
KYR +LFN+ DP+N D RRKVLLG +KPE ++ M+++EMAS+ Q N +
Sbjct: 334 AKTVKYRSVLFNLKDPKNPDLRRKVLLGQIKPEKLVTMTSEEMASNHRQFENAQI 388
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEA-RCIDALDQIKN-SSITYQLLVSTQVIRHLL 58
ME++ + L E+AK +A AAV ++ E RC+ AL Q+K I+ ++L+ T V + +
Sbjct: 1 MEQQFLSLFESAKTSADAAVTSSSMIPEVHRCLAALGQLKRFPVISSRVLLFTPVAKQVE 60
Query: 59 PMLKHPSQKIQKLAYDLISSWRDMCW 84
+ +HP + I+ A L+ +WR +
Sbjct: 61 CLTRHPVKMIKTAASCLLYTWRRKLY 86
>gi|444729710|gb|ELW70117.1| Transcription elongation factor A protein 2 [Tupaia chinensis]
Length = 298
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 31/288 (10%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQK-IQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT QLL ST+V + + K S K + LA LI SW+ + D +
Sbjct: 27 LDLLRELKAIPITLQLLRSTRVFMSVKALQKQSSDKEVIALAKSLIKSWKKL-LKTSDAK 85
Query: 91 YVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKK---------SISCMIKCNDSFREI 140
+ A L + K EVT+ ++ + +P S++C D+ R
Sbjct: 86 ASNFERDAPLPMSSKDASEVTDPSPKKSEQPRMPTTPRITAFLPGSVTC-----DAIRSK 140
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL 200
E L AL K D A L C+ + I E +++ ++G YK + R +
Sbjct: 141 CCEMLTAALQKDLDYVA------LGADCESLSAQI--EESIFRDIGNTDGKYKNRVRSRI 192
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVG 260
FN+ D +N D RRKVL G + P+ I M+A+EMASD+++ + ++ A+ G
Sbjct: 193 FNLRDAKNPDLRRKVLRGVITPQQIAVMTAEEMASDEMKEIRKAMTRE-AIRKHQKARTG 251
Query: 261 LSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ +D+ CG+C +Y Q + D +T V C C W
Sbjct: 252 GTQ----TDLITCGKCSGKSCTYTQAQTRSSDEPMTTFVLCNECGNRW 295
>gi|303290875|ref|XP_003064724.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453750|gb|EEH51058.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 325
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 90/177 (50%), Gaps = 15/177 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
D R+ RE L +A+++ +++ D Q AI +E+AM+ +W + YK
Sbjct: 158 GDPLRDRTRELLAEAIAQAIGAPDVYASVE-----DVAQTAIAIENAMHAQWSDTGKEYK 212
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGA--L 251
K+R L FN+ DP+N D RR V G + P ++++S +E+ SD+ + N + +
Sbjct: 213 AKFRQLSFNLKDPKNPDLRRSVADGLISPAVLLDLSPEELGSDERRNSNAKIREHATNEA 272
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
V G +K +D ++CG+C K + YQ + D +T VTC+NC+ W
Sbjct: 273 VRGQ-------KKEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVNCDNRW 322
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + + R D NV +SC + +DS R
Sbjct: 82 TDKDTEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNVRDTYVSCFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 132/287 (45%), Gaps = 17/287 (5%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 24 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 83
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIV 141
D E+ + + + + ++ R + G+ P S S + V
Sbjct: 84 TDKDSEEKKKEPASSSQNSPDAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPSTSDSV 143
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLF 201
R K + LS D + I D ++ L+E A++++ ++ YK + R +
Sbjct: 144 RVKCREMLSAALRTGDDYIAI----GADEEELGSLIEEAIFQELKNTDMKYKNRVRSRIA 199
Query: 202 NISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGL 261
N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ + G
Sbjct: 200 NLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKE-AIREHQMAKTGG 258
Query: 262 SRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 259 TQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 301
>gi|302831355|ref|XP_002947243.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
gi|300267650|gb|EFJ51833.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
Length = 304
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 130/309 (42%), Gaps = 63/309 (20%)
Query: 26 VEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC-- 83
+E+R +D L Q++ +T +LL T + L KH + + A + +W+
Sbjct: 29 ADESRMLDVLKQLQKGLVTAELLKRTNAGKRLNKFCKHSCVSVAQAAKAAVEAWKQCVKQ 88
Query: 84 -------WDVEDVEYVAVTK----------KAKLVENVKVEEVTNGEERRHDSGNVPKKS 126
+ E + VA + +A L K +T+G G + +
Sbjct: 89 EQQQNDGGEAETPDAVAQREAPASTSQPGLRAPLALTGKASAMTSG------VGAGQRPT 142
Query: 127 ISCMI----KCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMY 182
+ I +C + R+ VR L +AL+ + ++E A++
Sbjct: 143 CASFIVDPPRCGNDTRDKVRVMLAEALAVGFNSGG-----------------AVIEDALH 185
Query: 183 EKWCRS----NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
E S +G YK K R L FN+ D +N D R +VL G + PE+++ MSA+E+ASD+
Sbjct: 186 ELLAGSGSSVSGEYKAKARSLCFNLKDAKNPDLRERVLSGSIPPESLVRMSAEELASDEQ 245
Query: 239 QLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILDDYNLTRHV 298
+ N + + L V +D+++CGRC K +Y Y +T V
Sbjct: 246 KRKNREMKE--WLAKEATRGV---NNAATTDMFQCGRCKQRKCTY--------YPMTTFV 292
Query: 299 TCLNCNQYW 307
TC NC Q W
Sbjct: 293 TCTNCGQRW 301
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 24 AGALDLLKELKNMPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 83
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNV---------PKKSISCMIK 132
D ED + A + E + ++ R + N P+ I+
Sbjct: 84 NDKDSEDKKKEAASSSQNSPEAREESSSSSNSSNRKEESNTGSDAFISSFPRAPIT---- 139
Query: 133 CNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
+DS R RE L AL K D D + I D ++ +E A++++ ++ Y
Sbjct: 140 -SDSVRMKCREMLAAAL-KTGD---DYIAI----GADEEELGSQIEEAIFQELKNTDMKY 190
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
K + R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 191 KNRVRSRIANLKDTKNPNLRKNVLCGNIAPDRFAKMTAEEMASDELKEMRKNLTKE-AIR 249
Query: 253 TGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYWVS 309
+ G ++ +D++ CG+C +Y Q + D +T V C C W S
Sbjct: 250 EHQMAKTGGTQ----TDLFSCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKS 303
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 23/289 (7%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQK-IQKLAYDLISSWRDMC-WDV 86
A +D L ++KN +T +LL ST++ + + K ++ + LA LI SW+ +
Sbjct: 26 AGALDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEEVTSLAKSLIKSWKKLLDGPS 85
Query: 87 EDVEYVAVTKKAKLVENVKVEE----VTNGEERRHDSGNVPKKSISCMIKC---NDSFRE 139
D+E + A + + E TN R+ + I+ + +DS R
Sbjct: 86 ADMEEKRKDQPAPAQNSPEAREESSSSTNISARKEECPAPSDGFITSFPRAPSTSDSVRI 145
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL D A +D ++ +E A+++++ + YK + R
Sbjct: 146 KCRELLATALKTGDDHIAIGADVD--------ELGAQIEEAVFQEFKNTEAKYKNRIRSR 197
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N + RR VL G++ P+ MSA+EMASD+++ +L K+ A+ +
Sbjct: 198 IANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASDELKEMRKNLTKE-AIREHQMART 256
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G + +D++ CG+C +Y Q + D +T V C C W
Sbjct: 257 GGTE----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVFCNECGNRW 301
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 88 DVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---NDSFR 138
+ + KK + + + E ++G R D N +S + +DS R
Sbjct: 82 TEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEMRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 143/321 (44%), Gaps = 30/321 (9%)
Query: 11 AAKRAAVAAVWKEGVVEE------ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHP 64
A A+ WK ++ + A +D L ++KN +T +LL ST++ + + K
Sbjct: 95 AVGSGALEVRWKRALLSDPDVGPVAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQS 154
Query: 65 S-QKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEV------TNGEERRH 117
+ +++ LA LI SW+ + + KK L+ + E + R
Sbjct: 155 TDEEVTSLAKSLIKSWKKLLDGPSTDKDTEEKKKEPLITSQNSPEAREESSSSGNVSSRK 214
Query: 118 DSGNVPKKSISCMIKC---NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVA 174
D N +S + +DS R RE L AL + D D + I D ++
Sbjct: 215 DETNARDTYVSSFPRAPSTSDSVRLKCREMLAAAL-RTGD---DYIAI----GADEEELG 266
Query: 175 ILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMA 234
+E A+Y++ ++ YK + R + N+ D +N + R+ VL G++ P+ M+A+EMA
Sbjct: 267 SQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMA 326
Query: 235 SDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYN 293
SD+++ +L K+ A+ + G ++ +D++ CG+C +Y Q + D
Sbjct: 327 SDELKEMRKNLTKE-AIREHQMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEP 381
Query: 294 LTRHVTCLNCNQYWVSTNLSF 314
+T V C C W L F
Sbjct: 382 MTTFVVCNECGNRWKVNILCF 402
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 88 DVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---NDSFR 138
+ + KK + + + E ++G R D N +S + +DS R
Sbjct: 82 TEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 88 DVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---NDSFR 138
+ + KK + + + E ++G R D N +S + +DS R
Sbjct: 82 TEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 88 DVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---NDSFR 138
+ + KK + + + E ++G R D N +S + +DS R
Sbjct: 82 TEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 30/293 (10%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ + D
Sbjct: 44 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL-LDGP 102
Query: 88 DVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKK------------SISCMIKCND 135
E KK + + + E SGNV + S +D
Sbjct: 103 STEKDLDEKKKEPA--ITSQNSPEAREESTSSGNVSNRKDERNARDTYVSSFPRAPSTSD 160
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S R RE L AL + D D + I D ++ +E A+Y++ ++ YK +
Sbjct: 161 SVRLKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNR 212
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 213 VRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQ 271
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 272 MAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 320
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 88 DVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---NDSFR 138
+ + KK + + + E ++G R D N +S + +DS R
Sbjct: 82 TEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 8 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 67
Query: 88 DVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---NDSFR 138
+ + KK + + + E ++G R D N +S + +DS R
Sbjct: 68 TEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVR 127
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 128 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 179
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 180 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 238
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 239 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 284
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 30/293 (10%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ + D
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL-LDGP 80
Query: 88 DVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKK------------SISCMIKCND 135
E KK + + + E SGNV + S +D
Sbjct: 81 STEKDLDEKKKEPA--ITSQNSPEAREESTSSGNVSNRKDETNARDTYLSSFPRAPSTSD 138
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S R RE L AL + D D + I D ++ +E A+Y++ ++ YK +
Sbjct: 139 SVRLKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNR 190
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 191 VRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQ 249
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 250 MAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 30/293 (10%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ + D
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL-LDGP 80
Query: 88 DVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKK------------SISCMIKCND 135
E KK + + + E SGNV + S +D
Sbjct: 81 STEKDLDEKKKEPA--ITSQNSPEAREESTSSGNVSNRKDERNARDTYVSSFPRAPSTSD 138
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S R RE L AL + D D + I D ++ +E A+Y++ ++ YK +
Sbjct: 139 SVRLKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNR 190
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 191 VRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQ 249
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 250 MAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 131/289 (45%), Gaps = 22/289 (7%)
Query: 25 VVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ-KIQKLAYDLISSWRDMC 83
V EEA +D L ++K+ IT + L T++ + M K + +Q LA LI W+ +
Sbjct: 25 VPEEA--VDLLTKLKDLPITLECLQKTRIGMSVNTMRKKSNNSNVQTLAKSLIKLWKKLL 82
Query: 84 WDVEDVEYVAVTKKAKLVENVKVE-EVTNGEERRHDSGNVPK--KSISCMIKCND-SFRE 139
+ + A KA ++ + + + D+ PK K IS D S R
Sbjct: 83 PEKSGSDKKADNGKASSEKSSRSTSPALSTKSDTSDAPTTPKDNKPISFPNTITDESVRG 142
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE + ++L +V + P +VA E ++E++ +N YK + R
Sbjct: 143 KCREMIVNSL---------QVQGEFEAVTKPEEVAAACEQLIFEEFKDTNVKYKQRIRSR 193
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ DP+N + +VL G + P + M+++EMASD+++ K+G
Sbjct: 194 VNNLRDPKNPMLKVRVLGGEISPARLAVMTSEEMASDEMKKLRQEFTKEGIREAQMAKNA 253
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G +++++CGRCG + +Y Q + D +T V C+NC W
Sbjct: 254 GTK-----TNLFKCGRCGKRETTYNQLQTRSADEPMTTFVYCMNCGNRW 297
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 36 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 95
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + A E + + R D N +S + +DS R
Sbjct: 96 TDKDPEEKKKDAAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVR 155
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D V I D ++ +E A+Y++ ++ YK + R
Sbjct: 156 LKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 207
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 208 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 266
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 267 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 312
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 23/289 (7%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 88 DVEYVAVTKKAKLVEN-----VKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFRE 139
+ KK + + + E ++ R D N +S + +DS R
Sbjct: 82 TDKDPEEKKKEPAISSQNSPEAREESSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVRL 141
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL + D D V I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 KCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSR 193
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAKT 252
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 GGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 297
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 30/293 (10%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ + ++
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL---LD 78
Query: 88 DVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKK------------SISCMIKCND 135
++ K + + E SGNV + S +D
Sbjct: 79 GPSTEKDPEEKKKEPAITSQNSPEAREESSSSGNVSNRKDETNARDTYVSSFPRAPSTSD 138
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S R RE L AL + D D V I D ++ +E A+Y++ ++ YK +
Sbjct: 139 SVRLKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNR 190
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 191 VRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQ 249
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 250 MAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 17/291 (5%)
Query: 25 VVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC 83
V E A +D L ++KN +T +LL +T++ + + K + +++ LA LI SW+ +
Sbjct: 20 VYEPAGALDLLKELKNIPMTLELLQTTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 79
Query: 84 ------WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSF 137
D E+ + + E + ++ R + G+ P S S
Sbjct: 80 DGPSTDKDSEEKKKEPASSSQNSPEAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPST 139
Query: 138 REIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYR 197
+ VR K + LS D + I D ++ +E A++++ ++ YK + R
Sbjct: 140 SDSVRVKCREMLSAALRTGDDYIAI----GADEEELGSQIEEAIFQELKNTDMKYKNRVR 195
Query: 198 CLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIF 257
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 196 SRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKE-AIREHQMA 254
Query: 258 PVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 255 KTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 301
>gi|297788910|ref|XP_002862485.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
gi|297308027|gb|EFH38743.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+FN+ D N D RR+VL G + PE +I +SA+EMASDK + N+H+ K+ AL
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNHI-KEKALFDCE---R 56
Query: 260 GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
GL+ K ++ ++CGRCG K + YQ + D +T +VTC+NC+ +W
Sbjct: 57 GLAAK-ASTEQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHW 104
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 135/296 (45%), Gaps = 27/296 (9%)
Query: 16 AVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ--KIQKLAY 73
+A + +G +++ +D L Q++ IT ++L T I + L+ SQ ++ LA
Sbjct: 13 GLAKMASDGSGGQSQALDMLKQLQRLPITLEILQKTH-IGLTVNTLRKSSQDDEVILLAK 71
Query: 74 DLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMI-K 132
L+ +W+ + + +++++ EN K VP K S
Sbjct: 72 TLVKNWKKLIGSTPTRAEDSSSRESR--ENKKSSTTPPARP-------VPAKQTSFPAGN 122
Query: 133 CNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
D+ R RE L +AL + D A DP ++A +ES ++++ ++ Y
Sbjct: 123 TTDAVRLKCREMLSNALK--GNGLPDGC------AADPDELAERIESTCFDEFNNTDTKY 174
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
+ + R + N+ DP+N + R VL+G +KPE + M+A+EMASD+++ L K+ +
Sbjct: 175 RSRIRSRVANLKDPKNPNLRLGVLIGSIKPERLAKMTAEEMASDELKQLRQKLTKEA--I 232
Query: 253 TGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
H + K +D+ +CG+C + +Y Q + D +T C C W
Sbjct: 233 DDHQMALTSGTK---TDLLKCGKCKKSNCTYNQVQTRSADEPMTTFAFCNECGNRW 285
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 23/289 (7%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 88 DVEYVAVTKKAKLVENVKV----EEVTNGE-ERRHDSGNVPKKSISCMIKC---NDSFRE 139
+ KK + + EE ++G R D N +S + +DS R
Sbjct: 82 TEKDPEEKKKEPAITSQNSPEAREESSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVRL 141
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL + D D V I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 KCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSR 193
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAKT 252
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 GGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 297
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQK-IQKLAYDLISSWRDMC-WDV 86
A +D L ++K+ +T +LL ST++ + + K ++ + LA LI SW+ +
Sbjct: 25 AGALDLLKELKSLPMTLELLQSTRIGMSVNAIRKQSGEEDVTSLAKSLIKSWKKLLDGPS 84
Query: 87 EDVEYVAVTKKAKLVENVKVEEVTNG--------EERRHDSGN-------VPKKSISCMI 131
D+E + A + + E ++ EE S + P S S I
Sbjct: 85 ADLEEKKKDQPAPAQNSPEAREESSSSTNFGVLKEECPAPSDDFITSFPRAPSTSDSVRI 144
Query: 132 KCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM 191
KC RE L AL D A +D ++ +E A+++++ ++
Sbjct: 145 KC--------RELLAVALKTGDDHVAIGADVD--------ELGAQIEEAVFQEFKNTDAK 188
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK + R + N+ D +N + RR VL G++ P+ MSA+EMASD+++ +L K+ A+
Sbjct: 189 YKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASDELKEMRKNLTKE-AI 247
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D++ CG+C +Y Q + D +T V C NC W
Sbjct: 248 REHQMARTGGTE----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVFCNNCGNRW 300
>gi|297823711|ref|XP_002879738.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
gi|297325577|gb|EFH55997.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+FN+ D N D RR+VL G + PE +I +SA+EMASDK + N+ + K+ AL
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNQI-KEKALFDCE---R 56
Query: 260 GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
GL+ K +D ++CGRCG K + YQ + D +T +VTC+NC+ +W
Sbjct: 57 GLAAK-ASTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHW 104
>gi|428183038|gb|EKX51897.1| hypothetical protein GUITHDRAFT_102510 [Guillardia theta CCMP2712]
Length = 298
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 133/310 (42%), Gaps = 31/310 (10%)
Query: 8 LCEAAKRAAVAAVWKEGV-VEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ 66
L E R A + K+GV V R D L + + + Q+L+ T++ + +
Sbjct: 6 LSEKEAREMKAKLEKDGVDVNTVR--DILTLLMDKEVPVQVLIETKIGVTVKSKRSDDDR 63
Query: 67 KIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKS 126
K+ KLA +L S W+++ A ++ E +NG+E+ V KK
Sbjct: 64 KVAKLASELTSKWKEVVARSRQPGSSAAGQEK--PNKSAAGEGSNGKEKVKSEDKVTKKP 121
Query: 127 ISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC 186
+ D R VRE A + E+ D ++ +ESAMYE +
Sbjct: 122 AEPV----DGKRLKVRELFEKAFADWKGESD----------VDRKDLSARIESAMYEHFG 167
Query: 187 RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMAS-DKIQLWNHHL 245
+N Y + + FN+SDP+N DFR KV+ G + E I +S+ +MA DKI+
Sbjct: 168 GANEQYLNHAKSVKFNLSDPKNPDFRSKVIFGDIDAEEIPKLSSGQMAGKDKIE--QKKA 225
Query: 246 DKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRH------- 297
+K+ + +F + SD+++C +C + + YQ + D +T
Sbjct: 226 NKEDKIFQDKMF-ITAGNLGAESDMFQCRKCKQKRTTFYQKQTRSADEPMTAELPLLQVF 284
Query: 298 VTCLNCNQYW 307
+TC NC W
Sbjct: 285 ITCKNCGHEW 294
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 135/293 (46%), Gaps = 24/293 (8%)
Query: 26 VEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC- 83
++A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 30 TQQAGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLD 89
Query: 84 -----WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---ND 135
D E+ + E + ++ R D N +S + +D
Sbjct: 90 GPSTDKDPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSD 149
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S R RE L AL + D D V I D ++ +E A+Y++ ++ YK +
Sbjct: 150 SVRLKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNR 201
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 202 VRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQ 260
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 261 MAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 309
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 135/290 (46%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 88 DVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---NDSFR 138
+ + KK + + + E ++G R D N +S + +DS R
Sbjct: 82 TEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EM SD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMPSDELKEMRKNLTKE-AIREHQMSK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + ++ R D N +S + +DS R
Sbjct: 82 TDKDPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D V I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLNGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + ++ R D N +S + +DS R
Sbjct: 82 TDKDPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D V I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + ++ R D N +S + +DS R
Sbjct: 82 TDKDSEEKKKEPAISSQNSPEAREESSSSSHVSSRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D V I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + + R D N +S + +DS R
Sbjct: 82 SDKDPEEKKKEPAITSQNSPEAKEESSSSGTISSRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|412992662|emb|CCO18642.1| predicted protein [Bathycoccus prasinos]
Length = 331
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 16/149 (10%)
Query: 168 CDPIQVAIL------VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVK 221
C+ I V L VE AM EKW YK K R L FN+ DP+N D RR + +
Sbjct: 187 CEDISVTSLARIVEEVEDAMSEKWKDLGKEYKAKLRQLAFNMKDPKNPDLRRAIAKREID 246
Query: 222 PETIINMSAKEMASDKIQLWNHHLDK--DGALVTGHIFPVGLSRKIIVSDIYECGRCGHN 279
T+I++S++E+ SD+ + N + + + V G RK + ++CG+CG
Sbjct: 247 ATTLIDLSSEELGSDERRAANQSIREHAEAEAVRGQ-------RKEASTTAFKCGKCGQR 299
Query: 280 KIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+ YQ + D +T VTC+NC W
Sbjct: 300 ACTFYQLQTRSADEPMTTFVTCVNCENRW 328
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + + R D N +S + +DS R
Sbjct: 82 TDKDPEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D V I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + + R D N +S + +DS R
Sbjct: 82 TDKDPEEKKKDTAITSQNSPEAREESSSSGNISSRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D V I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + + R D N +S + +DS R
Sbjct: 82 TDKDSEEKKKDTAVTSQNSPEAREESSSSGNMSSRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 23/287 (8%)
Query: 31 CIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQK-IQKLAYDLISSWRDMC-WDVED 88
+D L ++KN +T +LL ST++ + + K ++ + LA LI SW+ + D
Sbjct: 27 ALDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSGEEDVTSLAKALIKSWKKLLDGPSAD 86
Query: 89 VEYVAVTKKAKLVENVKVEE----VTNGEERRHDSGNVPKKSISCMIKC---NDSFREIV 141
+E + A + + +E TN ++ + I+ K +DS R
Sbjct: 87 MEEKKKDQPAPAQNSPEPKEENSSSTNFAAQKDEFPAPSDGFITSFPKAPITSDSVRIKC 146
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLF 201
RE L AL D A +D ++ +E A+++++ + YK + R +
Sbjct: 147 RELLAAALKTGDDHIAIGANVD--------ELGAQIEDAVFQEFKNTEAKYKNRIRSRIA 198
Query: 202 NISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGL 261
N+ D +N + RR VL G++ P+ M+A+EMASD+++ +L K+ A+ + G
Sbjct: 199 NLKDAKNPNLRRNVLCGNIAPDFFARMTAEEMASDELKEMRKNLTKE-AIREHQMAKTGG 257
Query: 262 SRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 258 TE----TDLFSCGKCKKKNCTYTQVQTRSADEPMTTFVFCNECGNRW 300
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 17/287 (5%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQK-IQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K S + LA LI SW+ +
Sbjct: 26 AGALDLLKELKNLPMTLELLQSTRIGMSVNAIRKQSSDDDVASLAKSLIKSWKKLLDGPS 85
Query: 88 D--VEYVAVTKKAKLVENVKVEEVTNGEER----RHDSGNVPKKSISCMIKCNDSFREIV 141
D + +N + R D VP ++ S + V
Sbjct: 86 DDKEPEEKKKEPLPPTQNSPEPREESSSSSNSSFRKDDCAVPPENFITSYPRAPSTSDSV 145
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLF 201
R K + LS D +TI D ++ +E A+++++ ++ YK + R +
Sbjct: 146 RIKCRELLSAALKTGDDYITI----GADDEELGAQIEEAVFQEFKNTDAKYKNRVRSRIA 201
Query: 202 NISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGL 261
N+ D +N + RR VL G++ P MSA+EMASD+++ +L K+ A+ + G
Sbjct: 202 NLKDGKNPNLRRNVLCGNISPIVFAKMSAEEMASDELKEMRKNLTKE-AIREHQMAKTGG 260
Query: 262 SRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 261 TE----TDLFSCGKCKMKNCTYTQVQTRSADEPMTTFVFCNTCGNRW 303
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 11 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 70
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + + R D N +S + +DS R
Sbjct: 71 TDKDPEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVR 130
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 131 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 182
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 183 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 241
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 242 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 287
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 33/294 (11%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ + D
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKL-LDGP 80
Query: 88 DVEYVAVTKKAKLVENVKVEEVTNGEER----------RHDSGNVPKKSISCMIKC---N 134
+ + KK ++ + + E R R D N +S + +
Sbjct: 81 STDKDSEEKK----KDTAITSQNSPEAREESSSGHGSSRKDEPNARDTYVSSFPRAPSTS 136
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
DS R RE L AL D + I D ++ +E A+Y++ ++ YK
Sbjct: 137 DSVRLKCREMLAAALRT----GEDYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKN 188
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+ R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 189 RVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREH 247
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 248 QMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 297
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 131/287 (45%), Gaps = 17/287 (5%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL +T++ + + K + +++ LA LI SW+ +
Sbjct: 24 AGALDLLKELKNIPMTLELLQTTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 83
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIV 141
D E+ + + E + ++ R + G+ P S S + V
Sbjct: 84 TDKDSEEKKKEPASSSQNSPEAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPSTSDSV 143
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLF 201
R K + LS D + I D ++ +E A++++ ++ YK + R +
Sbjct: 144 RVKCREMLSAALRTGDDYIAI----GADEEELGSQIEEAIFQELKNTDMKYKNRVRSRIA 199
Query: 202 NISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGL 261
N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ + G
Sbjct: 200 NLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKE-AIREHQMAKTGG 258
Query: 262 SRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 259 TQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 301
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 18/290 (6%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 1 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 60
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + ++ R D N +S + +DS R
Sbjct: 61 NDRDSEEKKKEPAITSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVR 120
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL D A + D + I+ IL + +Y++ ++ YK + R
Sbjct: 121 LKCREMLAAALRTGDDYVA--IGADEEELGSQIEEDILFQVPIYQEIRNTDMKYKNRVRS 178
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L ++ A+ +
Sbjct: 179 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTRE-AIREHQMAK 237
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 238 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 283
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 24/293 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 87 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 146
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + + R D N +S + +DS R
Sbjct: 147 TDKDPEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVR 206
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 207 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 258
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 259 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 317
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYWVST 310
G ++ +D++ CG+C +Y Q + D +T V C C W T
Sbjct: 318 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKDT 366
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 143/309 (46%), Gaps = 26/309 (8%)
Query: 12 AKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ-KIQK 70
AK+ A K GV +D L +++ +T +LL ST++ + + K + ++
Sbjct: 13 AKKMDKMAQKKSGVG----ALDLLKELRAVPMTLELLQSTRIGMSVNAIRKQSTDDEVTS 68
Query: 71 LAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGE-ERRHDSGN-------- 121
LA LI SW+ + + + K+ + + T G E R +S +
Sbjct: 69 LAKALIKSWKKLLDEPGGGDKSLEEKRKESSTPTSLVSPTQGSPEPREESNDSSSKNEPV 128
Query: 122 --VPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVES 179
+P S+ S + VR K + LS+ D + I CD Q+A +E
Sbjct: 129 DVMPSISLISTFPQAPSTSDSVRIKCREMLSQALQAGDDYIAIGA--DCD--QLAAQIEE 184
Query: 180 AMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
++ ++ ++ YK + R + N+ D +N + R+ VL G+V P+ + M+A+EMASD+++
Sbjct: 185 YIFCEFKNTDPKYKNRVRSRIANLKDIKNPNLRKSVLCGNVSPDRMAKMTAQEMASDELK 244
Query: 240 LWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHV 298
L +L K+ A+ + G ++ +D++ CG+C + +Y Q + D +T V
Sbjct: 245 LIRKNLTKE-AIRDHQVSQTGGTQ----TDLFTCGKCKKKRCTYTQVQTRSADEPMTTFV 299
Query: 299 TCLNCNQYW 307
C +C W
Sbjct: 300 FCNDCGNRW 308
>gi|384246149|gb|EIE19640.1| hypothetical protein COCSUDRAFT_25684 [Coccomyxa subellipsoidea
C-169]
Length = 127
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 189 NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKD 248
N YK KYR L+FN+ D N D RR+VL G + + ++N+SA+E+ASD + N + K
Sbjct: 9 NARYKAKYRSLIFNLKDANNPDLRRRVLSGEITGDVLVNLSAEELASDARKSENAQIRKT 68
Query: 249 GALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
AL G K +D ++CG+C K YQ + D +T VTC NC W
Sbjct: 69 -ALFEAE---RGQHMKKATTDQFQCGKCKQRKCQYYQMQTRSADEPMTTFVTCTNCGNRW 124
>gi|449494108|ref|XP_004175278.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Taeniopygia guttata]
Length = 267
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 124/273 (45%), Gaps = 17/273 (6%)
Query: 43 ITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC------WDVEDVEYVAVT 95
+T +LL ST++ + + K + +++ LA LI SW+ + D E+ + +
Sbjct: 1 MTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDSEEKKKEPAS 60
Query: 96 KKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDE 155
+ + ++ R + G+ P S S + VR K + LS
Sbjct: 61 SSQNSPDAREESSSSSNSSSRKEEGSAPSNSFIPSFPRAPSTSDSVRVKCREMLSAALRT 120
Query: 156 AADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKV 215
D + I D ++ L+E A++++ ++ YK + R + N+ D +N + R+ V
Sbjct: 121 GDDYIAI----GADEEELGSLIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNV 176
Query: 216 LLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGR 275
L G++ P+ M+A+EMASD+++ +L K+ A+ + G ++ +D++ CG+
Sbjct: 177 LCGNIPPDKFAKMTAEEMASDELKEMRKNLTKE-AIREHQMAKTGGTQ----TDLFTCGK 231
Query: 276 CGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
C +Y Q + D +T V C C W
Sbjct: 232 CKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 264
>gi|22327517|ref|NP_680377.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|332007413|gb|AED94796.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 233
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 109/240 (45%), Gaps = 43/240 (17%)
Query: 3 KKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNS--SITYQLLVSTQVIRHLLPM 60
++ ++L EAA RAA + E E R +DA++++K + S+ ++ T + + L
Sbjct: 4 REFLELFEAALRAAKSVKGAESSPEVLRFVDAMNRLKEAPKSLVCDVVCKTSMGKGLGFF 63
Query: 61 LKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSG 120
+ H + KI+ L W +K+ + E+ R
Sbjct: 64 IDHKNPKIRSEGRILRDLW------------------------MKIHYASGREKSRDRET 99
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAAD-KVTIDLVKACDPIQVAILVES 179
V + S M K DS R+ V E L +L+KV+ E D ++ ++ CDP VA+ VES
Sbjct: 100 PVKIPTHSTMKKTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCDPWVVAVSVES 159
Query: 180 AMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
AM +LFN+ D N D RRKVL+G + E ++ M EM S+KIQ
Sbjct: 160 AM----------------SILFNMGDSNNPDLRRKVLIGEISGERLVKMEKDEMGSEKIQ 203
>gi|353234293|emb|CCA66319.1| related to transcription elongation factor TFIIS [Piriformospora
indica DSM 11827]
Length = 280
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 34/291 (11%)
Query: 22 KEGVVEEARCIDALDQIKNSSI-TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWR 80
++ +++ A + L ++K S + T + L T+V + + +H S ++ LA +++ W+
Sbjct: 16 QKAIMQPADLVGLLKKLKQSVVPTEETLRDTKVGLTVGRLRQHESTEVSDLAKEIVKRWK 75
Query: 81 DMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREI 140
+ + + A+T A + + + + DS D R+
Sbjct: 76 SEVDEEKKRKVSALTAAASTSKKPTGPRSVDADGVKFDS-------------LGDKTRDS 122
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE--KWCRSNGMYKFKYRC 198
R +Y+AL D A I ++ AI VE A + SN Y+ K R
Sbjct: 123 TRPLIYNAL--CIDSGAPSELI--------LKRAIAVEEAAFTICGKGESNSDYRNKMRS 172
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIF- 257
L N+ EN R+ V+ G + E ++ MS+ +MAS+ KD A+ ++F
Sbjct: 173 LFLNLKGKENPSLRQGVVSGDISAEKLVTMSSSDMASE------ERKQKDKAIEEENLFK 226
Query: 258 PVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+G + +D ++CG+C K Y+ + D +T VTC+NC W
Sbjct: 227 SLGAGEQQAETDAFQCGKCKQRKTIYRQAQTRSADEPMTTFVTCVNCGNRW 277
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 135/293 (46%), Gaps = 24/293 (8%)
Query: 26 VEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC- 83
+ +A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 67 LPKAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLD 126
Query: 84 -----WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---ND 135
D ++ + + E + ++ R + N I + +D
Sbjct: 127 GPSTDKDSDEKKKESAISSQNSPEAKEESSSSSNASNRKEETNASDSFIPSFPRAPSTSD 186
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S R RE L AL + D D + I D ++ +E A+Y++ ++ YK +
Sbjct: 187 SVRMKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQELRNTDMKYKNR 238
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 239 VRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQ 297
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 298 MAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 346
>gi|388501372|gb|AFK38752.1| unknown [Medicago truncatula]
Length = 204
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 5 VMDLCEAAKRAAVAAVWKEGV-VEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKH 63
+++L EAAK+AA A+ + EE RC+DAL+Q+KN + Y++LV+TQV +HL + KH
Sbjct: 9 LVELYEAAKKAADASTSTDNSPSEETRCLDALEQLKNFPVNYKILVNTQVGKHLKTLTKH 68
Query: 64 PSQKIQKLAYDLISSWRDMC-------------WDVEDV--EYVAVTK-------KAKLV 101
P + I+ A DLI+ W+D+ VE E K K +
Sbjct: 69 PRENIRAFAVDLIAIWKDVIIKETSKNKNGASDSKVESTNGERAKAGKLQKSPSVKVEKG 128
Query: 102 ENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREI--VREKLYDALSKVSDEAA 157
E+ KVE+V + SGNV +++ I+ D I EK A K+S AA
Sbjct: 129 ESAKVEKVNGNGSSKLSSGNVKAQNVDVKIEKTDRTSNIKAKEEKPVSAAKKISSSAA 186
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 123/279 (44%), Gaps = 13/279 (4%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 86
Query: 91 YVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDAL 149
+ L + + E + +R + P + VR K + L
Sbjct: 87 ARERGRGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREML 146
Query: 150 SKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQ 209
+ A D V I D +++ +E ++ ++ YK + R + N+ D +N
Sbjct: 147 TAALQTAHDHVAI----GADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNP 202
Query: 210 DFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSD 269
D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++ +D
Sbjct: 203 DLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ----TD 257
Query: 270 IYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ CG+C +Y Q + D +T V C C W
Sbjct: 258 LFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 23/284 (8%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 1 MDLLRELKAMPITLHLLQSTRVGMSVNTLRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 59
Query: 91 YVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKS-----ISCMIKCNDSFREIVREK 144
+ L + + E + +R + P + C D+ R RE
Sbjct: 60 ARERGRGMPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREM 118
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
L AL D A D ++++ +E ++ ++ YK + R + N+
Sbjct: 119 LTAALQTDHDHVA--------IGADCVRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLK 170
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++
Sbjct: 171 DAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ- 228
Query: 265 IIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+D++ CG+C +Y Q + D +T V C C W
Sbjct: 229 ---TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 269
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 13/279 (4%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 86
Query: 91 YVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDAL 149
+ L + + E + +R + P + VR K + L
Sbjct: 87 ARERGRGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREML 146
Query: 150 SKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQ 209
+ A D V I D +++ +E ++ ++ YK + R + N+ D N
Sbjct: 147 TAALQTAHDHVAI----GADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDARNP 202
Query: 210 DFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSD 269
D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++ +D
Sbjct: 203 DLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ----TD 257
Query: 270 IYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ CG+C +Y Q + D +T V C C W
Sbjct: 258 LFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|392584823|gb|EIW74165.1| transcription elongation factor [Coniophora puteana RWD-64-598 SS2]
Length = 294
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 16/175 (9%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
D+ R+ E +YD L+ S +D++ A VE+A++ ++ ++ YK
Sbjct: 132 GDNTRDKCSELMYDGLASDSGAPSDQI----------ASKAAAVETAVFNQFGSTSAEYK 181
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
K R L N+ D N R ++ G + P MS+ EMAS++ + + L ++ +
Sbjct: 182 SKIRSLFVNLKDKNNPSLRETIVSGDLSPSKFATMSSSEMASEERRAADKRLQEENFFKS 241
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+ + + +D ++CGRC K Y+ + D +T VTC NC W
Sbjct: 242 -----LAAAEQEAETDGFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTNCGNRW 291
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 132/290 (45%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D ++ + E + ++ R + N I + +DS R
Sbjct: 82 TDKDSDEKKKEPAISSQNSPEAKEESSSSSNASNRKEETNASDSFIPSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 MKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQELRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 13/279 (4%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 4 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 62
Query: 91 YVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDAL 149
+ L + + E + +R + P + VR K + L
Sbjct: 63 ARERGRGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREML 122
Query: 150 SKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQ 209
+ A D V I D +++ +E ++ ++ YK + R + N+ D N
Sbjct: 123 TAALQTAHDHVAI----GADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDARNP 178
Query: 210 DFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSD 269
D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++ +D
Sbjct: 179 DLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ----TD 233
Query: 270 IYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ CG+C +Y Q + D +T V C C W
Sbjct: 234 LFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 272
>gi|345566736|gb|EGX49678.1| hypothetical protein AOL_s00078g167 [Arthrobotrys oligospora ATCC
24927]
Length = 316
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 118/292 (40%), Gaps = 49/292 (16%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T Q+L T++ + + H + + +LA D+++ W+ DV + AK
Sbjct: 43 TEQILRETKIGMIVNKLRGHADKTVSELAKDIVNKWKK---DVSMKPKSGSSSDAKGGVA 99
Query: 104 VKVEEVTNGEERRHDSGN-------VPKKS----------------ISCMIKCNDSFREI 140
+K E TNG D+ N VP+K+ + C I D R
Sbjct: 100 MKKEASTNGGTSGKDTPNKSTPTPSVPRKTGGSSVDPMKRSHKTDGVECNIFGGDEVRTK 159
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEK-WCRSNGMYKFKYRCL 199
+YD L V L D ++A E +Y +++ Y+ K R L
Sbjct: 160 SLAMIYDGL----------VIGALATPDDVFKLAKDTEHNLYRNHGSKTDTAYRNKLRSL 209
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDG---ALVTGHI 256
FN+ DP+N R V+ G ++P + MS++EMAS + + + ++++ A+V
Sbjct: 210 FFNLKDPKNPSLRNNVISGRIEPMRLALMSSEEMASAERKREDEKIEQENMKEAMVA--- 266
Query: 257 FPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
V+D CG+CG +SY + D +T CL C W
Sbjct: 267 -----KAPTSVTDQLRCGKCGKRNVSYSQAQTRSADEPMTTFCECLQCGNRW 313
>gi|440804552|gb|ELR25429.1| transcription elongation factor SII, hS-II-T1 isoform 8, putative
[Acanthamoeba castellanii str. Neff]
Length = 188
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 18/178 (10%)
Query: 131 IKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNG 190
IK ND+ R+ E L +AL + +A D ++A+ +E+ M++ + +N
Sbjct: 26 IKLNDATRQKCFEMLAEALEQSESDA------------DYFELALDIEAEMFKLFGETNP 73
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGA 250
YK K+R L N+ + +N D R VL GH+ PE + M+++E+AS ++Q L+ +
Sbjct: 74 NYKAKFRQLFMNLKNVKNHDLRLGVLNGHISPERLCQMTSQELASKELQEQRKALE-EAC 132
Query: 251 LVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
L + +K ++++ C +C + + YQ + D +T V C NCN W
Sbjct: 133 LKEA----IRGGQKQATTNMFRCHKCKKRECTYYQLQTRSADEPMTTFVQCTNCNNRW 186
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 24/292 (8%)
Query: 24 GVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDM 82
G ++E +D L ++K IT LL ST+V + + K S +++ LA LI SW+ +
Sbjct: 28 GCLQEG-AMDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL 86
Query: 83 CWDVEDVEYVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKS-----ISCMIKCNDS 136
D D + + L + + E + +R + P + C D+
Sbjct: 87 -LDASDAKARERGRGTPLPTSSRDASEAQDPSRKRPELPRAPSTPRITTFPPVPVTC-DA 144
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKY 196
R+ RE L AL D A D +++ +E ++ ++ YK +
Sbjct: 145 VRDKCREMLTAALQTDHDHVA--------IGADCKRLSAQIEECIFRDVGNTDMKYKNRV 196
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI 256
R + N+ D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ +
Sbjct: 197 RSRISNLKDAKNPDLRRNVLCGAITPQRIAVMTSEEMASDELKEIRKAMTKE-AIREHQM 255
Query: 257 FPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 256 ARTGGTQ----TDLFTCGKCRKKSCTYTQVQTRSSDEPMTTFVVCNECGNRW 303
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 30/293 (10%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++++ +T +LL ST++ + + K + +++ LA LI SW+ + + E
Sbjct: 29 LDLLKELRSVPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDEPGSGE 88
Query: 91 YVAVTKKAKLVENV--KVEEVTNGEERRHDSGNVPKKS-------------ISCMIKCND 135
+ K+ + + +E + E S N +S +D
Sbjct: 89 KTSEEKRKEQSTPIISSSQESPDAREESCSSSNTNSRSEPLDDTPGSFVNAFPRAASTSD 148
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
R RE L +AL D I + CD ++ +E +++++ ++ YK +
Sbjct: 149 PIRVKCREMLANALQTGDD------YIAIGADCD--ELGAQIEDFIFQEFKNTDMKYKNR 200
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + RR VL G + PE + M+A+EMASD+++ +L K+ A+
Sbjct: 201 VRSRISNLKDVKNPNLRRTVLCGSITPERMAKMTAEEMASDELKEIRKNLTKE-AVRDHQ 259
Query: 256 IFPVGLSRKIIVSDIYECGRC-GHNKISYQHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C G N Q + D +T V C C W
Sbjct: 260 MATTGGTQ----TDLFTCGKCKGKNCTYTQVQTRSADEPMTTFVFCNGCGNRW 308
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 128/287 (44%), Gaps = 17/287 (5%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 11 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 70
Query: 88 DVEYVAVTKKAKLVEN------VKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIV 141
+ KK V + + ++ R D N S S + V
Sbjct: 71 TEKESEEKKKEPSVSSQNSPEAREESSSSSHTSNRKDEANASSDSFIPSFPRAPSTSDSV 130
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLF 201
R K + L+ D + I D ++ +E A+Y++ ++ YK + R +
Sbjct: 131 RVKCREMLAAALKTGDDYIAI----GADDEELGSQIEEAIYQELRNTDMKYKNRVRSRIA 186
Query: 202 NISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGL 261
N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ + G
Sbjct: 187 NLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAKTGG 245
Query: 262 SRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 246 TQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 288
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 135/290 (46%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 88 DVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---NDSFR 138
+ + KK + + + E ++G R D N +S + +DS +
Sbjct: 82 TEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVQ 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPYLRKNVLCGNIPPDLFARMTAEEMASDELKEMWKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPVTTFVVCNECGNRW 298
>gi|190345115|gb|EDK36938.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMY-EKWCRSNGMYK 193
DS R LY AL+ D+ ++K+ + VA +E ++ +++ N Y+
Sbjct: 51 DSTRNASVSALYTALAIERDDPSEKI----------LDVARNIELGVFKQEYSAVNDAYR 100
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
K R L N+ + +N D R ++L G + P I M+ EMA + ++ L+K
Sbjct: 101 NKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNPNEMAPESLKQEIEKLNKQ----- 155
Query: 254 GHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
++F G + K V+D + CG+C H K+S YQ + D LT TC NC W
Sbjct: 156 -NLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRW 210
>gi|146423462|ref|XP_001487659.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMY-EKWCRSNGMYK 193
DS R LY AL+ D+ ++K+ + VA +E ++ +++ N Y+
Sbjct: 51 DSTRNASVSALYTALAIERDDPSEKI----------LDVARNIELGVFKQEYSAVNDAYR 100
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
K R L N+ + +N D R ++L G + P I M+ EMA + ++ L+K
Sbjct: 101 NKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMNPNEMAPESLKQEIEKLNKQ----- 155
Query: 254 GHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
++F G + K V+D + CG+C H K+S YQ + D LT TC NC W
Sbjct: 156 -NLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRW 210
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 127/267 (47%), Gaps = 23/267 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 1 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 60
Query: 88 DVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---NDSFR 138
+ + KK + + + E ++G R D N +S + +DS R
Sbjct: 61 TEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSVR 120
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 121 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 172
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 173 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 231
Query: 259 VGLSRKIIVSDIYECGRCGHNKISYQH 285
G ++ +D++ CG+C +Y
Sbjct: 232 TGGTQ----TDLFTCGKCKKKNCTYTQ 254
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 31/288 (10%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 86
Query: 91 YVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKS---------ISCMIKCNDSFREI 140
+ L + + E + +R + P ++C D+ R
Sbjct: 87 ARERGRGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-----DAVRNK 141
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL 200
RE L AL D A + C+ +++ +E ++ ++ YK + R +
Sbjct: 142 CREMLTAALQTDHDHVA------IGADCE--RLSAQIEECIFRDVGNTDMKYKNRVRSRI 193
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVG 260
N+ D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G
Sbjct: 194 SNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTG 252
Query: 261 LSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 GTQ----TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 125/288 (43%), Gaps = 31/288 (10%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 86
Query: 91 YVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKS---------ISCMIKCNDSFREI 140
+ L + + E + +R + P ++C D+ R
Sbjct: 87 ARERGRGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-----DAVRNK 141
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL 200
RE L AL D A D +++ +E ++ ++ YK + R +
Sbjct: 142 CREMLTAALQTDHDHVA--------IGADCQRLSAQIEECIFRDVGNTDMKYKNRVRSRI 193
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVG 260
N+ D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G
Sbjct: 194 SNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTG 252
Query: 261 LSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 GTQ----TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 134/290 (46%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDV- 86
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 87 ------EDVEYVAVTKKAKLVENVKVEEVTNGEERRH--DSGNVPKKSISCMIKCNDSFR 138
E + A++ + + +N R+ D+ + S +DS R
Sbjct: 82 TDKDSDEKKKEPAISSQNSPEAKEESSSSSNASNRKEETDASDSFIPSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 MKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQELRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEIRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 32/289 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K +T LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 28 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKL-LDASDAK 86
Query: 91 YVAVTKKAKLVENVKVE--EVTNGEERRHDSGNVPKKS---------ISCMIKCNDSFRE 139
+ L + E E + +R + +P ++C D+ R
Sbjct: 87 ARERRRGGSLPTSSSKEASEAQDPSRKRPELPRMPSTPRITTFPPVPVTC-----DAVRT 141
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL +D D V I C +A +E ++ ++ YK + R
Sbjct: 142 KCREMLTAALQ--TDH--DHVAIGADCEC----LAGQIEECIFRDVGNTDMKYKNRVRSR 193
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
L N+ D +N RRKVL G + P+ I M+++EMASD+++ + K+ A+ +
Sbjct: 194 LSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMART 252
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 GGTQ----TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 297
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 132/290 (45%), Gaps = 24/290 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D ++ + E + ++ R + N I + +DS R
Sbjct: 82 TDKDSDEKKKEPAISSQNSPEAKEESSSSSNASNRKEETNASDSFIPSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 MKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQELRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ ++A+EMASD+++ +L K+ A+ +
Sbjct: 194 RIANLKDAKNPNLRKNVLCGNIPPDLFARLTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|114620135|ref|XP_001151569.1| PREDICTED: transcription elongation factor A protein 1 isoform 3
[Pan troglodytes]
gi|397505491|ref|XP_003823294.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Pan paniscus]
gi|410212654|gb|JAA03546.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251520|gb|JAA13727.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298810|gb|JAA28005.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341537|gb|JAA39715.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 280
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 30/293 (10%)
Query: 25 VVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCW 84
VV A+ +D + Q KN+S ++ +S IR + +++ LA LI SW+ +
Sbjct: 5 VVRFAKKMDKMVQKKNAST--RIGMSVNAIRK-----QSTDEEVTSLAKSLIKSWKKLLD 57
Query: 85 DVEDVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---ND 135
+ + KK + + + E ++G R D N +S + +D
Sbjct: 58 GPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD 117
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S R RE L AL + D D + I D ++ +E A+Y++ ++ YK +
Sbjct: 118 SVRLKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEMRNTDMKYKNR 169
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 170 VRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQ 228
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 229 MAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 277
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 31/288 (10%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 86
Query: 91 YVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKS---------ISCMIKCNDSFREI 140
+ L + + E + +R + P ++C D+ R
Sbjct: 87 ARERGRGMPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-----DAVRNK 141
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL 200
RE L AL D A + C+ +++ +E ++ ++ YK + R +
Sbjct: 142 CREMLTAALQTDHDHVA------IGADCE--RLSAQIEECIFRDVGNTDMKYKNRVRSRI 193
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVG 260
N+ D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G
Sbjct: 194 SNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTG 252
Query: 261 LSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 GTQ----TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 23/284 (8%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 86
Query: 91 YVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKS-----ISCMIKCNDSFREIVREK 144
+ L + + E + +R + P + C D+ R RE
Sbjct: 87 ARERGRGMPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREM 145
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
L AL D A + C+ +++ +E ++ ++ YK + R + N+
Sbjct: 146 LTAALQTDHDHVA------IGADCE--RLSAQIEECIFRDVGNTDMKYKNRVRSRISNLK 197
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++
Sbjct: 198 DAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ- 255
Query: 265 IIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+D++ CG+C +Y Q + D +T V C C W
Sbjct: 256 ---TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|308510188|ref|XP_003117277.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
gi|308242191|gb|EFO86143.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
Length = 308
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 29/303 (9%)
Query: 20 VWKEGVVEEARCIDALDQIKNSSITYQLLVSTQV-IRHLLPMLKHPSQKIQKLAYDLISS 78
+ K G+ + CI LD + +T +++ T + I+ + K P + + K ++I
Sbjct: 17 ICKNGMGSKDECIKLLDDLAKFQMTVEIIQQTSIGIKVNMMRKKVPDESLAKRTKNIIKE 76
Query: 79 WRDM----CWDVEDVEYVAVTKKAK-LVENVKVEEVT-NGEERRHDSGNVPK-----KSI 127
W+++ +D + A K+ K VE KVE+ +R +S N P+ S
Sbjct: 77 WKNIVDSKSKSQDDSDAPAPKKQRKESVEEPKVEKKKIEAPYKRQESNNRPEIVAQFASA 136
Query: 128 SCMIKC--NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW 185
S K ND R + L AL + DP ++A+ +E +Y
Sbjct: 137 SFPPKHLENDETRLKSAQLLLSAL---------RFGEMPQGTLDPEELAVQIEEKLYSVH 187
Query: 186 CRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHL 245
+N Y R +FN+ D +N R VL G V+ E M+++EMAS +I+
Sbjct: 188 RDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSEEMASPEIRNMRDKF 247
Query: 246 DKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCN 304
K+ L H V ++ SD+++CG+CG +Y Q + D +T V CL C
Sbjct: 248 TKEAIL--EHQMSV---QQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFVFCLECG 302
Query: 305 QYW 307
W
Sbjct: 303 NRW 305
>gi|344232834|gb|EGV64707.1| transcription elongation factor [Candida tenuis ATCC 10573]
Length = 286
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 36/274 (13%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T +LL T+V + + +I + +I +WRDM V K K
Sbjct: 36 TEKLLRETKVGVAVNKYRSSTNSEISSIVKKMIRNWRDM---------VQAEKNKKKGPT 86
Query: 104 VKVEEVTNG------EERRHDSGNVPK-KSISCMIKCNDSFREIVREKLYDALSKVSDEA 156
V+ T+G E + H PK IS I +DS R LY AL+ ++
Sbjct: 87 SDVKAATSGSSTPSKENKFHSGPRNPKIDGISTDI-YDDSTRNASISALYTALAIERGDS 145
Query: 157 ADKVTIDLVKACDPIQVAILVESAMY-EKWCRSNGMYKFKYRCLLFNISDPENQDFRRKV 215
+ ++ + VA +E+ ++ +++ + Y+ K R + N+ + +N + R ++
Sbjct: 146 SQQI----------LSVAKSIEAEVFKDEYSKVADGYRNKLRTFVMNLRNKKNPELRDRI 195
Query: 216 LLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECG 274
L G + P + MS EMA + ++ L K ++F G + K V+D + CG
Sbjct: 196 LSGQITPGKFVKMSPNEMAPETLKKEIEKLHKQ------NLFDAQGATEKRAVTDRFTCG 249
Query: 275 RCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+C H K+S YQ + D LT TC NC W
Sbjct: 250 KCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRW 283
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 23/284 (8%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 1 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 59
Query: 91 YVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKS-----ISCMIKCNDSFREIVREK 144
+ L + + E + +R + P + C D+ R RE
Sbjct: 60 ARERGRGMPLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREM 118
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
L AL D A + C+ +++ +E ++ ++ YK + R + N+
Sbjct: 119 LTAALQTDHDHVA------IGADCE--RLSAQIEECIFRDVGNTDMKYKNRVRSRISNLK 170
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++
Sbjct: 171 DAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ- 228
Query: 265 IIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+D++ CG+C +Y Q + D +T V C C W
Sbjct: 229 ---TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 269
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 23/284 (8%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 86
Query: 91 YVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKS-----ISCMIKCNDSFREIVREK 144
+ L + + E + +R + P + C D+ R RE
Sbjct: 87 VRERGRSTPLPTSSRDASEAQDPSRKRPELPRTPSTPRITTFPPVPVTC-DAVRNKCREM 145
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
L AL D A D +++ +E ++ ++ YK + R + N+
Sbjct: 146 LAIALQTDHDHVA--------IGADCKRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLK 197
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++
Sbjct: 198 DAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ- 255
Query: 265 IIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+D++ CG+C +Y Q + D +T V C C W
Sbjct: 256 ---TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 32/289 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K +T LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 28 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 86
Query: 91 YVAVTKKAKLVENVKVE--EVTNGEERRHDSGNVPKKS---------ISCMIKCNDSFRE 139
+ L + E E + +R + +P ++C D+ R
Sbjct: 87 AREQRRGGPLPTSSSKEAAEAKDSSRKRPELPRMPSAPRITTFPPVPVTC-----DAVRN 141
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL D A V D C+ + I E ++ ++ Y+ + R
Sbjct: 142 KCREMLTAALQTDRDHMA--VGAD----CEGLSAQI--EECIFRDVGNTDMKYRNRVRSR 193
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ +
Sbjct: 194 ISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMART 252
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 253 GGTQ----TDLFTCGKCRRKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 297
>gi|50552628|ref|XP_503724.1| YALI0E09196p [Yarrowia lipolytica]
gi|49649593|emb|CAG79314.1| YALI0E09196p [Yarrowia lipolytica CLIB122]
Length = 295
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+ +Y+ + G Y+ K R L N+ DP+N R V+ G + E + MS +EM
Sbjct: 163 AKAIENEVYKMENGTGGNYRPKMRSLYINLKDPKNPGLRGNVISGKISAERLCRMSPQEM 222
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDD 291
ASD+++ ++K ++F G + + V+D + CG+C K+S YQ + D
Sbjct: 223 ASDELKKEIEEMEKQ------NLFAARGATEQRAVTDRFTCGKCKQKKVSYYQMQTRSAD 276
Query: 292 YNLTRHVTCLNCNQYW 307
LT TC NC W
Sbjct: 277 EPLTTFCTCENCGTRW 292
>gi|45439355|ref|NP_958845.1| transcription elongation factor A protein 1 isoform 2 [Homo
sapiens]
gi|332213783|ref|XP_003256010.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Nomascus leucogenys]
gi|426359605|ref|XP_004047058.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|37072|emb|CAA40484.1| transcription elongation factor [Homo sapiens]
Length = 280
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 30/293 (10%)
Query: 25 VVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCW 84
VV A+ +D + Q KN+S ++ +S IR + +++ LA LI SW+ +
Sbjct: 5 VVRFAKKMDKMVQKKNAST--RIGMSVNAIRK-----QSTDEEVTSLAKSLIKSWKKLLD 57
Query: 85 DVEDVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---ND 135
+ + KK + + + E ++G R D N +S + +D
Sbjct: 58 GPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD 117
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S R RE L AL + D D + I D ++ +E A+Y++ ++ YK +
Sbjct: 118 SVRLKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNR 169
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 170 VRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQ 228
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 229 MAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 277
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 132/297 (44%), Gaps = 26/297 (8%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+ + DV D +
Sbjct: 28 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDVSDAK 86
Query: 91 YVAVTKKAKLVENV--KVEEVTNGEERRHDSGNVPKKS-----ISCMIKCNDSFREIVRE 143
+ L + E + +R + +P I CN + R RE
Sbjct: 87 TRDRGRDTALPTSSTKNASEAMDPSRKRLELPRMPSTPRITTFPPVPITCN-AVRNKCRE 145
Query: 144 KLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNI 203
L AL D A V D C+ +++ +E ++ ++ YK + R + N+
Sbjct: 146 MLTTALQTDHDHVA--VGAD----CE--RLSAQIEECIFRDVGNTDMKYKNRVRSRISNL 197
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSR 263
D +N + RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++
Sbjct: 198 KDAKNPELRRNVLCGTITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ 256
Query: 264 KIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYWVSTNLSFGVLPI 319
+D++ CG+C +Y Q + D +T V C C W FG PI
Sbjct: 257 ----TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW-KAQAGFGT-PI 307
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 126/289 (43%), Gaps = 32/289 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K +T LL ST+V + + K S + + LA LI SW+ + D D +
Sbjct: 36 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEGVIALAKSLIKSWKKL-LDASDAK 94
Query: 91 YVAVTKKAKLVENVKVE--EVTNGEERRHDSGNVPKKS---------ISCMIKCNDSFRE 139
+ L + E E + +R + +P ++C D+ R
Sbjct: 95 AREQRRGGPLPASSSKESPEAQDPSRKRPELPRMPSAPRITTFPPVPVTC-----DAVRN 149
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL D A V D C+ + I E ++ ++ YK + R
Sbjct: 150 KCRELLTAALQTDHDHMA--VGAD----CEGLSAQI--EECIFRDVGNTDMKYKNRVRSR 201
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ +
Sbjct: 202 ISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMART 260
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 261 GGTQ----TDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 305
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 23/290 (7%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + ++ R D N +S + +DS R
Sbjct: 82 TDKDPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL D A + A + + + E +Y++ ++ YK + R
Sbjct: 142 LKCREMLAAALRTGDDYVA-------IGADEEELGSQIEEVPIYQEIRNTDMKYKNRVRS 194
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 195 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 253
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 254 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 299
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 34/323 (10%)
Query: 2 EKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPML 61
+K+ D+ AK+ A K G A +D L ++++ +T +LL ST++ + +
Sbjct: 3 KKEEEDIIRIAKKIDKMAQKKNG----AGALDLLKELRSIPMTLELLQSTRIGMSVNAIR 58
Query: 62 KHPS-QKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDS- 119
K + +++ LA LI SW+ + + E + K+ + V + E R
Sbjct: 59 KQSTDEEVTSLAKSLIKSWKKLLDEPGGGEKTSEEKRKEQSTPVISSSQESPEAREESCS 118
Query: 120 -----------GNVPKKSISCMIKC---NDSFREIVREKLYDALSKVSDEAADKVTIDLV 165
+ P ++ + +D R RE L +AL D I +
Sbjct: 119 SSNNNSRSEPSDDTPSSFVNTFPRAASTSDPIRVKCREMLANALQTGDD------YIAIG 172
Query: 166 KACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETI 225
CD ++ +E +++ + ++ YK + R + N+ D +N + RR VL G + PE +
Sbjct: 173 ADCD--ELGAQIEDFIFQVFKNTDMKYKNRVRSRISNLKDVKNPNLRRTVLCGSITPERM 230
Query: 226 INMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRC-GHNKISYQ 284
M+A+EMASD+++ +L K+ A+ + G ++ +D++ CG+C G N Q
Sbjct: 231 AKMTAEEMASDELKEIRKNLTKE-AVRDHQMATTGGTQ----TDLFTCGKCKGKNCTYTQ 285
Query: 285 HSSILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 286 VQTRSADEPMTTFVFCSGCGNRW 308
>gi|225716628|gb|ACO14160.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 181
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
+DS R RE L AL +A D I + CD ++ +E +++ ++ ++ YK
Sbjct: 17 SDSVRMKCREMLSQAL-----QAGDDY-IAIGADCD--ELGAQIEESIFSEFQNTDPKYK 68
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ D +N + RR VL G+V P+ + M+A+EMASD+++L +L K+ A+
Sbjct: 69 NRVRSRIANLKDIKNPNLRRNVLCGNVAPDRMAKMTAEEMASDELKLIRKNLTKE-AIRD 127
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C + +Y Q + D +T V C+ C W
Sbjct: 128 HQVSQTGGTQ----TDLFTCGKCKKKRCTYTQVQTRSADEPMTTFVFCMECGNRW 178
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 131/291 (45%), Gaps = 19/291 (6%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 67 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 126
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + + R + N +S + +DS R
Sbjct: 127 TDKDPEEKKKDTAVTSQNSPEAREESSSSGNISSRKEEANARDTYVSSFPRAPSTSDSVR 186
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAIL-VESAMYEKWCRSNGMYKFKYR 197
RE L AL D A + D + I+ IL V +Y++ ++ YK + R
Sbjct: 187 LKCREMLAAALRTGDDYVA--IGADEEELGSQIEEDILSVLVPIYQEIRNTDMKYKNRVR 244
Query: 198 CLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIF 257
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 245 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMA 303
Query: 258 PVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 304 KTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 350
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 40/289 (13%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE--- 87
+D L ++KN +IT +LL ST+V + + K + +I ++ LI SW+ + E
Sbjct: 28 LDLLRELKNMAITLELLQSTRVGMSVNALRKQSNDNEIITISKSLIKSWKKLLDGSEQPG 87
Query: 88 -DVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIK-------CNDSFRE 139
+ T +L + K+E VPK I+ + +DS R
Sbjct: 88 KEKPQTIPTCSKELGSSKKIE--------------VPKTPITPKMTRFPPLPVTSDSVRT 133
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL D A + + A +E ++ + ++ YK + R
Sbjct: 134 KCREMLRAALQTDGDHVAIGADCEFL--------AAQIEEVVFGEMQNTDMKYKNRIRSR 185
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N D R+ VL G + PE I MS +EMAS++++ + K A+ +
Sbjct: 186 ISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEEMASNELKEMRKAMTK-AAIQEHQMAKT 244
Query: 260 GLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y I D +T V C C W
Sbjct: 245 GGTQ----TDLFTCGKCKKKNCTYTQVQIRSADEPMTTFVACNECGNRW 289
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 23/290 (7%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + ++ R D N +S + +DS R
Sbjct: 82 TDKDSEEKKKEPAISSQNSPEAREESSSSSHVSSRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL D A + A + + + E +Y++ ++ YK + R
Sbjct: 142 LKCREMLAAALRTGDDYVA-------IGADEEELGSQIEEVPIYQEIRNTDMKYKNRVRS 194
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 195 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 253
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 254 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 299
>gi|150864771|ref|XP_001383742.2| hypothetical protein PICST_57286 [Scheffersomyces stipitis CBS
6054]
gi|149386027|gb|ABN65713.2| transcription elongation factor S-IIMeiotic DNA recombination
factor (STP-alpha) [Scheffersomyces stipitis CBS 6054]
Length = 294
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 24/270 (8%)
Query: 46 QLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVT--KKAKLVEN 103
+LL T+V + H + I L +I +W++ + ++ + + +
Sbjct: 38 KLLRETKVGVAVNKYRSHSNSDINSLVKKMIRTWKESVQNEKNSKKKTASPVSNGNAASS 97
Query: 104 VKVE---EVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKV 160
VK E E + + H PK ++S R LY AL+ D+ + +
Sbjct: 98 VKEEVKSEAGSTNSKFHQGPRNPKTDGVNTTLYDNSTRNASVSALYTALAIERDDRSSHI 157
Query: 161 TIDLVKACDPIQVAILVESAMYE-KWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGH 219
+ VA +ES +++ ++ N Y+ K R N+ + +N + R ++L G
Sbjct: 158 ----------LSVAREIESEVFKSEYSNVNDNYRNKLRTFTMNLRNKKNPELRERLLSGG 207
Query: 220 VKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGH 278
+KP I MS EMA + ++ L K ++F G + K V+D + CG+C H
Sbjct: 208 IKPAEFIKMSPNEMAPEALKKEIEKLHKK------NLFDAQGATEKRAVTDRFTCGKCKH 261
Query: 279 NKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
K+S YQ + D LT TC NC W
Sbjct: 262 KKVSYYQMQTRSADEPLTTFCTCENCGNRW 291
>gi|452001563|gb|EMD94022.1| hypothetical protein COCHEDRAFT_1201848 [Cochliobolus
heterostrophus C5]
Length = 306
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 30/278 (10%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA----- 98
T LL ST++ + + H +QKLA +L++ WRD + + K A
Sbjct: 42 TEDLLRSTRIGVTINRLRTHKDPAVQKLATELVAKWRDEVKKKQPPKKDGPAKVATSNGS 101
Query: 99 ----KLVENVKVEEVTNGEERRHD----SGNVPKKSISCMIKCNDSFREIVREKLYDALS 150
+ + +++HD N + + N++ VR +YD L+
Sbjct: 102 TSSPAPPPSGTASPAPSQSKKKHDVPSDKRNHKTDKVKYQVTGNEARDNCVR-LMYDGLA 160
Query: 151 KVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQD 210
+S+ D++ + +A VE+A Y N YK K R L N+ + N
Sbjct: 161 FMSEAMPDEI----------LNIAKHVEAAAYSNAGSVNDAYKGKMRSLFQNLKNKSNPQ 210
Query: 211 FRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDI 270
R++VL G + + + M+ EM SD + + L+K+ + + V + +S
Sbjct: 211 LRKRVLTGEITAKRFVVMTHDEMKSDARRAEDEKLEKEN-MNQAMVAQV----EKAISKE 265
Query: 271 YECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
++CG+C K+SY + D +T C+NC W
Sbjct: 266 FQCGKCKQKKVSYSQAQTRSADEPMTTFCECMNCGNRW 303
>gi|212536338|ref|XP_002148325.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
gi|210070724|gb|EEA24814.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
Length = 296
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 23/168 (13%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNI 203
+YD LS +S E+ I L KA I VE+A + + + YK K R L N+
Sbjct: 145 MYDGLSFMSTES---TKIVLTKA-------IAVEAAAFTSFGPETKEQYKTKIRSLFQNL 194
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVG 260
+ N R++VL G V P+ +NM+ E+ SD+ + + + K D A+ V
Sbjct: 195 KNKSNPQLRQRVLSGDVTPDKFVNMTHDELKSDERRALDQKIQKENMDKAM-------VA 247
Query: 261 LSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+ + I S + +CG+CG K++Y + D +T TCLNC + W
Sbjct: 248 QAERSISSSL-QCGKCGQRKVTYTEAQTRSADEPMTLFCTCLNCGKSW 294
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 132/287 (45%), Gaps = 27/287 (9%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ-KIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K+ IT LL ST++ + + K + ++ LA LI SW+ + ED
Sbjct: 28 MDLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSWKKLLDASEDKN 87
Query: 91 YVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCM---------IKCNDSFREIV 141
K+ + ++ ++ +++ + P ++IS I C D+ R
Sbjct: 88 DEK--KRNSSLATSSSKDASDTKDQSSNKKQDPPRTISTPKITTFPPIPITC-DAVRNKC 144
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLF 201
RE L AL +D A + C+ ++ +E +Y+ ++ YK + R +
Sbjct: 145 REMLTAALQTDNDHVA------IGADCE--HLSAQIEEYIYQDVKNTDMKYKNRVRSRIS 196
Query: 202 NISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGL 261
N+ D +N D R+ VL G + PE I M+++EMAS++++ + K+ A+ + G
Sbjct: 197 NLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKE-AIREHQMAKTGG 255
Query: 262 SRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 256 TQ----TDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 298
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 32/285 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++KN IT +LL ST V + + K + +I L+ LI SW+ + E
Sbjct: 28 LDLLRELKNMPITLELLQSTHVGMSVNALRKQSNDNEIITLSKSLIKSWKKLLDGSEQPG 87
Query: 91 YVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIK-------CNDSFREIVRE 143
E ++V+ + E VPK + + +DS R RE
Sbjct: 88 K----------EKLQVKPTCSKELGSSKKIEVPKTTAPSKMTRFPPLPVTSDSVRTKCRE 137
Query: 144 KLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNI 203
L L D A +L+ A +E ++ + ++ YK + R + N+
Sbjct: 138 MLIAVLQTDGDHVAIGADCELL--------AAQIEEVVFRELQNTDMKYKNRIRSRISNL 189
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSR 263
D +N D R+ VL G + PE I MS +EMAS++++ + K ++ + G ++
Sbjct: 190 KDSKNPDLRKNVLCGIITPEQIAIMSCEEMASNELKEMRKEITK-ASIQEHQMGKTGGTQ 248
Query: 264 KIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
SD++ CG+C +Y Q + D +T V C C W
Sbjct: 249 ----SDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 289
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 133/292 (45%), Gaps = 24/292 (8%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC-- 83
++A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 37 DKAGALDLLKELKNILMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDG 96
Query: 84 ----WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDS 136
D E+ + E + ++ R D N +S + +DS
Sbjct: 97 PSTDKDPEEKKKEPTISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDS 156
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKY 196
R RE L AL + D D V I D ++ +E A+Y++ ++ YK +
Sbjct: 157 VRLKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRV 208
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI 256
R + D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 209 RSRISVPKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQM 267
Query: 257 FPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 268 AKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 315
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 28/302 (9%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + + R D N +S + +DS R
Sbjct: 82 TDKDPEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YKFKYR 197
RE L AL D A + D + I+ IL C + M YK + R
Sbjct: 142 LKCREMLAAALRTGDDYIA--IGADEEELGSQIEEDIL---------CVNTDMKYKNRVR 190
Query: 198 CLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIF 257
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 191 SRISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMA 249
Query: 258 PVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYWVSTNLSFGV 316
G ++ +D++ CG+C +Y Q + D +T V C C W + + +
Sbjct: 250 KTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKTGTIKSEI 305
Query: 317 LP 318
P
Sbjct: 306 KP 307
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 36/287 (12%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++KN +IT +LL ST+V + + K + +I ++ LI SW+ + E
Sbjct: 28 LDLLRELKNMAITLELLQSTRVGMSVNALRKQSNDNEIITISKSLIKSWKKLLDGSEQPG 87
Query: 91 YVAVTKKAKLVENVKVEEVTNGEERRHDSGN--VPKKSISCMIK-------CNDSFREIV 141
K + + + S N VPK I+ + +DS R
Sbjct: 88 ------------KEKPQTIPTCSKELGSSKNIEVPKAPITPKMTRFPPLPVTSDSVRTKC 135
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLF 201
RE L AL D A + + A +E ++ + ++ YK + R +
Sbjct: 136 REMLRAALQTDGDHVAIGADCEFL--------AAQIEEVVFGEMQNTDMKYKNRIRSRIS 187
Query: 202 NISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGL 261
N+ D +N D R+ VL G + PE I MS +EMAS++++ + K A+ + G
Sbjct: 188 NLKDSKNPDLRKNVLCGVIGPEQIAVMSCEEMASNELKEMRKAMTK-AAIQEHQMAKTGG 246
Query: 262 SRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
++ +D++ CG+C +Y I D +T V C C W
Sbjct: 247 TQ----TDLFTCGKCKKKNCTYTQVQIRSADEPMTTFVACNECGNRW 289
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 24/285 (8%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K +T LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 320 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 378
Query: 91 YVAVTKKAKLVENVKVE--EVTNGEERRHDSGNVPKKS-----ISCMIKCNDSFREIVRE 143
+ + E E + +R + VP + C D+ R RE
Sbjct: 379 AREQRRAGPPPTSSSKEAPEAKDPSRKRPELPRVPSAPRITTFPPVPVTC-DAVRNKCRE 437
Query: 144 KLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNI 203
L AL D A V D C+ + I E ++ ++ YK + R + N+
Sbjct: 438 MLTAALQTDHDHMA--VGAD----CEGLSAQI--EECIFRDVGNTDMKYKNRVRSRISNL 489
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSR 263
D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++
Sbjct: 490 KDAKNPDLRRNVLCGVITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ 548
Query: 264 KIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+D++ CGRC +Y Q + D +T V C C W
Sbjct: 549 ----TDLFTCGRCRRKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 589
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 126/285 (44%), Gaps = 24/285 (8%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K +T LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 64 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKL-LDASDAK 122
Query: 91 YVAVTKKAKLVENVKVE--EVTNGEERRHDSGNVPKKS-----ISCMIKCNDSFREIVRE 143
+ L + E E + +R + +P + C D+ R RE
Sbjct: 123 ARERRRGGSLPTSSSKEASEAQDPSRKRPELPRMPSTPRITTFPPVPVTC-DAVRTKCRE 181
Query: 144 KLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNI 203
L AL +D D V I C +A +E ++ ++ YK + R L N+
Sbjct: 182 MLTAALQ--TDH--DHVAIGADCEC----LAGQIEECIFRDVGNTDMKYKNRVRSRLSNL 233
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSR 263
D +N RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++
Sbjct: 234 KDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ 292
Query: 264 KIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+D++ CG+C +Y Q + D +T V C C W
Sbjct: 293 ----TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 333
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
ID L ++KN ++ + L ST++ + + K S +++Q LA LI +W+ + ++ E
Sbjct: 27 IDLLQELKNMKMSLETLQSTRIGMSVNAVRKQSSDEEVQTLAKSLIKAWKKL---LDGSE 83
Query: 91 YVAVTKKAKLVENVKVEEVTNGEERRHDSGN------------------VPKKSISCMIK 132
KK + ++ ++ + D+ N P ++
Sbjct: 84 GKPEEKKGE----SPLQSSSSKDPGSSDTSNKPETPKTPTTPVTPKFTMFPPAPVT---- 135
Query: 133 CNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
DS R RE L AL D TI D +A +E +Y+++ ++ Y
Sbjct: 136 -TDSVRTKCRELLVAALQT----DGDHQTI----GADCEHMAAQIEDYIYQEFKSTDMKY 186
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
K + R + N+ D +N D RR VL G++ PE I +M+A+EMAS +++ L K+ ++
Sbjct: 187 KTRLRSRISNLKDQKNPDLRRNVLCGNISPERIASMTAEEMASPELKEIRKALTKE-SIR 245
Query: 253 TGHIFPVGLSRKIIVSDIYECGRC-GHNKISYQHSSILDDYNLTRHVTCLNCNQYW 307
+ VG + +D++ CG+C G N Q + D +T V C C W
Sbjct: 246 EHQLSKVGGTE----TDMFVCGKCKGKNCTYTQVQTRSADEPMTTFVLCNECGNRW 297
>gi|451849746|gb|EMD63049.1| hypothetical protein COCSADRAFT_182336 [Cochliobolus sativus
ND90Pr]
Length = 306
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 30/278 (10%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA----- 98
T LL ST++ + + H +QKLA +L++ WRD + + K A
Sbjct: 42 TEDLLRSTRIGVTINRLRTHKDPAVQKLATELVAKWRDEVKKKQPPKKDGPAKVATSNGS 101
Query: 99 ----KLVENVKVEEVTNGEERRHD----SGNVPKKSISCMIKCNDSFREIVREKLYDALS 150
+ + +++HD N + + N++ VR +YD L+
Sbjct: 102 ASSPAPPPSGTASPAPSQSKKKHDVPSDKRNHKTDKVKYQVTGNEARDNCVR-LMYDGLA 160
Query: 151 KVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQD 210
+S+ D++ + +A VE+A Y N YK K R L N+ + N
Sbjct: 161 FMSEAMPDEI----------LNIAKHVEAAAYSNAGSVNDAYKGKMRSLFQNLKNKSNPQ 210
Query: 211 FRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDI 270
R++VL G + + + M+ EM SD + + L+K+ + + V + +S
Sbjct: 211 LRKRVLTGEITAKRFVVMTHDEMKSDARRAEDEKLEKEN-MNQAMVAQV----EKAISKE 265
Query: 271 YECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
++CG+C K+SY + D +T C+NC W
Sbjct: 266 FQCGKCKQKKVSYSQAQTRSADEPMTTFCECMNCGNRW 303
>gi|291391945|ref|XP_002712401.1| PREDICTED: transcription elongation factor A 1 isoform 2
[Oryctolagus cuniculus]
Length = 279
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 29/292 (9%)
Query: 25 VVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCW 84
VV A+ +D + Q KN+S ++ +S IR + +++ LA LI SW+ +
Sbjct: 5 VVRIAKKMDKMVQKKNAST--RIGMSVNAIRK-----QSTDEEVTSLAKSLIKSWKKLLD 57
Query: 85 DVEDVEYVAVTKKAKLVENVKV----EEVTNGE-ERRHDSGNVPKKSISCMIKC---NDS 136
+ KK + + EE ++G R D N +S + +DS
Sbjct: 58 GPSTEKDPEEKKKEPAITSQNSPEAREESSSGNVSNRKDETNARDTYVSSFPRAPSTSDS 117
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKY 196
R RE L AL + D D V I D ++ +E A+Y++ ++ YK +
Sbjct: 118 VRLKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRV 169
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI 256
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 170 RSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQM 228
Query: 257 FPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 229 AKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 276
>gi|221042038|dbj|BAH12696.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 133/293 (45%), Gaps = 30/293 (10%)
Query: 25 VVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCW 84
VV A+ +D + Q KN+ ++ +S IR + +++ LA LI SW+ +
Sbjct: 5 VVRFAKKMDKMVQKKNAPT--RIGMSVNAIRK-----QSTDEEVTSLAKSLIKSWKKLLD 57
Query: 85 DVEDVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---ND 135
+ + KK + + + E ++G R D N +S + +D
Sbjct: 58 GPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSD 117
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S R RE L AL + D D + I D ++ +E A+Y++ ++ YK +
Sbjct: 118 SVRLKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNR 169
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 170 VRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQ 228
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 229 MAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 277
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 23/267 (8%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 81
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + + R D N +S + +DS R
Sbjct: 82 TDKDSEEKKKDTAVTSQNSPEAREESSSSGNMSSRKDETNARDTYVSSFPRAPSTSDSVR 141
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL + D D + I D ++ +E A+Y++ ++ YK + R
Sbjct: 142 LKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRS 193
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ +
Sbjct: 194 RISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAK 252
Query: 259 VGLSRKIIVSDIYECGRCGHNKISYQH 285
G ++ +D++ CG+C +Y
Sbjct: 253 TGGTQ----TDLFTCGKCKKKNCTYTQ 275
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 131/293 (44%), Gaps = 30/293 (10%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ + D
Sbjct: 22 AGALDLLKELKNIPMTLELLQSTRIGMSVNAICKQSTNEEVTSLAKSLIKSWKKL-LDGP 80
Query: 88 DVEYVAVTKK------------AKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCND 135
+ + KK AK + EE +P S +D
Sbjct: 81 STDKDSDEKKKEPAISSQNSPEAKEESSSSSNGSNRKEETNASDSFIP--SFPRAPSTSD 138
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S R L AL + D D + I D ++ +E A+Y++ ++ YK +
Sbjct: 139 SVPMRCRGMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQELRNTDMKYKNR 190
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ + +L K+ A+
Sbjct: 191 VRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMHKNLTKE-AIREHQ 249
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 250 MAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 298
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 32/289 (11%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L +++N ++ +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 26 AGALDLLKELRNIPMSLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLAFPP 85
Query: 88 D--------VEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFRE 139
+ V + + + EV H+ P S S +KC
Sbjct: 86 NTVGKKRSPVVFGTCSSSSNFSSRSDTTEVAPNS-LIHNFPRAPSTSDSIRLKC------ 138
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L +AL D I + C+ ++ +E +++++ ++ YK + R
Sbjct: 139 --REMLANALQTGED------YIAIGADCE--ELGAQIEECIFQEFKNTDMKYKNRVRSR 188
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N + RR VL G V PE + M+A+EMASD+++ +L K+ A+ +
Sbjct: 189 ISNLKDMKNPNLRRTVLCGSVSPERMAKMTAEEMASDELKEMRKNLTKE-AVRDHQMATT 247
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 248 GGTQ----TDLFTCGKCKGKCCTYTQVQTRSADEPMTTFVFCNQCGNRW 292
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 134/294 (45%), Gaps = 37/294 (12%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++KN +T +LL ST++ + + K + ++I LA LI SW+ + ++
Sbjct: 27 LDLLKELKNMPMTLELLQSTRIGMSVNAIRKQSTDEEITSLAKSLIKSWKKL------LD 80
Query: 91 YVAVTKKAKLVENVKVEEVTNGEERRH-------------DSGNVPKKSISCMIKC---N 134
+ K+++ + N E R DS IS + +
Sbjct: 81 GPSNDKESEEKKKESASSSQNSPEAREESSSSSNSNSKKEDSNISSDTYISSFPRAPSTS 140
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
DS R RE L AL K D D + I D ++ +E A++++ ++ YK
Sbjct: 141 DSVRMKCREMLAAAL-KTGD---DYIAI----GADEEELGSQIEEAIFQELKNTDMKYKN 192
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+ R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 193 RVRSRIANLKDTKNPNLRKNVLCGNILPDRFAKMTAEEMASDELKEMRKNLTKE-AIREH 251
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 252 QMAKTGGTQ----TDLFSCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 301
>gi|302683244|ref|XP_003031303.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
gi|300104995|gb|EFI96400.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
Length = 286
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 25/249 (10%)
Query: 63 HPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNV 122
H ++++ + A DL+ W++ DVE + TK + V
Sbjct: 56 HSNKEVSQAAKDLVKKWKN------DVERLKATKSPAPKAAPPTKAAPPPAPAPAKPSTV 109
Query: 123 PKKSISCMIKCN---DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVES 179
+ + + + N D R + + +Y+AL+ D D TI + A VE+
Sbjct: 110 ARTADTDKVTLNFTPDKLRNALSKLIYNALA--CDATCDSNTI--------AEKARDVEA 159
Query: 180 AMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
A+Y + +N YK K R L N+ N R +VL G ++P + MS +MAS++ +
Sbjct: 160 AVYNQNGCTNEAYKTKLRTLTANLKAKSNPGLRARVLKGELEPARLATMSVADMASEERK 219
Query: 240 LWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHV 298
+ + + T H +G + + +D ++CGRC K Y+ + D +T V
Sbjct: 220 AADSKIREQ----TIH-ESLGAAEQEAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFV 274
Query: 299 TCLNCNQYW 307
TC CN W
Sbjct: 275 TCTVCNNRW 283
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 32/289 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K +T LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 84 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 142
Query: 91 YVAVTKKAKLVENVK--VEEVTNGEERRHDSGNVPKKS---------ISCMIKCNDSFRE 139
+ L + E + +R + +P ++C D+ R
Sbjct: 143 TRERGRGMPLPTSSSKDASEAVDPSRKRSEMPRMPSTPRITTFPPVPVTC-----DAVRN 197
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL D A + DL + ++ +E ++ ++ YK + R
Sbjct: 198 KCREMLSAALQTDHDHVA--IGADLER------LSAQIEECIFRDVGNTDMKYKNRVRSR 249
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ +
Sbjct: 250 ISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMART 308
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ C +C +Y Q + D +T V C C W
Sbjct: 309 GGTQ----TDLFTCSKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 353
>gi|336369371|gb|EGN97713.1| hypothetical protein SERLA73DRAFT_184533 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382153|gb|EGO23304.1| hypothetical protein SERLADRAFT_472264 [Serpula lacrymans var.
lacrymans S7.9]
Length = 298
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 114/266 (42%), Gaps = 47/266 (17%)
Query: 63 HPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEV------------- 109
H ++++ LA +++ W++ +VE + + KA ++ K +
Sbjct: 56 HAAKEVSDLAKEVVKKWKN---EVERAKNGGTSSKAPNGDSAKARKASSVSVTPSTTSVT 112
Query: 110 -----TNGEER--RHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTI 162
GE R + DS VP D R+ E +YDAL+ S ++++
Sbjct: 113 PTPVSAKGEVRTAKGDSIKVPS--------TGDKTRDKCMELIYDALACDSGAPSEQI-- 162
Query: 163 DLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKP 222
+ A +ESA+ ++ + YK K R L N+ D N R ++ G +
Sbjct: 163 --------LGRARAIESAVVAQFSGPSVEYKSKIRSLFVNLKDKNNPGLRESIVSGDLSV 214
Query: 223 ETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS 282
E MS+ EMAS++ + ++ + +D + +G + + +D ++CGRC K
Sbjct: 215 EKFGKMSSAEMASEERKAADNKIKEDNFFKS-----LGAAEQEAETDAFQCGRCKQRKCR 269
Query: 283 YQHSSILD-DYNLTRHVTCLNCNQYW 307
Y+ + D +T VTC+NC W
Sbjct: 270 YRQAQTRSADEPMTTFVTCVNCGNRW 295
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 22/294 (7%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC---- 83
A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 1 AGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPS 60
Query: 84 --WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFR 138
D E+ + E + + R D N +S + +DS R
Sbjct: 61 TDKDSEEKKKDTAVTSQNSPEAREESSSSGNMSSRKDETNARDTYVSSFPRAPSTSDSVR 120
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVE----SAMYEKWCRSNGMYKF 194
RE L AL D A + D + I+ IL +Y++ ++ YK
Sbjct: 121 LKCREMLAAALRTGDDYIA--IGADEEELGSQIEEDILCVYIHIVPIYQEIRNTDMKYKN 178
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+ R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 179 RVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREH 237
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 238 QMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 287
>gi|201937|gb|AAA40418.1| transcription factor S-II [Mus musculus]
Length = 266
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 125/276 (45%), Gaps = 24/276 (8%)
Query: 43 ITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC------WDVEDVEYVAVT 95
+T +LL ST++ + + K + +++ LA LI SW+ + D E+ +
Sbjct: 1 MTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDPEEKKKEPAI 60
Query: 96 KKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFREIVREKLYDALSKV 152
E + ++ R D N +S + +DS R RE L AL +
Sbjct: 61 SSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAAL-RT 119
Query: 153 SDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFR 212
D D V I D ++ +E A+Y++ ++ YK + R + N+ D +N + R
Sbjct: 120 GD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLR 172
Query: 213 RKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYE 272
+ VL G++ P+ M+A+EMASD+++ +L K+ A+ + G ++ +D++
Sbjct: 173 KNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAKTGGTQ----TDLFT 227
Query: 273 CGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
CG+C +Y Q + D +T V C C W
Sbjct: 228 CGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 263
>gi|395841854|ref|XP_003793745.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Otolemur garnettii]
Length = 280
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 30/293 (10%)
Query: 25 VVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC- 83
VV A+ +D + Q KN+S ++ +S IR + +++ LA LI SW+ +
Sbjct: 5 VVRIAKKMDKMVQKKNAST--RIGMSVNAIRK-----QSTDEEVTSLAKSLIKSWKKLLD 57
Query: 84 -----WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---ND 135
D E+ + E + + R D N +S + +D
Sbjct: 58 GPSSDKDPEEKKKEPAITSQNSPEAKEESSSSGTISSRKDETNARDTYVSSFPRAPSTSD 117
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S R RE L AL + D D + I D ++ +E A+Y++ ++ YK +
Sbjct: 118 SVRLKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNR 169
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 170 VRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQ 228
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 229 MAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 277
>gi|448079285|ref|XP_004194362.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359375784|emb|CCE86366.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 32/253 (12%)
Query: 68 IQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNG------EERRHDSGN 121
IQ L +I WR+ + + +V+ K E TN +E + SG
Sbjct: 60 IQSLVKKMIRKWRESVQSEKTKKKSSVSVSDNNKSGEKAAEQTNSVAKAPPKENKFHSG- 118
Query: 122 VPKKSISCMIKCN---DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVE 178
P+ + I N + R LY AL+ D++++ + + VA +E
Sbjct: 119 -PRNPKTDGIDTNIYENLTRNASVSALYTALAIERDDSSEHI----------VAVAKDIE 167
Query: 179 SAMY--EKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
+ +Y EK S+ Y+ K R N+ + +N D R ++L G + PE I MS +MA +
Sbjct: 168 NEVYRSEKLSISDS-YRTKLRTFTMNLRNKKNPDLRDRLLSGKISPEAFIKMSPNDMAPE 226
Query: 237 KIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNL 294
++ L K ++F G + K V+D + CG+C H ++S YQ + D L
Sbjct: 227 ALKKEIEKLHKQ------NLFEAQGATEKRAVTDRFTCGKCKHKRVSYYQMQTRSADEPL 280
Query: 295 TRHVTCLNCNQYW 307
T TC NC W
Sbjct: 281 TTFCTCENCGNRW 293
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 142/322 (44%), Gaps = 33/322 (10%)
Query: 2 EKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPML 61
+K+ D+ AK+ A K G A +D L ++++ +T +LL ST++ + +
Sbjct: 3 KKEEEDIIRIAKKMDKMAQKKNG----AGALDLLKELRSIPMTLELLQSTRIGMSVNAIR 58
Query: 62 KHPSQ-KIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHD-- 118
K + ++ LA LI SW+ + + + + K+ + V + + +
Sbjct: 59 KQSTDDEVTSLAKALIKSWKKLLDEPSSGDKPSDEKRKEPTTPVSPSQGSPEAKEESSSS 118
Query: 119 ------------SGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVK 166
S N + +DS R RE L +AL D A +
Sbjct: 119 SNSSSKSEPGEVSTNTLINTFPRAPGTSDSIRIKCRELLANALQAGDDHIA------IGA 172
Query: 167 ACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETII 226
CD ++ +E +++++ ++ YK + R + N+ D +N + RR VL G V PE +
Sbjct: 173 DCD--ELGAQIEEVIFQEFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMA 230
Query: 227 NMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QH 285
MSA+EMASD+++ +L K+ A+ + G ++ +D++ CG+C +Y Q
Sbjct: 231 KMSAEEMASDELREMRKNLTKE-AVRDHQMATTGGTQ----TDLFTCGKCKGKCCTYTQV 285
Query: 286 SSILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 286 QTRSADEPMTTFVFCNECGNRW 307
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 131/285 (45%), Gaps = 24/285 (8%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ-KIQKLAYDLISSWRDMCWDVEDV- 89
+D L ++K+ IT LL ST++ + + K + ++ LA LI SW+ + ED
Sbjct: 28 MDLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKSWKKLLDASEDKN 87
Query: 90 ----EYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSI--SCMIKCNDSFREIVRE 143
++ +K + K ++ +N ++ + PK + I C D+ R RE
Sbjct: 88 DEKKRNSSLATSSKDASDTK-DQSSNKKQDPPRTLTTPKITTFPPIPITC-DAVRNKCRE 145
Query: 144 KLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNI 203
L AL +D A + C+ + I E +Y+ ++ YK + R + N+
Sbjct: 146 MLTAALQTDNDHIA------IGADCEHLSAQI--EEYIYQDVKNTDMKYKNRVRSRISNL 197
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSR 263
D +N D R+ VL G + PE I M+++EMAS++++ + K+ A+ + G ++
Sbjct: 198 KDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKE-AIREHQMAKTGGTQ 256
Query: 264 KIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+D++ CG+C +Y Q + D +T V C C W
Sbjct: 257 ----TDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 297
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 133/298 (44%), Gaps = 34/298 (11%)
Query: 29 ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVE 87
A +D L ++++ +T +LL ST++ + + K + +++ LA LI SW+ + +
Sbjct: 26 AGALDLLKELRSIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDEPG 85
Query: 88 DVEYVAVTKKAKLVENVKVEEVTNGEERRHD-----------------SGNVPKKSISCM 130
+ + K+ + ++ V + G + + N +
Sbjct: 86 AGDKASEEKRKE--QSTPVVSPSQGSPEAKEESSSSSNSSSKSEPSEVASNTLINTFPRA 143
Query: 131 IKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNG 190
+DS R RE L AL D I + CD ++ +E +++++ ++
Sbjct: 144 PSTSDSIRIKCREMLASALQTGDD------YIAIGADCD--ELGAQIEECIFQEFKNTDM 195
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGA 250
YK + R + N+ D +N + RR VL G V PE + M+A+EMASD+++ +L K+ A
Sbjct: 196 KYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMTAEEMASDELKEMRKNLTKE-A 254
Query: 251 LVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ + G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 255 VRDHQMATTGGTQ----TDLFTCGKCKGKSCTYTQVQTRSADEPMTTFVFCNECGNRW 308
>gi|363755550|ref|XP_003647990.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892026|gb|AET41173.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
Length = 306
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 45/288 (15%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKK------ 97
T +LL T+V + K +++I KL +IS+W+D + V +
Sbjct: 37 TEKLLRETKVGVIVNQFKKSANEEISKLVKKMISAWKDAISKEKKKRAATVAQSGSASSG 96
Query: 98 -----------AKLVENVKVEEVTNGEERRHDSG--NVPKKSISCMIKCNDSFREIVREK 144
A + +N ++ +E+ H G N ++ I ND R++V +
Sbjct: 97 SSSTSGNSHTIAVVCDNANEPKI---QEKYHAKGPRNAKNDGVNTTI-YNDKLRDMVIKA 152
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW--CRSNGMYKFKYRCLLFN 202
YDAL+K S+ + + +AI +E MY+ ++ YK KYR + N
Sbjct: 153 FYDALAKQSEHPPQSI----------LAIAIDIEKHMYKLKIPAENDKGYKDKYRVIYSN 202
Query: 203 ISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKD-GALVTGHIFPV-G 260
+ N D + K+ G + P+ ++N KE+A + HL K + ++F G
Sbjct: 203 VISKNNPDLKHKITNGDISPDYLVNCDPKELAPE-------HLKKKLEEIAKQNLFNAQG 255
Query: 261 LSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+ + V+D ++CG+C K+S YQ + D LT TC C W
Sbjct: 256 ATLERSVTDRFQCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 303
>gi|294656076|ref|XP_458316.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
gi|199430838|emb|CAG86394.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
Length = 290
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 24/270 (8%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVT---KKAKL 100
T +LL T+V + + + ++ L +I +WR++ + + + K +K
Sbjct: 36 TEKLLRETKVGVAVNKFRGNSNPEVSSLVKKMIRNWREVVQNEKTKKKTGSATPDKDSKP 95
Query: 101 VENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKV 160
V N + T E + H PK +++ R LY AL+ +++ + +
Sbjct: 96 VNNNTKQSST--ESKFHSGPRNPKTDGINTTLYDNTTRNASVSALYTALAIERNDSGEHI 153
Query: 161 TIDLVKACDPIQVAILVESAMYE-KWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGH 219
+ V+ +E+ +++ ++ N Y+ K R N+ + +N D R ++L
Sbjct: 154 ----------LAVSRDIENEVFKAEYSSVNDNYRNKLRTFTMNLRNKKNPDLRDRLLTNK 203
Query: 220 VKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGH 278
+KP I M+ EMA + ++ L K ++F G + K V+D + CG+C H
Sbjct: 204 IKPSNFIKMTPNEMAPESLKKEIEKLHKQ------NLFDAQGATEKRAVTDRFTCGKCKH 257
Query: 279 NKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
K+S YQ + D LT TC NC W
Sbjct: 258 KKVSYYQMQTRSADEPLTTFCTCENCGNRW 287
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 134/300 (44%), Gaps = 24/300 (8%)
Query: 25 VVEE--ARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRD 81
+VE+ A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+
Sbjct: 18 IVEQVSAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKK 77
Query: 82 MC------WDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC-- 133
+ D E+ + E + + R D N +S +
Sbjct: 78 LLDGPSTDKDSEEKKKDTAVTSQNSPEAREESSSSGNTSSRKDETNARDTYVSSFPRAPS 137
Query: 134 -NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILV----ESAMYEKWCRS 188
+DS R RE L AL D A + D + I+ IL +Y++ +
Sbjct: 138 TSDSVRLKCREMLAAALRTGDDYIA--IGADEEELGSQIEEDILCVYIHNVPIYQEIRNT 195
Query: 189 NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKD 248
+ YK + + + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+
Sbjct: 196 DMKYKNRIQSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE 255
Query: 249 GALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
A+ + G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 256 -AIREHQMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 310
>gi|208968915|dbj|BAG74296.1| Transcription elongation factor A protein 1 [synthetic construct]
Length = 284
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 28/294 (9%)
Query: 25 VVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC 83
VV A+ +D + N +T +LL ST++ + + K + +++ LA LI SW+ +
Sbjct: 5 VVRFAKKMDKM----NIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLL 60
Query: 84 WDVEDVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDSGNVPKKSISCMIKC---N 134
+ + KK + + + E ++G R D N +S + +
Sbjct: 61 DGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTS 120
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
DS + RE L AL + D D + I D ++ +E A+Y++ ++ YK
Sbjct: 121 DSVQLKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKN 172
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+ R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 173 RVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMWKNLTKE-AIREH 231
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 232 QMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPVTTFVVCNECGNRW 281
>gi|301111450|ref|XP_002904804.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
gi|262095134|gb|EEY53186.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
Length = 307
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 129/303 (42%), Gaps = 36/303 (11%)
Query: 25 VVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCW 84
V ++ ++ L ++ +++TY +L T++ + + KH ++KI LA L+ SW++M
Sbjct: 19 VTDQVEALEVLRGLEKTTVTYAILKETKMGHTVGKLRKHENEKIASLARLLVKSWKNMAL 78
Query: 85 D----VEDVEYVAVT--KKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFR 138
V D E A + K + KV +NG + S + D R
Sbjct: 79 SPRPLVSDPERKASSSGNSNKTEVSSKVTSGSNGLKTAPKPAGARPSSAPFIPAGLDKVR 138
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW-----CRSNGMYK 193
VR KL + L EA++ +P +VA +E AM + Y
Sbjct: 139 ATVRTKLKEIL-----EASE--------GGNPGEVAAAIEVAMARIYHMGAPGEQKKDYM 185
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
KYR L FN+ +N D R+ +L V + +I MSA+E+A+++ + L +D A
Sbjct: 186 AKYRQLSFNLK--KNGDLRQNLLDDSVSGDQLIKMSAEELATEEKRAQIEKL-RDDAFQE 242
Query: 254 GHIFPVGLSRKII--------VSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCN 304
+ + + I ++ CGRC +K S Q + D +T V C NC
Sbjct: 243 ARLDWAEANHEKIQKQTGTEGTKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVMCHNCG 302
Query: 305 QYW 307
W
Sbjct: 303 NRW 305
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 139/311 (44%), Gaps = 32/311 (10%)
Query: 12 AKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ-KIQK 70
AK+ A K GV +D L ++KN +T +LL ST++ + + K + ++
Sbjct: 13 AKKMDKMAQKKNGV----GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDDEVTS 68
Query: 71 LAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGN--------- 121
LA LI SW+ + + + KK + V E + S N
Sbjct: 69 LAKSLIKSWKKLLDEPAADKNSEEKKKERTTPVVSPSETSPEPREESSSSNSSSKSESVD 128
Query: 122 -VPKKSISCMIKC---NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILV 177
P I+ + +DS R RE L +AL D I + CD ++ +
Sbjct: 129 VTPNTLIATFPRAPGTSDSVRIKCREMLSNALQTGDD------YITIGSDCD--ELGAQI 180
Query: 178 ESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDK 237
E ++ ++ ++ YK + R + N+ D +N + RR VL G+V P+ I M+A+EMASD+
Sbjct: 181 EECIFLEFKNTDMKYKNRVRSRISNLKDAKNPNLRRNVLCGNVSPDRIAKMTAEEMASDE 240
Query: 238 IQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTR 296
++ +L K+ A+ + G ++ +D++ CG+C K +Y Q + D +T
Sbjct: 241 LKEMRKNLTKE-AIRDHQVATSGGTQ----TDLFTCGKCKKKKCTYTQVQTRSADEPMTT 295
Query: 297 HVTCLNCNQYW 307
V C C W
Sbjct: 296 FVFCNECGNRW 306
>gi|367015614|ref|XP_003682306.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
gi|359749968|emb|CCE93095.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
Length = 295
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 122/280 (43%), Gaps = 41/280 (14%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T +LL T+V + K + +I KL +I+SW+D + +KKAK +
Sbjct: 38 TEKLLRETKVGVEVNKFKKSSNPEIAKLVKKMITSWKDA---------INRSKKAKQPQQ 88
Query: 104 VKVEEV-------TNGEERRHD--SGNVPKKSISCMIKCN---DSFREIVREKLYDALSK 151
+ + ++ E ++HD S P+ S + + N R++V +YDAL+K
Sbjct: 89 QQQQPQPQQPSQHSSAEPKKHDKFSSTKPRNSRNDGVDTNIYNHKLRDMVIRAMYDALAK 148
Query: 152 VSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCR-SNGMYKFKYRCLLFNISDPENQ 209
S+ + +Q A VE M++ C S YK KYR + NI N
Sbjct: 149 DSEHPPKSI----------LQTAKAVEEEMHKLNNCDGSEKAYKDKYRIIYSNIISKNNP 198
Query: 210 DFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVS 268
D + K+ G V P ++N KE+A + H K + ++F G + + V+
Sbjct: 199 DLKHKITSGDVSPFYLVNCDPKELAPE------HLRRKLEEIAKQNLFNAQGATVERSVT 252
Query: 269 DIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
D + CG+C K+S YQ + D LT TC C W
Sbjct: 253 DRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRW 292
>gi|297827973|ref|XP_002881869.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
gi|297327708|gb|EFH58128.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 112/243 (46%), Gaps = 54/243 (22%)
Query: 2 EKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNS--SITYQLLVSTQVIRHLLP 59
+++ ++L +AA RAA + + E +R +DA++++K + S+ ++ +T + + L
Sbjct: 3 KQEFLELFDAALRAAKSVKGVKNSPEVSRFVDAMNRLKEAPESLACDVVCTTSMGKGLRF 62
Query: 60 MLKHPSQKIQ---KLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERR 116
H + +I+ KL +DL W K+ + E+ R
Sbjct: 63 FKDHKNPQIRSEGKLLWDL--------W-------------------TKIIHASGREKSR 95
Query: 117 HDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAIL 176
V + S + K DS R+ VRE L +L+KV+ E D V ACDP VAI
Sbjct: 96 DRDTPVKIPTDSTIKKTGDSKRDKVREILQTSLAKVATEVVDTEMKTRVTACDPWVVAIS 155
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
VESAM+E SN N D RRKVL+G + E ++ M +EM S+
Sbjct: 156 VESAMFE----SN------------------NPDLRRKVLIGEINGERLVTMERQEMGSE 193
Query: 237 KIQ 239
KIQ
Sbjct: 194 KIQ 196
>gi|409075972|gb|EKM76347.1| hypothetical protein AGABI1DRAFT_45124 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 293
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 44/283 (15%)
Query: 42 SITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLV 101
++T +L T+ + + H S+++ A +++ W+ + +K KL
Sbjct: 35 NVTESILRETKAGLAVGKLRSHASKEVADNAKEIVKKWK------------SAVEKEKLA 82
Query: 102 ENVKVEEVTNGEERRHDSGNVPKKSISCMIK----------------CNDSFREIVREKL 145
+ NG+ R S N+ M D+ R+ E +
Sbjct: 83 NGGTPKPQQNGKPERKMSSNISTPVTPTMTSGKPNGRSAKLDGVKGGTGDTTRDKCIELV 142
Query: 146 YDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISD 205
YDAL V+D +A ++L+ + A VE ++ + YK K R L N+ D
Sbjct: 143 YDAL--VNDSSA---PVELI-----LSRARGVEKCVHHDNGGTTAAYKQKIRSLFVNLKD 192
Query: 206 PENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKI 265
N FR V+ G V E + M++++MAS++ + + + ++ + + + +
Sbjct: 193 KNNPGFRENVISGDVPVEKLAKMTSEDMASEERKAADRKIKEENLFKS-----LSAAEQA 247
Query: 266 IVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+D ++CGRC + Y+ + D +T VTC NC W
Sbjct: 248 AETDAFQCGRCKQRQCRYRQAQTRSADEPMTTFVTCTNCGNRW 290
>gi|426192898|gb|EKV42833.1| hypothetical protein AGABI2DRAFT_195610 [Agaricus bisporus var.
bisporus H97]
Length = 293
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 44/283 (15%)
Query: 42 SITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLV 101
++T +L T+ + + H S+++ A +++ W+ + +K KL
Sbjct: 35 NVTESILRETKAGLAVGKLRSHASKEVADNAKEIVKKWK------------SAVEKEKLA 82
Query: 102 ENVKVEEVTNGEERRHDSGNVPKKSISCMIK----------------CNDSFREIVREKL 145
+ NG+ R S N+ M D+ R+ E +
Sbjct: 83 NGGTPKPQQNGKPERKMSSNISTPVTPTMTSGKPNGRSAKLDGVKGGTGDTTRDKCIELV 142
Query: 146 YDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISD 205
YDAL V+D +A ++L+ + A VE ++ + YK K R L N+ D
Sbjct: 143 YDAL--VNDSSA---PVELI-----LSRARGVEKCVHHDNGGTTAAYKQKIRSLFVNLKD 192
Query: 206 PENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKI 265
N FR V+ G V E + M++++MAS++ + + + ++ + + + +
Sbjct: 193 KNNPGFRENVISGDVPVEKLAKMTSEDMASEERKAADRKIKEENLFKS-----LSAAEQA 247
Query: 266 IVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+D ++CGRC + Y+ + D +T VTC NC W
Sbjct: 248 AETDAFQCGRCKQRQCRYRQAQTRSADEPMTTFVTCTNCGNRW 290
>gi|145351408|ref|XP_001420072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580305|gb|ABO98365.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 173
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 130 MIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILV---ESAMYEKWC 186
+ + ND+ R+ RE DAL+ VT +++ D ++A +V E++M KW
Sbjct: 1 LTRVNDAARDRTREIFADALALC-------VTDGKIESVDAKKLASIVDQIENSMTAKWP 53
Query: 187 RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLD 246
YK K R L FN+ D +N D R + G + +I++S +E+ S++ + N +
Sbjct: 54 SGGKDYKAKVRQLAFNLKDAKNPDLRTNLATGEISAGVLIDLSPEELGSNERRNANERIR 113
Query: 247 KDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQ 305
+ V ++ +D ++CG+C K + YQ + D +T VTC+ C
Sbjct: 114 E-----LAEWEAVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVECGN 168
Query: 306 YW 307
W
Sbjct: 169 RW 170
>gi|226478976|emb|CAX72983.1| RNA polymerase II elongation factor [Schistosoma japonicum]
Length = 317
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 130/319 (40%), Gaps = 49/319 (15%)
Query: 20 VWKEGVVEEARCIDALDQIKNSSITYQLLVSTQV---IRHLLPMLKHPSQKIQKLAYDLI 76
+ K +++ + L +++N +T ++L T V I + + P ++ L ++I
Sbjct: 14 MLKNKKIDDESALKYLKRLRNIEMTLEILTKTGVGIIINKIRKESEDP--EVATLGKNMI 71
Query: 77 SSWRDMCWDVEDVE--------------------------YVAVTKKAKLVENVKVEEVT 110
W+ + D DV YV ++ K +
Sbjct: 72 KQWKKLVPDKSDVPAPCTNTVGSTNNGGNGNIKHSPELSTYVGSDDSGP--QDAKRSRPS 129
Query: 111 NGEERRHDSGNVPKKSISC-MIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACD 169
+E SGN + + ND R RE L AL + + A +
Sbjct: 130 EKKEPTEPSGNASRGFFPVHTLTTNDQVRLKAREMLQSALESGNIPSG---------AYE 180
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
+AI +ES++Y+ + ++ YK + R + N+ D N + R VL+GHV P+ + +M+
Sbjct: 181 SEFLAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMT 240
Query: 230 AKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSI 288
++EMAS +++ K+ + H V + +D+ CG+C K +Y Q +
Sbjct: 241 SEEMASKEMKELREKYTKE--TIEDHQMAVTGGTE---TDLLRCGKCKQTKCTYNQVQTR 295
Query: 289 LDDYNLTRHVTCLNCNQYW 307
D +T V C NC W
Sbjct: 296 SADEPMTTFVYCNNCGHRW 314
>gi|388583993|gb|EIM24294.1| transcription elongation factor [Wallemia sebi CBS 633.66]
Length = 282
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 32 IDALDQIKNS-SITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVE 90
I+ L +K+ + T L+ T++ + + H ++++ +L+ +++ W+
Sbjct: 26 IELLQTLKDEMTATEDLIRVTKIGLAVGKLRSHDNKQVSELSKEIVKKWKQ--------- 76
Query: 91 YVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMI---KCNDSFREIVREKLYD 147
VTKK K E T + + + P+ + + K ND R+ LY+
Sbjct: 77 --DVTKKPKAA--APSAESTTTPAKPSEKPDQPRSGKTDGVDFEKLNDKTRDTCLSLLYN 132
Query: 148 ALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YKFKYRCLLFNISDP 206
A+ V D +A +LV ++ A+ +ES + + S G YK K R L+ N+ D
Sbjct: 133 AM--VFDSSAPS---ELV-----MERALSIESTVLDDNNGSTGEEYKKKVRSLMLNLKDK 182
Query: 207 ENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKI 265
+N R V+ G T MS+ +MAS+ +D AL ++F G +
Sbjct: 183 KNPSLREAVISGDTPAATFCRMSSADMASE------ERKQQDRALELSNLFKARGAGPQQ 236
Query: 266 IVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+D ++CGRC K +Y Q + D +T VTC CN W
Sbjct: 237 AETDSFKCGRCKQRKCTYYQMQTRSADEPMTTFVTCTVCNNRW 279
>gi|255083388|ref|XP_002504680.1| predicted protein [Micromonas sp. RCC299]
gi|226519948|gb|ACO65938.1| predicted protein [Micromonas sp. RCC299]
Length = 114
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK K R L FN+ DP+N D RR V G + P+ ++++ +E+ SD+ + N + ++ A
Sbjct: 1 YKAKVRQLSFNLKDPKNPDLRRSVADGLISPKVLLDLKPEELGSDERRNENAAI-REAAT 59
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
V ++ +D ++CG+CG K + YQ + D +T VTC+NC+ W
Sbjct: 60 AEA----VRGQKQQASTDAFKCGKCGQRKCTYYQLQTRSADEPMTTFVTCVNCDNRW 112
>gi|405121407|gb|AFR96176.1| positive transcription elongation factor [Cryptococcus neoformans
var. grubii H99]
Length = 333
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 28/190 (14%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTID-LVKACDPIQVAILVESAM-YEKWC------ 186
DS R+ +YDAL A D ++ L+ A I++ IL E A+ E+
Sbjct: 152 DSVRDKCVVMIYDAL------ALDSTAVERLIDATQIIEIKILKERAVGIERAANKAMNF 205
Query: 187 ------RSNGMYKFK--YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
R+N + K + R L N+ D N R +++LG+V E + +MS EMAS+ +
Sbjct: 206 STGNDYRANQLAKSEQEMRSLFLNLKDKGNPALRNEIVLGYVSTEKVASMSKDEMASESV 265
Query: 239 QLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRH 297
++ + D VG+++ +D ++CGRC K + YQ + D +T
Sbjct: 266 RMLKEKIASDNLF---KAKAVGVTQ--AETDAFKCGRCHQRKCTYYQMQTRSADEPMTTF 320
Query: 298 VTCLNCNQYW 307
VTC NCN W
Sbjct: 321 VTCTNCNNRW 330
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 32/289 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++KN IT LL ST+V + + K S +++ LA LI SW+ + DV D +
Sbjct: 27 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKL-LDVSDGK 85
Query: 91 YVAVTKKAKLVENVK--VEEVTNGEERRHDSGNVPKKS---------ISCMIKCNDSFRE 139
+ L + T+ ++ D P I+C D+ R
Sbjct: 86 SRNQGRGTPLPTSSSKDASRTTDLSCKKPDPPRTPSTPRITTFPQVPITC-----DAVRN 140
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL D A V + ++ +E ++ ++ YK + R
Sbjct: 141 KCREMLTLALQTDHDHVAVGVNCE--------HLSSQIEECIFLDVGNTDMKYKNRVRSR 192
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N RR VL G + P+ I M+++EMASD+++ + K+ A+ +
Sbjct: 193 ISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMART 251
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ C +C +Y Q + D +T +V C C W
Sbjct: 252 GGTQ----TDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW 296
>gi|448083875|ref|XP_004195463.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359376885|emb|CCE85268.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 32/274 (11%)
Query: 47 LLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKV 106
LL T+V + + +IQ + +I WR+ + + + +V+ K
Sbjct: 39 LLRETKVGVAVNKFRTSSNPEIQSIVKKMIRKWRESVQNEKTKKKSSVSVSDGNKSGEKG 98
Query: 107 EEVTNG------EERRHDSGNVPKKSISCMIKCN---DSFREIVREKLYDALSKVSDEAA 157
E TN +E + SG P+ + I N + R LY AL+ D+++
Sbjct: 99 AEQTNSVAKALPKENKFHSG--PRNPKTDGIDTNIYENLTRNASVSALYTALAIERDDSS 156
Query: 158 DKVTIDLVKACDPIQVAILVESAMY--EKWCRSNGMYKFKYRCLLFNISDPENQDFRRKV 215
+ + + VA +E+ +Y EK S+ Y+ K R N+ + +N D R ++
Sbjct: 157 EHI----------VAVAKDIENEVYRSEKLSISDS-YRTKLRTFTMNLRNKKNPDLRDRL 205
Query: 216 LLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECG 274
L G + PE I MS +MA + ++ L K ++F G + K V+D + CG
Sbjct: 206 LSGKISPEAFIKMSPNDMAPEALKKEIEKLHKQ------NLFEAQGATEKRAVTDRFTCG 259
Query: 275 RCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+C H ++S YQ + D LT TC NC W
Sbjct: 260 KCKHKRVSYYQMQTRSADEPLTTFCTCENCGNRW 293
>gi|255730739|ref|XP_002550294.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
gi|240132251|gb|EER31809.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
Length = 312
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 171 IQVAILVESAMYE-KWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
+++A +ES +++ ++ R + Y+ K R N+ + +N + R ++L + I M+
Sbjct: 176 LKIATEIESEVFKSQYSRVDDTYRNKLRSFTMNLRNKKNPELRERILTKQITAAAFIKMT 235
Query: 230 AKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSS 287
KEMA + ++L L K ++F G + K V+D + CG+C H K+S YQ +
Sbjct: 236 PKEMAPEALKLEIEKLHKQ------NLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 289
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D LT TC NC W
Sbjct: 290 RSADEPLTTFCTCENCGNRW 309
>gi|268532566|ref|XP_002631411.1| Hypothetical protein CBG03263 [Caenorhabditis briggsae]
Length = 305
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP ++A+ +E +Y +N Y R +FN+ D +N R VL G V+ E M
Sbjct: 168 DPEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 227
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+++EMAS +I+ K+ L H V ++ SD+++CG+CG +Y Q +
Sbjct: 228 TSEEMASPEIREMREKFTKEAIL--EHQVSV---QQGTPSDMFKCGKCGKKNCTYTQLQT 282
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V CL C W
Sbjct: 283 RSSDEPMTTFVFCLECGNRW 302
>gi|17536493|ref|NP_495941.1| Protein T24H10.1 [Caenorhabditis elegans]
gi|1729914|sp|P52652.1|TFS2_CAEEL RecName: Full=Putative transcription elongation factor S-II;
AltName: Full=TFIIS
gi|3880168|emb|CAA90943.1| Protein T24H10.1 [Caenorhabditis elegans]
Length = 308
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP ++A+ +E +Y +N Y R +FN+ D +N R VL G V+ E M
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKSYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+++EMAS +I+ K+ L H V ++ SD+++CG+CG +Y Q +
Sbjct: 231 TSEEMASAEIREMRDKFTKEAIL--EHQMSV---QQGTPSDMFKCGKCGKKNCTYTQLQT 285
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V CL C W
Sbjct: 286 RSSDEPMTTFVFCLECGNRW 305
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 32/289 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++KN IT LL ST+V + + K S +++ LA LI SW+ + DV D +
Sbjct: 1 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKL-LDVSDGK 59
Query: 91 YVAVTKKAKLVENVK--VEEVTNGEERRHDSGNVPKKS---------ISCMIKCNDSFRE 139
+ L + T+ ++ D P I+C D+ R
Sbjct: 60 SRNQGRGTPLPTSSSKDASRTTDLSCKKPDPPRTPSTPRITTFPQVPITC-----DAVRN 114
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL D A V + ++ +E ++ ++ YK + R
Sbjct: 115 KCREMLTLALQTDHDHVAVGVNCE--------HLSSQIEECIFLDVGNADMKYKNRVRSR 166
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N RR VL G + P+ I M+++EMASD+++ + K+ A+ +
Sbjct: 167 ISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMART 225
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ C +C +Y Q + D +T +V C C W
Sbjct: 226 GGTQ----TDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW 270
>gi|119607146|gb|EAW86740.1| transcription elongation factor A (SII), 1, isoform CRA_b [Homo
sapiens]
Length = 260
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 66 QKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN-----VKVEEVTNGE-ERRHDS 119
+++ LA LI SW+ + + + KK + + + E ++G R D
Sbjct: 19 EEVTSLAKSLIKSWKKLLDGPSTEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDE 78
Query: 120 GNVPKKSISCMIKC---NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAIL 176
N +S + +DS R RE L AL + D D + I D ++
Sbjct: 79 TNARDTYVSSFPRAPSTSDSVRLKCREMLAAAL-RTGD---DYIAI----GADEEELGSQ 130
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
+E A+Y++ ++ YK + R + N+ D +N + R+ VL G++ P+ M+A+EMASD
Sbjct: 131 IEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASD 190
Query: 237 KIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLT 295
+++ +L K+ A+ + G ++ +D++ CG+C +Y Q + D +T
Sbjct: 191 ELKEMRKNLTKE-AIREHQMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMT 245
Query: 296 RHVTCLNCNQYW 307
V C C W
Sbjct: 246 TFVVCNECGNRW 257
>gi|241948245|ref|XP_002416845.1| DNA strand transfer protein alpha, putative; dna strand transferase
1, putative; pyrimidine pathway regulatory protein 2,
putative; transcription elongation factor SII, putative
[Candida dubliniensis CD36]
gi|223640183|emb|CAX44432.1| DNA strand transfer protein alpha, putative [Candida dubliniensis
CD36]
Length = 303
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 115/282 (40%), Gaps = 35/282 (12%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA----- 98
T +LL T+V + H S +I L +I +WRD ++ + T
Sbjct: 36 TEKLLRETKVGVAVNKFRSHDSAEINGLVKKMIRNWRDAVQAEKNNKKKLATAAGTGAPS 95
Query: 99 ----------KLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDA 148
K E + R N ++ + ND+ R LY +
Sbjct: 96 SSAISPSSSASGSTTPKPSETSTPAAVRKGPRNPKTDGVNTQLYENDT-RNASVSALYTS 154
Query: 149 LSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSNGMYKFKYRCLLFNISDPE 207
L+ D++ + +++AI +ES +Y+ ++ + + Y+ K R N+ + +
Sbjct: 155 LAVDRDDSPKHI----------LRIAIEIESEVYKNEYSKISDSYRNKLRSFTMNLRNKK 204
Query: 208 NQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKII 266
N + R ++L + P I MS EMA + ++ L K ++F G + K
Sbjct: 205 NPELRERILSKQILPAEFIKMSPNEMAPEALKKEIEKLHKQ------NLFDAQGATEKRA 258
Query: 267 VSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
V+D + CG+C H K+S YQ + D LT TC NC W
Sbjct: 259 VTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRW 300
>gi|427797651|gb|JAA64277.1| Putative transcription elongation factor a sii 1, partial
[Rhipicephalus pulchellus]
Length = 292
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 163 DLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKP 222
D+ + C+ +A +E ++Y ++ +N YK + R + N+ D +N R VL G ++P
Sbjct: 149 DMPEGCNTDSLAAKIEESIYNEFGDTNNKYKNRVRSRVSNLKDSKNPALRINVLHGAIEP 208
Query: 223 ETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS 282
E I M+A+EMASD ++ L K+ A+ + G ++ +D+ +CG+C N +
Sbjct: 209 ERIARMTAEEMASDDMKQLRQRLTKE-AINDHQMATTGGTK----TDLLKCGKCRKNNCT 263
Query: 283 Y-QHSSILDDYNLTRHVTCLNCNQYW 307
Y Q + D +T C C W
Sbjct: 264 YNQVQTRSADEPMTTFCFCNECGHRW 289
>gi|302507047|ref|XP_003015480.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
gi|291179052|gb|EFE34840.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
Length = 297
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 116/274 (42%), Gaps = 28/274 (10%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL ST++ + + +H S + +L+ +++S WR + + K N
Sbjct: 40 TEDLLRSTKIGIIVNRLKQHKSPDVARLSSEIVSKWRAEVNKQKKTASPGSSDSPKPTPN 99
Query: 104 VKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREI-VREK----LYDALSKVSDEAAD 158
+ ++ S P K + N S + R+ +YD L S E+
Sbjct: 100 GTGTPASATNDKAQSSNVPPDKRNWKADQVNTSVTNVKARDSCIGLMYDGLCLGSTESPQ 159
Query: 159 KVTIDLVKACDPIQVAILVESAMYEKWCRSNG-MYKFKYRCLLFNISDPENQDFRRKVLL 217
V ++ A VE+A ++ + N +Y+ K R L N+ + N R +VL
Sbjct: 160 AV----------LRKATEVEAAAFKAFGPENKEVYRTKMRSLFQNLKNKSNLSLRTRVLT 209
Query: 218 GHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDIYECG 274
V PE +NM+ +E+ SD+ + + + K D A+ VG + I S +CG
Sbjct: 210 NEVTPERFVNMTHEELKSDERREEDRKIQKENMDKAM-------VGQPERSI-SKSLQCG 261
Query: 275 RCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+CG K++Y + D +T TCL C + W
Sbjct: 262 KCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSW 295
>gi|164661661|ref|XP_001731953.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
gi|159105854|gb|EDP44739.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
Length = 304
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 32/184 (17%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRS--NGM 191
ND R + LY++L +V D A + A+ +E A Y K S N
Sbjct: 140 NDRVRNACLKLLYNSL-EVQDHAEPQTVF---------ASAMKIEEAAYTKIGASTTNND 189
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMAS-------DKIQLWNHH 244
Y+ K R L N+ D N + R+KVL GH+ P ++ M ++E+AS + I+ N H
Sbjct: 190 YRGKVRSLSLNLKDKNNPELRQKVLEGHIDPGMLVVMRSEELASKSLKEQQESIRQQNLH 249
Query: 245 LDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNC 303
K G + +D ++CG+C K YQ + D +T VTC+NC
Sbjct: 250 NAK------------GAEAQEAETDAFQCGKCKQRKTRYYQMQTRSADEPMTTFVTCVNC 297
Query: 304 NQYW 307
N W
Sbjct: 298 NHKW 301
>gi|341879127|gb|EGT35062.1| hypothetical protein CAEBREN_12817 [Caenorhabditis brenneri]
Length = 309
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 128/309 (41%), Gaps = 40/309 (12%)
Query: 20 VWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISS 78
+ + G+ CI LD++ ++ +++ T + + M K S + I K A ++I
Sbjct: 17 ICQNGMESAEDCIKLLDELAKIPMSVEIIQKTNIGIKVNTMRKKVSDEAIAKRAKNIIKE 76
Query: 79 WRDM------CWDVEDVEYVAVTKKAKLVENVKVE-----------EVTNGEE--RRHDS 119
W+++ D D A ++ + VE K E E +N E + S
Sbjct: 77 WKNIVDGKGKSQDDGDAPPPAKKQRKESVEAPKPEKKKLEAPFKRPEPSNRPEIVAQFAS 136
Query: 120 GNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVES 179
P K + ND R + L AL S E DP ++A+ +E
Sbjct: 137 AAFPPKHLE-----NDETRLKSAQLLLSALR--SGEMPQGT-------LDPEELAVQIEE 182
Query: 180 AMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
++ +N Y R +FN+ D +N R VL G V+ E M+++EMAS +I+
Sbjct: 183 KLHSVHRGTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATMTSEEMASPEIR 242
Query: 240 LWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHV 298
K+ L H V ++ SD+++CG+CG +Y Q + D +T V
Sbjct: 243 NMRDKFTKEAIL--EHQMSV---QQGTPSDMFKCGKCGKKNCTYTQLQTRSSDEPMTTFV 297
Query: 299 TCLNCNQYW 307
CL C W
Sbjct: 298 FCLECGNRW 306
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 127/289 (43%), Gaps = 32/289 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++KN IT LL ST+V + + K S +++ LA LI SW+ + DV D +
Sbjct: 27 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKL-LDVSDGK 85
Query: 91 YVAVTKKAKLVENVK--VEEVTNGEERRHDSGNV---------PKKSISCMIKCNDSFRE 139
+ L + T+ ++ D P+ I+C D+ R
Sbjct: 86 SRDQGRGTPLPTSSSKDASGTTDLSCKKPDPPRTSSTPRITTFPQVPITC-----DAVRN 140
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL D A V+ + ++ +E ++ ++ YK + R
Sbjct: 141 KCREMLTLALQTDHDHVAVGVSCE--------HLSSQIEECIFLDVGNTDMKYKNRVRSR 192
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N RR VL G + P+ I M+++EMASD+++ + K+ A+ +
Sbjct: 193 ISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMART 251
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ C +C +Y Q + D +T +V C C W
Sbjct: 252 GGTQ----TDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW 296
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 42/294 (14%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K+ IT LL ST++ + + K + + + LA LI +W+ + ED
Sbjct: 27 MDLLKELKSMPITLHLLQSTRIGMSVNALRKQSTDEDVIALAKSLIKAWKKLLDASEDK- 85
Query: 91 YVAVTKKAKLVENVKVEEVTNGEE----RRHD------------SGNVPKKSISCMIKCN 134
KK + E + ++ +R D VP I+C
Sbjct: 86 --GNEKKRNSLPTSSSRESGDSKDQSSIKRQDLPKTPTTPKITTFPPVP---ITC----- 135
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
D+ R RE L AL +D A + +D C+ ++A +E +Y+ ++ YK
Sbjct: 136 DTVRSKCREMLTSALQTDNDYVA--IGVD----CE--EMAAQIEEFIYQDVKNTDLKYKN 187
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+ R + N+ D +N D R+ VL G + PE I M+++EMAS++++ + K+ A+
Sbjct: 188 RVRSRISNLKDSKNPDLRKNVLCGVITPEQIAVMTSEEMASNELKEIRKAMTKE-AIREH 246
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 247 QMAKTGGTQ----TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|169602463|ref|XP_001794653.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
gi|111066873|gb|EAT87993.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 112/277 (40%), Gaps = 33/277 (11%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKK------ 97
T LL T++ + + H +Q+LA +L+S WRD +V+ K
Sbjct: 42 TEDLLRQTRIGVTINRLRTHKDPAVQRLATELVSKWRD---EVKKGPKKGTPSKIANGSA 98
Query: 98 -AKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCN-----DSFREIVREKLYDALSK 151
+ ++++HD P K K N R+ +YD L+
Sbjct: 99 SPAPPPSGTASPAPAQQKKKHDV--APDKRNHKTDKVNYNVTGHEARDGCVRLMYDGLAF 156
Query: 152 VSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDF 211
+S+ D D I VA VE+A Y N YK K R L N+ + N
Sbjct: 157 MSEALPD----------DIITVAKHVEAAAYGNAGSVNDAYKQKMRSLFQNLKNKSNPAL 206
Query: 212 RRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIY 271
R+ VL G ++P+ + MS EM SD + + L+K+ + + V S +S +
Sbjct: 207 RKDVLSGKIQPKKFVVMSHDEMKSDSRRAEDEKLEKEN-MNQAMVAQVEKS----ISKEF 261
Query: 272 ECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+CG+C +SY + D +T C+NC W
Sbjct: 262 QCGKCKKKMVSYSQAQTRSADEPMTTFCECMNCGNRW 298
>gi|302658771|ref|XP_003021085.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
gi|291184964|gb|EFE40467.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
Length = 297
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 28/274 (10%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL ST++ + + +H S + +L+ +++S WR + + K N
Sbjct: 40 TEDLLRSTKIGIIVNRLKQHKSPDVARLSSEIVSKWRAEVNKQKKTASPGSSDSPKPTPN 99
Query: 104 VKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREI-VREK----LYDALSKVSDEAAD 158
+ ++ S P K + N S + R+ +YD L S E++
Sbjct: 100 GTGTPASATNDKAQSSNVPPDKRNWKADQVNTSVTGVKARDSCIGLMYDGLCLGSTESSQ 159
Query: 159 KVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFRRKVLL 217
V ++ A VE+A ++ + S +Y+ K R L N+ + N R +VL
Sbjct: 160 AV----------LRKAAEVEAAAFKAFGPESKEVYRTKMRSLFQNLKNTSNLSLRTRVLT 209
Query: 218 GHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDIYECG 274
V PE +NM+ +E+ SD+ + + + K D A+ VG + I S +CG
Sbjct: 210 NEVTPERFVNMTHEELKSDERREEDRKIQKENMDKAM-------VGQPERSI-SKSLQCG 261
Query: 275 RCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+CG K++Y + D +T TCL C + W
Sbjct: 262 KCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSW 295
>gi|260949205|ref|XP_002618899.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
gi|238846471|gb|EEQ35935.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
Length = 309
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSNGMYKFKYRCLLFNI 203
LY AL+ D+ D TI +++A +ES +++ ++ N Y+ + R N+
Sbjct: 157 LYTALAIERDD--DSKTI--------LRIATEIESEVFKSEYSNVNDNYRNRLRTFTMNL 206
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLS 262
+ +N + R ++L G + P + I M+ EMA + ++ L K ++F G +
Sbjct: 207 RNKKNPELRARLLSGQITPSSFIKMTPNEMAPEALKKEIEKLHKQ------NLFDAQGAT 260
Query: 263 RKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
K V+D + CG+C H K+S YQ + D LT TC NC W
Sbjct: 261 EKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRW 306
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 126/293 (43%), Gaps = 30/293 (10%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCW------ 84
+D L ++K +T LL ST+V + + K S +++ LA LI SW+ +
Sbjct: 4 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKLLALPSFLA 63
Query: 85 --DVEDVEYVAVTKKAKLVENVKVE--EVTNGEERRHDSGNVPKKS-----ISCMIKCND 135
D D + + L + E E + +R + +P + C D
Sbjct: 64 PVDASDAKARERRRGGSLPTSSSKEASEAQDPSRKRPELPRMPSTPRITTFPPVPVTC-D 122
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
+ R RE L AL +D D V I C Q+ E ++ ++ YK +
Sbjct: 123 AVRTKCREMLTAALQ--TDH--DHVAIGADCECLAGQIE---EYILFRDVGNTDMKYKNR 175
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R L N+ D +N RRKVL G + P+ I M+++EMASD+++ + K+ A+
Sbjct: 176 VRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQ 234
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 235 MARTGGTQ----TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 283
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 23/262 (8%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K +T LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 2 VDLLRELKAMPVTLNLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASDAK 60
Query: 91 YVAVTKKAKLVENVKVE--EVTNGEERRHDSGNVPKKS-----ISCMIKCNDSFREIVRE 143
++ L + E E + +R + +P + C D+ R RE
Sbjct: 61 AREQSRGGPLPPSSSKEPPEAKDPSRKRPELPRMPSAPRITTFPPAPVTC-DAVRNKCRE 119
Query: 144 KLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNI 203
L AL D A V D C+ + I E ++ ++ YK + R + N+
Sbjct: 120 MLAAALRTDHDHMA--VGAD----CEGLSAQI--EECIFRDVGNTDMKYKNRVRSRISNL 171
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSR 263
D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++
Sbjct: 172 KDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ 230
Query: 264 KIIVSDIYECGRCGHNKISYQH 285
+D++ CG+C +Y
Sbjct: 231 ----TDLFTCGKCRRKNCTYTQ 248
>gi|330921683|ref|XP_003299524.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
gi|311326749|gb|EFQ92363.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
Length = 306
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 30/278 (10%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA----- 98
T LL ST++ + + +H +QKLA +L+S WRD + + K A
Sbjct: 42 TEDLLRSTRIGVTINRLRQHKDPAVQKLATELVSKWRDEVKKKQQPKKDGAVKVAANGGA 101
Query: 99 ----KLVENVKVEEVTNGEERRHD----SGNVPKKSISCMIKCNDSFREIVREKLYDALS 150
+ V + +++HD N ++ + +++ VR +YD L+
Sbjct: 102 ASSPAPPASGTVSPAPSQAKKKHDVPADKRNHKTDNVKYQVTGSEARDACVR-LMYDGLA 160
Query: 151 KVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQD 210
+S+ D++ + VA VE+A Y N YK K R L N+ N
Sbjct: 161 YMSEAMPDEILL----------VAKQVEAAAYTNAGSVNDAYKAKMRSLFQNLKSKSNPA 210
Query: 211 FRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDI 270
R++VL+G V + + M+ EM SD+ + + L + + + V + +S
Sbjct: 211 LRKRVLIGEVPAKRFVVMTHDEMKSDERRALDEKLKAEN-MNEAMVAQV----EKAISKE 265
Query: 271 YECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
++C +C +SY + D +T C+NC W
Sbjct: 266 FQCSKCKKKMVSYSQAQTRSADEPMTTFCECMNCGNRW 303
>gi|170579780|ref|XP_001894980.1| transcription elongation factor S-II (TFIIS) [Brugia malayi]
gi|158598237|gb|EDP36172.1| transcription elongation factor S-II (TFIIS), putative [Brugia
malayi]
Length = 305
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP ++AI E ++E ++ Y+ R +FN+ D +N R VL+G V PE M
Sbjct: 168 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 227
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+A EMASD+++ K + + V ++ SD+++CG+CG +Y Q +
Sbjct: 228 TADEMASDEMKAQREKFTKQA--IEEYQMAV---QEGTPSDMFKCGKCGKKNCTYTQVQT 282
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 283 RSADEPMTTFVFCRECGNRW 302
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPI-QVAILVESAMYEKWCRSNGMYK 193
D + VR K + L+K +K + C P ++A +E ++Y ++ + YK
Sbjct: 143 DDTSDPVRIKCRELLTKALQTPPEK------EGCAPACELAAGIEQSIYNEFKNTEMKYK 196
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ D +N R V+ G + PE + +M+++EMASD ++ K+ +
Sbjct: 197 TRVRSRVANLRDSKNPKLREGVMYGFIPPERMASMTSEEMASDDLKKLREKFTKEA--IN 254
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
H + +D ++CGRCG + Y Q + D +T V C++C W
Sbjct: 255 DHQM---AQQGGTETDFFKCGRCGKRRCQYNQVQTRSADEPMTTFVLCVSCGNRW 306
>gi|290462619|gb|ADD24357.1| Transcription elongation factor S-II [Lepeophtheirus salmonis]
Length = 291
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 130/291 (44%), Gaps = 29/291 (9%)
Query: 24 GVVEEARCIDALDQIKNSSITYQLLVSTQV---IRHLLPMLKHPSQKIQKLAYDLISSWR 80
G + ++ +D L + I +L ST+V + +L K +++ +A LI +W+
Sbjct: 20 GSRDGSQALDLLKVLGRLKINLTILTSTRVGMTVNNLRKTSKE--EEVVTVAKSLIKTWK 77
Query: 81 DMCWDVEDVEYVAVTKKAKLVENVKVEE--VTNGEERRHDSGNVPKKSISCMIKCNDSFR 138
+ D + +++K + K E +NG S + P+K+ I D R
Sbjct: 78 KFVPENSDKKKKDSEEESKKSPHSKEESNAKSNGL-----SKSFPQKT---NIATTDDVR 129
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKAC-DPIQVAILVESAMYEKWCRSNGMYKFKYR 197
RE L +AL + + D + C P ++A L+E A++ + ++ YK + R
Sbjct: 130 LRCREMLTNALKGIGSDLPDGI-------CKSPEELADLIEEAIFSNFKSTSAKYKNQIR 182
Query: 198 CLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIF 257
+FN+ D +N R VL G ++P M+A EMAS++++ K G + +
Sbjct: 183 SRVFNLKDKKNPALRENVLTGIIEPSKFAVMTADEMASNEVKKQRADFVKQG-IDASQLA 241
Query: 258 PVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ ++ +D+ +CG+C +Y Q + D +T V C C W
Sbjct: 242 QIQGTK----TDLLKCGKCLKRNCTYNQIQTRSADEPMTTFVLCNECGNRW 288
>gi|256071836|ref|XP_002572244.1| transcription elongation factor s-II [Schistosoma mansoni]
gi|360043833|emb|CCD81379.1| putative transcription elongation factor s-II [Schistosoma mansoni]
Length = 318
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+AI +ES++Y+ + ++ YK + R + N+ D N + R VL+GHV P+ + +M+++E
Sbjct: 185 LAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEE 244
Query: 233 MASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDD 291
MAS +++ K+ + H V + +D+ CG+C K +Y Q + D
Sbjct: 245 MASKEMKELREKYTKE--TIEDHQMAVTGGTE---TDLLRCGKCKQTKCTYNQVQTRSAD 299
Query: 292 YNLTRHVTCLNCNQYW 307
+T V C NC W
Sbjct: 300 EPMTTFVYCNNCGHRW 315
>gi|326472154|gb|EGD96163.1| transcription elongation factor S-II [Trichophyton tonsurans CBS
112818]
gi|326476985|gb|EGE00995.1| transcription elongation factor S-II [Trichophyton equinum CBS
127.97]
Length = 297
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 38/279 (13%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL ST++ + + +H + + +L+ +++S WR + + K N
Sbjct: 40 TEDLLRSTKIGIIVNRLKQHKAPDVARLSSEIVSKWRAEVNKQKKTASPGSSDSPKPTPN 99
Query: 104 VKVEEVTNGEERRHDSGNVPKKSIS----------CMIKCNDSFREIVREKLYDALSKVS 153
+ ++ S NVP S +K DS + +YD L S
Sbjct: 100 GTSTPASAANDKAQSS-NVPPDKRSWKADQVNTSVTGVKARDSCVGL----MYDGLCLGS 154
Query: 154 DEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFR 212
E++ V L KA D VE+A ++ + + Y+ K R L N+ + N R
Sbjct: 155 TESSQAV---LRKATD-------VEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLR 204
Query: 213 RKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSD 269
+VL V PE +NM+ +E+ SD+ + + + K D A+ VG + I S
Sbjct: 205 TRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENMDKAM-------VGQPERSI-SK 256
Query: 270 IYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+CG+CG K++Y + D +T TCL C + W
Sbjct: 257 SLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSW 295
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 23/297 (7%)
Query: 20 VWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ-KIQKLAYDLISS 78
+ K G + +D L ++K+ IT LL ST++ + + K + ++ LA LI S
Sbjct: 80 ILKNGKPFQDGAVDLLKELKSMPITLDLLQSTRIGMSVNALRKQSTDDEVISLAKSLIKS 139
Query: 79 WRDMCWDVEDV-------EYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMI 131
W+ + E+ Y+ + + + E + + I
Sbjct: 140 WKKLLDASEERNDEKKKNSYLPKSSSKDATDTKDQSAIKKQESPKTPTTPKITTFPPVPI 199
Query: 132 KCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM 191
C D+ R RE L AL +D I + C+ ++ +E +Y+ ++
Sbjct: 200 TC-DAVRNKCREMLTAALQTDNDH------IAIGTDCE--HLSAQIEEYIYQDVKNTDMK 250
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK + R + N+ D +N D R+ VL G + PE I M+++EMAS++++ + K+ A+
Sbjct: 251 YKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKE-AI 309
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 310 REHQMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 362
>gi|126342557|ref|XP_001363001.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
+DS R RE L AL + D D + I D ++ +E A+Y++ ++ YK
Sbjct: 116 SDSVRMKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQELRNTDMKYK 167
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 168 NRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEIRKNLTKE-AIRE 226
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 227 HQMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 277
>gi|322694712|gb|EFY86534.1| transcription elongation factor s-ii [Metarhizium acridum CQMa 102]
Length = 303
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 32/286 (11%)
Query: 39 KNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA 98
K++ T ++L +T+ + + +P+++I + A +L+ W+ + + E + ++
Sbjct: 35 KDAKPTEEMLRATKAGVFVAKLRANPNKEIARSAAELVIKWKKLV----EQEKASRAQRP 90
Query: 99 KLVENVKV-------EEVTNGEERRHDSGNVPKKSISC----MIKCNDSFREIVREKLYD 147
K+ + + +R +G+ K+S + + + + R+ +Y+
Sbjct: 91 KMGSPAAAPASSPVPQACSAAGAKRAFTGDPEKRSFTADGVELKRTSSGVRDRCIGLIYN 150
Query: 148 ALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNG-MYKFKYRCLLFNISDP 206
L+ S E++D D I A+ VE A++ ++ G YK K R L N+
Sbjct: 151 GLAYRSTESSD----------DVIARAVAVEHAVFVEFKEDEGEGYKKKIRSLFANLKTK 200
Query: 207 ENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKII 266
N+D ++V+ G + PE M+ +E+ S+ + L+K+ V ++ K I
Sbjct: 201 SNKDLGKRVMSGDILPEKFAKMTDEELKSEDQRKKEIELEKENM----KRAQVPMAEKSI 256
Query: 267 VSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYWVSTN 311
SD EC RC K+SY Q + D +T C+NC W T
Sbjct: 257 -SDSLECSRCKMKKVSYTQAQTRSADEPMTTFCECMNCGHRWKGTQ 301
>gi|384484057|gb|EIE76237.1| transcription elongation factor S-II [Rhizopus delemar RA 99-880]
Length = 304
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 6/138 (4%)
Query: 171 IQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
++ A+ +E+ +++++ N YK K R L N+ N R V+ G + E + MS
Sbjct: 169 LKRALAIETRIFDEYGSVNEGYKSKVRTLANNLKSKSNPGLRESVVSGELTIEKLCTMSV 228
Query: 231 KEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSIL 289
+EMAS++ Q + L ++ AL G + +D+++CG+C K +Y Q +
Sbjct: 229 EEMASEEAQARDRKLAEE-ALFKAR----GATSAQAETDMFKCGKCQGRKCTYFQMQTRS 283
Query: 290 DDYNLTRHVTCLNCNQYW 307
D +T VTC+NC +W
Sbjct: 284 ADEPMTTFVTCVNCGNHW 301
>gi|393904020|gb|EJD73631.1| transcription elongation factor S-II [Loa loa]
Length = 310
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP ++A+ E ++E ++ Y+ R +FN+ D +N R VL+G V PE M
Sbjct: 173 DPEELAVRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 232
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+A EMASD+++ K + + V ++ SD+++CG+CG +Y Q +
Sbjct: 233 TADEMASDEMKAQREKFTKQA--IEEYQMAV---QEGTPSDMFKCGKCGKKNCTYTQVQT 287
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 288 RSADEPMTTFVFCRECGNRW 307
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 128/290 (44%), Gaps = 33/290 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K+ +T LL ST++ + + K + +++ LA LI SW+ + E E
Sbjct: 27 MDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKLLDASE--E 84
Query: 91 YVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSIS------------CMIKCNDSFR 138
KK+ + E N R S N ++ I C D+ R
Sbjct: 85 KNEDKKKSLSLPTSSSRETGNS---RDQSSNKRQEPPKTPTTPKITTFPPAPITC-DAVR 140
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
RE L AL AD I + C+ +A +E +Y+ ++ YK + R
Sbjct: 141 NKCREMLTAALQ------ADDDYIAIGADCE--HIAAQIEECIYQDVKNTDMKYKNRVRS 192
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ N+ D +N + ++ VL G + PE I M+++EMAS++++ + K+ A+ +
Sbjct: 193 RISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKE-AIREHQMAK 251
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 252 TGGTQ----TDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 297
>gi|225710958|gb|ACO11325.1| Transcription elongation factor S-II [Caligus rogercresseyi]
Length = 299
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Query: 102 ENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVT 161
+N K NG + G VPK S I D R RE + +AL +D T
Sbjct: 106 DNAKGGSSGNGPAPK---GFVPK---STNIGTTDDVRLRCREMISNALKGTTDAGLPDGT 159
Query: 162 IDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVK 221
+ P + L+E A++ + ++ YK + R +FN+ D +N R VL G +
Sbjct: 160 VK-----PPEEFGDLIEEAIFSNFKSTSAKYKNQIRSRVFNLRDKKNPALRENVLTGIID 214
Query: 222 PETIINMSAKEMASDKIQLWNHHLDKDG--ALVTGHIFPVGLSRKIIVSDIYECGRCGHN 279
P M+A EMASD+I+ K G A HI + +D+ +CG+C +
Sbjct: 215 PPKFAVMTADEMASDEIKNQRAAFVKQGIDASQLAHI-------QGTKTDLLKCGKCKQS 267
Query: 280 KISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+Y Q + D + V C C W
Sbjct: 268 NCTYNQIQTRSADEPMATFVLCNECGNRW 296
>gi|389743667|gb|EIM84851.1| transcription elongation factor [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 123/292 (42%), Gaps = 35/292 (11%)
Query: 32 IDALDQIKNSS-ITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVE 90
ID L +K + IT +L ++ + + H ++++ +LA +++ W+ +V+ +
Sbjct: 24 IDVLQVLKKEAKITEAILRESKAGLAVGKLRSHATKEVSELAKEVVRQWK---TEVDKEK 80
Query: 91 YVAVTKKAKLVENVKVEEVTNG-----EERRHDSGNVPKKSISCMIKCN----DSFREIV 141
A K L N G++ S + K + D R+
Sbjct: 81 KAAGAKSPVLNGKPAAPSRKNSVATPTTPTVSTPGSISNGSTTRTTKTDGINTDVTRDKT 140
Query: 142 REK----LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYR 197
R+K LYDAL+ S ++ + Q A E A++ + + G YK K R
Sbjct: 141 RDKCIELLYDALAFDSGAPSELI----------FQRAKAAEDAVFHTFNGTTGDYKTKIR 190
Query: 198 CLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIF 257
L+ N+ D +N R V+ G + + M++++MAS+ + D + ++F
Sbjct: 191 SLVVNLKDKKNPGLRESVVSGDLPAAKLAKMTSQDMASE------ERKNADKKIKEENMF 244
Query: 258 -PVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+G + +D ++CGRC K Y+ + D +T VTC CN W
Sbjct: 245 KALGAEEQQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRW 296
>gi|449544753|gb|EMD35725.1| hypothetical protein CERSUDRAFT_115683 [Ceriporiopsis subvermispora
B]
Length = 306
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
D R+ E +YDAL+ S ++++ + A +ES + ++ +N YK
Sbjct: 144 GDKTRDKCAELIYDALAFDSGAPSEQI----------LSRAKAIESTVLSQFNGTNAEYK 193
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
K R L N+ D N R V+ G + + MS++EMAS++ + D ++
Sbjct: 194 AKIRSLFVNLKDKNNPSLRESVVAGDLPVQRFCKMSSQEMASEERKAA------DNRIME 247
Query: 254 GHIF-PVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
++F +G +D ++CGRC K Y+ + D +T VTC CN W
Sbjct: 248 ENLFKSLGAEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRW 303
>gi|322712025|gb|EFZ03598.1| transcription elongation factor S-II [Metarhizium anisopliae ARSEF
23]
Length = 300
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 26/279 (9%)
Query: 39 KNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA 98
K++ T ++L +T+ + + +P+++I + A +L+ W+ + + E K
Sbjct: 35 KDAKPTEEMLRATKAGVFVAKLRANPNKEIARSAAELVIKWKKLV-EQEKASRAQRPKMG 93
Query: 99 KLVENVKVEEVTNGEE----RRHDSGNVPKKSISC----MIKCNDSFREIVREKLYDALS 150
V ++ +G+ K+S + + + + R+ +Y+ L+
Sbjct: 94 SPAAAPASSPVPQAGSATGAKKAFTGDPEKRSFTADGVELKRTSSGVRDRCIGLIYNGLA 153
Query: 151 KVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNG-MYKFKYRCLLFNISDPENQ 209
S E+ D D I A+ VE A++ ++ G YK K R L N+ N+
Sbjct: 154 YRSTESPD----------DVIARAVAVEHAVFIEFKEDEGEGYKKKIRSLFANLKTKSNK 203
Query: 210 DFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSD 269
D ++V+ G + PE M+ +E+ S+ + L+K+ V ++ K I SD
Sbjct: 204 DLGKRVMSGDISPEKFAKMTDEELKSEDQRKKEIELEKENM----KRAQVPMAEKSI-SD 258
Query: 270 IYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
ECGRC K+SY Q + D +T C+NC W
Sbjct: 259 SLECGRCKMKKVSYTQAQTRSADEPMTTFCECMNCGHRW 297
>gi|358390984|gb|EHK40389.1| hypothetical protein TRIATDRAFT_302747 [Trichoderma atroviride IMI
206040]
Length = 305
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
D I A+ VE A + YK K R L N+ + N+D ++V+ G + PE +NM
Sbjct: 168 DVIARAVAVEHAAFTTLKGETPEYKKKIRSLFTNLKNKSNRDLGKQVMAGDISPEKFVNM 227
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ +E+ S+ + L+K+ V ++ K I SD ECG+C ++SY Q +
Sbjct: 228 TDEELKSEDQRKMELELEKENM----KKAQVPMAEKSI-SDSLECGKCKKKRVSYTQAQT 282
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T C+NC W
Sbjct: 283 RSADEPMTTFCECMNCGNRW 302
>gi|149244436|ref|XP_001526761.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449155|gb|EDK43411.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 322
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 171 IQVAILVESAMYE-KWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
+ VA +ESA+++ ++ + N Y+ K R + + + +N + R ++L + E I MS
Sbjct: 186 VAVAAEIESAVFKNEYLKVNEAYRNKLRTFVMQLRNKKNPELRERLLTRQITAERFIKMS 245
Query: 230 AKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSS 287
EMA ++++ + K ++F G + K V+D + CG+C H K+S YQ +
Sbjct: 246 PNEMAPEELKKEIEKMHKQ------NLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 299
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D LT TC NC W
Sbjct: 300 RSADEPLTTFCTCENCGNRW 319
>gi|402588846|gb|EJW82779.1| hypothetical protein WUBG_06311 [Wuchereria bancrofti]
Length = 154
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP ++AI E ++E ++ Y+ R +FN+ D +N R VL+G V PE M
Sbjct: 17 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 76
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+A EMASD+++ K + + V ++ SD+++CG+CG +Y Q +
Sbjct: 77 TADEMASDEMKAQREKFTKQA--IEEYQMAV---QEGTPSDMFKCGKCGKKNCTYTQVQT 131
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 132 RSADEPMTTFVFCRECGNRW 151
>gi|393220677|gb|EJD06163.1| transcription elongation factor [Fomitiporia mediterranea MF3/22]
Length = 296
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 123/290 (42%), Gaps = 34/290 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLK-HPSQKIQKLAYDLISSWRDMCWDVEDVE 90
ID L +K + + L+ I + L+ + S+++ LA +L+ W++ +
Sbjct: 24 IDILHLLKKDVVASESLLRESRIGLAVGKLRSNVSKEVADLAKELVKKWKNEVGGSKGSS 83
Query: 91 YVAV----------TKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIK-CNDSFRE 139
A +KA + E+V G S K+ +I D R+
Sbjct: 84 GPATHHNAVAKPIPVRKASVAESVGSPTTPTGSSFARSS-----KTDGVVINVTKDKTRD 138
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YKFKYRC 198
E +YD+L V D AA DL+ ++ A +ES + E G YK K R
Sbjct: 139 KCIELIYDSL--VLDSAAPS---DLI-----LKRATAIESTVLEDHNNDTGKEYKGKIRS 188
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
L N+ D N R ++ G ++ MS++EMAS++ + + + ++ +
Sbjct: 189 LFLNLKDKNNPGLRANIVSGELEVAKFCRMSSQEMASEERKAADKAIQEENFYKS----- 243
Query: 259 VGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+G + +D ++CG+C K Y+ + D +T VTC+NCN W
Sbjct: 244 LGAEEQQAETDAFQCGKCKQRKTRYRQAQTRSADEPMTTFVTCVNCNHRW 293
>gi|312088616|ref|XP_003145930.1| hypothetical protein LOAG_10358 [Loa loa]
Length = 241
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP ++A+ E ++E ++ Y+ R +FN+ D +N R VL+G V PE M
Sbjct: 104 DPEELAVRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 163
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+A EMASD+++ K + + V ++ SD+++CG+CG +Y Q +
Sbjct: 164 TADEMASDEMKAQREKFTKQA--IEEYQMAV---QEGTPSDMFKCGKCGKKNCTYTQVQT 218
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 219 RSADEPMTTFVFCRECGNRW 238
>gi|126303931|ref|XP_001375763.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 167 ACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETII 226
D ++ +E A+Y++ ++ YK + R + N+ D +N + R+ VL G++ P+
Sbjct: 141 GADEEELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFA 200
Query: 227 NMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QH 285
M+A+EMASD+++ + +L K+ A+ + G ++ +D++ CG+C +Y Q
Sbjct: 201 RMTAEEMASDELKEMHKNLTKE-AIREHQMAKTGGTQ----TDLFTCGKCKKKNCTYTQV 255
Query: 286 SSILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 256 QTRSADEPMTTFVVCNECGNRW 277
>gi|344272860|ref|XP_003408247.1| PREDICTED: transcription elongation factor A protein 1-like
[Loxodonta africana]
Length = 380
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 24/279 (8%)
Query: 47 LLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMC------WDVEDVEYVAVTKKAK 99
+L ST++ + + K + +++ LA LI SW+ + D E+ +
Sbjct: 54 VLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDSEEKKKEPAITSQN 113
Query: 100 LVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC---NDSFREIVREKLYDALSKVSDEA 156
E + + R D N +S + +DS R RE + AL + D
Sbjct: 114 SPEAREESSSSGNVSSRKDETNTRDTYVSSFPRAPNTSDSVRLKCREMIAAAL-RTGD-- 170
Query: 157 ADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVL 216
D + I D ++ +E A+Y++ ++ YK + R + N+ D +N + R+ VL
Sbjct: 171 -DYIAI----GADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVL 225
Query: 217 LGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRC 276
G++ P+ M+A+EMASD+++ +L K+ A+ + G ++ +D++ CG+C
Sbjct: 226 CGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAKTGGTQ----TDLFTCGKC 280
Query: 277 GHNKISY-QHSSILDDYNLTRHVTCLNCNQYWVSTNLSF 314
+Y Q + D +T V C C W + F
Sbjct: 281 KKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKMSEAPF 319
>gi|346466499|gb|AEO33094.1| hypothetical protein [Amblyomma maculatum]
Length = 313
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 163 DLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKP 222
D+ C+ +A +E ++Y ++ +N YK + R + N+ D N R VL G + P
Sbjct: 170 DMPDGCNVDGLAAKIEESIYNEFGDTNMKYKNRVRSRVSNLKDSRNPALRLNVLHGAIDP 229
Query: 223 ETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS 282
E I MSA+EMASD+++ K+ + H V K +D+ +CG+C N +
Sbjct: 230 ERIARMSAEEMASDEMKELRQRFTKES--INDHQMAVTGGTK---TDLLKCGKCRKNNCT 284
Query: 283 Y-QHSSILDDYNLTRHVTCLNCNQYW 307
Y Q + D +T C C W
Sbjct: 285 YNQVQTRSADEPMTTFCYCNECGHRW 310
>gi|126342513|ref|XP_001362316.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
+DS R RE L AL + D D + I D ++ +E A+Y++ ++ YK
Sbjct: 116 SDSVRMKCREMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAIYQELRNTDMKYK 167
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ D +N + R+ VL G++ P+ ++A+EMASD+++ +L K+ A+
Sbjct: 168 NRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARLTAEEMASDELKEMRKNLTKE-AIRE 226
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 227 HQMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 277
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 133/284 (46%), Gaps = 33/284 (11%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDV 86
+A +D L ++KN +T +LL ST++ + + K + +++ LA LI SW+
Sbjct: 106 KAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWK------ 159
Query: 87 EDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLY 146
KL++ ++ + EE++ D+ + S + + S R++
Sbjct: 160 ------------KLLDGPSTDK--DPEEKKKDTTITSQNSPEAREESSSSGSVSSRKEET 205
Query: 147 DAL-SKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YKFKYRCLLFNIS 204
+A + VS T D V+ ++ ++ +A+ R+ M YK + R + N+
Sbjct: 206 NARDTYVSSFPRAPSTSDSVR----LKCREMLAAALRTGEIRNTDMKYKNRVRSRISNLK 261
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+ + G ++
Sbjct: 262 DAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAKTGGTQ- 319
Query: 265 IIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+D++ CG+C +Y Q + D +T V C C W
Sbjct: 320 ---TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 360
>gi|91833|pir||JX0167 transcription elongation factor S-II-related protein L121, hepatic
- mouse
Length = 235
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
DS R RE L AL + D D V I D ++ +E A+Y++ ++ YK
Sbjct: 72 DSVRLKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKN 123
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+ R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 124 RVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREH 182
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 183 QMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 232
>gi|220592|dbj|BAA00768.1| unnamed protein product [Mus musculus]
Length = 235
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
DS R RE L AL + D D V I D ++ +E A+Y++ ++ YK
Sbjct: 72 DSVRLKCREMLAAAL-RTGD---DYVAI----GADEEELGSQIEEAIYQEIRNTDMKYKN 123
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+ R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 124 RVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREH 182
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 183 QMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 232
>gi|213406231|ref|XP_002173887.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
gi|212001934|gb|EEB07594.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
Length = 296
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
LY+AL+ +DE + L+K I V +L S +++ Y+ K R L N+
Sbjct: 144 LYNALAMDTDEPSSV----LLKTASAIDVQVLSMS-----MGKTDSAYRNKMRSLYMNLK 194
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSR 263
D +N R++V+ G + P+ + MS+ E+AS+ +D L ++F G
Sbjct: 195 DKQNPQLRKRVISGAISPKRLSEMSSAELASE------DRRKEDAKLEQENLFHAQGAKP 248
Query: 264 KIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ ++D++ CG+C K+SY Q + D +T C C W
Sbjct: 249 QKAITDLFTCGKCKQKKVSYFQMQTRSADEPMTTFCECTVCGNRW 293
>gi|169867242|ref|XP_001840202.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
gi|116498754|gb|EAU81649.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
Length = 298
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 131/320 (40%), Gaps = 38/320 (11%)
Query: 1 MEKKVMDLCEAAKRAAVAAVWKEGVVEEARCIDALDQIKNS-SITYQLLVSTQVIRHLLP 59
M K V++L + K + AA G E I L +KN +T Q+L ++ +
Sbjct: 1 MSKDVVELKKNVKALSQAA----GAKNEGDIISILKILKNEFDVTEQILRESKAGLAVGK 56
Query: 60 MLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDS 119
+ H S++I LA +++ W+ V+ + T A N + G ++
Sbjct: 57 LRSHDSKEISTLAKEIVRKWKTA---VDKQKGGKTTSAASTPTNAAPKPAATGTGSSNNK 113
Query: 120 GNVPK--------KSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPI 171
P KS + D R+ E LYDAL+ SD A I++V +
Sbjct: 114 APTPTSAGPLRTAKSDGVTGRTGDKVRDKCVELLYDALA--SDSTA---PIEMV-----L 163
Query: 172 QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAK 231
+ A VE A++ +N Y+ K R L N+ D N + ++ G + M+++
Sbjct: 164 KRASEVEEAVFNLKGGANQEYRGKIRSLYVNLKDKNNPTLKEDIVSGEIPASRFAVMTSE 223
Query: 232 EMASD--KIQLWNHHLDKDGALVTGHIF-PVGLSRKIIVSDIYECGRCGHNKISYQHSSI 288
EMAS+ K L H + ++F + +D ++C +C K Y+ +
Sbjct: 224 EMASEEQKAALKKIHEE--------NLFKSLAAQEADAETDAFQCSKCKQRKCRYRQAQT 275
Query: 289 LD-DYNLTRHVTCLNCNQYW 307
D +T VTC+ C W
Sbjct: 276 RSADEPMTTFVTCVVCGNRW 295
>gi|68486327|ref|XP_712962.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|68486518|ref|XP_712868.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434285|gb|EAK93699.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434386|gb|EAK93797.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|238879330|gb|EEQ42968.1| hypothetical protein CAWG_01194 [Candida albicans WO-1]
Length = 305
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 171 IQVAILVESAMYE-KWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
+++AI +E+ +Y+ ++ + + Y+ + R N+ + +N + R ++L + P I M+
Sbjct: 169 LRIAIEIEAEVYKSEYSKVSDSYRNRLRSFTMNLRNKKNPELRERILSKQILPAAFIKMT 228
Query: 230 AKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSS 287
EMA + ++ L K ++F G + K V+D + CG+C H K+S YQ +
Sbjct: 229 PNEMAPEALKKEIEKLHKQ------NLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 282
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D LT TC NC W
Sbjct: 283 RSADEPLTTFCTCENCGNRW 302
>gi|405958419|gb|EKC24549.1| Transcription elongation factor A protein 1 [Crassostrea gigas]
Length = 369
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
ND R RE L +L V DE +V + + A P ++A +E +++ ++ ++ YK
Sbjct: 130 NDPVRIKCRELLASSL--VLDE---EVKVRIPNAQCPKELAAKIEDSIHLEFKNTDQKYK 184
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ D +N + V++G + PE I NMSA+EMASD+++ K+ +
Sbjct: 185 ARIRSRVANLKDKKNPKLKEGVIMGLIPPERIANMSAEEMASDEMRQLRAKFTKES--ID 242
Query: 254 GHIFPVGLSRK-IIVSDIYECGRCGHNKISYQHSSILDDYNLTR 296
H +SR+ V+D+++CG+CG +Y D+ R
Sbjct: 243 DH----QMSRQEGTVTDLFKCGKCGKKNCTYNQEMASDEMRQLR 282
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 125/285 (43%), Gaps = 23/285 (8%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K+ +T LL ST++ + + K S +++ LA LI SW+ + D + +
Sbjct: 27 MDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSSDEEVIALAKSLIKSWKKL-LDASEEK 85
Query: 91 YVAV-------TKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVRE 143
T +K N + + +E + D+ R RE
Sbjct: 86 SEEKKKNLSLPTSSSKETGNSRDQSSNKRQEPPKTPTTPKITTFPPAPVTCDAVRNKCRE 145
Query: 144 KLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNI 203
L AL AD I + C+ +A +E +Y+ ++ YK + R + N+
Sbjct: 146 MLTTALQ------ADDDYIAIGADCE--HIAAQIEECIYQDIKNTDMKYKNRVRSRISNL 197
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSR 263
D +N + ++ VL G + PE I M+++EMAS++++ + K+ A+ + G ++
Sbjct: 198 KDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKE-AIREHQMAKTGGTQ 256
Query: 264 KIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+D++ CG+C +Y Q + D +T V C C W
Sbjct: 257 ----TDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 297
>gi|50286491|ref|XP_445674.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524979|emb|CAG58585.1| unnamed protein product [Candida glabrata]
Length = 306
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 123/291 (42%), Gaps = 52/291 (17%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKL--- 100
T +LL T+V + K + +I KL +I +W+D + KKAKL
Sbjct: 38 TEKLLRETKVGVEVNKFKKSENAEISKLVKRMIGAWKDA---------INKHKKAKLRQQ 88
Query: 101 ---VENVKVEEVTNGEERRHD---SGNVPKKS---ISCMIKC-----------NDSFREI 140
+ V + +D SG+ P+K+ +S I+ N+ R+
Sbjct: 89 QPPQQGVSASSGGAADGSNNDGAKSGDEPRKTDKFVSSKIRNTKNDGVDPNVHNNKLRDQ 148
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRS--NGMYKFKYRC 198
V LYDAL+K S+ + +Q +I +E M++ S YK KYR
Sbjct: 149 VIRALYDALAKDSEHPPKSI----------LQTSIAIEEEMHKLNDSSIKEKEYKDKYRV 198
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
+ NI N D + K+ G + PE ++N K++A + ++ + K ++F
Sbjct: 199 IYSNIISRNNPDLKVKIANGDLSPEQLVNSDPKDLAPEHLKKKMEEIKKQ------NLFN 252
Query: 259 V-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
G + + V+D + CG+C K+S YQ + D LT TC C W
Sbjct: 253 AQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 303
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 28/287 (9%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K +T LL ST+V + + K S +++ LA LI SW+ + DV D +
Sbjct: 27 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKL-LDVSDGK 85
Query: 91 YVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCM---------IKCNDSFREIV 141
+ L + + T+G P +++S I C D+ R
Sbjct: 86 TRDQGRGTPLPTSSSKD--TSGTTDLSCKKPDPPRTLSTPRITTFPSVPITC-DAVRNKC 142
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLF 201
RE L AL D A V +D C+ + I E ++ ++ YK + R +
Sbjct: 143 REMLTLALQTDHDHKA--VGVD----CEHLSAQI--EECIFLDVGNTDMKYKNRVRSRIS 194
Query: 202 NISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGL 261
N+ D +N RR VL G + P+ I M+++EMASD+++ + K+ A+ + G
Sbjct: 195 NLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGG 253
Query: 262 SRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ +D++ C +C +Y Q + D +T +V C C W
Sbjct: 254 TQ----TDLFTCSKCKKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW 296
>gi|71023611|ref|XP_762035.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
gi|46101600|gb|EAK86833.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
Length = 315
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 173 VAILVESAMYEKWCRSN--GMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
A+ VE+A+ + + Y+ K R L NI D N D R +V+ G + + ++ M+
Sbjct: 180 AAVAVEAAILSNQGKGSVTADYRNKVRSLSLNIKDKNNPDLRVRVVEGDIAADKLVTMTN 239
Query: 231 KEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSI 288
+E+ASDK + L ++F G + + +D ++CGRC K YQ +
Sbjct: 240 EELASDKRKREIEELQ------MQNLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTR 293
Query: 289 LDDYNLTRHVTCLNCNQYW 307
D +T VTC NCN W
Sbjct: 294 SADEPMTTFVTCTNCNHKW 312
>gi|324513389|gb|ADY45503.1| Transcription elongation factor S-II [Ascaris suum]
Length = 301
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP ++AI +E ++E + Y+ R +FN+ D +N R VL G V P M
Sbjct: 164 DPEELAIKIEKKLFEVHRGTGDKYRSAVRSRVFNLRDKKNAALRENVLTGVVTPAKFAVM 223
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+++EMASD+++ K + H V ++ SD+++CG+CG +Y Q +
Sbjct: 224 TSEEMASDEMRSQREKFTKQA--IEEHQMSV---QEGTPSDMFKCGKCGKKNCTYTQVQT 278
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 279 RSADEPMTTFVFCRECGNRW 298
>gi|296805870|ref|XP_002843759.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
gi|238845061|gb|EEQ34723.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
Length = 297
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 38/279 (13%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL ST++ + + +H + ++ +L+ +++S WR + + + K N
Sbjct: 40 TEDLLRSTKIGIIVNRLKQHKAPEVARLSSEIVSKWRAEVNKQKKIASPGSSDSPKPTPN 99
Query: 104 VKVEEVTNGEERRHDSGNVPKKSIS----------CMIKCNDSFREIVREKLYDALSKVS 153
+ +++ S NVP S +K DS + +YD L S
Sbjct: 100 GNSTVASAADDKTQKS-NVPPDKRSWKTDQVNTAVTGVKARDSCIGL----MYDGLCLGS 154
Query: 154 DEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFR 212
E V +Q A VE+A + + + Y+ K R L N+ N R
Sbjct: 155 TETPRAV----------LQKATEVEAAAFNTYGPETKESYRTKIRSLYQNLKQKSNLSLR 204
Query: 213 RKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSD 269
+VL G V P+ ++M+ +E+ SD+ + + + K D A+V G + I S
Sbjct: 205 TRVLTGEVTPDRFVSMTHEELKSDERREEDRKIQKENMDKAMV-------GQPERSI-SK 256
Query: 270 IYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+CG+CG K++Y + D +T TCL C + W
Sbjct: 257 SLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSW 295
>gi|327305353|ref|XP_003237368.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
gi|326460366|gb|EGD85819.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
Length = 297
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 38/279 (13%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL ST++ + + +H + + +L+ +++S WR + + K N
Sbjct: 40 TEDLLRSTKIGIIVNRLKQHKAPDVARLSSEIVSKWRAEVNKQKKTASPGSSDSPKPTPN 99
Query: 104 VKVEEVTNGEERRHDSGNVPKKSIS----------CMIKCNDSFREIVREKLYDALSKVS 153
+ ++ S NVP S +K DS + +YD L S
Sbjct: 100 GTGTPASATNDKAQSS-NVPPDKRSWKADQVSTSVTGVKARDSCLGL----MYDGLCLGS 154
Query: 154 DEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFR 212
E+ V ++ A VE+A ++ + + +Y+ K R L N+ + N R
Sbjct: 155 TESPQAV----------LRKATEVEAAAFKAFGPETKEVYRSKMRSLYQNLKNKSNLSLR 204
Query: 213 RKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSD 269
+VL V PE +NM+ +E+ SD+ + + + K D A+ VG + I S
Sbjct: 205 TRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENMDKAM-------VGQPERSI-SK 256
Query: 270 IYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+CG+CG K++Y + D +T TCL C + W
Sbjct: 257 SLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSW 295
>gi|343427400|emb|CBQ70927.1| related to transcription elongation factor TFIIS [Sporisorium
reilianum SRZ2]
Length = 319
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 173 VAILVESAMYEKWCRS--NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
A+ VE+A+ + Y+ K R L NI D N D R +V+ + +T++ MS
Sbjct: 184 AAVAVEAAILANQGKGAVTTEYRNKVRSLSLNIKDKNNPDLRARVVERDIPADTLVTMSN 243
Query: 231 KEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSI 288
+E+ASDK + L ++F G + + +D ++CGRC K YQ +
Sbjct: 244 EELASDKRKREIEQLQMQ------NLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTR 297
Query: 289 LDDYNLTRHVTCLNCNQYW 307
D +T VTC NCN W
Sbjct: 298 SADEPMTTFVTCTNCNHKW 316
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 33/289 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++KN IT LL ST+V + + K S +++ LA LI SW+ + DV D +
Sbjct: 27 MDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKL-LDVSDGK 85
Query: 91 YVAVTKKAKLVENVK--VEEVTNGEERRHDSGNVPKKS---------ISCMIKCNDSFRE 139
+ L + T+ ++ D P I+C D+ R
Sbjct: 86 SRNQGRGTPLPTSSSKDASRTTDLSCKKPDPPRTPSTPRITTFPQVPITC-----DAVRN 140
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL D A V C+ + I ++ ++ YK + R
Sbjct: 141 KCREMLTLALQTDHDHVAVGVN------CEHLSSQI---EDIFLDVGNTDMKYKNRVRSR 191
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N RR VL G + P+ I M+++EMASD+++ + K+ A+ +
Sbjct: 192 ISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMART 250
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ C +C +Y Q + D +T +V C C W
Sbjct: 251 GGTQ----TDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW 295
>gi|340517178|gb|EGR47423.1| predicted protein [Trichoderma reesei QM6a]
Length = 309
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 171 IQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
I A+ VE+A Y + YK K R L N+ + N+D ++V+ G + PE ++M+
Sbjct: 174 IAKAVAVENAAYTVFNGEGAEYKKKIRSLFANLKNKSNRDLGKRVMSGDIAPERFVSMTD 233
Query: 231 KEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSIL 289
+++ S+ + L+K+ V ++ K I SD ECG+C ++SY Q +
Sbjct: 234 EDLKSEDQRRMELELEKENM----KKAQVPMAEKSI-SDSLECGKCKKKRVSYTQAQTRS 288
Query: 290 DDYNLTRHVTCLNCNQYW 307
D +T C+NC W
Sbjct: 289 ADEPMTTFCECMNCGNRW 306
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K +T LL ST+V + + K S +++ LA LI SW+ + D D +
Sbjct: 28 MDLLRELKAMPVTLHLLQSTRVGMSVNALRKQSSDEEVVTLAKSLIKSWKKL-LDASDAK 86
Query: 91 YVAVTKKAKLVENVKVE--EVTNGEERRHDSGNVPKKS---------ISCMIKCNDSFRE 139
+ L + E E + +R + +P ++C D+ R
Sbjct: 87 ARERRRGGSLPTSSSKEASEAQDPSRKRPELPRMPSTPRITTFPPVPVTC-----DAVRT 141
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL +D D V I C +A +E ++ ++ YK + R
Sbjct: 142 KCREMLTAALQ--TDH--DHVAIGADCEC----LAGQIEECIFRDVGNTDMKYKNRVRSR 193
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
L N+ D +N RRKVL G + P+ I M+++EMASD+++ + K+ A+ +
Sbjct: 194 LSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMART 252
Query: 260 GLSRKIIVSDIYECGRCGHNKISYQH 285
G ++ +D++ CG+C +Y
Sbjct: 253 GGTQ----TDLFTCGKCRKKNCTYTQ 274
>gi|392559485|gb|EIW52669.1| transcription elongation factor [Trametes versicolor FP-101664 SS1]
Length = 306
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 117/288 (40%), Gaps = 42/288 (14%)
Query: 43 ITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVE 102
IT LL ++ + + +H S+++ LA +++ W+ +VE E A AK
Sbjct: 35 ITESLLRESKAGLAVGKLRQHASKRVADLAKEIVRKWK---TEVER-EKQASGGGAKAAS 90
Query: 103 NVKV----EEVTNGEERRHDSGNV-PKKSIS-CMIKCN----------------DSFREI 140
N K + V+ G S V P S S K N D R+
Sbjct: 91 NGKTSAAKKSVSAGSNAATPSTPVTPTASTSGSGSKLNETRSAKTDGVKIEYTGDKTRDK 150
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL 200
E +YDAL V D A + + +A D +E ++ +N YK K R L
Sbjct: 151 CAELIYDAL--VFDSGAPSEQV-MTRAKD-------IEKTVFNDNSGANAAYKAKIRSLF 200
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVG 260
N+ D N R V+ G + MS+++MAS++ + + + ++ T +G
Sbjct: 201 VNLKDKNNPGLRESVVSGDLAIAKFCRMSSQDMASEERKAADAKIAQENLFKT-----LG 255
Query: 261 LSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+D ++CGRC K Y+ + D +T VTC CN W
Sbjct: 256 AEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRW 303
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 31/289 (10%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K+ +T LL ST++ + + K + +++ LA LI SW+ + D + +
Sbjct: 1 MDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVIALAKSLIKSWKKL-LDASEEK 59
Query: 91 YVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCM-----------IKCNDSFRE 139
K L + E G R S + + I C D+ R
Sbjct: 60 SEEKKKNLSLPTSSSKE---TGNSRDQSSNKRQEPPKTPTTPKITTFPPAPITC-DAVRN 115
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
RE L AL AD I + C+ +A +E +Y+ ++ YK + R
Sbjct: 116 KCREMLTSALQ------ADDDYIAIGADCE--HIAAQIEECIYQDIKNTDMKYKNRVRSR 167
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV 259
+ N+ D +N + ++ VL G + PE I M+++EMAS++++ + K+ A+ +
Sbjct: 168 ISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKE-AIREHQMAKT 226
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 227 GGTQ----TDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 271
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 172 QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAK 231
++A +E ++++ ++ Y+ + R + N+ DP+N RR VL G ++P I M+A+
Sbjct: 245 KMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPALRRNVLCGAIEPSLIARMTAE 304
Query: 232 EMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILD 290
EMASD+++ + + ++ A+ + G + V+D+++CG+C +Y Q +
Sbjct: 305 EMASDELKKLRNAMTQE-AIREHQMAKTGGT----VTDLFQCGKCKKKNCTYNQVQTRSA 359
Query: 291 DYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 360 DEPMTTFVLCNECGNRW 376
>gi|441639245|ref|XP_003280185.2| PREDICTED: transcription elongation factor A protein 2 [Nomascus
leucogenys]
Length = 443
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 71 LAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVK-VEEVTNGEERRHDSGNVPKKS--- 126
LA LI SW+ + D D + + L + + E + +R + P
Sbjct: 212 LAKSLIKSWKKL-LDASDAKARERGRGTPLPTSSRDASEAPDPSRKRPELPRAPSTPRIT 270
Query: 127 --ISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEK 184
+ C D+ R RE L AL D+ + + C+ +++ +E ++
Sbjct: 271 TFPPVPVTC-DAVRSKCREMLAAALQ------TDRDHVAIGADCE--RLSAQIEECIFRD 321
Query: 185 WCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHH 244
++ YK + R + N+ D +N D RR VL G + P+ I M+++EMASD+++
Sbjct: 322 VGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKT 381
Query: 245 LDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNC 303
+ K+ A+ + G ++ +D++ CG+C +Y Q + D +T V C C
Sbjct: 382 MTKE-AIREHQMARTGGTQ----TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNEC 436
Query: 304 NQYW 307
W
Sbjct: 437 GNRW 440
>gi|401887634|gb|EJT51614.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 2479]
Length = 300
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 135 DSFREIVR-EKLYDALSKVSDEAADKVTIDLVKACDPI-QVAILVESAMYE--KWCRSNG 190
DS R R K D +S++ ++ D + DL I + AI +E ++ K+ N
Sbjct: 137 DSTRTTPRNSKTDDMVSRLRSDSTDAASEDLTSDKKTIAERAIGIEREAFKLLKFNSGN- 195
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGA 250
Y+ K R L NI D N R +++LG V P+ ++ MS +EMAS+ ++L N
Sbjct: 196 EYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEEMASESVRLLNEK------ 249
Query: 251 LVTGHIF---PVGLSRKIIVSDIYECGRCGHNKISYQHSSILDDYNLTRHVTCLNC 303
L ++F VG+++ +D ++C RC K +Y + + +TC C
Sbjct: 250 LAEKNLFKAKAVGVTQ--AETDAFKCSRCQQRKCTYYQ---MQTRSADEPMTCGGC 300
>gi|448518329|ref|XP_003867941.1| Dst1 protein [Candida orthopsilosis Co 90-125]
gi|380352280|emb|CCG22505.1| Dst1 protein [Candida orthopsilosis]
Length = 300
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 171 IQVAILVESAMYE-KWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
I +A +ES +++ ++ + N Y+ K R N+ + +N + R +VL + I M+
Sbjct: 164 ITIASEIESEVFKSEYSKVNDAYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMT 223
Query: 230 AKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSS 287
EMA + ++ L K ++F G + K V+D + CG+C H K+S YQ +
Sbjct: 224 PNEMAPEALKKEIEKLHKQ------NLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 277
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D LT TC NC W
Sbjct: 278 RSADEPLTTFCTCENCGNRW 297
>gi|302309342|ref|NP_986676.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|299788313|gb|AAS54500.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|374109927|gb|AEY98832.1| FAGR011Wp [Ashbya gossypii FDAG1]
Length = 304
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE--KWCRSNGMY 192
D R++V YDAL+K S+ + + +AI +E M++ + Y
Sbjct: 141 DKLRDMVIRAFYDALAKESEHPPQSI----------LAIAIDIEKHMWQLNDPGENEKAY 190
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
K KYR + N+ N+D + K+ G + PE ++N KE+A + H K +
Sbjct: 191 KDKYRVIYSNVISKNNRDLKHKITNGDITPEYLVNCDPKELAPE------HLRKKLEEIA 244
Query: 253 TGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
++F G + + V+D ++CG+C K+S YQ + D LT TC C W
Sbjct: 245 KQNLFNAQGATLERSVTDRFQCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRW 301
>gi|410929091|ref|XP_003977933.1| PREDICTED: transcription elongation factor A protein 2-like
[Takifugu rubripes]
Length = 284
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 117/261 (44%), Gaps = 21/261 (8%)
Query: 31 CIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDV 89
+D L +++N ++ ++L ST+V + + K S +++Q +A LI SW+ + E+
Sbjct: 26 ALDLLRELRNMKMSLEMLQSTRVGMSVNAVRKQSSDEEVQNIAKSLIKSWKKLLDGSEEK 85
Query: 90 --EYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVP-----KKSISCMIKCNDSFREIVR 142
+ V + ++ + T + + P + + D+ R R
Sbjct: 86 KKDGSPVRSSSTSKDSGSSRKSTKASDESSGAPTGPGLPPPVAAFPPALVTKDNVRNKCR 145
Query: 143 EKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFN 202
E L AL D L D +A +E +Y+++ + YK + R + N
Sbjct: 146 ELLVAALQTGGDH--------LTMGVDCQHLAAQIEEEIYQEFKSTETKYKSRLRSRISN 197
Query: 203 ISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLS 262
+ D +N + RR VL G++ P+ I +MSA+EMAS +++ L K+ ++ + VG +
Sbjct: 198 LKDQKNPELRRNVLCGNISPQRIASMSAEEMASAELKQIREALTKE-SIREHQLSKVGGT 256
Query: 263 RKIIVSDIYECGRCGHNKISY 283
+D++ C C SY
Sbjct: 257 E----TDMFICNNCHGKSCSY 273
>gi|308808340|ref|XP_003081480.1| putative elongation factor (ISS) [Ostreococcus tauri]
gi|116059943|emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri]
Length = 126
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
M KW YK K R L FN+ DP+N D R + +G + + +I+++ +E+ S++ +
Sbjct: 1 MTAKWPEGGKDYKAKVRQLAFNMRDPKNPDLRTNLAMGEISADVLIDLTPEELGSNERRQ 60
Query: 241 WNHHLDK--DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRH 297
N + + + V G ++ +D ++CG+C K + YQ + D +T
Sbjct: 61 ANEKIREFAEWEAVRGQ-------QQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTF 113
Query: 298 VTCLNCNQYW 307
VTC+NC W
Sbjct: 114 VTCVNCGNRW 123
>gi|410959484|ref|XP_003986338.1| PREDICTED: PHD finger protein 3 [Felis catus]
Length = 2211
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
NV + S D R+ VR L D L K E+ KV + KA +VA +E
Sbjct: 1085 NVHPPATSTSKPSADQIRQSVRHSLKDILMKRLTESNLKVPEE--KAA---KVATKIEKE 1139
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
++ + ++ YK KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++
Sbjct: 1140 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1199
Query: 241 W 241
W
Sbjct: 1200 W 1200
>gi|396472195|ref|XP_003839048.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
gi|312215617|emb|CBX95569.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
Length = 304
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 110/276 (39%), Gaps = 28/276 (10%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVT-------- 95
T LL ST++ + + H +Q+LA +L+S WRD A T
Sbjct: 42 TEDLLRSTRIGVTINRLRTHKDPAVQRLATELVSKWRDQVKKQPKKGTPAKTAANSGASA 101
Query: 96 ---KKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKV 152
+ + D N + + NDS R+ + +YD L+ +
Sbjct: 102 SPAPPPSGTASPAPAAAKKKHDVPADKRNHRTDKVKYQVTGNDS-RDACVKLMYDGLAFM 160
Query: 153 SDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFR 212
S+ D++ + +A VE+A Y N YK K R L N+ + N R
Sbjct: 161 SEAMPDEILV----------IAKQVEAAAYTNAGSINDAYKAKMRSLFQNLKNKTNPQLR 210
Query: 213 RKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYE 272
++V G + + + M+ EM SD+ + + L+++ + + V + +S ++
Sbjct: 211 KRVFSGDISAKRFVVMTHDEMKSDERRAEDKILEQEN-INQAMVAQV----EKAISKEFQ 265
Query: 273 CGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
CG+C +SY + D +T C+NC W
Sbjct: 266 CGKCKQKMVSYSQAQTRSADEPMTTFCECMNCGNRW 301
>gi|354543920|emb|CCE40642.1| hypothetical protein CPAR2_106770 [Candida parapsilosis]
Length = 300
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDP---IQVAILVESAMYE-KWCRSNGMYKFKY 196
V LYD ++ + A ++ + + P I +A +ES +++ ++ + N Y+ K
Sbjct: 131 VNTTLYDNPTRNASVGALYSSLAVERNDSPQHIITIASEIESEVFKSEYSKVNDSYRNKL 190
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI 256
R N+ + +N + R +VL + I M+ EMA + ++ L K ++
Sbjct: 191 RSFTMNLRNKKNPELRERVLSKQITASQFIKMTPNEMAPEALKKEIEKLHKQ------NL 244
Query: 257 FPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
F G + K V+D + CG+C H K+S YQ + D LT TC NC W
Sbjct: 245 FDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRW 297
>gi|395833389|ref|XP_003789719.1| PREDICTED: PHD finger protein 3 isoform 1 [Otolemur garnettii]
Length = 2041
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S +EI+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 937 SLKEILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 983
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 984 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1029
>gi|281346348|gb|EFB21932.1| hypothetical protein PANDA_019839 [Ailuropoda melanoleuca]
Length = 264
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 116 RHDSGNVPKKSISCMIKC---NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQ 172
R D N +S + +DS R RE L AL D A + D + I+
Sbjct: 76 RKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVA--IGADEEELGSQIE 133
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
IL+ +Y++ ++ YK + R + N+ D +N + R+ VL G++ P+ M+A+E
Sbjct: 134 EDILL--PIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEE 191
Query: 233 MASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDD 291
MASD+++ +L K+ A+ + G ++ +D++ CG+C +Y Q + D
Sbjct: 192 MASDELKEMRKNLTKE-AIREHQMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSAD 246
Query: 292 YNLTRHVTCLNCNQYW 307
+T V C C W
Sbjct: 247 EPMTTFVVCNECGNRW 262
>gi|403268692|ref|XP_003926403.1| PREDICTED: PHD finger protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 2039
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E +Y + ++ YK K
Sbjct: 933 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELYSFFRDTDAKYKNK 979
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 980 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1025
>gi|395833391|ref|XP_003789720.1| PREDICTED: PHD finger protein 3 isoform 2 [Otolemur garnettii]
Length = 1953
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S +EI+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 849 SLKEILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 895
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 896 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 941
>gi|366987517|ref|XP_003673525.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
gi|342299388|emb|CCC67142.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
Length = 307
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 40/286 (13%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T +LL T+V + K + +I KL +ISSW+D + ++ + AK ++
Sbjct: 37 TEKLLRETKVGVEVNKFKKSTNVEIAKLVKKMISSWKDAINRNKKLKQQQ--QPAKEMDT 94
Query: 104 VKVEEVTNGEERRHDSGNV----PKKSISCM--------------IKCNDSFREIVREKL 145
V+ +ER + PKK + ND R+ V + L
Sbjct: 95 TNANGVSTDKERTTSPSDATVSSPKKQTKFTSTKPRNSKNDGVNTVVYNDKLRDSVVKAL 154
Query: 146 YDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRS--NGMYKFKYRCLLFNI 203
YDAL+K S+ + + VK+ +E+ MY+ S YK KYR + NI
Sbjct: 155 YDALAKESEHPPASI-LHTVKS---------IENEMYKLNNPSINERQYKEKYRIIYSNI 204
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLS 262
N D + K+ + P+ ++N KE+A + H K + ++F G +
Sbjct: 205 ISKNNPDLKNKITNNDITPDYLVNCDPKELAPE------HLKKKLEEIKKQNLFNAQGAT 258
Query: 263 RKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+ V+D + CG+C K+S YQ + D LT TC C W
Sbjct: 259 IERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 304
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 123/286 (43%), Gaps = 18/286 (6%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K+ +T LL ST++ + + K + +++ LA LI SW+ + D + +
Sbjct: 4 MDLLKELKSMPMTLDLLQSTRIGMSVNALRKQSTDEEVISLAKSLIKSWKKL-LDASEEK 62
Query: 91 YVAV-------TKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVRE 143
T +K N + + +E + D+ R RE
Sbjct: 63 SEEKKKSMSLPTSSSKETGNSRDQSSNKRQEPPKTPTTPKITTFPPAPVTCDAVRNKCRE 122
Query: 144 KLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YKFKYRCLLFN 202
L AL D A + D I+ IL A + ++ M YK + R + N
Sbjct: 123 MLTAALQADDDYVA--IGADCEHIAAQIEEYILTNGASSRAYVKNTDMKYKNRVRSRISN 180
Query: 203 ISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLS 262
+ D +N + ++ VL G + PE I M+++EMAS++++ + K+ A+ + G +
Sbjct: 181 LKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKE-AIREHQMAKTGGT 239
Query: 263 RKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 240 Q----TDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 281
>gi|348588983|ref|XP_003480244.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Cavia
porcellus]
Length = 2019
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
D R+ VR L D L K E+ KV + KA +VA +E ++ + ++ YK
Sbjct: 907 DQIRQSVRHSLKDILMKRLTESNLKVPEE--KAA---KVATKIEKELFSFFRDTDAKYKN 961
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR L+FN+ DP+N +KVL G V P+ +I MS++E+AS ++ W
Sbjct: 962 KYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSSEELASKELAAW 1008
>gi|365986008|ref|XP_003669836.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
gi|343768605|emb|CCD24593.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
Length = 308
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 48/289 (16%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T +LL T+V + K +++I K+ +ISSW+D + + ++ K E
Sbjct: 40 TEKLLRETKVGVEVNKFKKSSNEQIAKVVKKMISSWKDTINKNKKLRL----QQQKEAEA 95
Query: 104 VKVEEVTNGEERRHDSGNVPKKSISCMIKCND---------------------SFREIVR 142
K+ NG + + VP ++S K N R+ V
Sbjct: 96 AKLNSNQNGS---NTTTQVPDSNLSSPQKQNRYVSTKPRNSKNDGVNTTIYGVKLRDSVI 152
Query: 143 EKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSN-GMYKFKYRCLL 200
LYDAL+K S+ + + + VK+ +ES M++ C N YK KYR +
Sbjct: 153 RALYDALAKGSEHPPNSI-LHTVKS---------IESEMFKLNNCTENEKAYKEKYRIIY 202
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV- 259
NI N D + K+ + PE ++ KE+A + H K + ++F
Sbjct: 203 SNIISKNNADLKNKIANNDISPEYLVTCDPKELAPE------HLKQKLEEIKKQNLFNAQ 256
Query: 260 GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
G + + V+D + CG+C K+S YQ + D LT TC C W
Sbjct: 257 GATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 305
>gi|345304943|ref|XP_001505863.2| PREDICTED: PHD finger protein 3-like [Ornithorhynchus anatinus]
Length = 1190
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ K+ +E A KV A+ +E ++ + ++ YK K
Sbjct: 91 SLKDILMKRLTDSNLKIPEERASKV-------------AMKIEKELFSFFRDTDAKYKNK 137
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 138 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 183
>gi|403268694|ref|XP_003926404.1| PREDICTED: PHD finger protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1951
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E +Y + ++ YK K
Sbjct: 845 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELYSFFRDTDAKYKNK 891
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 892 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 937
>gi|296198507|ref|XP_002746742.1| PREDICTED: PHD finger protein 3 isoform 1 [Callithrix jacchus]
Length = 2039
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E +Y + ++ YK K
Sbjct: 933 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELYSFFRDTDAKYKNK 979
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 980 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1025
>gi|296198509|ref|XP_002746743.1| PREDICTED: PHD finger protein 3 isoform 2 [Callithrix jacchus]
Length = 1951
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E +Y + ++ YK K
Sbjct: 845 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELYSFFRDTDAKYKNK 891
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 892 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 937
>gi|358367754|dbj|GAA84372.1| transcription elongation factor S-II [Aspergillus kawachii IFO
4308]
Length = 303
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 114/278 (41%), Gaps = 32/278 (11%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL ST+V + + +H S ++ +LA +++S WR + ++++ +
Sbjct: 42 TEDLLRSTRVGIAVNKLKQHKSPEVARLASEIVSKWRHEVNKQKAGASPGASQRSSSSPH 101
Query: 104 VKVEEVTNGEERRHDSGN---VPKKSISCMIKCNDSFREIVREK------LYDALSKVSD 154
K +G D + VP + D+ + R + +YD L S
Sbjct: 102 PKTNGTPSGGATPSDKASKLSVPPDKRTWKADGVDTNQTGNRIRDSCIGLMYDGLCLNSV 161
Query: 155 EAADKVTIDLVKACDPIQVAILVESAMYEK-WCRSNGMYKFKYRCLLFNISDPENQDFRR 213
E V + A VE+A + + Y+ K R L N+ + N R
Sbjct: 162 EPPRTV----------LSKASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPSLRV 211
Query: 214 KVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDI 270
+VL G V PE + MS E+ S++ Q + + K D A+V R I S
Sbjct: 212 RVLNGDVTPERFVRMSHDELRSEEQQERDRRIQKENMDKAMV------AQAERSISTS-- 263
Query: 271 YECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+CG+CG K++Y + D +T TC+NC + W
Sbjct: 264 LQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMNCGKSW 301
>gi|326916345|ref|XP_003204468.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Meleagris
gallopavo]
Length = 2064
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S +EI+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 942 SLKEILMKRLTDSSLKIPEERAAKV-------------ATRIERELFSFFRDTDSKYKNK 988
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 989 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAW 1034
>gi|170111316|ref|XP_001886862.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638220|gb|EDR02499.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 124/312 (39%), Gaps = 63/312 (20%)
Query: 23 EGVVEEARCIDALDQIKNS-SITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRD 81
+ +E ID L+ +K IT +L ++ + + H ++ + LA +++ W+
Sbjct: 16 QSAADEQEIIDVLNILKKDFEITESILRESKAGLAVGKLRTHAAKHVADLAKEIVKKWK- 74
Query: 82 MCWDVEDVEYVAVTKKAKLVENVKV-EEVTNGEERRHDSGNV---------------PKK 125
VAV +KAK + K ++ G ER+ + K
Sbjct: 75 ----------VAV-EKAKGAHHSKAPQQNGKGPERKASVASTPGTPSTPTTAKVELRTAK 123
Query: 126 SISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLV-KACDPIQVAILVESAMYEK 184
DS R+ E +YDAL+ SD A ++L+ K I+ ++L +
Sbjct: 124 GDGVKGNTGDSTRDKCTELIYDALA--SDSGA---PVELILKHAKAIEASVLAD------ 172
Query: 185 WCRS-NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD------- 236
C YK K R L N+ D N R ++ G ++ E M+++EMAS+
Sbjct: 173 -CDGVTAAYKSKIRSLFVNLKDKSNPSLRESIVSGELQAEKFTKMTSQEMASEERKAADN 231
Query: 237 KIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLT 295
KI+ N H + + + +D ++C RC K Y+ + D +T
Sbjct: 232 KIRAENFH------------NSLAAAEQQAETDAFQCSRCKQRKCRYRQAQTRSADEPMT 279
Query: 296 RHVTCLNCNQYW 307
VTC NC W
Sbjct: 280 TFVTCTNCGNRW 291
>gi|390348322|ref|XP_799219.3| PREDICTED: transcription elongation factor S-II-like
[Strongylocentrotus purpuratus]
Length = 306
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 40 NSSITYQLLVSTQVIRHLLPMLKHPSQK-IQKLAYDLISSWRDMCWDVEDVEYVAVTKKA 98
N++IT ++L T++ + + K Q+ I LA LI W+ + + T K+
Sbjct: 39 NNTITLEVLQKTRIGMAVNNLRKQSDQEEIINLAKVLIKGWKKLL--PQQGGSTPSTNKS 96
Query: 99 KLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAAD 158
K E+ +NG DSGN + DS + I R+ + S S D
Sbjct: 97 K-------EKTSNG-----DSGNSSDQGRGE----GDSSKTINRQSSASSSSSFSSSGLD 140
Query: 159 --------------KVTI----DLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL 200
KV I D + DP ++A ++E +Y ++ S+ YK + R +
Sbjct: 141 VVRERCKQMLVNALKVAIPDLDDGEELQDPEELAGIIEDCIYTEFGNSDLRYKNRVRSRV 200
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVG 260
N+ D +N D RR VL G + E I +M+A+EMAS+ ++ K+ A+ +
Sbjct: 201 SNLQDSKNPDLRRMVLRGTIPAEKIASMAAEEMASEAMKQMRQKFTKE-AINDHQLAHTE 259
Query: 261 LSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+R +++ CG+C +Y Q + D +T V C +C W
Sbjct: 260 GTRSALLT----CGKCRKKNCTYNQMQTRSADEPMTTFVFCNDCGHRW 303
>gi|116180542|ref|XP_001220120.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
gi|88185196|gb|EAQ92664.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
Length = 307
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 141/308 (45%), Gaps = 35/308 (11%)
Query: 16 AVAAVWKEGVVEEARCIDALDQIKNS-SITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYD 74
A AA VV I L+++KN+ + T + L ST+ + + + +++I +LA +
Sbjct: 16 AAAAAEPPSVV-----IALLEELKNAKAPTEEQLRSTKAGVAVGKLRHNANKEIARLASE 70
Query: 75 LISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCN 134
++S WR ++V+ +KK KL E K+E+ + E+ + + PK S +
Sbjct: 71 IVSKWR------KNVDAAKESKKRKL-EQSKLEQ-SKSEQSKSPTSPTPKDSPAPPSTSY 122
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTID----------LVKACDPI----QVAILVESA 180
+ E EK + + KV T D +A + I Q + VE+A
Sbjct: 123 STPYEGDPEKRHFRVDKVDISRTGNKTRDGSIGVLYNGLAYRATESIEEVLQRTMEVEAA 182
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
Y + +N Y+ K R L+ ++ +N + R+VL G + PE M+ +E+ASD +
Sbjct: 183 AYAAYGDTN-EYRAKIRGLMTSLKRKDNPELGRRVLRGDIAPEKFAVMTDEELASDAQRE 241
Query: 241 WNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVT 299
+ L+++ L V ++++ I SD +CG+C K+SY + D +T
Sbjct: 242 RDAALERENMLKAQ----VPMAQRSI-SDSLQCGKCKQKKVSYSQAQTRSADEPMTTFCE 296
Query: 300 CLNCNQYW 307
C C W
Sbjct: 297 CTVCGHRW 304
>gi|403341216|gb|EJY69907.1| Transcription elongation factor TFIIS [Oxytricha trifallax]
Length = 340
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 127/297 (42%), Gaps = 42/297 (14%)
Query: 43 ITYQLLVSTQVIRHLLPMLK---------HPSQKIQKLAYDLISSWRDMCWDVEDVEYVA 93
ITY LL T + + + + K + ++K+++ A L+ SWR + + +
Sbjct: 52 ITYDLLKETLIGKTITSLTKIEAINDDAKNDAEKVRQKAAGLLGSWRKIS---QSEKKGG 108
Query: 94 VTKKAKLVENVKVEEVTNG-----------------EERRHDSGNVP---KKSISCMIKC 133
T+ K EN KVE NG + ++ + P + I +K
Sbjct: 109 KTEDRK--ENSKVEGQKNGAKNNASNSNHSSAQLTSQSKKEEPKQTPDEIQPFIPPGMKV 166
Query: 134 NDS--FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM 191
N +R+ +R + ++ +E + I L +A Q+ + +E +Y+ + R
Sbjct: 167 NTGTQYRDSLRINFIKYM-QIPEEGVEYEEIVLTRAA---QLGLQIEDELYKSFPRL-AE 221
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y+ K R L+FN+ DP+N D R ++ G ++P ++ + +K +AS +Q + +
Sbjct: 222 YQNKARSLMFNLKDPKNPDLRMSLIEGVIEPNQLVRLDSKSLASKALQDERNKTQQANLN 281
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRC-GHNKISYQHSSILDDYNLTRHVTCLNCNQYW 307
+ + + K + C +C N +Q + D +T +TCL+C W
Sbjct: 282 ARRSDWFIENAAKKGNKGFFTCKKCHSKNTTYFQMQTRGADEPMTNFITCLDCKNQW 338
>gi|328876868|gb|EGG25231.1| RNA polymerase II elongation factor [Dictyostelium fasciculatum]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 172 QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAK 231
Q A+ +ES ++E + +N YK K R ++FN+ N ++ +L + M A
Sbjct: 194 QAAVEIESQLFETYGGANSDYKVKARSIIFNLKS--NHLLKKNILSKTLTVTRFCTMDAT 251
Query: 232 EMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILD 290
EMA+ +++ + K LSR+ +D ++CG+C K +Y Q +
Sbjct: 252 EMANKELKEERERMLKYSREA------ATLSREAATTDQFQCGKCKQRKCTYFQLQTRSA 305
Query: 291 DYNLTRHVTCLNCNQYW 307
D LT VTC+NCN W
Sbjct: 306 DEPLTTFVTCVNCNNRW 322
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y+ + R + N+ DP+N + RR VL G + P I M+A+EMASD+++ + + ++ A+
Sbjct: 287 YRNRVRSRISNLKDPKNPNLRRNVLCGAIAPALIARMTAEEMASDELKELRNAMTQE-AI 345
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + V+D+++CG+C +Y Q + D +T V C C W
Sbjct: 346 REHQMAKTGGT----VTDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 398
>gi|255713242|ref|XP_002552903.1| KLTH0D04136p [Lachancea thermotolerans]
gi|238934283|emb|CAR22465.1| KLTH0D04136p [Lachancea thermotolerans CBS 6340]
Length = 293
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 109/271 (40%), Gaps = 24/271 (8%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVT---KKAKL 100
T +LL T+V + K + KI L +I WRD + +A T +
Sbjct: 37 TEKLLRETKVGVVVNQFKKSSNAKIAGLVKKMIGEWRDAISREKKQRAMAKTGTTAASSS 96
Query: 101 VENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKV 160
E G+ N + I N R++V YDAL+K S+ +
Sbjct: 97 SATSSSEPKRQGKFVSTKPRNAKNDGVVTTI-YNHKLRDMVIRAFYDALAKESEHPPQSI 155
Query: 161 TIDLVKACDPIQVAILVESAMYE-KWCRSN-GMYKFKYRCLLFNISDPENQDFRRKVLLG 218
+ AI +E + + C N YK KYR + N+ N D + ++ G
Sbjct: 156 ----------LTTAIAIEKELNKVNNCELNEKAYKDKYRVVYANVISKNNPDLKHRITGG 205
Query: 219 HVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCG 277
V PE ++N KE+A + ++ N + + ++F G + + V+D + CG+C
Sbjct: 206 DVSPEYLVNCDPKELAPEHLKKKNEEIARQ------NLFNAQGATLERSVTDRFTCGKCK 259
Query: 278 HNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
K+S YQ + D LT TC C W
Sbjct: 260 EKKVSYYQLQTRSADEPLTTFCTCEVCGNRW 290
>gi|390597425|gb|EIN06825.1| transcription elongation factor [Punctularia strigosozonata
HHB-11173 SS5]
Length = 320
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
+D R+ E +YDAL+ S AD V ++ A +ES + ++ + YK
Sbjct: 158 SDKTRDKCIELIYDALASDSSAPADLV----------LKRARGIESDVLSQFRTTGAEYK 207
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
K R N+ D N R V+ G + E M++ +MAS++ + + + ++ +
Sbjct: 208 AKIRSFFVNLKDKNNPGLRAAVVSGELPVEKFAKMTSADMASEERRAQDQKIREENLFQS 267
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+G + +D ++C RC K Y+ + D +T VTC CN W
Sbjct: 268 -----LGAEEQQAETDAFQCSRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRW 317
>gi|331242717|ref|XP_003334004.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312994|gb|EFP89585.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 382
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 188 SNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
SNG YK K R L+FN+ D N R V+ G + + M ++MAS++ + +
Sbjct: 265 SNG-YKIKMRSLIFNLRDKNNPGLRESVVSGEISAGRLCVMGPQDMASEERKA------Q 317
Query: 248 DGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQ 305
D L ++F G + +D + C RCG K + YQ + D +T VTC+NCN
Sbjct: 318 DRKLAEENLFKARGAGPQQAETDAFRCARCGQRKCTYYQMQTRSADEPMTTFVTCVNCNC 377
Query: 306 YW 307
W
Sbjct: 378 RW 379
>gi|403178039|ref|XP_003336480.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375173311|gb|EFP92061.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 382
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 188 SNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
SNG YK K R L+FN+ D N R V+ G + + M ++MAS++ + +
Sbjct: 265 SNG-YKIKMRSLIFNLRDKNNPGLRESVVSGEISASRLCVMGPQDMASEERKA------Q 317
Query: 248 DGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQ 305
D L ++F G + +D + C RCG K + YQ + D +T VTC+NCN
Sbjct: 318 DRKLAEENLFKARGAGPQQAETDAFRCARCGQRKCTYYQMQTRSADEPMTTFVTCVNCNC 377
Query: 306 YW 307
W
Sbjct: 378 RW 379
>gi|327280228|ref|XP_003224854.1| PREDICTED: PHD finger protein 3-like [Anolis carolinensis]
Length = 2037
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S +EI+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 934 SLKEILEKRLTDSTLKIPEERAAKV-------------ATKIEKELFSFFRDTDSKYKNK 980
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N+ ++VL G V P+ +I MS +E+AS ++ W
Sbjct: 981 YRSLIFNLKDPKNKILFKRVLKGEVTPDHLIRMSPEELASKELAAW 1026
>gi|313221451|emb|CBY32201.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 123/287 (42%), Gaps = 29/287 (10%)
Query: 31 CIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ-----KIQKLAYDLISSWR-DMCW 84
+D L+ +K IT +LL S++ I H++ L+ +Q +I + LI W+ M
Sbjct: 25 AVDLLNALKEEKITKELLESSK-IGHVVNALRKGAQTSGHAEIAAQSKSLIKQWKAQMAQ 83
Query: 85 DVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIK-CNDSFREIVRE 143
+ + A K V+ + +E+ S + S+ I+ D R RE
Sbjct: 84 NAGGGDNGAPAK----VQKTESSSQKREKEKEKTSDSKDDFSLGASIQPTADPVRNKSRE 139
Query: 144 KLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE--KWCRSNGMYKFKYRCLLF 201
L AL + D+ DK + V +A +E A+Y S+ Y+ K R
Sbjct: 140 LLQKAL--LVDK--DKFSPQFVSL-----MAAKIEEAIYNFHGNSSSDTKYRNKIRSRYS 190
Query: 202 NISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGL 261
N+ D +N D R V+ G + P+ + +M +EMAS ++Q K+ + H
Sbjct: 191 NLKDAKNPDLRDSVMTGVISPDKLASMKPEEMASKQLQELRKKFTKEA--INDHQM---A 245
Query: 262 SRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ +D++ CG+C K +Y Q + D +T V C+ C W
Sbjct: 246 QNEGTQTDMFSCGKCKSKKCTYTQLQTRSADEPMTTFVYCMACGNRW 292
>gi|194391306|dbj|BAG60771.1| unnamed protein product [Homo sapiens]
Length = 861
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 203 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 249
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 250 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 295
>gi|395534413|ref|XP_003769236.1| PREDICTED: PHD finger protein 3 [Sarcophilus harrisii]
Length = 2029
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 925 SLKDILMKRLTDSNLKIPEERASKV-------------ATKIEKELFSFFRDTDAKYKNK 971
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 972 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1017
>gi|408389619|gb|EKJ69057.1| hypothetical protein FPSE_10756 [Fusarium pseudograminearum CS3096]
Length = 308
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 129/293 (44%), Gaps = 49/293 (16%)
Query: 39 KNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA 98
K++S T ++L +T+ + + +P+++I + A +L+S W+ + + E + +K+
Sbjct: 38 KDASPTEEMLRATRAGVFVGKLRSNPNKEIARAAAELVSKWKKLV----EQEKSSKLQKS 93
Query: 99 KLVE-----------------------NVKVEEVTNGEERRHDSGNVPKKSISCMIKCND 135
K+ N + + E+R++++ NV K + +
Sbjct: 94 KVGSGSPAPAPASAPASSPAPPPSSSGNSGAKYKGDIEKRKYETDNVNVK------RTDS 147
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
+ R +Y+ L+ S + ++V + AI VE+A + K+ YK K
Sbjct: 148 AVRNSCIGLIYNGLAYRSTASENEV----------VNKAITVENAAFVKFKGETADYKKK 197
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R L N+ + N++ + VL G + PE + MS E+ S++ + L+K+
Sbjct: 198 IRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSDDELKSEEQRKKELELEKENM----K 253
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ V +K I S+ ECG+C ++SY Q + D +T C+ C W
Sbjct: 254 MAQVPQEQKSI-SESLECGKCKKKQVSYTQAQTRAADEPMTTFCECMACGNRW 305
>gi|301781204|ref|XP_002926018.1| PREDICTED: PHD finger protein 3-like [Ailuropoda melanoleuca]
Length = 2074
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 968 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 1014
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 1015 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1060
>gi|281350870|gb|EFB26454.1| hypothetical protein PANDA_015611 [Ailuropoda melanoleuca]
Length = 2043
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 937 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 983
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 984 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1029
>gi|355711246|gb|AES03948.1| PHD finger protein 3 [Mustela putorius furo]
Length = 1987
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 882 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 928
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 929 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 974
>gi|344264752|ref|XP_003404454.1| PREDICTED: PHD finger protein 3 [Loxodonta africana]
Length = 2047
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
NV + S D R+ VR L D L K ++ KV + KA +VA +E
Sbjct: 914 NVHPPAASTSKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEE--KAA---KVATKIEKE 968
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
++ + ++ YK KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++
Sbjct: 969 LFSFFRDTDAKYKNKYRSLMFNLKDPKNSILFKKVLKGEVTPDHLIRMSPEELASKELAA 1028
Query: 241 W 241
W
Sbjct: 1029 W 1029
>gi|431838241|gb|ELK00173.1| PHD finger protein 3 [Pteropus alecto]
Length = 2121
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 1000 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 1046
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 1047 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1092
>gi|427788339|gb|JAA59621.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2019
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 141 VREKLYDALSKVSDEAAD-KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
VR+ L DAL EA+D ++ D V+ ++A+ +E +++ + + YK KYR L
Sbjct: 977 VRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEELFKVFRDTGTRYKSKYRSL 1031
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
+FNI D NQ RK+L G + P+ ++ M+ +E+AS ++ W +K
Sbjct: 1032 VFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQENK 1079
>gi|427788337|gb|JAA59620.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2031
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 141 VREKLYDALSKVSDEAAD-KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
VR+ L DAL EA+D ++ D V+ ++A+ +E +++ + + YK KYR L
Sbjct: 989 VRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEELFKVFRDTGTRYKSKYRSL 1043
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
+FNI D NQ RK+L G + P+ ++ M+ +E+AS ++ W +K
Sbjct: 1044 VFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQENK 1091
>gi|427780239|gb|JAA55571.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2067
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 141 VREKLYDALSKVSDEAAD-KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
VR+ L DAL EA+D ++ D V+ ++A+ +E +++ + + YK KYR L
Sbjct: 989 VRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEELFKVFRDTGTRYKSKYRSL 1043
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
+FNI D NQ RK+L G + P+ ++ M+ +E+AS ++ W +K
Sbjct: 1044 VFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQENK 1091
>gi|225719828|gb|ACO15760.1| Transcription elongation factor A protein 1 [Caligus clemensi]
Length = 296
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 131 IKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNG 190
I D R RE + +AL D + + K+ P ++A L+E +++ ++
Sbjct: 128 INTTDDVRLRCREMITNALKGAGD-----LPDGICKS--PEELADLIEESIFSSNKSTSA 180
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGA 250
YK + R +FN+ D +N R VL G ++P M+A EMASD+++ K G
Sbjct: 181 KYKNQIRSRVFNLRDKKNPALRENVLTGIIEPSKFAVMTADEMASDEVKKQRAAFVKQG- 239
Query: 251 LVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ + + ++ +D+ +CG+CG + +Y Q + D +T V C C W
Sbjct: 240 IDASQLAQIQGTK----TDLLKCGKCGKSDCTYNQIQTRSADEPMTTFVLCNACGNRW 293
>gi|355561823|gb|EHH18455.1| hypothetical protein EGK_15055 [Macaca mulatta]
Length = 2040
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
NV + S D R+ VR L D L K ++ KV + KA +VA +E
Sbjct: 912 NVHPPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEE--KAA---KVATKIEKE 966
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
++ + ++ YK KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++
Sbjct: 967 LFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1026
Query: 241 W 241
W
Sbjct: 1027 W 1027
>gi|456753196|gb|JAA74119.1| PHD finger protein 3 [Sus scrofa]
Length = 2032
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 927 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 973
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 974 YRSLMFNLKDPKNNILFKKVLRGEVTPDHLIRMSPEELASKELAAW 1019
>gi|402867376|ref|XP_003897831.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3 [Papio anubis]
Length = 2165
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
NV + S D R+ VR L D L K ++ KV + KA +VA +E
Sbjct: 1037 NVHPPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEE--KAA---KVATKIEKE 1091
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
++ + ++ YK KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++
Sbjct: 1092 LFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1151
Query: 241 W 241
W
Sbjct: 1152 W 1152
>gi|7662018|ref|NP_055968.1| PHD finger protein 3 [Homo sapiens]
gi|34098662|sp|Q92576.3|PHF3_HUMAN RecName: Full=PHD finger protein 3
gi|6648928|gb|AAF21292.1|AF091622_1 PHD finger protein 3 [Homo sapiens]
gi|109731109|gb|AAI13651.1| PHD finger protein 3 [Homo sapiens]
gi|109731774|gb|AAI13653.1| PHD finger protein 3 [Homo sapiens]
gi|119608902|gb|EAW88496.1| PHD finger protein 3 [Homo sapiens]
gi|126540985|emb|CAM45842.1| PHD finger protein 3 [Homo sapiens]
gi|168278551|dbj|BAG11155.1| PHD finger protein 3 [synthetic construct]
Length = 2039
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 934 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 980
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 981 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1026
>gi|20521870|dbj|BAA13438.2| KIAA0244 [Homo sapiens]
Length = 2044
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 939 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 985
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 986 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1031
>gi|395737392|ref|XP_002817084.2| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pongo
abelii]
Length = 2061
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 949 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 995
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 996 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1041
>gi|46108040|ref|XP_381078.1| hypothetical protein FG00902.1 [Gibberella zeae PH-1]
Length = 307
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 129/293 (44%), Gaps = 49/293 (16%)
Query: 39 KNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA 98
K++S T ++L +T+ + + +P+++I + A +L+S W+ + + E + +K+
Sbjct: 37 KDASPTEEMLRATRAGVFVGKLRSNPNKEIARAAAELVSKWKKLV----EQEKSSKLQKS 92
Query: 99 KLVE-----------------------NVKVEEVTNGEERRHDSGNVPKKSISCMIKCND 135
K+ N + + E+R++++ NV K + +
Sbjct: 93 KVGSGSPAPAPASAPASSPAPPPSSSGNSGAKYKGDIEKRKYETDNVNVK------RTDS 146
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
+ R +Y+ L+ S + ++V + AI VE+A + K+ YK K
Sbjct: 147 AVRNSCIGLIYNGLAYRSTASENEV----------VNKAITVENAAFVKFKGETADYKKK 196
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
R L N+ + N++ + VL G + PE + MS E+ S++ + L+K+
Sbjct: 197 IRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSDDELKSEEQRKKELELEKENM----K 252
Query: 256 IFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ V +K I S+ ECG+C ++SY Q + D +T C+ C W
Sbjct: 253 MAQVPQEQKSI-SESLECGKCKKKQVSYTQAQTRAADEPMTTFCECMACGNRW 304
>gi|417406878|gb|JAA50079.1| Putative transcription factor datf1 [Desmodus rotundus]
Length = 2045
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 939 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 985
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 986 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1031
>gi|315046468|ref|XP_003172609.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
gi|311342995|gb|EFR02198.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
Length = 297
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 40/280 (14%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL ST++ + + +H + + +LA +++S WR + + K N
Sbjct: 40 TEDLLRSTKIGIIVNRLKQHKAPDVARLASEIVSKWRAEVNKQKKTASPVASDSPKPSSN 99
Query: 104 VKVEEVTNGEERRHDSGNVPKK---------SISCMIKCNDSFREIVREKLYDALSKVSD 154
+ ++ S P K + +K DS + +YD L S
Sbjct: 100 GNGTPASAANDKPQSSTVHPDKRSWKADQVNTAVTGVKARDSCLGL----MYDGLCLGST 155
Query: 155 EAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFRR 213
E + V +Q A VE+A ++ + + Y+ K R L N+ + N R
Sbjct: 156 EPSRTV----------LQKATEVEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRT 205
Query: 214 KVLLGHVKPETIINMSAKEMASDK-----IQLWNHHLDKDGALVTGHIFPVGLSRKIIVS 268
+VL + P+ +NM+ E+ SD+ +++ ++DK A+ VG + I S
Sbjct: 206 RVLTNEIAPDRFVNMTHDELKSDERREEDLKIQKENMDK--AM-------VGQPERSI-S 255
Query: 269 DIYECGRCGHNKISYQHSSI-LDDYNLTRHVTCLNCNQYW 307
+CG+CG K++Y + D +T TCL C + W
Sbjct: 256 KSLQCGKCGQRKVTYTEAQTRAADEPMTLFCTCLACGKSW 295
>gi|351711851|gb|EHB14770.1| PHD finger protein 3 [Heterocephalus glaber]
Length = 2028
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 923 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 969
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 970 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAW 1015
>gi|383417063|gb|AFH31745.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
NV + S D R+ VR L D L K ++ KV + KA +VA +E
Sbjct: 912 NVHPPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEE--KAA---KVATKIEKE 966
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
++ + ++ YK KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++
Sbjct: 967 LFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1026
Query: 241 W 241
W
Sbjct: 1027 W 1027
>gi|380811170|gb|AFE77460.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
NV + S D R+ VR L D L K ++ KV + KA +VA +E
Sbjct: 912 NVHPPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEE--KAA---KVATKIEKE 966
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
++ + ++ YK KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++
Sbjct: 967 LFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1026
Query: 241 W 241
W
Sbjct: 1027 W 1027
>gi|355762974|gb|EHH62098.1| hypothetical protein EGM_20299 [Macaca fascicularis]
Length = 2040
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
NV + S D R+ VR L D L K ++ KV + KA +VA +E
Sbjct: 912 NVHPPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEE--KAA---KVATKIEKE 966
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
++ + ++ YK KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++
Sbjct: 967 LFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1026
Query: 241 W 241
W
Sbjct: 1027 W 1027
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E+ +Y++ ++ Y+ + R + N+ DP N RR VL G + PE I
Sbjct: 211 CD--KLASEIETHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAK 268
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+ C +C +Y Q
Sbjct: 269 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLLRCSKCKKKNCTYNQVQ 323
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 324 TRSADEPMTTFVLCNECGNRW 344
>gi|426328836|ref|XP_004025454.1| PREDICTED: SPOC domain-containing protein 1 [Gorilla gorilla
gorilla]
Length = 1173
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
E+ DS + ++ S I + ++E L+ L ++ D + ++ +
Sbjct: 589 EQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRLQELPDPVLSEEVVE--------GI 640
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ ++
Sbjct: 641 AAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVNPYDLVRMSSMQL 700
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 701 APQELARWRDQEEKRG 716
>gi|449497986|ref|XP_002192240.2| PREDICTED: PHD finger protein 3 isoform 1 [Taeniopygia guttata]
Length = 2086
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 13/112 (11%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S +EI+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 966 SLKEILMKRLTDSSLKIPEERAAKV-------------ATRIERELFSFFRDTDAKYKNK 1012
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W ++
Sbjct: 1013 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENR 1064
>gi|432112838|gb|ELK35434.1| PHD finger protein 3 [Myotis davidii]
Length = 2033
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 934 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 980
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 981 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1026
>gi|60219226|emb|CAI56715.1| hypothetical protein [Homo sapiens]
Length = 1951
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 846 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 892
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 893 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 938
>gi|296484308|tpg|DAA26423.1| TPA: PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 926 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 972
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1018
>gi|254569920|ref|XP_002492070.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
gi|238031867|emb|CAY69790.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
Length = 285
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T ++L T+V + + H + ++ L +I +W+D V+ KK K V +
Sbjct: 36 TEKVLRETKVGVTVNRLRSHANPEVGTLVKKIIKTWKD---------GVSQEKKKKAVSS 86
Query: 104 V----KVEEVTNGEERRHDSGNVPKKSISCMIKC-NDSFREIVREKLYDALSKVSDEAAD 158
K T ER G K+ ++ + R +Y AL+ SDE
Sbjct: 87 AGSPAKSTTSTTTNERFVSKGPRTPKNDGVKVEIYENKTRNGSISAIYTALAMDSDEQPS 146
Query: 159 KVTIDLVKACDPIQVAILVESAMYEKWCRS------NGMYKFKYRCLLFNISDPENQDFR 212
K+ +LVK EK C + Y+ K R L+ N+ + N R
Sbjct: 147 KI-FELVKDI--------------EKQCFKAVNFTVDDTYRNKLRSLIMNLKNKNNPTLR 191
Query: 213 RKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIY 271
R +L + P ++ MSA+E+A D ++ + K ++F G + V+D +
Sbjct: 192 RSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKK------NLFDAQGATENNSVTDRF 245
Query: 272 ECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
ECG+C K+SY Q + D LT C NC W
Sbjct: 246 ECGKCKQRKVSYFQKQTRSADEPLTTFCKCENCGNRW 282
>gi|300796758|ref|NP_001179500.1| PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 926 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 972
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1018
>gi|73973196|ref|XP_538985.2| PREDICTED: PHD finger protein 3 isoform 1 [Canis lupus familiaris]
Length = 2043
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
D R+ VR L D L + E+ KV + KA +VA +E ++ + ++ YK
Sbjct: 927 DQIRQSVRHSLKDILMRRLTESNLKVPEE--KAA---KVATKIEKELFSFFRDTDAKYKN 981
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 982 KYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1028
>gi|388854758|emb|CCF51651.1| related to transcription elongation factor TFIIS [Ustilago hordei]
Length = 317
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 173 VAILVESAMYEKWCRSN--GMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
A+ VE+A+ + + Y+ K R L NI D N D R +V+ + + ++ M+
Sbjct: 182 AAVAVEAAILANQGKGSVTADYRNKVRSLSLNIKDKNNPDLRVRVIERDIPADKLVTMTN 241
Query: 231 KEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSI 288
+E+ASDK + L ++F G + + +D ++CGRC K YQ +
Sbjct: 242 EELASDKRKREIEELQ------MQNLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTR 295
Query: 289 LDDYNLTRHVTCLNCNQYW 307
D +T VTC NCN W
Sbjct: 296 SADEPMTTFVTCTNCNHKW 314
>gi|297291110|ref|XP_001106919.2| PREDICTED: PHD finger protein 3 [Macaca mulatta]
Length = 2037
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 64/121 (52%), Gaps = 5/121 (4%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
NV + S D R+ VR L D L K ++ KV + KA +VA +E
Sbjct: 913 NVHPPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEE--KAA---KVATKIEKE 967
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
++ + ++ YK KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++
Sbjct: 968 LFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1027
Query: 241 W 241
W
Sbjct: 1028 W 1028
>gi|449497988|ref|XP_004176896.1| PREDICTED: PHD finger protein 3 isoform 2 [Taeniopygia guttata]
Length = 2069
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 13/112 (11%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S +EI+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 949 SLKEILMKRLTDSSLKIPEERAAKV-------------ATRIERELFSFFRDTDAKYKNK 995
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W ++
Sbjct: 996 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENR 1047
>gi|313225202|emb|CBY20996.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 29/287 (10%)
Query: 31 CIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ-----KIQKLAYDLISSWR-DMCW 84
+D L+ +K IT +LL S++ I H++ L+ +Q +I + LI W+ M
Sbjct: 25 AVDLLNALKEEKITKELLESSK-IGHVVNALRKGAQTSGHAEIAAQSKSLIKQWKAQMAQ 83
Query: 85 DVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIK-CNDSFREIVRE 143
+ + A K V+ + +E+ S + S+ I+ D R RE
Sbjct: 84 NAGGGDNGAPAK----VQKTESSSQKREKEKEKTSDSKDDFSLGASIQPTADPVRNKSRE 139
Query: 144 KLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE--KWCRSNGMYKFKYRCLLF 201
L AL + D+ DK V +A +E A+Y S+ Y+ K R
Sbjct: 140 LLQKAL--LVDK--DKFNPQFVSL-----MAAKIEEAIYNFHGNSSSDTKYRNKIRSRYS 190
Query: 202 NISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGL 261
N+ D +N D R V+ G + P+ + +M +EMAS ++Q K+ + H
Sbjct: 191 NLKDAKNPDLRDSVMTGVISPDKLASMKPEEMASKQLQELRKKFTKEA--INDHQM---A 245
Query: 262 SRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ +D++ CG+C K +Y Q + D +T V C+ C W
Sbjct: 246 QNEGTQTDMFSCGKCKSKKCTYTQLQTRSADEPMTTFVYCMACGNRW 292
>gi|254585479|ref|XP_002498307.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
gi|238941201|emb|CAR29374.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
Length = 298
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 47/285 (16%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVE- 102
T +LL T+V + K + +I KL +ISSW+ E + +KKAK+
Sbjct: 37 TEKLLRETKVGVEVNKFKKSQNAEIVKLVKRMISSWK---------ETINKSKKAKIQPQ 87
Query: 103 ----------NVKVEEVTNGEERRHDS--GNVPKKSISCMIKCN---DSFREIVREKLYD 147
N ++++ E R+ D + P+ S + + N R++V LYD
Sbjct: 88 SQQQQPSTSQNPSTQQLSPTEPRKQDKFVSSKPRNSKNDGVDTNIYNHKLRDMVIRALYD 147
Query: 148 ALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSN-GMYKFKYRCLLFNISD 205
AL+K S+ V +D K+ +E M + C N YK KYR + NI
Sbjct: 148 ALAKESEHPPSSV-LDSAKS---------IEEEMNKLNNCDENEKAYKDKYRIIYSNIIS 197
Query: 206 PENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIF--PVGLSR 263
N D + K+ G V + +++ KE+A + HL K + G +
Sbjct: 198 KNNPDLKHKITNGDVTSQYLVSCDPKELAPE-------HLKKKLEEIAKQNLHNAQGATI 250
Query: 264 KIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+ ++D + CG+C K+S YQ + D LT TC C W
Sbjct: 251 QRSITDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 295
>gi|119627992|gb|EAX07587.1| SPOC domain containing 1, isoform CRA_b [Homo sapiens]
Length = 644
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
E+ DS + ++ S I + ++E L+ L ++ D + ++ + A
Sbjct: 17 EQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAG----- 71
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
+E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ ++
Sbjct: 72 ---IEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQL 128
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 129 APQELARWRDQEEKRG 144
>gi|344304668|gb|EGW34900.1| hypothetical protein SPAPADRAFT_131482 [Spathaspora passalidarum
NRRL Y-27907]
Length = 296
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 20/252 (7%)
Query: 63 HPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNV 122
H + +I L +I +WRD V++ ++KK + T + N
Sbjct: 55 HENSEISNLVKKMIRNWRDA------VQHEKISKKKVSGSSTPSTPATPATPSSSTNLNS 108
Query: 123 PKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDP----IQVAILVE 178
+ + + V +LYD ++ + +A ++ V+ DP +++A +E
Sbjct: 109 IDGAKKIPTGPRNPKTDGVSTELYDNPTRNASVSALYTSL-AVERGDPSELILKIASEIE 167
Query: 179 SAMYE-KWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDK 237
S +++ ++ + Y+ K R N+ + +N + R ++L + I M+ EMA +
Sbjct: 168 SEVFKSEYSKVTDSYRNKLRSFTMNLRNKKNPELRERLLTQAILAANFIKMTPSEMAPES 227
Query: 238 IQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLT 295
++ L+K ++F G + K V+D + CG+C H K+S YQ + D LT
Sbjct: 228 LKKEIEKLNKQ------NLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLT 281
Query: 296 RHVTCLNCNQYW 307
TC NC W
Sbjct: 282 TFCTCENCGNRW 293
>gi|332253853|ref|XP_003276047.1| PREDICTED: PHD finger protein 3, partial [Nomascus leucogenys]
Length = 1807
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 700 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 746
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 747 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 792
>gi|449497990|ref|XP_004176897.1| PREDICTED: PHD finger protein 3 isoform 3 [Taeniopygia guttata]
gi|449497992|ref|XP_004176898.1| PREDICTED: PHD finger protein 3 isoform 4 [Taeniopygia guttata]
Length = 1981
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 13/112 (11%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S +EI+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 861 SLKEILMKRLTDSSLKIPEERAAKV-------------ATRIERELFSFFRDTDAKYKNK 907
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W ++
Sbjct: 908 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENR 959
>gi|426353656|ref|XP_004044303.1| PREDICTED: PHD finger protein 3-like [Gorilla gorilla gorilla]
Length = 1309
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 203 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 249
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 250 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 295
>gi|119627993|gb|EAX07588.1| SPOC domain containing 1, isoform CRA_c [Homo sapiens]
Length = 626
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
E+ DS + ++ S I + ++E L+ L ++ D + ++ + A
Sbjct: 12 EQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAG----- 66
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
+E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ ++
Sbjct: 67 ---IEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQL 123
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 124 APQELARWRDQEEKRG 139
>gi|443894971|dbj|GAC72317.1| transcription elongation factor TFIIS [Pseudozyma antarctica T-34]
Length = 321
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 173 VAILVESAMYEKWCRSN--GMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
A+ VE+A+ + + Y+ K R L NI D N D R +V+ + + ++ M+
Sbjct: 186 AAVAVEAAILANQGKGSVTADYRNKVRSLSLNIKDKNNPDLRVRVVERDIAADKLVTMTN 245
Query: 231 KEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSI 288
+E+ASDK + L ++F G + + +D ++CGRC K YQ +
Sbjct: 246 EELASDKRKREIEELQ------MQNLFKAKGAAAQEAETDAFQCGRCKQRKTRYYQMQTR 299
Query: 289 LDDYNLTRHVTCLNCNQYW 307
D +T VTC NCN W
Sbjct: 300 SADEPMTTFVTCTNCNHKW 318
>gi|241063664|ref|XP_002408196.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
gi|215492398|gb|EEC02039.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
Length = 1507
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 10/110 (9%)
Query: 141 VREKLYDALSKVSDEAAD-KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
VR+ L D+LS +A D ++ D VK ++A+ +E +++ + + YK KYR L
Sbjct: 816 VRKVLRDSLSNRCKDADDISLSGDEVK-----RMAVRIEEELFKYFKDTGTKYKSKYRSL 870
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW----NHHL 245
+FNI D NQ RK+L G + P+ ++ M+ +E+AS ++ W N H+
Sbjct: 871 VFNIKDTRNQGLFRKILKGKIAPDKLVRMTPEELASKELAKWRERENQHV 920
>gi|118088827|ref|XP_426199.2| PREDICTED: PHD finger protein 3 [Gallus gallus]
Length = 2065
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 13/112 (11%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S +EI+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 942 SLKEILMKRLTDSSLKIPEERAAKV-------------ATRIERELFSFFRDTDSKYKNK 988
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W ++
Sbjct: 989 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENR 1040
>gi|328351440|emb|CCA37839.1| Transcription elongation factor A protein 2 .l [Komagataella
pastoris CBS 7435]
Length = 329
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 113/277 (40%), Gaps = 43/277 (15%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T ++L T+V + + H + ++ L +I +W+D V+ KK K V +
Sbjct: 80 TEKVLRETKVGVTVNRLRSHANPEVGTLVKKIIKTWKD---------GVSQEKKKKAVSS 130
Query: 104 V----KVEEVTNGEERRHDSGNVPKKSISCMIKC-NDSFREIVREKLYDALSKVSDEAAD 158
K T ER G K+ ++ + R +Y AL+ SDE
Sbjct: 131 AGSPAKSTTSTTTNERFVSKGPRTPKNDGVKVEIYENKTRNGSISAIYTALAMDSDEQPS 190
Query: 159 KVTIDLVKACDPIQVAILVESAMYEKWCRS------NGMYKFKYRCLLFNISDPENQDFR 212
K+ +LVK EK C + Y+ K R L+ N+ + N R
Sbjct: 191 KI-FELVKDI--------------EKQCFKAVNFTVDDTYRNKLRSLIMNLKNKNNPTLR 235
Query: 213 RKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIY 271
R +L + P ++ MSA+E+A D ++ + K ++F G + V+D +
Sbjct: 236 RSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKK------NLFDAQGATENNSVTDRF 289
Query: 272 ECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
ECG+C K+SY Q + D LT C NC W
Sbjct: 290 ECGKCKQRKVSYFQKQTRSADEPLTTFCKCENCGNRW 326
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + PE I
Sbjct: 212 CD--KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGTISPELIAK 269
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+ C +C +Y Q
Sbjct: 270 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLLRCSKCKKKNCTYNQVQ 324
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 325 TRSADEPMTTFVLCNECGNRW 345
>gi|145234013|ref|XP_001400379.1| transcription elongation factor S-II [Aspergillus niger CBS 513.88]
gi|134057319|emb|CAK44518.1| unnamed protein product [Aspergillus niger]
gi|350635099|gb|EHA23461.1| hypothetical protein ASPNIDRAFT_37464 [Aspergillus niger ATCC 1015]
Length = 303
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 113/278 (40%), Gaps = 32/278 (11%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL ST+V + + +H S ++ +LA +++S WR + ++++ +
Sbjct: 42 TEDLLRSTRVGIAVNKLKQHKSPEVARLASEIVSKWRHEVNKQKAGASPGASQRSSSSPH 101
Query: 104 VKVEEVTNGEERRHDSGN---VPKKSISCMIKCNDSFREIVREK------LYDALSKVSD 154
K +G D + VP + D+ + R + +YD L S
Sbjct: 102 PKTNGTPSGGATPSDKASKLSVPPDKRTWKADGVDTNQTGNRIRDSCIGLMYDGLCLNSV 161
Query: 155 EAADKVTIDLVKACDPIQVAILVESAMYEK-WCRSNGMYKFKYRCLLFNISDPENQDFRR 213
E V + A VE+A + + Y+ K R L N+ + N R
Sbjct: 162 EPPRTV----------LSKASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPTLRV 211
Query: 214 KVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDI 270
+VL G V PE + MS E+ S + Q + + K D A+V R I S
Sbjct: 212 RVLNGDVTPEQFVRMSHDELRSAEQQERDRKIQKENMDKAMV------AQAERSISTS-- 263
Query: 271 YECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+CG+CG K++Y + D +T TC+NC + W
Sbjct: 264 LQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMNCGKSW 301
>gi|332862535|ref|XP_003317935.1| PREDICTED: PHD finger protein 3 isoform 1 [Pan troglodytes]
gi|410216400|gb|JAA05419.1| PHD finger protein 3 [Pan troglodytes]
gi|410258332|gb|JAA17133.1| PHD finger protein 3 [Pan troglodytes]
gi|410301720|gb|JAA29460.1| PHD finger protein 3 [Pan troglodytes]
gi|410354663|gb|JAA43935.1| PHD finger protein 3 [Pan troglodytes]
Length = 2039
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 934 SLKDILMKRLTDSNLKIPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 980
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 981 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1026
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP+N RR VL G + I
Sbjct: 212 CD--KMAAEIEDHIYQELKGTDMKYRNRVRSRISNLKDPKNPGLRRNVLCGAISAGRIAK 269
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+++CG+C +Y Q
Sbjct: 270 MTAEEMASDELKELRNAMTQE-AIREHQMAKTGGT----ATDLFQCGKCKKKNCTYNQVQ 324
Query: 287 SILDDYNLTRHVTCLNCNQYWVST 310
+ D +T V C C W +T
Sbjct: 325 TRSADEPMTTFVLCNECGNRWKAT 348
>gi|349802183|gb|AEQ16564.1| putative transcription elongation factor a protein 1 [Pipa
carvalhoi]
Length = 208
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 156 AADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKV 215
+AD +TI D ++ +E A+++++ ++ YK + R + N+ D +N + RR V
Sbjct: 72 SADYITI----GADDEELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDAKNPNLRRNV 127
Query: 216 LLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGR 275
L G++ + MSA+EMASD+++ +L K+ A+ + G ++ +D++ CG+
Sbjct: 128 LCGNIATDRFARMSAEEMASDELKEMRKNLTKE-AIREHQMARTGGTQ----TDLFSCGK 182
Query: 276 CGHNKISY-QHSSILDDYNLTRHVTC 300
C +Y Q + D +T V C
Sbjct: 183 CKKKNCTYTQVQTRSADEPMTTLVFC 208
>gi|397521935|ref|XP_003831038.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pan
paniscus]
Length = 2054
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 949 SLKDILMKRLTDSNLKIPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 995
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 996 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1041
>gi|397515906|ref|XP_003828182.1| PREDICTED: SPOC domain-containing protein 1 isoform 2 [Pan
paniscus]
Length = 1216
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
E+ DS + ++ S I + ++E L+ L ++ D + ++ +
Sbjct: 589 EQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRLRELPDPVLSEEVVE--------GI 640
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ ++
Sbjct: 641 AAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQL 700
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 701 APQELARWRDQEEKRG 716
>gi|397515904|ref|XP_003828181.1| PREDICTED: SPOC domain-containing protein 1 isoform 1 [Pan
paniscus]
Length = 1203
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
E+ DS + ++ S I + ++E L+ L ++ D + ++ +
Sbjct: 589 EQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRLRELPDPVLSEEVVE--------GI 640
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ ++
Sbjct: 641 AAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQL 700
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 701 APQELARWRDQEEKRG 716
>gi|354485811|ref|XP_003505075.1| PREDICTED: PHD finger protein 3-like [Cricetulus griseus]
Length = 2005
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ +L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 916 SLKDILMRRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDSKYKNK 962
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 963 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1008
>gi|332808286|ref|XP_003307989.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Pan troglodytes]
Length = 1204
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
E+ DS + ++ S I + ++E L+ L ++ D + ++ +
Sbjct: 590 EQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRLRELPDPVLSEEVVE--------GI 641
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ ++
Sbjct: 642 AAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQL 701
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 702 APQELARWRDQEEKRG 717
>gi|89365915|gb|AAI14431.1| SPOCD1 protein [Homo sapiens]
Length = 1203
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
E+ DS + ++ S I + ++E L+ L ++ D + ++ +
Sbjct: 589 EQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRLRELPDPVLSEEVVE--------GI 640
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ ++
Sbjct: 641 AAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQL 700
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 701 APQELARWRDQEEKRG 716
>gi|47271475|ref|NP_653170.3| SPOC domain-containing protein 1 [Homo sapiens]
gi|74749560|sp|Q6ZMY3.1|SPOC1_HUMAN RecName: Full=SPOC domain-containing protein 1
gi|47077409|dbj|BAD18592.1| unnamed protein product [Homo sapiens]
Length = 1216
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
E+ DS + ++ S I + ++E L+ L ++ D + ++ +
Sbjct: 589 EQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRLRELPDPVLSEEVVE--------GI 640
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ ++
Sbjct: 641 AAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQL 700
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 701 APQELARWRDQEEKRG 716
>gi|358254214|dbj|GAA54231.1| transcription elongation factor S-II, partial [Clonorchis sinensis]
Length = 143
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+AI +ESA+Y+ + ++ YK + R + N+ D N + R VL+GHV P+ + +M+++E
Sbjct: 11 LAIRIESAIYDIFNNTDSKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVNPDKLASMTSEE 70
Query: 233 MASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQH 285
MAS +++ K+ + H V + +D+ +CG+C NK +Y
Sbjct: 71 MASKEMKELREKYTKE--TIEDHQMAVTGGTE---TDLLKCGKCKQNKCTYNQ 118
>gi|407929237|gb|EKG22072.1| Zinc finger TFIIS-type protein [Macrophomina phaseolina MS6]
Length = 302
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 171 IQVAILVESAMYEKW-CRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
+ VA VE A Y K+ ++ YK + R L N+ + N R++VL G ++PE + MS
Sbjct: 166 MAVAREVELAAYNKYQPETSAPYKERMRSLFQNLKNKSNPGLRKRVLAGEIRPEKFVTMS 225
Query: 230 AKEMASDKIQLWNHHLDKDG---ALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHS 286
++E+ S + + L+K+ A+V R I S CG+CG K+SY +
Sbjct: 226 SEELMSAERRAEAERLEKENMNKAMV------AQAERSISTS--LTCGKCGQKKVSYSQA 277
Query: 287 SILD-DYNLTRHVTCLNCNQYW 307
D +T C C W
Sbjct: 278 QTRSADEPMTTFCECTVCGNRW 299
>gi|238589160|ref|XP_002391938.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
gi|215457296|gb|EEB92868.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
Length = 125
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y+ + R L N+ D N R V+ G + + + MS+ EMAS++ Q + + ++
Sbjct: 11 YRARIRSLFVNLKDKNNPGLRESVVSGLIAADKLAKMSSAEMASEERQAADQKIKQENFF 70
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+ +G + +D ++CGRC K Y+ + D +T VTC NC W
Sbjct: 71 AS-----LGAEEQQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTNCGNRW 122
>gi|334324097|ref|XP_001372425.2| PREDICTED: PHD finger protein 3 [Monodelphis domestica]
Length = 2036
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 933 SLKDILMKRLTDSNLKIPEERAAKV-------------ATKIEKELFSFFRDTDAKYKNK 979
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 980 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1025
>gi|332862537|ref|XP_003317936.1| PREDICTED: PHD finger protein 3 isoform 2 [Pan troglodytes]
Length = 1951
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 846 SLKDILMKRLTDSNLKIPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 892
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 893 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 938
>gi|427779725|gb|JAA55314.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1186
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 141 VREKLYDALSKVSDEAAD-KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
VR+ L DAL EA+D ++ D V+ ++A+ +E +++ + + YK KYR L
Sbjct: 1021 VRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEELFKVFRDTGTRYKSKYRSL 1075
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
+FNI D NQ RK+L G + P+ ++ M+ +E+AS ++ W +K
Sbjct: 1076 VFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQENK 1123
>gi|28972117|dbj|BAC65512.1| mKIAA0244 protein [Mus musculus]
Length = 1184
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 72 SLKDILMKRLTDSNLKIPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 118
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 119 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 164
>gi|171687673|ref|XP_001908777.1| hypothetical protein [Podospora anserina S mat+]
gi|170943798|emb|CAP69450.1| unnamed protein product [Podospora anserina S mat+]
Length = 295
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 119/274 (43%), Gaps = 20/274 (7%)
Query: 39 KNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA 98
K + T + L ST+ + M + ++ I +LA +++S WR +D V + K +
Sbjct: 34 KEPAPTEEQLRSTKAGVVVGKMRSNTNKDIARLATEIVSKWRKNVDSAKDKRKVELAKDS 93
Query: 99 KLVENVKVEEVTNGEERRHDSGNVPKKSISC----MIKCNDSFREIVREKLYDALSKVSD 154
++V + + G+ ++ + + R+ LY+ L+ +
Sbjct: 94 PTPKSVSSPLPPSSSSNKPYEGDTERRHFKTDKVDLKRTGHQARDGCIGVLYNGLAYRAT 153
Query: 155 EAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRK 214
E+ ++V +++A+ VE+A + + Y+ K R L+ ++ +N ++
Sbjct: 154 ESVEEV----------VRLAMEVEAAAFRVFKGDTPEYRQKIRGLMTSLKRKDNPALGKR 203
Query: 215 VLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECG 274
V G + P+T + M+ E+ASD + + L ++ V ++ K I SD +CG
Sbjct: 204 VRSGAITPDTFVKMTDVELASDAQRAEDEKLQQENM----KKAQVPMAEKSI-SDALKCG 258
Query: 275 RCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+CG K+SY + D +T C C W
Sbjct: 259 KCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRW 292
>gi|198419645|ref|XP_002120544.1| PREDICTED: similar to transcription elongation factor A (SII) 1
[Ciona intestinalis]
Length = 298
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E A+Y ++ + YK + R N+ D N R VL G +KPE I M+A+E
Sbjct: 165 LAAAIEEAIYSEFKDTGVKYKNRIRSRFSNLKDTRNSILRLNVLNGILKPEQIAKMTAEE 224
Query: 233 MASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDD 291
MASD+++ ++ + H V K +D++ CGRC +Y Q + D
Sbjct: 225 MASDEMKKKREEYEQQN--IKDHQMSVNEGTK---TDMFVCGRCKGRACTYNQLQTRSAD 279
Query: 292 YNLTRHVTCLNCNQYW 307
+T V C C W
Sbjct: 280 EPMTTFVFCTECGNRW 295
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + PE I
Sbjct: 211 CD--KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAK 268
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+ C +C +Y Q
Sbjct: 269 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLLRCSKCKKKNCTYNQVQ 323
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 324 TRSADEPMTTFVLCNECGNRW 344
>gi|21749290|dbj|BAC03567.1| unnamed protein product [Homo sapiens]
Length = 696
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
E+ DS + ++ S I + ++E L+ L ++ D + ++ + A
Sbjct: 82 EQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRLRELPDPVLSEEVVEGIAAG----- 136
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
+E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ ++
Sbjct: 137 ---IEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQL 193
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 194 APQELARWRDQEEKRG 209
>gi|409041587|gb|EKM51072.1| hypothetical protein PHACADRAFT_263043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 303
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
D+ R+ E +YDAL+ S ++++ L KA I+ A L ++ YK
Sbjct: 141 GDATRDKCLELIYDALAFDSGAPSEQI---LGKA-KAIEAAALTDNGGV------TAAYK 190
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
K R L N+ D N R V+ G + M++ EMAS++ + ++ + ++ T
Sbjct: 191 AKIRTLFVNLKDKNNPGLRESVVAGDLPVTRFCKMTSAEMASEERKAADNRIREENLFKT 250
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+G +D ++CGRC K Y+ + D +T VTC CN W
Sbjct: 251 -----LGAEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRW 300
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + PE I
Sbjct: 211 CD--KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAK 268
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+ C +C +Y Q
Sbjct: 269 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLLRCSKCKKKNCTYNQVQ 323
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 324 TRSADEPMTTFVLCNECGNRW 344
>gi|242795417|ref|XP_002482584.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
gi|218719172|gb|EED18592.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 12/120 (10%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWN---HHLDKD 248
YK K R L N+ + N R++VL V PE + M+ +E+ SD+ + + H + D
Sbjct: 183 YKTKIRSLFQNLKNKSNPQLRQRVLSNEVTPEKFVKMTHEELKSDERRALDEKIHKENMD 242
Query: 249 GALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
A+ V + + I S + +CG+CG K++Y + D +T TCLNC + W
Sbjct: 243 KAM-------VAQAERSISSSL-QCGKCGQRKVTYTEAQTRSADEPMTLFCTCLNCGKSW 294
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + PE I
Sbjct: 211 CD--KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAK 268
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+ C +C +Y Q
Sbjct: 269 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLLRCSKCKKKNCTYNQVQ 323
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 324 TRSADEPMTTFVLCNECGNRW 344
>gi|426235316|ref|XP_004011630.1| PREDICTED: PHD finger protein 3 isoform 1 [Ovis aries]
Length = 2027
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 926 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 972
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 973 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1018
>gi|159164218|pdb|2DME|A Chain A, Solution Structure Of The Tfiis Domain Ii Of Human Phd
Finger Protein 3
Length = 120
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 19 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 65
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHH 244
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 66 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRR 114
>gi|426235318|ref|XP_004011631.1| PREDICTED: PHD finger protein 3 isoform 2 [Ovis aries]
Length = 1939
Score = 64.3 bits (155), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 838 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 884
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 885 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 930
>gi|320164226|gb|EFW41125.1| transcription elongation factor A [Capsaspora owczarzaki ATCC
30864]
Length = 433
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 122/298 (40%), Gaps = 41/298 (13%)
Query: 30 RCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQK-IQKLAYDLISSWRDMCWDVED 88
R + L ++ I+ LL T + + + K + +Q A +++ W+ C + E
Sbjct: 27 RSLVVLSELAKQPISVTLLSDTGIGKIVNNFGKRATNAAVQAEAKRVVALWKTAC-NAEG 85
Query: 89 VEYVAVTKK-----AKLVENVKVEEVTNGEERRHDSGNVPKK----------SISCMIKC 133
A A +N V+ E SG+ P + +IS ++
Sbjct: 86 AAAPATPTPVPAGFASQTQNAPTPTVSRAE----SSGSAPAEPARRSSVNSNAISTLVHT 141
Query: 134 NDSFREIVREKLYDAL-SKVSDEAADKVTIDLVKACDPIQVAI--LVESAMYEKWCRSNG 190
D+ R+ + L AL V+DE +++ V I+ +I L S + K
Sbjct: 142 GDAHRDSCIKALAKALDPTVTDET--QISEYFVSLAQSIEASIYKLHNSEVSPK------ 193
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGA 250
YK R +FN+ +N+DFR+ VL G + PE + M+++EMA+ ++ L +
Sbjct: 194 -YKTAVRSKMFNLK--QNEDFRKAVLNGSIPPEKVAVMTSEEMATKELNAERKKLTTEAM 250
Query: 251 LVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
P K+ +D CG+CG SY Q + D +T VTC C W
Sbjct: 251 NDAQMPAP-----KMSKTDQLRCGKCGKRDASYFQLQTRSSDEPMTTFVTCNVCGHNW 303
>gi|440911148|gb|ELR60861.1| PHD finger protein 3, partial [Bos grunniens mutus]
Length = 1943
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 845 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 891
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 892 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 937
>gi|390465645|ref|XP_003733445.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Callithrix jacchus]
Length = 1096
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Query: 118 DSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILV 177
DS + ++ S I + ++E L+ L ++ D + ++ +A +
Sbjct: 492 DSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRLRELPDLVLSEEVVE--------GIAAGI 543
Query: 178 ESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDK 237
E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS++++A +
Sbjct: 544 EAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVNPYDLVRMSSRQLAPQE 603
Query: 238 IQLWNHHLDKDG 249
+ W +K G
Sbjct: 604 LARWRDQEEKRG 615
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
+DS R RE L AL +D+ + +D CD +A +E +++++ ++ YK
Sbjct: 145 SDSVRNKCRELLVAALQ--TDDDYKTIGVD----CD--HLAAQIEHQIFQEFKSTDMKYK 196
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ D +N D RR VL G++ + I M+A+EMAS +++ L K+ ++
Sbjct: 197 ARLRSRISNLKDQKNPDLRRNVLCGNISAQRIACMTAEEMASAELKQIREALTKE-SIRE 255
Query: 254 GHIFPVGLSRKIIVSDIYECGRC-GHNKISYQHSSILDDYNLTRHVTCLNCNQYW 307
+ VG + +D++ C +C G N Q + D +T V C C W
Sbjct: 256 HQLSKVGGTE----TDMFICSKCHGKNCTYTQVQTRSADEPMTTFVLCNGCGNRW 306
>gi|121705046|ref|XP_001270786.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
gi|119398932|gb|EAW09360.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
Length = 304
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 57/291 (19%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL ST+V + +H S ++ +L+ +++S WR+ K K+ +
Sbjct: 42 TEDLLRSTRVGIIVNKFKQHKSPEVARLSSEIVSKWRNE------------VNKQKVSGS 89
Query: 104 VKVEEVTNGEER------RHDSGNVPKKSISCMI----------------KCNDSFREIV 141
V + ++G R +G P +S + + ++ R+
Sbjct: 90 PSVSQRSSGSPRPAPNGAASPAGTTPSDKMSKLSVPPDKRTWKADGVDVNQTSNKIRDSC 149
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLL 200
+YD L S E+ V L KAC VE+A + + Y+ K R L
Sbjct: 150 IGLMYDGLCLNSTESPRAV---LSKAC-------AVEAAAFSALGPETKEQYRTKIRSLY 199
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIF 257
N+ + N R +VL V PE + M+ E+ S + + + + K D A+V
Sbjct: 200 QNLKNKSNPTLRTRVLANDVTPEQFVKMTYDELKSAEQREQDRKIQKENMDKAMV----- 254
Query: 258 PVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
R I S +CG+CG K++Y + D +T TC+NC + W
Sbjct: 255 -AQAERSISTS--LQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMNCGKSW 302
>gi|26337609|dbj|BAC32490.1| unnamed protein product [Mus musculus]
Length = 371
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 204 SLKDILMKRLTDSNLKIPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 250
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 251 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 296
>gi|406865033|gb|EKD18076.1| transcription elongation factor S-II [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 301
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
LY+ L+ +S E + + + AI VE A ++ + Y+ K R L N+
Sbjct: 150 LYNGLAFMSTEPSSTIMVR----------AIEVEKAAFDAFKGDTPEYRSKLRSLFQNLK 199
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
N++ V+ G + PE + MS +E+ S + + + L KD V ++ K
Sbjct: 200 AISNRELAPAVMSGEIPPEKFVVMSHEELKSSERRKEDEKLQKDNMKKAQ----VPMAEK 255
Query: 265 IIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
I SD +CG+CG K+SY + D +T C C W
Sbjct: 256 SI-SDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRW 298
>gi|291396440|ref|XP_002714452.1| PREDICTED: PHD finger protein 3 [Oryctolagus cuniculus]
Length = 2194
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 1088 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 1134
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I M+ +E+AS ++ W
Sbjct: 1135 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMNPEELASKELAAW 1180
>gi|350296969|gb|EGZ77946.1| transcription elongation factor [Neurospora tetrasperma FGSC 2509]
Length = 298
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
LY+ L+ E+ ++V ++ AI VE+A+++ N Y+ K R L ++
Sbjct: 147 LYNGLAYRRTESIEEV----------VKRAIEVENALFKACKGENQEYRSKGRTLFTSLK 196
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
+N R+V+ G + E ++ +S KE+AS++ + + L+K+ V ++ K
Sbjct: 197 RKDNAALGRRVMSGELPVERLVVLSDKELASEEQRARDEELEKENM----KKAQVPMAEK 252
Query: 265 IIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
I SD +CG+CG K+SY + D +T C C W
Sbjct: 253 SI-SDALKCGKCGQRKVSYSQAQTRSADEPMTTFCECTVCGNRW 295
>gi|326673092|ref|XP_686400.5| PREDICTED: hypothetical protein LOC553518 [Danio rerio]
Length = 1738
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 107 EEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVK 166
+ G +H++ V +S R VR+ L + L K S E+ K++ D
Sbjct: 772 DSAQKGPNVKHETKKVKISPVSSKKPSTGHIRRSVRDSLEEILLKRSKESDLKISSD--- 828
Query: 167 ACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETII 226
P +VA E ++ + + YK KYR L FN+ D +N ++VL G V P ++
Sbjct: 829 --RPAEVARRTEKELFALFQGVDSKYKNKYRSLTFNLKDAKNNVLFKRVLKGEVSPADLV 886
Query: 227 NMSAKEMASDKIQLW 241
M+A+E+AS ++ W
Sbjct: 887 RMTAEELASKELAAW 901
>gi|148682474|gb|EDL14421.1| mCG4035 [Mus musculus]
Length = 2020
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 913 SLKDILMKRLTDSNLKIPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 959
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 960 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1005
>gi|124487309|ref|NP_001074549.1| PHD finger protein 3 [Mus musculus]
gi|187953739|gb|AAI37914.1| PHD finger protein 3 [Mus musculus]
Length = 2025
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ K+ +E A KV A +E ++ + ++ YK K
Sbjct: 913 SLKDILMKRLTDSNLKIPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 959
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 960 YRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1005
>gi|340914730|gb|EGS18071.1| putative transcription elongation factor [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 303
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 171 IQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
+Q A+ VE+A +E + Y+ K R L+ ++ +N + +V+ G + P + M+
Sbjct: 168 LQKAMEVEAAAFEVYKGDTPEYRSKIRGLMTSLKRKDNAELGDRVMKGEITPHQFVKMTE 227
Query: 231 KEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD 290
KE+AS+ +L + L+++ L V +++K I SD +C +C K+SY +
Sbjct: 228 KELASEAQRLRDAQLERENMLKAQ----VPMAQKSI-SDSLQCSKCKQKKVSYSQAQTRS 282
Query: 291 -DYNLTRHVTCLNCNQYW 307
D +T C C W
Sbjct: 283 ADEPMTTFCECTVCGHRW 300
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 126/289 (43%), Gaps = 48/289 (16%)
Query: 33 DALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQK--IQKLAYDLISSWRDMCWDVEDVE 90
D L+Q+K IT +L T+ I + +L+ S + +Q +A LI SW+ + D +D
Sbjct: 30 DLLNQLKKLPITLDILQKTR-IGMTVNVLRKASDREDVQIIAKSLIKSWKKL-LDSQDK- 86
Query: 91 YVAVTKKAKLVENVKVEEVTNGEE-RRHDSGNVPKKSISCMIKCNDSFREIVREKLYDAL 149
K + EN +++ ++ ++ S +V KS + K + + R ++ + +L
Sbjct: 87 ----VKAKSIPENDSSTVISSNQDIKKPSSNSVAMKSFN-KNKGDAAVRSQCQQMIASSL 141
Query: 150 SKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQ 209
S+ D DP +A +E+ ++ + +N Y+ K + + N+ D N
Sbjct: 142 K--SENNPD---------YDPTNIAAAIENEIFMCFKDTNIKYRNKIKSKVMNLRDKRNP 190
Query: 210 DFRRKVLLGHVKPETIINMSAKEMASDKIQ----------LWNHHLDKDGALVTGHIFPV 259
+ + V+ G + PE M+A+EMASD+++ + H L TG
Sbjct: 191 ELCQLVIEGVITPERFAKMTAEEMASDEMKKERKKITEEAIKEHQLATTAGTATGQ---- 246
Query: 260 GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++CG+CG +Y Q + D +T V C+ C W
Sbjct: 247 -----------FKCGKCGKRNTTYNQVQTRSADEPMTTFVYCIECGNRW 284
>gi|402853722|ref|XP_003891539.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Papio anubis]
Length = 1199
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
ER DS + ++ S I + ++E L+ L ++ D + ++VK +
Sbjct: 585 ERAEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWTRLRELPDSVLSE---EVVKG-----I 636
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V ++ MS+ ++
Sbjct: 637 AAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQL 696
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 697 APQELARWRDQEEKRG 712
>gi|403215573|emb|CCK70072.1| hypothetical protein KNAG_0D03260 [Kazachstania naganishii CBS
8797]
Length = 309
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVE---SAMYEKWCRSNGM 191
+ R+ V LYDAL+K S+ V +Q A+ +E +A+Y+ S
Sbjct: 146 NKLRDSVVRALYDALAKDSEHPPSSV----------LQTAVDIEKEMNALYD-HVTSEKQ 194
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK KYR + NI N D + K+ G + P+ ++ KE+A + H K +
Sbjct: 195 YKEKYRIVYSNIISRNNPDLKFKITNGDLTPQFVVQCDPKELAPE------HLRQKIEEI 248
Query: 252 VTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
++F G + + V+D ++CG+C K+S YQ + D LT TC C W
Sbjct: 249 TKQNLFNAQGATIERSVTDRFQCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306
>gi|196008337|ref|XP_002114034.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
gi|190583053|gb|EDV23124.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
Length = 302
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 134/312 (42%), Gaps = 51/312 (16%)
Query: 25 VVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQ-KLAYDLISSWRDMC 83
+V+ +D L +K+ +T ++L T+V H+ + K +++ LA LI W+ +
Sbjct: 22 IVDNEFILDLLTNLKDLKMTLEILQKTRVGYHVNNVRKKADKEVVINLAKSLIKDWKRLL 81
Query: 84 WDVE-------------DVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCM 130
D + D + + +++++ ++ VEE N H S N K +
Sbjct: 82 PDSKKNEAKDKTDSRQMDKDSQDLIQQSEINPSLMVEEKDNTTV--HQSHNNDKDM--QV 137
Query: 131 IKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNG 190
+ + R++ R+ L ALS+ + A++++ N
Sbjct: 138 LSSGNPTRDLSRKLLIGALSRDG-----------------------LNKAIFKELKGPNM 174
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGA 250
YK + R + N+ D +N + +KVL G + PE I M+A+EMASD+++ K+G
Sbjct: 175 KYKNRVRSRISNLKDSKNPNLCQKVLSGIITPEQIAKMTAEEMASDEMKKLRQGYAKEGI 234
Query: 251 LVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW-- 307
G +D+ CG+C SY Q + D +T V C C W
Sbjct: 235 RDAQMAVTQGTK-----TDLLTCGKCHKKNCSYNQMQTRSADEPMTTFVFCHECGHRWKL 289
Query: 308 -VSTNLS-FGVL 317
VS+ +S FG++
Sbjct: 290 LVSSYMSLFGIV 301
>gi|157817961|ref|NP_001102261.1| PHD finger protein 3 [Rattus norvegicus]
gi|149046439|gb|EDL99332.1| PHD finger protein 3 (predicted) [Rattus norvegicus]
Length = 2020
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
NV + + + D R+ VR L D L K ++ K+ + +VA +E
Sbjct: 894 NVHPPAAAAIKPSADQIRQSVRHSLKDILMKRLTDSNLKIPEE-----KSAKVATKIEKE 948
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
++ + ++ YK KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++
Sbjct: 949 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1008
Query: 241 W 241
W
Sbjct: 1009 W 1009
>gi|45549559|ref|NP_573049.2| CG8117 [Drosophila melanogaster]
gi|45446964|gb|AAF48482.2| CG8117 [Drosophila melanogaster]
gi|66571116|gb|AAY51523.1| IP08861p [Drosophila melanogaster]
gi|66772509|gb|AAY55566.1| IP09061p [Drosophila melanogaster]
gi|220943416|gb|ACL84251.1| CG8117-PA [synthetic construct]
gi|220953346|gb|ACL89216.1| CG8117-PA [synthetic construct]
Length = 162
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E A+Y YK + R L N+ DP+N + R+K LLG + PE + M
Sbjct: 28 DPDDMAAKLEDAIYGDLNGCKVKYKNRIRSRLANLRDPKNPELRQKFLLGQITPEELSKM 87
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSI 288
+ +EMASD ++ +D ++ + V ++ +D ++C RC S H
Sbjct: 88 TPEEMASDDMKQMRQKYVQD-SINAAQMAKVQGTK----TDQFKCERCDKRNCSQLHIRD 142
Query: 289 LDDYNLTRHVTCLNCNQYWVS 309
D+ +T V C C W S
Sbjct: 143 GDEPIIT-FVICDECGNRWKS 162
>gi|340376666|ref|XP_003386853.1| PREDICTED: transcription elongation factor A protein 2-like
[Amphimedon queenslandica]
Length = 314
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 18/213 (8%)
Query: 102 ENVKVEEVTNGEERRHDSG-NVPKKSISC-----MIKCNDSFREIVREKLYDALSKVSDE 155
+N + +NG S VP+ S+S + +++ R R+ +Y A+ K +E
Sbjct: 110 QNSSAQPTSNGSTTPTSSTMPVPEFSLSIDGSSRVPPTSNAVRNTCRDMVYKAMKKGLNE 169
Query: 156 AADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKV 215
+++ ++ +E ++ ++ +N YK + R + NI D +N ++K+
Sbjct: 170 ------VNIEDDTRLYNLSAAIEDQIFSEFKDTNMKYKNRVRSRVSNIGDLKNPGLKQKI 223
Query: 216 LLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGR 275
+ G + P I MS +EMAS+ ++ K+ + G SD+ +CG+
Sbjct: 224 ISGEISPARIAKMSTEEMASEDMKKLRQEYTKEAIRDSQMAVTQGTK-----SDLLKCGK 278
Query: 276 CGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
CG SY Q + D +T V C C W
Sbjct: 279 CGKRNCSYNQMQTRSADEPMTTFVLCNECGHRW 311
>gi|317418995|emb|CBN81033.1| Death-inducer obliterator 1 [Dicentrarchus labrax]
Length = 2389
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 134 NDSFREIVREKLYDALSK-VSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
N+ R+ +R L D L K VSD K+T V ++A+ +E M+ ++ Y
Sbjct: 658 NNQMRQNIRRSLTDILYKRVSDSDDLKMTESEVG-----RLAVAIEKEMFNLCLSTDSKY 712
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
K KYR L+FN+ DP+N+ +V+ G V P ++ +SA+E+ S +I W
Sbjct: 713 KNKYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLSKEISEW 761
>gi|321466977|gb|EFX77969.1| hypothetical protein DAPPUDRAFT_53771 [Daphnia pulex]
Length = 299
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
P +A ++E +Y+++ ++ YK + R + N+ D N + R L G V P + NM+
Sbjct: 163 PEYLAQMLEECIYKEFRNTDMKYKNRVRSRVSNLKDARNPNLRLNFLCGQVSPARLSNMT 222
Query: 230 AKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSI 288
++EMASD+++ K+ ++ + V ++ +D+ +CG+CG +Y Q +
Sbjct: 223 SEEMASDEMKNIRQKFTKE-SINDAQLATVQGTQ----TDLLKCGKCGKRNCTYNQVQTR 277
Query: 289 LDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 278 SADEPMTTFVLCNACGNRW 296
>gi|325183258|emb|CCA17716.1| transcription elongation factor putative [Albugo laibachii Nc14]
gi|325183904|emb|CCA18362.1| transcription elongation factor putative [Albugo laibachii Nc14]
Length = 309
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 124/303 (40%), Gaps = 46/303 (15%)
Query: 31 CIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDM-------- 82
+D L +++ IT +L T++ + + + KH S+KIQ + +LI SW+ +
Sbjct: 25 ALDLLRALESKPITVNILKETKLGQTVAKLRKHDSEKIQNQSRNLIHSWKSILTLSPRTN 84
Query: 83 -CWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIV 141
+ + K A + K V + + S + S S + D R V
Sbjct: 85 SSSSLSPTAAGTLAKSASSISKPKSPSVETPKRKETKSSS----SASFLPPGLDKMRATV 140
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC-----RSNGMYKFKY 196
R K+ + L E AD D A D VA +E AM + + Y K+
Sbjct: 141 RTKMKENL-----ELAD---ADTSNAPD---VATAIEIAMARMFSVGFPGENKKDYTAKF 189
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK--DGALVTG 254
R L FN+ +N R +LL V E +INMS +E+A+D+ + H ++K D A
Sbjct: 190 RQLSFNLK--KNARLREDLLLDVVSAEQLINMSPEELATDEKR---HEIEKLRDDAFQRA 244
Query: 255 HIFPVGLSRKII---------VSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCN 304
+ + I ++ CGRC +K S Q + D +T V C NC
Sbjct: 245 RLDWADANEDKINKQCGIEKNSKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVQCHNCG 304
Query: 305 QYW 307
W
Sbjct: 305 NRW 307
>gi|85119699|ref|XP_965694.1| hypothetical protein NCU02563 [Neurospora crassa OR74A]
gi|28927506|gb|EAA36458.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567143|emb|CAE76438.1| related to transcription elongation factor TFIIS [Neurospora
crassa]
gi|336464865|gb|EGO53105.1| hypothetical protein NEUTE1DRAFT_73389 [Neurospora tetrasperma FGSC
2508]
Length = 298
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
LY+ L+ E+ ++V ++ A+ VE+A+++ N Y+ K R L ++
Sbjct: 147 LYNGLAYRRTESIEEV----------VKRAVEVENALFKACKGENQEYRSKGRTLFTSLK 196
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
+N R+V+ G + E ++ +S KE+AS++ + + L+K+ V ++ K
Sbjct: 197 RKDNAALGRRVMSGELPVERLVVLSDKELASEEQRARDEELEKENM----KKAQVPMAEK 252
Query: 265 IIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
I SD +CG+CG K+SY + D +T C C W
Sbjct: 253 SI-SDALKCGKCGQRKVSYSQAQTRSADEPMTTFCECTVCGNRW 295
>gi|149732314|ref|XP_001503413.1| PREDICTED: PHD finger protein 3 isoform 1 [Equus caballus]
Length = 2042
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
NVP + S D R+ VR L D L K ++ KV + KA +VA +E
Sbjct: 917 NVPPPA-STSKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEE--KAA---KVATKIEKE 970
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
++ + ++ YK KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++
Sbjct: 971 LFCFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 1030
Query: 241 W 241
W
Sbjct: 1031 W 1031
>gi|149732316|ref|XP_001503414.1| PREDICTED: PHD finger protein 3 isoform 2 [Equus caballus]
Length = 1954
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 121 NVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESA 180
NVP + S D R+ VR L D L K ++ KV + KA +VA +E
Sbjct: 829 NVPPPA-STSKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEE--KAA---KVATKIEKE 882
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
++ + ++ YK KYR L+FN+ DP+N +KVL G V P+ +I MS +E+AS ++
Sbjct: 883 LFCFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAA 942
Query: 241 W 241
W
Sbjct: 943 W 943
>gi|3133178|dbj|BAA28177.1| unnamed protein product [Mus musculus]
Length = 292
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + PE I
Sbjct: 156 CD--KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAK 213
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+ C +C +Y Q
Sbjct: 214 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLLRCSKCKKKNCTYNQVQ 268
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 269 TRSADAPMTTFVLCNECGNRW 289
>gi|119492710|ref|XP_001263674.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
gi|119411834|gb|EAW21777.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
Length = 304
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 115/291 (39%), Gaps = 57/291 (19%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL ST+V + +H S ++ +L+ +++S WR+ K K +
Sbjct: 42 TEDLLRSTRVGIIVNKFKQHKSPEVARLSSEIVSKWRNE------------VNKQKASGS 89
Query: 104 VKVEEVTNGEER------RHDSGNVPKKSISCMI----------------KCNDSFREIV 141
V + ++G R +G P +S + + ++ R+
Sbjct: 90 PSVSQRSSGSPRPAQNGTASPAGTTPSDKLSKLSVPPDKRTWKADGVDINQTSNKIRDSC 149
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLL 200
+YD L S E+ V L KAC VE+A + + Y+ K R L
Sbjct: 150 IGLMYDGLCLNSTESPRAV---LSKAC-------AVEAAAFSALGPETKEQYRTKIRSLY 199
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIF 257
N+ + N R +VL V PE + MS E+ S + + + K D A+V
Sbjct: 200 QNLKNKSNPTLRVRVLSNEVTPEQFVKMSHDELKSAEQREQERKIQKENMDKAMV----- 254
Query: 258 PVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
R I S +CG+CG K++Y + D +T TC+NC + W
Sbjct: 255 -AQAERSISTS--LQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMNCGKSW 302
>gi|358387656|gb|EHK25250.1| hypothetical protein TRIVIDRAFT_81951 [Trichoderma virens Gv29-8]
Length = 304
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 41/287 (14%)
Query: 39 KNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA 98
K++S T ++L +T+ + + +P+++I + A +L+ W+
Sbjct: 38 KDASPTEEMLRATRAGVFVGKLRSNPNKEIARAASELVIKWK------------------ 79
Query: 99 KLVE---NVKVEEVTNGEERRHDSGNVPKKSISCMIK-CNDSFREIVREKLYDALS---K 151
KLVE N K+++ G + ++P S S +F+ ++ +D K
Sbjct: 80 KLVEQEKNSKLQKAKTGSPSAPAAASLPNPSSSTPSGGAKKAFKGDPEKRKFDTDGVSIK 139
Query: 152 VSDEAADKVTIDLV----------KACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLF 201
++ I L+ D I A+ VE+A + + YK K R L
Sbjct: 140 RTESNVRNQCIGLIYNGLAYRSTESETDVIAKAVAVENAAFTLFNGEGAEYKKKIRSLFS 199
Query: 202 NISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGL 261
N+ N+D ++V+ G + P + M+ +++ S+ Q + + V +
Sbjct: 200 NLKSKTNRDLGKRVMSGDITPSRFVTMTDEDLKSED-QKKMEKELEKENMKKAQ---VPM 255
Query: 262 SRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ K I SD ECG+C K+SY Q + D +T C+NC W
Sbjct: 256 AEKSI-SDSLECGKCKKKKVSYTQAQTRSADEPMTTFCECMNCGNRW 301
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 28/151 (18%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD + I E +Y++ ++ YK + R + N+ DP+N RR VL G ++ I +
Sbjct: 384 CDSMGAEI--EDYIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGSIELSRIAS 441
Query: 228 MSAKEMASDKI-QLWN---------HHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCG 277
MSA+EMASD++ QL N H + K G T D+ +CG+C
Sbjct: 442 MSAEEMASDELKQLRNVLTQEAIREHQMAKTGGTTT---------------DLLQCGKCN 486
Query: 278 HNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+Y Q + D +T V C C W
Sbjct: 487 KKNCTYNQVQTRSADEPMTTFVLCNECGYRW 517
>gi|402218151|gb|EJT98229.1| transcription elongation factor [Dacryopinax sp. DJM-731 SS1]
Length = 311
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 22/183 (12%)
Query: 131 IKCNDSF---REIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWC 186
+K NDS R+ LYDAL+ S +D++ ++A +E +
Sbjct: 142 VKLNDSGDEKRDTCMRLLYDALASDSTAPSDQIA----------KIARKIEEQVLSLNKN 191
Query: 187 RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLD 246
S Y+ K R L N+ + N R V+ G + + MS +EMAS++ Q + ++
Sbjct: 192 NSGNPYRTKIRSLYLNLKEKSNPGLREAVVSGELSVPRLCTMSVQEMASEERQAESKRIE 251
Query: 247 KDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCN 304
+ ++F G +D ++C RCG K Y Q + D +T VTC+NC
Sbjct: 252 EQ------NLFKAKGAEEAGAETDAFKCFRCGLRKTRYTQAQTRSADEPMTTFVTCVNCG 305
Query: 305 QYW 307
W
Sbjct: 306 NRW 308
>gi|328709087|ref|XP_001946550.2| PREDICTED: hypothetical protein LOC100167834 [Acyrthosiphon pisum]
Length = 1750
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 123 PKKSISCMIKCNDSFREIVREKLYDALS-KVSDEAADKVTIDLVKACDPIQVAILVESAM 181
P K I K + R VR+ L ++LS ++S+E K D ++ + +E +
Sbjct: 975 PVKEIFNEKKGEEQLRSNVRKSLLESLSSRISEEPELKTA-----EQDLEELILKIEEEL 1029
Query: 182 YEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
Y ++ + + YK KYR LLFNI DP+N +F +K++ V P ++ M+A EMAS ++ W
Sbjct: 1030 YNQFSKVDQKYKTKYRSLLFNIKDPKNLNFFKKIMFKWVTPYQLVRMTADEMASQELAEW 1089
Query: 242 NHHLDK 247
+K
Sbjct: 1090 RERENK 1095
>gi|91834|pir||PS0180 transcription elongation factor S-II-related protein L122, hepatic
- mouse (fragment)
Length = 289
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + PE I
Sbjct: 153 CD--KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAK 210
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+ C +C +Y Q
Sbjct: 211 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLLRCSKCKKKNCTYNQVQ 265
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 266 TRSADEPMTTFVLCNECGNRW 286
>gi|169780530|ref|XP_001824729.1| transcription elongation factor S-II [Aspergillus oryzae RIB40]
gi|238505302|ref|XP_002383880.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|83773469|dbj|BAE63596.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689994|gb|EED46344.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|391872022|gb|EIT81165.1| transcription elongation factor TFIIS/Cofactor of enhancer-binding
protein [Aspergillus oryzae 3.042]
Length = 304
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNI 203
+YD L S EA V + A VE+A Y+ + Y+ K R L N+
Sbjct: 153 MYDGLCLNSTEAPRNV----------LSKASAVEAAAYKSLGPETKEQYRTKIRSLFQNL 202
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVG 260
+ N R +VL V P+ + MS E+ SD+ + + + K D A+V
Sbjct: 203 KNKSNPSLRIRVLSNDVTPDQFVRMSHDELRSDEQREKDAKIQKENMDKAMV------AQ 256
Query: 261 LSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
R I S +CG+CG K++Y + D +T TCLNC + W
Sbjct: 257 AERSISTS--LQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLNCGKSW 302
>gi|19114535|ref|NP_593623.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe
972h-]
gi|1351227|sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName:
Full=TFIIS
gi|924620|gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
gi|12038919|emb|CAC19733.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
Length = 293
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 126/283 (44%), Gaps = 25/283 (8%)
Query: 32 IDALDQIKNSSI-TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVE 90
I+ + ++KN + T +LL T++ + + HP++K+ + A +++ W+ DV
Sbjct: 26 INIMTRLKNEVVATEELLKETRLGLVVGKLRSHPNEKVGEQAREIVKKWK---ADVSKGR 82
Query: 91 YVAVTKKAKLVENVKVEEVTNGE---ERRHDSGNVPKKSISCMIK-CNDSFREIVREKLY 146
+ T + + + + +++ SG KS + + +D R +Y
Sbjct: 83 PLKTTTTTSSTPSKHADVGSQAQKQVQKQSSSGQRTFKSDNVNVNVTDDKIRNNCIGLMY 142
Query: 147 DALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDP 206
+AL SDE++ ++ + KA + I +L +A ++ Y+ + R L N+ D
Sbjct: 143 NALVIDSDESS---SLIIAKAKE-IDAQVLARAA-----GKTGSEYRNRMRSLYMNLKDK 193
Query: 207 ENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKI 265
N R VL + P+ + M++ E+AS+ +D L ++F G +
Sbjct: 194 NNPKLRASVLRNEITPQRLSTMTSAELASE------DRRKEDAKLEQENLFHAQGAKPQK 247
Query: 266 IVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
V+D++ CG+C K+S YQ + D +T C C W
Sbjct: 248 AVTDLFTCGKCKQKKVSYYQMQTRSADEPMTTFCECTVCGNRW 290
>gi|395856832|ref|XP_003800822.1| PREDICTED: SPOC domain-containing protein 1 [Otolemur garnettii]
Length = 1272
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 113 EERRHDSGNVP--KKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDP 170
+E DS + ++ + +IK + ++E L+ L ++ D + ++
Sbjct: 655 QEGAEDSAQLQPQQEELPLVIKIRGTVARAMQEVLWSRLQELPDLVLHEEVVE------- 707
Query: 171 IQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
VA +E+A+++ +N YK KYR LLFN+ DP N D KV+ G V P ++ MS+
Sbjct: 708 -SVAASIEAALFDLTQGTNCRYKTKYRSLLFNLRDPRNMDLFLKVVHGDVSPHDLVRMSS 766
Query: 231 KEMASDKIQLWNHHLDKDG 249
++A ++ W +K G
Sbjct: 767 IQLAPQELARWRDQEEKRG 785
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+P ++AI +E A+Y ++ ++ YK + R + N+ DP+N R + G + + + M
Sbjct: 189 EPEEMAIELEEAIYAEFRNTDMKYKNRVRSRVANLKDPKNPTLRGNFMCGAITAQQLAKM 248
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ +EMASD+++ K+ A+ + V ++ +D+ +CG+C +Y Q +
Sbjct: 249 TPEEMASDEMKKLREKFVKE-AINDAQLATVQGTK----TDLLKCGKCKKRNCTYNQLQT 303
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 304 RSSDEPMTTFVMCNECGHRW 323
>gi|383422683|gb|AFH34555.1| SPOC domain-containing protein 1 [Macaca mulatta]
Length = 1199
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
ER DS + ++ S I + ++E L+ L ++ D + ++VK +
Sbjct: 585 ERAEDSAQLQQEKPSLYIGVRGTVVHSMQEVLWTRLRELPDLVLSE---EVVKG-----I 636
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V ++ MS+ ++
Sbjct: 637 AAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQL 696
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 697 APQELARWRDQEEKRG 712
>gi|355745090|gb|EHH49715.1| hypothetical protein EGM_00425 [Macaca fascicularis]
Length = 1212
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
ER DS + ++ S I + ++E L+ L ++ D + ++VK +
Sbjct: 585 ERAEDSAQLQQEKPSLYIGVRGTVVHSMQEVLWTRLRELPDLVLSE---EVVKG-----I 636
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V ++ MS+ ++
Sbjct: 637 AAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQL 696
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 697 APQELARWRDQEEKRG 712
>gi|355557769|gb|EHH14549.1| hypothetical protein EGK_00493 [Macaca mulatta]
Length = 1212
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
ER DS + ++ S I + ++E L+ L ++ D + ++VK +
Sbjct: 585 ERAEDSAQLQQEKPSLYIGVRGTVVHSMQEVLWTRLRELPDLVLSE---EVVKG-----I 636
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V ++ MS+ ++
Sbjct: 637 AAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQL 696
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 697 APQELARWRDQEEKRG 712
>gi|291233503|ref|XP_002736692.1| PREDICTED: transcription elongation factor A 1-like [Saccoglossus
kowalevskii]
Length = 138
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK + R + N+ D N R++VL G + PE I NM+A+EMASD+++ L K+ A+
Sbjct: 24 YKTRVRSRVANLKDVRNPILRQQVLCGSIPPEKIANMTAEEMASDRLKELRRELTKE-AI 82
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ + + +CG+C +Y Q + D +T V C C W
Sbjct: 83 REAQMSTTGGTK----TSLLKCGKCKKRNCTYNQVQTRSADEPMTTFVFCNECGNRW 135
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 34/192 (17%)
Query: 127 ISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC 186
+S ++ DS R+ E L AL + D+ D T C+ + I E +Y++
Sbjct: 238 LSPRLQTGDSIRDKCIEMLTAAL-RTDDDYKDYGT-----NCEAMGAEI--EDYIYQETK 289
Query: 187 RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI-QLWN--- 242
++ YK + R + N+ DP+N + R+ VL G ++ I +M+A+EMASD++ QL N
Sbjct: 290 ATDMKYKNRVRSRISNLKDPKNPNLRKNVLAGAIELSRIASMTAEEMASDELKQLRNVLT 349
Query: 243 ------HHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLT 295
H + K G T D+ +CG+C +Y Q + D +T
Sbjct: 350 QEAIREHQMAKTGGTTT---------------DLLQCGKCKKKNCTYNQVQTRSADEPMT 394
Query: 296 RHVTCLNCNQYW 307
V C C W
Sbjct: 395 TFVLCNECGNRW 406
>gi|406699653|gb|EKD02852.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 8904]
Length = 317
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 188 SNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
S Y+ K R L NI D N R +++LG V P+ ++ MS +EMAS+ ++L N
Sbjct: 200 SGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEEMASESVRLLNEK--- 256
Query: 248 DGALVTGHIF---PVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLN 302
L ++F VG+++ +D ++C RC K + YQ + D +T H N
Sbjct: 257 ---LAEKNLFKAKAVGVTQ--AETDAFKCSRCQQRKCTYYQMQTRSADEPMTVHGELPN 310
>gi|410966896|ref|XP_003989963.1| PREDICTED: SPOC domain-containing protein 1 [Felis catus]
Length = 1178
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 116 RHDSGNVP--KKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
R DS + ++ +S I + +RE L+ L ++ D + + +
Sbjct: 551 REDSAQLQPQQEKLSLDIGVRGAVVHAMREVLWSRLQELPDLVLSEEAVG--------GI 602
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E+A+++ +N YK KYR LLFN+ DP N D KVL G V P ++ MS+ ++
Sbjct: 603 AADIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVLQGDVTPHGLVRMSSTQL 662
Query: 234 ASDKIQLWNHHLDKDG 249
A ++ W +K G
Sbjct: 663 APQELARWRDQEEKRG 678
>gi|367006041|ref|XP_003687752.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
gi|357526057|emb|CCE65318.1| hypothetical protein TPHA_0K01860 [Tetrapisispora phaffii CBS 4417]
Length = 303
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 126/279 (45%), Gaps = 31/279 (11%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRD-------MCWDVEDVEYVAVTK 96
T +LL T+V + K + +I KL +I++W+D + + ++
Sbjct: 38 TEKLLRETKVGIEVNKFKKSTNPEISKLVRKIITNWKDSINKHKKLKTQNSQKDLSKESQ 97
Query: 97 KAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKC------NDSFREIVREKLYDALS 150
+A V ++K E + E + D + KK+ + + C ND R+ V + LYDAL+
Sbjct: 98 QANAV-SLKDESGASNEANKQDKY-ITKKTRNTINDCVDTAIYNDDLRDRVIKALYDALA 155
Query: 151 KVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQD 210
K S E + ++ VK + +Q+ L S EK Y+ +YR + N+ N D
Sbjct: 156 KES-EHPPQAILNTVKDIE-LQMHNLHNSETDEK------AYRERYRIIYSNVISKNNPD 207
Query: 211 FRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSD 269
+ K+ G V E + S+K++A + ++ + K ++F G + + V+D
Sbjct: 208 LKHKITNGEVTAEFLSKCSSKDLAPEYLKQKMDEISK------QNLFNAQGATIERSVTD 261
Query: 270 IYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+ CG+C K+S YQ + D LT TC C W
Sbjct: 262 RFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 300
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E +Y++ ++ Y+
Sbjct: 184 GDSVRDKCVEMLSAALK------ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYR 235
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 236 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AIRE 294
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYWVSTNL 312
+ G + +D+++C +C +Y Q + D +T V C C W ++L
Sbjct: 295 HQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKVSSL 350
Query: 313 SFGVLPI 319
P
Sbjct: 351 EDAEKPF 357
>gi|71000299|ref|XP_754844.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|66852481|gb|EAL92806.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|159127856|gb|EDP52971.1| transcription elongation factor S-II [Aspergillus fumigatus A1163]
Length = 304
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 114/291 (39%), Gaps = 57/291 (19%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL ST+V + +H S ++ +L+ +++S WR+ K K +
Sbjct: 42 TEDLLRSTRVGIIVNKFKQHKSPEVARLSSEIVSKWRNEV------------NKHKASGS 89
Query: 104 VKVEEVTNGEER------RHDSGNVPKKSISCMI----------------KCNDSFREIV 141
V + ++G R +G P +S + + ++ R+
Sbjct: 90 PSVSQRSSGSPRPAQNGTASPAGTTPSDKLSKLSVPPDKRTWKADGVDINQTSNKIRDSC 149
Query: 142 REKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLL 200
+YD L S E+ V + A VE+A + + Y+ K R L
Sbjct: 150 IGLMYDGLCLNSTESPRAV----------LSKASAVEAAAFNALGPETKEQYRTKIRSLY 199
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIF 257
N+ + N R +VL V PE + MS E+ SD+ + + K D A+V
Sbjct: 200 QNLKNKSNPTLRVRVLSNEVTPEQFVKMSHDELKSDEQREQERRIQKENMDKAMV----- 254
Query: 258 PVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
R I S +CG+CG K++Y + D +T TC+NC + W
Sbjct: 255 -AQAERSISTS--LQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMNCGKSW 302
>gi|412991105|emb|CCO15950.1| predicted protein [Bathycoccus prasinos]
Length = 768
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 81 DMCWDVEDVEYVAVTKKAKLVENVKV--EEVTNGEERRHDSGNVPKKSISCMIKCNDSFR 138
++ W +++ + +++A+ EN K E E++++ G K + + R
Sbjct: 53 EVSWPLDESKMRVTSEEAR--ENAKRLKRERDKQREKKNNVGGAAGKRVEREKREIQQKR 110
Query: 139 EIVREKLYDALSKV-SDEAADKVTIDLVK-ACDPIQVAILVESAMYEKWCRSNGM-YKFK 195
+ V +K ++L+ ++E A VT + V+ A +P ++A+ +E A++E+ R G Y
Sbjct: 111 DNVAKKFEESLNVAKAEEEAIGVTANAVENALNPSEIAVGIERALFERCGRDTGKEYGVH 170
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
R L+FN+ DP+N R +VL +V ET++ M+ E+A+ ++ W
Sbjct: 171 ARSLMFNLRDPQNPTLRARVLHENVSAETLVKMTPAELANKELIEW 216
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + P I
Sbjct: 221 CD--KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAK 278
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+ C +C +Y Q
Sbjct: 279 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLLRCSKCKKKNCTYNQVQ 333
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 334 TRSADEPMTTFVLCNECGNRW 354
>gi|342878267|gb|EGU79622.1| hypothetical protein FOXB_09905 [Fusarium oxysporum Fo5176]
Length = 315
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
D I A+ VE A Y K+ YK K R L N+ + N++ R VL G + E + M
Sbjct: 170 DVITRAVAVEHAAYTKFKGETPDYKKKIRSLFTNLKNKSNRELGRSVLSGEITAEKFVIM 229
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ E+ S++ + L+K+ V ++ K I S+ ECGRC ++SY Q +
Sbjct: 230 TDDELKSEEQRKKELELEKENM----KKAQVPMAEKSI-SESLECGRCKKKQVSYTQAQT 284
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T C+ C W
Sbjct: 285 RAADEPMTTFCECMACGHRW 304
>gi|336262956|ref|XP_003346260.1| DST1 protein [Sordaria macrospora k-hell]
gi|380093589|emb|CCC08553.1| putative DST1 protein [Sordaria macrospora k-hell]
Length = 298
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
LY+ L+ E+ ++V ++ A+ VE+A+++ N Y+ K R L ++
Sbjct: 147 LYNGLAYRRTESIEEV----------VKRAVEVENALFKACKGENQEYRSKARTLFTSLK 196
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
+N R+V+ G + + ++ +S KE+AS++ + + L+K+ V ++ K
Sbjct: 197 RKDNAALGRRVMSGELPVDRLVVLSDKELASEEQRARDEELEKENM----KKAQVPMAEK 252
Query: 265 IIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
I SD +CG+CG K+SY + D +T C C W
Sbjct: 253 SI-SDALKCGKCGQRKVSYSQAQTRSADEPMTTFCECTVCGNRW 295
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD +A +E +Y++ ++ YK + R + N+ DP+N R+ VL G + I +
Sbjct: 350 CD--SMAAEIEDHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTLALSRIAS 407
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
MSA+EMASD+++ + L ++ A+ + G + +D+ +CG+C +Y Q
Sbjct: 408 MSAEEMASDELKQLRNTLTQE-AIREHQMAKTGGT----STDLLQCGKCKKKNCTYNQVQ 462
Query: 287 SILDDYNLTRHVTCLNCNQYW--VSTNLSF 314
+ D +T V C C W +++ L +
Sbjct: 463 TRSADEPMTTFVLCNECGNRWKGITSGLPY 492
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 28/155 (18%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + I
Sbjct: 417 CD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAK 474
Query: 228 MSAKEMASDKIQ----------LWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCG 277
M+A+EMASD+++ + H + K G T D+++C +C
Sbjct: 475 MTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTT---------------DLFQCSKCK 519
Query: 278 HNKISY-QHSSILDDYNLTRHVTCLNCNQYWVSTN 311
+Y Q + D +T V C C W ST+
Sbjct: 520 KKNCTYNQVQTRSADEPMTTFVLCNECGNRWKSTD 554
>gi|194207770|ref|XP_001916902.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Equus caballus]
Length = 1162
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 163 DLVKACDPIQ-VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVK 221
DLV + + ++ +A +E+A+++ +N YK KYR LLFN+ DP N D KV+ G V
Sbjct: 555 DLVLSEEAVEGIAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDVT 614
Query: 222 PETIINMSAKEMASDKIQLWNHHLDKDG 249
P+ ++ MS+ ++A ++ W +K G
Sbjct: 615 PQGLVQMSSIQLAPQRLAHWRDQEEKRG 642
>gi|116283511|gb|AAH29069.1| SPOCD1 protein [Homo sapiens]
Length = 266
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ +
Sbjct: 22 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 81
Query: 233 MASDKIQLWNHHLDKDGA 250
+A ++ W +K G
Sbjct: 82 LAPQELARWRDQEEKRGP 99
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E +Y++ ++ Y+
Sbjct: 185 GDSVRDKCVEMLSAALK------ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYR 236
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 237 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AIRE 295
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 296 HQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 346
>gi|441636142|ref|XP_003276474.2| PREDICTED: SPOC domain-containing protein 1 [Nomascus leucogenys]
Length = 1522
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ +
Sbjct: 945 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 1004
Query: 233 MASDKIQLWNHHLDKDG 249
+A ++ W +K G
Sbjct: 1005 LAPQELARWRDQEEKRG 1021
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 35/197 (17%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL D V D ++A +E +Y++ ++ Y+
Sbjct: 198 GDSVRDKCVEMLSAALKMDGDYKEYGVNCD--------KMASEIEDHIYQELKGTDMKYR 249
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ----------LWNH 243
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + H
Sbjct: 250 NRVRSRISNLKDPRNPSLRRNVLCGAISTSLIARMTAEEMASDELKELRSAMTLEAIREH 309
Query: 244 HLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLN 302
+ K G T D+++C +C +Y Q + D +T V C
Sbjct: 310 QMAKTGGTTT---------------DLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNE 354
Query: 303 CNQYW-VSTNLSFGVLP 318
C W V + +F V P
Sbjct: 355 CGNRWKVCISFAFIVPP 371
>gi|297665702|ref|XP_002811186.1| PREDICTED: SPOC domain-containing protein 1 [Pongo abelii]
Length = 1158
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ +
Sbjct: 595 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGAVTPYDLVRMSSMQ 654
Query: 233 MASDKIQLWNHHLDKDG 249
+A ++ W +K G
Sbjct: 655 LAPQELARWRDQEEKRG 671
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E +Y++ ++ Y+
Sbjct: 184 GDSVRDKCVEMLSAALK------ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYR 235
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 236 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AIRE 294
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 295 HQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 345
>gi|348570704|ref|XP_003471137.1| PREDICTED: SPOC domain-containing protein 1-like [Cavia porcellus]
Length = 1143
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E+A+++ + YK KYR LLFN+ DP N D KV+ G+V P ++ MS+ +
Sbjct: 565 IAADIEAALFDLMQGTTYRYKTKYRTLLFNLRDPRNPDLFLKVVHGNVTPHDLVRMSSVQ 624
Query: 233 MASDKIQLWNHHLDKDG--ALVTGHIFPVGL 261
+AS ++ W +K G ++V P GL
Sbjct: 625 LASQELARWRDQEEKKGLESIVQQQKEPCGL 655
>gi|33988379|gb|AAH07910.2| SPOCD1 protein, partial [Homo sapiens]
Length = 342
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E+A+++ +NG YK KYR LLFN+ DP N D KV+ G V P ++ MS+ +
Sbjct: 38 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 97
Query: 233 MASDKIQLWNHHLDKDG 249
+A ++ W +K G
Sbjct: 98 LAPQELARWRDQEEKRG 114
>gi|350585852|ref|XP_003482063.1| PREDICTED: SPOC domain-containing protein 1-like [Sus scrofa]
Length = 1288
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL 200
+RE L+ L ++ D + ++ +A +E+A+++ +NG Y+ KYR LL
Sbjct: 601 MREVLWSRLQELPDLVLSEGAVE--------GLAAGIEAALFDLTHATNGHYRTKYRSLL 652
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDG 249
FN+ DP N D KV+ G V P+ ++ M++ ++A ++ W +K G
Sbjct: 653 FNLRDPRNPDLFLKVIHGDVTPQGLVRMNSVQLAPQELARWRDQEEKRG 701
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E +Y++ ++ Y+
Sbjct: 184 GDSVRDKCVEMLSAALK------ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYR 235
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 236 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AIRE 294
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 295 HQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 345
>gi|195115581|ref|XP_002002335.1| GI17330 [Drosophila mojavensis]
gi|193912910|gb|EDW11777.1| GI17330 [Drosophila mojavensis]
Length = 323
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKAC-DPIQVAILVESAMYEKWCRSNGMYK 193
D+ R RE L +AL K+ + + + C +P ++A +E A+Y ++ ++ YK
Sbjct: 161 DAVRLKCREMLTNAL-KIGE---------VPEGCAEPEEMAAELEDAIYSEFKNTDMKYK 210
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP+N R + G V + + M+ +EMASD+++ K+ A+
Sbjct: 211 NRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKE-AIND 269
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ V ++ +D+ +CG+C +Y Q + D +T V C C W
Sbjct: 270 AQLATVQGTK----TDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRW 320
>gi|426328285|ref|XP_004024930.1| PREDICTED: transcription elongation factor A protein 3 [Gorilla
gorilla gorilla]
Length = 327
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E +Y++ ++ Y+
Sbjct: 163 GDSVRDKCVEMLSAALK------ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYR 214
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 215 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AIRE 273
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 274 HQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 324
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E +Y++ ++ Y+
Sbjct: 184 GDSVRDKCVEMLSAALK------ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYR 235
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 236 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AIRE 294
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 295 HQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 345
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E +Y++ ++ Y+
Sbjct: 184 GDSVRDKCVEMLSAALK------ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYR 235
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 236 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AIRE 294
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 295 HQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 345
>gi|125987179|ref|XP_001357352.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|195155927|ref|XP_002018852.1| GL25727 [Drosophila persimilis]
gi|54645683|gb|EAL34421.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|194115005|gb|EDW37048.1| GL25727 [Drosophila persimilis]
Length = 313
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+P ++A +E A+Y ++ ++ YK + R + N+ DP+N R + G V + + M
Sbjct: 176 EPEEMAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKM 235
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ +EMASD+++ K+ A+ + V ++ +D+ +CG+C +Y Q +
Sbjct: 236 TPEEMASDEMKKLREKFVKE-AINDAQLATVQGTK----TDLLKCGKCKKRNCTYNQLQT 290
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 291 RSADEPMTTFVMCNECGNRW 310
>gi|395526680|ref|XP_003765486.1| PREDICTED: uncharacterized protein LOC100925432 [Sarcophilus
harrisii]
Length = 1362
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 59/107 (55%), Gaps = 12/107 (11%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
DS RE++ ++L + + E A + +A +E+A+++ ++ YK
Sbjct: 774 DSLREVLLKRLQEPANLTVGEEAVR------------GIAANIEAAIFDLMQCTDYRYKT 821
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR L+FN+ DP N+D +V+ G + P+ ++ MSA E+AS ++ W
Sbjct: 822 KYRSLVFNLRDPRNKDLFLQVIRGDITPQGLVRMSATELASQELAQW 868
>gi|359318997|ref|XP_003638964.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Canis lupus familiaris]
Length = 1183
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 163 DLVKACDPIQ-VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVK 221
DLV + + ++ +A +E+A++ ++ YK KYR LLFN+ DP N D KV+ G V
Sbjct: 582 DLVLSEEAVEGIAAGIETALFNLTQTTSCRYKTKYRSLLFNLRDPRNPDLFLKVVRGDVT 641
Query: 222 PETIINMSAKEMASDKIQLWNHHLDKDG 249
PE ++ MS+ ++A ++ W +K G
Sbjct: 642 PEDLVQMSSIQLAPQELACWRDQEEKRG 669
>gi|440635961|gb|ELR05880.1| transcription elongation factor S-II [Geomyces destructans
20631-21]
Length = 301
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 27/275 (9%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T +L ST+ + +P + + +LA +++S W+ + + E V K +
Sbjct: 40 TEDILRSTKAGMIVAKQRANPDKAVARLASEIVSKWKTIV-EAEKRRKVGGAKPGTASPS 98
Query: 104 VKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREK----------LYDALSKVS 153
V+ + + + K + K + +I R LY+ L+ +S
Sbjct: 99 KNVDASSPAPPQPATDSDEWKGADPAKRKWQEDGVDIKRTGMPTRDNCVGLLYNGLAFMS 158
Query: 154 DEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRR 213
+ KV I A+ VE A + K+ Y+ K R L N+ + +N++
Sbjct: 159 KTSPTKV----------ILKAMEVEKAAFTKYKGDTPEYRAKMRSLFQNLKNKQNKELGP 208
Query: 214 KVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYEC 273
+VL G + + + M+ E+ S + + + L KD V ++ + I SD +C
Sbjct: 209 RVLSGEIPADKFVIMTHDELKSAERKKEDDELQKDNM----KRAQVPMAERSI-SDALKC 263
Query: 274 GRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
GRCG K+SY + D +T C C W
Sbjct: 264 GRCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRW 298
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + I
Sbjct: 211 CD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAK 268
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+++C +C +Y Q
Sbjct: 269 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQ 323
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 324 TRSADEPMTTFVLCNECGNRW 344
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + I
Sbjct: 212 CD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAK 269
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+++C +C +Y Q
Sbjct: 270 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQ 324
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 325 TRSADEPMTTFVLCNECGNRW 345
>gi|392572626|gb|EIW65771.1| hypothetical protein TREMEDRAFT_72529 [Tremella mesenterica DSM
1558]
Length = 335
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 31/177 (17%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMY-EKWCRSNGMY 192
++S R+ E +Y+AL+ D A++ ++ +E+A++ ++ +S Y
Sbjct: 184 DESVRDKCVEMIYNALA--GDSTAER--------------SVAIEAAVFKQQKSQSGNEY 227
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
+ K R L N+ D N R +++LG++ E + ++S ++MAS+ I+ N + D
Sbjct: 228 RAKMRSLFLNLKDKGNPGLRNEIVLGYLTAEKLASLSKEDMASESIRAMNEKIAND---- 283
Query: 253 TGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
++F + +D ++CGRC K + YQ + D +T NC W
Sbjct: 284 --NLFKAKAVGETQAETDAFKCGRCQQRKCTYYQMQTRSADEPMT------NCGNRW 332
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+P ++A +E A+Y ++ ++ YK + R + N+ DP+N R + G V + + M
Sbjct: 178 EPEEMAAELEDAIYAEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKM 237
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ +EMASD+++ K+ A+ + V ++ +D+ +CG+C +Y Q +
Sbjct: 238 TPEEMASDEMKKLREKFVKE-AINDAQLATVQGTK----TDLLKCGKCKKRNCTYNQLQT 292
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 293 RSADEPMTTFVMCNECGNRW 312
>gi|410920567|ref|XP_003973755.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Takifugu rubripes]
Length = 2311
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 134 NDSFREIVREKLYDALSK-VSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
N+ R+ +R L D L K VSD K+T V ++A +E M+ ++ Y
Sbjct: 639 NNQMRQNIRRSLTDILYKRVSDSDDLKMTESEVG-----RLAFAIEKEMFNLCLNTDSKY 693
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
K KYR L+FN+ DP+N+ +V+ G V P ++ +SA+E+ S ++ W
Sbjct: 694 KNKYRSLMFNLKDPKNKGLFYRVIGGDVTPFRLVRLSAEELLSKEMSEW 742
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E +Y++ ++ Y+
Sbjct: 185 GDSVRDKCVEMLSAALK------ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYR 236
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 237 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELKELRNAMTQE-AIRE 295
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 296 HQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 346
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAIL-VESAMYEKWCRSNGMY 192
DS R+ E L AL K D+ D ++ K I+ IL + S +Y++ ++ Y
Sbjct: 161 GDSVRDKCVEMLSAAL-KAEDDYKD-YGVNCDKMASEIEDHILELRSHIYQELKSTDMKY 218
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
+ + R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 219 RNRVRSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEEMASDELRELRNAMTQE-AIR 277
Query: 253 TGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 278 EHQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 329
>gi|67968616|dbj|BAE00667.1| unnamed protein product [Macaca fascicularis]
Length = 117
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK + R + N+ D +N + R+ VL G++ P+ M+A+EMASD+++ +L K+ A+
Sbjct: 3 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AI 61
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 62 REHQMAKTGGTQ----TDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 114
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E +Y++ ++ Y+
Sbjct: 156 GDSVRDKCVEMLSAALK------ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYR 207
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 208 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AIRE 266
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 267 HQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 317
>gi|294883920|ref|XP_002771106.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
gi|239874344|gb|EER02922.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
Length = 308
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 30/198 (15%)
Query: 119 SGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVE 178
SGN S+ + +C D R+ +R L+ AL + + +P A+ +E
Sbjct: 129 SGNTDLTSVMEVARCGDPKRDKIRNLLFKALRPRRNP----------EEAEPAVRAVEIE 178
Query: 179 SAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
+ K S Y + R + +N++D N DF+ KVL+G + +++++MAS+
Sbjct: 179 EECHSKL--SEREYLSQIRSIKYNLTDSSNPDFQWKVLVGLFPRDKYSTLTSEDMASEAK 236
Query: 239 QLWNHHLDK--------DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSIL 289
+ K D A+ G I G+ ++CG+C ++ +Y Q +
Sbjct: 237 NQHRANAAKAALEECQSDWAMRHGAIQKSGM---------FQCGKCRKSQTTYFQMQTRS 287
Query: 290 DDYNLTRHVTCLNCNQYW 307
D +T VTCLNC W
Sbjct: 288 SDEPMTTFVTCLNCGNKW 305
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + I
Sbjct: 189 CD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAK 246
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+++C +C +Y Q
Sbjct: 247 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQ 301
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 302 TRSADEPMTTFVLCNECGNRW 322
>gi|154320754|ref|XP_001559693.1| transcription elongation factor S-II [Botryotinia fuckeliana
B05.10]
gi|347838992|emb|CCD53564.1| similar to transcription elongation factor s-ii [Botryotinia
fuckeliana]
Length = 301
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A+ VE A ++ + YK K R L N+ N R++V+ G + P + M+ +E+
Sbjct: 169 AMAVEQAAFDHFGGETKEYKEKLRSLFQNLKQVSNTQLRKRVMSGDIDPARFVVMTHEEL 228
Query: 234 ASDKIQLWNHHLDKDGALVTGHI--FPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD- 290
S++++ KD AL ++ V ++ K I SD CG+CG K+SY +
Sbjct: 229 KSEEMK------KKDDALELENMKKAQVPMAEKSI-SDALTCGKCGQKKVSYSQAQTRSA 281
Query: 291 DYNLTRHVTCLNCNQYW 307
D +T C C W
Sbjct: 282 DEPMTTFCECQVCGHRW 298
>gi|240278909|gb|EER42415.1| transcription elongation factor S-II [Ajellomyces capsulatus H143]
gi|325090170|gb|EGC43480.1| transcription elongation factor S-II [Ajellomyces capsulatus H88]
Length = 306
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 171 IQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
+Q AI VE A Y + + Y+ K R L N+ + N D R +VL + P+ + M+
Sbjct: 171 LQKAIQVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRMT 230
Query: 230 AKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHS 286
E+ SD + + K D A+V R I S +CG+CG K++Y +
Sbjct: 231 HDELKSDAQREEERRIHKENMDKAMV------AKAERSISTS--LQCGKCGQKKVTYTEA 282
Query: 287 SILD-DYNLTRHVTCLNCNQYW 307
D +T TC+ C + W
Sbjct: 283 QTRSADEPMTLFCTCVVCGKSW 304
>gi|225560163|gb|EEH08445.1| transcription elongation factor S-II [Ajellomyces capsulatus
G186AR]
Length = 306
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 171 IQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
+Q AI VE A Y + + Y+ K R L N+ + N D R +VL + P+ + M+
Sbjct: 171 LQKAIQVELAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRMT 230
Query: 230 AKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHS 286
E+ SD + + K D A+V R I S +CG+CG K++Y +
Sbjct: 231 HDELKSDAQREEERRIHKENMDKAMV------AKAERSISTS--LQCGKCGQKKVTYTEA 282
Query: 287 SILD-DYNLTRHVTCLNCNQYW 307
D +T TC+ C + W
Sbjct: 283 QTRSADEPMTLFCTCVVCGKSW 304
>gi|361130396|gb|EHL02209.1| putative Transcription elongation factor S-II [Glarea lozoyensis
74030]
Length = 411
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
+Y+ L+ +SD + +V I A+ VE A YE N Y+ K R L N+
Sbjct: 149 IYNGLAFMSDASPTQV----------IAKAMEVEKAAYESHKGDNSDYRAKLRSLFQNLK 198
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
+ +N++ +VL G + P + M+ E+ S K + L+ + + V ++ K
Sbjct: 199 NKDNRELGIQVLSGDILPSKFVVMTHDELKSAKRIEEDKKLNYENM----KMAQVPMAEK 254
Query: 265 IIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
I SD CGRCG K+SY + D +T C C W
Sbjct: 255 SI-SDALRCGRCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRW 297
>gi|307180955|gb|EFN68743.1| Transcription elongation factor A protein 1 [Camponotus floridanus]
Length = 311
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 156 AADKVTIDLVKAC-DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRK 214
AA +V ++ +C P ++A +E A+Y ++ ++ YK + R + N+ D +N + R
Sbjct: 160 AALRVDGKVIDSCASPEELAEELEEAIYGEFKNTDNRYKNRVRSRIANLRDAKNPNLRMN 219
Query: 215 VLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECG 274
L+G + P + M+A+EMASD+I+ K+ A+ + V ++ +D+ +CG
Sbjct: 220 FLVGAITPARLAVMTAEEMASDEIKQLREQFKKE-AINDAQLATVQGTK----TDLLKCG 274
Query: 275 RCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+C +Y Q + D +T V C C W
Sbjct: 275 KCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 308
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
+E +Y++ ++ YK + R + N+ DP+N R+ VL G ++ I MSA+EMASD
Sbjct: 491 IEDHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGSIELRRIATMSAEEMASD 550
Query: 237 KI-QLWN---------HHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QH 285
++ QL N H + K G T D+ +CG+C +Y Q
Sbjct: 551 ELKQLRNVLTQEAIREHQMAKTGGTTT---------------DLLQCGKCKKKNCTYNQV 595
Query: 286 SSILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 596 QTRSADEPMTTFVLCNECGNRW 617
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E +Y++ ++ Y+
Sbjct: 224 GDSVRDKCVEMLSAALK------ADDDYKDYGINCD--KMASEIEDHIYQELKSTDMKYR 275
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 276 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AIRE 334
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 335 HQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 385
>gi|367043846|ref|XP_003652303.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
gi|346999565|gb|AEO65967.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 17/164 (10%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
LY+ L+ + E+ ++V +Q A+ VE+A + + + Y+ K R L+ ++
Sbjct: 143 LYNGLAYRATESIEEV----------LQRAMEVEAAAFAVY-KDTPEYRSKIRGLMTSLK 191
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
+N + R+VL G + PE + M+ E+AS+ + + L+++ L V +++K
Sbjct: 192 RKDNPELGRRVLGGEITPEKFVVMTDDELASEAQRARDRELERENMLKAQ----VPMAQK 247
Query: 265 IIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
I SD +C +C K+SY + D +T C C W
Sbjct: 248 SI-SDSLQCNKCKQKKVSYSQAQTRSADEPMTTFCECTVCGHRW 290
>gi|345324936|ref|XP_003430868.1| PREDICTED: transcription elongation factor A protein 3-like
[Ornithorhynchus anatinus]
Length = 281
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 26/147 (17%)
Query: 172 QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAK 231
Q+A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + I M+A+
Sbjct: 147 QLASEIEDHIYQELKSTDMKYRNRVRSRISNLRDPRNPALRRSVLCGGIAASRIARMTAE 206
Query: 232 EMASDKIQ----------LWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKI 281
EMASD+++ + H + K G T D+++C +C
Sbjct: 207 EMASDELKELRNAMTLEAIREHQMAKTGGTTT---------------DLFQCSKCKKKNC 251
Query: 282 SY-QHSSILDDYNLTRHVTCLNCNQYW 307
+Y Q + D +T V C C W
Sbjct: 252 TYNQVQTRSADEPMTTFVLCNECGNRW 278
>gi|431891151|gb|ELK02028.1| SPOC domain-containing protein 1 [Pteropus alecto]
Length = 1093
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 163 DLVKACDPIQ-VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVK 221
DLV + + ++ +A +E+A+++ +N YK KYR LLFN+ DP N D KV+ G +
Sbjct: 571 DLVLSEEVVESIAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDIT 630
Query: 222 PETIINMSAKEMASDKIQLWNHHLDKDG 249
P ++ MS+ ++A ++ W +K G
Sbjct: 631 PHGLVQMSSMQLAPQELARWRDQEEKRG 658
>gi|348510333|ref|XP_003442700.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Oreochromis niloticus]
Length = 2408
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 134 NDSFREIVREKLYDALSK-VSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
N+ R+ +R L D L K V D K+T V ++A +E M+ ++ Y
Sbjct: 734 NNQMRQNIRRSLTDILYKRVCDSDDLKMTESEVG-----RLAFAIEKEMFNLCLSTDSKY 788
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
K KYR L+FN+ DP+N+ +V+ G V P ++ +SA+E+ S +I W
Sbjct: 789 KNKYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLSKEISEW 837
>gi|115444961|ref|NP_001046260.1| Os02g0208600 [Oryza sativa Japonica Group]
gi|113535791|dbj|BAF08174.1| Os02g0208600, partial [Oryza sativa Japonica Group]
Length = 913
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 140 IVREKLYDALSKVSDEAADKVTID---LVKACDPIQVAILVESAMYEKWCRSNGMYKFKY 196
+V + L ++ SK A D+ ID +++ D +A+ VE +++ + N YK K
Sbjct: 313 VVADTLSESESKRMKSANDEEAIDKDSIIQKAD--DLAVRVEEELFKLFGGVNKKYKEKG 370
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
R LLFN+ D N + R +VL G + P+ + +M+A+E+AS ++ W
Sbjct: 371 RSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEELASKELSEW 415
>gi|367020002|ref|XP_003659286.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
gi|347006553|gb|AEO54041.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
Length = 309
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 127/301 (42%), Gaps = 38/301 (12%)
Query: 24 GVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
G++EE + + A + + S +LV +RH +P++ I +LA +++S WR
Sbjct: 27 GLLEELKSVPAPTEEQLRSTKAGVLVGR--LRH------NPNKDIARLASEIVSKWR--- 75
Query: 84 WDVEDVEYVAVTKKAKL----VENVKVEE----VTNGEERRHDSGNVPKKSISCMIKCND 135
+ V+ KK KL +E K+E+ + + P S S + +
Sbjct: 76 ---KSVDAAKEAKKRKLEQSKLEQSKLEQSKSPTSKSPTSKDSPAPAPSPSYSTPYEGDP 132
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC--------R 187
R + + +S+ ++A D L + + E + +
Sbjct: 133 EKRHFKTDNV--DISRTGNKARDGSIGVLYNGLAYRRTESIEEVLQHAMAIEAAAFAVYK 190
Query: 188 SNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
Y+ K R L+ ++ +N + R+VL G + P+ + M+ +E+ASD + + L++
Sbjct: 191 DTPEYRNKIRGLMTSLKRKDNAELGRRVLDGEIPPDKFVVMTDEELASDAQRERDRALER 250
Query: 248 DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQY 306
+ L V +++K I D+ +CG+CG K+SY + D +T C C
Sbjct: 251 ENMLKAQ----VPMAQKSISVDL-QCGKCGKKKVSYSQAQTRSADEPMTTFCECTVCGHR 305
Query: 307 W 307
W
Sbjct: 306 W 306
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
+Y++ ++ YK + R + N+ DP+N R+ VL G + I +MSA+EMASD+++
Sbjct: 299 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEEMASDELKQ 358
Query: 241 WNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVT 299
+ L ++ A+ + G + +D+ +CG+C +Y Q + D +T V
Sbjct: 359 LRNTLTQE-AIREHQMAKTGGT----TTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVL 413
Query: 300 CLNCNQYW 307
C C W
Sbjct: 414 CNECGNRW 421
>gi|390339426|ref|XP_780718.3| PREDICTED: uncharacterized protein LOC575208 [Strongylocentrotus
purpuratus]
Length = 2433
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 132 KCNDSFREIVREKLYDALSKVSDEAAD--KVTIDLVKACDPIQVAILVESAMYEKWCRSN 189
+ ++S R V+ L D L +A D VT D VK +V+ VE +Y+ + +
Sbjct: 1261 QASESVRVNVKRTLLDVLLTRVKKAPDVKNVTADDVK-----RVSKQVEFELYKLFNDTG 1315
Query: 190 GMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHH 244
YK KYR L+FNI D +N+ R +L G + P ++ MS+ ++AS ++ W H
Sbjct: 1316 AKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQELMKWREQEAKHE 1375
Query: 245 LD 246
LD
Sbjct: 1376 LD 1377
>gi|344254454|gb|EGW10558.1| Transcription elongation factor A protein 2 [Cricetulus griseus]
Length = 255
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 123 PKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMY 182
P I+C D+ R RE L AL D A V +D C+ ++ +E ++
Sbjct: 85 PSVPITC-----DAVRNKCREMLTLALQTDHDHKA--VGVD----CE--HLSAQIEECIF 131
Query: 183 EKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWN 242
++ YK + R + N+ D +N RR VL G + P+ I M+++EMASD+++
Sbjct: 132 LDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIR 191
Query: 243 HHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCL 301
+ K+ A+ + G ++ +D++ C +C +Y Q + D +T +V C
Sbjct: 192 KAMTKE-AIREHQMARTGGTQ----TDLFTCSKCKKKNCTYTQVQTRSSDEPMTTYVVCN 246
Query: 302 NCNQYW 307
C W
Sbjct: 247 ECGNRW 252
>gi|440896934|gb|ELR48725.1| SPOC domain-containing protein 1, partial [Bos grunniens mutus]
Length = 1171
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E+A++ +NG YK KYR LLFN+ DP N + KV+ G + P ++ MS+ +
Sbjct: 581 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 640
Query: 233 MASDKIQLWNHHLDKDG 249
+A ++ W +K G
Sbjct: 641 LAPQELARWRDQEEKRG 657
>gi|194664368|ref|XP_588581.4| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|297472143|ref|XP_002685704.1| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|296490254|tpg|DAA32367.1| TPA: SPOC domain containing 1-like [Bos taurus]
Length = 1249
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E+A++ +NG YK KYR LLFN+ DP N + KV+ G + P ++ MS+ +
Sbjct: 659 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 718
Query: 233 MASDKIQLWNHHLDKDG 249
+A ++ W +K G
Sbjct: 719 LAPQELARWRDQEEKRG 735
>gi|326931937|ref|XP_003212080.1| PREDICTED: death-inducer obliterator 1-like [Meleagris gallopavo]
Length = 2496
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 115 RRHDSGNVPKKSISCMIKC---------NDSFREIVREKLYDALSKVSDEAADKVTIDLV 165
+R +VP S S +K N R+ +R L + L K +++ D V +
Sbjct: 819 KRPAPSSVPTASGSSQVKVSAVPIQSQPNSQIRQNIRRSLKEILWKRVNDSDDLVMTE-- 876
Query: 166 KACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETI 225
+ +VA+ +E M+ + ++ YK KYR ++FN+ DP+NQ +VL G + +
Sbjct: 877 --SEVGKVALNIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLHGEISLSKL 934
Query: 226 INMSAKEMASDKIQLW 241
+ M +E+ S ++ +W
Sbjct: 935 VRMKPEELLSKELSVW 950
>gi|363741478|ref|XP_001234737.2| PREDICTED: death-inducer obliterator 1 [Gallus gallus]
Length = 2152
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
Query: 115 RRHDSGNVPKKSISCMIKC---------NDSFREIVREKLYDALSKVSDEAADKVTIDLV 165
+R +VP S S +K N R+ +R L + L K +++ D V +
Sbjct: 732 KRPAPSSVPTASGSSQVKVSAIPIQSQPNSQIRQNIRRSLKEILWKRVNDSDDLVMTE-- 789
Query: 166 KACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETI 225
+ +VA+ +E M+ + ++ YK KYR ++FN+ DP+NQ +VL G + +
Sbjct: 790 --SEVGKVALNIEKEMFNLFHVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLHGEISLSKL 847
Query: 226 INMSAKEMASDKIQLW 241
+ M +E+ S ++ +W
Sbjct: 848 VRMKPEELLSKELSVW 863
>gi|3347836|gb|AAC64680.1| transcription elongation factor S-II [Xenopus laevis]
Length = 121
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y+ + R + N+ DP+N + R+ VL G V P++I M+A+EMASD+++ + + ++ A+
Sbjct: 7 YRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQE-AI 65
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D+ +C +C SY Q + D +T V C C W
Sbjct: 66 REHQMAKTGGTQ----TDLLQCEKCKKKNCSYNQVQTRSADEPMTTFVLCNECGNRW 118
>gi|3347834|gb|AAC64679.1| transcription elongation factor S-II [Xenopus laevis]
Length = 289
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 172 QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAK 231
++A +E +Y + ++ Y+ + R + N+ DP+N + R+ VL G V P++I M+A+
Sbjct: 155 RLAWEIEECIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAE 214
Query: 232 EMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILD 290
EMASD+++ + + ++ A+ + G ++ +D+ +C +C SY Q +
Sbjct: 215 EMASDELRELRNTMTQE-AIREHQMAKTGGTQ----TDLLQCEKCKKKNCSYNQVQTRSA 269
Query: 291 DYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 270 DEPMTTFVLCNECGNRW 286
>gi|395329637|gb|EJF62023.1| transcription elongation factor [Dichomitus squalens LYAD-421 SS1]
Length = 300
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
D R+ E +YDAL V D A I L +A D I+ +L ++ +N YK
Sbjct: 138 GDKTRDKCAELIYDAL--VFDSGAPSELI-LSRAKD-IEKTVLADNGG------ANANYK 187
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
K R L N+ D N R V+ G + + MS+ +MAS++ + + + ++ T
Sbjct: 188 AKIRSLFVNLKDKNNPGLRECVISGELPVSKLCKMSSADMASEERKAADAKIKEENLFKT 247
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+G + +D ++C RC K Y Q + D +T VTC C W
Sbjct: 248 -----LGAGEQEAETDAFQCPRCKQRKCRYRQQQTRSADEPMTTFVTCTVCKNRW 297
>gi|194742650|ref|XP_001953814.1| GF17954 [Drosophila ananassae]
gi|190626851|gb|EDV42375.1| GF17954 [Drosophila ananassae]
Length = 1976
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Query: 138 REIVREKLYDALSKVSDE---AADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YK 193
R ++E+L + + DE ++ T + A + VES MY + R G YK
Sbjct: 1258 RRSLKEQLLARIKEAQDEEKASSQDATTQWLTAAEVDHFVKAVESEMYHSFGRDVGAKYK 1317
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHHLD 246
KYR L+FNI D +N+ K+ V+P+ ++ M+A+++AS ++ W H LD
Sbjct: 1318 AKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTAEQLASQELAKWREEENRHQLD 1375
>gi|303321710|ref|XP_003070849.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110546|gb|EER28704.1| transcription elongation factor S-II family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320040335|gb|EFW22268.1| transcription elongation factor S-II [Coccidioides posadasii str.
Silveira]
gi|392862246|gb|EAS37125.2| transcription elongation factor S-II [Coccidioides immitis RS]
Length = 303
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 23/168 (13%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNI 203
LYD L S E+ V +Q +I VE+A Y + + Y+ K R L N+
Sbjct: 152 LYDGLCLNSTESPRTV----------LQKSIEVEAAAYSVFGPETKEQYRTKIRSLYQNL 201
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVG 260
+ N R +VL + P+ + M+ E+ SD+ + + ++K D A+V
Sbjct: 202 RNKSNPALRVRVLSNEIAPDKFVRMTHDELKSDERREEDRKIEKENMDKAMV------AK 255
Query: 261 LSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
R I S +CG+CG K++Y + D +T TCL C + W
Sbjct: 256 AERSI--SKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSW 301
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 45/261 (17%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPS-QKIQKLAYDLISSWRDMCWDVEDVE 90
+D L ++K IT LL ST+V + + K S +++ LA LI SW+
Sbjct: 27 MDLLRELKAMPITLHLLQSTRVGMSVNALRKQSSDEEVIGLAKSLIKSWK---------- 76
Query: 91 YVAVTKKAKLVENVKVEEVTNGEERRHDSGN---VPKKSISCMIKCNDSFREIVREKLYD 147
K+ +V+N + R D G +P S + D R+ +
Sbjct: 77 --------------KLLDVSNAKTR--DPGRDTPLPTSSTKNASEAMDHSRKRLDLPRMS 120
Query: 148 ALSKVSDEAADKVTIDLVK-ACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDP 206
+ +++ +T D V+ C + L M YK + R + N+ D
Sbjct: 121 STPRITTFPPVPITCDAVRNKCREMLTTALQTDHMK---------YKNRVRSRISNLKDA 171
Query: 207 ENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKII 266
+N + RR VL G + P+ I M+++EMASD+++ + K+ A+ + G ++
Sbjct: 172 KNPELRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE-AIREHQMARTGGTQ--- 227
Query: 267 VSDIYECGRCGHNKISYQHSS 287
+D++ CG+C +Y +S
Sbjct: 228 -TDLFTCGKCRKKNCTYTQAS 247
>gi|403293239|ref|XP_003937628.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Saimiri boliviensis boliviensis]
Length = 1200
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 118 DSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILV 177
DS + ++ S I + ++E L+ L ++ D + ++ +A +
Sbjct: 590 DSAQLQQEKPSLYIGVRGTVFRSMQEVLWTRLRELPDLVLSEEVVE--------GIAAGI 641
Query: 178 ESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDK 237
E+A+++ ++G YK KYR LLFN+ DP N D +V+ G V P ++ MS+ ++A +
Sbjct: 642 EAALWDLTQGTDGRYKAKYRSLLFNLRDPRNLDLFLRVVHGDVNPYDLVRMSSMQLAPQE 701
Query: 238 IQLWNHHLDKDG 249
+ W +K G
Sbjct: 702 LARWRDQEEKRG 713
>gi|317142778|ref|XP_001819087.2| PHD finger domain protein [Aspergillus oryzae RIB40]
Length = 896
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+A+ +E+AMYE +C +G YK + R +LFN+ +N R ++L+G + P+T+
Sbjct: 350 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 407
Query: 228 MSAKEMASDKIQLWNHHLDKDG 249
MS+++MAS+++Q + + ++
Sbjct: 408 MSSQDMASEELQQKDAEIKREA 429
>gi|195030242|ref|XP_001987977.1| GH10818 [Drosophila grimshawi]
gi|193903977|gb|EDW02844.1| GH10818 [Drosophila grimshawi]
Length = 350
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+P ++A +E A+Y ++ ++ YK + R + N+ DP+N R + G V + + M
Sbjct: 213 EPEEMAAELEDAIYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKM 272
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ +EMASD+++ K+ A+ + V ++ +D+ +CG+C +Y Q +
Sbjct: 273 TPEEMASDEMKKLREKFVKE-AINDAQLATVQGTK----TDLLKCGKCKKRNCTYNQLQT 327
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 328 RSADEPMTTFVMCNECGNRW 347
>gi|358058917|dbj|GAA95315.1| hypothetical protein E5Q_01972 [Mixia osmundae IAM 14324]
Length = 330
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 138 REIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW-CRSNGMYKFKY 196
R+ V + YDAL+ S AD + ++ VE A+Y+ + ++G Y+ K
Sbjct: 169 RDNVVKLFYDALASDSAAPADMIATRVMD----------VEEAVYKFYEGDTSGDYRQKT 218
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI 256
R LL N D +N R V+ G + + +M A + +S++ + + L +
Sbjct: 219 RSLLLNFKDKKNPALREAVVSGELSASKLASMKASDFSSEERKAEDRKLAEQNMFAAQSA 278
Query: 257 FPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
P K +D ++CG+CG + + YQ + D +T V C+ CN W
Sbjct: 279 APAAGQAK---TDAFKCGKCGKRECTYYQMQTRSADEPMTTFVCCIVCNNRW 327
>gi|301620068|ref|XP_002939405.1| PREDICTED: transcription elongation factor A protein 3-like
[Xenopus (Silurana) tropicalis]
Length = 453
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 172 QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAK 231
++A +E +Y ++ Y+ + R + N+ DP+N + R+ VL G V P+ I M+A+
Sbjct: 319 RLAWEIEECIYRDIKATDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQNIATMTAE 378
Query: 232 EMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILD 290
EMASD+++ + + ++ A+ + G + +D+ +C +C +Y Q +
Sbjct: 379 EMASDELRELRNTMTQE-AIREHQMAKTGGT----TTDLLQCEKCKKKNCTYNQVQTRSA 433
Query: 291 DYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 434 DEPMTTFVLCNECGNRW 450
>gi|49387896|dbj|BAD24999.1| PHD finger protein-like [Oryza sativa Japonica Group]
gi|49387908|dbj|BAD25008.1| PHD finger protein-like [Oryza sativa Japonica Group]
Length = 1119
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 140 IVREKLYDALSKVSDEAADKVTID---LVKACDPIQVAILVESAMYEKWCRSNGMYKFKY 196
+V + L ++ SK A D+ ID +++ D +A+ VE +++ + N YK K
Sbjct: 313 VVADTLSESESKRMKSANDEEAIDKDSIIQKAD--DLAVRVEEELFKLFGGVNKKYKEKG 370
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
R LLFN+ D N + R +VL G + P+ + +M+A+E+AS ++ W
Sbjct: 371 RSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEELASKELSEW 415
>gi|301777208|ref|XP_002924013.1| PREDICTED: SPOC domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 1182
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 163 DLVKACDPIQ-VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVK 221
DLV + + ++ +A +E+A+++ ++ YK KYR LLFN+ DP N D KV+ G V
Sbjct: 582 DLVLSEEAVEGIAAGIETALFDLTQATSCRYKTKYRSLLFNLRDPRNPDLFLKVVQGDVT 641
Query: 222 PETIINMSAKEMASDKIQLWNHHLDKDG 249
P ++ MS ++A ++ W +K G
Sbjct: 642 PHDLVRMSTAQLAPQELARWRDQEEKRG 669
>gi|307105461|gb|EFN53710.1| hypothetical protein CHLNCDRAFT_53651 [Chlorella variabilis]
Length = 1283
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
+ R+ VR + AL V+ EAA + + +P A VE+A+++ + + YK
Sbjct: 365 EELRQKVRGGIQQALELVATEAAGEAG----RLPEPAPTAEAVEAALFKLYGGTTKDYKQ 420
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
K+R L FN+ D N D R VL G + P+ + M+A E+A+ ++
Sbjct: 421 KFRTLQFNLKDAHNPDLRAHVLRGDIAPDAFVRMTATELANKEL 464
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ DP N RR VL G + I
Sbjct: 356 CD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGTISAGLIAK 413
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+++C +C +Y Q
Sbjct: 414 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQ 468
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 469 TRSADEPMTTFVLCNECGNRW 489
>gi|391863799|gb|EIT73098.1| putative transcription factor [Aspergillus oryzae 3.042]
Length = 903
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+A+ +E+AMYE +C +G YK + R +LFN+ +N R ++L+G + P+T+
Sbjct: 357 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 414
Query: 228 MSAKEMASDKIQLWNHHLDKDG 249
MS+++MAS+++Q + + ++
Sbjct: 415 MSSQDMASEELQQKDAEIKREA 436
>gi|213625366|gb|AAI70443.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
+E +Y + ++ Y+ + R + N+ DP+N + R+ VL G V P++I M+A+EMASD
Sbjct: 516 IEECIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASD 575
Query: 237 KIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLT 295
+++ + + ++ A+ + G ++ +D+ +C +C SY Q + D +T
Sbjct: 576 ELRELRNTMTQE-AIREHQMAKTGGTQ----TDLLQCEKCKKKNCSYNQVQTRSADEPMT 630
Query: 296 RHVTCLNCNQYW 307
V C C W
Sbjct: 631 TFVLCNECGNRW 642
>gi|147904545|ref|NP_001090166.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|10801727|dbj|BAB16755.1| transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
+E +Y + ++ Y+ + R + N+ DP+N + R+ VL G V P++I M+A+EMASD
Sbjct: 516 IEECIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASD 575
Query: 237 KIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLT 295
+++ + + ++ A+ + G ++ +D+ +C +C SY Q + D +T
Sbjct: 576 ELRELRNTMTQE-AIREHQMAKTGGTQ----TDLLQCEKCKKKNCSYNQVQTRSADEPMT 630
Query: 296 RHVTCLNCNQYW 307
V C C W
Sbjct: 631 TFVLCNECGNRW 642
>gi|238501684|ref|XP_002382076.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
gi|220692313|gb|EED48660.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
Length = 924
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+A+ +E+AMYE +C +G YK + R +LFN+ +N R ++L+G + P+T+
Sbjct: 378 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 435
Query: 228 MSAKEMASDKIQLWNHHLDKDG 249
MS+++MAS+++Q + + ++
Sbjct: 436 MSSQDMASEELQQKDAEIKREA 457
>gi|222622404|gb|EEE56536.1| hypothetical protein OsJ_05842 [Oryza sativa Japonica Group]
Length = 614
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 154 DEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRR 213
+EA DK +I + KA D +A+ VE +++ + N YK K R LLFN+ D N + R
Sbjct: 7 EEAIDKDSI-IQKADD---LAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRE 62
Query: 214 KVLLGHVKPETIINMSAKEMASDKIQLW 241
+VL G + P+ + +M+A+E+AS ++ W
Sbjct: 63 RVLSGDITPDRLCSMTAEELASKELSEW 90
>gi|213623950|gb|AAI70441.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
+E +Y + ++ Y+ + R + N+ DP+N + R+ VL G V P++I M+A+EMASD
Sbjct: 516 IEECIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASD 575
Query: 237 KIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLT 295
+++ + + ++ A+ + G ++ +D+ +C +C SY Q + D +T
Sbjct: 576 ELRELRNTMTQE-AIREHQMAKTGGTQ----TDLLQCEKCKKKNCSYNQVQTRSADEPMT 630
Query: 296 RHVTCLNCNQYW 307
V C C W
Sbjct: 631 TFVLCNECGNRW 642
>gi|383847731|ref|XP_003699506.1| PREDICTED: transcription elongation factor S-II-like isoform 1
[Megachile rotundata]
Length = 312
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 156 AADKVTIDLVKAC-DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRK 214
AA +V + ++ C P ++A +E A+Y ++ ++ YK + R + N+ D +N + R
Sbjct: 161 AALRVDGNTIEGCASPEELAEELEEAIYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTN 220
Query: 215 VLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECG 274
+ G + P + M+A+EMASD+I+ K+ A+ + V ++ +D+ +CG
Sbjct: 221 FIAGAITPARLAVMTAEEMASDEIKQLREQFKKE-AINDAQLATVQGTK----TDLLKCG 275
Query: 275 RCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+C +Y Q + D +T V C C W
Sbjct: 276 KCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 309
>gi|119195887|ref|XP_001248547.1| hypothetical protein CIMG_02318 [Coccidioides immitis RS]
Length = 324
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 23/168 (13%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNI 203
LYD L S E+ V +Q +I VE+A Y + + Y+ K R L N+
Sbjct: 152 LYDGLCLNSTESPRTV----------LQKSIEVEAAAYSVFGPETKEQYRTKIRSLYQNL 201
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVG 260
+ N R +VL + P+ + M+ E+ SD+ + + ++K D A+V
Sbjct: 202 RNKSNPALRVRVLSNEIAPDKFVRMTHDELKSDERREEDRKIEKENMDKAMV------AK 255
Query: 261 LSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
R I S +CG+CG K++Y + D +T TCL C + W
Sbjct: 256 AERSI--SKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSW 301
>gi|195453902|ref|XP_002073994.1| GK14401 [Drosophila willistoni]
gi|194170079|gb|EDW84980.1| GK14401 [Drosophila willistoni]
Length = 2012
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Query: 138 REIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YKFKY 196
R ++E+L + + + DK I + + + Q A VES MY + R G YK KY
Sbjct: 1290 RRTLKEQLLARIKEAQEANKDK-AIKWLTSLEVEQFAKSVESEMYHSFGRDAGAKYKSKY 1348
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHHLD 246
R L+FNI D +N+ K+ V+P+ ++ M+ +++AS ++ W H LD
Sbjct: 1349 RSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPEQLASQELAKWREEENRHQLD 1403
>gi|432094021|gb|ELK25813.1| Transcription elongation factor A protein 2 [Myotis davidii]
Length = 131
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK + R + N+ D +N D RR VL G + P+ I M+++EMASD+++ + K+ A+
Sbjct: 16 YKNRVRSRIANLKDAKNPDLRRNVLCGTITPQQIAVMTSEEMASDELKEIRKAMTKE-AI 74
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ C +C +Y Q + D +T V C C W
Sbjct: 75 REHQMARTGGTQ----TDLFTCSKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 127
>gi|383847733|ref|XP_003699507.1| PREDICTED: transcription elongation factor S-II-like isoform 2
[Megachile rotundata]
Length = 311
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 156 AADKVTIDLVKAC-DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRK 214
AA +V + ++ C P ++A +E A+Y ++ ++ YK + R + N+ D +N + R
Sbjct: 160 AALRVDGNTIEGCASPEELAEELEEAIYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTN 219
Query: 215 VLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECG 274
+ G + P + M+A+EMASD+I+ K+ A+ + V ++ +D+ +CG
Sbjct: 220 FIAGAITPARLAVMTAEEMASDEIKQLREQFKKE-AINDAQLATVQGTK----TDLLKCG 274
Query: 275 RCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+C +Y Q + D +T V C C W
Sbjct: 275 KCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 308
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK + R + N+ D +N R KVL G V E + M+A+EMAS +++ L K+ A+
Sbjct: 387 YKTRVRSRIANLKDAKNPGLREKVLHGDVSAEKMAKMTAEEMASPEMKELRQSLTKE-AI 445
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYWVST 310
+ G ++ +D+ +CG+C ++Y Q + D +T C C W +T
Sbjct: 446 RDAQMATTGGTQ----TDLLKCGKCKKRNVTYNQVQTRSADEPMTTFCYCNECGNRWKAT 501
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK + R + N+ D +N R KVL G V E + M+A+EMAS +++ L K+ A+
Sbjct: 138 YKTRVRSRIANLKDAKNPGLREKVLHGDVSAEKMAKMTAEEMASPEMKELRQSLTKE-AI 196
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYWVST 310
+ G ++ +D+ +CG+C ++Y Q + D +T C C W
Sbjct: 197 RDAQMATTGGTQ----TDLLKCGKCKKRNVTYNQVQTRSADEPMTTFCYCNECGNRWKEN 252
Query: 311 NL----SFGVLPI 319
L S LP+
Sbjct: 253 ALDILKSLKELPM 265
>gi|83766945|dbj|BAE57085.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 761
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 53/82 (64%), Gaps = 6/82 (7%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+A+ +E+AMYE +C +G YK + R +LFN+ +N R ++L+G + P+T+
Sbjct: 291 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 348
Query: 228 MSAKEMASDKIQLWNHHLDKDG 249
MS+++MAS+++Q + + ++
Sbjct: 349 MSSQDMASEELQQKDAEIKREA 370
>gi|440907449|gb|ELR57597.1| Death-inducer obliterator 1 [Bos grunniens mutus]
Length = 2175
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+L+E M+ + ++ YK
Sbjct: 669 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALLIEKEMFNLFRVTDNRYK 724
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
KYR L+FN+ DP+NQ +VL + ++ M +E+ S ++ +W K
Sbjct: 725 SKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWRERTTK 778
>gi|426241849|ref|XP_004023383.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Ovis aries]
Length = 1927
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+L+E M+ + ++ YK
Sbjct: 617 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALLIEKEMFNLFRVTDNRYK 672
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
KYR L+FN+ DP+NQ +VL + ++ M +E+ S ++ +W K
Sbjct: 673 SKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWRERTTK 726
>gi|358415060|ref|XP_003582994.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Bos taurus]
Length = 2196
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+L+E M+ + ++ YK
Sbjct: 669 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALLIEKEMFNLFRVTDNRYK 724
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
KYR L+FN+ DP+NQ +VL + ++ M +E+ S ++ +W K
Sbjct: 725 SKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWRERTTK 778
>gi|359071808|ref|XP_003586878.1| PREDICTED: death-inducer obliterator 1 [Bos taurus]
Length = 2196
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+L+E M+ + ++ YK
Sbjct: 669 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALLIEKEMFNLFRVTDNRYK 724
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
KYR L+FN+ DP+NQ +VL + ++ M +E+ S ++ +W K
Sbjct: 725 SKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWRERTTK 778
>gi|301619923|ref|XP_002939342.1| PREDICTED: hypothetical protein LOC100497807 [Xenopus (Silurana)
tropicalis]
Length = 392
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
++ R + L D L K EA D +D V+ + A +E ++ + ++ YK
Sbjct: 227 ENVRTTTVQALSDVLLKRVKEAPD---LD-VQEETLLNAAKNIEQEIFALFYHTDARYKK 282
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR +LFN+ DP N+ R+++LG + P+ + ++S+ EMA D++ W
Sbjct: 283 KYRSILFNLKDPNNKVLFRRLVLGEITPQHLASLSSTEMAGDELTNW 329
>gi|239781978|pdb|3GTM|S Chain S, Co-Complex Of Backtracked Rna Polymerase Ii With Tfiis
Length = 173
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 18/174 (10%)
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSN-GMYKF 194
R+ V + LYD L+K S+ + + A +ES M + C +N YK
Sbjct: 12 LRDQVLKALYDVLAKESEHPPQSI----------LHTAKAIESEMNKVNNCDTNEAAYKA 61
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+YR + N+ N D + K+ G + PE + AK++A ++ + K L
Sbjct: 62 RYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQN-LYNA 120
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
G + + V+D + CG+C K+S YQ + D+ LT TC C W
Sbjct: 121 Q----GATIERSVTDRFTCGKCKEKKVSYYQLQTRSADHPLTTFCTCEACGNRW 170
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y++ ++ Y+ + R + N+ D +N RR VL G + E I
Sbjct: 207 CD--KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDSKNPGLRRNVLSGAISTELIAK 264
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSS 287
M A+EMASD+++ + + ++ G + +D+ +CG+C +Y
Sbjct: 265 MMAEEMASDELRELRNAMTQEAIREHQMAKTSGTN-----TDLLQCGKCKKKNCTYNQVQ 319
Query: 288 ILD-DYNLTRHVTCLNCNQYW 307
L D +T V C C W
Sbjct: 320 TLSADEPMTTFVLCNECGHRW 340
>gi|242017625|ref|XP_002429288.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
gi|212514184|gb|EEB16550.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
Length = 289
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ-KIQKLAYDLISSWRDMCWD 85
EE + +D L +++N +T ++L T++ + + K S ++ L+ LI +W+ +
Sbjct: 5 EEDQALDLLKELQNLPVTLEILTKTRIGMTVNELRKSSSDDEVISLSKTLIKNWKKFLSN 64
Query: 86 VEDVE---------------YVAVTKKAKLVENVKVE-EVTNGEERRHDSGNVPKKSISC 129
+K+K VE+ E + T ++R+ + P + +
Sbjct: 65 SSATSNNKDNNTNNTTATAANTPKLEKSKPVEDKSEEPKPTKKDDRKRHQTSFPPSNTA- 123
Query: 130 MIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKAC-DPIQVAILVESAMYEKWCRS 188
DS R RE L A+ ++ D V C P +A +E A++ ++ +
Sbjct: 124 -----DSVRIKCRELLAAAIKGNTES-------DQVDGCGSPEDLAEELEEAIFNEFRNT 171
Query: 189 NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKD 248
+ YK + R + N+ DP+N + R L+G + + M+A+E+ASD+++ K+
Sbjct: 172 DIKYKNRIRSRVANLKDPKNPNLRMNYLIGALPASRLAVMTAEELASDEMKQIRDKFKKE 231
Query: 249 GALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
A+ + V ++ +D+ +CG+C +Y Q + D +T V C C W
Sbjct: 232 -AINDAQLATVQGTK----TDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 286
>gi|410080934|ref|XP_003958047.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
gi|372464634|emb|CCF58912.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
Length = 323
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW--CRSNGMY 192
+ R+ V LYDAL+K S + + ++++I +E+ M + + + Y
Sbjct: 160 NKLRDSVIRALYDALAKESQHPPNSI----------LKLSIEIEAEMNKSYDSIANEKQY 209
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
K KYR + N+ N D + K+ G + P ++N KE+A + ++ K +
Sbjct: 210 KEKYRIIYSNLISKNNSDLKFKITNGDITPVHLVNCDPKELAPEPLR------KKIEEIR 263
Query: 253 TGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
++F G + + V+D + CG+C K+S YQ + D LT TC C W
Sbjct: 264 EKNLFNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRW 320
>gi|195355349|ref|XP_002044154.1| GM22558 [Drosophila sechellia]
gi|194129443|gb|EDW51486.1| GM22558 [Drosophila sechellia]
Length = 162
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP A +E A+Y + YK + R L N+ DP+N R K L+G + P+ + M
Sbjct: 28 DPHDKAAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQELSRM 87
Query: 229 SAKEMASDKIQLWNHHLDKDG--ALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHS 286
+ +EMASD ++ +D A G++ + +++++C RC + H
Sbjct: 88 TPEEMASDDLKQMRQQYVQDSINAAQLGNV-------EGTKTNLFKCERCQKRNCTQLH- 139
Query: 287 SILD-DYNLTRHVTCLNCNQYWVS 309
I D D L V C +C W S
Sbjct: 140 -IRDGDEPLITFVMCDDCGNRWKS 162
>gi|348507274|ref|XP_003441181.1| PREDICTED: hypothetical protein LOC100699272 [Oreochromis
niloticus]
Length = 1691
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 17/143 (11%)
Query: 109 VTNGEERRHDSGNVP-KKSISCMI---KCNDSFREIVREKLYDALSKVSDEAADKVTIDL 164
V+ +E +H + ++ KK +S DS +EI+ ++L D+ +S E A
Sbjct: 668 VSMKQESKHKAPSLASKKPVSLEAIRRSVRDSLKEILIQRLKDSDLNISVERAS------ 721
Query: 165 VKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPET 224
++A +E ++ + ++ YK KYR L+FN+ D +N ++VL G + P
Sbjct: 722 -------ELAKKIERELFHLYKDTDNKYKNKYRSLMFNLKDTKNNILCKRVLKGEISPAN 774
Query: 225 IINMSAKEMASDKIQLWNHHLDK 247
+I MS +E+AS ++ W ++
Sbjct: 775 LIRMSPEELASKELAAWRQRENR 797
>gi|321260424|ref|XP_003194932.1| positive transcription elongation factor [Cryptococcus gattii
WM276]
gi|317461404|gb|ADV23145.1| positive transcription elongation factor, putative [Cryptococcus
gattii WM276]
Length = 333
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 119/283 (42%), Gaps = 53/283 (18%)
Query: 44 TYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLVEN 103
T LL S++ + + H + + LA +++ WRD + + A + K V+
Sbjct: 39 TEDLLRSSKAGVAIGKLRTHTTPSVSNLAKEIVKKWRDAVEESKKKRKRAEGDEGKDVK- 97
Query: 104 VKVEEVTNGEERRHDSGNV----------PKKSISCMIKCND----------------SF 137
K +E NG+ + +S +V P S + D S
Sbjct: 98 -KEKEEGNGKRVKAESIHVYFAAGSSAVTPSASTPASVSTPDVKATSPPARQPLSTIDSS 156
Query: 138 REIVREKLYDALS-KVSDEAADKVTIDLVK-----------ACDPI-QVAILVESAMYEK 184
R R D ++ + ++++ ++D V+ A D + AI +E A +
Sbjct: 157 RTTPRTAKSDGMTDSLKADSSEGGSVDSVRDKCVVMIYDALALDSTAERAIGIERAANKS 216
Query: 185 WCRSNGM-YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNH 243
S G Y+ K R L N+ D N R +++LG++ E + +MS EMAS+ +++
Sbjct: 217 MNFSTGNDYRAKMRSLFLNLKDKGNPALRNEIVLGYISTEKVASMSKDEMASESVRMLKE 276
Query: 244 HLDKDGALVTGHIF---PVGLSRKIIVSDIYECGRCGHNKISY 283
+ D ++F VG+++ +D ++CGRC K +Y
Sbjct: 277 KIASD------NLFKAKAVGVTQ--AETDAFKCGRCHQRKCTY 311
>gi|302927325|ref|XP_003054473.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735414|gb|EEU48760.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 303
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
D I A+ VE A Y + YK K R L N+ + N+D R+V+ G + + + M
Sbjct: 166 DVIAKAVSVEHAAYTRNKGETPEYKKKIRSLFTNLKNKSNKDLGRRVMSGDISADRFVVM 225
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ E+ S+ + L+K+ V ++ K I D+ +CGRC ++SY Q +
Sbjct: 226 TDDELKSEDQRKKEVELEKENM----KKAQVPMAEKSISEDL-QCGRCKKKQVSYTQAQT 280
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T C+ C W
Sbjct: 281 RAADEPMTTFCECMACGHRW 300
>gi|218190291|gb|EEC72718.1| hypothetical protein OsI_06323 [Oryza sativa Indica Group]
Length = 907
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 154 DEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRR 213
+EA DK +I + KA D +A+ +E +++ + N YK K R LLFN+ D N + R
Sbjct: 7 EEAIDKDSI-IQKADD---LAVRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRE 62
Query: 214 KVLLGHVKPETIINMSAKEMASDKIQLW 241
+VL G + P+ + +M+A+E+AS ++ W
Sbjct: 63 RVLSGDITPDRLCSMTAEELASKELSEW 90
>gi|115709498|ref|XP_797149.2| PREDICTED: uncharacterized protein LOC592539, partial
[Strongylocentrotus purpuratus]
Length = 403
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 132 KCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM 191
+ ++S R V+ L D L +A D + V A D +V+ VE +Y+ + +
Sbjct: 290 QASESVRVNVKRTLLDVLLTRVKKAPD---VKNVTADDVKRVSKQVEFELYKLFNDTGAK 346
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YK KYR L+FNI D +N+ R +L G + P ++ MS+ ++AS ++ W
Sbjct: 347 YKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQELMKW 396
>gi|400603045|gb|EJP70643.1| transcription elongation factor S-II [Beauveria bassiana ARSEF
2860]
Length = 309
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
D + ++ VE+A + + YK K R L N+ + N+ + V+ + PE + M
Sbjct: 172 DVLAKSVAVEAAAFAHFKGQGADYKKKIRSLFTNLKNKSNRALGQSVMASEIPPERFVAM 231
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ ++ SD + L+K+ V ++ K I SD ECG+C ++SY Q +
Sbjct: 232 TDDDLKSDDQRKKEIELEKENM----KKAQVPMAEKSI-SDSLECGKCKKKQVSYTQAQT 286
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T C+NC W
Sbjct: 287 RSADEPMTTFCECMNCGNRW 306
>gi|17136888|ref|NP_476967.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|442627872|ref|NP_001260457.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
gi|135660|sp|P20232.1|TFS2_DROME RecName: Full=Transcription elongation factor S-II; AltName:
Full=RNA polymerase II elongation factor DMS-II;
AltName: Full=TFIIS
gi|7921|emb|CAA37710.1| unnamed protein product [Drosophila melanogaster]
gi|6713129|gb|AAA92864.2| transcription elongation factor [Drosophila melanogaster]
gi|7298202|gb|AAF53436.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|15291997|gb|AAK93267.1| LD34766p [Drosophila melanogaster]
gi|220942248|gb|ACL83667.1| TfIIS-PA [synthetic construct]
gi|440213800|gb|AGB92992.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
Length = 313
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+P ++A +E A+Y ++ ++ YK + R + N+ DP+N R + G V + + M
Sbjct: 176 EPEEMAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKM 235
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ +EMASD+++ K+ A+ + V ++ +D+ +C +C +Y Q +
Sbjct: 236 TPEEMASDEMKKLREKFVKE-AINDAQLATVQGTK----TDLLKCAKCKKRNCTYNQLQT 290
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 291 RSADEPMTTFVMCNECGNRW 310
>gi|209876019|ref|XP_002139452.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
gi|209555058|gb|EEA05103.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
Length = 322
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 160 VTIDLVKACDPIQV---AILVESAMYEKWCRSNGM----YKFKYRCLLFNISDPENQDFR 212
V + + DP QV + VESA+Y+++ G Y + + + +N+ D +N +
Sbjct: 167 VPVSQAELMDPSQVCEISAEVESALYKEYIIKQGNSVRDYNLQLKTIKWNLGDLKNPELN 226
Query: 213 RKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSD-IY 271
K+ +G + P+ I M ++EMAS+ Q ++ + + R ++ + +
Sbjct: 227 SKLYIGKITPDEIATMHSREMASEAKQKEREKHKQESLEACQSDWDL---RNLVQKEGQF 283
Query: 272 ECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
CG+C NK +Y Q + D +T V CLNC W
Sbjct: 284 TCGKCRTNKTTYFQMQTRSADEPMTTFVRCLNCGNRW 320
>gi|195478903|ref|XP_002100690.1| GE17201 [Drosophila yakuba]
gi|194188214|gb|EDX01798.1| GE17201 [Drosophila yakuba]
Length = 162
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 163 DLVKAC-DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVK 221
DL + C DP +A +E A+Y + YK + R L N+ DP+N R K LLG +
Sbjct: 21 DLPEGCGDPEDMAAQLEEAIYVELKCCQVKYKNRIRSRLANLRDPKNPGLREKFLLGLIG 80
Query: 222 PETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKI 281
E + M+ +EMASD ++ +D ++ + ++ +D+++C RC H +
Sbjct: 81 VEKMARMTPEEMASDDLKQMRQKFVQD-SINKAQMAKFQGTK----TDLFKCDRC-HKRN 134
Query: 282 SYQHSSILDDYNLTRHVTCLNCNQYW 307
Q + D + V C C W
Sbjct: 135 CIQLHTRDGDEPMVTFVMCDECGNRW 160
>gi|307192626|gb|EFN75800.1| Transcription elongation factor S-II [Harpegnathos saltator]
Length = 278
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 156 AADKVTIDLVKAC-DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRK 214
AA +V ++ C P ++A +E A+Y ++ ++ YK + R + N+ D +N + R
Sbjct: 127 AALRVDGKVIDGCASPEELAEELEEAIYAEFKNTDNRYKNRVRSRVANLRDVKNPNLRTN 186
Query: 215 VLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECG 274
++G + P + M+A+EMASD+I+ K+ A+ + V ++ +D+ +CG
Sbjct: 187 FIVGAITPARLAVMTAEEMASDEIKQLREQFKKE-AINDAQLATVQGTK----TDLLKCG 241
Query: 275 RCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+C +Y Q + D +T V C C W
Sbjct: 242 KCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 275
>gi|194857365|ref|XP_001968937.1| GG24225 [Drosophila erecta]
gi|190660804|gb|EDV57996.1| GG24225 [Drosophila erecta]
Length = 313
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+P ++A +E A+Y ++ ++ YK + R + N+ DP+N R + G V + + M
Sbjct: 176 EPEEMAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKM 235
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ +EMASD+++ K+ A+ + V ++ +D+ +C +C +Y Q +
Sbjct: 236 TPEEMASDEMKKLREKFVKE-AINDAQLATVQGTK----TDLLKCAKCKKRNCTYNQLQT 290
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 291 RSADEPMTTFVMCNECGNRW 310
>gi|260826962|ref|XP_002608434.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
gi|229293785|gb|EEN64444.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
Length = 130
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK + R N+ DP N + RR+++ G + P+ + MSA+EMASD+++ + + ++
Sbjct: 12 YKNRVRSRAANLKDPRNPELRRRLIQGEITPQQMATMSAQEMASDEVKKFRRQVSEES-- 69
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNL-TRHVTCLNCNQYW 307
+ P ++D+++C CG Y Q+ D + + V C++C W
Sbjct: 70 IQRRQVPHADG---TMTDMFKCENCGRENCCYNQYRGFSADGPIASPFVFCMDCGNRW 124
>gi|195475592|ref|XP_002090068.1| GE19417 [Drosophila yakuba]
gi|194176169|gb|EDW89780.1| GE19417 [Drosophila yakuba]
Length = 313
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+P ++A +E A+Y ++ ++ YK + R + N+ DP+N R + G V + + M
Sbjct: 176 EPEEMAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKM 235
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ +EMASD+++ K+ A+ + V ++ +D+ +C +C +Y Q +
Sbjct: 236 TPEEMASDEMKKLREKFVKE-AINDAQLATVQGTK----TDLLKCAKCKKRNCTYNQLQT 290
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 291 RSADEPMTTFVMCNECGNRW 310
>gi|195338531|ref|XP_002035878.1| GM14545 [Drosophila sechellia]
gi|194129758|gb|EDW51801.1| GM14545 [Drosophila sechellia]
Length = 311
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+P ++A +E A+Y ++ ++ YK + R + N+ DP+N R + G V + + M
Sbjct: 174 EPEEMAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLARM 233
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
+ +EMASD+++ K+ A+ + V ++ +D+ +C +C +Y Q +
Sbjct: 234 TPEEMASDEMKKLREKFVKE-AINDAQLATVQGTK----TDLLKCAKCKKRNCTYNQLQT 288
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 289 RSADEPMTTFVMCNECGNRW 308
>gi|406607842|emb|CCH40780.1| Transcription elongation factor [Wickerhamomyces ciferrii]
Length = 240
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 17/173 (9%)
Query: 138 REIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW-CRSNGMYKFKY 196
R V + LY+ L + E V + L K I E EK+ SN Y +
Sbjct: 79 RNGVIQALYNGLC-IDSEHPPNVLLKLAKE-------IEAEVFHAEKFDTSSNTKYAQRL 130
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI 256
R L N+ N + R K+ G + P+ INMS +EMA + + + ++
Sbjct: 131 RSLTSNLRQKNNPELRNKINNGDLLPKVFINMSPREMAPE------SLKKELEEIKKKNL 184
Query: 257 FPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
F G +++ V+D + CG+C K+S YQ + D LT TC NC W
Sbjct: 185 FNAQGATQERAVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCENCGNRW 237
>gi|410901489|ref|XP_003964228.1| PREDICTED: PHD finger protein 3-like [Takifugu rubripes]
Length = 1448
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
+++ ++ + P S + ++ R VR+ L + L + E+ ++I + KA D V
Sbjct: 633 QQKQETKSKPPSSATKKPVSVEAIRRSVRDSLKEILIQRLKES--NLSISVEKASD---V 687
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A +E ++ ++ YK KYR L+FN+ D +N +KVL G + P +I MS +E+
Sbjct: 688 AKKIERELFHLNKDTDNKYKNKYRSLMFNLKDTKNNVLYKKVLKGEISPGNLIRMSPEEL 747
Query: 234 ASDKIQLW 241
AS ++ W
Sbjct: 748 ASKELAAW 755
>gi|332023706|gb|EGI63930.1| Transcription elongation factor S-II [Acromyrmex echinatior]
Length = 288
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
+Y ++ ++ YK + R + N+ D +N + R L+G + P + M+A+EMASD+I+
Sbjct: 163 IYAEFKNTDSRYKNRVRSRVANLRDVKNPNLRTNFLVGAITPARLAVMTAEEMASDEIKQ 222
Query: 241 WNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVT 299
K+ A+ + V ++ +D+ +CG+C +Y Q + D +T V
Sbjct: 223 LREQFKKE-AINDAQLATVQGTK----TDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVL 277
Query: 300 CLNCNQYW 307
C C W
Sbjct: 278 CNECGNRW 285
>gi|67588103|ref|XP_665338.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis
TU502]
gi|54655975|gb|EAL35108.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis]
Length = 332
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 164 LVKACDPIQVAILVESAMYEKWC----RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGH 219
L+K ++A +ES ++ ++ S Y + + + +N+SD +N + K+ +G
Sbjct: 184 LMKESQVCEIAAEIESVLHREYIVKGDNSVRDYNLQLKTIKWNLSDLKNPELNSKLYVGK 243
Query: 220 VKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSD-IYECGRCGH 278
+ PE I M ++EMASD Q ++ + + R +I + + CG+C
Sbjct: 244 ITPEEIARMQSREMASDAKQKEREKHKQESLEACQSDWDL---RNLIQKEGQFTCGKCKT 300
Query: 279 NKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
NK + YQ + D +T V CLNC W
Sbjct: 301 NKTTYYQMQTRSADEPMTTFVRCLNCGNRW 330
>gi|66361609|ref|XP_627328.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
gi|46228708|gb|EAK89578.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
Length = 332
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 164 LVKACDPIQVAILVESAMYEKWC----RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGH 219
L+K ++A +ES ++ ++ S Y + + + +N+SD +N + K+ +G
Sbjct: 184 LMKESQVCEIAAEIESVLHREYIVKGDNSVRDYNLQLKTIKWNLSDLKNPELNSKLYVGK 243
Query: 220 VKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSD-IYECGRCGH 278
+ PE I M ++EMASD Q ++ + + R +I + + CG+C
Sbjct: 244 ITPEEIARMQSREMASDAKQKEREKHKQESLEACQSDWDL---RNLIQKEGQFTCGKCKT 300
Query: 279 NKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
NK + YQ + D +T V CLNC W
Sbjct: 301 NKTTYYQMQTRSADEPMTTFVRCLNCGNRW 330
>gi|50310967|ref|XP_455506.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644642|emb|CAG98214.1| KLLA0F09361p [Kluyveromyces lactis]
Length = 292
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 114/281 (40%), Gaps = 44/281 (15%)
Query: 43 ITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKAKLV- 101
+ +LL T+V + K + I KL +I SW+D VA KK+KL
Sbjct: 37 VNEKLLRETKVGVVVNQFKKSSNPDIVKLVKKMILSWKDA---------VAREKKSKLSS 87
Query: 102 --------------ENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYD 147
E VK E+ + R + V I R++ LYD
Sbjct: 88 NSSSTSNNNGTSGGEAVKKEKYVSKAPRNAKNDGVKTDIYGVKI------RDMAIRALYD 141
Query: 148 ALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPE 207
AL+K S+ + +D V + + ++A L EK Y+ KYR + NI
Sbjct: 142 ALAKESEHPPVAI-LDTVMSIE-TEMANLFNPESDEKG------YRDKYRIIYSNIISKN 193
Query: 208 NQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIV 267
N D + ++ G V + ++ K++A + ++ ++K G + + V
Sbjct: 194 NPDLKHRITNGEVSAKHLVTADPKDLAPEHLKKKIEEIEKQNLFNAQ-----GATVERSV 248
Query: 268 SDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+D ++CG+C K+S YQ + D LT TC NC W
Sbjct: 249 TDRFQCGKCKQRKVSYYQLQTRSADEPLTTFCTCENCGNRW 289
>gi|240972273|ref|XP_002400972.1| transcription factor S-II, putative [Ixodes scapularis]
gi|215490968|gb|EEC00609.1| transcription factor S-II, putative [Ixodes scapularis]
Length = 255
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 163 DLVKACDPIQVAILVESAMYEKWCR---SNGMYKFKYRCLLFNISDPENQDFRRKVLLGH 219
D+ CD +A +E + C +N YK + R + N+ D +N + R VL G
Sbjct: 109 DMPDGCDLDGLAAKIEEYILSWHCEFGDTNMKYKNRVRSRVSNLKDSKNPNLRLNVLHGA 168
Query: 220 VKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHN 279
+ P+ I M+A EMASD+++ K+ + H V K +D+ +CG+C +
Sbjct: 169 IDPDRIARMTADEMASDEMKQMRQKFTKEA--INDHQMAVTGGTK---TDLLKCGKCRKS 223
Query: 280 KISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+Y Q + D +T C C W
Sbjct: 224 NCTYNQVQTRSADEPMTTFCYCNECGHRW 252
>gi|403412176|emb|CCL98876.1| predicted protein [Fibroporia radiculosa]
Length = 348
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 133 CNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
D R+ E +YDAL+ S ++++ + A +ES + ++ + G Y
Sbjct: 147 TGDKIRDKCVELIYDALASDSGAPSEQI----------MSRAKSIESTVLAEFSGTTGEY 196
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
+ K R N+ D N R V+ G + + MS++EMAS++ + D ++
Sbjct: 197 RSKIRTFFVNLKDKNNPGLRESVISGELPVQKFCRMSSQEMASEERKAA------DNRII 250
Query: 253 TGHIF-PVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYWV 308
++F +G +D ++CGRC K Y+ + D +T VT + Y++
Sbjct: 251 QENLFKALGAEEVQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTYVFSYLYYL 308
>gi|58268784|ref|XP_571548.1| positive transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113304|ref|XP_774677.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257321|gb|EAL20030.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227783|gb|AAW44241.1| positive transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 349
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 174 AILVESAMYEKWCRSNGM-YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
AI +E A + S G Y+ K R L N+ D N R +++LG+V E + +MS E
Sbjct: 219 AIGIERAANKAMNFSTGNDYRAKMRSLFLNLKDKGNPALRNEIVLGYVSTEKVASMSKDE 278
Query: 233 MASDKIQLWNHHLDKDGALVTGHIF---PVGLSRKIIVSDIYECGRCGHNKISY 283
MAS+ +++ + D ++F VG+++ +D ++CGRC K +Y
Sbjct: 279 MASESVRMLKEKIASD------NLFKAKAVGVTQ--AETDAFKCGRCHQRKCTY 324
>gi|327276421|ref|XP_003222968.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 209
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 34/184 (18%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
D+ R RE L +L +D A D ++A +E +Y+ ++ YK
Sbjct: 42 DTVRSKCREMLTSSLQTDNDYVA--------IGADCEEMAAQIEEFIYQDVKNTDLKYKN 93
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI-QLW---------NHH 244
+ R + N+ D +N D R+ VL G + PE I M+++EMAS+++ ++W H
Sbjct: 94 RVRSHISNLKDSKNPDLRKNVLCGVITPEEIAVMTSEEMASNELKEIWKAMTKEAIREHQ 153
Query: 245 LDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNC 303
+ K G T D++ C +C +Y Q + D +T V C C
Sbjct: 154 MAKTGGTQT---------------DLFTCRKCRKKNCTYTQVQTRSSDEPMTTFVVCNEC 198
Query: 304 NQYW 307
+W
Sbjct: 199 GNHW 202
>gi|255582730|ref|XP_002532142.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223528178|gb|EEF30241.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 1154
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
P VA +E+ +Y + N YK K R LLFN+ D N + R +V+ G + PE + +M+
Sbjct: 391 PQTVASTIEAELYNLFGGVNKKYKEKGRSLLFNLKDRNNPELRARVMSGEIPPEKLCSMT 450
Query: 230 AKEMASDKIQLW 241
A+E+AS ++ W
Sbjct: 451 AEELASKELSEW 462
>gi|259482276|tpe|CBF76603.1| TPA: transcription elongation factor S-II (AFU_orthologue;
AFUA_3G07670) [Aspergillus nidulans FGSC A4]
Length = 304
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---D 248
Y+ K R L N+ + N R +VL V PE + M+ +E+ SD+ + + + K D
Sbjct: 191 YRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELRSDEQREKDRKIQKENMD 250
Query: 249 GALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
A+V R I S +CG+CG K++Y + D +T TC++C + W
Sbjct: 251 KAMV------AQAERSISTS--LQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMHCGKSW 302
>gi|194894439|ref|XP_001978066.1| GG17893 [Drosophila erecta]
gi|190649715|gb|EDV46993.1| GG17893 [Drosophila erecta]
Length = 162
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 7/146 (4%)
Query: 163 DLVKACD-PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVK 221
D+ CD P +A +E A+Y + YK + R L N+ DP+N R K LLG +
Sbjct: 21 DMPAGCDDPEDMAAQLEEAIYVELKSCQVKYKNRIRSRLANLRDPKNPALREKFLLGLIS 80
Query: 222 PETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKI 281
E + M+ +EMASD ++ ++ G +D+++C RC
Sbjct: 81 VEQLARMTPEEMASDDLKQMRQKFVQESINAAQMAEFQGTK-----TDLFKCDRCQKRNC 135
Query: 282 SYQHSSILDDYNLTRHVTCLNCNQYW 307
H+ D+ +T V C C W
Sbjct: 136 IQLHTRDGDESMIT-FVMCDECGNRW 160
>gi|426222699|ref|XP_004005523.1| PREDICTED: SPOC domain-containing protein 1 [Ovis aries]
Length = 1255
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
D+ ++E L+ L K D + ++ +A +E+A++ +N YK
Sbjct: 666 DTVVRTMQEALWSRLRKHPDLVLSEKVVE--------GIAAGIEAALFNLTQATNSRYKT 717
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDG 249
KYR LLFN+ DP N + KV+ G + P ++ MS+ ++A ++ W +K G
Sbjct: 718 KYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQLAPQELARWRDREEKRG 772
>gi|302833984|ref|XP_002948555.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
gi|300266242|gb|EFJ50430.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
Length = 1482
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRS-NGMY 192
+D R VRE+L AL + DE + + + DP VA VE+ +Y+ S + Y
Sbjct: 404 DDEVRSKVREQLASALQRALDELKAEGYTEALP--DPAAVAADVETELYKLHDNSVSKDY 461
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGA 250
K K+R L FN+ D N + R +VL G + P ++ + E+A ++ W ++ A
Sbjct: 462 KAKFRSLSFNLRDNGNPELRARVLRGELPPPRLVTLGPAELARKELSEWRQKRQEEAA 519
>gi|384246623|gb|EIE20112.1| hypothetical protein COCSUDRAFT_67485 [Coccomyxa subellipsoidea
C-169]
Length = 1199
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKY 196
FRE R ++ ++L++ +E K + A P VA +E+ M++ + N Y +
Sbjct: 337 FREKQRREMKESLTRALEELKAKGHEGDLPA--PDMVAQRIEATMFKHFGGVNKEYGARN 394
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
R + FN++D N DFR KVL G ++P ++ M +EMAS+
Sbjct: 395 RSIQFNLADKSNPDFRAKVLRGDLEPAKLMTMHTQEMASE 434
>gi|30689925|ref|NP_197934.2| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|26449758|dbj|BAC42002.1| putative PHD finger protein [Arabidopsis thaliana]
gi|332006074|gb|AED93457.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 735
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E +++ + N YK K R LLFN+ D N + R V+ G + PE + NM
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418
Query: 229 SAKEMASDKIQLWNH 243
+A+E+AS ++ W
Sbjct: 419 TAEELASKELSQWRQ 433
>gi|47215864|emb|CAG02327.1| unnamed protein product [Tetraodon nigroviridis]
Length = 124
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
+Y+++ + YK + R + N+ D +N + RR VL G++ P+ I +MSA+EMAS +++
Sbjct: 1 IYQEFKSTEMKYKTRLRSRISNLKDHKNPELRRNVLCGNISPQRIASMSAEEMASAELKQ 60
Query: 241 WNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVT 299
L K+ ++ + VG + +D++ C C +Y I D +T V
Sbjct: 61 IREALTKE-SIREHQLSKVGGAE----TDMFICNNCHGKNCTYTQVQIRSADEPMTTFVL 115
Query: 300 CLNCNQYW 307
C +C W
Sbjct: 116 CNSCGNRW 123
>gi|302842544|ref|XP_002952815.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
gi|300261855|gb|EFJ46065.1| hypothetical protein VOLCADRAFT_93587 [Volvox carteri f.
nagariensis]
Length = 233
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 21/130 (16%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHL-DKDGA 250
YK R L+ ++ N D RR+VL G V+P+ ++ M +++A+ + Q L +++
Sbjct: 106 YKAAARTLVASLK--RNADLRRRVLSGQVRPDELVGMGVRQLATPQQQEEYARLQERETR 163
Query: 251 LVT--GHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSIL-----------DDYNLTRH 297
VT GH G + I SD Y CGRCG Y S D +R
Sbjct: 164 RVTLAGH----GSAASISTSD-YVCGRCGGRSCDYLDSGRRDIGKCETWGSKDGPGSSRL 218
Query: 298 VTCLNCNQYW 307
VTCL C W
Sbjct: 219 VTCLGCGHRW 228
>gi|449437376|ref|XP_004136468.1| PREDICTED: uncharacterized protein LOC101216628 [Cucumis sativus]
gi|449503562|ref|XP_004162064.1| PREDICTED: uncharacterized protein LOC101228635 [Cucumis sativus]
Length = 1124
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
P +A+ +E +++ + N YK K R LLFN+ D N + R +V+ G + PE + +M+
Sbjct: 369 PESLALKIEEELFKLFSGVNKKYKEKGRSLLFNLKDRNNPELRERVMSGEITPERLCSMT 428
Query: 230 AKEMASDKIQLW 241
A+E+AS ++ W
Sbjct: 429 AEELASKELSEW 440
>gi|344253671|gb|EGW09775.1| Transcription elongation factor A protein 1 [Cricetulus griseus]
Length = 278
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 153 SDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFR 212
+DE + L+K+ + V I Y++ ++ YK + R + D +N + R
Sbjct: 131 TDEEVTSLAKSLIKSWKKLLVPI------YQEIRNTDMKYKNRVRSRISVPKDAKNPNLR 184
Query: 213 RKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYE 272
+ VL G++ P+ M+A+EMASD+++ +L K+ A+ + G ++ +D++
Sbjct: 185 KNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKE-AIREHQMAKTGGTQ----TDLFT 239
Query: 273 CGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
CG+C +Y Q + D +T V C C W
Sbjct: 240 CGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 275
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y+ + R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 214 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AI 272
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 273 REHQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 325
>gi|171424|gb|AAA34580.1| DST1 [Saccharomyces cerevisiae]
gi|172773|gb|AAA88734.1| DNA strand transferase alpha [Saccharomyces cerevisiae]
Length = 309
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 18/174 (10%)
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSN-GMYKF 194
R+ V + LYD L+K S+ + + A +ES M + C +N YK
Sbjct: 148 LRDQVLKALYDVLAKESEHPPQSI----------LHTAKAIESEMNKVNNCDTNEAAYKA 197
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+YR + N+ N D + K+ G + PE + AK++A ++ + K L
Sbjct: 198 RYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQN-LYNA 256
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
G + + V+D + CG+C K+S YQ + D LT TC C W
Sbjct: 257 Q----GATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306
>gi|61679514|pdb|1Y1V|S Chain S, Refined Rna Polymerase Ii-tfiis Complex
gi|61679527|pdb|1Y1Y|S Chain S, Rna Polymerase Ii-Tfiis-DnaRNA COMPLEX
Length = 179
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 18/174 (10%)
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSN-GMYKF 194
R+ V + LYD L+K S+ + + A +ES M + C +N YK
Sbjct: 18 LRDQVLKALYDVLAKESEHPPQSI----------LHTAKAIESEMNKVNNCDTNEAAYKA 67
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+YR + N+ N D + K+ G + PE + AK++A ++ + K L
Sbjct: 68 RYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQN-LYNA 126
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
G + + V+D + CG+C K+S YQ + D LT TC C W
Sbjct: 127 Q----GATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 176
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 167 ACDPIQVA--ILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPET 224
A P Q A L S +Y++ ++ Y+ + R + N+ DP N RR VL G +
Sbjct: 289 ALGPPQTAGWPLTLSHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLNGAISAGL 348
Query: 225 IINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQ 284
I M+A+EMASD+++ + + ++ A+ + G + +D+ +C +C +Y
Sbjct: 349 IAKMTAEEMASDELRKLRNAMTQE-AIREHQMAKTGGT----TTDLLQCSKCKKKNCTYN 403
Query: 285 HSSIL---------------------DDYNLTRHVTCLNCNQYW---VSTNLSFGVLP 318
S+L D +T V C C W +ST++SF +LP
Sbjct: 404 QVSLLASDKTVSHCVLLADCWMQTRSADEPMTTFVLCNECGHRWKVCMSTSVSF-LLP 460
>gi|6321395|ref|NP_011472.1| Dst1p [Saccharomyces cerevisiae S288c]
gi|1729915|sp|P07273.4|TFS2_YEAST RecName: Full=Transcription elongation factor S-II; AltName:
Full=DNA strand transfer protein alpha; Short=STP-alpha;
AltName: Full=DNA strand transferase 1; AltName:
Full=Pyrimidine pathway regulatory protein 2
gi|34810565|pdb|1PQV|S Chain S, Rna Polymerase Ii-Tfiis Complex
gi|218517|dbj|BAA02046.1| transcriptional elongation factor S-II [Saccharomyces cerevisiae]
gi|1322528|emb|CAA96744.1| DST1 [Saccharomyces cerevisiae]
gi|151943248|gb|EDN61561.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
gi|190407007|gb|EDV10274.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
RM11-1a]
gi|256271330|gb|EEU06396.1| Dst1p [Saccharomyces cerevisiae JAY291]
gi|285812157|tpg|DAA08057.1| TPA: Dst1p [Saccharomyces cerevisiae S288c]
gi|323304905|gb|EGA58662.1| Dst1p [Saccharomyces cerevisiae FostersB]
gi|323309085|gb|EGA62313.1| Dst1p [Saccharomyces cerevisiae FostersO]
gi|323337623|gb|EGA78868.1| Dst1p [Saccharomyces cerevisiae Vin13]
gi|323348527|gb|EGA82771.1| Dst1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354949|gb|EGA86780.1| Dst1p [Saccharomyces cerevisiae VL3]
gi|349578179|dbj|GAA23345.1| K7_Dst1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765583|gb|EHN07090.1| Dst1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299216|gb|EIW10310.1| Dst1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 309
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 18/174 (10%)
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSN-GMYKF 194
R+ V + LYD L+K S+ + + A +ES M + C +N YK
Sbjct: 148 LRDQVLKALYDVLAKESEHPPQSI----------LHTAKAIESEMNKVNNCDTNEAAYKA 197
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+YR + N+ N D + K+ G + PE + AK++A ++ + K L
Sbjct: 198 RYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQN-LYNA 256
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
G + + V+D + CG+C K+S YQ + D LT TC C W
Sbjct: 257 Q----GATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306
>gi|452836512|gb|EME38456.1| hypothetical protein DOTSEDRAFT_75850 [Dothistroma septosporum
NZE10]
Length = 313
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 133 CNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW-CRSNGM 191
D+ R+ + +YD ++ +S+E+ D V + VA VE A +E + +N
Sbjct: 149 TGDAVRDGCLKLMYDGIAFMSEESPDTV----------MDVARKVELAAFEHFKSETNQD 198
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK K R L N+ N R+ V ++P + M++ E+ S++ + + L+K+
Sbjct: 199 YKAKMRSLFQNLKMKNNTLLRKDVFTMKIEPTRFVTMTSDELKSEEKRKKDEELEKENMR 258
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+ + +S + CG+C ++++Y + D LT C C W
Sbjct: 259 QA-----MTAVEEKAISTTFTCGKCKQSRVAYSQAQTRSADEPLTTFCECTMCGHRW 310
>gi|328767604|gb|EGF77653.1| hypothetical protein BATDEDRAFT_91451 [Batrachochytrium
dendrobatidis JAM81]
Length = 296
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 116/282 (41%), Gaps = 25/282 (8%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHP--SQKIQKLAYDLISSWRDMCWDVEDV 89
I L ++ T + L ST++ + KHP ++KI++L+ +L+ W+ V
Sbjct: 31 IQLLTTLRTFKATTETLKSTRIGVFATELRKHPNATEKIKQLSRELVYKWKTDIGRVSMS 90
Query: 90 EYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSIS---CMIKCNDSFREIVREKLY 146
E KK ++ K ++ + P+ S + D R+ LY
Sbjct: 91 ESSESEKKQ--IDTPKTSTSSSVSTPTSTTHTAPRTLASDNVTLSSTRDKIRDGCAGMLY 148
Query: 147 DALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDP 206
+L+ +D A V ++A +E ++ ++ YK + R L N+
Sbjct: 149 SSLASGTDAVASVVA----------KIASSIEKHIFAACECTDAKYKSRIRTLTSNL--K 196
Query: 207 ENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKII 266
N R +VL G + + M+A+EM S++ L+ + A V + +
Sbjct: 197 LNASLRSQVLGGKISTDRFAMMTAEEMMSEE-----RVLEVEKAKKNSMADAVSAANQEA 251
Query: 267 VSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+D++ CGRC K + YQ + D +T VTC +C W
Sbjct: 252 ETDMFRCGRCKQRKATYYQMQTRSADEPMTTFVTCCHCGNKW 293
>gi|351709942|gb|EHB12861.1| SPOC domain-containing protein 1 [Heterocephalus glaber]
Length = 1116
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E+A+++ ++ YK KYR LLFN+ DP N D KV+ G V P ++ M++ +
Sbjct: 550 IAAGIEAALFDLTQGTSCRYKIKYRSLLFNLRDPRNPDLFLKVVHGDVTPHDLVRMNSVQ 609
Query: 233 MASDKIQLWNHHLDKDG 249
+A ++ W +K G
Sbjct: 610 LAPQELARWRDQEEKRG 626
>gi|344306328|ref|XP_003421840.1| PREDICTED: death-inducer obliterator 1 [Loxodonta africana]
Length = 2247
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 134 NDSFREIVREKLYDAL-SKVSDEAADKVTIDLVKACDPI-QVAILVESAMYEKWCRSNGM 191
N R+ +R L + L +VSD + DL+ + + +VA+ +E M+ + ++
Sbjct: 673 NSQIRQNIRRSLKEILWKRVSD------SDDLIMTENEVGRVALRIEKEMFSLFQVTDNR 726
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YK KYR ++FN+ DP+NQ +VL + ++ M +E+AS ++ W
Sbjct: 727 YKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELASKELSTW 776
>gi|168012823|ref|XP_001759101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689800|gb|EDQ76170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 90
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 7/88 (7%)
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI 256
R ++FN+ D N DFRR++LLG +KPE +++M+ +MAS++ + + + +
Sbjct: 1 RSIMFNVKDDTNLDFRRRILLGRIKPEAVVSMTFSDMASEQRK------KETEGIKAKSM 54
Query: 257 FPVGLSRKIIVS-DIYECGRCGHNKISY 283
F L + S D ++CG+C K +Y
Sbjct: 55 FECELGATAVASTDQFKCGKCLQRKTTY 82
>gi|42573473|ref|NP_974833.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|332006075|gb|AED93458.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 997
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E +++ + N YK K R LLFN+ D N + R V+ G + PE + NM
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418
Query: 229 SAKEMASDKIQLW 241
+A+E+AS ++ W
Sbjct: 419 TAEELASKELSQW 431
>gi|207345303|gb|EDZ72168.1| YGL043Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323333438|gb|EGA74832.1| Dst1p [Saccharomyces cerevisiae AWRI796]
Length = 242
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 18/174 (10%)
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSN-GMYKF 194
R+ V + LYD L+K S+ + + A +ES M + C +N YK
Sbjct: 81 LRDQVLKALYDVLAKESEHPPQSI----------LHTAKAIESEMNKVNNCDTNEAAYKA 130
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+YR + N+ N D + K+ G + PE + AK++A ++ + K L
Sbjct: 131 RYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQN-LYNA 189
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
G + + V+D + CG+C K+S YQ + D LT TC C W
Sbjct: 190 Q----GATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 239
>gi|237841743|ref|XP_002370169.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|95007190|emb|CAJ20411.1| transcription elongation factor s-II, putative [Toxoplasma gondii
RH]
gi|211967833|gb|EEB03029.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|221482635|gb|EEE20973.1| transcription elongation factor, putative [Toxoplasma gondii GT1]
gi|221503171|gb|EEE28877.1| transcription elongation factor, putative [Toxoplasma gondii VEG]
Length = 418
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 121/308 (39%), Gaps = 35/308 (11%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEY 91
++AL + ++ +LL T++ + + HP +I+ L+ W+ +
Sbjct: 112 LEALTVLDRVDMSRELLAKTRIGVSVGKLRTHPDSQIRSRCTQLVHKWKAGISGGGLAKE 171
Query: 92 VAVTKKAKL---------------VENVKVEEVTNGEERRHDSG-------NVPKKSISC 129
A ++ N K +++ R D G P+K+ +
Sbjct: 172 NATSRPGPNGRGQGKPPTGTLGNDTANEKAHGLSSNSSPRADEGLHGVPVDRAPEKASTA 231
Query: 130 M-----IKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEK 184
+ D+ R+ R L+ AL D + + ++ + +VA +E A++++
Sbjct: 232 VEDYPGPASGDAVRDRARGFLWRALV---DGMQSRRDLGADRSGETARVAAEIEKALWQE 288
Query: 185 WC---RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
+C +S Y + + L +N +D +N D KVL G PE + MS+ ++ASD+ +
Sbjct: 289 YCVRRKSTKEYNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQLAIMSSADLASDEKKRM 348
Query: 242 NHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVT 299
K+ + + L + C +C K Y Q + D +T VT
Sbjct: 349 RELQKKESMEACQSDWEMKKLMEGASEGGQFPCFKCRTTKTVYFQMQTRSSDEPMTTFVT 408
Query: 300 CLNCNQYW 307
CL C W
Sbjct: 409 CLECGNRW 416
>gi|432905920|ref|XP_004077476.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1575
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
++ R VR+ L D L++ E+ ++++ +VA E ++ + ++ YK
Sbjct: 625 EAIRRSVRDSLKDILTQRLKESDLHISVERAS-----EVAKKTERELFHLFKDTDHKYKN 679
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR L+FN+ D +N ++VL G + P +I MS +E+AS ++ W
Sbjct: 680 KYRSLIFNLKDTKNNVLFKRVLKGEISPANLIRMSPEELASKELAAW 726
>gi|296081928|emb|CBI20933.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
P +A +E+ +++ + N YK K R LLFN+ D N + R +V+ G + PE + +M+
Sbjct: 387 PQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMT 446
Query: 230 AKEMASDKIQLW 241
A+E+AS ++ W
Sbjct: 447 AEELASKELSEW 458
>gi|147841857|emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]
Length = 1059
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
P +A +E+ +++ + N YK K R LLFN+ D N + R +V+ G + PE + +M+
Sbjct: 405 PQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMT 464
Query: 230 AKEMASDKIQLW 241
A+E+AS ++ W
Sbjct: 465 AEELASKELSEW 476
>gi|115385046|ref|XP_001209070.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196762|gb|EAU38462.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 305
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK---D 248
Y+ K R L N+ + N R +VL V PE + MS E+ S + + + + K D
Sbjct: 192 YRTKIRSLYQNLKNKSNPTLRVRVLSSEVTPEHFVKMSHDELRSAEQREQDAKIQKQNMD 251
Query: 249 GALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
A+V R I S +CG+CG K++Y + D +T TC+NC + W
Sbjct: 252 KAMV------AQAERSISTS--LQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMNCGKSW 303
>gi|258575459|ref|XP_002541911.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
gi|237902177|gb|EEP76578.1| transcription elongation factor S-II [Uncinocarpus reesii 1704]
Length = 303
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 27/170 (15%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNI 203
LYD L S E+ V +Q +I VE+A Y + + Y+ K R L N+
Sbjct: 152 LYDGLCLSSTESPRTV----------LQKSIEVEAAAYNAFGPETKDQYRTKIRSLYQNL 201
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDK-----IQLWNHHLDKDGALVTGHIFP 258
+ N R +VL + + + M+ E+ SD+ +++ ++DK A+V
Sbjct: 202 KNKSNLSLRMRVLSNEITSDKFVRMTHDELKSDERREEDLKIQKENMDK--AMV------ 253
Query: 259 VGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
R I S +CG+CG K++Y + D +T TCL C + W
Sbjct: 254 AKAERSI--SKSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLACGKSW 301
>gi|225430091|ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267937 [Vitis vinifera]
Length = 1146
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
P +A +E+ +++ + N YK K R LLFN+ D N + R +V+ G + PE + +M+
Sbjct: 405 PQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSMT 464
Query: 230 AKEMASDKIQLW 241
A+E+AS ++ W
Sbjct: 465 AEELASKELSEW 476
>gi|224143046|ref|XP_002324832.1| predicted protein [Populus trichocarpa]
gi|222866266|gb|EEF03397.1| predicted protein [Populus trichocarpa]
Length = 633
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E+ +++ + N YK K R LLFN+ D N + R KV+ G + P + +M
Sbjct: 280 DPRVLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELREKVMSGEIPPGRLCSM 339
Query: 229 SAKEMASDKIQLW 241
+A+E+AS ++ W
Sbjct: 340 TAEELASKELSEW 352
>gi|297808571|ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
gi|297318006|gb|EFH48428.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E +++ + N YK K R LLFN+ D N + R V+ G + PE + NM
Sbjct: 353 DPELLASKIELELFKLFRGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 412
Query: 229 SAKEMASDKIQLW 241
+A+E+AS ++ W
Sbjct: 413 TAEELASKELSQW 425
>gi|431894648|gb|ELK04448.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 269
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK + R + N+ D +N RR+VL G + P+ I M+++EMASD+++ + K+ A+
Sbjct: 3 YKNRVRSRISNLKDAKNPGLRRQVLCGSITPQQIAVMTSEEMASDELKEIRKAMTKE-AI 61
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G ++ +D++ CG+C +Y Q + D +T V C C W
Sbjct: 62 REHQMARTGGTQ----TDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 114
>gi|4874303|gb|AAD31365.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 643
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E+ +++ + N YK K R LLFN+ D N R KV+ G + E + +M
Sbjct: 264 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 323
Query: 229 SAKEMASDKIQLWNH 243
SA+E+AS ++ W
Sbjct: 324 SAEELASKELAEWRQ 338
>gi|351714883|gb|EHB17802.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 2261
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 89 VEYVAVTKKA----KLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREK 144
V VA +KKA LV +++ T+ +G + S + N R+ +R
Sbjct: 624 VAMVAASKKALGSAALVGSIRKPAATSAPTTVPATGRLGGTG-SAQSQPNSQIRQNIRRS 682
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
L + L K +++ D + + + ++A+ +E M+ + ++ YK KYR ++FN+
Sbjct: 683 LKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLK 738
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
DP+NQ +VL + ++ M +E+ S ++ +W
Sbjct: 739 DPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMW 775
>gi|378733301|gb|EHY59760.1| transcription elongation factor S-II [Exophiala dermatitidis
NIH/UT8656]
Length = 306
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
ND+ R +YD L SD ++ +DL K + A+ + A K S+ +YK
Sbjct: 140 NDTARNNCIGLMYDGLCLGSDLPMKQI-LDLAKEIE--SAALNLPEA---KGSSSSPVYK 193
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMAS-----DKIQLWNHHLDKD 248
K R L N+ + N R+++L G V ++M+ +EM S ++I++ +++
Sbjct: 194 DKIRSLYQNLKNKSNPGLRKRILSGEVTAVRFVSMTHEEMKSKQQREEEIKIAKENMN-- 251
Query: 249 GALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
A+V + VS ECG+C K+SY + D +T CLNC W
Sbjct: 252 NAMVA--------QEEKSVSTSLECGKCHQKKVSYSQAQTRSADEPMTTFCECLNCGNRW 303
>gi|294880257|ref|XP_002768947.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
gi|239871976|gb|EER01665.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
Length = 621
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 173 VAILVESAMYEKWCRS--NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
+A +E A+Y+K RS + Y+ YR + FN+SDP+N RR+VL G + P+ ++ S
Sbjct: 349 LASNIEGALYDKHERSIKSKAYRAAYRMVNFNLSDPQNASLRRRVLTGEMSPQHLVTASH 408
Query: 231 KEMASDKIQ 239
E+ SD ++
Sbjct: 409 DELGSDSLK 417
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 14/184 (7%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL D V D ++A +E +Y++ ++ Y+
Sbjct: 189 GDSVRDKCVEMLAAALKAEDDYKDYGVNCD--------KMASEIEDHIYQELKSTDMKYR 240
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 241 NRVRSRISNLKDPRNPGLRRNVLSGAISSGLIAKMTAEEMASDELRELRNAMTQE-AIRE 299
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYWVSTNL 312
+ G + +D+ +C +C +Y Q + D +T V C C W +L
Sbjct: 300 HQMAKTGGT----TTDLLQCSKCKKKNCTYNQMQTRSADEPMTTFVLCNECGHRWKVMSL 355
Query: 313 SFGV 316
G
Sbjct: 356 IPGT 359
>gi|225683287|gb|EEH21571.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb03]
gi|226288233|gb|EEH43745.1| transcription elongation factor S-II [Paracoccidioides brasiliensis
Pb18]
Length = 306
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 13/142 (9%)
Query: 171 IQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
+Q A VE+A Y + + Y+ K R L N+ + N R +VL V E + M+
Sbjct: 171 LQKATEVEAAAYRAFGPETKEQYRTKMRSLFQNLKNKSNPGLRIRVLSNEVTAERFVRMT 230
Query: 230 AKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHS 286
E+ SD + + K D A+V R I S +CG+CG K++Y +
Sbjct: 231 HDELKSDAQREEERRIQKENMDKAMV------AKAERSISTS--LQCGKCGQKKVTYTEA 282
Query: 287 SILD-DYNLTRHVTCLNCNQYW 307
D +T TC+ C + W
Sbjct: 283 QTRSADEPMTLFCTCVVCGKSW 304
>gi|79563173|ref|NP_180135.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|330252635|gb|AEC07729.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 745
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E+ +++ + N YK K R LLFN+ D N R KV+ G + E + +M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 229 SAKEMASDKIQLWNH 243
SA+E+AS ++ W
Sbjct: 375 SAEELASKELAEWRQ 389
>gi|51968872|dbj|BAD43128.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 745
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E+ +++ + N YK K R LLFN+ D N R KV+ G + E + +M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 229 SAKEMASDKIQLWNH 243
SA+E+AS ++ W
Sbjct: 375 SAEELASKELAEWRQ 389
>gi|295672377|ref|XP_002796735.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283715|gb|EEH39281.1| transcription elongation factor S-II [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 306
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 13/142 (9%)
Query: 171 IQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
+Q A VE+A Y + + Y+ K R L N+ + N R +VL V E + M+
Sbjct: 171 LQKATEVEAAAYRAFGPETKEQYRTKMRSLFQNLKNKSNPGLRIRVLSNEVTAERFVRMT 230
Query: 230 AKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHS 286
E+ SD + + K D A+V R I S +CG+CG K++Y +
Sbjct: 231 HDELKSDAQREEERRIQKENMDKAMV------AKAERSISTS--LQCGKCGQKKVTYTEA 282
Query: 287 SILD-DYNLTRHVTCLNCNQYW 307
D +T TC+ C + W
Sbjct: 283 QTRSADEPMTLFCTCVVCGKSW 304
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D V + + +VA+ +E M+ + ++ YK
Sbjct: 685 NSQIRQNIRRSLKEILWKRVNDSDDLVMTE----SEVGKVALNIEKEMFNLFQGTDNRYK 740
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ +W
Sbjct: 741 SKYRSIMFNLKDPKNQGLFHRVLREEISLSKLVRMKPEELLSKELSVW 788
>gi|297821975|ref|XP_002878870.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
gi|297324709|gb|EFH55129.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E+ +++ + N YK K R LLFN D N R KV+ G + E + +M
Sbjct: 296 DPQVLAFEIEAELFKLFGGVNKKYKEKGRSLLFNFKDKSNPKLREKVMYGEIAAERLCSM 355
Query: 229 SAKEMASDKIQLWNH 243
SA+E+AS ++ W
Sbjct: 356 SAEELASKELAEWRQ 370
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E +Y + ++ Y+ + R + N+ DP+N RR VL G + I
Sbjct: 211 CD--KMASEIEDHIYRELKSTDMKYRNRVRSRISNLKDPKNPGLRRNVLSGAISTGLIAK 268
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSS 287
M A+EMASD+++ + + ++ G + +D+ +C +C +Y
Sbjct: 269 MMAEEMASDELKELRNAMTQEAIREHQMAKTSGTN-----TDLLQCSKCKKKNCTYNQVQ 323
Query: 288 ILD-DYNLTRHVTCLNCNQYW 307
L D +T V C C W
Sbjct: 324 TLSADEPMTTFVLCNECGHRW 344
>gi|444318181|ref|XP_004179748.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
gi|387512789|emb|CCH60229.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
Length = 308
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 134 NDSFREIVREKLYDALSKVSDEA-------ADKVTIDLVKACDPIQVAILVESAMYEKWC 186
N R++V + LYDAL K S E+ A +V +++ K DP + EK
Sbjct: 144 NHKLRDMVVKALYDALVKDSTESSSLILKLATEVELEMKKFSDP---------DVNEK-- 192
Query: 187 RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLD 246
Y+ KYR + N+ N + + +++ G V P ++ KE+A + ++ +
Sbjct: 193 ----QYRDKYRVVYSNLISKNNPELKFRIVGGDVSPARLVTCDPKELAPESLKKELEEIA 248
Query: 247 KDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQ 305
K L V S V+D + CG+C K+S YQ + D LT TC C
Sbjct: 249 KKN-LYNAQGATVQRS----VTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGN 303
Query: 306 YW 307
W
Sbjct: 304 RW 305
>gi|195566922|ref|XP_002107024.1| GD17224 [Drosophila simulans]
gi|194204421|gb|EDX17997.1| GD17224 [Drosophila simulans]
Length = 141
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 10/143 (6%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP A +E A+Y + YK + R L N+ DP+N R K L+G + P+ + M
Sbjct: 7 DPHDKAAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQELSRM 66
Query: 229 SAKEMASDKIQLWNHHLDKD--GALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHS 286
+ +EMASD ++ +D A G++ + ++ ++C RC + H
Sbjct: 67 TPEEMASDDLKQMRQQYVQDSINAAQLGNV-------EGTKTNQFKCERCQKRNCTQLHI 119
Query: 287 SILDDYNLTRHVTCLNCNQYWVS 309
D+ +T V C +C W S
Sbjct: 120 RDGDEPIIT-FVMCDDCGNRWKS 141
>gi|195166102|ref|XP_002023874.1| GL27309 [Drosophila persimilis]
gi|194106034|gb|EDW28077.1| GL27309 [Drosophila persimilis]
Length = 2185
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 138 REIVREKLYDALSKVSDEAADKVTIDLVKACDPI---QVAILVESAMYEKW-CRSNGMYK 193
R ++E+L + + D T + PI Q VES MY + C YK
Sbjct: 1445 RRTLKEQLLARIKEAHDAEQSAGTSTTTQWLTPIEAEQFVKSVESEMYNSFGCDVGSKYK 1504
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR L+FNI D +N+ K+ V+P+ ++ M+ +E+AS ++ W
Sbjct: 1505 SKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELASQELAKW 1552
>gi|198450551|ref|XP_001358032.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
gi|198131086|gb|EAL27169.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
Length = 2182
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 138 REIVREKLYDALSKVSDEAADKVTIDLVKACDPI---QVAILVESAMYEKW-CRSNGMYK 193
R ++E+L + + D T + PI Q VES MY + C YK
Sbjct: 1443 RRTLKEQLLARIKEAHDAEQSAGTSTTTQWLTPIEAEQFVKSVESEMYNSFGCDVGSKYK 1502
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR L+FNI D +N+ K+ V+P+ ++ M+ +E+AS ++ W
Sbjct: 1503 SKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELASQELAKW 1550
>gi|356509950|ref|XP_003523705.1| PREDICTED: uncharacterized protein LOC100791982 [Glycine max]
Length = 1090
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
P +A +E+ +++ + N YK K R LLFN+ D N + R +V+ G + PE + +M+
Sbjct: 363 PKLLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDHNNPELRERVMFGKIPPEQLCSMT 422
Query: 230 AKEMASDKIQLW 241
A+E+AS ++ W
Sbjct: 423 AEELASKELSQW 434
>gi|154288118|ref|XP_001544854.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408495|gb|EDN04036.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 378
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 171 IQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
+Q AI VESA Y + + Y+ K R L N+ + N D R +VL + P+ + M+
Sbjct: 237 LQKAIQVESAAYNAFGPETKEQYRTKMRSLFQNLKNKSNPDLRVRVLSNEITPDKFVRMT 296
Query: 230 AKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHS 286
E+ SD + + K D A+V R I S +CG+CG K++Y +
Sbjct: 297 HDELKSDAQREEERRIHKENMDKAMV------AKAERSISTS--LQCGKCGQKKVTYTEA 348
Query: 287 SILD-DYNLTRHVTCLN 302
D +T TC+
Sbjct: 349 QTRSADEPMTLFCTCVG 365
>gi|76096375|ref|NP_780760.2| death-inducer obliterator 1 isoform 3 [Mus musculus]
gi|152031593|sp|Q8C9B9.4|DIDO1_MOUSE RecName: Full=Death-inducer obliterator 1; Short=DIO-1; AltName:
Full=Death-associated transcription factor 1;
Short=DATF-1
Length = 2256
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 112 GEERRHDSGNVPKKSIS---------CMIKCNDSFREIVREKLYDALSKVSDEAADKVTI 162
G R+ S NVP S + + N R+ +R L + L K +++ D +
Sbjct: 633 GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMT 692
Query: 163 DLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKP 222
+ + ++A+ +E M+ + ++ YK KYR ++FN+ DP+NQ +VL +
Sbjct: 693 E----NEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISL 748
Query: 223 ETIINMSAKEMASDKIQLW 241
++ M +E+ S ++ +W
Sbjct: 749 AKLVRMKPEELVSKELSMW 767
>gi|148675399|gb|EDL07346.1| death inducer-obliterator 1, isoform CRA_a [Mus musculus]
Length = 2056
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 112 GEERRHDSGNVPKKSIS---------CMIKCNDSFREIVREKLYDALSKVSDEAADKVTI 162
G R+ S NVP S + + N R+ +R L + L K +++ D +
Sbjct: 476 GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMT 535
Query: 163 DLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKP 222
+ + ++A+ +E M+ + ++ YK KYR ++FN+ DP+NQ +VL +
Sbjct: 536 E----NEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISL 591
Query: 223 ETIINMSAKEMASDKIQLW 241
++ M +E+ S ++ +W
Sbjct: 592 AKLVRMKPEELVSKELSMW 610
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 119 SGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVE 178
SG P +S + N R+ +R L + L K +++ D + + + ++A+ +E
Sbjct: 695 SGASPSQS-----QPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIE 745
Query: 179 SAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
M+ + ++ YK KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++
Sbjct: 746 KEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 805
Query: 239 QLW 241
+W
Sbjct: 806 SMW 808
>gi|115400495|ref|XP_001215836.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191502|gb|EAU33202.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 885
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+A+ +E AMY+ C G YK + R +LFN+ +N R ++L+G + P+++
Sbjct: 337 QIALAIEYAMYQNICGGAGEPTEAYKLQLRTILFNVK--KNTSLRDRLLVGSLSPDSLSK 394
Query: 228 MSAKEMASDKIQLWNHHLDKD 248
MS+++MAS+++Q + + ++
Sbjct: 395 MSSQDMASEELQQKDAEIKRE 415
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 134 NDSFREIVREKLYDALSK-VSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
N R+ +R L D L K VSD K+T + V ++A +E M+ ++ Y
Sbjct: 654 NTQMRQNIRRSLTDILFKRVSDSDDLKMTENEVG-----RLAFAIEKEMFNLCLSTDSKY 708
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
K KYR L+ ++ DP+N+ KV+ G V P ++ + A+E+ S ++ W
Sbjct: 709 KNKYRTLMLHLKDPKNKGLFYKVMGGDVTPFRLVRLGAEELVSREMSEW 757
>gi|401625778|gb|EJS43771.1| dst1p [Saccharomyces arboricola H-6]
Length = 309
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 18/174 (10%)
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWC-RSNGMYKF 194
R+ V + LYD L+K S+ + + A +E M + C S +YK
Sbjct: 148 LRDQVLKALYDVLAKDSEHPPQSI----------LHTAKAIEDEMNKINNCDSSEALYKA 197
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+YR + NI N D + K+ G + PE + AK++A ++ + K L
Sbjct: 198 RYRIIYSNIISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEISKQN-LYNA 256
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
G + + V+D + CG+C K+S YQ + D LT TC C W
Sbjct: 257 Q----GATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306
>gi|444728032|gb|ELW68496.1| Zinc finger protein 436 [Tupaia chinensis]
Length = 763
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 169 DPIQVAILVESAMYEKWCRSNGM-YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
D Q A + Y + S M Y+ + R + N+ DP N RRKVL G + I
Sbjct: 137 DTAQCARSLAQRRYSRELSSTDMKYRNRVRSRISNLKDPRNPGLRRKVLSGAIAAGLIAK 196
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHS 286
M+A+EMASD+++ + + ++ A+ + G + +D+++C +C +Y Q
Sbjct: 197 MTAEEMASDELRELRNAMTQE-AIREHQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQ 251
Query: 287 SILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 252 TRSADEPMTTFVLCNECGNRW 272
>gi|348685682|gb|EGZ25497.1| transcription elongation factor [Phytophthora sojae]
Length = 305
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 123/301 (40%), Gaps = 34/301 (11%)
Query: 25 VVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCW 84
V ++ ++ L ++ +++TY +L T++ + + KH ++KI LA L+ SW++M
Sbjct: 19 VTDQGEALEVLRALEKTTVTYAILKETKMGHTVGKLRKHENEKIASLARLLVKSWKNMAL 78
Query: 85 ----DVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREI 140
K + +NG + + S + D R
Sbjct: 79 SPKASSSISSSSKPPAKKETSPKPSSSPGSNGLKTAPKTPAARVSSTPFIPAGLDKVRAT 138
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW-----CRSNGMYKFK 195
VR KL + L EA++ DP QVA VE AM + Y K
Sbjct: 139 VRTKLKEIL-----EASE--------GGDPGQVAAAVEVAMARTYHMGAPGEQKKEYMAK 185
Query: 196 YRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGH 255
YR L FN+ +N + R+ +L +V + ++ M+A+E+A+++ + L +D A
Sbjct: 186 YRQLSFNLK--KNGELRQNLLDDNVSGDQLVKMTAEELATEEKRAQIEKL-RDDAFQEAR 242
Query: 256 IFPVGLSRKII--------VSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQY 306
+ + I ++ CGRC +K S Q + D +T V C NC
Sbjct: 243 LDWAEANHDKIQKQTGTEGTKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVMCHNCGNR 302
Query: 307 W 307
W
Sbjct: 303 W 303
>gi|156841304|ref|XP_001644026.1| hypothetical protein Kpol_1026p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156114659|gb|EDO16168.1| hypothetical protein Kpol_1026p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 323
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 20/178 (11%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW-CRSN-GM 191
N R++V + YDAL+K S+ + + C I E M + + C SN
Sbjct: 159 NHKLRDMVIKAFYDALAKGSEHPPKSI----LATCKSI------EEEMNKAYDCDSNEKS 208
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK +YR + NI +QD + K+ G + + N KE+A + H K +
Sbjct: 209 YKERYRVIYSNIISKNHQDLKHKINNGDITAVFLANCDTKELAPE------HLKQKMEEI 262
Query: 252 VTGHIFPV-GLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
++F G + + V+D + CG+C K+S YQ + D LT TC C W
Sbjct: 263 TRQNLFNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 320
>gi|356515496|ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808809 [Glycine max]
Length = 1143
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
P +A +E+ +++ + N YK K R LLFN+ D N + R +V+ G + PE + +M+
Sbjct: 414 PELLASRIEAELFKLFQGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIPPEQLCSMT 473
Query: 230 AKEMASDKIQLW 241
A+E+AS ++ W
Sbjct: 474 AEELASKELSQW 485
>gi|301780734|ref|XP_002925785.1| PREDICTED: death-inducer obliterator 1-like [Ailuropoda
melanoleuca]
Length = 2165
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M++ + ++ YK
Sbjct: 665 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----SEVGKIALHIEKEMFQLFQVTDNRYK 720
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ W
Sbjct: 721 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTW 768
>gi|281352337|gb|EFB27921.1| hypothetical protein PANDA_015330 [Ailuropoda melanoleuca]
Length = 2163
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M++ + ++ YK
Sbjct: 665 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----SEVGKIALHIEKEMFQLFQVTDNRYK 720
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ W
Sbjct: 721 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTW 768
>gi|224092388|ref|XP_002309587.1| predicted protein [Populus trichocarpa]
gi|222855563|gb|EEE93110.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E+ +++ + N YK K R LLFN+ D N + R KV+ G + P + +M
Sbjct: 390 DPQFLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRSNPELREKVMSGEITPGRLCSM 449
Query: 229 SAKEMASDKIQLW 241
+A+E+AS ++ W
Sbjct: 450 TAEELASKELSEW 462
>gi|156541048|ref|XP_001600804.1| PREDICTED: transcription elongation factor S-II-like [Nasonia
vitripennis]
Length = 312
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKAC-DPIQVAILVESAMYEKWCRSNGMYK 193
D+ R RE L AL +V + + C P ++A +E A++ ++ ++ Y+
Sbjct: 149 DAVRLKCRELLASAL---------QVEGNTIDGCASPEELAEELEEAIFGEFKNTDNKYR 199
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ D +N R ++G + P + M+A+EMASD+I+ K+ A+
Sbjct: 200 NRVRSRVANLRDSKNPTLRTNFIIGAITPGRLATMTAEEMASDEIKQLREQFKKE-AIND 258
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ V ++ +D+ +CG+C +Y Q + D +T V C C W
Sbjct: 259 AQLATVQGTK----TDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 309
>gi|348680251|gb|EGZ20067.1| hypothetical protein PHYSODRAFT_495059 [Phytophthora sojae]
Length = 118
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 24/127 (18%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDK--------IQLWNH 243
Y K R LLFN+ D N D R +++ G + +++ M+ ++MA+ + I+ H
Sbjct: 3 YAHKARTLLFNLKDSRNVDLRNRLVSGELPSHSLVRMNGRDMANPQLVRQRKEWIRKRTH 62
Query: 244 HLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQH---SSILDDYNLTRHVTC 300
+ +DG G SD++EC CG ++ Y+ +++D + V C
Sbjct: 63 EVMRDGREAEG-----------FESDLFECRNCGSSRTRYRQWRRKAVVDRTRII--VIC 109
Query: 301 LNCNQYW 307
L C W
Sbjct: 110 LRCPNRW 116
>gi|348554091|ref|XP_003462859.1| PREDICTED: death-inducer obliterator 1 [Cavia porcellus]
Length = 2259
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 719
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ +W K
Sbjct: 720 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWKERPTK 773
>gi|354481959|ref|XP_003503168.1| PREDICTED: death-inducer obliterator 1 [Cricetulus griseus]
Length = 2263
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 722
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ +W
Sbjct: 723 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMW 770
>gi|392339728|ref|XP_003753889.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
gi|392346978|ref|XP_003749689.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
Length = 2258
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 666 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 721
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ +W
Sbjct: 722 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMW 769
>gi|149034011|gb|EDL88794.1| death associated transcription factor 1 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 2099
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 507 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 562
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ +W
Sbjct: 563 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMW 610
>gi|401395411|ref|XP_003879596.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
gi|325114003|emb|CBZ49561.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
Length = 418
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 18/181 (9%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC---RSNGM 191
D R + L D + D AD+ + + +VA +E A+++++C +S
Sbjct: 246 DRARGFLWRALVDGMQSGRDLGADR-------SGETARVAAEIEKALWQEYCVKRKSTKE 298
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y + + L +N +D +N D KVL G PE + M++ ++ASD+ + K+
Sbjct: 299 YNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQLATMNSADLASDEKKRMRELQKKESME 358
Query: 252 VTGHIFPVGLSRKIIVSDI----YECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQY 306
+ + +K++ + C +C K Y Q + D +T VTCL C
Sbjct: 359 ACQSDWEM---KKLMEGGTDGGQFPCFKCRTTKTVYFQMQTRSSDEPMTTFVTCLECGNR 415
Query: 307 W 307
W
Sbjct: 416 W 416
>gi|156040461|ref|XP_001587217.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum
1980]
gi|154696303|gb|EDN96041.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum 1980
UF-70]
Length = 301
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
A+ VE A ++ + YK K R L N+ N R++V+ G ++P + M+ +E+
Sbjct: 169 AMAVEQAAFDHFGGETKDYKEKLRSLFQNLKQVSNTQLRKRVMSGDIEPARFVVMTHEEL 228
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DY 292
S++++ + L+ + V ++ K I SD CG+C K+SY + D
Sbjct: 229 KSEEMKKKDDLLEMENM----KKAQVPMAEKSI-SDALTCGKCHQKKVSYSQAQTRSADE 283
Query: 293 NLTRHVTCLNCNQYW 307
+T C C W
Sbjct: 284 PMTTFCECQVCGHRW 298
>gi|149734279|ref|XP_001491643.1| PREDICTED: death-inducer obliterator 1 [Equus caballus]
Length = 2272
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 8/116 (6%)
Query: 134 NDSFREIVREKLYDAL-SKVSDEAADKVTIDLVKACDPI-QVAILVESAMYEKWCRSNGM 191
N R+ +R L + L +VSD + DL+ + + ++A+ +E M+ + ++
Sbjct: 670 NSQIRQNIRRSLKEILWKRVSD------SDDLIMTENEVGKIALHIEKEMFNLFRVTDNR 723
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
YK KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ +W K
Sbjct: 724 YKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWKERPTK 779
>gi|431894600|gb|ELK04400.1| Death-inducer obliterator 1 [Pteropus alecto]
Length = 1849
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K ++ D + + + +VA+ +E ++ + ++ YK
Sbjct: 632 NSQIRQNIRRSLKEILWKRVSDSDDLIMTE----SEVGRVALRIEKELFNLFRVTDNRYK 687
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR L+FN+ DP+NQ +VL + ++ M +E+ S ++ +W
Sbjct: 688 SKYRSLMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVW 735
>gi|259146459|emb|CAY79716.1| Dst1p [Saccharomyces cerevisiae EC1118]
Length = 309
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 18/166 (10%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSN-GMYKFKYRCLLFN 202
LYD L+K S+ + + A +ES M + C +N YK +YR + N
Sbjct: 156 LYDVLAKESEHPPQSI----------LHTAKAIESEMNKVNNCDTNEAAYKARYRIIYSN 205
Query: 203 ISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLS 262
+ N D + K+ G + PE + AK++A ++ + K L G +
Sbjct: 206 VISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQN-LYNAQ----GAT 260
Query: 263 RKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+ V+D + CG+C K+S YQ + D LT TC C W
Sbjct: 261 IERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306
>gi|195055893|ref|XP_001994847.1| GH13879 [Drosophila grimshawi]
gi|193892610|gb|EDV91476.1| GH13879 [Drosophila grimshawi]
Length = 2061
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 96 KKAKLVENVKVEE---VTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKV 152
KK K+V + + +T R S + P+ I+ N R ++E+L + +
Sbjct: 1262 KKEKVVAKTPITQRRTLTKSSTERSGSKSQPEP-----IRLN--IRRTLKEQLLARIKEA 1314
Query: 153 SDE--AADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YKFKYRCLLFNISDPENQ 209
D AAD+ + A + VES MY + R G YK KYR L+FNI D +N+
Sbjct: 1315 QDADLAADQS--QWLTASEVENFVKRVESEMYHSFGRDVGAKYKSKYRSLIFNIRDRKNK 1372
Query: 210 DFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHHLD 246
K+ V+P+ ++ M+ E+AS ++ W H LD
Sbjct: 1373 TLFEKICAKQVEPKQLVRMTPSELASQELAKWREEENRHQLD 1414
>gi|354472422|ref|XP_003498438.1| PREDICTED: SPOC domain-containing protein 1-like [Cricetulus
griseus]
Length = 971
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
+E+A++ +N YK KYR LLFN+ DP N D KV V P+ ++ MS+ ++A
Sbjct: 392 IEAALFHLTQDTNLRYKTKYRSLLFNLKDPRNSDLILKVAQCDVSPQDLVQMSSIQLAPK 451
Query: 237 KIQLWNHHLDKDG 249
++ W ++ G
Sbjct: 452 ELSRWRDQEERRG 464
>gi|443915704|gb|ELU37060.1| transcription factor s-II (TFIIS), central domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 377
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 13/180 (7%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
D R+ E LYDA++ SD A + T ++ ++ +E +Y+++ Y
Sbjct: 169 GDKTRDKCMELLYDAMA--SDSGARESTHLII-----LKRVYAIEYQVYKEFDGVTKEYS 221
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
K R L N+ D +N R V+ G + E + M+ +EMAS++ + N L++
Sbjct: 222 TKMRRLFNNLKDKKNPGLREAVVSGDISAEKFVKMTPEEMASEERKQQNSALNEANVHAA 281
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYWVSTNL 312
+G +D ++CGRC + K Y+ + D +T Q +T++
Sbjct: 282 -----LGAGEPEAETDAFQCGRCKNFKTRYRQAQTRSADEPMTLTFNIFPAAQSVATTSI 336
>gi|37359898|dbj|BAC97927.1| mKIAA0333 protein [Mus musculus]
Length = 1201
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 112 GEERRHDSGNVPKKSIS---------CMIKCNDSFREIVREKLYDALSKVSDEAADKVTI 162
G R+ S NVP S + + N R+ +R L + L K +++ D +
Sbjct: 651 GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMT 710
Query: 163 DLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKP 222
+ + ++A+ +E M+ + ++ YK KYR ++FN+ DP+NQ +VL +
Sbjct: 711 E----NEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISL 766
Query: 223 ETIINMSAKEMASDKIQLW 241
++ M +E+ S ++ +W
Sbjct: 767 AKLVRMKPEELVSKELSMW 785
>gi|242060932|ref|XP_002451755.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
gi|241931586|gb|EES04731.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
Length = 1087
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E +++ + N YK K R LLFN+ D N + R +VL G + PE + +M+A+E
Sbjct: 341 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAEE 400
Query: 233 MASDKIQLW 241
+AS ++ W
Sbjct: 401 LASKELSEW 409
>gi|413926158|gb|AFW66090.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1080
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E +++ + N YK K R LLFN+ D N + R +VL G + PE + +M+A+E
Sbjct: 339 LAFRIEEELFKLFRGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAEE 398
Query: 233 MASDKIQLW 241
+AS ++ W
Sbjct: 399 LASKELSEW 407
>gi|357139063|ref|XP_003571105.1| PREDICTED: uncharacterized protein LOC100836963 [Brachypodium
distachyon]
Length = 1244
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQ----VAILVESAMYEKWCRSNGMYKFKY 196
V E L ++ SK ++AD+ +D V + IQ +A+ +E +++ + N YK +
Sbjct: 316 VTESLAESGSK-RMKSADEAAMD-VDSNSIIQKAESLALRIEEELFKLFGGVNKKYKERG 373
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
R LLFN+ D N + R +VL G + PE + +M+A+E+AS ++ W
Sbjct: 374 RSLLFNLKDKSNPELRVRVLSGDIAPERLCSMTAEELASKELSEW 418
>gi|344248661|gb|EGW04765.1| Transcription elongation factor A protein 3 [Cricetulus griseus]
Length = 138
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 176 LVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMAS 235
L ++ +Y++ ++ Y+ + R + N+ DP N RR VL G + P I M+A+EMAS
Sbjct: 6 LTQTHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMAS 65
Query: 236 DKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQH 285
D+++ + + ++ A+ + G + +D+ C +C +Y
Sbjct: 66 DELRELRNAMTQE-AIREHQMAKTGGT----TTDLLRCSKCKKKNCTYNQ 110
>gi|196008633|ref|XP_002114182.1| predicted protein [Trichoplax adhaerens]
gi|190583201|gb|EDV23272.1| predicted protein [Trichoplax adhaerens]
Length = 996
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL 200
VRE +Y A + + A+K+ I + +++ +E ++ + + YK KYR L
Sbjct: 503 VRENIYKAFRDILSKVAEKIAIQMSVVS---KLSKDIEEQLFNLFNDTGSRYKNKYRSLS 559
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
FN+ D +N+ ++L G + P ++ M+++E+A+ ++ W
Sbjct: 560 FNLKDEKNKALVERILHGDISPSKLVRMTSEELANKELAQW 600
>gi|51571541|ref|NP_808520.2| death-inducer obliterator 1 isoform 2 [Mus musculus]
gi|187951163|gb|AAI38714.1| Death inducer-obliterator 1 [Mus musculus]
gi|187952021|gb|AAI38713.1| Death inducer-obliterator 1 [Mus musculus]
Length = 1183
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 13/139 (9%)
Query: 112 GEERRHDSGNVPKKSIS---------CMIKCNDSFREIVREKLYDALSKVSDEAADKVTI 162
G R+ S NVP S + + N R+ +R L + L K +++ D +
Sbjct: 633 GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMT 692
Query: 163 DLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKP 222
+ + ++A+ +E M+ + ++ YK KYR ++FN+ DP+NQ +VL +
Sbjct: 693 E----NEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISL 748
Query: 223 ETIINMSAKEMASDKIQLW 241
++ M +E+ S ++ +W
Sbjct: 749 AKLVRMKPEELVSKELSMW 767
>gi|357466369|ref|XP_003603469.1| Transcription elongation factor A protein [Medicago truncatula]
gi|355492517|gb|AES73720.1| Transcription elongation factor A protein [Medicago truncatula]
Length = 1132
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
P +A +E+ +++ + N YK K R LLFN+ D N + R +V+ G + PE + +M+
Sbjct: 393 PELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKILPEQLCSMT 452
Query: 230 AKEMASDKIQLW 241
A+E+AS ++ W
Sbjct: 453 AEELASKELSEW 464
>gi|156082914|ref|XP_001608941.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia bovis
T2Bo]
gi|154796191|gb|EDO05373.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia
bovis]
Length = 302
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 172 QVAILVESAMYEKWCRSNGM---YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
++A +E+ ++ ++ + Y K + + FN+ DP+N F K+ G ++P ++ M
Sbjct: 158 RLAYDMEAGLFSRYLYNQNNQKDYTLKLKSIAFNLKDPKNSTFSDKIYNGDIEPRSVAIM 217
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVG---LSRKIIVSDIYECGRC-GHNKISYQ 284
A EMAS++ ++ ++ ++ + V LS++ ++C +C + YQ
Sbjct: 218 EAAEMASEEKKMERINILQESLEACQSDWAVKNILLSKEGKKKGQFKCLKCHSMETVYYQ 277
Query: 285 HSSILDDYNLTRHVTCLNCNQYW 307
+ D +T VTCL CN W
Sbjct: 278 LQTRSSDEPMTTFVTCLECNNRW 300
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 119 SGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVE 178
SG P +S + N R+ +R L + L K +++ D + + + ++A+ +E
Sbjct: 693 SGASPSQS-----QPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIE 743
Query: 179 SAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
M+ + ++ YK KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++
Sbjct: 744 KEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKEL 803
Query: 239 QLW 241
W
Sbjct: 804 STW 806
>gi|320582848|gb|EFW97065.1| General transcription elongation factor TFIIS [Ogataea
parapolymorpha DL-1]
Length = 294
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 29/171 (16%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW-CRSNGMYKFKYRCLLFNI 203
LY AL+ SD+ ++ + +A +E+ ++ + + Y+ K R L+ N+
Sbjct: 142 LYTALAMTSDKLPSEIVL----------IAQEIEAEAFKLTDSKVSDQYRNKMRSLIMNL 191
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASD--KIQLWNHH----LDKDGALVTGHIF 257
+ N + R ++L +K + M+ +E+A + K +L + H D GA+
Sbjct: 192 RNKNNPELRARLLSREIKSSKFVTMTNQELAPEALKKELADLHQKNLFDAQGAV------ 245
Query: 258 PVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+K ++D + CG+C ++S YQ + D LT TC +C W
Sbjct: 246 -----QKRAITDRFVCGKCNKREVSYYQMQTRSADEPLTTFCTCESCGNRW 291
>gi|449299188|gb|EMC95202.1| hypothetical protein BAUCODRAFT_530419 [Baudoinia compniacensis
UAMH 10762]
Length = 311
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSNGMYKFKYRCLLFNI 203
+Y+ L+ +S+E+ D+V + A VE+A + ++ YK K R L N+
Sbjct: 159 IYNGLAYMSEESPDEVLV----------AARSVEAAAFSVHNNETSSAYKMKMRSLFQNL 208
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSR 263
N RR V G ++P+ + M++ E+ + + + + L+K+ + +
Sbjct: 209 KMKGNATLRRDVFNGKIEPKRFVTMTSDELKNAEKRAQDAALEKENMKAS-----MTAQE 263
Query: 264 KIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ +S C +C ++++Y Q + D +T C NC W
Sbjct: 264 EKAISTTMTCNKCKQSRVAYTQAQTRSADEPMTTFCECTNCGNRW 308
>gi|325053992|pdb|3PO3|S Chain S, Arrested Rna Polymerase Ii Reactivation Intermediate
Length = 178
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 18/174 (10%)
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSN-GMYKF 194
R+ V + LYD L+K S+ + + A +ES M + C +N YK
Sbjct: 17 LRDQVLKALYDVLAKESEHPPQSI----------LHTAKAIESEMNKVNNCDTNEAAYKA 66
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+YR + N+ N D + K+ G + PE + AK++A ++ + K L
Sbjct: 67 RYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQN-LYNA 125
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
G + + V+D + CG+C K+S YQ + LT TC C W
Sbjct: 126 Q----GATIERSVTDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRW 175
>gi|413936812|gb|AFW71363.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1082
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E +++ + N YK K R LLFN+ D N + R +VL G + PE + +M+A+E
Sbjct: 344 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIVPERLCSMTAEE 403
Query: 233 MASDKIQLW 241
+AS ++ W
Sbjct: 404 LASKELSEW 412
>gi|195391634|ref|XP_002054465.1| GJ24469 [Drosophila virilis]
gi|194152551|gb|EDW67985.1| GJ24469 [Drosophila virilis]
Length = 2055
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
Query: 138 REIVREKLYDALSKVSDEAADKVTI---DLVKACDPIQVAILVESAMYEKWCRS-NGMYK 193
R ++E+L LS++ + A ++ D + A + VES MY + R + YK
Sbjct: 1310 RRTLKEQL---LSRIKEAQAAELPTEKSDWLTAAEVENFVKRVESEMYHSFGRDVSAKYK 1366
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHHLD 246
KYR L+FNI D +N+ K+ V+P+ ++ M+ E+AS ++ W H LD
Sbjct: 1367 SKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELASQELAKWREEENRHQLD 1424
>gi|395829525|ref|XP_003787906.1| PREDICTED: death-inducer obliterator 1 [Otolemur garnettii]
Length = 2230
Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 670 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 725
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ W
Sbjct: 726 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTW 773
>gi|339245691|ref|XP_003374479.1| transcription elongation factor S-II [Trichinella spiralis]
gi|316972266|gb|EFV55949.1| transcription elongation factor S-II [Trichinella spiralis]
Length = 347
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Query: 172 QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAK 231
++A +E +Y + + Y R +FN+ D +N D +R VL G + + M+++
Sbjct: 213 RLAAEIEQEIYSLFNNTGDRYCACVRSRVFNLRDKKNPDLKRSVLSGEITAIRLATMTSE 272
Query: 232 EMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILD 290
EMAS+ ++ K+ VG +D+++CG+C +Y Q +
Sbjct: 273 EMASEALKAARRKFTKEAIEEHQVAQEVGTP-----TDMFKCGKCHKKNCTYTQAQTRSA 327
Query: 291 DYNLTRHVTCLNCNQYW 307
D +T V C C W
Sbjct: 328 DEPMTTFVYCRECGNRW 344
>gi|403282553|ref|XP_003932709.1| PREDICTED: death-inducer obliterator 1 [Saimiri boliviensis
boliviensis]
Length = 2234
Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 666 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFHVTDNRYK 721
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ W
Sbjct: 722 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTW 769
>gi|219120375|ref|XP_002180927.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407643|gb|EEC47579.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 323
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 128/301 (42%), Gaps = 32/301 (10%)
Query: 30 RCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDV 89
R D L + +T ++L T + + + + HP+ + A L+ W+ + +
Sbjct: 30 RVHDVLQALDRCEMTLEILSDTMIGKIVSQLKSHPT--LNTTAKALVKKWKQVAKHTSET 87
Query: 90 EYVAVTKKAKLVENV----------KVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFRE 139
+ T + + K E+ T+ ERR N P + + R+
Sbjct: 88 NSHSNTTPGRPALSSSSLSVSPSVNKPEKQTS--ERRDSRVNSPPAAADLEWQGLAPMRQ 145
Query: 140 IVREKLYDALSKVSDEAADKVTIDLVKACDPI--QVAILVESAMYEKWCRSNGMYKFKYR 197
+ +K Y+ L ++ A + ++ A D + A+ +E+++ EK+ R Y K R
Sbjct: 146 NICKKFYELLL-LAKPALTEAGVN-TDAVDHLIGPRAVEIEASLTEKF-RDRKGYTDKAR 202
Query: 198 CLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ----------LWNHHLDK 247
L FN+ +NQ ++V+LG V +++ +++++AS + + + + LD
Sbjct: 203 SLAFNLK--KNQSLCQEVILGQVSASELVSFTSEQLASAETRQARATEAKKLIDSRRLDW 260
Query: 248 DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNK-ISYQHSSILDDYNLTRHVTCLNCNQY 306
D A G+ ++ + ++ CGRC K S Q + D +T V CLNC
Sbjct: 261 DQANEDKINEMCGIKGDLLNASLFTCGRCKSVKTTSTQKQTRSADEPMTVFVLCLNCGNR 320
Query: 307 W 307
W
Sbjct: 321 W 321
>gi|321468633|gb|EFX79617.1| hypothetical protein DAPPUDRAFT_244816 [Daphnia pulex]
Length = 2274
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YK 193
++ R I R L +AL EA D T + + QVA +E +++ + G YK
Sbjct: 1706 EATRSISRSSLKEALWSRCKEANDVETDEAIVE----QVAKEIEESLFSLYKHDVGSKYK 1761
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHHLD 246
KYR L+FNI DP+N R+++ + P+ ++ MS +++A+ + W H LD
Sbjct: 1762 NKYRSLIFNIKDPKNPGLFREIITKQLLPDELVKMSTEDLANKDLAEWREKEAKHQLD 1819
>gi|320588310|gb|EFX00779.1| transcription elongation factor s 2 [Grosmannia clavigera kw1407]
Length = 332
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNIS 204
LY+ L+ S E ++V + AI VE A + + Y+ K R L N+
Sbjct: 181 LYNGLAFRSTELPERV----------LAKAIEVEKAAFVVYKGETAEYRAKLRSLFQNLK 230
Query: 205 DPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRK 264
+ N R+V+ G + + + MS+ E+ S ++ L K+ V ++ K
Sbjct: 231 NRSNPALGRRVVAGEIAADAFVVMSSDELKSAHLKQLESDLQKENM----KKAQVPMTEK 286
Query: 265 IIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
I SD CG+C K+SY Q + D +T C C W
Sbjct: 287 SI-SDALTCGKCKQRKVSYTQAQTRSADEPMTTFCECTVCGHRW 329
>gi|198432582|ref|XP_002121512.1| PREDICTED: similar to death inducer-obliterator 1 [Ciona
intestinalis]
Length = 1728
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILV---ESAMYEKWCRSNGMYK 193
R V++ + LSK S+E+ D P + LV E ++++ + +N YK
Sbjct: 772 IRHNVKKSILGILSKRSEESEDL-------RMHPSSITRLVDKIEDSLHKLFGETNVKYK 824
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHH 244
+YR ++FN+ D N RKV++G V ++ M+A++MAS K+ W +
Sbjct: 825 NRYRSIMFNLKDERNHGLWRKVIIGDVTTSELVQMTAEQMASKKLAEWRQN 875
>gi|327271898|ref|XP_003220724.1| PREDICTED: death-inducer obliterator 1-like [Anolis carolinensis]
Length = 2331
Score = 53.9 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D V + + ++A+ +E M+ + ++ YK
Sbjct: 829 NSQIRQNIRRSLKEILWKRVNDSDDLVMTE----SEVGKIALNIEKEMFNLFHATDNRYK 884
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ +W
Sbjct: 885 SKYRSIMFNLKDPKNQGLFHRVLREDLPLSRLVRMKPEELLSKELSVW 932
>gi|440800297|gb|ELR21336.1| transcription factor sii (tfiis), central domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 653
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 133 CNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW----CRS 188
C+++ R VRE++ +L++ + D V L E E W ++
Sbjct: 225 CDETTR-AVRERVVASLAEALSMPRPATAENERSVVDAAAVQALAEGIETEMWRMFELQT 283
Query: 189 NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
+ YK K+R LLFN+ D NQ+ R VL G + P + ++KE+A ++ W
Sbjct: 284 SSAYKAKFRTLLFNLKDERNQELRESVLSGEMAPAELCKKTSKELAPTELAEW 336
>gi|425781061|gb|EKV19043.1| Transcription elongation factor S-II [Penicillium digitatum PHI26]
gi|425783194|gb|EKV21053.1| Transcription elongation factor S-II [Penicillium digitatum Pd1]
Length = 306
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 165 VKACDPIQV----AILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGH 219
V + +P +V AI VE + Y+ + Y+ K R L N+ + N R +V+ G
Sbjct: 161 VGSTEPPKVILSRAIAVEISAYKYLGPETKEEYRTKIRSLFQNLKNKSNPKLRVRVVEGE 220
Query: 220 VKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDIYECGRC 276
+ + + MS E+ S + + + + K D A+V ++ +S +CG+C
Sbjct: 221 ITSDQFVRMSHDELRSVEQREADAKIQKENMDKAMVA--------QQERSISKSLQCGKC 272
Query: 277 GHNKISYQHSSI-LDDYNLTRHVTCLNCNQYW 307
G K++Y + D +T TCLNC + W
Sbjct: 273 GQRKVTYTEAQTRAADEPMTLFCTCLNCGKSW 304
>gi|310789962|gb|EFQ25495.1| transcription elongation factor S-II [Glomerella graminicola
M1.001]
Length = 302
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 118/288 (40%), Gaps = 46/288 (15%)
Query: 39 KNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA 98
K ++ T ++L S++ + + + ++ I + A +L+ W+
Sbjct: 39 KEAAPTEEMLRSSRAGVFVGKLRSNSNKDIARAATELVHKWK------------------ 80
Query: 99 KLVE---NVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFR---EIVREKLYDALSKV 152
KLVE K+++ ++ + PK S S + N F+ E+ R K +K
Sbjct: 81 KLVEAEKQGKIKKQSSPAAPSPTQASAPKPSSSNAM--NQPFKGNPELRRAKTDGCDTKR 138
Query: 153 SDEAADKVTIDLV------KACDPIQ----VAILVESAMYEKWCRSNGMYKFKYRCLLFN 202
+ + I+L+ ++ PI A+ VE A Y + Y+ K R L N
Sbjct: 139 TGDETRDSCIELIYNGLAYRSTAPINDVLTKAVAVEYAAYIHFKGVTKEYREKLRSLFSN 198
Query: 203 ISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI--FPVG 260
+ N+ V+ G + PE + M+ +E+ SD K+ AL ++ V
Sbjct: 199 LKVKSNRQLGINVMEGKITPERFVVMTHEELKSD------EQRKKEDALQQENMKKAQVP 252
Query: 261 LSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
++ K I SD +CG+CG K+SY + D +T C C W
Sbjct: 253 MAEKSI-SDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRW 299
>gi|301628195|ref|XP_002943243.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 2209
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L L K ++ D V ++ A ++A +E M+ + ++ YK
Sbjct: 627 NMQIRQNIRRSLKQILWKRVIDSDDLVMVENEVA----RIATNIEREMFNLYRDTDSRYK 682
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
KYR ++FN+ DP+NQ +VL + ++ + +E+AS K+ W + G ++
Sbjct: 683 AKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELASRKLSSWKETGSRSGLVL 741
>gi|301628193|ref|XP_002943242.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 2281
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L L K ++ D V ++ A ++A +E M+ + ++ YK
Sbjct: 699 NMQIRQNIRRSLKQILWKRVIDSDDLVMVENEVA----RIATNIEREMFNLYRDTDSRYK 754
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
KYR ++FN+ DP+NQ +VL + ++ + +E+AS K+ W + G ++
Sbjct: 755 AKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELASRKLSSWKETGSRSGLVL 813
>gi|134079343|emb|CAK96972.1| unnamed protein product [Aspergillus niger]
Length = 955
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+++ +ESAMYE C G Y+ + R ++FN+ +N R ++L+G + P+ +
Sbjct: 396 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 453
Query: 228 MSAKEMASDKIQLWNHHLDKD 248
MS ++MAS+++Q + + ++
Sbjct: 454 MSTQDMASEELQQKDAEIKRE 474
>gi|300120236|emb|CBK19790.2| unnamed protein product [Blastocystis hominis]
Length = 285
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 171 IQVAILVESAMYEKWCRSNGM-----YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETI 225
+ +A +E ++Y ++ S Y K R +LFN+SDP+N D R ++ G ++PE +
Sbjct: 1 MDLACRIEQSIYNQFPFSTKFNLKESYNAKLRNILFNLSDPKNPDLRNRIFSGELEPERL 60
Query: 226 INMSAKEMASDKIQLW 241
M+ EMAS +++ W
Sbjct: 61 PIMTNDEMASSEMRKW 76
>gi|261203309|ref|XP_002628868.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239586653|gb|EEQ69296.1| transcription elongation factor S-II [Ajellomyces dermatitidis
SLH14081]
gi|239608307|gb|EEQ85294.1| transcription elongation factor S-II [Ajellomyces dermatitidis
ER-3]
Length = 303
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 17/144 (11%)
Query: 171 IQVAILVESAMYEKWC---RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
+Q AI VE A Y C + Y+ K R L N+ + N R +VL V E +
Sbjct: 168 LQKAIEVELAAYT--CLGPETKEQYRTKMRSLFQNLKNKSNPGLRVRVLSNEVTAEKFVR 225
Query: 228 MSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQ 284
M+ E+ SD + + K D A+V V S +CG+CG K++Y
Sbjct: 226 MTHDELKSDAQREEERRIHKENMDKAMVAKAERSVSTS--------LQCGKCGQRKVTYT 277
Query: 285 HSSILD-DYNLTRHVTCLNCNQYW 307
+ D +T TC C + W
Sbjct: 278 EAQTRSADEPMTLFCTCTVCGKSW 301
>gi|431891278|gb|ELK02155.1| Zinc finger protein 436 [Pteropus alecto]
Length = 622
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y+ + R + N+ DP N RR VL G + E I M+A+EMASD+++ + + ++ A+
Sbjct: 3 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAELIAKMTAEEMASDELRELRNAMTQE-AI 61
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 62 REHQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 114
>gi|350631410|gb|EHA19781.1| hypothetical protein ASPNIDRAFT_119842 [Aspergillus niger ATCC
1015]
Length = 891
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+++ +ESAMYE C G Y+ + R ++FN+ +N R ++L+G + P+ +
Sbjct: 332 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 389
Query: 228 MSAKEMASDKIQLWNHHLDKD 248
MS ++MAS+++Q + + ++
Sbjct: 390 MSTQDMASEELQQKDAEIKRE 410
>gi|332262279|ref|XP_003280189.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Nomascus
leucogenys]
gi|332262281|ref|XP_003280190.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Nomascus
leucogenys]
Length = 2236
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D L+ + +VA+ +E M+ + ++ YK
Sbjct: 663 NSQIRQNIRRSLKEILWKRVNDSDDL----LMTENEVGKVALHIEKEMFNLFQVTDNRYK 718
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 719 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 766
>gi|317032975|ref|XP_001394653.2| PHD finger domain protein [Aspergillus niger CBS 513.88]
Length = 903
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+++ +ESAMYE C G Y+ + R ++FN+ +N R ++L+G + P+ +
Sbjct: 344 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 401
Query: 228 MSAKEMASDKIQ 239
MS ++MAS+++Q
Sbjct: 402 MSTQDMASEELQ 413
>gi|328861258|gb|EGG10362.1| hypothetical protein MELLADRAFT_33850 [Melampsora larici-populina
98AG31]
Length = 264
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
D R+ + ++DAL SD AD V + A +ES + + SNG YK
Sbjct: 102 DKVRDGSMKSVFDALIFDSDAPADLV----------YERAKSIESEV-NRTNDSNG-YKN 149
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
K R L+FN+ D N R V+ G + + +M +MAS++ + +D L
Sbjct: 150 KMRSLIFNLKDKNNPGLREAVVSGEISSMKLCSMGPADMASEERKA------QDRKLAEE 203
Query: 255 HIFPV-GLSRKIIVSDIYECGRCGHNKISY 283
++F G + +D + CGRCG K +Y
Sbjct: 204 NLFKARGAGPQQAETDAFRCGRCGQRKCTY 233
>gi|403220912|dbj|BAM39045.1| transcription elongation factor [Theileria orientalis strain
Shintoku]
Length = 319
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 9/138 (6%)
Query: 177 VESAMYEKWC---RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
+E+A+Y+ + + Y + +C+ FN D +N F KV G + ++ MS+ +M
Sbjct: 182 IENALYDHYVVNKNAQKEYNLQLKCISFNFKDIKNTFFNYKVYSGAIPVSELVTMSSLQM 241
Query: 234 ASDKIQLWNHHL---DKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSIL 289
ASD+ ++ + + I + L++K ++CG+C + + YQ +
Sbjct: 242 ASDEKKMQRSVILEQSLEACQSDWAIKNIFLNQK--SKGQFKCGKCNSRQTTYYQLQTRS 299
Query: 290 DDYNLTRHVTCLNCNQYW 307
D +T VTCLNC W
Sbjct: 300 SDEPMTTFVTCLNCKNRW 317
>gi|195385615|ref|XP_002051500.1| TfIIS [Drosophila virilis]
gi|194147957|gb|EDW63655.1| TfIIS [Drosophila virilis]
Length = 324
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
+Y ++ ++ YK + R + N+ DP+N R + G V + + M+ +EMASD+++
Sbjct: 199 IYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEMKK 258
Query: 241 WNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVT 299
K+ A+ + V ++ +D+ +CG+C +Y Q + D +T V
Sbjct: 259 LREKFVKE-AINDAQLATVQGTK----TDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVM 313
Query: 300 CLNCNQYW 307
C C W
Sbjct: 314 CNECGNRW 321
>gi|159481668|ref|XP_001698900.1| hypothetical protein CHLREDRAFT_159323 [Chlamydomonas reinhardtii]
gi|158273392|gb|EDO99182.1| predicted protein [Chlamydomonas reinhardtii]
Length = 229
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 17/151 (11%)
Query: 169 DPIQVAILVESAMYEKWCRSNGM-YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
D +A +E+A++ G YK R L+ ++ N D R +V+ G V P ++
Sbjct: 79 DVTGLAEDIEAALFHHHGSKPGPEYKAAARLLVASLK--RNADLRGQVVSGAVDPAALVA 136
Query: 228 MSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSS 287
M ++++A+ + Q HL KD AL + VG ++ Y C +CG N +Y S
Sbjct: 137 MDSRQLATSQQQQEFAHL-KDKALQ--RVTVVGSGASGTLTTEYACKKCGGNNCNYIESG 193
Query: 288 ILD-----------DYNLTRHVTCLNCNQYW 307
D R VTCL C W
Sbjct: 194 RRDIGKSETWGSKEGATTNRVVTCLGCGHRW 224
>gi|402882034|ref|XP_003904560.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Papio anubis]
gi|402882036|ref|XP_003904561.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Papio anubis]
Length = 2239
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 134 NDSFREIVREKLYDAL-SKVSDEAADKVTIDLVKACDPI-QVAILVESAMYEKWCRSNGM 191
N R+ +R L + L +VSD + DL+ + + ++A+ +E M+ + ++
Sbjct: 664 NSQIRQNIRRSLKEILWKRVSD------SDDLIMTENEVGKIALHIEKEMFNLFQVTDNR 717
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YK KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 718 YKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 767
>gi|8050580|gb|AAF71710.1|AF220261_1 transcription elongation factor TFIIS [Drosophila virilis]
Length = 324
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
+Y ++ ++ YK + R + N+ DP+N R + G V + + M+ +EMASD+++
Sbjct: 199 IYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEMKK 258
Query: 241 WNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVT 299
K+ A+ + V ++ +D+ +CG+C +Y Q + D +T V
Sbjct: 259 LREKFVKE-AINDAQLATVQGTK----TDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVM 313
Query: 300 CLNCNQYW 307
C C W
Sbjct: 314 CNECGNRW 321
>gi|91084035|ref|XP_966732.1| PREDICTED: similar to transcription elongation factor S-II
[Tribolium castaneum]
gi|270008004|gb|EFA04452.1| hypothetical protein TcasGA2_TC014756 [Tribolium castaneum]
Length = 294
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 125/283 (44%), Gaps = 19/283 (6%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQ-KIQKLAYDLISSWRDMCWDV 86
+ + +D L Q++ +I ++L T++ + + K ++ L+ LI +W+
Sbjct: 25 QEQALDLLKQLQTLNINLEVLTKTRIGMTVNALRKSSKDDEVISLSKTLIKNWKKF-LSG 83
Query: 87 EDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLY 146
+ + + T +K + K E+ + ++ R +P + D+ R RE L
Sbjct: 84 SNAKETSSTSTSKPKRD-KEEKSSREDKDRDKEKKLPNQFPPSSSNTTDAVRLKCREMLA 142
Query: 147 DALSKVSDEAADKVTIDLVKAC-DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISD 205
AA + + + C P +A +E A+++++ ++ YK + R + N+ D
Sbjct: 143 ---------AAIRCDTEEFEGCASPEDLAEELEEAIFQEFKNTDMRYKNRVRSRIANLKD 193
Query: 206 PENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKI 265
+N + R +G + + M+A+EMA+D+I+ K+ A+ + V ++
Sbjct: 194 VKNPNLRTNFRIGAIPASRLAVMTAEEMANDEIKQLRERFTKE-AINDAQLATVQGTK-- 250
Query: 266 IVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+D+ +CG+C +Y Q + D +T V C C W
Sbjct: 251 --TDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 291
>gi|28204843|gb|AAH44755.1| Dido1 protein [Mus musculus]
Length = 643
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 112 GEERRHDSGNVPKKSIS---------CMIKCNDSFREIVREKLYDAL-SKVSDEAADKVT 161
G R+ S NVP S + + N R+ +R L + L +V+D +
Sbjct: 93 GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRRSLKEILWKRVND------S 146
Query: 162 IDLVKACDPI-QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHV 220
DL+ + + ++A+ +E M+ + ++ YK KYR ++FN+ DP+NQ +VL +
Sbjct: 147 DDLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEI 206
Query: 221 KPETIINMSAKEMASDKIQLWNHHLDK 247
++ M +E+ S ++ +W K
Sbjct: 207 SLAKLVRMKPEELVSKELSMWTEKPTK 233
>gi|380476055|emb|CCF44922.1| transcription elongation factor S-II [Colletotrichum higginsianum]
Length = 302
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 34/282 (12%)
Query: 39 KNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVTKKA 98
K ++ T ++L S++ + + + +++I + A +L+ W+ + + E KK
Sbjct: 39 KEAAPTEEMLRSSRAGVFVGKLRSNSNKEIARAATELVHKWKKLV----EAEKQGKIKKQ 94
Query: 99 KLVENVKVEEVTNGEERRHDSGNVP---------KKSISCMIK-CNDSFREIVREKLYDA 148
+ + ++ N P KS C K D R+ E +Y+
Sbjct: 95 SSPAAPSPTQAPAPKPSSSNAMNQPFKGNPELRRAKSDGCDTKRTGDETRDSCIELIYNG 154
Query: 149 LSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPEN 208
L+ S + VT L KA + VE A + + Y+ K R L N+ N
Sbjct: 155 LAYRSTAS---VTDVLAKA-------VAVEHAAFSHYKGVTKEYREKLRSLFSNLKVKSN 204
Query: 209 QDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI--FPVGLSRKII 266
+ V+ G + PE + M+ +E+ S+ K+ AL ++ V ++ K I
Sbjct: 205 RQLGVNVMEGKIAPERFVVMTHEELKSE------EQRKKEDALQLENMKKAQVPMAEKSI 258
Query: 267 VSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
SD +CG+CG K+SY + D +T C C W
Sbjct: 259 -SDALKCGKCGQKKVSYSQAQTRSADEPMTTFCECTVCGNRW 299
>gi|195437119|ref|XP_002066492.1| GK18066 [Drosophila willistoni]
gi|194162577|gb|EDW77478.1| GK18066 [Drosophila willistoni]
Length = 319
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
+Y ++ ++ YK + R + N+ DP+N R + G V + + M+ +EMASD+++
Sbjct: 194 IYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKK 253
Query: 241 WNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVT 299
K+ A+ + V ++ +D+ +CG+C +Y Q + D +T V
Sbjct: 254 LREKFVKE-AINDAQLATVQGTK----TDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVM 308
Query: 300 CLNCNQYW 307
C C W
Sbjct: 309 CNECGNRW 316
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E ++ + ++ YK
Sbjct: 915 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKELFNLFHVTDNRYK 970
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ +W K
Sbjct: 971 SKYRSIMFNLKDPKNQGLFHRVLREEIPLSKLVRMKPEELLSKELSVWKERPTK 1024
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y+ + R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 97 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AI 155
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ G + +D+++C +C +Y Q + D +T V C C W
Sbjct: 156 REHQMAKTGGT----TTDLFQCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 208
>gi|407261229|ref|XP_003086425.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 1090
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQ-VAILVESAMYEKWCRSNGMYKFKYRCL 199
VR + A+ +V A ++ DL D ++ +A +E A++ +N YK KYR L
Sbjct: 485 VRSTVVRAMQEVLWTRAQELP-DLALREDEVEAIAEGIEEALFHLTQDTNLRYKNKYRSL 543
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDG 249
LFN+ DP N D KV V P ++ MS+ ++A ++ W ++ G
Sbjct: 544 LFNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQLAPKELSRWRDQEERKG 593
>gi|344245025|gb|EGW01129.1| SPOC domain-containing protein 1 [Cricetulus griseus]
Length = 928
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E+A++ +N YK KYR LLFN+ DP N D KV V P+ ++ MS+ +
Sbjct: 387 IAEDIEAALFHLTQDTNLRYKTKYRSLLFNLKDPRNSDLILKVAQCDVSPQDLVQMSSIQ 446
Query: 233 MASDKIQLWNHHLDKDG 249
+A ++ W ++ G
Sbjct: 447 LAPKELSRWRDQEERRG 463
>gi|119470088|ref|XP_001258016.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
gi|119406168|gb|EAW16119.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
Length = 884
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+ +E AMY+ C +G YK + R +LFN+ +N R ++L+G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 228 MSAKEMASDKIQLWNHHLDKDG 249
MS+++MAS+++Q + + ++
Sbjct: 383 MSSQDMASEELQQKDAEIKREA 404
>gi|121699592|ref|XP_001268072.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
gi|119396214|gb|EAW06646.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
Length = 853
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+ + +E AMY+ C +G YK + R +LFN+ +N R ++L+G + P+ +
Sbjct: 293 QLGLSIEKAMYQNICGGSGEPTEAYKLQLRTVLFNVK--KNPSLRDRLLVGSLLPDKLSQ 350
Query: 228 MSAKEMASDKIQLWNHHLDKDG 249
MS+++MAS+++Q + + ++
Sbjct: 351 MSSQDMASEELQQKDAEIKREA 372
>gi|426392422|ref|XP_004062551.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Gorilla gorilla
gorilla]
gi|426392424|ref|XP_004062552.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 2239
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 666 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 721
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 722 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 769
>gi|44971714|gb|AAS49899.1| death inducer-obliterator-3 [Homo sapiens]
Length = 2240
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 722
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 723 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 770
>gi|410953420|ref|XP_003983369.1| PREDICTED: death-inducer obliterator 1 [Felis catus]
Length = 2093
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E ++ + ++ YK
Sbjct: 666 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKELFNLFQVTDNRYK 721
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ M +E+ S ++ W
Sbjct: 722 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTW 769
>gi|410227672|gb|JAA11055.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410227678|gb|JAA11058.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354253|gb|JAA43730.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 2237
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 722
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 723 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 770
>gi|397479128|ref|XP_003810881.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Pan paniscus]
gi|397479130|ref|XP_003810882.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Pan paniscus]
Length = 2240
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 722
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 723 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 770
>gi|355562965|gb|EHH19527.1| Death-inducer obliterator 1 [Macaca mulatta]
Length = 2238
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 719
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 720 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 767
>gi|297259403|ref|XP_002798112.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Macaca mulatta]
Length = 2250
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 676 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 731
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 732 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 779
>gi|119595730|gb|EAW75324.1| death inducer-obliterator 1, isoform CRA_c [Homo sapiens]
Length = 2276
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 703 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 758
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 759 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 806
>gi|301129165|ref|NP_149072.2| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|301129170|ref|NP_001180298.1| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|116241332|sp|Q9BTC0.5|DIDO1_HUMAN RecName: Full=Death-inducer obliterator 1; Short=DIO-1;
Short=hDido1; AltName: Full=Death-associated
transcription factor 1; Short=DATF-1
Length = 2240
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 722
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 723 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 770
>gi|109091362|ref|XP_001086709.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Macaca mulatta]
Length = 2238
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 719
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 720 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 767
>gi|407263151|ref|XP_003085477.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 843
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 98 AKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAA 157
+L + + E ++R D G M + R V + + L + E
Sbjct: 205 PRLSDPSETENAEPHQQRAEDPGE------QGMTPLDAGVRSTVVRAMQEVLWTRAQELP 258
Query: 158 D-KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVL 216
D + D V+A +A +E A++ +N YK KYR LLFN+ DP N D KV
Sbjct: 259 DLALREDEVEA-----IAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVA 313
Query: 217 LGHVKPETIINMSAKEMASDKIQLWNHHLDKDG 249
V P ++ MS+ ++A ++ W ++ G
Sbjct: 314 HCDVTPNNLVQMSSIQLAPKELSRWRDQEERKG 346
>gi|441637983|ref|XP_004090096.1| PREDICTED: death-inducer obliterator 1 [Nomascus leucogenys]
Length = 1185
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D L+ + +VA+ +E M+ + ++ YK
Sbjct: 663 NSQIRQNIRRSLKEILWKRVNDSDDL----LMTENEVGKVALHIEKEMFNLFQVTDNRYK 718
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 719 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 766
>gi|346321715|gb|EGX91314.1| transcription elongation factor s-ii [Cordyceps militaris CM01]
Length = 303
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK K R L N+ + N+ V+ + PE + M+ ++ SD + L+K+
Sbjct: 189 YKKKIRSLFTNLKNKSNRALGVSVMGSEIPPERFVAMTDDDLKSDDQRKKEIELEKENM- 247
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
V ++ K I SD ECG+C K+SY Q + D +T C+NC W
Sbjct: 248 ---KKAQVPMAEKSI-SDSLECGKCKQKKVSYTQAQTRSADEPMTTFCECMNCGNRW 300
>gi|166796454|gb|AAI59331.1| Unknown (protein for IMAGE:8927043) [Xenopus (Silurana) tropicalis]
Length = 1162
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L L K ++ D V ++ A ++A +E M+ + ++ YK
Sbjct: 614 NMQIRQNIRRSLKQILWKRVIDSDDLVMVENEVA----RIATNIEREMFNLYRDTDSRYK 669
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
KYR ++FN+ DP+NQ +VL + ++ + +E+AS K+ W + G ++
Sbjct: 670 AKYRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELASRKLSSWKETGSRSGLVL 728
>gi|67522641|ref|XP_659381.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|40744797|gb|EAA63953.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|259487122|tpe|CBF85543.1| TPA: PHD finger domain protein, putative (AFU_orthologue;
AFUA_6G09000) [Aspergillus nidulans FGSC A4]
Length = 889
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 7/73 (9%)
Query: 172 QVAILVESAMYEKWCRSNG-----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETII 226
Q+ I VE A+Y+ G YK + R +LFN+ +N R ++L+G + P+ +
Sbjct: 323 QLGISVEEALYQNLMGGGGEATSEAYKIQLRAILFNVK--KNPSLRDRLLVGSLTPDALS 380
Query: 227 NMSAKEMASDKIQ 239
MS++EMAS+++Q
Sbjct: 381 RMSSQEMASEELQ 393
>gi|118791506|ref|XP_319787.3| AGAP009035-PA [Anopheles gambiae str. PEST]
gi|116117634|gb|EAA14772.3| AGAP009035-PA [Anopheles gambiae str. PEST]
Length = 315
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
D+ R RE L +AL +V E + P ++ +E A++ ++ ++ YK
Sbjct: 152 DAVRLKCREMLANAL-RVDGEPPEGCQT-------PEELGEELEEAIFVEFKNTDMRYKN 203
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+ R + N+ DP+N R + G + + + M+++EMASD+++ K+ A+
Sbjct: 204 RVRSRVANLKDPKNPSLRANFVSGAITAQRLAKMTSEEMASDEMKHLRDRFVKE-AINDA 262
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ V ++ +D+ +CG+C +Y Q + D +T V C C W
Sbjct: 263 QLATVQGTK----TDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMCNECGHRW 312
>gi|380807497|gb|AFE75624.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 155
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E +Y++ ++ Y+
Sbjct: 25 GDSVRDKCVEMLSAALK------ADDDYKDYGVNCD--KMASEIEDHIYQELKSTDMKYR 76
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 77 NRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AIRE 135
Query: 254 GHIFPVGLSRKIIVSDIYECGRC 276
+ G + +D+++C +C
Sbjct: 136 HQMAKTGGT----TTDLFQCSKC 154
>gi|194901746|ref|XP_001980412.1| GG18883 [Drosophila erecta]
gi|190652115|gb|EDV49370.1| GG18883 [Drosophila erecta]
Length = 2004
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 141 VREKLYDAL------SKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YK 193
+R L D L ++ ++E + + + A + Q VE M+ + R G YK
Sbjct: 1275 IRRSLRDQLLARIKEAQAAEENSGQAPTQWLTALEVDQFVKSVELEMFNSFGRDVGAKYK 1334
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHHLD 246
KYR L+FNI D +N+ K+ V+P+ ++ M+ +++AS ++ W H LD
Sbjct: 1335 AKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTPEQLASQELAKWREEENRHQLD 1392
>gi|148234998|ref|NP_001088057.1| death inducer-obliterator 1 [Xenopus laevis]
gi|52354786|gb|AAH82851.1| LOC494751 protein [Xenopus laevis]
Length = 2234
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K ++ D V ++ A ++A +E M+ + ++ YK
Sbjct: 631 NMQIRQNIRRSLKEILWKRVIDSDDLVMVENEVA----RIASNIEREMFNLYRDTDSRYK 686
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +++AS K+ W
Sbjct: 687 SKYRNIMFNLKDPKNQGLYHRVLKEEISLAKLVRLKPEDLASKKLSSW 734
>gi|429329053|gb|AFZ80812.1| transcription elongation factor S-II, putative [Babesia equi]
Length = 294
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 34/245 (13%)
Query: 92 VAVTKKAKLVENVKVEE-------VTNGEERRHDSGNVPKKSISCMIKCNDSFRE--IVR 142
V +TK +K VENV + + N +E +G+ P K + S RE +
Sbjct: 53 VVLTKLSKKVENVSKDTFDRVNGLIKNWKEALKSTGSTPSKRQKTEHTDSSSPREPPVSA 112
Query: 143 EKLYDALSKVSDEAADKVTIDLVKA------CDPIQVAIL------VESAMYEKW-CRSN 189
E Y + +DE +K L K+ C+P +A+L +E +Y + R N
Sbjct: 113 ETPYSG-ALYNDEMRNKALRYLFKSFVSGHSCNP-DIAVLNKLVYDIEGELYTHYITRLN 170
Query: 190 GM--YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
Y + + + FN+ DP N+ F ++ G + ++ M + +MASD+ +L +++ +
Sbjct: 171 AQKEYNLQLKSIGFNLKDPNNKSFNDRIYKGEINSLDLVTMKSIDMASDEKKLQRNNILQ 230
Query: 248 DGALVTGHIFPVGLSRKIIVSD----IYECGRC-GHNKISYQHSSILDDYNLTRHVTCLN 302
+ + V + I +++ + C +C + + +Q + D +T VTCL
Sbjct: 231 ESLQACQSDWAV---KNIFLNNKSKGQFRCFKCKSSDTVYHQMQTRSSDEPMTTFVTCLK 287
Query: 303 CNQYW 307
C W
Sbjct: 288 CQNRW 292
>gi|407264578|ref|XP_003945793.1| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 883
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 98 AKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAA 157
+L + + E ++R D G M + R V + + L + E
Sbjct: 245 PRLSDPSETENAEPHQQRAEDPGE------QGMTPLDAGVRSTVVRAMQEVLWTRAQELP 298
Query: 158 D-KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVL 216
D + D V+A +A +E A++ +N YK KYR LLFN+ DP N D KV
Sbjct: 299 DLALREDEVEA-----IAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVA 353
Query: 217 LGHVKPETIINMSAKEMASDKIQLWNHHLDKDG 249
V P ++ MS+ ++A ++ W ++ G
Sbjct: 354 HCDVTPNNLVQMSSIQLAPKELSRWRDQEERKG 386
>gi|255939243|ref|XP_002560391.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585013|emb|CAP83061.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 306
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 165 VKACDPIQV----AILVESAMYEKWC-RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGH 219
V + +P +V AI VE + Y+ + Y+ K R L N+ + N R +V+ G
Sbjct: 161 VGSTEPPKVVLSRAIAVEVSAYKYLGPETKEEYRTKIRSLFQNLKNKSNPKLRVRVIEGE 220
Query: 220 VKPETIINMSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDIYECGRC 276
+ + + MS E+ S + + + + K D A+V ++ +S +CG+C
Sbjct: 221 ITADQFVRMSHDELRSVEQREADAKIQKENMDKAMVA--------QQERSISKSLQCGKC 272
Query: 277 GHNKISYQHSSI-LDDYNLTRHVTCLNCNQYW 307
G K++Y + D +T TCL+C + W
Sbjct: 273 GQRKVTYTEAQTRAADEPMTLFCTCLHCGKSW 304
>gi|58257648|dbj|BAA20791.2| KIAA0333 [Homo sapiens]
Length = 1223
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 701 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 756
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 757 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 804
>gi|330796078|ref|XP_003286096.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
gi|325083915|gb|EGC37355.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
Length = 310
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKP-ETIINM 228
P VA VE+ +Y + YK K R FN+ ++ D R LL + E +M
Sbjct: 176 PEDVATEVEAELYSIYKGLTADYKNKVRSFKFNL---QSNDGLRDSLLNRILTIEKFCSM 232
Query: 229 SAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSS 287
MASD+++ LDK +G + + +D ++CG+C + +Y Q +
Sbjct: 233 DVMSMASDELKEERRKLDK----FQTEASMIGTNNE-ATTDQFQCGKCKQRRCTYFQMQT 287
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T V C+NC W
Sbjct: 288 RSADEPMTTFVRCINCGNRW 307
>gi|40287880|gb|AAR84050.1| death inducer-obliterator-3 [Mus musculus]
Length = 2256
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 112 GEERRHDSGNVPKKSIS---------CMIKCNDSFREIVREKLYDAL-SKVSDEAADKVT 161
G R+ S NVP S + + N R+ +R L + L +V+D +T
Sbjct: 633 GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDYLIMT 692
Query: 162 IDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVK 221
+ V ++A+ +E M+ + ++ +K KYR ++FN+ DP+NQ +VL +
Sbjct: 693 ENEVG-----KIALHIEKEMFNLFQVTDNRFKSKYRSIMFNLKDPKNQGLFHRVLREEIS 747
Query: 222 PETIINMSAKEMASDKIQLW 241
++ M +E+ S ++ +W
Sbjct: 748 LAKLVRMKPEELVSKELSMW 767
>gi|255932231|ref|XP_002557672.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582291|emb|CAP80469.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 877
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+A+ +E AMYE C G YK + R ++FN+ +N R ++L+G + P+ +
Sbjct: 372 QLALSIEDAMYESICGRTGEPNEAYKAQLRSIMFNVK--KNASLRDRLLIGSLSPKLLSQ 429
Query: 228 MSAKEMASDKIQ 239
M+ EMAS ++Q
Sbjct: 430 MTTAEMASKELQ 441
>gi|383415435|gb|AFH30931.1| death-inducer obliterator 1 isoform b [Macaca mulatta]
Length = 1186
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 664 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 719
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 720 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 767
>gi|327349505|gb|EGE78362.1| transcription elongation factor S-II [Ajellomyces dermatitidis ATCC
18188]
Length = 373
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 17/144 (11%)
Query: 171 IQVAILVESAMYEKWC---RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
+Q AI VE A Y C + Y+ K R L N+ + N R +VL V E +
Sbjct: 238 LQKAIEVELAAYT--CLGPETKEQYRTKMRSLFQNLKNKSNPGLRVRVLSNEVTAEKFVR 295
Query: 228 MSAKEMASDKIQLWNHHLDK---DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQ 284
M+ E+ SD + + K D A+V + VS +CG+CG K++Y
Sbjct: 296 MTHDELKSDAQREEERRIHKENMDKAMVAKA--------ERSVSTSLQCGKCGQRKVTYT 347
Query: 285 HSSILD-DYNLTRHVTCLNCNQYW 307
+ D +T TC C + W
Sbjct: 348 EAQTRSADEPMTLFCTCTVCGKSW 371
>gi|119595732|gb|EAW75326.1| death inducer-obliterator 1, isoform CRA_e [Homo sapiens]
Length = 1225
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 703 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 758
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 759 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 806
>gi|44971658|gb|AAS49898.1| death inducer-obliterator-2 [Homo sapiens]
Length = 1189
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 722
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 723 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 770
>gi|410227676|gb|JAA11057.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410263506|gb|JAA19719.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410304004|gb|JAA30602.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354255|gb|JAA43731.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 1189
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 722
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 723 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 770
>gi|392340808|ref|XP_003754176.1| PREDICTED: SPOC domain-containing protein 1-like [Rattus
norvegicus]
Length = 663
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 105 KVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAAD-KVTID 163
+ E V ++R D G+VP+ ++ + R V + + L + E + ++ D
Sbjct: 24 EAENVQPLQQRAEDPGDVPRAGEREIMPLDVGVRSTVVRAMQEVLWTRTQELPNLELRED 83
Query: 164 LVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPE 223
V+ +A +E+A++ +N YK KYR LLFN+ DP N D KV V P+
Sbjct: 84 EVEG-----IAEGIEAALFHLTQDTNLRYKSKYRNLLFNLRDPRN-DLFLKVAHCDVTPK 137
Query: 224 TIINMSAKEMASDKIQLW 241
++ MS+ ++A ++ W
Sbjct: 138 DLVQMSSIQLAPKELSRW 155
>gi|71044477|ref|NP_542987.2| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|301129172|ref|NP_001180299.1| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|168278571|dbj|BAG11165.1| death-inducer obliterator 1 [synthetic construct]
gi|223459792|gb|AAI37178.1| Death inducer-obliterator 1 [Homo sapiens]
Length = 1189
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 667 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 722
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 723 SKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 770
>gi|148698211|gb|EDL30158.1| mCG52124 [Mus musculus]
Length = 216
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E A++ +N YK KYR LLFN+ DP N D KV V P ++ MS+ +
Sbjct: 33 IAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVAHCDVTPNNLVQMSSIQ 92
Query: 233 MASDKIQLWNHHLDKDG 249
+A ++ W ++ G
Sbjct: 93 LAPKELSRWRDQEERKG 109
>gi|322786324|gb|EFZ12874.1| hypothetical protein SINV_06958 [Solenopsis invicta]
Length = 113
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ D +N + R L+G + P + M+A+EMASD+I+ K+ A+
Sbjct: 1 MQVRSRVANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEIKQLREQFKKE-AIND 59
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ V ++ +D+ +CG+C +Y Q + D +T V C C W
Sbjct: 60 AQLATVQGTK----TDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 110
>gi|355683932|gb|AER97239.1| death inducer-obliterator 1 [Mustela putorius furo]
Length = 804
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 126 SISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW 185
S + + N R+ +R L + L K +++ D + + + ++A+ +E M+ +
Sbjct: 652 SNPALSQPNSQIRQNIRRSLKEILWKRVNDSDDLIMTE----SEVGKIALHIEKEMFNLF 707
Query: 186 CRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHL 245
++ YK +YR ++FN+ DP+NQ +VL + ++ M +E+AS ++ W
Sbjct: 708 QVTDNRYKSRYRSIMFNLKDPKNQGLFHRVLREEISSAKLVRMKPEELASKELSTWRERP 767
Query: 246 DK 247
K
Sbjct: 768 AK 769
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 75/174 (43%), Gaps = 12/174 (6%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
DS R+ E L AL AD D CD ++A +E ++++ ++ Y+
Sbjct: 186 GDSVRDKCVEMLSAALK------ADDDYKDYGVNCD--KMASEIEDHIHQELKSTDMKYR 237
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++
Sbjct: 238 NRVRSRISNLKDPRNPGLRRNVLSGAISTGLIAKMTAEEMASDELRELRNAMTQEAIREH 297
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILDDYNLTRHVTCLNCNQYW 307
G + + + C +N++ + + D +T V C C W
Sbjct: 298 QMAKTGGTTTDLFQCKKCKKKNCTYNQVQTRSA----DEPMTTFVLCNECGNRW 347
>gi|392348387|ref|XP_003750093.1| PREDICTED: SPOC domain-containing protein 1-like [Rattus
norvegicus]
Length = 768
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 105 KVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAAD-KVTID 163
+ E V ++R D G+VP+ ++ + R V + + L + E + ++ D
Sbjct: 129 EAENVQPLQQRAEDPGDVPRAGEREIMPLDVGVRSTVVRAMQEVLWTRTQELPNLELRED 188
Query: 164 LVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPE 223
V+ +A +E+A++ +N YK KYR LLFN+ DP N D KV V P+
Sbjct: 189 EVEG-----IAEGIEAALFHLTQDTNLRYKSKYRNLLFNLRDPRN-DLFLKVAHCDVTPK 242
Query: 224 TIINMSAKEMASDKIQLW 241
++ MS+ ++A ++ W
Sbjct: 243 DLVQMSSIQLAPKELSRW 260
>gi|224007775|ref|XP_002292847.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971709|gb|EED90043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 394
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 180 AMYEKWCRS-NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD-- 236
A + W R Y K R L+FN+ +N R +V+LG V PE ++ M+++E+ +D
Sbjct: 255 AAVDTWSRGVKQTYNEKVRTLVFNLK--KNGPLRDRVILGQVTPERLVKMTSEELQTDEK 312
Query: 237 --------KIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSI 288
K + LD D A G+ + + ++ CGRC K +
Sbjct: 313 AKAIEDTVKSLQESRRLDWDQANEDKINDMCGIKGDLKNASLFTCGRCKSTKTTSTQKQT 372
Query: 289 LD-DYNLTRHVTCLNCNQYW 307
D +T V CLNC + W
Sbjct: 373 RSADEPMTVFVLCLNCGKRW 392
>gi|307203942|gb|EFN82849.1| Death-inducer obliterator 1 [Harpegnathos saltator]
Length = 2352
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL 200
+R+ L + LS E D D A +A +E MY+ + + YK KYR L+
Sbjct: 1319 IRKSLTELLSSRIKETEDLKLTDEEIA----DLAFNIELEMYKYFKDTGAKYKAKYRSLV 1374
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
FNI D +N RK+ + P+ ++ +S EMAS ++ W
Sbjct: 1375 FNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQELAEW 1415
>gi|322795023|gb|EFZ17875.1| hypothetical protein SINV_15581 [Solenopsis invicta]
Length = 695
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E MY+ + + YK KYR L+FNI D +N RK+ + P+ ++ +S E
Sbjct: 169 LAFNIELEMYKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDE 228
Query: 233 MASDKIQLW 241
MAS ++ W
Sbjct: 229 MASQELAEW 237
>gi|156102921|ref|XP_001617153.1| transcription elongation factor [Plasmodium vivax Sal-1]
gi|148806027|gb|EDL47426.1| transcription elongation factor, putative [Plasmodium vivax]
Length = 435
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 9/179 (5%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC---RSNG 190
ND R+ ++ L+ A SD+ ID K D + +E+ +++ + +S
Sbjct: 259 NDVLRDKAKQFLFKAFITGSDDNL-LYLIDRKKLND---IIYNIENELHKFFIEKKQSQK 314
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD-KIQLWNHHLDKDG 249
Y + + + FN+ D +N F K+ ++ P TI M+++EMASD K + N L +
Sbjct: 315 EYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDEKKKERNKCLQESL 374
Query: 250 ALVTGHIFPVGLSRKIIVSDIYECGRC-GHNKISYQHSSILDDYNLTRHVTCLNCNQYW 307
+ K ++C +C G+ + +Q + D +T VTCL CN W
Sbjct: 375 QACQSDWDVKNILLKKTRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVTCLKCNNRW 433
>gi|195500468|ref|XP_002097386.1| GE26190 [Drosophila yakuba]
gi|194183487|gb|EDW97098.1| GE26190 [Drosophila yakuba]
Length = 2001
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 122 VPKKSISCMIKCNDSFREIVREKLYDAL--SKVSDEAADKVTIDLVKACDPIQVAILVES 179
VP +S R +RE+L + ++ ++E+ + + + Q VE
Sbjct: 1255 VPNRSAGKPEPVRIGIRRSLREQLLARIKEAQAAEESLGQAPTQWLTVLEVDQFVRSVEL 1314
Query: 180 AMYEKWCRSNGM-YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
M+ + R G YK KYR L+FNI D +N+ K+ V+P+ ++ M+ +++AS ++
Sbjct: 1315 EMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTPEQLASQEL 1374
Query: 239 QLW-----NHHLD 246
W H LD
Sbjct: 1375 AKWREEENRHQLD 1387
>gi|345487114|ref|XP_003425625.1| PREDICTED: hypothetical protein LOC100679883 isoform 2 [Nasonia
vitripennis]
Length = 2039
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 135 DSFREIVREKLYDALSKVSDEAAD-KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
+ R VR+ L + L+ EA D +T + + ++A+ +E M++ + + YK
Sbjct: 1303 EPIRLTVRKTLAELLTSRVKEANDLAITEEEIS-----ELALQIELEMFKFFKDTGQKYK 1357
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
KYR L+FNI D +N RK+ + P ++ +S EMAS ++ W +K
Sbjct: 1358 SKYRSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQELAEWREKENK 1411
>gi|332030327|gb|EGI70070.1| Death-inducer obliterator 1 [Acromyrmex echinatior]
Length = 2282
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
+ R +R+ L + LS E D D A +A +E MY+ + + YK
Sbjct: 1261 EPIRVNIRKSLTELLSSRIKETKDLKLTDEEIA----DLAFNIEFEMYKYFKDTGSKYKA 1316
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
KYR L+FNI D +N RK+ + P+ ++ +S EMAS ++ W
Sbjct: 1317 KYRSLVFNIKDTKNLTLFRKIADHSLTPDAVVRLSPDEMASQELAEW 1363
>gi|345487112|ref|XP_003425624.1| PREDICTED: hypothetical protein LOC100679883 isoform 1 [Nasonia
vitripennis]
Length = 2181
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 135 DSFREIVREKLYDALSKVSDEAAD-KVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
+ R VR+ L + L+ EA D +T + + ++A+ +E M++ + + YK
Sbjct: 1296 EPIRLTVRKTLAELLTSRVKEANDLAITEEEIS-----ELALQIELEMFKFFKDTGQKYK 1350
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
KYR L+FNI D +N RK+ + P ++ +S EMAS ++ W +K
Sbjct: 1351 SKYRSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQELAEWREKENK 1404
>gi|19074096|ref|NP_584702.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|19068738|emb|CAD25206.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|449329004|gb|AGE95279.1| transcription elongation factor sII [Encephalitozoon cuniculi]
Length = 257
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 159 KVTIDLVKA----CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRK 214
K+ D +K C+ A+L E + R+ R N+ D N R+
Sbjct: 108 KMFFDAIKTNISDCNNASAALLARQITIEIFGRNPSDIAKLIRSKCLNLKDKNNPALCRR 167
Query: 215 VLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECG 274
V G + P ++MS++EM S+ ++ +++ ++ ++ + + +DI++C
Sbjct: 168 VYNGDISPSRYVDMSSEEMKSESLK------NEEVKMIEVSLYECQIPTQKAETDIFKCS 221
Query: 275 RCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+CG K SY Q + D +T VTC C W
Sbjct: 222 KCGERKCSYRQLQTRSGDEPMTTFVTC-ECGNKW 254
>gi|399215957|emb|CCF72645.1| unnamed protein product [Babesia microti strain RI]
Length = 300
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 116/279 (41%), Gaps = 32/279 (11%)
Query: 34 ALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVA 93
L I N +T ++L T+V + + K I + A ++I+ W+ + ++ V+
Sbjct: 47 TLSSIANLEVTREILTETKVGVSVQKIAKEKIYPISEQAENVIAGWKKALDNQKNRNIVS 106
Query: 94 VTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVS 153
+K + VE +G S N K++S + K + S
Sbjct: 107 PPEKIRHVEQSATINDYSGPLTNDPSRN---KALSILYKA-----------FLKGFPQNS 152
Query: 154 DEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRR 213
+ ++KV +L+ +E ++E + +Y + + + FN+ D N
Sbjct: 153 PQPSNKVASELIYN---------LEQHVFESF-HEKRLYAQQIKSIRFNLQDNNNTQLNY 202
Query: 214 KVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSD---- 269
+ +G + P+ + M+ ++MAS+K++ + K+ L + V + I++S
Sbjct: 203 NLHVGEITPQQLATMAPQDMASEKLKRKREMVLKESMLACQSDWAV---KNILLSSKTPG 259
Query: 270 IYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ C +C +K Y Q + D +T VTCL C W
Sbjct: 260 QFTCFKCKQSKTVYTQVQTRSSDEPMTTFVTCLVCQNRW 298
>gi|307187162|gb|EFN72405.1| Death-inducer obliterator 1 [Camponotus floridanus]
Length = 2322
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL 200
+R+ L + LS E D D A +A +E MY+ + + YK KYR L+
Sbjct: 1309 IRKTLTELLSSRIKETEDLKLTDEEIA----DLAFNIELEMYKYFKDTGSKYKAKYRSLV 1364
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
FNI D +N RK+ + P+ ++ +S EMAS ++ W
Sbjct: 1365 FNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQELAEW 1405
>gi|195110799|ref|XP_001999967.1| GI24826 [Drosophila mojavensis]
gi|193916561|gb|EDW15428.1| GI24826 [Drosophila mojavensis]
Length = 2080
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 177 VESAMYEKWCRS-NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMAS 235
VES MY + + + YK KYR L+FNI D +N+ K+ V+P+ ++ M+ E+AS
Sbjct: 1366 VESEMYNSFGQDVSAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELAS 1425
Query: 236 DKIQLW-----NHHLD 246
++ W H LD
Sbjct: 1426 QELAKWREEENRHQLD 1441
>gi|357618039|gb|EHJ71135.1| hypothetical protein KGM_08149 [Danaus plexippus]
Length = 1879
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 105 KVEEVTNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDAL-SKVSDEAADKVTID 163
K V+ RR D+ + + D RE VR+ L + + S++++ K T +
Sbjct: 970 KTPSVSPSTSRRKDTPDR-----RSRMSSEDPIRENVRKALQEQIASRMAEYDGPKFTEE 1024
Query: 164 LVKACDPIQVAILVESAMYEKWCRSNGM-YKFKYRCLLFNISDPENQDFRRKVLLGHVKP 222
++ Q A E ++E + R GM YK KYR L+FNI D +N K+ + P
Sbjct: 1025 EIQ-----QFAYDTELELHELFNRDVGMKYKAKYRSLMFNIKDRKNLSLWEKICEKVITP 1079
Query: 223 ETIINMSAKEMASDKIQLW 241
+ ++ S +E+AS ++ W
Sbjct: 1080 KQLVRFSPEELASQELAQW 1098
>gi|297807181|ref|XP_002871474.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
gi|297317311|gb|EFH47733.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E +Y+ + N Y+ + R LLFN+ D N D R +V+ + E + +M
Sbjct: 200 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPDLRERVMSEEISAERLCSM 259
Query: 229 SAKEMASDKIQLWNH 243
+A+E+AS ++ W
Sbjct: 260 TAEELASKELSQWRQ 274
>gi|242025624|ref|XP_002433224.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518765|gb|EEB20486.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 2246
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 173 VAILVESAMYEKW-CRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAK 231
++I +E +++ + + + YK KYR L+FNI DP+N+ +K++ + P+ ++ +S +
Sbjct: 1154 LSIKIEEKLFKHFENKVDTKYKSKYRSLIFNIKDPKNETLYKKIVDNLISPKDLVKLSPE 1213
Query: 232 EMASDKIQLW----NHH 244
E+AS ++ W N H
Sbjct: 1214 ELASQELARWREKENQH 1230
>gi|91083709|ref|XP_969911.1| PREDICTED: similar to AGAP004866-PA [Tribolium castaneum]
gi|270007882|gb|EFA04330.1| hypothetical protein TcasGA2_TC014624 [Tribolium castaneum]
Length = 1612
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 13/117 (11%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
D+ ++ V E+L + L V D K++ + +K +++ +ES +Y+ + + Y+
Sbjct: 823 DNVKKTVYEQLTNRLKMVDDL---KLSEEELK-----NISLEIESQLYKCFGDTGQKYRN 874
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHHLD 246
KYR L+FNI D +NQ R++ + P ++ +S ++AS ++ LW H LD
Sbjct: 875 KYRSLIFNIKDIKNQTLWRRICEKTINPYQLVRLSPDDLASQELALWRERETKHQLD 931
>gi|40287878|gb|AAR84049.1| death inducer-obliterator-2 [Mus musculus]
Length = 1183
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 112 GEERRHDSGNVPKKSIS---------CMIKCNDSFREIVREKLYDAL-SKVSDEAADKVT 161
G R+ S NVP S + + N R+ +R L + L +V+D +T
Sbjct: 633 GVTRKPMSANVPAASPAPGRLGPVSPAPSQPNSQIRQNIRRSLKEILWKRVNDSDYLIMT 692
Query: 162 IDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVK 221
+ V ++A+ +E M+ + ++ +K KYR ++FN+ DP+NQ +VL +
Sbjct: 693 ENEVG-----KIALHIEKEMFNLFQVTDNRFKSKYRSIMFNLKDPKNQGLFHRVLREEIS 747
Query: 222 PETIINMSAKEMASDKIQLW 241
++ M +E+ S ++ +W
Sbjct: 748 LAKLVRMKPEELVSKELSMW 767
>gi|24646283|ref|NP_650193.1| protein partner of snf, isoform A [Drosophila melanogaster]
gi|7299622|gb|AAF54807.1| protein partner of snf, isoform A [Drosophila melanogaster]
Length = 2016
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 138 REIVREKLYDAL--SKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YKF 194
R +RE+L + ++ ++E + + T + Q VE M+ + R G YK
Sbjct: 1279 RRSLREQLLARIKEAQAAEENSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKA 1338
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHHLD 246
KYR L+FNI D +N+ K+ V+P ++ M+ +++AS ++ W H LD
Sbjct: 1339 KYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEENRHQLD 1395
>gi|386765657|ref|NP_001247075.1| protein partner of snf, isoform B [Drosophila melanogaster]
gi|383292673|gb|AFH06393.1| protein partner of snf, isoform B [Drosophila melanogaster]
Length = 2018
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 138 REIVREKLYDAL--SKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YKF 194
R +RE+L + ++ ++E + + T + Q VE M+ + R G YK
Sbjct: 1281 RRSLREQLLARIKEAQAAEENSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYKA 1340
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHHLD 246
KYR L+FNI D +N+ K+ V+P ++ M+ +++AS ++ W H LD
Sbjct: 1341 KYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEENRHQLD 1397
>gi|444707355|gb|ELW48637.1| SPOC domain-containing protein 1 [Tupaia chinensis]
Length = 694
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKP 222
+A VE+A+++ + G YK KYR LLFN+ DP N D KVL G V P
Sbjct: 133 IAAGVEAALFDLTQGTQGRYKAKYRSLLFNLRDPRNPDLFLKVLHGDVTP 182
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACD-PIQVAILVESAMYEKWCRSNGMYK 193
D+ R RE L +AL +V + + C P ++A +E A+Y ++ ++ YK
Sbjct: 140 DAVRLKCREMLTNAL---------RVDGEQPEGCQSPEELADELEEAIYVEFKNTDMKYK 190
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK----DG 249
+ R + N+ DP+N R + G + + + M+ +EMASD+++ K D
Sbjct: 191 NRVRSRVANLKDPKNPSLRSNFVSGAITAQRLAKMTPEEMASDEMKNLRDRFVKEAINDA 250
Query: 250 ALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
L T +D+ +CG+C +Y Q + D +T V C C W
Sbjct: 251 QLATNQ---------GTKTDLLKCGKCKKRNCTYNQLQTRSSDEPMTTFVLCNECGHRW 300
>gi|453082690|gb|EMF10737.1| transcription elongation factor S-II [Mycosphaerella populorum
SO2202]
Length = 312
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCR-SNGMY 192
D R+ + +YD ++ +S+E+ D V VA VE A +E + + ++ Y
Sbjct: 149 GDKVRDGCLKLMYDGIAFMSEESPDAV----------FDVARRVEVAAFEHYRQETSNDY 198
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
K K R L N+ +N+ RR V + + ++ M+++++ S+ + + + ++ V
Sbjct: 199 KTKMRSLFQNLKMKDNKLLRRDVFSQKIDAKRLVTMTSEDLKSEDRRKEDEAMKEENMRV 258
Query: 253 TGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+ P +S + C +C +K+SY + D LT C C W
Sbjct: 259 A--MTP---QEAKAISTTFTCAKCKESKVSYSQAQTRSADEPLTTFCECTVCGHRW 309
>gi|261338797|gb|ACX70080.1| UT01587p [Drosophila melanogaster]
Length = 1144
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 137 FREIVREKLYDAL--SKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-YK 193
R +RE+L + ++ ++E + + T + Q VE M+ + R G YK
Sbjct: 406 IRRSLREQLLARIKEAQAAEENSGQPTTQWPTVLEVDQFVKNVELEMFNSFGRDVGAKYK 465
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHHLD 246
KYR L+FNI D +N+ K+ V+P ++ M+ +++AS ++ W H LD
Sbjct: 466 AKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLASQELAKWREEENRHQLD 523
>gi|4217|emb|CAA24928.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 128
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 7/124 (5%)
Query: 186 CRSN-GMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHH 244
C +N YK +YR + N+ N D + K+ G + PE + AK++A ++
Sbjct: 7 CDTNEAAYKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEE 66
Query: 245 LDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNC 303
+ K L G + + V+D + CG+C K+S YQ + D LT TC C
Sbjct: 67 IAKQN-LYNAQ----GATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEAC 121
Query: 304 NQYW 307
W
Sbjct: 122 GNRW 125
>gi|70991879|ref|XP_750788.1| PHD finger domain protein [Aspergillus fumigatus Af293]
gi|66848421|gb|EAL88750.1| PHD finger domain protein, putative [Aspergillus fumigatus Af293]
Length = 884
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+ +E AMY+ C +G YK + R +LFN+ +N R ++L+G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 228 MSAKEMASDKI 238
MS+++MAS+++
Sbjct: 383 MSSQDMASEEL 393
>gi|452821015|gb|EME28050.1| hypothetical protein Gasu_43890 [Galdieria sulphuraria]
Length = 707
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 139 EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRC 198
E +REK + L+++ E + +D+ K + ++AI +E+A++EK+ +++ Y + R
Sbjct: 183 ENIREKAKNVLNQILLENLEDTGVDIDK-TNISKIAIDIENALFEKYFKAD--YLEQLRS 239
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMAS 235
L FN+ N D +R +++ + P + M+A E+AS
Sbjct: 240 LTFNLRGKRNLDLKRAIVMSDISPTRLAEMTADELAS 276
>gi|159124350|gb|EDP49468.1| PHD finger domain protein, putative [Aspergillus fumigatus A1163]
Length = 885
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 172 QVAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
Q+ +E AMY+ C +G YK + R +LFN+ +N R ++L+G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 228 MSAKEMASDKI 238
MS+++MAS+++
Sbjct: 383 MSSQDMASEEL 393
>gi|50556790|ref|XP_505803.1| YALI0F23815p [Yarrowia lipolytica]
gi|74632309|sp|Q6C0K9.1|BYE1_YARLI RecName: Full=Transcription factor BYE1
gi|49651673|emb|CAG78614.1| YALI0F23815p [Yarrowia lipolytica CLIB122]
Length = 822
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 8/73 (10%)
Query: 173 VAILVESAMYEKWCR------SNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETII 226
+A+ +E +Y+ + SN Y+ K+R L FN+ D +N+ R +V+ G V P+T++
Sbjct: 237 LALTIEQELYDAYGTVEPEIGSN--YRDKFRTLSFNLRDSKNETLRIRVMTGQVTPQTLV 294
Query: 227 NMSAKEMASDKIQ 239
MS++EM + ++Q
Sbjct: 295 AMSSEEMMNPELQ 307
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y+ + R + N+ DP N RR VL G + I M+A+EMASD+++ + + ++ A+
Sbjct: 231 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE-AI 289
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQH 285
+ G + +D+++C +C +Y
Sbjct: 290 REHQMAKTGGT----TTDLFQCSKCKKKNCTYNQ 319
>gi|405944776|pdb|2LW4|A Chain A, Solution Nmr Structure Of Human Transcription Elongation
Factor A Protein 2, Central Domain, Northeast Structural
Genomics Consortium (Nesg) Target Hr8682b
Length = 113
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
D+ R RE L AL D A D +++ +E ++ ++ YK
Sbjct: 10 DAVRNKCREMLTAALQTDHDHVA--------IGADCERLSAQIEECIFRDVGNTDMKYKN 61
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
+ R + N+ D +N D RR VL G + P+ I M+++EMASD+++
Sbjct: 62 RVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELK 106
>gi|325182938|emb|CCA17393.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325189886|emb|CCA24366.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 277
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 158 DKVTIDLVKACDPIQVAILVESAMYE--KWCRS-NGMYKFKYRCLLFNISDPENQDFRRK 214
DK+ L D Q+A+ VE+ ++E K C + Y K R LLFN+ D N R +
Sbjct: 126 DKIMRPLADNSD--QIAMEVENQLFELYKECFTLPKAYGQKARQLLFNLRDSRNDLLRDR 183
Query: 215 VLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECG 274
++ G + ++ MSA EMA+ ++ K P S + SD++EC
Sbjct: 184 LMSGELSAAALVRMSANEMANPQLVKQRKQWIKKRTYEVMRNAPDLES--LTESDMFECR 241
Query: 275 RCGHNKISYQH---SSILDDYNLTRHVTCLNCNQYW 307
CG ++ Y+ +I+D + + C C W
Sbjct: 242 SCGCSRTRYRQWRRKAIVDRTRII--IICTQCPYRW 275
>gi|145349019|ref|XP_001418938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579168|gb|ABO97231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 528
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKF 194
+ R VRE + A+ ++E K + P +VA VESA+Y+K ++ Y+
Sbjct: 9 EKIRSTVREFILKAMEMAAEET--KASGHDEANGTPSEVAAAVESALYKKCGSADKEYRT 66
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW---NHHLDKDGAL 251
+ R L N+ D N R +VL +K +++MS ++A+ ++ W + +GA
Sbjct: 67 RARSLKSNLQDVRNPQLRARVLANDLKASQLVDMSPLQLANKELVEWRKARQEIAGEGAF 126
Query: 252 VTG 254
+ G
Sbjct: 127 MKG 129
>gi|168050394|ref|XP_001777644.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670987|gb|EDQ57546.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1465
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 172 QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAK 231
++A +E+ +++ + S MY K R LLFN+ D N + R +V G + PE + MS +
Sbjct: 359 KLATDIEAELFKLY-GSKKMYNQKARSLLFNLKDKSNPELRARVFSGEIPPEDLCRMSGE 417
Query: 232 EMASDKIQLWNH 243
++AS ++ W +
Sbjct: 418 QLASKELSDWRN 429
>gi|340719413|ref|XP_003398148.1| PREDICTED: hypothetical protein LOC100650691 [Bombus terrestris]
Length = 2365
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 141 VREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL 200
+R+ L + LS E D D A +A +E +Y+ + + YK KYR L+
Sbjct: 1273 IRKTLTELLSSRIKETEDLKLTDEEIA----DLAYNIELELYKYFKDTGAKYKAKYRSLV 1328
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
FNI D +N RK+ + P+ ++ +S EMAS ++ W
Sbjct: 1329 FNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQELAEW 1369
>gi|225557325|gb|EEH05611.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 892
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ + +E AMY+ C +G YK + R +LFN+ +N R +L+G + P+T+ M
Sbjct: 323 LGVAIEHAMYKHLCGGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATM 380
Query: 229 SAKEMASDKIQ 239
S ++MAS +++
Sbjct: 381 STQDMASKELR 391
>gi|333361278|pdb|3NDQ|A Chain A, Structure Of Human Tfiis Domain Ii
Length = 108
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 16/116 (13%)
Query: 122 VPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAM 181
P S S +KC RE L AL + D D + I D ++ +E A+
Sbjct: 9 APSTSDSVRLKC--------REMLAAAL-RTGD---DYIAI----GADEEELGSQIEEAI 52
Query: 182 YEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDK 237
Y++ ++ YK + R + N+ D +N + R+ VL G++ P+ M+A+EMASD+
Sbjct: 53 YQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDE 108
>gi|325096028|gb|EGC49338.1| PHD finger domain-containing protein [Ajellomyces capsulatus H88]
Length = 896
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ + +E AMY+ C +G YK + R +LFN+ +N R +L+G + P+T+ M
Sbjct: 323 LGVAIEHAMYKHLCGGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATM 380
Query: 229 SAKEMASDKIQ 239
S ++MAS +++
Sbjct: 381 STQDMASKELR 391
>gi|240277967|gb|EER41474.1| PHD finger domain-containing protein [Ajellomyces capsulatus H143]
Length = 851
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ + +E AMY+ C +G YK + R +LFN+ +N R +L+G + P+T+ M
Sbjct: 323 LGVAIEHAMYKHLCGGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATM 380
Query: 229 SAKEMASDKIQ 239
S ++MAS +++
Sbjct: 381 STQDMASKELR 391
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 35/192 (18%)
Query: 129 CMIKC---NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKW 185
C+ C DS R+ E L AL D V D ++A +E + +
Sbjct: 181 CLAPCYLTGDSVRDKCVEMLSAALKMDDDYKEYGVNCD--------KMASEIEDHILSEL 232
Query: 186 CRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ------ 239
++ Y+ + R + N+ DP N + RR VL G + I M+A+EMASD+++
Sbjct: 233 KGTDMKYRNRVRSRISNLKDPRNPNLRRNVLCGAISTSLIARMTAEEMASDELKELRNAM 292
Query: 240 ----LWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILDDYNLT 295
+ H + K G T + + C +N++ + + D +T
Sbjct: 293 TLEAIREHQMAKTGGTTT----------DLFQCXKCKKKNCTYNQVQTRSA----DEPMT 338
Query: 296 RHVTCLNCNQYW 307
V C C W
Sbjct: 339 TFVLCNECGNRW 350
>gi|291224586|ref|XP_002732285.1| PREDICTED: PHD finger protein 3-like [Saccoglossus kowalevskii]
Length = 1741
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%)
Query: 172 QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAK 231
+V +E +++ + ++ YK KYR L+FN+ D N+ R+VL G + P ++ M+++
Sbjct: 820 KVVNRIEHELFKLYQDTSSKYKAKYRTLMFNLKDVNNKGLFRRVLKGDISPSKLVGMTSE 879
Query: 232 EMASDKIQLW 241
+MA ++ W
Sbjct: 880 QMACKELFEW 889
>gi|298713146|emb|CBJ26902.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 437
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 30/187 (16%)
Query: 129 CMIKCNDSFR-EIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCR 187
C+ K + +R ++VRE+++ AL A P A VE A++
Sbjct: 271 CVSKRIEEYRVKVVRERVFTALE--------------TSATLPASKAKEVEDAIFALCGG 316
Query: 188 S-NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLD 246
S YK K R + FN+ +N R ++L G + P ++ MS+ ++A ++
Sbjct: 317 SVTKAYKAKAREMSFNLRVGKNDPLRERLLSGSLLPSDLVRMSSNDLAPLSVRRERERFA 376
Query: 247 KDGALVTGHIFPVGLSRKI---IVSDIYECGRCGHNKISY---QHSSILDDYNLTRHVTC 300
+ I V SR V+D + C CGH K Y + +++D + V C
Sbjct: 377 RK------RIREVTSSRDSPFHTVTDRFACVECGHEKTQYRTWRRKAVVDRVRVI--VQC 428
Query: 301 LNCNQYW 307
L C W
Sbjct: 429 LQCRHSW 435
>gi|170036777|ref|XP_001846238.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879681|gb|EDS43064.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 301
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
P ++ +E A++ ++ ++ YK + R + N+ D +N R + G + + + M+
Sbjct: 165 PEELGDELEEAIFSEFRNTDMKYKNRVRSRVANLKDLKNPSLRSNYINGAITAQRLAKMT 224
Query: 230 AKEMASDKIQLWNHHLDK----DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-Q 284
+EMASD+++ K D L T +D+ +CG+C +Y Q
Sbjct: 225 PEEMASDEMKNLRDRFVKEAINDAQLATNQ---------GTKTDLLKCGKCKKRNCTYNQ 275
Query: 285 HSSILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 276 LQTRSSDEPMTTFVLCNECGNRW 298
>gi|195329544|ref|XP_002031470.1| GM24029 [Drosophila sechellia]
gi|194120413|gb|EDW42456.1| GM24029 [Drosophila sechellia]
Length = 2010
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 177 VESAMYEKWCRSNGM-YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMAS 235
VE M+ + R G YK KYR L+FNI D +N+ K+ V+P ++ M+ +++AS
Sbjct: 1318 VELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTPEQLAS 1377
Query: 236 DKIQLW-----NHHLD 246
++ W H LD
Sbjct: 1378 QELAKWREEENRHQLD 1393
>gi|170036779|ref|XP_001846239.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879682|gb|EDS43065.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 292
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 170 PIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
P ++ +E A++ + ++ YK + R + N+ DP+N R + G + E + M+
Sbjct: 156 PEELGEELEEAIFAEIKNTDFRYKNRVRSRVANLKDPKNPSLRANFVSGAITAERLAKMT 215
Query: 230 AKEMASDKIQLWNHHLDK----DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-Q 284
+EMASD+++ K D L T +D+ +CG+C +Y Q
Sbjct: 216 PEEMASDEMKNLRDRFVKEAINDAQLATNQ---------GTKTDLLKCGKCKKRNCTYNQ 266
Query: 285 HSSILDDYNLTRHVTCLNCNQYW 307
+ D +T V C C W
Sbjct: 267 LQTRSADEPMTTFVLCNECGNRW 289
>gi|402086070|gb|EJT80968.1| transcription elongation factor S-II [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 295
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 24/198 (12%)
Query: 111 NGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDP 170
+ +R+ D+ V KK + + R+ + LY+ L+ +S D + LVKA
Sbjct: 118 DASKRKWDTDGVDKK------RTGSATRDNIIGLLYNGLAYMSYAPIDDI---LVKA--- 165
Query: 171 IQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
I VESA ++++ Y+ + R L N+ N++ ++V G + + M++
Sbjct: 166 ----IEVESAAFKEYNGETADYRTQMRSLFSNLK--ANRELAKRVFAGDIATAKFVKMTS 219
Query: 231 KEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSIL 289
E+ SD ++ L+K+ + + V S +SD ECG+C K+SY Q +
Sbjct: 220 DELKSDHLKKKEEALEKEN-MKKAQVPMVERS----ISDALECGKCKQKKVSYTQAQTRS 274
Query: 290 DDYNLTRHVTCLNCNQYW 307
D +T C C W
Sbjct: 275 ADEPMTTFCECTVCGNRW 292
>gi|186522138|ref|NP_196704.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|332004296|gb|AED91679.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 873
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E +Y+ + N Y+ + R LLFN+ D N + R +V+ + E + +M
Sbjct: 260 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSM 319
Query: 229 SAKEMASDKIQLWNH 243
+A+E+AS ++ W
Sbjct: 320 TAEELASKELSQWRQ 334
>gi|7573400|emb|CAB87703.1| putative protein [Arabidopsis thaliana]
Length = 871
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 169 DPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
DP +A +E +Y+ + N Y+ + R LLFN+ D N + R +V+ + E + +M
Sbjct: 258 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSM 317
Query: 229 SAKEMASDKIQLWNH 243
+A+E+AS ++ W
Sbjct: 318 TAEELASKELSQWRQ 332
>gi|312382732|gb|EFR28086.1| hypothetical protein AND_04400 [Anopheles darlingi]
Length = 420
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACD-PIQVAILVESAMYEKWCRSNGMYK 193
D+ R RE L +AL +V + + C P ++ +E A++ ++ ++ YK
Sbjct: 169 DAVRLKCREMLANAL---------RVDGEPPEGCQTPEELGEELEEAIFVEFKNTDMRYK 219
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP+N R + G + + + M+++EMASD+++L K+ A+
Sbjct: 220 NRIRSRVANLKDPKNPSLRSNFVSGALTAQRLAKMTSEEMASDEMKLLRDRFVKE-AIND 278
Query: 254 GHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTC 300
+ V ++ +D+ +CG+C +Y Q + D +T V C
Sbjct: 279 AQLATVQGTK----TDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVMC 322
>gi|119579238|gb|EAW58834.1| hCG1746234, isoform CRA_b [Homo sapiens]
Length = 241
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 124 KKSISCMI-----KCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVE 178
K S +C I +DS R RE L AL + D+ + T D ++ E
Sbjct: 62 KPSNTCFICSLARSTSDSVRMKYREMLPAAL-RTGDDCIEMGT-------DEEELGSRTE 113
Query: 179 SAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
A+ + + YK + + + N++D +N D R+ G++ P+ + M+A+EMASD++
Sbjct: 114 EAIDPERGNTGMKYKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDEL 173
Query: 239 QLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRC-GHNKISYQHSSILDDYNLTRH 297
+ + +L K+ A+ + G ++ D C +C N S Q + +T
Sbjct: 174 KEMHKNLRKE-AIREHQMAKTGGTQ----PDSLTCAKCKKKNCTSTQVQACSAGEPMTTF 228
Query: 298 VTCLNC 303
V C C
Sbjct: 229 VDCNEC 234
>gi|115468770|ref|NP_001057984.1| Os06g0595900 [Oryza sativa Japonica Group]
gi|113596024|dbj|BAF19898.1| Os06g0595900, partial [Oryza sativa Japonica Group]
Length = 630
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E ++ N YK K R LLFN+ D N R +VL G + P+ + +M+ +E
Sbjct: 80 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 139
Query: 233 MASDKIQLW 241
+AS ++ W
Sbjct: 140 LASKELSDW 148
>gi|380804173|gb|AFE73962.1| death-inducer obliterator 1 isoform b, partial [Macaca mulatta]
Length = 243
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 132 KCNDSFREIVREKLYDAL-SKVSDEAADKVTIDLVKACDPI-QVAILVESAMYEKWCRSN 189
+ N R+ +R L + L +V+D + DL+ + + ++A+ +E M+ + ++
Sbjct: 37 QPNSQIRQNIRRSLKEILWKRVND------SDDLIMTENEVGKIALHIEKEMFNLFQVTD 90
Query: 190 GMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YK KYR ++FN+ DP+NQ +VL + ++ + +E+ S ++ W
Sbjct: 91 NRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTW 142
>gi|302796655|ref|XP_002980089.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
gi|302811590|ref|XP_002987484.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300144890|gb|EFJ11571.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300152316|gb|EFJ18959.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
Length = 58
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
YK K R L+FN+ D N D R +V +G V PE + +M+ +++AS ++ W
Sbjct: 2 YKEKARSLVFNLKDKNNPDLRARVFVGEVSPEQLCSMTIEQLASKELSQW 51
>gi|154274572|ref|XP_001538137.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414577|gb|EDN09939.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 892
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ + +E +MY+ C +G YK + R +LFN+ +N R +L+G + P+T+ M
Sbjct: 323 LGVAIEHSMYKHLCGGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATM 380
Query: 229 SAKEMASDKIQ 239
S ++MAS +++
Sbjct: 381 STQDMASKELR 391
>gi|449690494|ref|XP_002161127.2| PREDICTED: uncharacterized protein LOC100205379, partial [Hydra
magnipapillata]
Length = 1145
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
+ES + + + +N YK K R L+FN+ D +N+ ++V+ G + P ++ M+ +++A+
Sbjct: 53 IESELLKLFVETNNKYKAKSRSLIFNLRDNQNKILYKRVVSGEITPYELVRMTPEQLATP 112
Query: 237 KIQLW-----NHHLD 246
+ W HHL+
Sbjct: 113 ALAQWREQESKHHLE 127
>gi|303388862|ref|XP_003072664.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
gi|303301806|gb|ADM11304.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
Length = 256
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
A+L + E + RS R N+ D N R+V G + P ++M+++E
Sbjct: 125 AALLAKQITVEIFGRSPSDIAKLVRSKCLNLKDKNNPVLCRRVYDGDISPSRYVDMTSEE 184
Query: 233 MASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDD 291
M S+ ++ +++ ++ ++ + + +D+++C +CG K SY Q + D
Sbjct: 185 MKSENLK------NEEVKMIEDSLYECQIPTQKAETDMFKCSKCGERKCSYRQLQTRSGD 238
Query: 292 YNLTRHVTCLNCNQYW 307
+T VTC C W
Sbjct: 239 EPMTTFVTC-ECGNKW 253
>gi|47200172|emb|CAF87330.1| unnamed protein product [Tetraodon nigroviridis]
Length = 255
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 62/159 (38%), Gaps = 47/159 (29%)
Query: 181 MYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA---------- 230
+Y++ ++ YK + R + N+ DP+N R+ VL G + I +MSA
Sbjct: 111 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEVGAARPDRS 170
Query: 231 -----------KEMASDKI-QLWN---------HHLDKDGALVTGHIFPVGLSRKIIVSD 269
KEMASD++ QL N H + K G T D
Sbjct: 171 GAPPFHVCVSTKEMASDELKQLRNTLTQEAIREHQMAKTGGTTT---------------D 215
Query: 270 IYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ +CG+C +Y Q + D +T V C C W
Sbjct: 216 LLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 254
>gi|221061105|ref|XP_002262122.1| transcription factor [Plasmodium knowlesi strain H]
gi|193811272|emb|CAQ42000.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 407
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 9/179 (5%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC---RSNG 190
ND R+ ++ L+ A SD+ ID K D I +E+ +++ + +S
Sbjct: 231 NDVLRDKAKQFLFKAFITGSDDNL-LYLIDRKKLNDII---YNIENELHKIFIEKKQSQK 286
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD-KIQLWNHHLDKDG 249
Y + + + FN+ D +N F K+ ++ P+ I M+++EMASD K + N L +
Sbjct: 287 EYNMQLKSIKFNLCDKKNPSFNEKIYAEYISPKIIATMNSQEMASDEKKKERNKCLQESL 346
Query: 250 ALVTGHIFPVGLSRKIIVSDIYECGRC-GHNKISYQHSSILDDYNLTRHVTCLNCNQYW 307
+ K ++C +C G+ + +Q + D +T VTCL CN W
Sbjct: 347 QACQSDWDVKNILLKKNRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVTCLKCNNRW 405
>gi|449020026|dbj|BAM83428.1| probable transcription elongation factor S-II [Cyanidioschyzon
merolae strain 10D]
Length = 794
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y KYR L N+ N D R ++L + P +++MSA+ + +++ + +++ +
Sbjct: 683 YSAKYRELKANLR--RNADLRWRLLRQELSPAELVDMSAEALKTEQAR------EREAEI 734
Query: 252 VTGHIF--PVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+F G+ + +D + CG+CG +Y Q + D +T VTC +C W
Sbjct: 735 AERMLFHKQRGIP-QAASTDQFRCGKCGQRSCTYFQMQTRSADEPMTTFVTCTHCGNRW 792
>gi|452979563|gb|EME79325.1| hypothetical protein MYCFIDRAFT_57652 [Pseudocercospora fijiensis
CIRAD86]
Length = 312
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 145 LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC-RSNGMYKFKYRCLLFNI 203
+YD ++ +SD++ D + VA VE A +E + +++ YK K R L N+
Sbjct: 160 MYDGIAYMSDKSPDAI----------FDVARKVEVAAFEHFKHQTSPEYKAKMRSLYQNL 209
Query: 204 SDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLS- 262
N R+ V + P+ + M++ E+ S++++ K+ A++ ++
Sbjct: 210 KMKGNARLRKDVYSMEIMPKRFVAMTSDELKSEEMR-------KEDAVIERENMNKAMTA 262
Query: 263 -RKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
+ +S + CG+C K++Y + D LT C C W
Sbjct: 263 QEEKAISTTFVCGKCKQAKVAYSQAQTRSADEPLTTFCECTVCGNRW 309
>gi|326525977|dbj|BAJ93165.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWR 80
E RC+DAL +++ + +LV+TQV + L + KHP+ IQ +A DL W+
Sbjct: 31 EAQRCLDALRRLREFRVNTDVLVATQVGKRLRYLTKHPNSDIQAMAADLFGYWK 84
>gi|327302438|ref|XP_003235911.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
gi|326461253|gb|EGD86706.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
Length = 832
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 140 IVREKLYDALSKVSDE------AADKVTI--DLVKACDPIQVAILVESAMYEKWCRSNG- 190
+ R ALSK+ E AA TI D K ++ +E MY C S G
Sbjct: 270 VARRSAATALSKLVTEIAGTAVAAGTFTIPSDSTKEAVGERLGTEIEDCMYRNLCGSTGE 329
Query: 191 ---MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
YK + R +LFN+ +N R +L+G P+ I MS + MAS +++
Sbjct: 330 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 379
>gi|296421697|ref|XP_002840401.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636616|emb|CAZ84592.1| unnamed protein product [Tuber melanosporum]
Length = 110
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Query: 199 LLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFP 258
L N+ +N + R +V+ G + P + M + EMAS + + + L ++ + T +
Sbjct: 4 LFLNLKSKDN-NLRNRVVSGEITPARLSTMESSEMASAQRRQADEKLMEEN-MRTAMMAK 61
Query: 259 VGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
S +SD CG+CG K+SY Q + D +T TC C+ W
Sbjct: 62 SEKS----ISDQLTCGKCGQKKVSYTQAQTRSADEPMTTFCTCEICSHRW 107
>gi|326479708|gb|EGE03718.1| PHD finger domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 833
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 140 IVREKLYDALSKVSDE------AADKVTI--DLVKACDPIQVAILVESAMYEKWCRSNG- 190
+ R ALSK+ E AA TI D K ++ +E MY C S G
Sbjct: 269 VARRSAATALSKLVTEIAGTAVAAGTFTIPSDSTKEAVGERLGTEIEDCMYRNLCGSTGE 328
Query: 191 ---MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
YK + R +LFN+ +N R +L+G P+ I MS + MAS +++
Sbjct: 329 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 378
>gi|326475222|gb|EGD99231.1| PHD finger domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 833
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 140 IVREKLYDALSKVSDE------AADKVTI--DLVKACDPIQVAILVESAMYEKWCRSNG- 190
+ R ALSK+ E AA TI D K ++ +E MY C S G
Sbjct: 269 VARRSAATALSKLVTEIAGTAVAAGTFTIPSDSTKEAVGERLGTEIEDCMYRNLCGSTGE 328
Query: 191 ---MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
YK + R +LFN+ +N R +L+G P+ I MS + MAS +++
Sbjct: 329 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 378
>gi|70953587|ref|XP_745885.1| transcription elongation factor s-ii [Plasmodium chabaudi chabaudi]
gi|56526345|emb|CAH78009.1| transcription elongation factor s-ii, putative [Plasmodium chabaudi
chabaudi]
Length = 364
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 177 VESAMYEKWCR---SNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
+E+ +Y+ + S Y + + + FN+SD +N +F K+ ++ T+ M++++M
Sbjct: 227 IENELYKIFIEKKNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDM 286
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRC-GHNKISYQHSSILDD 291
ASD+ + ++ L + V + K ++C +C G++ + Q + D
Sbjct: 287 ASDEKKNERQKCLQESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQLQTRSSD 346
Query: 292 YNLTRHVTCLNCNQYW 307
+T VTCL CN W
Sbjct: 347 EPMTTFVTCLKCNNRW 362
>gi|124511836|ref|XP_001349051.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
gi|23498819|emb|CAD50896.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
Length = 403
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 188 SNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
S Y + + + FN+SD +N +F KV + + + M++++MASD+ + +
Sbjct: 280 SQKEYNMQLKSIKFNLSDKKNPNFNEKVYSEFISSKALATMNSQDMASDEKKNERKKCLQ 339
Query: 248 DGALVTGHIFPV-GLSRKIIVSDIYECGRC-GHNKISYQHSSILDDYNLTRHVTCLNCNQ 305
+ L + V + K ++C +C G++ I +Q + D +T VTCL CN
Sbjct: 340 ESLLACQSDWDVKNILLKKSRKGEFQCFKCKGYDTIYHQLQTRSSDEPMTTFVTCLKCNN 399
Query: 306 YW 307
W
Sbjct: 400 RW 401
>gi|84998998|ref|XP_954220.1| transcription elongation factor [Theileria annulata]
gi|65305218|emb|CAI73543.1| transcription elongation factor, putative [Theileria annulata]
Length = 418
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 176 LVESAMYEKWC---RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
L+E ++Y + + Y + +C+ FN+ D +N F K+ + +I+MS+ +
Sbjct: 280 LIEKSLYNYYIIEKNNQKGYNQQLKCIGFNLKDNKNTIFNYKLYNNIISINELIHMSSLQ 339
Query: 233 MASDKIQLW-NHHLDK--DGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS--YQHSS 287
MASD+ +L N L++ + I + L+ K ++C +C ++KI+ YQ +
Sbjct: 340 MASDEKKLQRNEILEQSLEACQSDWEIKNIFLNNK--TKGQFKCNKC-NSKITTYYQLQT 396
Query: 288 ILDDYNLTRHVTCLNCNQYW 307
D +T VTCLNCN W
Sbjct: 397 RSSDEPMTTFVTCLNCNNRW 416
>gi|303285732|ref|XP_003062156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456567|gb|EEH53868.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 68/177 (38%), Gaps = 44/177 (24%)
Query: 163 DLVKACDPI-QVAILVESAMYEKWCR--SNGMYKFKYRCLLFNISDPENQDFRRKVLLGH 219
D V+ P+ ++ + +E A++E SNG Y+ + R + FN++ +N+ R L G
Sbjct: 93 DAVRDPSPLFELGVKIERALFEAHGEDASNGEYRARARSIAFNLA--KNESLRVGALAGD 150
Query: 220 VKPETIINMSAKEMASDKIQLWNHHLDK-----------DGALVTGHIFPVGLSRKIIVS 268
+ P TI M+ E+A++ ++ +++ DGA T
Sbjct: 151 IAPATIARMTPDELATEDMRNARKKMEERLTRKRTRTNMDGATET--------------- 195
Query: 269 DIYECGRCGHNKISYQHSSILDDYNLTRH-------------VTCLNCNQYWVSTNL 312
D + C C + Y + D + V CL C W + L
Sbjct: 196 DAFACAHCRSTRCQYLRVGQVRDLGKSETWGNKDAADDAKVLVRCLECQAEWNESTL 252
>gi|242764560|ref|XP_002340799.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218723995|gb|EED23412.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 875
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ + VE AMY C +G YK + R ++FN+ N R ++L G + P T+ M
Sbjct: 318 LGLSVEHAMYVNLCGGSGEPNDAYKNQLRSIMFNVK--ANSSLRDRLLSGSLAPSTLATM 375
Query: 229 SAKEMASDKIQ 239
S+++MAS++ Q
Sbjct: 376 SSQDMASEEQQ 386
>gi|320039752|gb|EFW21686.1| hypothetical protein CPSG_01843 [Coccidioides posadasii str.
Silveira]
Length = 848
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ +E AMY+ C +G Y+ + R +LFN+ +N R +L+G + P+ M
Sbjct: 318 LGFAIEQAMYQNLCGGSGEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKM 375
Query: 229 SAKEMASDKIQLWNHHLDKD 248
S ++MAS++++ + + ++
Sbjct: 376 STQDMASEELRQRDDEIKRE 395
>gi|302654552|ref|XP_003019080.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
gi|291182777|gb|EFE38435.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
Length = 833
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 140 IVREKLYDALSKVSDE------AADKVTI--DLVKACDPIQVAILVESAMYEKWCRSNG- 190
+ R ALSK+ E AA TI D K ++ +E MY C S G
Sbjct: 269 VARRSAATALSKLVTEIAGTAVAAGTFTIPSDSTKEAVGERLGTEIEDCMYRNLCGSAGE 328
Query: 191 ---MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
YK + R +LFN+ +N R +L+G P+ I MS + MAS +++
Sbjct: 329 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 378
>gi|396081166|gb|AFN82784.1| transcription elongation factor S-II [Encephalitozoon romaleae
SJ-2008]
Length = 252
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 165 VKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPET 224
+ C A+L + E + R++ R N+ D N R V G + P
Sbjct: 113 ISDCSNRYAALLAKQITNEIFERNSADIAKLVRSKCLNLKDKNNPVLCRMVYDGEISPSR 172
Query: 225 IINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY- 283
++M+++EM S+ ++ +++ ++ ++ + + +D+++C RCG K SY
Sbjct: 173 YVDMTSEEMKSESLR------NEEVKMIEVSLYECQIPTQKAETDMFKCNRCGERKCSYR 226
Query: 284 QHSSILDDYNLTRHVTCLNCNQYW 307
Q + D +T VTC C W
Sbjct: 227 QLQTRSGDEPMTTFVTC-ECGNKW 249
>gi|119193931|ref|XP_001247569.1| hypothetical protein CIMG_01340 [Coccidioides immitis RS]
gi|392863190|gb|EAS36089.2| PHD finger domain-containing protein [Coccidioides immitis RS]
Length = 849
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ +E AMY+ C +G Y+ + R +LFN+ +N R +L+G + P+ M
Sbjct: 319 LGFAIEQAMYQNLCGGSGEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKM 376
Query: 229 SAKEMASDKIQLWNHHLDKD 248
S ++MAS++++ + + ++
Sbjct: 377 STQDMASEELRQRDDEIKRE 396
>gi|303311679|ref|XP_003065851.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240105513|gb|EER23706.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 848
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ +E AMY+ C +G Y+ + R +LFN+ +N R +L+G + P+ M
Sbjct: 318 LGFAIEQAMYQNLCGGSGEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKM 375
Query: 229 SAKEMASDKIQLWNHHLDKD 248
S ++MAS++++ + + ++
Sbjct: 376 STQDMASEELRQRDDEIKRE 395
>gi|401825902|ref|XP_003887045.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
gi|392998203|gb|AFM98064.1| transcription elongation factor S-II [Encephalitozoon hellem ATCC
50504]
Length = 253
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTG 254
+ +CL N+ D N R+V G + P ++M+++EM S+ ++ +++ ++
Sbjct: 146 RSKCL--NLKDKNNPVLCRRVYDGEISPSRYVDMTSEEMKSESLR------NEEVKMIEV 197
Query: 255 HIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ + + +D+++C +CG K SY Q + D +T VTC C W
Sbjct: 198 SLYECQIPTQKAETDMFKCNKCGERKCSYRQLQTRSGDEPMTTFVTC-ECGNKW 250
>gi|82915268|ref|XP_729034.1| transcription elongation factor TFIIS.h [Plasmodium yoelii yoelii
17XNL]
gi|23485845|gb|EAA20599.1| transcription elongation factor TFIIS.h, putative [Plasmodium
yoelii yoelii]
Length = 366
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 188 SNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
S Y + + + FN+SD +N +F K+ ++ T+ M++++MASD+ + +
Sbjct: 243 SQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASDEKKNERQKCLQ 302
Query: 248 DGALVTGHIFPV-GLSRKIIVSDIYECGRC-GHNKISYQHSSILDDYNLTRHVTCLNCNQ 305
+ L + V + K ++C +C G++ + Q + D +T VTCL CN
Sbjct: 303 ESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQLQTRSSDEPMTTFVTCLKCNN 362
Query: 306 YW 307
W
Sbjct: 363 RW 364
>gi|302510146|ref|XP_003017033.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
gi|291180603|gb|EFE36388.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
Length = 833
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 140 IVREKLYDALSKVSDE------AADKVTI--DLVKACDPIQVAILVESAMYEKWCRSNG- 190
+ R ALSK+ E AA TI D K ++ +E MY C S G
Sbjct: 269 VARRSAATALSKLVTEIAGTAVAAGTFTIPSDSTKEAVGERLGTEIEDCMYRNLCGSAGE 328
Query: 191 ---MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
YK + R +LFN+ +N R +L+G P+ I MS + MAS +++
Sbjct: 329 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 378
>gi|68072123|ref|XP_677975.1| transcription elongation factor [Plasmodium berghei strain ANKA]
gi|56498287|emb|CAH96309.1| transcription elongation factor s-ii, putative [Plasmodium berghei]
Length = 365
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 177 VESAMYEKWCR---SNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
+E+ +Y+ + S Y + + + FN+SD +N +F K+ ++ T+ M++++M
Sbjct: 228 IENELYKIFIEKKNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDM 287
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRC-GHNKISYQHSSILDD 291
ASD+ + ++ L + V + K ++C +C G++ + Q + D
Sbjct: 288 ASDEKKNERQKCLQESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQLQTRSSD 347
Query: 292 YNLTRHVTCLNCNQYW 307
+T VTCL CN W
Sbjct: 348 EPMTTFVTCLKCNNRW 363
>gi|195579326|ref|XP_002079513.1| GD21972 [Drosophila simulans]
gi|194191522|gb|EDX05098.1| GD21972 [Drosophila simulans]
Length = 146
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 182 YEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
Y ++ ++ YK + R + N+ DP+N R + G V + + M+ +EMASD+++
Sbjct: 22 YSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKL 81
Query: 242 NHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTC 300
K+ A+ + V ++ +D+ +C +C +Y Q + D +T V C
Sbjct: 82 REKFVKE-AINDAQLATVQGTK----TDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMC 136
Query: 301 LNCNQYW 307
C W
Sbjct: 137 NECGNRW 143
>gi|296813901|ref|XP_002847288.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842544|gb|EEQ32206.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 867
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 177 VESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+E+ MY+ C S+G YK + R +LFN+ +N R +L+G P++I MS +
Sbjct: 344 IENCMYKNLCGSSGEPNDAYKTQLRTILFNVR--KNPSLRDSLLVGRTTPDSISTMSTQN 401
Query: 233 MASDKIQ 239
MAS +++
Sbjct: 402 MASQELR 408
>gi|432866827|ref|XP_004070955.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1340
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%)
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
+E+ M++ + ++ Y KYR ++FN+ DP+N+ +V+ G + P ++ MS K+M
Sbjct: 583 IETEMFDIFRNTDSKYMNKYRTIMFNLKDPKNKGLLYRVVHGEIGPFRLVRMSQKDM 639
>gi|402469030|gb|EJW04098.1| transcription elongation factor S-II [Edhazardia aedis USNM 41457]
Length = 305
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 165 VKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLL----FNISDPENQDFRRKVLLGHV 220
+K CD Q AI V + ++ R++ K K R L+ N+S+ N + + V G +
Sbjct: 166 IKECDFEQAAI-VAKKIVDELVRTD---KIKDRELVASKKLNLSNKANPELCQNVYNGTI 221
Query: 221 KPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNK 280
PE I M+ +EM S+ ++ + +D + L + + +++C RC +K
Sbjct: 222 SPERYIAMTIEEMKSEDLKKREEKMKQD------QLMDSQLPKLQADTTMFKCSRCKQSK 275
Query: 281 IS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+ YQ + D +T ++TC C W
Sbjct: 276 TTYYQLQTRSADEPMTNYITCCVCGHKW 303
>gi|158293023|ref|XP_314320.4| AGAP004866-PA [Anopheles gambiae str. PEST]
gi|157016907|gb|EAA09679.4| AGAP004866-PA [Anopheles gambiae str. PEST]
Length = 2109
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 177 VESAMYEKWCRSNGM-YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMAS 235
E M+ + + GM Y+ KYR L+FNI D +N +K+ ++P+ ++ M+A E+AS
Sbjct: 1292 TEREMFILFNKDTGMKYRAKYRSLVFNIKDRKNLSLFQKISEKLIEPKQLVRMTADELAS 1351
Query: 236 DKIQLW 241
++ W
Sbjct: 1352 QELAQW 1357
>gi|401422690|ref|XP_003875832.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492072|emb|CBZ27346.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 337
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLD------ 246
K ++ LLFNI D +N + RRKV+ G + E ++ M E+A+ +++ H++
Sbjct: 220 KDTFQTLLFNIKDTKNGELRRKVMEGELLVERLVTMDDLELANPELR---RHIEEKIEER 276
Query: 247 -KDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCN 304
KD L + + + S +++C CG S+ Q + D +T +TC CN
Sbjct: 277 SKDTNLSE-----IRKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCN 331
Query: 305 QYW 307
W
Sbjct: 332 TQW 334
>gi|315040700|ref|XP_003169727.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
gi|311345689|gb|EFR04892.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
Length = 849
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 140 IVREKLYDALSKVSDE------AADKVTI--DLVKACDPIQVAILVESAMYEKWCRSNG- 190
+ R ALSK+ E AA TI D K ++ +E MY C S+G
Sbjct: 285 VARRSAATALSKLVIEIAGAAVAAGTFTIPSDSTKETVGERLGAEIEDCMYRNLCGSSGE 344
Query: 191 ---MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
YK + R +LFN+ +N R +L+G P+ I MS + MAS +++
Sbjct: 345 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 394
>gi|398015843|ref|XP_003861110.1| transcription elongation factor, putative [Leishmania donovani]
gi|322499335|emb|CBZ34408.1| transcription elongation factor, putative [Leishmania donovani]
Length = 333
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK--DGA 250
K ++ LLFNI D +N + RRKV+ G + E ++ M E+A+ +++ H+++ +
Sbjct: 216 KDTFQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELR---KHIEEKIEER 272
Query: 251 LVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ + + + S +++C CG S+ Q + D +T +TC CN W
Sbjct: 273 SKDTNLSEIRKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQW 330
>gi|54304003|emb|CAH59746.1| transcription elongation factor A protein 2 (SII) [Homo sapiens]
Length = 86
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 177 VESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
+E ++ ++ YK + R + N+ D +N D RR VL G + P+ I M+++EMASD
Sbjct: 3 IEECIFRGVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASD 62
Query: 237 KIQ 239
+++
Sbjct: 63 ELK 65
>gi|339898310|ref|XP_003392533.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
gi|321399505|emb|CBZ08701.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
Length = 333
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK--DGA 250
K ++ LLFNI D +N + RRKV+ G + E ++ M E+A+ +++ H+++ +
Sbjct: 216 KDTFQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELR---KHIEEKIEER 272
Query: 251 LVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ + + + S +++C CG S+ Q + D +T +TC CN W
Sbjct: 273 SKDTNLSEIRKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQW 330
>gi|125597753|gb|EAZ37533.1| hypothetical protein OsJ_21863 [Oryza sativa Japonica Group]
Length = 1136
Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A +E ++ N YK K R LLFN+ D N R +VL G + P+ + +M+ +E
Sbjct: 323 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 382
Query: 233 MASDKIQLW 241
+AS ++ W
Sbjct: 383 LASKELSDW 391
>gi|389637312|ref|XP_003716294.1| transcription elongation factor S-II [Magnaporthe oryzae 70-15]
gi|351642113|gb|EHA49975.1| transcription elongation factor S-II [Magnaporthe oryzae 70-15]
Length = 304
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
++ +E A + + Y+ K R L N+ N+D + V G++ + M++ E+
Sbjct: 174 SVEIEQAAFVAYKGDTAEYRNKMRSLFSNLKS--NRDLAKGVFSGNIAASKFVVMTSDEL 231
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDY 292
S+ ++ L K+ + P+ + +SD EC +C K+SY Q + D
Sbjct: 232 KSNDLRKQEEELAKEN--MKKAQVPMA---ERSISDALECSKCKQKKVSYTQAQTRSADE 286
Query: 293 NLTRHVTCLNCNQYW 307
+T C C W
Sbjct: 287 PMTTFCECTVCGNRW 301
>gi|440467322|gb|ELQ36551.1| transcription elongation factor S-II [Magnaporthe oryzae Y34]
Length = 306
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
++ +E A + + Y+ K R L N+ N+D + V G++ + M++ E+
Sbjct: 174 SVEIEQAAFVAYKGDTAEYRNKMRSLFSNLKS--NRDLAKGVFSGNIAASKFVVMTSDEL 231
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDY 292
S+ ++ L K+ + P+ + +SD EC +C K+SY Q + D
Sbjct: 232 KSNDLRKQEEELAKEN--MKKAQVPMA---ERSISDALECSKCKQKKVSYTQAQTRSADE 286
Query: 293 NLTRHVTCLNCNQYW 307
+T C C W
Sbjct: 287 PMTTFCECTVCGNRW 301
>gi|428183234|gb|EKX52092.1| hypothetical protein GUITHDRAFT_133829 [Guillardia theta CCMP2712]
Length = 390
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 13/87 (14%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC----RSNG 190
++ R+++REKL DAL + D A D AI +E +MY+ SN
Sbjct: 251 NAVRDLIREKLCDALQ------PHVLPGDKYSALD---AAIAIEHSMYQYRFFGKDESNS 301
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLL 217
YK + R +LFN+ D +N D RR+V L
Sbjct: 302 RYKGRARSILFNLRDSKNPDLRRRVRL 328
>gi|119579237|gb|EAW58833.1| hCG1746234, isoform CRA_a [Homo sapiens]
Length = 160
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 187 RSN-GM-YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHH 244
R N GM YK + + + N++D +N D R+ G++ P+ + M+A+EMASD+++ + +
Sbjct: 39 RGNTGMKYKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDELKEMHKN 98
Query: 245 LDKDGALVTGHIFPVGLSRKIIVSDIYECGRC-GHNKISYQHSSILDDYNLTRHVTCLNC 303
L K+ A+ + G ++ D C +C N S Q + +T V C C
Sbjct: 99 LRKE-AIREHQMAKTGGTQ----PDSLTCAKCKKKNCTSTQVQACSAGEPMTTFVDCNEC 153
>gi|357607939|gb|EHJ65747.1| transcription elongation factor S-II [Danaus plexippus]
Length = 292
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKAC-DPIQVAILVESAMYEKWCRSNGMYK 193
D+ R RE L AL K+ E + AC P ++A +E +Y ++ ++ YK
Sbjct: 129 DAVRLKCRELLTQAL-KIDGENPN--------ACATPEELAEDLEECIYAEFKNTDMRYK 179
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK----DG 249
+ R + N+ DP+N R L G + + M+ +EMASD+++ K D
Sbjct: 180 NRVRSRVANLKDPKNPTLRTNFLNGVINAARLAKMTPEEMASDEMKKLREKFIKEAIDDA 239
Query: 250 ALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILDDYNLTRHVTCLNCNQYW 307
L T G +++ + C +N++ + S D +T V C C W
Sbjct: 240 QLATVQ----GTKTEMLKCGKCKKKNCTYNQLQTRSS----DEPMTTFVLCNECGNRW 289
>gi|397629130|gb|EJK69212.1| hypothetical protein THAOC_09547 [Thalassiosira oceanica]
Length = 286
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 119/318 (37%), Gaps = 78/318 (24%)
Query: 17 VAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLI 76
+AA EG E + +D L+++ + +T +L T + + + KH + A L+
Sbjct: 18 IAAPGGEGRNE--KILDILERLDKTDVTLSILTETLIGASVAKLKKHSDVDVSSAAAKLV 75
Query: 77 SSWRDMCWDVEDVEYVAVTKKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCNDS 136
W+ +V K + H + PKK +
Sbjct: 76 KKWK------------SVAKAS------------------HHPASAPKK---------EG 96
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE------------- 183
E R+ L ++ + ++TI+ C P L ESA+ +
Sbjct: 97 PSENPRQ-----LKRLPSAGSSEITIET--ECLPDLSKDLNESAVKQLCVARAGEVEDAI 149
Query: 184 -KWCRSN-GMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ-- 239
W R Y K R L+FN+ +N R +V+LG + E + M +E+A+ ++
Sbjct: 150 NSWSRGERKTYTEKVRSLVFNLK--KNGPLREQVILGQIVTEQLPKMPPEELATAEMNKE 207
Query: 240 --------LWNHHLDKDGALVTGHIFPV-GLSRKIIVSDIYECGRCGHNKISYQHSSILD 290
+ + LD + G I + G+ ++ + ++ CGRC K +
Sbjct: 208 RNAQAEKLMASRQLDWEKK-NEGKINEICGIKGDLLKASLFTCGRCKSTKTTSTQKQTRS 266
Query: 291 -DYNLTRHVTCLNCNQYW 307
D +T V CLNC W
Sbjct: 267 ADEPMTVFVLCLNCGNRW 284
>gi|261205282|ref|XP_002627378.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239592437|gb|EEQ75018.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 873
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ + +E AMY+ C G YK + R +LFN+ +N R +L+G + P+ + M
Sbjct: 300 LGLAIELAMYKHLCGGAGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATM 357
Query: 229 SAKEMASDKIQ 239
S ++MAS +++
Sbjct: 358 STQDMASKELR 368
>gi|239611404|gb|EEQ88391.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 873
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ + +E AMY+ C G YK + R +LFN+ +N R +L+G + P+ + M
Sbjct: 300 LGLAIELAMYKHLCGGAGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATM 357
Query: 229 SAKEMASDKIQ 239
S ++MAS +++
Sbjct: 358 STQDMASKELR 368
>gi|440479245|gb|ELQ60026.1| transcription elongation factor S-II [Magnaporthe oryzae P131]
Length = 275
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
++ +E A + + Y+ K R L N+ N+D + V G++ + M++ E+
Sbjct: 143 SVEIEQAAFVAYKGDTAEYRNKMRSLFSNLKS--NRDLAKGVFSGNIAASKFVVMTSDEL 200
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDY 292
S+ ++ L K+ + P+ + +SD EC +C K+SY Q + D
Sbjct: 201 KSNDLRKQEEELAKEN--MKKAQVPMA---ERSISDALECSKCKQKKVSYTQAQTRSADE 255
Query: 293 NLTRHVTCLNCNQYW 307
+T C C W
Sbjct: 256 PMTTFCECTVCGNRW 270
>gi|327348586|gb|EGE77443.1| PHD finger domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 897
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ + +E AMY+ C G YK + R +LFN+ +N R +L+G + P+ + M
Sbjct: 324 LGLAIELAMYKHLCGGAGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATM 381
Query: 229 SAKEMASDKIQ 239
S ++MAS +++
Sbjct: 382 STQDMASKELR 392
>gi|384495291|gb|EIE85782.1| hypothetical protein RO3G_10492 [Rhizopus delemar RA 99-880]
Length = 511
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 173 VAILVESAMYEKWC---RSNG-MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+A +ES M+ + R+ G +YK K+R LL N+ D NQ F+ +++ G + P +I M
Sbjct: 126 LAKSIESTMFSQLGDRGRTCGEVYKNKFRSLLHNLKDKANQTFQLRIVTGDLSPLELIKM 185
Query: 229 SAKEMASDKIQ 239
S+++MA+ +++
Sbjct: 186 SSEDMANPELK 196
>gi|157869975|ref|XP_001683538.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
gi|68126604|emb|CAJ04034.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
Length = 333
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK--DGA 250
K ++ LLFNI D +N + RRKV+ G + E ++ M E+A+ +++ H+++ +
Sbjct: 216 KDTFQTLLFNIKDSKNGELRRKVVEGELLVERLVTMDDLELANPELR---KHIEEKIEER 272
Query: 251 LVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
++ + + + S +++C CG S+ Q + D +T +TC CN W
Sbjct: 273 SKDTNLSEIRKAMRTSNSTLFKCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQW 330
>gi|429855994|gb|ELA30929.1| transcription elongation factor s-ii [Colletotrichum
gloeosporioides Nara gc5]
Length = 300
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK K R L N+ N++ V+ G + P+ + M+ +E+ S + Q +L ++ +
Sbjct: 186 YKEKVRSLFSNLKVKTNKELGVNVMEGKITPDRFVAMTQEELKSAE-QRKKENLLQEENM 244
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLNCNQYW 307
V ++ K I SD CG+C K+SY + D +T C C W
Sbjct: 245 KKAQ---VPMAEKSI-SDALTCGKCKQKKVSYSQAQTRSADEPMTTFCECTVCGNRW 297
>gi|189514890|ref|XP_001919157.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Danio rerio]
Length = 394
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 33/252 (13%)
Query: 81 DMCWDVEDVEYVAVTKKAK-LVENVKVEEVTNG-EERRHDS-----GNVPKKSISCMIKC 133
++C++ + T+ A+ L ++ E +T E R D+ +VP+ + C
Sbjct: 151 NLCFNASSKKLCIATESAESLQTQLEQESITPAVESNRSDTEESAQTSVPQNTNQHTTNC 210
Query: 134 NDS-FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
+ + R + ALS +++ D ++ +KA +A +E ++ R+ Y
Sbjct: 211 DSTALRSKCVHLILQALS--TNQQTDPGHMNKLKA-----LAENIELHVHALHGRNQHKY 263
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALV 252
KF R + N+ +P N R+ ++ G + P+ MS +EMA +K++ +
Sbjct: 264 KFHIRSKVANLKNPNNPHLRQGLISGQLTPDAFAQMSVEEMAGEKLRRLRE--TYTSLAI 321
Query: 253 TGHIFPVGLSRKIIVSDIYECGRCGH-----NKI--------SYQHSSILDDYNLTRHVT 299
+ H P + K ++ C +C +I S+ S D+ ++T +T
Sbjct: 322 SEHQLPETV--KGTPTNKVRCRQCDSMDCRVTQISRGTLFLPSWVQSGSADNDSMT-FMT 378
Query: 300 CLNCNQYWVSTN 311
C NC + W +N
Sbjct: 379 CANCGEQWYHSN 390
>gi|348541331|ref|XP_003458140.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Oreochromis niloticus]
Length = 323
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
YK R + N+ +P++ + +L G + PE MSA++MAS +++ G
Sbjct: 192 YKACVRSKVANLRNPKSGHLHQGLLSGSLSPEAFARMSAEDMASAELRQLREEYSSQG-- 249
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHN--KISYQHSSIL----------DDYNLTRHVT 299
V+ P G+ + ++ C RCG + +++ +L D + VT
Sbjct: 250 VSERQLPQGI--EGTRTEKIRCKRCGGSDCRVTQVSRGVLFLPAWVRQGGPDEDAMTFVT 307
Query: 300 CLNCNQYW 307
C C Q W
Sbjct: 308 CSGCGQQW 315
>gi|183234876|ref|XP_648942.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169800868|gb|EAL43551.2| hypothetical protein EHI_055430 [Entamoeba histolytica HM-1:IMSS]
gi|407039077|gb|EKE39445.1| transcription factor S-II (TFIIS) domain containing protein
[Entamoeba nuttalli P19]
gi|449704587|gb|EMD44802.1| transcription elongation factor SII, putative [Entamoeba
histolytica KU27]
Length = 171
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Query: 184 KWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNH 243
K+ N + F R +L + +N+ + V P +I MS +MA + ++
Sbjct: 49 KYKEDNEKFNFHLRQILAGLR--KNKKLVDNLCSKKVTPNELIEMSPDDMADEAVKEIKE 106
Query: 244 HLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNLTRHVTCLN 302
+ KD P+ +S KI ++ ++CG+CG KI + D +TR +TC +
Sbjct: 107 RIIKD---EEDKKKPIDIS-KIPDNNEFKCGKCGSRKIQETLAQTRSADEPMTRFLTCAS 162
Query: 303 CNQYW 307
C +W
Sbjct: 163 CGFFW 167
>gi|170057596|ref|XP_001864553.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877015|gb|EDS40398.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 895
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 177 VESAMYEKWCRSNGM-YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMAS 235
VE M+ + + G Y+ KYR L+FNI D +N +K+ ++ ++ M+ +E+AS
Sbjct: 352 VEEEMFGMFNKDTGTKYRAKYRSLVFNIKDRKNLSLFQKICEKRIEARQLVRMTPEELAS 411
Query: 236 DKIQLWNHHLDK 247
++ W + +K
Sbjct: 412 QELAQWRENENK 423
>gi|432109698|gb|ELK33774.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Myotis davidii]
Length = 352
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 139/358 (38%), Gaps = 74/358 (20%)
Query: 11 AAKRAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKH-PSQKIQ 69
AA+ + + + EG E+ + L +++ +T + L T V+R + +LK+ P+ ++
Sbjct: 8 AARASLIEQLLSEGKFEDLG--NHLTELETLHVTKEHLQQTHVVRVVYRVLKNCPTMALK 65
Query: 70 KLAYDLISSWRDMCWDV-----EDVEYVAVTKK--------------------------- 97
K A L+S W+ + D + ++ V K
Sbjct: 66 KKAKCLLSKWKALYNDPYFKPGDSPKFFPVGDKDKNSGLSYDSRPDETLGGSSSDPLLSS 125
Query: 98 ----AKLVENVKVEEVTNGEERRHD--SGNVPKKS---ISCMIKCNDSFREIVREKLYDA 148
AK E + E NG ER+ + G PK + S ++ R E LY+A
Sbjct: 126 QDAIAKAAEMLVPENSPNGMERKEEDVKGGDPKSTDQRSSELLPPAVPVRMKCTELLYEA 185
Query: 149 LSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPEN 208
L+ S E + +L ++ A +E ++ + ++ YK R + N+ +P N
Sbjct: 186 LTSSSTE---QPKAELWQS-----FAREIEEHVFTLYSKNLKKYKTCIRSKVANLKNPRN 237
Query: 209 QDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVS 268
+R +L G + P M+ +MAS +++ + G + H P +++
Sbjct: 238 SHLQRNLLSGTMSPREFAEMTVMDMASKELKELRDSYTESG--IQEHCLP-----QVMEG 290
Query: 269 DIYECGRCGHNKISYQHSSILD---------------DYNLTRHVTCLNCNQYWVSTN 311
E +C H + +++D D + +V C C Q W +N
Sbjct: 291 TQTEKIKCRHCEKFNCKVTVIDRGALFLPSWVRNSNPDEQMMTYVICNECGQQWYHSN 348
>gi|313768224|ref|YP_004061904.1| hypothetical protein MpV1_021c [Micromonas sp. RCC1109 virus MpV1]
gi|312598920|gb|ADQ90944.1| hypothetical protein MpV1_021c [Micromonas sp. RCC1109 virus MpV1]
Length = 171
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 190 GMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDG 249
+YK K+ + ++ D N ++ ++ +K +INM +E+ D L+ ++
Sbjct: 57 SIYKQKFLSIQKSLKD--NPKLKKSIIEKRLKSHDVINMRPEELCPD--GLYAKQIE--- 109
Query: 250 ALVTGHIFPVGLSRKIIVSD-IYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ I LSR+I D ++CGRC K +Y Q + D +T V+CLNC++ W
Sbjct: 110 TKIHKEIRKEYLSREIKNQDGFFKCGRCKSMKTTYYQLQTRSADEPMTTFVSCLNCDRNW 169
>gi|340375596|ref|XP_003386320.1| PREDICTED: PHD finger protein 3-like [Amphimedon queenslandica]
Length = 738
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 188 SNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
+N Y+ K R LLFN+ D +N+ +K+L G + + ++ MS +++AS ++ W
Sbjct: 447 TNQKYRVKCRSLLFNLKDTKNEGLFKKILCGELSTKQLVRMSPEQLASRELAEW 500
>gi|432094051|gb|ELK25843.1| Death-inducer obliterator 1 [Myotis davidii]
Length = 1848
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K + ++ D ++ + +VA +E M+ + ++ YK
Sbjct: 306 NSQIRQNIRRSLKEILWKRASDSDDL----MMTESEVGKVAFHIEKEMFNLFHVTDNRYK 361
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSA 230
KYR ++FN+ DP+NQ + L +T + A
Sbjct: 362 SKYRSIMFNLKDPKNQVMESRARLHQESKKTAVRQEA 398
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 134 NDSFREIVREKLYDALSK-VSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
N+ R+ +R L D L K VSD K+T V ++A +E M+ ++ Y
Sbjct: 635 NNQMRQNIRRSLTDILYKRVSDSDDLKMTESEVA-----RLAFAIEKEMFNLCLNTDSKY 689
Query: 193 KFKYRCLLFNISDPENQDFRRKVL 216
K KYR L+FN+ DP+ Q+ +L
Sbjct: 690 KRKYRSLMFNLKDPKKQNIFSSML 713
>gi|242096284|ref|XP_002438632.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
gi|241916855|gb|EER89999.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
Length = 732
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+A+ +E +++ + YK K R LLFN+ D N R +VL G + P+ + +M+ +E
Sbjct: 338 LALRIEEDLFQLCGGVSKKYKEKGRSLLFNLKDKSNPVLRGQVLSGEITPKCLCSMTTEE 397
Query: 233 MASDKI 238
+AS ++
Sbjct: 398 LASKEL 403
>gi|149024308|gb|EDL80805.1| transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 299
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 168 CDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
CD ++A +E+ +Y++ ++ Y+ + R + N+ DP N RR VL G + PE I
Sbjct: 212 CD--KLASEIETHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGTISPELIAK 269
Query: 228 MSAK 231
M+A+
Sbjct: 270 MTAE 273
>gi|154338127|ref|XP_001565288.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062337|emb|CAM42195.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 329
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD----KIQLWNHHLDKD 248
K ++ LLF+I D +N + RRKV+ G + E ++ M +E+A+ +I+ KD
Sbjct: 212 KDTFQTLLFSIKDSKNGELRRKVVEGELLVERLVTMDDRELANPELRKQIEEKMEERSKD 271
Query: 249 GALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
L + + + S +++C CG S+ Q + D +T +TC C+ W
Sbjct: 272 TNLSE-----IRKAMRTSNSTLFKCHVCGARDSSWEQRQTRSGDEPMTVIITCNKCSTQW 326
>gi|157115423|ref|XP_001652602.1| hypothetical protein AaeL_AAEL007181 [Aedes aegypti]
gi|108876924|gb|EAT41149.1| AAEL007181-PA, partial [Aedes aegypti]
Length = 1504
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
Y+ KYR L+FNI DP+N +K+ + + + M+ +E+AS ++ W + +K
Sbjct: 745 YRAKYRTLVFNIKDPKNLSLFQKICEKRIGAKQLARMTPEELASQELAQWRENENK 800
>gi|258575137|ref|XP_002541750.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902016|gb|EEP76417.1| predicted protein [Uncinocarpus reesii 1704]
Length = 888
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 181 MYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
MY+ C +G YK + R +LFN+ +N R +L+G + P+ MS ++MAS+
Sbjct: 364 MYQNLCGGSGEPNDAYKQQMRTILFNVR--KNPSLRDSLLVGRISPDAFSKMSTQDMASE 421
Query: 237 KIQLWNHHLDKD 248
+++ + + ++
Sbjct: 422 ELRQRDDEIKRE 433
>gi|449482931|ref|XP_004174984.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Taeniopygia
guttata]
Length = 381
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 115/253 (45%), Gaps = 50/253 (19%)
Query: 33 DALDQIKNSSITYQLLVSTQVIRHLLPMLKH-PSQKIQKLAYDLISSWRDM--------- 82
D L ++++ +T + L T+V + + +LK+ PS ++K A L+S W+ +
Sbjct: 49 DHLKELEDVDMTVEYLQGTEVTKAVYRVLKNCPSGALKKKAKQLLSRWKTLYKNNCAQSM 108
Query: 83 -------CWDVEDVEYVAVTKKAKLV-ENVKVEEVTNGEERRHDSGNVPKKSISCMIKCN 134
+ E++E+++V + +L+ E +E +G + +P +++ ++ C+
Sbjct: 109 PVKKSVSVYVKEEIEHLSVVPREQLLSEGPCQQEALDGTS---SNSLIPSQTVKNVV-CS 164
Query: 135 DSFREIVREKLYDALSKVSDEAA-----DKVTIDLVKA----CDPIQVAILVESAMYE-- 183
++ + R ++A V D++ + DL++A C + L++SA E
Sbjct: 165 NAEGRMNRLSSFEAQHTVDDDSKFVVGEASLQQDLMRALRCKCVDLLYKALIDSAKDEEE 224
Query: 184 --KW---------------CRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETII 226
KW +++ YK R + N+ +P++ + + G + P+
Sbjct: 225 TGKWLELAKEIEEHIFALHAKNDKKYKNCIRSKISNLKNPKSCHLKHNLFSGTLSPKAFA 284
Query: 227 NMSAKEMASDKIQ 239
M+ EMASD+++
Sbjct: 285 EMTVMEMASDELK 297
>gi|171473978|gb|AAW27827.2| SJCHGC09118 protein [Schistosoma japonicum]
Length = 309
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 75/191 (39%), Gaps = 29/191 (15%)
Query: 133 CNDSFREIVREK----LYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRS 188
C DS +R K L+ AL + + A+ T DL + I+V I A++ +
Sbjct: 124 CKDSSDLSLRTKCIQLLHGALDPETSKEAEGKTADLARV---IEVHI---HALHHA---N 174
Query: 189 NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKD 248
YK R + N+ +P+N R +L G + PE MS +EMA++++Q
Sbjct: 175 QAKYKACIRSKVTNLRNPKNGHLRCGLLGGSLGPEVFARMSLEEMANEELQRLREEYSSQ 234
Query: 249 GALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSS------------ILDDYNLTR 296
G V+ P G+ + + C RC + S D +
Sbjct: 235 G--VSERQLPQGV--EGTPTQKLRCRRCDGSDCRVTQVSRGTLFLPAWVRQATADQDAMT 290
Query: 297 HVTCLNCNQYW 307
VTC C + W
Sbjct: 291 FVTCSRCGEQW 301
>gi|300708584|ref|XP_002996468.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
gi|239605773|gb|EEQ82797.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
Length = 166
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI 256
R FN+ D N ++V G +KP+ I MS ++M S ++ +++ +
Sbjct: 59 RSKCFNLKDKNNPRICKEVYEGTIKPDEYILMSNEDMKSKDLK------EQERKAYEESL 112
Query: 257 FPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ + + +D+++C CG K SY Q + D +T VTC+ C W
Sbjct: 113 YDIQMPEIQAETDMFKCSTCGQRKSSYRQLQTRSADEPMTTFVTCV-CGHKW 163
>gi|167386526|ref|XP_001737794.1| transcription elongation factor S-II [Entamoeba dispar SAW760]
gi|165899246|gb|EDR25885.1| transcription elongation factor S-II, putative [Entamoeba dispar
SAW760]
Length = 171
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 176 LVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMAS 235
++ + K+ N + F R +L + +N+ + + P +I MS +MA
Sbjct: 41 MIGEGLAIKYKEDNEKFNFHLRQILAGLR--KNKKLVDSLCSKKITPNELIEMSPDDMAD 98
Query: 236 DKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQHSSILD-DYNL 294
+ ++ + KD P+ +S KI S+ ++C +CG KI + D +
Sbjct: 99 ETVKEIKERIIKDEE---DKKKPIDIS-KIPDSNEFKCSKCGSRKIQETLAQTRSADEPM 154
Query: 295 TRHVTCLNCNQYW 307
TR +TC +C +W
Sbjct: 155 TRFLTCASCGFFW 167
>gi|66816447|ref|XP_642233.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
gi|74856708|sp|Q54YG9.1|TCEA1_DICDI RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor tf2s
gi|60470313|gb|EAL68293.1| RNA polymerase II elongation factor [Dictyostelium discoideum AX4]
Length = 319
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 119/331 (35%), Gaps = 59/331 (17%)
Query: 14 RAAVAAVWKEGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAY 73
R + K+G ++A ++ L KN IT LL ST + + + + H I +
Sbjct: 8 REQLEKAIKDGEFDKA--LECLKNAKNFKITKDLLKSTDIGKSVGKLRAHKDIGISSQSK 65
Query: 74 DLISSWRDMCWDVEDVEYVAVT------------------------KKAKLVENVKVEEV 109
+LI W+ D+E + K+ + E+
Sbjct: 66 ELIDKWK---QDIEGTSATTTSSSSSSSSSTTSTTTTKTASPSESLKRKSISEDTSDRPT 122
Query: 110 TNG---EERRHDSGNVPKKS-------ISCMIKCNDSFREIVREKLYDALSKVSDEAADK 159
+ E ++ PK S I+ + N R + +AL+ +DE
Sbjct: 123 SKPLLQENKKISPPTTPKTSSPPIASLIAPITGANADLRNKTIQLFVEALTTDNDETMSP 182
Query: 160 VTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGH 219
P +A+ +E+ MY+ + + YK K R FN+ +N R +L
Sbjct: 183 ----------PEDIAVEIEAEMYDIYRGVSKEYKEKLRSFKFNLK--KNDILRLSLLNRQ 230
Query: 220 VKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHN 279
+ +M MASD ++ LDK +G + + +D ++CG+C
Sbjct: 231 ISVAKFCSMDIYSMASDDLKEERKKLDK----FNTEASMLGQNNE-ATTDQFQCGKCKQR 285
Query: 280 KISY-QHSSILDDYNLTRHVTCL--NCNQYW 307
K +Y Q + D T V C C W
Sbjct: 286 KCTYTQLQTRSADEPPTTFVKCCVKGCGNRW 316
>gi|224042778|ref|XP_002197835.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Taeniopygia
guttata]
Length = 360
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 115/253 (45%), Gaps = 50/253 (19%)
Query: 33 DALDQIKNSSITYQLLVSTQVIRHLLPMLKH-PSQKIQKLAYDLISSWRDM--------- 82
D L ++++ +T + L T+V + + +LK+ PS ++K A L+S W+ +
Sbjct: 28 DHLKELEDVDMTVEYLQGTEVTKAVYRVLKNCPSGALKKKAKQLLSRWKTLYKNNCAQSM 87
Query: 83 -------CWDVEDVEYVAVTKKAKLV-ENVKVEEVTNGEERRHDSGNVPKKSISCMIKCN 134
+ E++E+++V + +L+ E +E +G + +P +++ ++ C+
Sbjct: 88 PVKKSVSVYVKEEIEHLSVVPREQLLSEGPCQQEALDGTS---SNSLIPSQTVKNVV-CS 143
Query: 135 DSFREIVREKLYDALSKVSDEAA-----DKVTIDLVKA----CDPIQVAILVESAMYE-- 183
++ + R ++A V D++ + DL++A C + L++SA E
Sbjct: 144 NAEGRMNRLSSFEAQHTVDDDSKFVVGEASLQQDLMRALRCKCVDLLYKALIDSAKDEEE 203
Query: 184 --KW---------------CRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETII 226
KW +++ YK R + N+ +P++ + + G + P+
Sbjct: 204 TGKWLELAKEIEEHIFALHAKNDKKYKNCIRSKISNLKNPKSCHLKHNLFSGTLSPKAFA 263
Query: 227 NMSAKEMASDKIQ 239
M+ EMASD+++
Sbjct: 264 EMTVMEMASDELK 276
>gi|219110209|ref|XP_002176856.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411391|gb|EEC51319.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1960
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGM-- 191
N SFR+ R+ AL K + +V+ D + ++ A +E A+++++ R G
Sbjct: 1623 NGSFRQAGRQHFATALMKGLEHLGLQVSSDESRTLCALK-AEEIERALFDQFQRFVGEQA 1681
Query: 192 ----YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
YK + R + I+D N VL G V P ++ MS E+AS +++ H +K
Sbjct: 1682 ISPEYKRQARAIKAGIADKGNAKLCGGVLQGDVDPAILVRMSDDELASPQVRQEREHAEK 1741
Query: 248 DG 249
+
Sbjct: 1742 EA 1743
>gi|168060055|ref|XP_001782014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666505|gb|EDQ53157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 836
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 37/56 (66%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDM 82
+E+ + AL +++ I+ + L T++ + + + KHPS++++ LA DL+ SW+D+
Sbjct: 510 DESAILTALRTLEDMHISVEALKQTEIGKEVNALRKHPSKRVRSLAKDLVRSWKDL 565
>gi|226290806|gb|EEH46271.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 872
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ + +E AMY+ G YK + R +LFN+ +N R +L+G + P+ + M
Sbjct: 300 LGLAIEHAMYKHLSGGTGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTM 357
Query: 229 SAKEMASDKIQ 239
S +MAS +++
Sbjct: 358 STHDMASKELR 368
>gi|71051072|gb|AAH99524.1| Phf3 protein, partial [Mus musculus]
Length = 366
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW 241
FN+ DP+N +KVL G V P+ +I MS +E+AS ++ W
Sbjct: 1 FNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 41
>gi|444517013|gb|ELV11334.1| Death-inducer obliterator 1 [Tupaia chinensis]
Length = 1966
Score = 42.4 bits (98), Expect = 0.32, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + +VA+ +E M+ + ++ YK
Sbjct: 677 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGRVALHIEKEMFSLFHVTDNRYK 732
Query: 194 FKYRCLLFNISDPENQ 209
KYR ++FN+ DP+NQ
Sbjct: 733 SKYRSIMFNLKDPKNQ 748
>gi|295658648|ref|XP_002789884.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282845|gb|EEH38411.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 898
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ + +E AMY+ G YK + R +LFN+ +N R +L+G + P+ + M
Sbjct: 324 LGLAIEHAMYKHLSGGTGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTM 381
Query: 229 SAKEMASDKIQ 239
S +MAS +++
Sbjct: 382 STHDMASKELR 392
>gi|225682198|gb|EEH20482.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 897
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 173 VAILVESAMYEKWCRSNG----MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+ + +E AMY+ G YK + R +LFN+ +N R +L+G + P+ + M
Sbjct: 325 LGLAIEHAMYKHLSGGTGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTM 382
Query: 229 SAKEMASDKIQ 239
S +MAS +++
Sbjct: 383 STHDMASKELR 393
>gi|19075622|ref|NP_588122.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59800464|sp|Q9Y7V2.3|BYE1_SCHPO RecName: Full=Transcription factor bye1
gi|4539285|emb|CAB39909.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe]
Length = 721
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 173 VAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKE 232
+ +V S + N Y+ K+R L FN+ D +N FR +VL + ++N+S++E
Sbjct: 259 IMFMVLSYTTDHSLTPNNKYREKFRALRFNLVDDKNPAFRARVLKNEISFNDLVNLSSEE 318
Query: 233 MASDKIQ 239
MA+ ++
Sbjct: 319 MANPDLK 325
>gi|281207318|gb|EFA81501.1| hypothetical protein PPL_05490 [Polysphondylium pallidum PN500]
Length = 141
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 261 LSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
LSR +D ++CG+C K +Y Q + D LT VTC+NCN W
Sbjct: 23 LSRDAATTDQFQCGKCKQRKCTYFQLQTRSADEPLTTFVTCVNCNNRW 70
>gi|449015636|dbj|BAM79038.1| similar to transcription elongation factor TFIIS.h [Cyanidioschyzon
merolae strain 10D]
Length = 691
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 21/118 (17%)
Query: 124 KKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE 183
KK +S K + R+ R+ LY+AL VA +ESA++E
Sbjct: 203 KKRVSGDGKPVEPIRQKARQMLYEALRS--------------------PVAYEIESALFE 242
Query: 184 KW-CRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQL 240
+ + Y+ + R L+ N+ D N + R V+ G + P T+ M+++E+A ++++
Sbjct: 243 LMDHKVHDDYRARLRNLVANLRDQRNDELREAVISGSISPSTLCQMNSEELACKELRI 300
>gi|303277747|ref|XP_003058167.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460824|gb|EEH58118.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 920
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
Y K R L+FN+ DP N R +VL G + P+ + +S E+A +Q
Sbjct: 194 TYNAKARTLIFNLKDPSNPHLRGRVLRGELTPQVLCVLSPTELARKDLQ 242
>gi|297811087|ref|XP_002873427.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319264|gb|EFH49686.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 364
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 26 VEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
+ E ++ L +++ IT+Q L T + RH+ + KHPS +++LA L+ W++
Sbjct: 139 LSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETV 196
>gi|355784325|gb|EHH65176.1| Death-inducer obliterator 1 [Macaca fascicularis]
Length = 2156
Score = 42.0 bits (97), Expect = 0.42, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYK 193
N R+ +R L + L K +++ D + + + ++A+ +E M+ + ++ YK
Sbjct: 646 NSQIRQNIRRSLKEILWKRVNDSDDLIMTE----NEVGKIALHIEKEMFNLFQVTDNRYK 701
Query: 194 FKYRCLLFNISDPENQ 209
KYR ++FN+ DP+NQ
Sbjct: 702 SKYRSIMFNLKDPKNQ 717
>gi|9758963|dbj|BAB09406.1| unnamed protein product [Arabidopsis thaliana]
Length = 361
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
E ++ L +++ IT+Q L T + RH+ + KHPS +++LA L+ W++
Sbjct: 141 EESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETV 196
>gi|18416107|ref|NP_568218.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
gi|395406779|sp|F4KFC7.1|MD26C_ARATH RecName: Full=Probable mediator of RNA polymerase II transcription
subunit 26c
gi|332004072|gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis
thaliana]
Length = 353
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
E ++ L +++ IT+Q L T + RH+ + KHPS +++LA L+ W++
Sbjct: 141 EESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETV 196
>gi|114050769|ref|NP_001040406.1| transcription elongation factor S-II [Bombyx mori]
gi|95102774|gb|ABF51328.1| transcription elongation factor S-II [Bombyx mori]
Length = 288
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 16/175 (9%)
Query: 135 DSFREIVREKLYDALSKVSDEAADKVTIDLVKAC-DPIQVAILVESAMYEKWCRSNGMYK 193
D+ R RE L AL K + E ++ AC P ++A +E +Y ++ ++ YK
Sbjct: 125 DAVRLKCRELLTQAL-KAAGETSN--------ACGSPEELAEELEECIYAEFKNTDMRYK 175
Query: 194 FKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVT 253
+ R + N+ DP+N R G + + M+ +EMASD+++ K+ A+
Sbjct: 176 NRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKE-AIDD 234
Query: 254 GHIFPV-GLSRKIIVSDIYECGRCGHNKISYQHSSILDDYNLTRHVTCLNCNQYW 307
+ V G +++ + C +N++ + S D +T V C C W
Sbjct: 235 AQLATVQGTKTEMLKCGKCKKKNCTYNQLQTRSS----DEPMTTFVLCNECGNRW 285
>gi|16648730|gb|AAL25557.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
gi|20147241|gb|AAM10334.1| AT5g09850/MYH9_6 [Arabidopsis thaliana]
Length = 302
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
E ++ L +++ IT+Q L T + RH+ + KHPS +++LA L+ W++
Sbjct: 90 EESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETV 145
>gi|430810870|emb|CCJ31590.1| unnamed protein product, partial [Pneumocystis jirovecii]
gi|430814597|emb|CCJ28186.1| unnamed protein product [Pneumocystis jirovecii]
Length = 276
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 49/252 (19%), Positives = 103/252 (40%), Gaps = 50/252 (19%)
Query: 36 DQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVT 95
+Q+K ++ LL+ T++ + + + + + LA +++ W+ ED+ +
Sbjct: 21 NQMKEVIVSESLLIDTKLGITVGKLRNYSEKYVADLAKEIVKKWK------EDMSAMKSG 74
Query: 96 KKAKLVENVKVEEVTNGEERRHDSGNVPKKSISCMIKCN---DSFREIVREKLYDALSKV 152
KK L EN +T E ++ + S + I+ N D R+ +Y+AL
Sbjct: 75 KKVSLAENKTDTPITTSELSTPNTFEKTRDSTTDCIEKNITGDKVRDNCVHLIYNALVYG 134
Query: 153 SDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFR 212
S+E++ IL ++ +++ D N R
Sbjct: 135 SEESS---------------ATILSKAKAIDEY-------------------DKNNPTLR 160
Query: 213 RKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKI-IVSDIY 271
+ V+ G + M+ +EMAS ++D + ++F ++ I ++D++
Sbjct: 161 QNVVSGELSIPRFCTMTPQEMAS------KERREEDKKIEEMNLFNAQGAKPIKAITDLF 214
Query: 272 ECGRCGHNKISY 283
+CG+C K+SY
Sbjct: 215 QCGKCKQRKVSY 226
>gi|444520653|gb|ELV13035.1| PHD finger protein 3 [Tupaia chinensis]
Length = 1690
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 13/73 (17%)
Query: 136 SFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFK 195
S ++I+ ++L D+ KV +E A KV A +E ++ + ++ YK K
Sbjct: 649 SLKDILMKRLTDSNLKVPEEKAAKV-------------ATKIEKELFSFFRDTDAKYKNK 695
Query: 196 YRCLLFNISDPEN 208
YR L+FN+ DP+N
Sbjct: 696 YRSLMFNLKDPKN 708
>gi|159162262|pdb|1ENW|A Chain A, Elongation Factor Tfiis Domain Ii
Length = 114
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 137 FREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYE-KWCRSN-GMYKF 194
R+ V + LYD L+K S+ + + A +ES M + C +N YK
Sbjct: 22 LRDQVLKALYDVLAKESEHPPQSI----------LHTAKAIESEMNKVNNCDTNEAAYKA 71
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMA 234
+YR + N+ N D + K+ G + PE + AK++A
Sbjct: 72 RYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLA 111
>gi|213404362|ref|XP_002172953.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
gi|212001000|gb|EEB06660.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
Length = 698
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 165 VKACDPIQVAILVESAMY-------EKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLL 217
+K D ++ A+ +E M+ + N Y+ K+R + FN++D N R +
Sbjct: 199 LKFPDLVEFALQLERTMFIELSYKIDGNAIPNKAYRDKFRNIKFNLTDDRNPHLRASLFK 258
Query: 218 GHVKPETIINMSAKEMASDKIQLWNHHL 245
G + P +++M+++EMA+ ++++ +
Sbjct: 259 GEITPVQLVHMTSEEMANPDLKVFAEQI 286
>gi|359493121|ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
E +D L + + IT++ L T + RH+ + KHPS ++++L L+ W+D+
Sbjct: 120 EDSLVDLLQSLADMDITFKALKETDIGRHVNRLRKHPSNEVRRLVKQLVRKWKDLV 175
>gi|224060453|ref|XP_002300207.1| predicted protein [Populus trichocarpa]
gi|222847465|gb|EEE85012.1| predicted protein [Populus trichocarpa]
Length = 361
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWD 85
E +D L + + IT+Q L T + RH+ + KHPS +++L L+ W+++ D
Sbjct: 142 EDSLVDLLQSLADMDITFQALKETDIGRHVNRLRKHPSNDVKRLVKQLVRKWKEIVDD 199
>gi|312281771|dbj|BAJ33751.1| unnamed protein product [Thellungiella halophila]
Length = 348
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 27 EEARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
EEA ++ L +++ IT+Q L T + RH+ + KHPS +++LA L+ W++
Sbjct: 136 EEA-LVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETV 191
>gi|224126771|ref|XP_002329469.1| predicted protein [Populus trichocarpa]
gi|222870149|gb|EEF07280.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWD 85
E +D L + + IT+Q L T + RH+ + KHPS +++L L+ W+++ D
Sbjct: 142 EDSLVDLLQSLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKQLVRKWKEIVDD 199
>gi|164657949|ref|XP_001730100.1| hypothetical protein MGL_2482 [Malassezia globosa CBS 7966]
gi|159103995|gb|EDP42886.1| hypothetical protein MGL_2482 [Malassezia globosa CBS 7966]
Length = 899
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 170 PIQVAILVESAMYEKWCRSNGM--YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIIN 227
P + A +E+ ++ + + + YK K+R LLFN+ D N ++ G++ I++
Sbjct: 237 PHEYASQLEAELFRVYGQDPALRAYKEKFRSLLFNVKDHRNTSLHERITSGNLPAADIVH 296
Query: 228 MSAKEMASDKIQ 239
MS + +A+D I+
Sbjct: 297 MSNEALANDTIR 308
>gi|47229319|emb|CAG04071.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3036
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Query: 122 VPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAM 181
P S + N+ R+ +++ L L K + D T + + +++ +E M
Sbjct: 2097 APSAPSSRPSQPNNQIRQSIQKSLVSILVKRVGDCEDLKTSE----SEVVKLVASIEVEM 2152
Query: 182 YEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
+ + ++ Y KYR ++FN+ DP N+ + G + P ++ M+ K+M
Sbjct: 2153 FNIFRNTDSKYMNKYRTIMFNLKDPRNKGLLYGFVRGEISPFRLVRMTQKDM 2204
>gi|163954997|ref|YP_001648101.1| hypothetical protein OsV5_024r [Ostreococcus virus OsV5]
gi|163638446|gb|ABY27805.1| hypothetical protein OsV5_024r [Ostreococcus virus OsV5]
Length = 167
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 23/130 (17%)
Query: 187 RSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLD 246
R + MYK K+ L +N+ + + R ++ VK + +++M +E LW
Sbjct: 50 RFSNMYKHKFLQLQYNLRN--SPALNRWIIEKKVKSKDVVDMRPEE-------LW----- 95
Query: 247 KDGALVTG-------HIFPVGLSRKIIVSD-IYECGRCGHNKIS-YQHSSILDDYNLTRH 297
DG T + L+++I ++ + CGRC NK S YQ + D +T
Sbjct: 96 PDGPCATAIEDKIVKDLRKAYLAQEIKDTEGFFTCGRCKSNKTSYYQLQTRSADEPMTTF 155
Query: 298 VTCLNCNQYW 307
V+C NC++ W
Sbjct: 156 VSCHNCDRNW 165
>gi|393240426|gb|EJD47952.1| hypothetical protein AURDEDRAFT_86321, partial [Auricularia
delicata TFB-10046 SS5]
Length = 865
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Query: 177 VESAMYEKWCR--------SNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+E M+E + ++G YK ++R L FN+S + RR+++ G + + + NM
Sbjct: 235 LEHTMFEHYAEPDKNGNPHASGKYKERFRMLTFNLSKEDRVILRRRIVSGDLPADELANM 294
Query: 229 SAKEMASDKIQ 239
S+ ++AS++ +
Sbjct: 295 SSTDLASEETK 305
>gi|290994184|ref|XP_002679712.1| predicted protein [Naegleria gruberi]
gi|284093330|gb|EFC46968.1| predicted protein [Naegleria gruberi]
Length = 116
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 197 RCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGALVTGHI 256
R L N++ N DFR V + E + M ++MAS + Q K+ AL+
Sbjct: 8 RTLSRNLNASNNDDFRSNVYHSIIPIEQLPIMKVQDMASKEKQ-------KENALLQERK 60
Query: 257 FPVGLSRK--IIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYW 307
+ K + S ++ CG+C + + Y+ + D +T +TCL+C W
Sbjct: 61 LHNSMVAKPAAVESSMFRCGKCKKTQCTFYEMQTRSADEPMTAFITCLSCGNRW 114
>gi|300120315|emb|CBK19869.2| unnamed protein product [Blastocystis hominis]
Length = 214
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKD-GA 250
Y+ +R + FN+ +N+ L G ++ + + +M+A+EM SD ++ + ++
Sbjct: 99 YRQHFRDIRFNLE--KNRQLLGDWLFGELESKKLASMTAEEMMSDDVRKERETIKEEMFE 156
Query: 251 LVTGHIFPVGLSRKIIVSDIYECGRCGHNKISY-QHSSILDDYNLTRHVTCLNCNQYW 307
+ + K+ S ++C RCG +K Y Q + D +T C+NC + W
Sbjct: 157 AYQTDWYKTHMMNKL--SGGFKCRRCGSDKTQYMQKQTRSADEPMTVFFECMNCGKRW 212
>gi|389586162|dbj|GAB68891.1| transcription elongation factor [Plasmodium cynomolgi strain B]
Length = 405
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 134 NDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC---RSNG 190
ND R+ ++ L+ A SD+ ID K D + +E+ +++ + +S
Sbjct: 226 NDVLRDKAKQFLFKAFITGSDDNL-LYLIDRKKLND---IIYNIENELHKFFIEKKQSQK 281
Query: 191 MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASD 236
Y + + + FN+ D +N F K+ ++ P TI M+++EMASD
Sbjct: 282 EYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASD 327
>gi|403349966|gb|EJY74429.1| Transcription elongation factor, putative [Oxytricha trifallax]
Length = 538
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 11/122 (9%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y K R LLFN+SD +N + R K+L + + +++ K++AS+ W ++ L
Sbjct: 420 YSDKARSLLFNLSDSKNFELRFKILNQELSAQQLVHTDVKKLASE----WMKQKREESLL 475
Query: 252 VTGHIFPVGLSRKIIVSD-----IYECGRCGHNKISYQHSSI-LDDYNLTRHVTCLNCNQ 305
T + + +S +++C CG K Y I D +T V C +C
Sbjct: 476 RTLSMKRTDWDVQETLSQGEFQGMFQC-ECGSQKTGYIQLQIERADEPMTNFVYCYDCEN 534
Query: 306 YW 307
W
Sbjct: 535 RW 536
>gi|327268236|ref|XP_003218904.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Anolis carolinensis]
Length = 350
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 172 QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAK 231
Q A +E ++ ++ YK R + N+ +P+N + + +G + P+T MSA
Sbjct: 199 QTAEEIEQHIFALHAGNDRKYKNSIRSKVSNLKNPKNYHLKHSLHIGVLSPQTFAGMSAV 258
Query: 232 EMASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRC 276
EMA D+++ K V H P +S + ++ +C RC
Sbjct: 259 EMAHDELKQLRASYTKSA--VQEHQLPQRISGTL--TNKIKCRRC 299
>gi|403368207|gb|EJY83934.1| Transcription elongation factor, putative [Oxytricha trifallax]
Length = 538
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 11/122 (9%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y K R LLFN+SD +N + R K+L + + +++ K++AS+ W ++ L
Sbjct: 420 YSDKARSLLFNLSDSKNFELRFKILNQELSAQQLVHTDVKKLASE----WMKQKREESLL 475
Query: 252 VTGHIFPVGLSRKIIVSD-----IYECGRCGHNKISYQHSSI-LDDYNLTRHVTCLNCNQ 305
T + + +S +++C CG K Y I D +T V C +C
Sbjct: 476 RTLSMKRTDWDVQETLSQGEFQGMFQC-ECGSQKTGYIQLQIERADEPMTNFVYCYDCEN 534
Query: 306 YW 307
W
Sbjct: 535 RW 536
>gi|71032861|ref|XP_766072.1| transcription elongation factor SII [Theileria parva strain Muguga]
gi|68353029|gb|EAN33789.1| transcription elongation factor SII, putative [Theileria parva]
Length = 324
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Query: 177 VESAMYEKWCRSNG---MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
+E ++Y+ + N Y + +C+ FN+ D +N K+ + + + M++ +M
Sbjct: 187 MELSLYDHYVVENDNRKAYNQQLKCIAFNLKDVKNTILNYKLYNKMITVDELTRMTSLQM 246
Query: 234 ASDKIQLWNHHL---DKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKIS-YQHSSIL 289
ASD+ +L + + + I + L++K + ++C +C + YQ +
Sbjct: 247 ASDEKKLQRNEILEQSLEACQSDWAIKNIFLAKK--SAGQFKCNKCNSKVTTYYQLQTRS 304
Query: 290 DDYNLTRHVTCLNCNQYW 307
D +T VTCLNC W
Sbjct: 305 SDEPMTTFVTCLNCKNRW 322
>gi|395331739|gb|EJF64119.1| hypothetical protein DICSQDRAFT_100770 [Dichomitus squalens
LYAD-421 SS1]
Length = 1071
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 20/128 (15%)
Query: 129 CMIKCNDSFREIVREKLYDALSKVSDEAA------DKVTIDLVKA------CDPIQVAIL 176
C+ K + FR+I + A D+ A DK +L Q +
Sbjct: 227 CLTKLQELFRQIFTRYPFLAQRDEGDDTAGRSEQPDKKPEELTSEEKEQLEAKANQFGVE 286
Query: 177 VESAMYEKWCRSN--------GMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINM 228
+E+ MYE + + G YK ++R L FN+S + ++ H+ P+ + M
Sbjct: 287 LENCMYELYSEPDKSGKQVVGGKYKERFRMLTFNLSKADRVVLHMRIASSHITPKELSTM 346
Query: 229 SAKEMASD 236
S+ ++AS+
Sbjct: 347 SSTDLASE 354
>gi|147768575|emb|CAN60620.1| hypothetical protein VITISV_006169 [Vitis vinifera]
Length = 333
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDM 82
+D L + + IT++ L T + RH+ + KHPS +++L L+ W+D+
Sbjct: 129 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDL 179
>gi|225431398|ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
vinifera]
Length = 305
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDM 82
+D L + + IT++ L T + RH+ + KHPS +++L L+ W+D+
Sbjct: 129 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDL 179
>gi|296088637|emb|CBI37628.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
+D L + + IT++ L T + RH+ + KHPS +++L L+ W+D+
Sbjct: 129 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLV 180
>gi|359476965|ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
vinifera]
Length = 331
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 32 IDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
+D L + + IT++ L T + RH+ + KHPS +++L L+ W+D+
Sbjct: 129 VDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKDLV 180
>gi|168035960|ref|XP_001770476.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678184|gb|EDQ64645.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 592
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 46/121 (38%), Gaps = 22/121 (18%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKDGAL 251
Y K R L FN+ + N R++L ++P+ +INM+ E+ KDG L
Sbjct: 327 YNLKMRSLDFNVKN--NNVLARRLLSKELRPDAVINMTPAEL-------------KDGYL 371
Query: 252 VTGHIFPVGLSRKIIVSDIYECGRCGHNK---ISYQHSSILDDYNLTRHVTCLNCNQYWV 308
T + + C CG + I H S D Y L CL C W
Sbjct: 372 TTEREDQAPPEPEAMQMADVRCSICGEREVGVIDIIHVSYGDRYQL----ECLKCGNTWY 427
Query: 309 S 309
S
Sbjct: 428 S 428
>gi|260665894|ref|YP_003212848.1| hypothetical protein H665_p024 [Ostreococcus tauri virus 1]
gi|260160912|emb|CAY39612.1| hypothetical protein OTV1_024 [Ostreococcus tauri virus 1]
Length = 167
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 23/128 (17%)
Query: 189 NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKD 248
+ MYK K+ L +N+ + + R ++ VK + +++M +E LW D
Sbjct: 52 SNMYKHKFLQLQYNLRN--SPALNRWIVEKKVKSKDVVDMRPEE-------LW-----PD 97
Query: 249 GALVTG-------HIFPVGLSRKIIVSD-IYECGRCGHNKIS-YQHSSILDDYNLTRHVT 299
G T + L+++I ++ + CGRC NK S YQ + D +T V+
Sbjct: 98 GPCATAIEDKIVKDLRKAYLAQEIKDTEGFFTCGRCKSNKTSYYQLQTRSADEPMTTFVS 157
Query: 300 CLNCNQYW 307
C NC++ W
Sbjct: 158 CHNCDRNW 165
>gi|154344264|ref|XP_001568076.1| transcription elongation factor-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134065410|emb|CAM40841.1| transcription elongation factor-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 474
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 264 KIIVSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYWV 308
++ ++ +++CGRCG + Y+ + D T+++TCL+C W+
Sbjct: 427 RLNITALFKCGRCGKRHCTFYEQQTRSADEPTTKYITCLDCKNTWI 472
>gi|259147828|emb|CAY81078.1| Bye1p [Saccharomyces cerevisiae EC1118]
Length = 594
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 139 EIVREKLY------DALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
E + KLY D +S +S E A + +L KAC I+ L + +Y
Sbjct: 256 ETIEAKLYELPDGKDVIS-ISQEFAHNLEEELYKACLNIEFGTL------------DKIY 302
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
K R L N+ D +N + + V+ G + ++NM+A E+A+ +Q + DK
Sbjct: 303 TEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLVNMNASELANPDLQEFKEKRDK 357
>gi|349579558|dbj|GAA24720.1| K7_Bye1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 594
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 139 EIVREKLY------DALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
E + KLY D +S +S E A + +L KAC I+ L + +Y
Sbjct: 256 ETIEAKLYELPDGKDVIS-ISQEFAHNLEEELYKACLNIEFGTL------------DKIY 302
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
K R L N+ D +N + + V+ G + ++NM+A E+A+ +Q + DK
Sbjct: 303 TEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLVNMNASELANPDLQEFKEKRDK 357
>gi|170652914|sp|A6ZZW1.1|BYE1_YEAS7 RecName: Full=Transcription factor BYE1; AltName: Full=Bypass of
ESS1 protein 1
gi|151941541|gb|EDN59904.1| negative regulator of transcription elongation [Saccharomyces
cerevisiae YJM789]
Length = 594
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 139 EIVREKLY------DALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
E + KLY D +S +S E A + +L KAC I+ L + +Y
Sbjct: 256 ETIEAKLYELPDGKDVIS-ISQEFAHNLEEELYKACLNIEFGTL------------DKIY 302
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
K R L N+ D +N + + V+ G + ++NM+A E+A+ +Q + DK
Sbjct: 303 TEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLVNMNASELANPDLQEFKEKRDK 357
>gi|190409818|gb|EDV13083.1| negative regulator of transcription elongation [Saccharomyces
cerevisiae RM11-1a]
gi|256271938|gb|EEU06959.1| Bye1p [Saccharomyces cerevisiae JAY291]
gi|365764652|gb|EHN06174.1| Bye1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 594
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 139 EIVREKLY------DALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
E + KLY D +S +S E A + +L KAC I+ L + +Y
Sbjct: 256 ETIEAKLYELPDGKDVIS-ISQEFAHNLEEELYKACLNIEFGTL------------DKIY 302
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
K R L N+ D +N + + V+ G + ++NM+A E+A+ +Q + DK
Sbjct: 303 TEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLVNMNASELANPDLQEFKEKRDK 357
>gi|207343439|gb|EDZ70897.1| YKL005Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 540
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 139 EIVREKLY------DALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
E + KLY D +S +S E A + +L KAC I+ L + +Y
Sbjct: 202 ETIEAKLYELPDGKDVIS-ISQEFAHNLEEELYKACLNIEFGTL------------DKIY 248
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
K R L N+ D +N + + V+ G + ++NM+A E+A+ +Q + DK
Sbjct: 249 TEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLVNMNASELANPDLQEFKEKRDK 303
>gi|357520437|ref|XP_003630507.1| hypothetical protein MTR_8g098290 [Medicago truncatula]
gi|355524529|gb|AET04983.1| hypothetical protein MTR_8g098290 [Medicago truncatula]
Length = 579
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 26/192 (13%)
Query: 132 KCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDP---IQVAILVESAMYEKWCRS 188
KC D I E D +++E+ DKV + P + + +E A+Y +
Sbjct: 350 KCGDRSDAINNEG-NDKSVGIANESKDKVPKNCKSFVWPDVAVPAVVALEKALYHTFSSD 408
Query: 189 NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDKD 248
Y K R L+FN+ + N R++L G ++P I+NM+ E+ K L + KD
Sbjct: 409 YQKYTQKLRQLVFNLKN--NAFLLRRLLNGELEPSKILNMTPTEL---KEGLTAEEISKD 463
Query: 249 GALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQ---HSSILDDYNLTRHVTCLNCNQ 305
H + ++D C C K+ + + D Y L C+ C
Sbjct: 464 EPDEPQH---------MQMTDA-RCKICDEQKVGVRDIIRAGYADRYML----ECIACGH 509
Query: 306 YWVSTNLSFGVL 317
W ++ + VL
Sbjct: 510 SWSASRDAVSVL 521
>gi|238604164|ref|XP_002396131.1| hypothetical protein MPER_03698 [Moniliophthora perniciosa FA553]
gi|215468105|gb|EEB97061.1| hypothetical protein MPER_03698 [Moniliophthora perniciosa FA553]
Length = 168
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 118 DSGNVPKKSISCMIKCNDSFREIVREKLY----DALSKVSDEAADKVTID-----LVKAC 168
DS P + C K D FR+I Y D + D + +++ D L +A
Sbjct: 7 DSSEDPTRKY-CRGKLEDLFRDIFLRYPYVRSTDGETGGGDNGSKELSEDEKNMVLAQAR 65
Query: 169 DPIQVAILVESAMYEKWCRSN--------GMYKFKYRCLLFNISDPENQDFRRKVLLGHV 220
Q A +E+ +YE + S+ YK ++R L FN+S P+ +++ +
Sbjct: 66 ---QFAGDLEACVYELYAESDKSGHSSAGPKYKDRFRTLQFNLSKPDRVMIHKRIASAQI 122
Query: 221 KPETIINMSAKEMASDKIQ 239
P+ + MS+ ++A+++++
Sbjct: 123 TPKELSGMSSTDLANEELK 141
>gi|397624121|gb|EJK67280.1| hypothetical protein THAOC_11713 [Thalassiosira oceanica]
Length = 2246
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
YK K R L FN+ DP+N +V++G + + +I+ SA+++AS ++
Sbjct: 2000 YKNKVRSLRFNLQDPKNPSLCARVIVGDMSIDELIDASAEDLASSALK 2047
>gi|351704572|gb|EHB07491.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 741
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 122 VPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAM 181
+PK S+ + R+I+R L + L K E+ D + + + AI +E M
Sbjct: 225 LPKPSV----QPESQLRQIIRHSLKEILWKRVCESGDLIRTENEVG----KTAIRLEEEM 276
Query: 182 YEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKV-LLGHVKPETIINMSAK 231
+ + ++ Y+ KYR ++ + DP +QD + + G + P+T+ + K
Sbjct: 277 FNLFRVTDHRYRSKYRSIMLRLKDPASQDLPDTIHIGGRIAPKTVWDYVGK 327
>gi|321454544|gb|EFX65711.1| hypothetical protein DAPPUDRAFT_32159 [Daphnia pulex]
Length = 338
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 201 FNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLW-----NHHLD 246
FNI DP+N RK++ + P ++ MS +E+AS ++ W H LD
Sbjct: 1 FNIKDPKNLGLFRKIIEKQITPGQLVKMSTEELASKELAEWREQEAKHQLD 51
>gi|401428110|ref|XP_003878538.1| transcription elongation factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494786|emb|CBZ30089.1| transcription elongation factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 476
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 267 VSDIYECGRCGHNKIS-YQHSSILDDYNLTRHVTCLNCNQYWV 308
++ +++CGRCG + Y+ + D T+++TCL+C W
Sbjct: 432 ITSLFKCGRCGKRHCTFYEQQTRSADEPTTKYITCLDCKNIWT 474
>gi|398364821|ref|NP_012921.3| Bye1p [Saccharomyces cerevisiae S288c]
gi|549655|sp|P36106.1|BYE1_YEAST RecName: Full=Transcription factor BYE1; AltName: Full=Bypass of
ESS1 protein 1
gi|485977|emb|CAA81837.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285813255|tpg|DAA09152.1| TPA: Bye1p [Saccharomyces cerevisiae S288c]
gi|392298137|gb|EIW09235.1| Bye1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 594
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 139 EIVREKLY------DALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
E + KLY D +S +S E A + +L KAC ++ L + +Y
Sbjct: 256 ETIEAKLYELPDGKDVIS-ISQEFAHNLEEELYKACLNVEFGTL------------DKIY 302
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
K R L N+ D +N + + V+ G + ++NM+A E+A+ +Q + DK
Sbjct: 303 TEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLVNMNASELANPDLQEFKEKRDK 357
>gi|357481593|ref|XP_003611082.1| BAH and coiled-coil domain-containing protein [Medicago truncatula]
gi|355512417|gb|AES94040.1| BAH and coiled-coil domain-containing protein [Medicago truncatula]
Length = 596
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 74/209 (35%), Gaps = 33/209 (15%)
Query: 114 ERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTIDLVKACDPIQV 173
E+ SGN I K ND EI + S K + V +
Sbjct: 343 EKEKGSGNAESDEIKN--KSNDRTSEIAND---------SQNKGQKSSESFVWPDAAVSA 391
Query: 174 AILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEM 233
+ +E A +E + Y K R L FN+ + N R++L G +KP I+NM+ E+
Sbjct: 392 IVALEKASHEAFSTDFQKYNQKLRQLDFNLKN--NALLARRLLNGELKPSKILNMTPIEL 449
Query: 234 ASDKIQLWNHHLDKDGALVTGHIFPVGLSRKIIVSDIYECGRCGHNKISYQ---HSSILD 290
K+G ++ + C RC +K+ + H+ D
Sbjct: 450 -------------KEGLTAEEKTKKEPDEKQHMQMTDARCSRCTDSKVGLREIIHAGHDD 496
Query: 291 DYNLTRHVTCLNCNQYWVSTNLSFGVLPI 319
Y L C+ C W ++ L I
Sbjct: 497 RYQL----ECVACGNSWYASRNEVSALTI 521
>gi|431909796|gb|ELK12942.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Pteropus alecto]
Length = 352
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 89 VEYVAVTKKAKLVENVKVEEVTNGEERRHD--SGNVPKKSISCMIKCNDSFREIVREKLY 146
E +A VE K E V+ G+ + D S + ++ KC EI+RE L
Sbjct: 133 TEMIAPESGPSQVE-PKEEHVSGGDPKSTDKRSSELLDPAVPVRTKCT----EILREAL- 186
Query: 147 DALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDP 206
+ + D+ DL + +A +E ++ + ++ YK R + N+ +P
Sbjct: 187 ------TSSSTDQPQADLWHS-----LAREIEGHIFTLYSKNLKKYKACIRSKVANLKNP 235
Query: 207 ENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
+N ++ +L G + P M+ EMAS++++
Sbjct: 236 KNSHLQQNLLSGTMSPREFAEMTVMEMASNELK 268
>gi|324512512|gb|ADY45182.1| Transcription elongation factor A protein 3 [Ascaris suum]
Length = 256
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 108 EVTNGEERRHDSGNV--PKKS--ISCMIKCNDSFREIVREKLYDALSKVSDEAADKVTID 163
E T + RR S NV P +S IS N+ E++REK L K
Sbjct: 99 EPTGSKRRRATSSNVEMPTRSPRISTKGSDNNDDEEVIREKCIAMLLKC----------- 147
Query: 164 LVKACDPIQVAILVESAMYEKWCRSNG-MYKFKYRCLLFNISDPENQDFRRKVLLGHVKP 222
+ + ++A VE A++ + +N Y+ + R + N++ N +++L G + P
Sbjct: 148 MGSSKKAEEIAKKVELAIFNEIGDANDHKYRSRVRSRVANLT--RNPAIGKQILDGVISP 205
Query: 223 ETIINMSAKEMASDKIQLWNHHLDKDGALVT---GHIFPVGLSRKIIVSD 269
E M+A+E+A+ +++ HL +G +V G VG II SD
Sbjct: 206 EKFARMTAEELATPQLRELREHLS-EGTMVEHMMGEKEAVG-GENIIKSD 253
>gi|300234|gb|AAC60551.1| RNA polymerase II elongation factor homolog [Saccharomyces
cerevisiae]
Length = 505
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 139 EIVREKLY------DALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMY 192
E + KLY D +S +S E A + +L KAC ++ L + +Y
Sbjct: 167 ETIEAKLYELPDGKDVIS-ISQEFAHNLEEELYKACLNVEFGTL------------DKIY 213
Query: 193 KFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQLWNHHLDK 247
K R L N+ D +N + + V+ G + ++NM+A E+A+ +Q + DK
Sbjct: 214 TEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLVNMNASELANPDLQEFKEKRDK 268
>gi|344254957|gb|EGW11061.1| Death-inducer obliterator 1 [Cricetulus griseus]
Length = 803
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 172 QVAILVESAMYEKWCRSNGMYKFKYRCLLFNISDPENQ 209
++A+ +E M+ + ++ YK KYR ++FN+ DP+NQ
Sbjct: 740 KIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQ 777
>gi|299116198|emb|CBN74547.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 1752
Score = 38.1 bits (87), Expect = 6.0, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 28/144 (19%)
Query: 98 AKLVENVKVEEV-TNGEERRHDSGNVPKKSISCMIKCNDSFREIVREKLYDALSKVSDEA 156
AK +E V+ T G+ RH K D FRE+ D ++++ +A
Sbjct: 1026 AKGLEAVRARSAQTAGQRFRH--------------KVMDRFREL----FADGMAELGVDA 1067
Query: 157 ADKVTIDLVKACDPIQVAILVESAMYEKWCRSN-GMYKFKYRCLLFNISDPENQDFRRKV 215
AD + + A D +E + + R+N G+YK K + L FNI +N + + +
Sbjct: 1068 ADAAVLCGMLAWD-------LEHEL-NAFSRTNRGVYKEKAQSLRFNIKFAKNPELFKDL 1119
Query: 216 LLGHVKPETIINMSAKEMASDKIQ 239
L G +T+ MS E+AS ++
Sbjct: 1120 LSGGTSMKTLCGMSTDELASSHLK 1143
>gi|449448454|ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
gi|449528150|ref|XP_004171069.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
Length = 345
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
E ++ L + + IT+Q L T + RH+ + KHPS +++L L+ W+++
Sbjct: 133 EDALVELLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKHLVRKWKEIV 188
>gi|343172619|gb|AEL99013.1| transcription elongation factor (TFIIS) family protein, partial
[Silene latifolia]
Length = 278
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 31 CIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
+D L + + IT++ L T + RH+ + KHPS +++L L+ W+D+
Sbjct: 75 LVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRQLVKLLVRKWKDLV 127
>gi|428184331|gb|EKX53186.1| hypothetical protein GUITHDRAFT_132948 [Guillardia theta CCMP2712]
Length = 1089
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 138 REIVREKLYDALSKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWC---RSNGMYKF 194
RE V K+ +AL + DE ADK T + QVA S++ R+ Y
Sbjct: 982 REKVVVKMLNAL--LQDEGADKGTATSIAKEIEYQVASSSISSVAAGVGGGDRARAWYNQ 1039
Query: 195 KYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKI 238
K R LLFN+ DP N R++VL + P +++ ++A+ +
Sbjct: 1040 KVRQLLFNLRDPRNDALRKQVLSSELPPSSLVVADPAKLANSDL 1083
>gi|343172617|gb|AEL99012.1| transcription elongation factor (TFIIS) family protein, partial
[Silene latifolia]
Length = 278
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 31 CIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMC 83
+D L + + IT++ L T + RH+ + KHPS +++L L+ W+D+
Sbjct: 75 LVDLLQTLADMDITFKALKETDIGRHVNRLRKHPSNDVRQLVKLLVRKWKDLV 127
>gi|388855201|emb|CCF51095.1| uncharacterized protein [Ustilago hordei]
Length = 1089
Score = 37.7 bits (86), Expect = 6.8, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 174 AILVESAMYEKWCRSNG-------MYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETII 226
A L+E ++E +G YK ++R LF++ D +N ++ G +K +
Sbjct: 362 AALLEEELFETNADLHGSIRIVGTKYKDRFRTFLFSLKDAKNTTLHSRIATGDLKASELA 421
Query: 227 NMSAKEMASDKIQ 239
MS +E+A+D I+
Sbjct: 422 KMSNEELANDAIR 434
>gi|403356500|gb|EJY77845.1| transcription elongation factor s-ii, putative [Oxytricha
trifallax]
Length = 618
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 171 IQVAILVESAMYEKWCRS-NGMYKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMS 229
+ +A+ +ES M+ + S + Y KYR L + + EN + R K+L+G ++P + ++S
Sbjct: 340 MNLALNIESHMWVLYDESISKEYSSKYRQLHTALRNDENYELRLKILMGEIEPSQVPDLS 399
Query: 230 AKEMASDKIQ 239
++AS KIQ
Sbjct: 400 VNDLAS-KIQ 408
>gi|242084884|ref|XP_002442867.1| hypothetical protein SORBIDRAFT_08g004100 [Sorghum bicolor]
gi|241943560|gb|EES16705.1| hypothetical protein SORBIDRAFT_08g004100 [Sorghum bicolor]
Length = 348
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWD 85
E + L + + ITY+ L T + RH+ + KHPS ++++L L+ W+++ D
Sbjct: 125 EDEMVSLLQNLADMDITYKALQDTDIGRHVNGLRKHPSSEVRQLVKLLVRKWKEIVDD 182
>gi|149638336|ref|XP_001515301.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Ornithorhynchus
anatinus]
Length = 359
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 141 VREKLYDAL-SKVSDEAADKVTIDLVKACDPIQVAILVESAMYEKWCRSNGMYKFKYRCL 199
VR K L ++D ++D+ +D + ++A +E +Y + ++ YK R
Sbjct: 181 VRHKAVGLLHGALTDSSSDQSKVDQGQ-----KLAREIEEHIYALYSKTIKKYKNCIRSK 235
Query: 200 LFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDKIQ 239
+ N+ +P+N ++ + G + PE M+ +MASD+++
Sbjct: 236 VSNLRNPKNVHLQQNLFSGSLTPEAFAEMTVMDMASDELK 275
>gi|297822507|ref|XP_002879136.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297826173|ref|XP_002880969.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297324975|gb|EFH55395.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297326808|gb|EFH57228.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 324
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 5 VMDLCEAAKRAAVAAVWK---EGVVEEARCIDALDQIKNSSITYQLLVSTQVIRHLLPML 61
++ L EAAK+AA A K G E +RC+DAL + +IT + +++ L +
Sbjct: 222 MVKLFEAAKKAADVANAKGVLSGKAEASRCVDALSLLMEINITPKPKEPRRMMDKLEGLT 281
Query: 62 KHPSQKIQKLAYDLISSWRDMCWDVEDVEYVAVT 95
KH +KI A L+ WR + E E T
Sbjct: 282 KHKDRKICHAASALLHLWRQRIREQERKESSTKT 315
>gi|115487514|ref|NP_001066244.1| Os12g0165700 [Oryza sativa Japonica Group]
gi|108862239|gb|ABA95889.2| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113648751|dbj|BAF29263.1| Os12g0165700 [Oryza sativa Japonica Group]
gi|125535897|gb|EAY82385.1| hypothetical protein OsI_37597 [Oryza sativa Indica Group]
Length = 340
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWD 85
E + L + + ITY+ L T + RH+ + KHPS ++++L L+ W+++ D
Sbjct: 118 EDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVRKWKEIVDD 175
>gi|390596600|gb|EIN06001.1| hypothetical protein PUNSTDRAFT_145392 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 995
Score = 37.4 bits (85), Expect = 8.6, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 192 YKFKYRCLLFNISDPENQDFRRKVLLGHVKPETIINMSAKEMASDK 237
YK ++R L FN+S P+ ++ H+ P+ + MS+ ++AS++
Sbjct: 328 YKDRFRTLTFNLSQPDRVVLHERIASSHLNPKELSQMSSTDLASEE 373
>gi|108862240|gb|ABA95890.2| transcription elongation factor, putative, expressed [Oryza sativa
Japonica Group]
Length = 334
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 28 EARCIDALDQIKNSSITYQLLVSTQVIRHLLPMLKHPSQKIQKLAYDLISSWRDMCWD 85
E + L + + ITY+ L T + RH+ + KHPS ++++L L+ W+++ D
Sbjct: 118 EDELVSLLQSLADMDITYKALQETDIGRHVNGLRKHPSGEVRQLVKLLVRKWKEIVDD 175
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,773,612,082
Number of Sequences: 23463169
Number of extensions: 182703885
Number of successful extensions: 457899
Number of sequences better than 100.0: 928
Number of HSP's better than 100.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 239
Number of HSP's that attempted gapping in prelim test: 456490
Number of HSP's gapped (non-prelim): 1092
length of query: 319
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 177
effective length of database: 9,027,425,369
effective search space: 1597854290313
effective search space used: 1597854290313
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)