BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020976
(319 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C043|PP318_ARATH Putative pentatricopeptide repeat-containing protein At4g17915
OS=Arabidopsis thaliana GN=At4g17915 PE=3 SV=1
Length = 463
Score = 324 bits (830), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 157/314 (50%), Positives = 223/314 (71%), Gaps = 1/314 (0%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P T+N++L+ LCK Y DNAL +F+ +Q F PEL+TYNILI GLCK+ R+ TA+
Sbjct: 150 LNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKPELMTYNILINGLCKSRRVGTAK 208
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
W+L EL SG+ PNA+TYTTI+K F+ R+ + GL++ MKR+GYT+DG+ Y V++A
Sbjct: 209 WMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSAL 268
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+K GR KEA +YM+++V G + DIVSYNTL+NLY K+G L+A LL E+E++G + D+
Sbjct: 269 IKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADE 328
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
YTHTI+++GL + G + A H M ++G NL NC+VD L K G +D A+ FES
Sbjct: 329 YTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTCNCLVDGLCKAGHVDRAMRYFES 388
Query: 246 MEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
MEVKD +TY+S+VHNLCK R ASKLLLSC G++I SA++AV+ GLR SGC EA
Sbjct: 389 MEVKDEYTYTSVVHNLCKDMRFVCASKLLLSCYNKGIKIPTSARRAVLSGLRMSGCYGEA 448
Query: 306 KKIQSKIRMAKISH 319
+K ++++++ + +
Sbjct: 449 RKAKAEMKLTLVGN 462
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 10 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 69
T NI ++ LCK R + A + + G P++VTYN LI G C+ + A + +
Sbjct: 13 TRLLNICVDSLCKFRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTR 72
Query: 70 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 129
+ D+G P+ TY +++ R L + M G D + Y T++ + K+G
Sbjct: 73 RMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLG 132
Query: 130 RLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 188
+ +EA + + + G+ +YN L++ CK G ++ A L EM+ + F+ + T+
Sbjct: 133 KHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKPELMTY 191
Query: 189 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 248
ILI+GLCK+ + A+ L + K G+ N Y I+ K +I + +F M+
Sbjct: 192 NILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKR 251
Query: 249 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 283
+ D + Y ++V L K R A + + ++ G R
Sbjct: 252 EGYTYDGYAYFAVVSALIKTGRTKEAYEYMQELVRKGRR 290
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 148/306 (48%), Gaps = 8/306 (2%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+N +++G C+ + A + R ++ G P++ TYN LI G + L ++
Sbjct: 46 PDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYL 105
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL-SAMKRKGYTFDGFGYCTVIAAFV 126
E+ + G P+ +Y T+M C F+ K++ +L ++ G Y ++ A
Sbjct: 106 FDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALC 165
Query: 127 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 186
K G + A + ++M + + ++++YN LIN CK ++ A +L E++K G+ +
Sbjct: 166 KCGYIDNALELFKEMQSR-FKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAV 224
Query: 187 THTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T+T ++ K I +G +L LE M + G+ + AY +V L K G+ A +
Sbjct: 225 TYTTILKLYFKTRRIRRGLQLFLE-MKREGYTYDGYAYFAVVSALIKTGRTKEAYEYMQE 283
Query: 246 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 301
+ K D +Y+++++ K L + LL + G++ + +V+GL +G
Sbjct: 284 LVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQ 343
Query: 302 RREAKK 307
R A++
Sbjct: 344 TRRAEE 349
>sp|Q56XR6|PP421_ARATH Pentatricopeptide repeat-containing protein At5g46680
OS=Arabidopsis thaliana GN=At5g46680 PE=2 SV=2
Length = 468
Score = 298 bits (763), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/311 (47%), Positives = 216/311 (69%), Gaps = 2/311 (0%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P T+NI+L+ LCK+ +TDNA+ +F+ L K PEL+TYNILI GLCK+ R+ +
Sbjct: 150 LVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVD 208
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
W+++EL SG+ PNA+TYTT++K F+ ++ + GL++ MK++GYTFDGF C V++A
Sbjct: 209 WMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSAL 268
Query: 126 VKIGRLKEATDYMEQMVTDGVQ-LDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
+K GR +EA + M ++V G + DIVSYNTL+NLY K+G L+A LL+E+E +G + D
Sbjct: 269 IKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPD 328
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
YTHTI+++GL GN GA HL + ++G ++ NC++D L K G +D A+ +F
Sbjct: 329 DYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFA 388
Query: 245 SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 304
SMEV+D FTY+S+VHNLCK RL ASKLLLSC G++I SA++AV+ G+R + +
Sbjct: 389 SMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQA 448
Query: 305 AKKIQSKIRMA 315
A+K KI+ A
Sbjct: 449 ARKTHIKIKAA 459
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 10 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 69
T NI +N LCK R + A + + G +P+++TYN LIKG + + A + +
Sbjct: 13 TKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTR 72
Query: 70 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 129
+ ++G P+ TY +++ +N L++ M G + D + Y T+++ + K+G
Sbjct: 73 RMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLG 132
Query: 130 RLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 188
R EA + E + G+ I +YN L++ CK G + A L + K + + T+
Sbjct: 133 RHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTY 191
Query: 189 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 248
ILI+GLCK+ + + + K G+ N Y ++ K +I+ + +F M+
Sbjct: 192 NILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 249 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 283
+ D F ++V L K R A + + ++SG R
Sbjct: 252 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTR 290
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 144/333 (43%), Gaps = 40/333 (12%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+N ++ G + D A + R +++ G P++ TYN LI G K L +
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI--------------------LSAMK 107
E+ SG +P+ +Y T+M C F+ ++ +I L A+
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALC 165
Query: 108 RKGYTFDGF---------------GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 152
+ G+T + Y +I K R+ M ++ G + V+
Sbjct: 166 KSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVT 225
Query: 153 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 212
Y T++ +Y K ++E L +M+K+G+ D + + ++ L K G + A + +
Sbjct: 226 YTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELV 285
Query: 213 KIGFDS-NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRL 267
+ G S ++ +YN +++ KDG +D ++ E +E+K D +T++ +V+ L
Sbjct: 286 RSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNT 345
Query: 268 PSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
A K L + G++ ++DGL +G
Sbjct: 346 GGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAG 378
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 169/312 (54%), Gaps = 8/312 (2%)
Query: 7 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 66
TP T+N+++NG+CK D A++ + G P ++T+NI+++ +C GR A
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 67 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAA 124
+L ++ G +P+ +T+ ++ F RK LG ++IL M + G + Y ++
Sbjct: 331 LLADMLRKGFSPSVVTFNILIN--FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 125 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
F K ++ A +Y+E+MV+ G DIV+YNT++ CK+GK+E A +L+++ +G
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
T+ +IDGL KAG A L+ M + Y+ +V L ++GK+D AI F
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 245 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
E ++ T++S++ LCK+++ A L+ + G + +++ +++GL + G
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 301 CRREAKKIQSKI 312
+EA ++ +++
Sbjct: 569 MAKEALELLNEL 580
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 159/310 (51%), Gaps = 7/310 (2%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+N+M++G CK +NAL + L + P++VTYN +++ LC +G+L+ A +
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L + P+ ITYT +++ R+ +++L M+ +G T D Y ++ K
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
GRL EA ++ M + G Q +++++N ++ C G+ A LL +M ++GF T
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
ILI+ LC+ G + A LE M + G N +YN ++ K+ K+D AI E M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 248 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
+ D TY++M+ LCK ++ A ++L G + V+DGL +G
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 304 EAKKIQSKIR 313
+A K+ ++R
Sbjct: 467 KAIKLLDEMR 476
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 129/284 (45%), Gaps = 36/284 (12%)
Query: 27 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI----- 81
+ + + HG VP+++ LI+G C+ G+ R A IL+ L SG P+ I
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM 178
Query: 82 ---------------------------TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 114
TY TI++ + K K +E+L M ++ D
Sbjct: 179 ISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD 238
Query: 115 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 174
Y +I A + + A +++M G D+V+YN L+N CKEG+L+ A L+
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 175 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 234
+M G + + TH I++ +C G A L M + GF ++ +N +++ L + G
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 235 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 274
+ AI++ E M +S +Y+ ++H CK K++ A + L
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL 402
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 118/241 (48%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+P TFNI++N LC+ A+ + + +HG P ++YN L+ G CK ++ A
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
L+ + G P+ +TY T++ ++ K + +EIL+ + KG + Y TVI
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K G+ +A +++M ++ D ++Y++L+ +EGK++ A E E+ G +
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T ++ GLCK+ A L +M G N +Y +++ L +G A+ +
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 246 M 246
+
Sbjct: 580 L 580
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+N ML LCK+ ++A+ + L G P L+TYN +I GL KAG+ A +
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L E+ P+ ITY++++ R K ++ +R G + + +++ K
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 181
+ A D++ M+ G + + SY LI EG + A LL+E+ +G
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 92 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 151
R + + G + L M G D T+I F ++G+ ++A +E + G D++
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 152 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 211
+YN +I+ YCK G++ A +LD M D T+ ++ LC +G +K A L+ M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 212 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRL 267
+ ++ Y +++ +D + HA+ + + M D TY+ +V+ +CK RL
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 268 PSASKLLLSCLKSG 281
A K L SG
Sbjct: 291 DEAIKFLNDMPSSG 304
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 125 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
V+ G L+E ++E MV G DI+ TLI +C+ GK A +L+ +E G D
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
T+ ++I G CKAG I A L ++++ ++ YN I+ L GK+ A+ V +
Sbjct: 172 VITYNVMISGYCKAGEINNA---LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 245 SMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 274
M +D + TY+ ++ C+ + A KLL
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%)
Query: 7 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 66
+P T+N +++GL K T A+++ ++ P+ +TY+ L+ GL + G++ A
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 67 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 126
E G PNA+T+ +IM ++R+ ++ L M +G + Y +I
Sbjct: 506 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 565
Query: 127 KIGRLKEATDYMEQMVTDGV 146
G KEA + + ++ G+
Sbjct: 566 YEGMAKEALELLNELCNKGL 585
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 142 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 201
V L+ V N + + G+LE + L+ M G D T LI G C+ G
Sbjct: 94 VNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKT 153
Query: 202 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV-KDSFTYSSMVHN 260
+ A LE + G ++ YN ++ K G+I++A++V + M V D TY++++ +
Sbjct: 154 RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRS 213
Query: 261 LCKAKRLPSASKLL 274
LC + +L A ++L
Sbjct: 214 LCDSGKLKQAMEVL 227
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 147/276 (53%), Gaps = 10/276 (3%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P T+N ++NGL + D+A R+F ++ P++VTYN +IKG CKAG+ + A
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
L+++ GH + ITY T+++ C+ + + + + M KG + VI
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K G+L E E M+ G + ++ Y LI+ Y K G +E A LL M +GF+ D
Sbjct: 338 CKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDV 397
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS---NLEAYNCIVDRLGKDGKIDHAINV 242
T++++++GLCK G ++ A L+Y + FD N Y+ ++D LGK G++D A +
Sbjct: 398 VTYSVVVNGLCKNGRVEEA---LDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 243 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 274
FE M K DS+ Y++++ K +++ A L
Sbjct: 455 FEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 131/294 (44%), Gaps = 6/294 (2%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
F++++ GLCK + +F + + G P + Y +LI G K+G + A +L +
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
D G P+ +TY+ ++ +N + + L+ + G + Y ++I K GR+
Sbjct: 389 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRV 448
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK--YTHT 189
EA E+M G D YN LI+ + K K++ A L ME++ CD+ YT+T
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE-GCDQTVYTYT 507
Query: 190 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE---SM 246
IL+ G+ K + A + M G + + L GK+ A + + M
Sbjct: 508 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPM 567
Query: 247 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
V M++ LCKA R+ A KL + G + + +++ LR G
Sbjct: 568 GVILDAACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVG 621
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 4/277 (1%)
Query: 36 LQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRK 95
++K F + N LIK K G + W+ +++ ++G P TY +M
Sbjct: 178 IKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMF 237
Query: 96 YKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNT 155
+ M+ D Y T+I + K G+ ++A + + M T G + D ++Y T
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 156 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 215
+I + + L EM+++G + + +++I GLCK G + E M + G
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 216 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 271
N+ Y ++D K G ++ AI + M + D TYS +V+ LCK R+ A
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEAL 417
Query: 272 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
+C G+ I +++DGL +G EA+++
Sbjct: 418 DYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI P T+++++NGLCKN + AL F + G + Y+ LI GL KAGR
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 447
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM-KRKGYTFDGFGYC 119
+ A + +E+ + G ++ Y ++ ++RK + + M + +G + Y
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 507
Query: 120 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 179
+++ K R +EA + M+ G+ + L C GK+ A +LDE+
Sbjct: 508 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPM 567
Query: 180 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
G D +I+ LCKAG IK A + + + G + +++ L K GK D A
Sbjct: 568 GVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLA 626
Query: 240 INVFES 245
+ + S
Sbjct: 627 MKLMHS 632
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 153 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 212
Y +L+++ ++ + E++K F LI K G ++ M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 213 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 268
+ G + L YN +++ L +D A VFE ME D TY++M+ CKA +
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 269 SASKLL 274
A + L
Sbjct: 275 KAMEKL 280
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 146/256 (57%), Gaps = 4/256 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T+ M++GLCKN + D A+ + + K G P++VTY+ LI G CK GR +TA+ I+ +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
G +PN I Y+T++ C R K + I AM +G+T D F + ++ + K G++
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
EA ++M M +DG+ + VS++ LIN Y G+ A+ + DEM K G +T+ L
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 247
+ GLCK G+++ A L+ ++ + + YN ++ + K G + A+++F M
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSI 644
Query: 248 VKDSFTYSSMVHNLCK 263
+ DS+TY+S++ LC+
Sbjct: 645 LPDSYTYTSLISGLCR 660
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 154/312 (49%), Gaps = 6/312 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T+N++++ LC++ + R ++K P VTYN LI G G++ A +L E+
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 324
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
G +PN +T+ ++ +K L++ M+ KG T Y ++ K
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A + +M +GV + ++Y +I+ CK G L+ A +LL+EM K G + D T++ L
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----E 247
I+G CK G K A+ + + ++G N Y+ ++ + G + AI ++E+M
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504
Query: 248 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 307
+D FT++ +V +LCKA ++ A + + G+ + +++G +SG +A
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564
Query: 308 IQSKIRMAKISH 319
+ + M K+ H
Sbjct: 565 VFDE--MTKVGH 574
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 147/305 (48%), Gaps = 4/305 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P ATFNI++N LC + + + + ++K G+ P +VTYN ++ CK GR + A +
Sbjct: 191 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 250
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L + G + TY ++ R+ + G +L M+++ + Y T+I F
Sbjct: 251 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 310
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
G++ A+ + +M++ G+ + V++N LI+ + EG + A + ME +G + +
Sbjct: 311 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 370
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ +L+DGLCK AR M + G Y ++D L K+G +D A+ + M
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 430
Query: 248 V----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
D TYS++++ CK R +A +++ + G+ ++ GC +
Sbjct: 431 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 490
Query: 304 EAKKI 308
EA +I
Sbjct: 491 EAIRI 495
Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 133/280 (47%), Gaps = 4/280 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ L+P TFN +++G AL+MF ++ G P V+Y +L+ GLCK
Sbjct: 324 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 383
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
AR + +G ITYT ++ +N + +L+ M + G D Y
Sbjct: 384 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 443
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I F K+GR K A + + ++ G+ + + Y+TLI C+ G L+ A + + M +G
Sbjct: 444 LINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
D +T +L+ LCKAG + A + M G N +++C+++ G G+ A
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563
Query: 241 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLS 276
+VF+ M FTY S++ LCK L A K L S
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 143/317 (45%), Gaps = 4/317 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
P T N +L + K+ + + + K P++ T+NILI LC G +
Sbjct: 154 FNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSS 213
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
++++++ SG+AP +TY T++ + ++K +E+L MK KG D Y +I
Sbjct: 214 YLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDL 273
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+ R+ + + M + + V+YNTLIN + EGK+ A LL+EM G +
Sbjct: 274 CRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNH 333
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T LIDG GN K A M G + +Y ++D L K+ + D A +
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 393
Query: 246 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 301
M+ TY+ M+ LCK L A LL K G+ A+++G G
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 453
Query: 302 RREAKKIQSKIRMAKIS 318
+ AK+I +I +S
Sbjct: 454 FKTAKEIVCRIYRVGLS 470
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 4/299 (1%)
Query: 11 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 70
+ ++I++ + ++L +FR + +GF P + T N ++ + K+G + LKE
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 71 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 130
+ P+ T+ ++ ++ ++ M++ GY Y TV+ + K GR
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 131 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 190
K A + ++ M + GV D+ +YN LI+ C+ ++ YLLL +M K+ ++ T+
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 191 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 249
LI+G G + A L M G N +N ++D +G A+ +F ME K
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 250 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
+Y ++ LCK A + ++GV + + ++DGL +G EA
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 422
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 9/311 (2%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
TFN+++ LCK A R + G +P V+++ LI G +G A + E+
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
GH P TY +++K + + + L ++ D Y T++ A K G L
Sbjct: 570 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 629
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG-FECDKYTHTI 190
+A +MV + D +Y +LI+ C++GK A L E E +G +K +T
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689
Query: 191 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 250
+DG+ KAG K E M+ +G ++ N ++D + GKI+ ++ M ++
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749
Query: 251 S----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 306
TY+ ++H K K + ++ L S + +G+ K ++V G+ C
Sbjct: 750 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGI----CESNML 805
Query: 307 KIQSKIRMAKI 317
+I KI A I
Sbjct: 806 EIGLKILKAFI 816
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 7 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 66
TP T N M++G + + + + P L TYNIL+ G K + T+
Sbjct: 716 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 775
Query: 67 ILKELGDSGHAPNAIT-YTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ + + +G P+ +T ++ ++ C N ++GL+IL A +G D + + +I+
Sbjct: 776 LYRSIILNGILPDKLTCHSLVLGICESNM-LEIGLKILKAFICRGVEVDRYTFNMLISKC 834
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
G + A D ++ M + G+ LD + + ++++ + + + + ++L EM KQG +
Sbjct: 835 CANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPES 894
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
+ LI+GLC+ G+IK A + E M A + +V L K GK D A +
Sbjct: 895 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 954
Query: 246 M----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
M V ++++++H CK + A +L + G+++ + ++ GL
Sbjct: 955 MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 20/274 (7%)
Query: 55 LCKAGRLRTARWILKEL----GDSGHA------------PNAITYTTIMKCCFRNRKYKL 98
L +A AR ILKEL G S N Y +++ R +
Sbjct: 82 LVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQD 141
Query: 99 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN 158
LEI M G+ + ++ + VK G ++++M+ + D+ ++N LIN
Sbjct: 142 SLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILIN 201
Query: 159 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 218
+ C EG E + L+ +MEK G+ T+ ++ CK G K A L++M G D+
Sbjct: 202 VLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDA 261
Query: 219 NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 274
++ YN ++ L + +I + M + + TY+++++ ++ AS+LL
Sbjct: 262 DVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLL 321
Query: 275 LSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
L G+ A++DG G +EA K+
Sbjct: 322 NEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 126/279 (45%), Gaps = 4/279 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
+I + P T + ++ G+C++ + L++ + G + T+N+LI C G
Sbjct: 780 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 839
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A ++K + G + + T ++ RN +++ +L M ++G + + Y
Sbjct: 840 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 899
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I ++G +K A E+M+ + V+ + ++ K GK + A LLL M K
Sbjct: 900 LINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 959
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ T L+ CK GN+ A M+ G +L +YN ++ L G + A
Sbjct: 960 LVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAF 1019
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLL 275
++E M+ + ++ TY +++ L + S + ++L
Sbjct: 1020 ELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 171/325 (52%), Gaps = 7/325 (2%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ L P T+N ++ G+CK D A M R L+ G P++++YNIL++ L G+
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
++ ++ PN +TY+ ++ R+ K + + +L MK KG T D + Y
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+IAAF + GRL A +++E M++DG DIV+YNT++ CK GK + A + ++ + G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 181 FECDKYTHTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
+ ++ + L +G+ I+ + LE M+ G D + YN ++ L ++G +D A
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEA 492
Query: 240 INVFESM---EVKDS-FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 295
+ M E S TY+ ++ CKA R+ A +L S + +G R ++ +++G
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Query: 296 LRHSGCRREAKKIQSK-IRMAKISH 319
+ +G R EA ++ + +R+ IS
Sbjct: 553 IGFAGYRAEAMELANDLVRIDAISE 577
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 142/297 (47%), Gaps = 4/297 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P +N ++NG CK D+A R+ ++ F P+ VTYNI+I LC G+L A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L +L P ITYT +++ L+++ M +G D F Y T+I K
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
G + A + + + G + D++SYN L+ +GK E L+ +M + + + T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
++ILI LC+ G I+ A L+ M + G + +Y+ ++ ++G++D AI E+M
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 248 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
+ D Y++++ LCK + A ++ + G S+ + L SG
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 21 CKNRYTDNALRMFRGLQKHGFVPELV---------------------------------- 46
C++ +L + + + G+ P+++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 47 TYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAM 106
YN LI G CK R+ A +L + +P+ +TY ++ K L L++L+ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 107 KRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL 166
Y +I A + G + EA M++M++ G++ D+ +YNT+I CKEG +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 167 EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCI 226
+ A+ ++ +E +G E D ++ IL+ L G + + M D N+ Y+ +
Sbjct: 280 DRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 227 VDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 281
+ L +DGKI+ A+N+ + M+ K D+++Y ++ C+ RL A + L + + G
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 11/228 (4%)
Query: 92 RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIV 151
R+ Y L +L M RKGY D +I F + + +A ME + G Q D+
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 159
Query: 152 SYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 211
+YN LIN +CK +++ A +LD M + F D T+ I+I LC G + L L+ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD---LALKVL 216
Query: 212 NKIGFDS---NLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 264
N++ D+ + Y +++ +G +D A+ + + M + D FTY++++ +CK
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 265 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
+ A +++ + G + ++ L + G E +K+ +K+
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 39/328 (11%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P TFN ++NGLCK + +A+ + + + G+ P++ TYN +I GLCK G ++ A +
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 68 LKELGDSGHAPNAITYTTIMK---------------------------CCFRN------- 93
L ++ +PN +TY T++ C F +
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 94 -RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 152
R +++ +E+ M+ KG D F Y +I + G+L EA + ++QM G +++
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 153 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 212
YNTLI+ +CK K A + DEME G + T+ LIDGLCK+ ++ A ++ M
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI 532
Query: 213 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLP 268
G + YN ++ + G I A ++ ++M D TY +++ LCKA R+
Sbjct: 533 MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592
Query: 269 SASKLLLSCLKSGVRILKSAQKAVVDGL 296
ASKLL S G+ + A V+ GL
Sbjct: 593 VASKLLRSIQMKGINLTPHAYNPVIQGL 620
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 161/349 (46%), Gaps = 40/349 (11%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY----------------- 48
+ P +TFN+++ LC+ A+ M + +G VP+ T+
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 49 ------------------NILIKGLCKAGRLRTARWILKELGDS-GHAPNAITYTTIMKC 89
N+++ G CK GR+ A ++E+ + G P+ T+ T++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 90 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 149
+ K +EI+ M ++GY D + Y +VI+ K+G +KEA + ++QM+T +
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 150 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 209
V+YNTLI+ CKE ++E A L + +G D T LI GLC N + A E
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 210 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAK 265
M G + + YN ++D L GK+D A+N+ + ME+ + TY++++ CKA
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 266 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRM 314
+ A ++ GV ++DGL S +A ++ ++ M
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 148/276 (53%), Gaps = 5/276 (1%)
Query: 11 ATFNIMLNGLCKNRYTDNALRMFRGLQ-KHGFVPELVTYNILIKGLCKAGRLRTARWILK 69
+ N++++G CK ++AL + + + GF P+ T+N L+ GLCKAG ++ A I+
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 70 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 129
+ G+ P+ TY +++ + + K +E+L M + + + Y T+I+ K
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 130 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 189
+++EAT+ + + G+ D+ ++N+LI C A L +EM +G E D++T+
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 190 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV- 248
+LID LC G + A L+ M G ++ YN ++D K K A +F+ MEV
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 249 ---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 281
++S TY++++ LCK++R+ A++L+ + G
Sbjct: 500 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 142/283 (50%), Gaps = 4/283 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI D +P T T+N +++ LCK + A + R L G +P++ T+N LI+GLC
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
R A + +E+ G P+ TY ++ K L +L M+ G Y T
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I F K + +EA + ++M GV + V+YNTLI+ CK ++E A L+D+M +G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ DKYT+ L+ C+ G+IK A ++ M G + ++ Y ++ L K G+++ A
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 241 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 279
+ S+++K Y+ ++ L + ++ A L L+
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 1/189 (0%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T+N +++G CK T A +F ++ HG VTYN LI GLCK+ R+ A ++ ++
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
G P+ TY +++ R K +I+ AM G D Y T+I+ K GR+
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLIN-LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 190
+ A+ + + G+ L +YN +I L+ K EA L + +E+ D ++ I
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 191 LIDGLCKAG 199
+ GLC G
Sbjct: 652 VFRGLCNGG 660
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 150/331 (45%), Gaps = 33/331 (9%)
Query: 5 DLTPCTATFNI--------------MLNGLCKNRYTDNALRMFR-GLQKHGFVPELVTYN 49
+LTP ++T + +L+ L ALR+F +K F PE Y
Sbjct: 28 NLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYE 87
Query: 50 ILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK 109
++ L ++G + IL+++ S T+ +++ +++L EILS +
Sbjct: 88 EILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESY---AQFELQDEILSVVD-- 142
Query: 110 GYTFDGFG-------YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK 162
+ D FG Y ++ V LK +M G++ D+ ++N LI C+
Sbjct: 143 -WMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCR 201
Query: 163 EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 222
+L A L+L++M G D+ T T ++ G + G++ GA E M + G + +
Sbjct: 202 AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVS 261
Query: 223 YNCIVDRLGKDGKIDHAINVFESMEVKDSF-----TYSSMVHNLCKAKRLPSASKLLLSC 277
N IV K+G+++ A+N + M +D F T++++V+ LCKA + A +++
Sbjct: 262 VNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVM 321
Query: 278 LKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
L+ G +V+ GL G +EA ++
Sbjct: 322 LQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+ +++GLCK + A ++ R +Q G YN +I+GL + + A +
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINL 632
Query: 68 LKELGDSGHA-PNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGY 111
+E+ + A P+A++Y + + C + ++ L + KG+
Sbjct: 633 FREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGF 678
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 4/312 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
P +N ++NGLCKNR +NAL +F ++K G + VTYN LI GL +GR A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+L+++ PN I +T ++ + + M R+ + F Y ++I F
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
G L +A + MV+ G D+V+YNTLI +CK ++E L EM QG D
Sbjct: 300 CIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDA 359
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
+T+ LI G C+AG + A+ M G ++ YN ++D L +GKI+ A+ + E
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED 419
Query: 246 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 301
++ D TY+ ++ LC+ +L A L S + GV+ A ++ GL G
Sbjct: 420 LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Query: 302 RREAKKIQSKIR 313
+REA K+ +++
Sbjct: 480 QREADKLCRRMK 491
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 133/275 (48%), Gaps = 4/275 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
+F I+++ C+ AL + + K GF P +VT L+ G C+ R + A ++ +
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
G PN + Y T++ +NR LE+ M++KG D Y T+I+ GR
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
+A + MV + +++ + LI+ + KEG L A L EM ++ + +T+ L
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 247
I+G C G + A+ + M G ++ YN ++ K +++ + +F M
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 248 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
V D+FTY++++H C+A +L A K+ + GV
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 129/260 (49%), Gaps = 1/260 (0%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ + P F +++ K A +++ + + VP + TYN LI G C G
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A+++ + G P+ +TY T++ ++++ + G+++ M +G D F Y T
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I + + G+L A +MV GV DIV+YN L++ C GK+E A +++++++K
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ D T+ I+I GLC+ +K A + + G + AY ++ L + G A
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 241 NVFESMEVKDSFTYSSMVHN 260
+ M+ +D F S +++
Sbjct: 485 KLCRRMK-EDGFMPSERIYD 503
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 107/241 (44%), Gaps = 4/241 (1%)
Query: 70 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 129
E+ S P+ + +T ++ + K+ + + + M+ G + D + + +I F +
Sbjct: 69 EMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCS 128
Query: 130 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 189
RL A + +M+ G + IV+ +L+N +C+ + + A L+D M+ GF + +
Sbjct: 129 RLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYN 188
Query: 190 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 249
+I+GLCK ++ A M K G ++ YN ++ L G+ A + M +
Sbjct: 189 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 248
Query: 250 ----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
+ +++++ K L A L ++ V ++++G GC +A
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308
Query: 306 K 306
K
Sbjct: 309 K 309
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 150 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 209
IV + ++ + K K + L +ME G D Y+ TILI C+ + A L
Sbjct: 79 IVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLG 138
Query: 210 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 265
M K+GF ++ +++ + + A+++ +SM+ V + Y+++++ LCK +
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198
Query: 266 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 317
L +A ++ K G+R ++ GL +SG +A ++ + KI
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T+NI++ GLC+ A +FR L + G P+ + Y +I GLC+ G R A + + +
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 105
+ G P+ Y + R+ L E++ A
Sbjct: 491 KEDGFMPSERIYDETL----RDHYTSLSAELIKA 520
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 153/310 (49%), Gaps = 4/310 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P +N +++ LCK + ++A F+ +++ G P +VTY L+ GLC + R A +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ PN ITY+ ++ +N K E+ M R D Y ++I
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
R+ EA + MV+ G D+VSYNTLIN +CK ++E L EM ++G + T
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ LI G +AG++ A+ M+ G ++ YN ++ L +G+++ A+ +FE M+
Sbjct: 368 YNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 248 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
+ D TY++++ +CK ++ A L S G++ ++ GL G
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 304 EAKKIQSKIR 313
E + + +K++
Sbjct: 488 EVEALYTKMK 497
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 133/262 (50%), Gaps = 6/262 (2%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P T+ ++NGLC + +A R+ + K P ++TY+ L+ K G++ A+
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 66 WILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 124
+ +E+ P+ +TY++++ C +R + ++ M KG D Y T+I
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN-QMFDLMVSKGCLADVVSYNTLING 339
Query: 125 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
F K R+++ +M G+ + V+YNTLI + + G ++ A +M+ G D
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
+T+ IL+ GLC G ++ A + E M K D ++ Y ++ + K GK++ A ++F
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 245 SMEVK----DSFTYSSMVHNLC 262
S+ +K D TY++M+ LC
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLC 481
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 151/315 (47%), Gaps = 4/315 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P FN +L+ + K + D + + + ++ G +L T+NI+I C ++ A I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ G+ P+ +T +++ R + + ++ M GY D Y +I + K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
R+ +A D+ +++ G++ ++V+Y L+N C + A LL +M K+ + T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
++ L+D K G + A+ E M ++ D ++ Y+ +++ L +ID A +F+ M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 248 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
K D +Y+++++ CKAKR+ KL + G+ ++ G +G
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 304 EAKKIQSKIRMAKIS 318
+A++ S++ IS
Sbjct: 383 KAQEFFSQMDFFGIS 397
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI +TP T++ +L+ KN A +F + + P++VTY+ LI GLC R
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A + + G + ++Y T++ + ++ + G+++ M ++G + Y T
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I F + G + +A ++ QM G+ DI +YN L+ C G+LE A ++ ++M+K+
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ D T+T +I G+CK G ++ A ++ G ++ Y ++ L G +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 241 NVFESME 247
++ M+
Sbjct: 491 ALYTKMK 497
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 129/266 (48%), Gaps = 14/266 (5%)
Query: 20 LCKNRYTD----NALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSG 75
L K R D +A+ +F + K P +V +N L+ + K + + K++ G
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 76 HAPNAITYTTIMKC---CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
+ T+ ++ C CF + L L IL M + GY D +++ F + R+
Sbjct: 116 IRNDLYTFNIVINCFCCCF---QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVS 172
Query: 133 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 192
+A +++MV G + DIV+YN +I+ CK ++ A+ E+E++G + T+T L+
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV---- 248
+GLC + A L M K N+ Y+ ++D K+GK+ A +FE M
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSID 292
Query: 249 KDSFTYSSMVHNLCKAKRLPSASKLL 274
D TYSS+++ LC R+ A+++
Sbjct: 293 PDIVTYSSLINGLCLHDRIDEANQMF 318
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 150 bits (380), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 159/317 (50%), Gaps = 9/317 (2%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ P T+ ++NGLCK D A +F + K PE+V +N LI G GR
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGR 368
Query: 61 LRTARWILKELGDS-GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 119
L A+ +L ++ S G P+ TY +++ ++ L LE+L M+ KG + + Y
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYT 428
Query: 120 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 179
++ F K+G++ EA + + +M DG++ + V +N LI+ +CKE ++ A + EM ++
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 180 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
G + D YT LI GLC+ IK A L M G +N YN +++ + G+I A
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 240 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 295
+ M + D TY+S++ LC+A + A L L+ G + +++G
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 296 LRHSGCRREAKKIQSKI 312
L SG EA + Q ++
Sbjct: 609 LCRSGMVEEAVEFQKEM 625
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 36/348 (10%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ + P TF +++ C D+AL + R + KHG VP V Y LI L K R
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDG--FGY 118
+ A +L+E+ G P+A T+ ++ + + ++++ M +G+ D +GY
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 119 C-----------------------------TVIAAFVKIGRLKEATDYMEQMVTD-GVQL 148
T+I FV GRL +A + MVT G+
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 149 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 208
D+ +YN+LI Y KEG + A +L +M +G + + Y++TIL+DG CK G I A L
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 209 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 264
M+ G N +NC++ K+ +I A+ +F M K D +T++S++ LC+
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 265 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
+ A LL + GV +++ G +EA+K+ +++
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 141/266 (53%), Gaps = 4/266 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P T+N ++ G K AL + ++ G P + +Y IL+ G CK G++ A
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+L E+ G PN + + ++ + + +EI M RKG D + + ++I+
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
++ +K A + M+++GV + V+YNTLIN + + G+++ A L++EM QG D+
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T+ LI GLC+AG + AR E M + G + + N +++ L + G ++ A+ +
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 246 MEVK----DSFTYSSMVHNLCKAKRL 267
M ++ D T++S+++ LC+A R+
Sbjct: 625 MVLRGSTPDIVTFNSLINGLCRAGRI 650
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 130/266 (48%), Gaps = 4/266 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P T FN +++ CK A+ +FR + + G P++ T+N LI GLC+ ++ A
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
W+L+++ G N +TY T++ R + K ++++ M +G D Y ++I
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+ G + +A E+M+ DG +S N LIN C+ G +E A EM +G D
Sbjct: 575 CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 634
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI-DHAINVFE 244
T LI+GLC+AG I+ + G + +N ++ L K G + D + + E
Sbjct: 635 VTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE 694
Query: 245 SME---VKDSFTYSSMVHNLCKAKRL 267
+E V + T+S ++ ++ + L
Sbjct: 695 GIEDGFVPNHRTWSILLQSIIPQETL 720
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 131/325 (40%), Gaps = 36/325 (11%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P ++N++L L A +F + P L T+ +++K C + +A +
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L+++ G PN++ Y T++ + + L++L M G D + VI K
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA------------------ 169
R+ EA + +M+ G D ++Y L+N CK G+++AA
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 170 --------------YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIG 215
+L D + G D T+ LI G K G + A L M G
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 216 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSAS 271
N+ +Y +VD K GKID A NV M ++ ++ ++ CK R+P A
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 272 KLLLSCLKSGVRILKSAQKAVVDGL 296
++ + G + +++ GL
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGL 504
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 15/284 (5%)
Query: 37 QKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIM----KCCFR 92
++G+ Y +LI L G +T +L ++ D G + +IM K F
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFP 162
Query: 93 NRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVS 152
+ +L LE+ + + TF Y V+ V K A + M++ + + +
Sbjct: 163 GQTTRLMLEMRNVYSCEP-TFK--SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 219
Query: 153 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 212
+ ++ +C ++++A LL +M K G + + LI L K + A LE M
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 213 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 268
+G + E +N ++ L K +I+ A + M ++ D TY +++ LCK R+
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 269 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
+A L K + I + ++ G G +AK + S +
Sbjct: 340 AAKDLFYRIPKPEIVIFNT----LIHGFVTHGRLDDAKAVLSDM 379
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 111/270 (41%), Gaps = 1/270 (0%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRL-RTARWILKE 70
+ +++ L N R+ ++ G V + + +++ KAG +T R +L+
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 71 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 130
P +Y +++ +K+ + M + F + V+ AF +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 131 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 190
+ A + M G + V Y TLI+ K ++ A LL+EM G D T
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 191 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 250
+I GLCK I A + M GF + Y +++ L K G++D A ++F + +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 251 SFTYSSMVHNLCKAKRLPSASKLLLSCLKS 280
+++++H RL A +L + S
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 150 bits (380), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 162/311 (52%), Gaps = 11/311 (3%)
Query: 11 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 70
A+FN +L+ LCK++ + A +FR L+ F + VTYN+++ G C R A +LKE
Sbjct: 162 ASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKE 220
Query: 71 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 130
+ + G PN TY T++K FR + + E MK++ D Y TV+ F G
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 131 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 190
+K A + ++M+ +GV + +YN +I + CK+ +E A ++ +EM ++G+E + T+ +
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 191 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 250
LI GL AG ++ M G + N + YN ++ + +++ A+ +FE M D
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 251 SF----TYSSMVHNLCKAKR---LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
TY+ ++ + KR + A KLLL ++ G K V++GL +G +
Sbjct: 401 CLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQA 460
Query: 304 EAKKI---QSK 311
AK+I QSK
Sbjct: 461 FAKEILRLQSK 471
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ + P T+N ML G + +A F ++K ++VTY ++ G AG
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGE 280
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
++ AR + E+ G P+ TY +++ + + + + M R+GY + Y
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I G + M++M +G + + +YN +I Y + ++E A L ++M
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 181 FECDKYTHTILIDGL 195
+ T+ ILI G+
Sbjct: 401 CLPNLDTYNILISGM 415
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 38/186 (20%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY------------ 48
MI + P AT+N M+ LCK +NA+ MF + + G+ P + TY
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 49 -----------------------NILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 85
N++I+ + + A + +++G PN TY
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Query: 86 IMKCCF---RNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV 142
++ F R+ + ++L M +G+ F + V+ + G A + +
Sbjct: 411 LISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQS 470
Query: 143 TDGVQL 148
G +L
Sbjct: 471 KSGSRL 476
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 149/310 (48%), Gaps = 4/310 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P +N +++GLCK++ DNAL + ++K G P++VTYN LI GLC +GR A +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ + P+ T+ ++ C + + E M R+ D Y +I
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
RL EA + MV+ G D+V+Y+ LIN YCK K+E L EM ++G + T
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+TILI G C+AG + A M G N+ YN ++ L +GKI+ A+ + M+
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 248 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
D TY+ ++ +CKA + A + S G+ ++ GL G RR
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 304 EAKKIQSKIR 313
EA + K++
Sbjct: 484 EADALFRKMK 493
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 143/293 (48%), Gaps = 4/293 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T NI+LN C+ AL + K G P +VT+ L+ G C+ R+ A ++ ++
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
G+ PN + Y TI+ ++++ L++L+ M++ G D Y ++I+ GR
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
+AT + M + D+ ++N LI+ KEG++ A +EM ++ + D T+++L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 247
I GLC + A +M G ++ Y+ +++ K K++H + +F M
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 248 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
V+++ TY+ ++ C+A +L A ++ + GV ++ GL +G
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 124/243 (51%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 64
++ P TFN +++ K A + + + P++VTY++LI GLC RL A
Sbjct: 251 EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA 310
Query: 65 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 124
+ + G P+ +TY+ ++ +++K + G+++ M ++G + Y +I
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQG 370
Query: 125 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
+ + G+L A + +MV GV +I++YN L++ C GK+E A ++L +M+K G + D
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD 430
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
T+ I+I G+CKAG + A +N G ++ Y ++ L K G A +F
Sbjct: 431 IVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFR 490
Query: 245 SME 247
M+
Sbjct: 491 KMK 493
Score = 110 bits (276), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 130/279 (46%), Gaps = 4/279 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P A F+ +L+ + K + D + ++ +Q G L T NIL+ C+ +L A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ GH P+ +T+ +++ R + L + M GY + Y T+I K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
++ A D + +M DG+ D+V+YN+LI+ C G+ A ++ M K+ D +T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
LID K G + A E M + D ++ Y+ ++ L ++D A +F M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 248 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
K D TYS +++ CK+K++ KL + GV
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T++I++NG CK++ ++ +++F + + G V VTY ILI+G C+AG+L A I
Sbjct: 324 PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI 383
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ + G PN ITY ++ N K + L IL+ M++ G D Y +I K
Sbjct: 384 FRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
G + +A D + G+ DI +Y T++ K+G A L +M++ G
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 108 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 167
R+ Y+ +G Y ++ ++ +L ++ D MV I ++ L++ K K +
Sbjct: 40 RRAYS-NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYD 98
Query: 168 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 227
L ++M+ G + T IL++ C+ + A L M K+G + ++ + ++
Sbjct: 99 VVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLL 158
Query: 228 DRLGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 283
+ + ++ A+ +F+ M + Y++++ LCK+K++ +A LL K G+
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 284 ILKSAQKAVVDGLRHSGCRREAKKIQS 310
+++ GL SG +A ++ S
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVS 245
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 11 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 70
T+NI++ G+CK +A ++ L G +P++ TY ++ GL K G R A + ++
Sbjct: 432 VTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRK 491
Query: 71 LGDSGHAPN 79
+ + G PN
Sbjct: 492 MKEDGILPN 500
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 39/349 (11%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T FN +LNGLC AL + + + G P L+T N L+ GLC G++ A +
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ + ++G PN +TY ++ ++ + L +E+L M+ + D Y +I K
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC-------------------------- 161
G L A + +M G + DI++YNTLI +C
Sbjct: 276 DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT 335
Query: 162 ---------KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 212
KEGKL A LL EM ++G + T+ LIDG CK ++ A ++ M
Sbjct: 336 FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI 395
Query: 213 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 268
G D ++ +N +++ K +ID + +F M ++ ++ TY+++V C++ +L
Sbjct: 396 SKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLE 455
Query: 269 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 317
A KL + VR + K ++DGL +G +A +I KI +K+
Sbjct: 456 VAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 156/297 (52%), Gaps = 8/297 (2%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
++I+++GLCK+ DNA +F ++ GF +++TYN LI G C AGR +L+++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
+PN +T++ ++ + K + ++L M ++G + Y ++I F K RL+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 133 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 192
EA ++ M++ G DI+++N LIN YCK +++ L EM +G + T+ L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 249
G C++G ++ A+ + M ++ +Y ++D L +G+++ A+ +F +E
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 250 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
D Y ++H +C A ++ A L S GV++ A ++ L CR+++
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL----CRKDS 558
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 136/274 (49%), Gaps = 4/274 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T+N ++ G C D+ ++ R + K P +VT+++LI K G+LR A +LKE+
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
G APN ITY +++ + + + ++++ M KG D + +I + K R+
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
+ + +M GV + V+YNTL+ +C+ GKLE A L EM + D ++ IL
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
+DGLC G ++ A + K + ++ Y I+ + K+D A ++F S+ +K
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 250 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 281
D+ Y+ M+ LC+ L A L + G
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 142/278 (51%), Gaps = 4/278 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ P T+ +LN +CK+ T A+ + R +++ + V Y+I+I GLCK G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A + E+ G + ITY T++ ++ G ++L M ++ + + +
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I +FVK G+L+EA +++M+ G+ + ++YN+LI+ +CKE +LE A ++D M +G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ D T ILI+G CKA I M+ G +N YN +V + GK++ A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 241 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLL 274
+F+ M + D +Y ++ LC L A ++
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Score = 127 bits (320), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T +IM+N C+ R A + K G+ P+ V +N L+ GLC R+ A ++ +
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ GH P IT T++ N K + ++ M G+ + Y V+ K G+
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A + + +M ++LD V Y+ +I+ CK+G L+ A+ L +EME +GF+ D T+ L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 247
I G C AG L M K N+ ++ ++D K+GK+ A + + M
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 248 VKDSFTYSSMVHNLCKAKRLPSASKLL 274
++ TY+S++ CK RL A +++
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMV 391
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 141/286 (49%), Gaps = 4/286 (1%)
Query: 27 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 86
D+A+ +FR + + +P ++ +N L + K + + K++ G A + T + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 87 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 146
+ C R RK + + + GY D + T++ R+ EA + +++MV G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 147 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 206
+ +++ NTL+N C GK+ A +L+D M + GF+ ++ T+ +++ +CK+G A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 207 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 262
L M + + Y+ I+D L KDG +D+A N+F ME+K D TY++++ C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 263 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
A R +KLL +K + ++D G REA ++
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 4/300 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI ++P TF+++++ K A ++ + + + G P +TYN LI G CK R
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A ++ + G P+ +T+ ++ + + GLE+ M +G + Y T
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ F + G+L+ A ++MV+ V+ DIVSY L++ C G+LE A + ++EK
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
E D + I+I G+C A + A + G + AYN ++ L + + A
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 241 NVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
+F M D TY+ ++ +A++L+ SG S K V++ L
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI P TFNI++NG CK D+ L +FR + G + VTYN L++G C++G+
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A+ + +E+ P+ ++Y ++ N + + LEI +++ D Y
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I ++ +A D + GV+LD +YN +I+ C++ L A +L +M ++G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
D+ T+ ILI + A +E M GF +++ +++ L G++D +
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS-GELDKS 631
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
+NIM++ LC+ A +FR + + G P+ +TYNILI+ TA +++E+
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 107
SG + T ++ K L++LS +
Sbjct: 606 SSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 157/314 (50%), Gaps = 4/314 (1%)
Query: 4 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
G + +N +++GLCK ++ D+AL +F + G P++ TY+ LI LC GR
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 64 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 123
A +L ++ + PN +T++ ++ + K ++ M ++ D F Y ++I
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 124 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 183
F RL EA E M++ ++V+Y+TLI +CK ++E L EM ++G
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 184 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 243
+ T+T LI G +A + A++ + M +G N+ YN ++D L K+GK+ A+ VF
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 244 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 299
E ++ D +TY+ M+ +CKA ++ +L + GV A ++ G
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRK 551
Query: 300 GCRREAKKIQSKIR 313
G + EA + K++
Sbjct: 552 GSKEEADSLLKKMK 565
Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 136/267 (50%), Gaps = 4/267 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T++I +N C+ AL + + K G+ P++VT + L+ G C + R+ A ++ ++
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ G+ P+ T+TT++ F + K + ++ M ++G D Y TV+ K G +
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A +++M ++ D+V YNT+I+ CK ++ A L EM+ +G D +T++ L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
I LC G A L M + + N+ ++ ++D K+GK+ A +++ M +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 250 --DSFTYSSMVHNLCKAKRLPSASKLL 274
D FTYSS+++ C RL A +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMF 386
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 134/265 (50%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P TF+ +++ K A +++ + K P++ TY+ LI G C R
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A+ + + + PN +TY+T++K + ++ + G+E+ M ++G + Y T
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I F + A +QMV+ GV +I++YN L++ CK GKL A ++ + +++
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
E D YT+ I+I+G+CKAG ++ ++ G N+ AYN ++ + G + A
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 241 NVFESMEVKDSFTYSSMVHNLCKAK 265
++ + M+ S + L +A+
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRAR 583
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 144/297 (48%), Gaps = 4/297 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T TF +++GL + A+ + + + G P+LVTY ++ GLCK G + A +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
LK++ + + Y TI+ + + L + + M KG D F Y ++I+
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
GR +A+ + M+ + ++V+++ LI+ + KEGKL A L DEM K+ + D +T
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
++ LI+G C + A+ E M N+ Y+ ++ K +++ + +F M
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 248 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
V ++ TY++++H +A+ +A + + GV ++DGL +G
Sbjct: 426 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 149/302 (49%), Gaps = 4/302 (1%)
Query: 15 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 74
I+ N L D+A+ +F + K P +V +N L+ + K + + +++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 75 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 134
G + + TY+ + C R + L L +L+ M + GY D +++ + R+ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 135 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 194
++QMV G + D ++ TLI+ K A L+D+M ++G + D T+ +++G
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 195 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 250
LCK G+I A L+ M K ++++ YN I+D L K +D A+N+F M+ K D
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 251 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 310
FTYSS++ LC R AS+LL ++ + A++D G EA+K+
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 311 KI 312
++
Sbjct: 353 EM 354
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 133/279 (47%), Gaps = 4/279 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T + +LNG C ++ +A+ + + + G+ P+ T+ LI GL + A +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ ++ G P+ +TY T++ + L L +L M++ D Y T+I K
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK 270
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+ +A + +M G++ D+ +Y++LI+ C G+ A LL +M ++ + T
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ LID K G + A + M K D ++ Y+ +++ ++D A ++FE M
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 248 VKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
KD F TYS+++ CKAKR+ +L + G+
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P T++ ++NG C + D A MF + P +VTY+ LIKG CKA R
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ + +E+ G N +TYTT++ F+ R + M G + Y
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ K G+L +A E + ++ DI +YN +I CK GK+E + L + +G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ + +I G C+ G+ + A L+ M + G N YN ++ +DG + +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 241 NVFESM 246
+ + M
Sbjct: 594 ELIKEM 599
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 116/240 (48%), Gaps = 1/240 (0%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI D P T++ ++ G CK + + + +FR + + G V VTY LI G +A
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
A+ + K++ G PN +TY ++ +N K + + ++R D + Y
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I K G++++ + + GV ++++YNT+I+ +C++G E A LL +M++ G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ T+ LI + G+ + + ++ M GF + + + L DG++D +
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSF 627
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 4/245 (1%)
Query: 78 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 137
P+ + + ++ + K++L + + M+ G + D + Y I F + +L A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 138 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 197
+ +M+ G + DIV+ ++L+N YC ++ A L+D+M + G++ D +T T LI GL
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 198 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFT 253
A ++ M + G +L Y +V+ L K G ID A+++ + ME D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 254 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 313
Y++++ LCK K + A L G+R +++ L + G +A ++ S +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 314 MAKIS 318
KI+
Sbjct: 321 ERKIN 325
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
++P +N M++G C+ + A + + +++ G +P TYN LI+ + G +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 104
++KE+ G A +A T + R K L++LS
Sbjct: 594 ELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 632
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 157/350 (44%), Gaps = 39/350 (11%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T TF+ ++NGLC AL + + + G P L+T N L+ GLC G++ A +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ + ++G PN +TY ++K ++ + L +E+L M+ + D Y +I K
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC-------------------------- 161
G L A + +M G + DI+ Y TLI +C
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 162 ---------KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 212
KEGKL A L EM ++G D T+T LIDG CK + A L+ M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 213 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 268
G N+ +N +++ K ID + +F M V D+ TY++++ C+ +L
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 269 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 318
A +L + VR + K ++DGL +G +A +I KI +K+
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 148/297 (49%), Gaps = 4/297 (1%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
++I+++GLCK+ DNA +F ++ GF +++ Y LI+G C AGR +L+++
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
P+ + ++ ++ C + K + E+ M ++G + D Y ++I F K +L
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 133 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 192
+A ++ MV+ G +I ++N LIN YCK ++ L +M +G D T+ LI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 249
G C+ G ++ A+ + M ++ +Y ++D L +G+ + A+ +FE +E
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 250 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
D Y+ ++H +C A ++ A L S GV+ ++ GL G EA
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 147/296 (49%), Gaps = 4/296 (1%)
Query: 27 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 86
D+A+ +F+ + + P L+ ++ L + + + + K++ G A N T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 87 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 146
+ CC R RK L + + + GY D + T+I GR+ EA + +++MV G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 147 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 206
+ +++ N L+N C GK+ A LL+D M + GF+ ++ T+ ++ +CK+G A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 207 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 262
L M + + Y+ I+D L KDG +D+A N+F ME+K D Y++++ C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 263 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 318
A R +KLL +K + A A++D G REA+++ ++ IS
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 133/267 (49%), Gaps = 4/267 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T +IM+N C+ R A + K G+ P+ VT++ LI GLC GR+ A ++ +
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ GH P IT ++ N K + ++ M G+ + Y V+ K G+
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A + + +M ++LD V Y+ +I+ CK+G L+ A+ L +EME +GF+ D +T L
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
I G C AG L M K ++ A++ ++D K+GK+ A + + M +
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 250 --DSFTYSSMVHNLCKAKRLPSASKLL 274
D+ TY+S++ CK +L A+ +L
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHML 375
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 138/300 (46%), Gaps = 4/300 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI +TP F+ +++ K A + + + + G P+ VTY LI G CK +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A +L + G PN T+ ++ + GLE+ M +G D Y T
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I F ++G+L+ A + ++MV+ V+ DIVSY L++ C G+ E A + +++EK
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
E D + I+I G+C A + A + G +++ YN ++ L K G + A
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
+F ME + TY+ ++ ++KL+ + G + S K VVD L
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 4/234 (1%)
Query: 3 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 62
CG P TFNI++NG CK D+ L +FR + G V + VTYN LI+G C+ G+L
Sbjct: 383 CG---PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 63 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 122
A+ + +E+ P+ ++Y ++ N + + LEI +++ D Y +I
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 123 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 182
++ +A D + GV+ D+ +YN +I CK+G L A LL +ME+ G
Sbjct: 500 HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS 559
Query: 183 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 236
+ T+ ILI G+ + +E + + GF + +VD L DG++
Sbjct: 560 PNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS-DGRL 612
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+NIM+ GLCK A +FR +++ G P TYNILI+ G + +
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 104
++E+ G + +A T ++ R K L++LS
Sbjct: 585 IEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDMLS 621
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 4/314 (1%)
Query: 4 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
G L P +N +++GLCK ++ D+AL +F+ ++ G P +VTY+ LI LC GR
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 64 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 123
A +L ++ + P+ T++ ++ + K ++ M ++ Y ++I
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 124 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 183
F RL EA E MV+ D+V+YNTLI +CK ++E + EM ++G
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 184 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 243
+ T+ ILI GL +AG+ A+ + M G N+ YN ++D L K+GK++ A+ VF
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 244 ESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 299
E ++ +TY+ M+ +CKA ++ L + GV+ A ++ G
Sbjct: 490 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 549
Query: 300 GCRREAKKIQSKIR 313
G + EA + +++
Sbjct: 550 GSKEEADALFKEMK 563
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 136/265 (51%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P TF+ +++ K A +++ + K P +VTY+ LI G C R
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A+ + + + P+ +TY T++K + ++ + G+E+ M ++G + Y
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I + G A + ++MV+DGV +I++YNTL++ CK GKLE A ++ + +++
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
E YT+ I+I+G+CKAG ++ ++ G ++ AYN ++ + G + A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 241 NVFESMEVKDSFTYSSMVHNLCKAK 265
+F+ M+ + S + L +A+
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRAR 581
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 146/299 (48%), Gaps = 5/299 (1%)
Query: 18 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 77
NGL + + D+A+ +F + K P ++ ++ L+ + K + + +++ + G
Sbjct: 55 NGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 78 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 137
N TY+ ++ C R + L L +L M + GY + +++ + R+ EA
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 138 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 197
++QM G Q + V++NTLI+ K A L+D M +G + D T+ ++++GLCK
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 198 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 253
G+ A L M + + + YN I+D L K +D A+N+F+ ME K + T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 254 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
YSS++ LC R AS+LL ++ + A++D G EA+K+ ++
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 1/233 (0%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+N ++ G CK + + + +FR + + G V VTYNILI+GL +AG A+ I
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
KE+ G PN +TY T++ +N K + + + ++R + Y +I K
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
G++++ D + GV+ D+V+YNT+I+ +C++G E A L EM++ G +
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ LI + G+ + + ++ M GF + + + L DG++D +
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKSF 625
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 132/268 (49%), Gaps = 6/268 (2%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T++I++N C+ AL + + K G+ P +VT + L+ G C + R+ A ++ ++
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+G+ PN +T+ T++ F + K + ++ M KG D Y V+ K G
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A + + +M ++ ++ YNT+I+ CK ++ A L EME +G + T++ L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 251
I LC G A L M + + ++ ++ ++D K+GK+ A +++ M VK S
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM-VKRS 356
Query: 252 F-----TYSSMVHNLCKAKRLPSASKLL 274
TYSS+++ C RL A ++
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 2/247 (0%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAG 59
M+ + P T++ ++NG C + D A +MF + KH F P++VTYN LIKG CK
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYK 410
Query: 60 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 119
R+ + +E+ G N +TY +++ F+ + EI M G + Y
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 120 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 179
T++ K G+L++A E + ++ I +YN +I CK GK+E + L + +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 180 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
G + D + +I G C+ G+ + A + M + G N YN ++ +DG + +
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 240 INVFESM 246
+ + M
Sbjct: 591 AELIKEM 597
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 139/305 (45%), Gaps = 4/305 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P F+ +L+ + K D + + +Q G TY+ILI C+ +L A +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ G+ PN +T ++++ +++ + ++ M GY + + T+I
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+ EA +++MV G Q D+V+Y ++N CK G + A+ LL++ME+ E
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ +IDGLCK ++ A + M G N+ Y+ ++ L G+ A + M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 248 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
+ D FT+S+++ K +L A KL +K + ++++G
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 304 EAKKI 308
EAK++
Sbjct: 379 EAKQM 383
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P +N M++G C+ + A +F+ +++ G +P YN LI+ + G + +
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAEL 593
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 104
+KE+ G A +A T + R K L++LS
Sbjct: 594 IKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 144/281 (51%), Gaps = 5/281 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P T+N ++NG CK ++A+ + ++ P TYN LIKG CK+ + A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAM 447
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+L ++ + P+ +TY +++ R+ + +LS M +G D + Y ++I +
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K R++EA D + + GV ++V Y LI+ YCK GK++ A+L+L++M + +
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T LI GLC G +K A L E M KIG + ++ RL KDG DHA + F+
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 246 M----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
M D+ TY++ + C+ RL A ++ ++GV
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 149/311 (47%), Gaps = 5/311 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P T+ ++ G C+ + D+A ++F + G V Y LI GLC A R+ A
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ ++ D P TYT ++K + + L ++ M+ G + Y +I +
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+ ++A + + QM+ G+ ++++YN LIN YCK G +E A +++ ME + +
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T+ LI G CK+ N+ A L M + ++ YN ++D + G D A +
Sbjct: 429 RTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 246 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 301
M V D +TY+SM+ +LCK+KR+ A L S + GV A++DG +G
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 302 RREAKKIQSKI 312
EA + K+
Sbjct: 548 VDEAHLMLEKM 558
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 4/256 (1%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
+N +LN L + D +++ + + P + TYN ++ G CK G + A + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
++G P+ TYT+++ + + ++ + M KG + Y +I R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 133 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 192
EA D +M D + +Y LI C + A L+ EME+ G + + +T+T+LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 249
D LC + AR L M + G N+ YN +++ K G I+ A++V E ME +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 250 -DSFTYSSMVHNLCKA 264
++ TY+ ++ CK+
Sbjct: 426 PNTRTYNELIKGYCKS 441
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 23/292 (7%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P + +++G CK D A M + +P +T+N LI GLC G+L+ A
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ +++ G P T T ++ ++ + M G D Y T I +
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+ GRL +A D M +M +GV D+ +Y++LI Y G+ A+ +L M G E +
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 186 YTHTILIDGLC--KAGNIKGARLHLEYM-NKIGFDS---------------NLEAYNCIV 227
+T LI L K G KG+ L M N + FD+ N ++Y ++
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 228 DRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL-----CKAKRLPSASKLL 274
+ + G + A VF+ M+ + + S +V N CK K+ A+K++
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 119/265 (44%), Gaps = 19/265 (7%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ + P + TFN +++GLC + A + + K G P + T ILI L K G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGD 617
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
A +++ SG P+A TYTT ++ R + ++++ M+ G + D F Y +
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLIN--LYCKEGK------------- 165
+I + +G+ A D +++M G + ++ +LI L K GK
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 166 ---LEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNK-IGFDSNLE 221
+ LL++M + + ++ LI G+C+ GN++ A ++M + G +
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 222 AYNCIVDRLGKDGKIDHAINVFESM 246
+N ++ K K + A V + M
Sbjct: 798 VFNALLSCCCKLKKHNEAAKVVDDM 822
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 123/280 (43%), Gaps = 20/280 (7%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ P T+ + C+ +A M ++++G P+L TY+ LIKG G+
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMK-----------------CCFRNR-KYKLGLEI 102
A +LK + D+G P+ T+ +++K C N ++ +E+
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 103 LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMV-TDGVQLDIVSYNTLINLYC 161
L M T + Y +I ++G L+ A + M +G+ + +N L++ C
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 162 KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 221
K K A ++D+M G + +LI GL K G + + + + G+ +
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDEL 867
Query: 222 AYNCIVDRLGKDGKIDHAINVFESMEVKDSFTYSSMVHNL 261
A+ I+D +GK G ++ +F ME K+ +SS ++L
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVME-KNGCKFSSQTYSL 906
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 115/275 (41%), Gaps = 39/275 (14%)
Query: 48 YNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMK 107
YN L+ L + G + + + E+ + PN TY ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVN------------------- 226
Query: 108 RKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 167
GYC K+G ++EA Y+ ++V G+ D +Y +LI YC+ L+
Sbjct: 227 ---------GYC-------KLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 168 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 227
+A+ + +EM +G ++ +T LI GLC A I A M + Y ++
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 228 DRLGKDGKIDHAINVFESME---VKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 283
L + A+N+ + ME +K + TY+ ++ +LC + A +LL L+ G+
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 284 ILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 318
A+++G G +A + + K+S
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Query: 27 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG-DSGHAPNAITYTT 85
D + + + +H P +Y LI G+C+ G LR A + + + G +P+ + +
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801
Query: 86 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV-IAAFVKIGRLKEATDYMEQMVTD 144
++ CC + +K+ +++ M G+ C V I K G + T + ++
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICVGH-LPQLESCKVLICGLYKKGEKERGTSVFQNLLQC 860
Query: 145 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 194
G D +++ +I+ K+G +EA Y L + MEK G + T+++LI+G
Sbjct: 861 GYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 147 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 206
+L I YNTL+N + G ++ + EM + + YT+ +++G CK GN++ A
Sbjct: 180 KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ 239
Query: 207 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 262
++ + + G D + Y ++ + +D A VF M +K + Y+ ++H LC
Sbjct: 240 YVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLC 299
Query: 263 KAKRLPSASKLLL 275
A+R+ A L +
Sbjct: 300 VARRIDEAMDLFV 312
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 159/350 (45%), Gaps = 39/350 (11%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T TF+ ++NGLC AL + + + G P+L+T N L+ GLC +G+ A +
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ ++ + G PNA+TY ++ ++ + L +E+L M+ + D Y +I K
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC-------------------------- 161
G L A + +M G+ +I++YN LI +C
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 162 ---------KEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMN 212
KEGKL A L EM +G D T+T LIDG CK ++ A ++ M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 213 KIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLP 268
G D N+ +N +++ K +ID + +F M V D+ TY++++ C+ +L
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 269 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 318
A +L + V K ++DGL +G +A +I KI +K+
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Score = 140 bits (354), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 4/305 (1%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
++I+++GLCK+ DNA +F ++ G ++TYNILI G C AGR +L+++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
PN +T++ ++ + K + E+ M +G D Y ++I F K L
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 133 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 192
+A ++ MV+ G +I ++N LIN YCK +++ L +M +G D T+ LI
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK--- 249
G C+ G + A+ + M N+ Y ++D L +G+ + A+ +FE +E
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505
Query: 250 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
D Y+ ++H +C A ++ A L S GV+ ++ GL G EA+ +
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Query: 309 QSKIR 313
K+
Sbjct: 566 FRKME 570
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 4/273 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+T T+NI++ G C D+ ++ R + K P +VT+++LI K G+LR A
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ KE+ G AP+ ITYT+++ + +++ M KG + + +I +
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K R+ + + +M GV D V+YNTLI +C+ GKL A L EM + +
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T+ IL+DGLC G + A E + K + ++ YN I+ + K+D A ++F S
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Query: 246 MEVK----DSFTYSSMVHNLCKAKRLPSASKLL 274
+ +K TY+ M+ LCK L A L
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLF 566
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 115/236 (48%), Gaps = 1/236 (0%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ P TFNI++NG CK D+ L +FR + G V + VTYN LI+G C+ G+
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A+ + +E+ PN +TY ++ N + + LEI +++ D Y
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I ++ +A D + GV+ + +YN +I CK+G L A LL +ME+ G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 236
D +T+ ILI G+ + +E + + GF + ++D L DG++
Sbjct: 574 HAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS-DGRL 628
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 142/291 (48%), Gaps = 4/291 (1%)
Query: 26 TDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 85
D+A+ +FR + +P ++ ++ L + K + + K++ G A N T +
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 86 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 145
++ C R RK L + + + GY + + T+I GR+ EA + +++MV G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 146 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 205
+ D+++ NTL+N C GK A LL+D+M + G + + T+ +++ +CK+G A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 206 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNL 261
L M + + Y+ I+D L K G +D+A N+F ME+K + TY+ ++
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 262 CKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
C A R +KLL +K + ++D G REA+++ ++
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 135/300 (45%), Gaps = 4/300 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P TF+++++ K A + + + G P+ +TY LI G CK
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A ++ + G PN T+ ++ + + GLE+ M +G D Y T
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I F ++G+L A + ++MV+ V +IV+Y L++ C G+ E A + +++EK
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
E D + I+I G+C A + A + G ++ YN ++ L K G + A
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
+F ME D +TY+ ++ + KL+ + G + S K V+D L
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 139/301 (46%), Gaps = 6/301 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI P F+ + + + K + D L + + ++ G L T +I+I C+ +
Sbjct: 79 MIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 119
L A + ++ G+ PN IT++T++ C R + LE++ M G+ D
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE-ALELVDRMVEMGHKPDLITIN 197
Query: 120 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 179
T++ G+ EA +++MV G Q + V+Y ++N+ CK G+ A LL +ME++
Sbjct: 198 TLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Query: 180 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
+ D ++I+IDGLCK G++ A M G +N+ YN ++ G+ D
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 240 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 295
+ M + + T+S ++ + K +L A +L + G+ +++DG
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 296 L 296
Sbjct: 378 F 378
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 109/252 (43%), Gaps = 31/252 (12%)
Query: 67 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 126
+ +++ S P I ++ + + ++Y L L + M+ KG + + +I F
Sbjct: 75 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134
Query: 127 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 186
+ +L A M +++ G + + ++++TLIN C EG++ A L+D M + G + D
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194
Query: 187 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 246
T L++GLC +G A L ++ M + G N
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN--------------------------- 227
Query: 247 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 306
+ TY +++ +CK+ + A +LL + +++ ++DGL G A
Sbjct: 228 ----AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 307 KIQSKIRMAKIS 318
+ +++ M I+
Sbjct: 284 NLFNEMEMKGIT 295
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+NIM+ GLCK A +FR +++ G P+ TYNILI+ G + +
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 104
++EL G + +A T ++ R K L++LS
Sbjct: 601 IEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 154/305 (50%), Gaps = 4/305 (1%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
FN +++ LCK R+ D+AL +F+ ++ G P +VTY+ LI LC GR A +L ++
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
+ PN +T+ ++ + K+ ++ M ++ D F Y +++ F RL
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 133 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 192
+A E MV+ D+V+YNTLI +CK ++E L EM +G D T+T LI
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK 249
GL G+ A+ + M G ++ Y+ ++D L +GK++ A+ VF+ M E+K
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 250 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
D + Y++M+ +CKA ++ L S GV+ ++ GL +EA +
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 309 QSKIR 313
K++
Sbjct: 563 LKKMK 567
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 4/262 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P TFN +++ K A +++ + K P++ TYN L+ G C R
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A+ + + + P+ +TY T++K ++++ + G E+ M +G D Y T
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I G A +QMV+DGV DI++Y+ L++ C GKLE A + D M+K
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ D Y +T +I+G+CKAG + ++ G N+ YN ++ L + A
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 241 NVFESME----VKDSFTYSSMV 258
+ + M+ + +S TY++++
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLI 582
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 133/267 (49%), Gaps = 4/267 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T+NI++N C+ AL + + K G+ P +VT + L+ G C R+ A ++ ++
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ G+ P+ IT+TT++ F + K + ++ M ++G + Y V+ K G
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A + + +M ++ D+V +NT+I+ CK ++ A L EME +G + T++ L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
I LC G A L M + + NL +N ++D K+GK A +++ M +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 250 --DSFTYSSMVHNLCKAKRLPSASKLL 274
D FTY+S+V+ C RL A ++
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 142/305 (46%), Gaps = 4/305 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T + +LNG C + +A+ + + + G+ P+ +T+ LI GL + A +
Sbjct: 153 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 212
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ + G PN +TY ++ + L L +L+ M+ D + T+I + K
Sbjct: 213 VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK 272
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+ +A + ++M T G++ ++V+Y++LI+ C G+ A LL +M ++ + T
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
LID K G A + M K D ++ YN +V+ ++D A +FE M
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 248 VKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
KD F TY++++ CK+KR+ ++L G+ ++ GL H G
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 304 EAKKI 308
A+K+
Sbjct: 453 NAQKV 457
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 148/314 (47%), Gaps = 4/314 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T TF +++GL + A+ + + + G P LVTY +++ GLCK G A +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ + + + + TI+ + R L + M+ KG + Y ++I+
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
GR +A+ + M+ + ++V++N LI+ + KEGK A L D+M K+ + D +T
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ L++G C + A+ E+M ++ YN ++ K +++ +F M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 248 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
V D+ TY++++ L +A K+ + GV ++DGL ++G
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 304 EAKKIQSKIRMAKI 317
+A ++ ++ ++I
Sbjct: 488 KALEVFDYMQKSEI 501
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ D P T+N ++ G CK++ ++ +FR + G V + VTY LI+GL G
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
A+ + K++ G P+ +TY+ ++ N K + LE+ M++ D + Y T
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I K G++ + D + GV+ ++V+YNT+I+ C + L+ AY LL +M++ G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
+ T+ LI + G+ + + M F + + + L DG++D +
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 628
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 39/305 (12%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P FN +L+ + K + D + + +Q+ V L TYNILI C+ ++ A +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ G+ P+ +T ++++ ++ + ++ M GY D + T+I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+ EA +++MV G Q ++V+Y ++N CK G + A LL++ME E D
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ID LCK + +D A+N+F+ ME
Sbjct: 263 FNTIIDSLCKYRH-----------------------------------VDDALNLFKEME 287
Query: 248 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
K + TYSS++ LC R AS+LL ++ + A++D G
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 304 EAKKI 308
EA+K+
Sbjct: 348 EAEKL 352
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 127/308 (41%), Gaps = 40/308 (12%)
Query: 15 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 74
I+ NGL + D+A+ +F G+ K +P +V +N L+ + K + + +++
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 75 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 134
TY ++ C R + L L +L M + GY
Sbjct: 115 EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGY----------------------- 151
Query: 135 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 194
+ IV+ ++L+N YC ++ A L+D+M + G+ D T T LI G
Sbjct: 152 ------------EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 195 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 250
L A ++ M + G NL Y +V+ L K G D A+N+ ME D
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 251 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 310
+++++ +LCK + + A L G+R +++ L G +A ++ S
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 311 KIRMAKIS 318
+ KI+
Sbjct: 320 DMIEKKIN 327
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+N M++GLC R A + + +++ G +P TYN LI+ + G + +
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAEL 597
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 104
++E+ +A T + R K L++LS
Sbjct: 598 IREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDMLS 634
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 155/309 (50%), Gaps = 4/309 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ ++P T+NI++ G C D AL +F ++ G +P +VTYN LI G CK +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ +L+ + G PN I+Y ++ R + K +L+ M R+GY+ D Y T
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I + K G +A +M+ G+ +++Y +LI+ CK G + A LD+M +G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
++ T+T L+DG + G + A L MN GF ++ YN +++ GK++ AI
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 241 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
V E M+ K D +YS+++ C++ + A ++ ++ G++ +++ G
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 297 RHSGCRREA 305
+EA
Sbjct: 496 CEQRRTKEA 504
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 154/322 (47%), Gaps = 19/322 (5%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P T+ +++G + Y + A R+ R + +GF P +VTYN LI G C G++ A
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+L+++ + G +P+ ++Y+T++ R+ L + M KG D Y ++I F
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+ R KEA D E+M+ G+ D +Y LIN YC EG LE A L +EM ++G D
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 186 YTHTILIDGLCKAGNIKGAR---LHLEYMNKIGFD----------SNLEAYNCI--VDRL 230
T+++LI+GL K + A+ L L Y + D SN+E + + +
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGF 615
Query: 231 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 286
G + A VFESM K D Y+ M+H C+A + A L +KSG +
Sbjct: 616 CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHT 675
Query: 287 SAQKAVVDGLRHSGCRREAKKI 308
A+V L G E +
Sbjct: 676 VTVIALVKALHKEGKVNELNSV 697
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 5/310 (1%)
Query: 8 PCTATFNIMLNGLCKN-RYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 66
P ++N +L+ ++ R A +F+ + + P + TYNILI+G C AG + A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 67 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 126
+ ++ G PN +TY T++ + RK G ++L +M KG + Y VI
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 127 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 186
+ GR+KE + + +M G LD V+YNTLI YCKEG A ++ EM + G
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 187 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 246
T+T LI +CKAGN+ A L+ M G N Y +VD + G ++ A V M
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 247 E----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 302
TY+++++ C ++ A +L + G+ + V+ G S
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 303 REAKKIQSKI 312
EA +++ ++
Sbjct: 467 DEALRVKREM 476
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 155/312 (49%), Gaps = 6/312 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P ++N+++NGLC+ + + + G+ + VTYN LIKG CK G A
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ E+ G P+ ITYT+++ + +E L M+ +G + Y T++ F
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+ G + EA + +M +G +V+YN LIN +C GK+E A +L++M+++G D
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 186 YTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
+++ ++ G C++ ++ A R+ E + K G + Y+ ++ + + A +++E
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYSSLIQGFCEQRRTKEACDLYE 509
Query: 245 SM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
M D FTY+++++ C L A +L ++ GV +++GL
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS 569
Query: 301 CRREAKKIQSKI 312
REAK++ K+
Sbjct: 570 RTREAKRLLLKL 581
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 136/265 (51%), Gaps = 6/265 (2%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ LTP T+ +++ +CK + A+ ++ G P TY L+ G + G
Sbjct: 336 MLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGY 395
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A +L+E+ D+G +P+ +TY ++ K + + +L MK KG + D Y T
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
V++ F + + EA +MV G++ D ++Y++LI +C++ + + A L +EM + G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 181 FECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
D++T+T LI+ C G+++ A +LH E + K G ++ Y+ +++ L K + A
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK-GVLPDVVTYSVLINGLNKQSRTREA 574
Query: 240 ----INVFESMEVKDSFTYSSMVHN 260
+ +F V TY +++ N
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 9/209 (4%)
Query: 99 GLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR-LKEATDYMEQMVTDGVQLDIVSYNTLI 157
L I+ + G+ Y V+ A ++ R + A + ++M+ V ++ +YN LI
Sbjct: 153 ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILI 212
Query: 158 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 217
+C G ++ A L D+ME +G + T+ LIDG CK I L M G +
Sbjct: 213 RGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE 272
Query: 218 SNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKL 273
NL +YN +++ L ++G++ V M + D TY++++ CK A +
Sbjct: 273 PNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 274 LLSCLKSGVRILKSAQKAVVDGLRHSGCR 302
L+ G+ + L HS C+
Sbjct: 333 HAEMLRHGL----TPSVITYTSLIHSMCK 357
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 15/196 (7%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILI-------- 52
M+ + P T+++++NGL K T A R+ L VP VTY+ LI
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 53 -------KGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSA 105
KG C G + A + + + H P+ Y ++ R + +
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKE 665
Query: 106 MKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGK 165
M + G+ ++ A K G++ E + ++ + L+ + +EG
Sbjct: 666 MVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGN 725
Query: 166 LEAAYLLLDEMEKQGF 181
++ +L EM K GF
Sbjct: 726 MDVVLDVLAEMAKDGF 741
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P +NIM++G C+ A +++ + K GF+ VT L+K L K G++ +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 117
+ + S A +++ R + L++L+ M + G+ +G
Sbjct: 698 IVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 144 bits (364), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 147/279 (52%), Gaps = 10/279 (3%)
Query: 3 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 62
CG L P + NI++NGLC AL + + KHG P+ VTYNIL KG G +
Sbjct: 293 CG-LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMIS 351
Query: 63 TARWILKELGDSGHAPNAITYTTIM--KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
A +++++ D G +P+ ITYT ++ +C N +GL +L M +G+ + C+
Sbjct: 352 GAWEVIRDMLDKGLSPDVITYTILLCGQCQLGN--IDMGLVLLKDMLSRGFELNSIIPCS 409
Query: 121 V-IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 179
V ++ K GR+ EA QM DG+ D+V+Y+ +I+ CK GK + A L DEM +
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469
Query: 180 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
+ TH L+ GLC+ G + AR L+ + G ++ YN ++D K G I+ A
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 529
Query: 240 INVF----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLL 274
+ +F E+ T++S+++ CK + + A K+L
Sbjct: 530 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 568
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 145/302 (48%), Gaps = 5/302 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T++ +++GLC+ + ++A+ R + P +V++N ++ G CK G + A+ +
Sbjct: 231 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 290
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
G P+ ++ ++ LE+ S M + G D Y + F +G +
Sbjct: 291 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 350
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH-TI 190
A + + M+ G+ D+++Y L+ C+ G ++ +LL +M +GFE + ++
Sbjct: 351 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 410
Query: 191 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---- 246
++ GLCK G I A M G +L AY+ ++ L K GK D A+ +++ M
Sbjct: 411 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 470
Query: 247 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 306
+ +S T+ +++ LC+ L A LL S + SG + V+DG SGC EA
Sbjct: 471 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 530
Query: 307 KI 308
++
Sbjct: 531 EL 532
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 21/291 (7%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ PC+ +ML+GLCK D AL +F ++ G P+LV Y+I+I GLCK G+ A
Sbjct: 405 IIPCS----VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMAL 460
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
W+ E+ D PN+ T+ ++ + +L ++ G T D Y VI +
Sbjct: 461 WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGY 520
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K G ++EA + + ++ G+ + ++N+LI YCK + A +LD ++ G
Sbjct: 521 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 580
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGK---IDHAIN- 241
++T L+D GN K M G Y+ I L + K +H +
Sbjct: 581 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRE 640
Query: 242 -VFE-------SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 280
+FE ME + D TY++++ LC+ K L S + + L +KS
Sbjct: 641 RIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHL-SGAFVFLEIMKS 690
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 24/285 (8%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
+NI+++G K+ + AL +F+ + + G P + T+N LI G CK + AR IL +
Sbjct: 513 YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIK 572
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
G AP+ ++YTT+M K E+ MK +G Y + + + +
Sbjct: 573 LYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHE 632
Query: 133 EATDYMEQ------------MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+ + M ++G+ D ++YNT+I C+ L A++ L+ M+ +
Sbjct: 633 NCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRN 692
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ T+ ILID LC G I+ A + + + + AY ++ G + A+
Sbjct: 693 LDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 752
Query: 241 NVFESM-------EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCL 278
+F + ++D YS++++ LC+ + L + SK CL
Sbjct: 753 KLFHQLLHRGFNVSIRD---YSAVINRLCR-RHLVNESKFFF-CL 792
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 5/266 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF-VPELVTYNILIKGLCKAGRLRTA 64
L+P T+ I+L G C+ D L + + + GF + ++ ++++ GLCK GR+ A
Sbjct: 365 LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEA 424
Query: 65 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 124
+ ++ G +P+ + Y+ ++ + K+ + L + M K + + ++
Sbjct: 425 LSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLG 484
Query: 125 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
+ G L EA ++ +++ G LDIV YN +I+ Y K G +E A L + + G
Sbjct: 485 LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPS 544
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
T LI G CK NI AR L+ + G ++ +Y ++D G +
Sbjct: 545 VATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRR 604
Query: 245 SMEVK----DSFTYSSMVHNLCKAKR 266
M+ + + TYS + LC+ +
Sbjct: 605 EMKAEGIPPTNVTYSVIFKGLCRGWK 630
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 16/230 (6%)
Query: 6 LTPCTATFNIMLNGL--CKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
L P ++ +++ C N + + LR R ++ G P VTY+++ KGLC+ +
Sbjct: 576 LAPSVVSYTTLMDAYANCGNTKSIDELR--REMKAEGIPPTNVTYSVIFKGLCRGWKHEN 633
Query: 64 ARWILKE------------LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY 111
+L+E + G P+ ITY TI++ R + L MK +
Sbjct: 634 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 693
Query: 112 TFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYL 171
Y +I + G +++A ++ + V L +Y TLI +C +G E A
Sbjct: 694 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 753
Query: 172 LLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLE 221
L ++ +GF ++ +I+ LC+ + ++ M G +L+
Sbjct: 754 LFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPDLD 803
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 111/259 (42%), Gaps = 22/259 (8%)
Query: 33 FRGLQKHGFVPELVTYNILIKGLCKAGRLRT---ARWILKELGDSGHAPNAITYTTIMKC 89
FR + G V +++ + + RLR + +ILK++ D + +Y +++
Sbjct: 159 FRKWESTGLVWDMLLF--------LSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVL-- 208
Query: 90 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 149
+ R+ ++ +K K + Y TV+ + +L++A ++ +
Sbjct: 209 -YHFRETDKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPS 263
Query: 150 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 209
+VS+N++++ YCK G ++ A + K G Y+H ILI+GLC G+I A
Sbjct: 264 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 323
Query: 210 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAK 265
MNK G + + YN + G I A V M K D TY+ ++ C+
Sbjct: 324 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG 383
Query: 266 RLPSASKLLLSCLKSGVRI 284
+ LL L G +
Sbjct: 384 NIDMGLVLLKDMLSRGFEL 402
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 64
+L +AT+NI+++ LC Y A LQ+ Y LIK C G A
Sbjct: 692 NLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMA 751
Query: 65 RWILKELGDSGHAPNAITYTTIM-KCCFRN 93
+ +L G + Y+ ++ + C R+
Sbjct: 752 VKLFHQLLHRGFNVSIRDYSAVINRLCRRH 781
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 153/305 (50%), Gaps = 4/305 (1%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
FN +++ LCK R+ D+AL +F+ ++ G P +VTY+ LI LC GR A +L ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
+ PN +T+ ++ + K+ ++ M ++ D F Y ++I F RL
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 133 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 192
+A E MV+ D+ +YNTLI +CK ++E L EM +G D T+T LI
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK 249
GL G+ A+ + M G ++ Y+ ++D L +GK++ A+ VF+ M E+K
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 250 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
D + Y++M+ +CKA ++ L S GV+ ++ GL +EA +
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 309 QSKIR 313
K++
Sbjct: 488 LKKMK 492
Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 150/314 (47%), Gaps = 4/314 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T TF +++GL + A+ + + + G P LVTY +++ GLCK G + A +
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ + + + + TI+ + R L + M+ KG + Y ++I+
Sbjct: 173 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
GR +A+ + M+ + ++V++N LI+ + KEGK A L D+M K+ + D +T
Sbjct: 233 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ LI+G C + A+ E+M +L+ YN ++ K +++ +F M
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 248 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
V D+ TY++++ L +A K+ + GV ++DGL ++G
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 304 EAKKIQSKIRMAKI 317
+A ++ ++ ++I
Sbjct: 413 KALEVFDYMQKSEI 426
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 133/267 (49%), Gaps = 4/267 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T+NI++N C+ AL + + K G+ P +VT + L+ G C R+ A ++ ++
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ G+ P+ IT+TT++ F + K + ++ M ++G + Y V+ K G +
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A + + +M ++ D+V +NT+I+ CK ++ A L EME +G + T++ L
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
I LC G A L M + + NL +N ++D K+GK A + + M +
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Query: 250 --DSFTYSSMVHNLCKAKRLPSASKLL 274
D FTY+S+++ C RL A ++
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMF 313
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 127/262 (48%), Gaps = 4/262 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P TFN +++ K A ++ + K P++ TYN LI G C R
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A+ + + + P+ TY T++K ++++ + G E+ M +G D Y T
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I G A +QMV+DGV DI++Y+ L++ C GKLE A + D M+K
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ D Y +T +I+G+CKAG + ++ G N+ YN ++ L + A
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 241 NVFESME----VKDSFTYSSMV 258
+ + M+ + DS TY++++
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLI 507
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 145/306 (47%), Gaps = 6/306 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T + +LNG C + +A+ + + + G+ P+ +T+ LI GL + A +
Sbjct: 78 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 137
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ + G PN +TY ++ + L +L+ M+ D + T+I + K
Sbjct: 138 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 197
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+ +A + ++M T G++ ++V+Y++LI+ C G+ A LL +M ++ + T
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 188 HTILIDGLCKAGN-IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 246
LID K G ++ +LH + M K D ++ YN +++ ++D A +FE M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLH-DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 247 EVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 302
KD F TY++++ CK+KR+ ++L G+ ++ GL H G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 303 REAKKI 308
A+K+
Sbjct: 377 DNAQKV 382
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ D P T+N ++ G CK++ ++ +FR + G V + VTY LI+GL G
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
A+ + K++ G P+ +TY+ ++ N K + LE+ M++ D + Y T
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I K G++ + D + GV+ ++V+YNT+I+ C + L+ AY LL +M++ G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
D T+ LI + G+ + + M F + + + L DG++D +
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML-HDGRLDKS 553
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 39/309 (12%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P FN +L+ + K + D + + +Q+ G L TYNILI C+ ++ A +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ G+ P+ +T ++++ ++ + ++ M GY D + T+I
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+ EA +++MV G Q ++V+Y ++N CK G ++ A+ LL++ME E D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ID LCK + +D A+N+F+ ME
Sbjct: 188 FNTIIDSLCKYRH-----------------------------------VDDALNLFKEME 212
Query: 248 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
K + TYSS++ LC R AS+LL ++ + A++D G
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 304 EAKKIQSKI 312
EA+K+ +
Sbjct: 273 EAEKLHDDM 281
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 114/245 (46%), Gaps = 4/245 (1%)
Query: 78 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 137
P+ + ++ + +K+ L + + M+R G + + + Y +I F + ++ A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 138 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 197
+ +M+ G + IV+ ++L+N YC ++ A L+D+M + G+ D T T LI GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 198 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 253
A ++ M + G NL Y +V+ L K G ID A N+ ME D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 254 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIR 313
+++++ +LCK + + A L G+R +++ L G +A ++ S +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 314 MAKIS 318
KI+
Sbjct: 248 EKKIN 252
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+N M++GLC R A + + +++ G +P+ TYN LI+ + G + +
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 522
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 104
++E+ +A T + R K L++LS
Sbjct: 523 IREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDMLS 559
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 152/305 (49%), Gaps = 4/305 (1%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
++ +++ LCK R+ D+AL +F ++ G P ++TY+ LI LC R A +L ++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
+ PN +T+ ++ + K ++ M ++ D F Y ++I F RL
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 133 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 192
EA E M++ ++V+YNTLIN +CK +++ L EM ++G + T+T LI
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS- 251
G +A + A++ + M G N+ YN ++D L K+GK++ A+ VFE ++
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 252 ---FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
+TY+ M+ +CKA ++ L S GV+ ++ G G + EA +
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 309 QSKIR 313
K+R
Sbjct: 563 FRKMR 567
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 153/314 (48%), Gaps = 4/314 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T TF +++GL + A+ + + + G P LVTY +++ GLCK G + A +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ + N + Y+T++ + R L + + M+ KG + Y ++I+
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
R +A+ + M+ + ++V++N LI+ + KEGKL A L DEM K+ + D +T
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
++ LI+G C + A+ E M N+ YN +++ K +ID + +F M
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 248 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
V ++ TY++++H +A+ +A + + GV ++DGL +G
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 304 EAKKIQSKIRMAKI 317
+A + ++ +K+
Sbjct: 488 KAMVVFEYLQRSKM 501
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 124/246 (50%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P TFN +++ K A +++ + K P++ TY+ LI G C R
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 380
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A+ + + + PN +TY T++ + ++ G+E+ M ++G + Y T
Sbjct: 381 LDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTT 440
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I F + A +QMV+DGV +I++YNTL++ CK GKLE A ++ + +++
Sbjct: 441 LIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 500
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
E YT+ I+I+G+CKAG ++ ++ G ++ YN ++ + G + A
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEAD 560
Query: 241 NVFESM 246
+F M
Sbjct: 561 ALFRKM 566
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 132/267 (49%), Gaps = 4/267 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T+NI++N C+ AL + + K G+ P +VT + L+ G C R+ A ++ ++
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ G+ P+ IT+TT++ F + K + ++ M ++G + Y V+ K G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A + + +M ++ ++V Y+T+I+ CK + A L EME +G + T++ L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
I LC A L M + + N+ +N ++D K+GK+ A +++ M +
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 250 --DSFTYSSMVHNLCKAKRLPSASKLL 274
D FTYSS+++ C RL A +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMF 388
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 148/302 (49%), Gaps = 5/302 (1%)
Query: 15 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 74
I+ NGL + D+A+ +F G+ K +P + +N L+ + K + + +++
Sbjct: 56 ILRNGLHSMKL-DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 75 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 134
G + N TY ++ C R + L L +L M + GY +++ + R+ +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 135 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 194
++QMV G + D +++ TLI+ K A L+D M ++G + + T+ ++++G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 195 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----D 250
LCK G+I A L M ++N+ Y+ ++D L K D A+N+F ME K +
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 251 SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQS 310
TYSS++ LC +R AS+LL ++ + A++D G EA+K+
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 311 KI 312
++
Sbjct: 355 EM 356
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 93/187 (49%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI D P T+N ++NG CK + D + +FR + + G V VTY LI G +A
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
A+ + K++ G PN +TY T++ +N K + + + ++R + Y
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 510
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I K G++++ D + GV+ D++ YNT+I+ +C++G E A L +M + G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 181 FECDKYT 187
D T
Sbjct: 571 PLPDSGT 577
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 4/192 (2%)
Query: 130 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 189
+L +A MV I +N L++ K K + L ++M++ G + YT+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 190 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV- 248
ILI+ C+ I A L M K+G++ ++ + +++ +I A+ + + M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 249 ---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
D+ T+++++H L + A L+ ++ G + VV+GL G A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 306 KKIQSKIRMAKI 317
+ +K+ AKI
Sbjct: 245 FNLLNKMEAAKI 256
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 4/322 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI P T+NIM++ +CK + A +F ++ G VP+ VTYN +I G K GR
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L +E+ D P+ ITY ++ C + K +GLE MK G + Y T
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ AF K G +++A + M G+ + +Y +LI+ CK G L A+ L +EM + G
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
E + T+T LIDGLC A +K A M+ G NL +YN ++ K +D A+
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 241 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
+ ++ + D Y + + LC +++ +A ++ + G++ ++D
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 297 RHSGCRREAKKIQSKIRMAKIS 318
SG E + +++ I
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIE 574
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 122/242 (50%), Gaps = 1/242 (0%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P A++N +++G K + D AL + L+ G P+L+ Y I GLC ++ A+
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
++ E+ + G N++ YTT+M F++ GL +L MK +C +I
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Query: 126 VKIGRLKEATDYMEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
K + +A DY ++ D G+Q + + +I+ CK+ ++EAA L ++M ++G D
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
+ +T L+DG K GN+ A + M +IG +L AY +V L ++ A + E
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
Query: 245 SM 246
M
Sbjct: 708 EM 709
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 152/317 (47%), Gaps = 7/317 (2%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P +++ +++ CK A++ + +++ G VP TY LI CK G L A
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ E+ G N +TYT ++ + K E+ M G + Y +I F
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
VK + A + + ++ G++ D++ Y T I C K+EAA ++++EM++ G + +
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
+T L+D K+GN L+ M ++ + + + ++D L K+ + A++ F
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 246 ME-----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
+ ++ +++M+ LCK ++ +A+ L ++ G+ ++A +++DG G
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 301 CRREAKKIQSKIRMAKI 317
EA ++ K MA+I
Sbjct: 663 NVLEALALRDK--MAEI 677
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 39/293 (13%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T + N +L+ K TD+ R F+ + G P + TYNI+I +CK G + AR +
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+E+ G P+ +TY +++ DGFG K
Sbjct: 285 FEEMKFRGLVPDTVTYNSMI--------------------------DGFG---------K 309
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+GRL + + E+M + D+++YN LIN +CK GKL EM+ G + + +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV-FESM 246
++ L+D CK G ++ A M ++G N Y ++D K G + A + E +
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 247 EV---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
+V + TY++++ LC A+R+ A +L +GV ++ A++ G
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMF-RGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
D+ TF ++++GLCKN+ A+ F R G + +I GLCK ++
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 64 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 123
A + +++ G P+ YT++M F+ L + M G D Y +++
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691
Query: 124 AFVKIGRLKEATDYMEQMVTDGVQLDIV 151
+L++A ++E+M+ +G+ D V
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEV 719
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 150/292 (51%), Gaps = 6/292 (2%)
Query: 22 KNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAI 81
K R D L +FR + G + + I+++GLC+ G + ++ ++KE G P A
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 82 TYTTIMKCCFRNRKYKLGLE-ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQ 140
TY TI+ + R + G+E +L MK+ G ++ Y ++ VK G++ +A ++
Sbjct: 261 TYNTIINAYVKQRDFS-GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 141 MVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGN 200
M G++ D+ Y +LI+ C++G ++ A+LL DE+ ++G YT+ LIDG+CK G
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 201 IKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSS 256
+ A + + M G + +N ++D + G +D A +++ ME K D FT ++
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 257 MVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
+ + KR A + L ++ GV++ + ++D G EAK++
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L+P + T+ +++G+CK A + +Q G V +N LI G C+ G + A
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
I + G + T TI C R ++Y + L M G Y +I +
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K G ++EA +M + GVQ + ++YN +I YCK+GK++ A L ME G + D
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDS 539
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
YT+T LI G C A N+ A M G D N Y ++ L K GK D A +++
Sbjct: 540 YTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDE 599
Query: 246 MEVK----DSFTYSSMVHNL 261
M+ K D+ Y++++ ++
Sbjct: 600 MKRKGYTIDNKVYTALIGSM 619
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 147/339 (43%), Gaps = 39/339 (11%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P T+N ++N K R + + ++K G V VTY +L++ K G++ A
Sbjct: 255 IKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAE 314
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ E+ + G + YT+++ R K + + KG + + Y +I
Sbjct: 315 KLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGV 374
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K+G + A M +M + GV + V +NTLI+ YC++G ++ A ++ D ME++GF+ D
Sbjct: 375 CKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADV 434
Query: 186 YT-----------------------------------HTILIDGLCKAGNIKGARLHLEY 210
+T +T LID CK GN++ A+
Sbjct: 435 FTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE 494
Query: 211 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKR 266
M+ G N YN ++ K GKI A + +ME DS+TY+S++H C A
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 267 LPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
+ A +L G+ ++ GL +G EA
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ G + T ++ +++ CK + A R+F + G P +TYN++I CK G+
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 61 LRTARWILKELGDSGHAPNAITYTTIM--KCCFRNRKYKLGLEILSAMKRKGYTFDGFGY 118
++ AR + + +G P++ TYT+++ +C N + + S M KG + Y
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADN--VDEAMRLFSEMGLKGLDQNSVTY 577
Query: 119 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLI 157
+I+ K G+ EA ++M G +D Y LI
Sbjct: 578 TVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 149/310 (48%), Gaps = 4/310 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+ ++ LCKNR+ ++A+ +F + +G P +VTYN L+ GLC+ GR A W+
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L+++ PN IT+T ++ + K E+ + M + D F Y ++I
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
G L EA M +G + V Y TLI+ +CK ++E + EM ++G + T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+T+LI G C G A+ M+ ++ YN ++D L +GK++ A+ +FE M
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 248 VKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
++ TY+ ++ +CK ++ A L S G++ ++ G G
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 304 EAKKIQSKIR 313
EA + K++
Sbjct: 486 EADSLFKKMK 495
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 128/273 (46%), Gaps = 4/273 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P T NI+++ +C + A + K GF P+LVT+ L+ G C R+ A
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI 173
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ ++ G PN +TYTT+++C +NR +E+ + M G + Y ++
Sbjct: 174 ALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+IGR +A + M+ ++ +++++ LI+ + K GKL A L + M + D
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
+T+ LI+GLC G + AR M + G N Y ++ K +++ + +F
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE 353
Query: 246 ME----VKDSFTYSSMVHNLCKAKRLPSASKLL 274
M V ++ TY+ ++ C R A ++
Sbjct: 354 MSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P TF +++ K A ++ + + P++ TY LI GLC G L AR
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ + +G PN + YTT++ ++++ + G++I M +KG + Y +I +
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+GR A + QM + DI +YN L++ C GK+E A ++ + M K+ + +
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T+TI+I G+CK G ++ A + G N+ Y ++ + G I A ++F+
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 246 MEVKDSFTYSSMVH 259
M+ +D F + V+
Sbjct: 494 MK-EDGFLPNESVY 506
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 8/281 (2%)
Query: 8 PCTATFNIMLNGLCK-NRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 66
P F +L+ + K NRY D + +F +Q G P L T NI++ +C + + A
Sbjct: 81 PSIIDFTRLLSVIAKMNRY-DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 67 ILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
L ++ G P+ +T+T+++ C NR + + + + G+ + Y T+I
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNR-IEDAIALFDQILGMGFKPNVVTYTTLIRCL 198
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K L A + QM T+G + ++V+YN L+ C+ G+ A LL +M K+ E +
Sbjct: 199 CKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T T LID K G + A+ M ++ ++ Y +++ L G +D A +F
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 246 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
ME + Y++++H CK+KR+ K+ + GV
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 4/231 (1%)
Query: 82 TYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQM 141
+Y I++ N ++ L++ + M + +++ K+ R EQM
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 142 VTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNI 201
G+ + + N +++ C + A L +M K GFE D T T L++G C I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 202 KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS----FTYSSM 257
+ A + + +GF N+ Y ++ L K+ ++HA+ +F M S TY+++
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 258 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
V LC+ R A+ LL +K + A++D G EAK++
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 153/314 (48%), Gaps = 4/314 (1%)
Query: 4 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
G + ++ +++ LCK R+ D+AL +F + G P++ TY+ LI LC GR
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293
Query: 64 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 123
A +L ++ + PN +T+ +++ + K ++ M ++ + Y ++I
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 124 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 183
F RL EA MV+ D+V+YNTLIN +CK K+ L +M ++G
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 184 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 243
+ T+T LI G +A + A++ + M G N+ YN ++D L K+GK++ A+ VF
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 244 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 299
E ++ D +TY+ M +CKA ++ L S GV+ A ++ G
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 300 GCRREAKKIQSKIR 313
G + EA + K++
Sbjct: 534 GLKEEAYTLFIKMK 547
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 131/257 (50%), Gaps = 4/257 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P TFN +++ K A ++F + + P +VTYN LI G C RL A+
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
I + P+ +TY T++ + +K G+E+ M R+G + Y T+I F
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+ A +QMV+DGV +I++YNTL++ CK GKLE A ++ + ++K E D
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF-- 243
YT+ I+ +G+CKAG ++ ++ G ++ AYN ++ K G + A +F
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 244 --ESMEVKDSFTYSSMV 258
E + DS TY++++
Sbjct: 546 MKEDGPLPDSGTYNTLI 562
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 135/267 (50%), Gaps = 4/267 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T+NIM+N LC+ AL + + K G+ P +VT N L+ G C R+ A ++ ++
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ G+ P+ +T+TT++ F++ K + ++ M KG D Y VI K G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A + + +M ++ D+V Y+T+I+ CK ++ A L EM+ +G D +T++ L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
I LC G A L M + + N+ +N ++D K+GK+ A +F+ M +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 250 --DSFTYSSMVHNLCKAKRLPSASKLL 274
+ TY+S+++ C RL A ++
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIF 368
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 148/314 (47%), Gaps = 4/314 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T TF +++GL ++ A+ + + G P+LVTY +I GLCK G A +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ + + Y+T++ + R L + + M KG D F Y ++I+
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
GR +A+ + M+ + ++V++N+LI+ + KEGKL A L DEM ++ + + T
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ LI+G C + A+ M ++ YN +++ K K+ + +F M
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 248 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
V ++ TY++++H +A +A + + GV ++DGL +G
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 304 EAKKIQSKIRMAKI 317
+A + ++ +K+
Sbjct: 468 KAMVVFEYLQKSKM 481
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 117/237 (49%), Gaps = 1/237 (0%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ D P T+N ++NG CK + + + +FR + + G V VTY LI G +A
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
A+ + K++ G PN +TY T++ +N K + + + +++ D + Y
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+ K G++++ D + GV+ D+++YNT+I+ +CK+G E AY L +M++ G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 237
D T+ LI + G+ + ++ M F + Y + D L DG++D
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLD 606
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 4/279 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T N +LNG C A+ + + + G+ P+ VT+ L+ GL + + A +
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
++ + G P+ +TY ++ + + L L +L+ M++ D Y TVI + K
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+ +A + +M G++ D+ +Y++LI+ C G+ A LL +M ++ + T
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
LID K G + A + M + D N+ YN +++ ++D A +F M
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 248 VKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
KD TY+++++ CKAK++ +L + G+
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 4/286 (1%)
Query: 27 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 86
D A+ +F + K P +V ++ L+ + K + +++ G + N TY +
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 87 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 146
+ C R + L IL M + GY +++ F R+ EA ++QMV G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 147 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 206
Q D V++ TL++ + K A L++ M +G + D T+ +I+GLCK G A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 207 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 262
L M K ++++ Y+ ++D L K +D A+N+F M+ K D FTYSS++ LC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 263 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
R AS+LL L+ + +++D G EA+K+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 110 GYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAA 169
G ++DG+ A + + +L EA D +MV IV ++ L++ K K +
Sbjct: 26 GLSYDGYREKLSRNALLHL-KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLV 84
Query: 170 YLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDR 229
++ME G + YT+ I+I+ LC+ + A L M K+G+ ++ N +++
Sbjct: 85 ISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNG 144
Query: 230 LGKDGKIDHAINVFESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRIL 285
+I A+ + + M D+ T++++VH L + + A L+ + G +
Sbjct: 145 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 204
Query: 286 KSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 317
AV++GL G A + +K+ KI
Sbjct: 205 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKI 236
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P +N M++G CK + A +F +++ G +P+ TYN LI+ + G + +
Sbjct: 518 PDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 577
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 104
+KE+ A +A TY + R K LE+LS
Sbjct: 578 IKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVLS 614
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 138 bits (348), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 150/309 (48%), Gaps = 4/309 (1%)
Query: 4 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
G + P +N +++ LC + ++AL +F + G P +VTYN LI+ LC GR
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 64 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 123
A +L ++ + PN +T++ ++ + K ++ M ++ D F Y ++I
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 124 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 183
F RL EA E M++ ++V+YNTLI +CK +++ L EM ++G
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 184 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 243
+ T+T LI G +A A++ + M G ++ Y+ ++D L +GK++ A+ VF
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 244 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 299
E ++ D +TY+ M+ +CKA ++ L S GV+ ++ G
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 300 GCRREAKKI 308
G + EA +
Sbjct: 550 GLKEEADAL 558
Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 144/297 (48%), Gaps = 4/297 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P + TFN +++GL ++ A+ + + G P+LVTY I++ GLCK G + A +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
LK++ P + Y TI+ + L + + M KG + Y ++I
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
GR +A+ + M+ + ++V+++ LI+ + KEGKL A L DEM K+ + D +T
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
++ LI+G C + A+ E M N+ YN ++ K ++D + +F M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 248 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
V ++ TY++++H +A+ +A + + GV ++DGL ++G
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 133/262 (50%), Gaps = 4/262 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P TF+ +++ K A +++ + K P++ TY+ LI G C R
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A+ + + + PN +TY T++K + ++ G+E+ M ++G + Y T
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I F + A +QMV+DGV DI++Y+ L++ C GK+E A ++ + +++
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
E D YT+ I+I+G+CKAG ++ ++ G N+ Y ++ + G + A
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 241 NVFESME----VKDSFTYSSMV 258
+F M+ + DS TY++++
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLI 578
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 143/290 (49%), Gaps = 4/290 (1%)
Query: 27 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 86
D+A+ +F + K P +V ++ L+ + K + + +++ + G + N TY+ +
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 87 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 146
+ C R + L L +L+ M + GY D +++ F R+ +A + QMV G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 147 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 206
Q D ++NTLI+ + + A L+D M +G + D T+ I+++GLCK G+I A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 207 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 262
L+ M + + + YN I+D L ++ A+N+F M+ K + TY+S++ LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 263 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
R AS+LL ++ + A++D G EA+K+ ++
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T++I++N C+ AL + + K G+ P++VT N L+ G C R+ A ++ ++
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ G+ P++ T+ T++ FR+ + + ++ M KG D Y V+ K G +
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A +++M ++ +V YNT+I+ C + A L EM+ +G + T+ L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
I LC G A L M + + N+ ++ ++D K+GK+ A +++ M +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 250 --DSFTYSSMVHNLCKAKRLPSASKLL 274
D FTYSS+++ C RL A +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMF 384
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 4/279 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P F+ +L+ + K D + + +Q G L TY+ILI C+ +L A +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ G+ P+ +T +++ + + ++ M GY D F + T+I +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
R EA +++MV G Q D+V+Y ++N CK G ++ A LL +ME+ E
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ +ID LC N+ A M+ G N+ YN ++ L G+ A + M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 248 VK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
+ + T+S+++ K +L A KL +K +
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 130 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 189
+L +A + MV IV ++ L++ K K + L ++M+ G + YT++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 190 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--- 246
ILI+ C+ + A L M K+G++ ++ N +++ +I A+++ M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 247 -EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
DSFT+++++H L + R A L+ + G + VV+GL G A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 306 KKIQSKIRMAKI 317
+ K+ KI
Sbjct: 241 LSLLKKMEQGKI 252
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 151/313 (48%), Gaps = 5/313 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ P T+ ++NGLCK D AL + ++K ++V YN +I GLCK
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A + ++ G P+ TY ++ C ++ +LS M K D +
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 121 VIAAFVKIGRLKEATDYMEQMV-TDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 179
+I AFVK G+L EA ++MV + D+V+YNTLI +CK ++E + EM ++
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 180 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
G + T+T LI G +A + A++ + M G ++ YN ++D L +G ++ A
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Query: 240 INVFESMEVKDS----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 295
+ VFE M+ +D TY++M+ LCKA ++ L S GV+ ++ G
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505
Query: 296 LRHSGCRREAKKI 308
G + EA +
Sbjct: 506 FCRKGLKEEADAL 518
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 139/283 (49%), Gaps = 5/283 (1%)
Query: 4 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
G + +N +++GLCK ++ D+A +F ++ G P++ TYN LI LC GR
Sbjct: 244 GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD 303
Query: 64 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF-DGFGYCTVI 122
A +L ++ + P+ + + ++ + K ++ M + + F D Y T+I
Sbjct: 304 ASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Query: 123 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFE 182
F K R++E + +M G+ + V+Y TLI+ + + + A ++ +M G
Sbjct: 364 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423
Query: 183 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 242
D T+ IL+DGLC GN++ A + EYM K ++ Y +++ L K GK++ ++
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483
Query: 243 FESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG 281
F S+ +K + TY++M+ C+ A L + + G
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 136/276 (49%), Gaps = 5/276 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T++I +N C+ AL + + K G+ P +VT N L+ G C R+ A ++ ++
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ G+ P+ +T+TT++ F++ K + ++ M KG D Y VI K G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A + + +M ++ D+V YNT+I+ CK ++ A+ L ++ME +G + D +T+ L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 247
I LC G A L M + + +L +N ++D K+GK+ A +++ M
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 248 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
D Y++++ CK KR+ ++ + G+
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL 387
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 140/294 (47%), Gaps = 4/294 (1%)
Query: 27 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 86
D+A+ +F + K P +V ++ L+ + K + + +++ + G + N TY+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 87 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 146
+ R + L L IL M + GY +++ F R+ EA ++QMV G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 147 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 206
Q D V++ TL++ + K A L++ M +G + D T+ +I+GLCK G A
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 207 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 262
L M K ++++ YN I+D L K +D A ++F ME K D FTY+ ++ LC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 263 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAK 316
R AS+LL L+ + A++D G EA+K+ ++ +K
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 112/233 (48%), Gaps = 1/233 (0%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P +N ++ G CK + + + +FR + + G V VTY LI G +A A+ +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
K++ G P+ +TY ++ N + L + M+++ D Y T+I A K
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
G++++ D + GV+ ++V+Y T+++ +C++G E A L EM++ G + T
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ LI + G+ + ++ M GF + + + + L DG++D +
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKSF 585
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 4/192 (2%)
Query: 130 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 189
+L +A MV IV ++ L++ K K + L ++M+ G + YT++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 190 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--- 246
I I+ C+ + A L M K+G+ ++ N +++ +I A+ + + M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 247 -EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
D+ T++++VH L + + A L+ + G + AV++GL G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 306 KKIQSKIRMAKI 317
+ +K+ KI
Sbjct: 235 LNLLNKMEKGKI 246
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+ M++G C+ + A +F +++ G +P TYN LI+ + G + +
Sbjct: 494 PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAEL 553
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 104
+KE+ G A +A T+ + R K L++LS
Sbjct: 554 IKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDMLS 590
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 139/258 (53%), Gaps = 4/258 (1%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
++ +++ LCK R+ D+AL +F ++ G P ++TY+ LI LC GR A +L ++
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
+ PN +T++ ++ + K ++ M ++ + F Y ++I F + RL
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 133 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 192
EA +E M+ ++V+YNTLIN +CK +++ L EM ++G + T+T LI
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 248
G +A + A++ + M +G N+ YN ++D L K+GK+ A+ VFE ++
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 249 KDSFTYSSMVHNLCKAKR 266
D +TY+ M+ +CKA +
Sbjct: 496 PDIYTYNIMIEGMCKAGK 513
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 147/297 (49%), Gaps = 4/297 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T TF +++GL + A+ + + + G P+LVTY ++ GLCK G A +
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ + N + Y+T++ + R L + + M+ KG + Y ++I+
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
GR +A+ + M+ + ++V+++ LI+ + K+GKL A L +EM K+ + + +T
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
++ LI+G C + A+ LE M + N+ YN +++ K ++D + +F M
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420
Query: 248 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
V ++ TY++++H +A+ +A + + GV ++DGL +G
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 477
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 135/268 (50%), Gaps = 6/268 (2%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T+NI++N C+ AL + + K G+ P++VT N L+ G C R+ A ++ ++
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ G+ P+ +T+TT++ F + K + ++ M ++G D Y V+ K G
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A + + +M ++ ++V Y+T+I+ CK + A L EME +G + T++ L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 251
I LC G A L M + + NL ++ ++D K GK+ A ++E M +K S
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM-IKRS 353
Query: 252 -----FTYSSMVHNLCKAKRLPSASKLL 274
FTYSS+++ C RL A ++L
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQML 381
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P TF+ +++ K A +++ + K P + TY+ LI G C R
Sbjct: 314 MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A+ +L+ + PN +TY T++ + ++ G+E+ M ++G + Y T
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I F + A +QMV+ GV +I++YN L++ CK GKL A ++ + +++
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 493
Query: 181 FECDKYTHTILIDGLCKAGNIK 202
E D YT+ I+I+G+CKAG K
Sbjct: 494 MEPDIYTYNIMIEGMCKAGKWK 515
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
Query: 27 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 86
D+A+ +F + + P ++ ++ L+ + K + +++ G + N TY +
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 87 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 146
+ C R + L L +L M + GY D +++ F R+ +A ++QMV G
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 147 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 206
+ D V++ TLI+ K A L+D M ++G + D T+ +++GLCK G+ A
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 207 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLC 262
L M ++N+ Y+ ++D L K D A+N+F ME K + TYSS++ LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 263 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
R AS+LL ++ + A++D G +A+K+ ++
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 4/252 (1%)
Query: 71 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 130
+ S P+ I ++ ++ + K+ L + M+ G + + + Y +I F + R
Sbjct: 69 MAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSR 128
Query: 131 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 190
L A + +M+ G + DIV+ N+L+N +C ++ A L+D+M + G++ D T T
Sbjct: 129 LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT 188
Query: 191 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK- 249
LI GL A ++ M + G +L Y +V+ L K G D A+N+ ME
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
Query: 250 ---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 306
+ YS+++ +LCK + A L GVR +++ L + G +A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 307 KIQSKIRMAKIS 318
++ S + KI+
Sbjct: 309 RLLSDMIERKIN 320
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 35/134 (26%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV------------------ 42
MI D P T+N ++NG CK + D + +FR + + G V
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 43 -----------------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 85
P ++TYNIL+ GLCK G+L A + + L S P+ TY
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503
Query: 86 IMKCCFRNRKYKLG 99
+++ + K+K+G
Sbjct: 504 MIEGMCKAGKWKMG 517
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 147/306 (48%), Gaps = 4/306 (1%)
Query: 7 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 66
TP +++ ++NG C+ D ++ +++ G P Y +I LC+ +L A
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 67 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 126
E+ G P+ + YTT++ + + + M + T D Y +I+ F
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 127 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 186
+IG + EA +M G++ D V++ LIN YCK G ++ A+ + + M + G +
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 187 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 246
T+T LIDGLCK G++ A L M KIG N+ YN IV+ L K G I+ A+ +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 247 EV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 302
E D+ TY++++ CK+ + A ++L L G++ +++G G
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 303 REAKKI 308
+ +K+
Sbjct: 578 EDGEKL 583
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 156/304 (51%), Gaps = 6/304 (1%)
Query: 10 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 69
A++NI+++ +C+ A + ++ G+ P++++Y+ ++ G C+ G L +++
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 70 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 129
+ G PN+ Y +I+ R K E S M R+G D Y T+I F K G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 130 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 189
++ A+ + +M + + D+++Y +I+ +C+ G + A L EM +G E D T T
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 190 ILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME- 247
LI+G CKAG++K A R+H +M + G N+ Y ++D L K+G +D A + M
Sbjct: 426 ELINGYCKAGHMKDAFRVH-NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 248 ---VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 304
+ FTY+S+V+ LCK+ + A KL+ +G+ ++D SG +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 305 AKKI 308
A++I
Sbjct: 545 AQEI 548
Score = 124 bits (311), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 147/313 (46%), Gaps = 4/313 (1%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 64
D+TP T+ +++G C+ A ++F + G P+ VT+ LI G CKAG ++ A
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 65 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 124
+ + +G +PN +TYTT++ + E+L M + G + F Y +++
Sbjct: 441 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNG 500
Query: 125 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
K G ++EA + + G+ D V+Y TL++ YCK G+++ A +L EM +G +
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
T +L++G C G ++ L +M G N +N +V + + A +++
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 245 SMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
M + D TY ++V CKA+ + A L G + S ++ G
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 301 CRREAKKIQSKIR 313
EA+++ ++R
Sbjct: 681 KFLEAREVFDQMR 693
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 8/298 (2%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M C L P + TF ++NG CK + +A R+ + + G P +VTY LI GLCK G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L +A +L E+ G PN TY +I+ ++ + ++++ + G D Y T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ A+ K G + +A + +++M+ G+Q IV++N L+N +C G LE LL+ M +G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ T L+ C N+K A + M G + + Y +V K + A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 241 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 294
+F+ M+ K TYS ++ K K+ A ++ + G+ +A K + D
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL----AADKEIFD 705
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 4/286 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P T + +++G CK A + F + P+++TY +I G C+ G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A + E+ G P+++T+T ++ + K + + M + G + + Y T
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I K G L A + + +M G+Q +I +YN+++N CK G +E A L+ E E G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
D T+T L+D CK+G + A+ L+ M G + +N +++ G ++
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 241 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
+ M K ++ T++S+V C L +A+ + GV
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 116/241 (48%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P T+N ++NGLCK+ + A+++ + G + VTY L+ CK+G + A+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
ILKE+ G P +T+ +M + + G ++L+ M KG + + +++ +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
LK AT + M + GV D +Y L+ +CK ++ A+ L EM+ +GF
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T+++LI G K AR + M + G ++ E ++ D K + D ++ +
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDE 726
Query: 246 M 246
+
Sbjct: 727 I 727
Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 144/347 (41%), Gaps = 40/347 (11%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK-AGRLRTARWILKE 70
F++ L A R+F + +G V + + N+ + L K + TA + +E
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 71 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 130
+ G N +Y ++ + + K +L M+ KGYT D Y TV+ + + G
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 131 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 190
L + +E M G++ + Y ++I L C+ KL A EM +QG D +T
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 191 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---- 246
LIDG CK G+I+ A M+ ++ Y I+ + G + A +F M
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 247 -------------------EVKDSF----------------TYSSMVHNLCKAKRLPSAS 271
+KD+F TY++++ LCK L SA+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 272 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKIS 318
+LL K G++ ++V+GL SG EA K+ + A ++
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 10/208 (4%)
Query: 111 YTFDGFG-----YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKE-G 164
YT+ +G + V G L+EA E+M+ G+ L + S N + K+
Sbjct: 166 YTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY 225
Query: 165 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 224
K A ++ E + G + ++ I+I +C+ G IK A L M G+ ++ +Y+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 225 CIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 280
+V+ + G++D + E M+ K +S+ Y S++ LC+ +L A + ++
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 281 GVRILKSAQKAVVDGLRHSGCRREAKKI 308
G+ ++DG G R A K
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKF 373
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 153/306 (50%), Gaps = 6/306 (1%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
++I+++ LCK+ D+AL +F ++ G ++VTY+ LI GLC G+ +L+E+
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
P+ +T++ ++ + K E+ + M +G D Y ++I F K L
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 133 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 192
EA + MV+ G + DIV+Y+ LIN YCK +++ L E+ +G + T+ L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF 252
G C++G + A+ + M G ++ Y ++D L +G+++ A+ +FE M+ K
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ-KSRM 486
Query: 253 T-----YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 307
T Y+ ++H +C A ++ A L S GV+ ++ GL G EA
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 308 IQSKIR 313
+ K++
Sbjct: 547 LFRKMK 552
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 156/315 (49%), Gaps = 4/315 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T + ++NGLC AL + + ++GF P+ VTY ++ LCK+G A +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+++ + + + Y+ ++ ++ + L + + M+ KG D Y ++I
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
G+ + + +M+ + D+V+++ LI+++ KEGKL A L +EM +G D T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ LIDG CK + A + M G + ++ Y+ +++ K ++D + +F +
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 248 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
+ ++ TY+++V C++ +L +A +L + GV ++DGL +G
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 304 EAKKIQSKIRMAKIS 318
+A +I K++ ++++
Sbjct: 473 KALEIFEKMQKSRMT 487
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 146/299 (48%), Gaps = 5/299 (1%)
Query: 18 NGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHA 77
NG+ + D A+ +F + + +P + +N L + + + K + +G
Sbjct: 44 NGIVDIKVND-AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIE 102
Query: 78 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 137
+ T T ++ C R +K +L + GY D + T++ F GR+ EA
Sbjct: 103 HDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVAL 162
Query: 138 MEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK 197
+++MV + D+V+ +TLIN C +G++ A +L+D M + GF+ D+ T+ +++ LCK
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222
Query: 198 AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFT 253
+GN A M + +++ Y+ ++D L KDG D A+++F ME+K D T
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 254 YSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
YSS++ LC + +K+L + + A++D G EAK++ +++
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 7/281 (2%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P T T+N +++G CK A +MF + G P++VTY+ILI CKA R
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ + +E+ G PN ITY T++ ++ K E+ M +G Y
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ G L +A + E+M + L I YN +I+ C K++ A+ L + +G
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV-DRLGKDGKIDHA 239
+ D T+ ++I GLCK G++ A + M + G + YN ++ LG G I +
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLI-SS 579
Query: 240 INVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLS 276
+ + E M+V DS T MV ++ +RL + +LS
Sbjct: 580 VELIEEMKVCGFSADSSTI-KMVIDMLSDRRLDKSFLDMLS 619
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 135/300 (45%), Gaps = 4/300 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI ++ P TF+ +++ K A ++ + G P+ +TYN LI G CK
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A + + G P+ +TY+ ++ + ++ G+ + + KG + Y T
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ F + G+L A + ++MV+ GV +V+Y L++ C G+L A + ++M+K
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ I+I G+C A + A ++ G ++ YN ++ L K G + A
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
+F M+ D FTY+ ++ L S+ +L+ G S K V+D L
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 131/269 (48%), Gaps = 8/269 (2%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T IM+N C+ + A + K G+ P+ +T++ L+ G C GR+ A ++ +
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 72 GDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 130
+ P+ +T +T++ C + R + L ++ M G+ D Y V+ K G
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSE-ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 225
Query: 131 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 190
A D +M ++ +V Y+ +I+ CK+G + A L +EME +G + D T++
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 191 LIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK 249
LI GLC G GA++ E + + ++ ++ ++D K+GK+ A ++ M +
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 250 ----DSFTYSSMVHNLCKAKRLPSASKLL 274
D+ TY+S++ CK L A+++
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMF 373
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 144/276 (52%), Gaps = 9/276 (3%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P +N +++G CK ++A+ +F +++ G + VTYN L+ GLC +GR A +
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
++++ PN IT+T ++ + K+ +++ M R+ D F Y ++I
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCM 291
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
GR+ EA ++ MVT G D+V+YNTLIN +CK +++ L EM ++G D T
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ +I G +AG A+ E +++ N+ Y+ ++ L + +++ A+ +FE+M+
Sbjct: 352 YNTIIQGYFQAGRPDAAQ---EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 248 VK----DSFTYSSMVHNLCKAKRLPSASKLL--LSC 277
D TY+ ++H +CK + A L LSC
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 145/293 (49%), Gaps = 7/293 (2%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T + ++NG C+ +A+ + +++ GF P++V YN +I G CK G + A +
Sbjct: 137 PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196
Query: 68 LKELGDSGHAPNAITYTTIMK--CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ G +A+TY +++ CC + ++ ++ M + + + VI F
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCC--SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
VK G+ EA E+M V D+ +YN+LIN C G+++ A +LD M +G D
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 186 YTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
T+ LI+G CK+ + +G +L E M + G + YN I+ + G+ D A +F
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFRE-MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 245 SMEVKDSF-TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
M+ + + TYS +++ LC R+ A L + KS + + + V+ G+
Sbjct: 374 RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 157/317 (49%), Gaps = 6/317 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI P F+ +L+ + K++ D + +F ++ G +L +YNI+I LC+ R
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 119
A ++ ++ G+ P+ +T ++++ C NR + ++++S M+ G+ D Y
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYN 178
Query: 120 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 179
T+I KIG + +A + ++M DGV+ D V+YN+L+ C G+ A L+ +M +
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 180 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
+ T T +ID K G A E M + D ++ YN +++ L G++D A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 240 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 295
+ + M K D TY+++++ CK+KR+ +KL + G+ ++ G
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 296 LRHSGCRREAKKIQSKI 312
+G A++I S++
Sbjct: 359 YFQAGRPDAAQEIFSRM 375
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 123/247 (49%), Gaps = 3/247 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ D+ P TF +++ K A++++ + + P++ TYN LI GLC GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A+ +L + G P+ +TY T++ ++++ G ++ M ++G D Y T
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I + + GR A + +M + + +I +Y+ L+ C ++E A +L + M+K
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
E D T+ I+I G+CK GN++ A ++ G ++ +Y ++ + + D +
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSD 471
Query: 241 NVFESME 247
++ M+
Sbjct: 472 LLYRKMQ 478
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 94/174 (54%), Gaps = 3/174 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+N ++NG CK++ D ++FR + + G V + +TYN +I+G +AGR A+ I
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ DS PN TY+ ++ N + + L + M++ D Y VI K
Sbjct: 372 FSRM-DS--RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK 428
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 181
IG +++A D + G++ D+VSY T+I+ +C++ + + + LL +M++ G
Sbjct: 429 IGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 39/221 (17%)
Query: 131 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 190
L+E D +M+ IV ++ +++ K + L ME G D Y++ I
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 191 LIDGLCK------AGNIKGARLHLEY-----------------------------MNKIG 215
+I+ LC+ A ++ G + Y M ++G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 216 FDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSAS 271
F ++ YN I+D K G ++ A+ +F+ ME D+ TY+S+V LC + R A+
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 272 KLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
+L+ + + AV+D G EA K+ ++
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 39/68 (57%)
Query: 11 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 70
T+NI+++G+CK ++A +FR L G P++V+Y +I G C+ + + + ++
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
Query: 71 LGDSGHAP 78
+ + G P
Sbjct: 477 MQEDGLLP 484
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 138/281 (49%), Gaps = 4/281 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P +FN ++NG CK D R+ ++K P++ TY+ LI LCK ++ A
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ E+ G PN + +TT++ RN + L E M KG D Y T++ F
Sbjct: 331 GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGF 390
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K G L A + ++ M+ G++ D ++Y TLI+ +C+ G +E A + EM++ G E D+
Sbjct: 391 CKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDR 450
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
+ L+ G+CK G + A L M + G + Y ++D K G + +
Sbjct: 451 VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 246 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
M+ V TY+ +++ LCK ++ +A LL + L GV
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 133/267 (49%), Gaps = 4/267 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
FNI++N CK +A ++F + K P +V++N LI G CK G L + ++
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
S P+ TY+ ++ + K + M ++G + + T+I + G +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
+ ++M++ G+Q DIV YNTL+N +CK G L AA ++D M ++G DK T+T L
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 247
IDG C+ G+++ A + M++ G + + ++ +V + K+G++ A M
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 248 VKDSFTYSSMVHNLCKAKRLPSASKLL 274
D TY+ M+ CK + KLL
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLL 508
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 131/267 (49%), Gaps = 11/267 (4%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P F +++G +N D ++ + G P++V YN L+ G CK G L AR
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR 400
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
I+ + G P+ ITYTT++ R + LEI M + G D G+ ++
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGM 460
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K GR+ +A + +M+ G++ D V+Y +++ +CK+G + + LL EM+ G
Sbjct: 461 CKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV 520
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA------ 239
T+ +L++GLCK G +K A + L+ M IG + YN ++ +G HA
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL-----EGHHRHANSSKRY 575
Query: 240 INVFESMEVKDSFTYSSMVHNLCKAKR 266
I E V D +Y S+V+ L +A +
Sbjct: 576 IQKPEIGIVADLASYKSIVNELDRASK 602
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 100 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 159
+EIL A G+ + + + ++ F K G + +A +++ +Q +VS+NTLIN
Sbjct: 229 MEILDA----GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 160 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 219
YCK G L+ + L +MEK D +T++ LI+ LCK + GA + M K G N
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 220 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 275
+ ++ ++G+ID ++ M K D Y+++V+ CK L +A ++
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD 404
Query: 276 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
++ G+R K ++DG G A +I+ ++
Sbjct: 405 GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 117/272 (43%), Gaps = 39/272 (14%)
Query: 40 GFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG 99
GF + +NIL+ CK G + A+ + E+ P +++ T++
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLIN----------- 283
Query: 100 LEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINL 159
GYC K+G L E QM + D+ +Y+ LIN
Sbjct: 284 -----------------GYC-------KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA 319
Query: 160 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 219
CKE K++ A+ L DEM K+G + T LI G + G I + + M G +
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 220 LEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLL 275
+ YN +V+ K+G + A N+ + M + D TY++++ C+ + +A ++
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439
Query: 276 SCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 307
++G+ + + A+V G+ G +A++
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAER 471
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI L P T+ +++G C+ + AL + + + ++G + V ++ L+ G+CK GR
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A L+E+ +G P+ +TYT +M + + G ++L M+ G+ Y
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ K+G++K A ++ M+ GV D ++YNTL+ + + Y+ E+ G
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI---G 582
Query: 181 FECDKYTHTILIDGLCKAG 199
D ++ +++ L +A
Sbjct: 583 IVADLASYKSIVNELDRAS 601
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 149/309 (48%), Gaps = 4/309 (1%)
Query: 4 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
G + + +++ LC + ++AL +F + G P +VTYN LI+ LC GR
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 64 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 123
A +L ++ + PN +T++ ++ + K ++ M ++ D F Y ++I
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 124 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 183
F RL EA E M++ ++V+YNTLI +CK ++E L EM ++G
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 184 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 243
+ T+ LI GL +AG+ A+ + M G ++ Y+ ++D L K GK++ A+ VF
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 244 ESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 299
E ++ D +TY+ M+ +CKA ++ L S GV+ ++ G
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 300 GCRREAKKI 308
G + EA +
Sbjct: 549 GLKEEADAL 557
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 133/265 (50%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P TF+ +++ K A +++ + K P++ TY+ LI G C R
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A+ + + + PN +TY T++K + ++ + G+E+ M ++G + Y T
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I + G A ++MV+DGV DI++Y+ L++ CK GKLE A ++ + ++K
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
E D YT+ I+I+G+CKAG ++ ++ G N+ Y ++ + G + A
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 241 NVFESMEVKDSFTYSSMVHNLCKAK 265
+F M+ + S + L +A+
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRAR 580
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 140/300 (46%), Gaps = 4/300 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M + P T TFN +++GL + A+ + + G P+L TY ++ GLCK G
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A +LK++ + + YTTI+ + L + + M KG + Y +
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I GR +A+ + M+ + ++V+++ LI+ + KEGKL A L DEM K+
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ D +T++ LI+G C + A+ E M N+ YN ++ K +++ +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
+F M V ++ TY++++ L +A A K+ + GV ++DGL
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 129/267 (48%), Gaps = 4/267 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
++NI++N C+ AL + + K G+ P++VT + L+ G C R+ A ++ ++
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ PN +T+ T++ F + K + ++ M +G D F Y TV+ K G +
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A +++M ++ D+V Y T+I+ C + A L EM+ +G + T+ L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
I LC G A L M + + N+ ++ ++D K+GK+ A +++ M +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 250 --DSFTYSSMVHNLCKAKRLPSASKLL 274
D FTYSS+++ C RL A +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMF 383
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 140/309 (45%), Gaps = 4/309 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T + +LNG C + A+ + + + P VT+N LI GL + A +
Sbjct: 148 PDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVAL 207
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ + G P+ TY T++ + L L +L M++ D Y T+I A
Sbjct: 208 IDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+ +A + +M G++ ++V+YN+LI C G+ A LL +M ++ + T
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 327
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ LID K G + A + M K D ++ Y+ +++ ++D A ++FE M
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 248 VKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
KD F TY++++ CKAKR+ +L + G+ ++ GL +G
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 304 EAKKIQSKI 312
A+KI K+
Sbjct: 448 MAQKIFKKM 456
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 5/280 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P T++ ++NG C + D A MF + P +VTYN LIKG CKA R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ + +E+ G N +TY T+++ F+ + +I M G D Y
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ K G+L++A E + ++ DI +YN +I CK GK+E + L + +G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ + +T +I G C+ G + A M + G N YN ++ +DG +
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLS 276
+ + M V D+ T SMV N+ RL + +LS
Sbjct: 591 ELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSYLEMLS 629
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 127/292 (43%), Gaps = 39/292 (13%)
Query: 60 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 119
+L A + E+ S P+ + + ++ + K+ L + + M+ ++D + Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 120 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCK----------------- 162
+I F + +L A + +M+ G + DIV+ ++L+N YC
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 163 ------------------EGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 204
K A L+D M +G + D +T+ +++GLCK G+I A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 205 RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHN 260
L+ M K ++++ Y I+D L ++ A+N+F M+ K + TY+S++
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 261 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
LC R AS+LL ++ + A++D G EA+K+ ++
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 84/192 (43%), Gaps = 4/192 (2%)
Query: 130 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 189
+L +A D +MV IV +N L++ K K + L + M+ D Y++
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 190 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV- 248
ILI+ C+ + A L M K+G++ ++ + +++ +I A+ + + M V
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 249 ---KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
++ T+++++H L + A L+ + G + VV+GL G A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 306 KKIQSKIRMAKI 317
+ K+ KI
Sbjct: 240 LSLLKKMEKGKI 251
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 152/306 (49%), Gaps = 4/306 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T++ +++ LC++ D A+ +F+ ++ G +VTYN L++GLCKAG+ +LK++
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
PN IT+ ++ + K + E+ M +G + + Y T++ + RL
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
EA + ++ MV + DIV++ +LI YC +++ + + K+G + T++IL
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDS 251
+ G C++G IK A + M G ++ Y ++D L +GK++ A+ +FE ++
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 252 ----FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 307
Y++++ +CK ++ A L S GV+ ++ GL G EA
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 308 IQSKIR 313
+ K+
Sbjct: 530 LLRKME 535
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 139/293 (47%), Gaps = 4/293 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T NIM+N C+ T A + + K G+ P+ T+N LIKGL G++ A ++ +
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
++G P+ +TY +I+ R+ L L++L M+ + D F Y T+I + + G +
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
A ++M T G++ +V+YN+L+ CK GK LLL +M + + T +L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME---- 247
+D K G ++ A + M G N+ YN ++D ++ A N+ + M
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 248 VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
D T++S++ C KR+ K+ + K G+ +V G SG
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 148/300 (49%), Gaps = 4/300 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ ++ P TFN++L+ K A +++ + G P ++TYN L+ G C R
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L A +L + + +P+ +T+T+++K ++ G+++ + ++G + Y
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ F + G++K A + ++MV+ GV D+++Y L++ C GKLE A + ++++K
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ +T +I+G+CK G ++ A + G N+ Y ++ L K G + A
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 528
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
+ ME + TY++++ + L +++KL+ G S+ K V+D L
Sbjct: 529 ILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 123/233 (52%), Gaps = 1/233 (0%)
Query: 7 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 66
+P TF ++ G C + D+ +++FR + K G V VTY+IL++G C++G+++ A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 67 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 126
+ +E+ G P+ +TY ++ N K + LEI +++ Y T+I
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 127 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 186
K G++++A + + GV+ ++++Y +I+ CK+G L A +LL +ME+ G +
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 187 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
T+ LI + G++ + +E M GF ++ + ++D L G++D +
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELDKS 596
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 157/321 (48%), Gaps = 18/321 (5%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T TFN ++ GL A+ + + ++G P++VTYN ++ G+C++G A +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L+++ + + TY+TI+ R+ + + M+ KG Y +++ K
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
G+ + ++ MV+ + +++++N L++++ KEGKL+ A L EM +G + T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 188 HTILIDGLCKAGNIKGARLHLEYM--NK-----IGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ L+DG C + A L+ M NK + F S ++ Y C+V R +D +
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY-CMVKR------VDDGM 388
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
VF ++ V ++ TYS +V C++ ++ A +L + GV ++DGL
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 297 RHSGCRREAKKIQSKIRMAKI 317
+G +A +I ++ +K+
Sbjct: 449 CDNGKLEKALEIFEDLQKSKM 469
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 129/271 (47%), Gaps = 4/271 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P F+ + + + + + L + L+ +G + T NI+I C+ + A +
Sbjct: 86 PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 145
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ G+ P+ T+ T++K F K + ++ M G D Y +++ +
Sbjct: 146 LGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
G A D + +M V+ D+ +Y+T+I+ C++G ++AA L EME +G + T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ L+ GLCKAG L L+ M N+ +N ++D K+GK+ A +++ M
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 248 VK----DSFTYSSMVHNLCKAKRLPSASKLL 274
+ + TY++++ C RL A+ +L
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 130/273 (47%), Gaps = 4/273 (1%)
Query: 27 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 86
D+A+ +F+ + + +P LV ++ + + + K+L +G A N T +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 87 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 146
+ C R K +L + + GY D + T+I G++ EA +++MV +G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 147 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 206
Q D+V+YN+++N C+ G A LL +ME++ + D +T++ +ID LC+ G I A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 207 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLC 262
+ M G S++ YN +V L K GK + + + M V + T++ ++
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 263 KAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 295
K +L A++L + G+ ++DG
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDG 342
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 3 CGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLR 62
C + P T+ +M++GLCK A + R +++ G P TYN LI+ + G L
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 63 TARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILS 104
+ +++E+ G + +A + ++ K L++LS
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDMLS 602
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 159/319 (49%), Gaps = 13/319 (4%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L+P TF +++G CK + A+ +++ +++ +VTY LI G CK G ++ A
Sbjct: 194 LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAE 253
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ + + PN++ YTTI+ F+ ++ L+ M +G D Y +I+
Sbjct: 254 EMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGL 313
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
G+LKEAT+ +E M + D+V + T++N Y K G+++AA + ++ ++GFE D
Sbjct: 314 CGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDV 373
Query: 186 YTHTILIDGLCKAGNIKGARLH--LEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 243
+ +IDG+ K G + A ++ +E N + Y ++D L K+G +F
Sbjct: 374 VALSTMIDGIAKNGQLHEAIVYFCIEKANDV-------MYTVLIDALCKEGDFIEVERLF 426
Query: 244 ----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 299
E+ V D F Y+S + LCK L A KL ++ G+ + A ++ GL
Sbjct: 427 SKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASK 486
Query: 300 GCRREAKKIQSKIRMAKIS 318
G EA+++ ++ + IS
Sbjct: 487 GLMVEARQVFDEMLNSGIS 505
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 154/340 (45%), Gaps = 41/340 (12%)
Query: 7 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 66
TP ++FN +++ +CK A + + + G P++++YN LI G C+ G +R+A
Sbjct: 53 TPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 67 ILKELGDSGH-------------------------------------APNAITYTTIMKC 89
+L+ L S +PN +TY+T +
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDT 172
Query: 90 CFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLD 149
++ + +L L+ +MKR + + + +I + K G L+ A ++M + L+
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 150 IVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLE 209
+V+Y LI+ +CK+G+++ A + M + E + +T +IDG + G+ A L
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLA 292
Query: 210 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAK 265
M G ++ AY I+ L +GK+ A + E ME V D +++M++ K+
Sbjct: 293 KMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSG 352
Query: 266 RLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
R+ +A + ++ G A ++DG+ +G EA
Sbjct: 353 RMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 11/287 (3%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ + P + + +++G + +DNA++ + G ++ Y ++I GLC G+
Sbjct: 259 MVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGK 318
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
L+ A I++++ S P+ + +TT+M F++ + K + + + +G+ D T
Sbjct: 319 LKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 121 VIAAFVKIGRLKEATDYM-EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 179
+I K G+L EA Y + D V Y LI+ CKEG L ++ +
Sbjct: 379 MIDGIAKNGQLHEAIVYFCIEKAND------VMYTVLIDALCKEGDFIEVERLFSKISEA 432
Query: 180 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
G DK+ +T I GLCK GN+ A M + G +L AY ++ L G + A
Sbjct: 433 GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 240 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
VF+ M DS + ++ K + +AS LLL + G+
Sbjct: 493 RQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 10/288 (3%)
Query: 29 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 88
+L+ L G+ P ++N ++ +CK G+++ A I+ + G P+ I+Y +++
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 89 CCFRN---RKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 145
RN R L LE L A D + ++ F K+ L E YM M+
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-C 158
Query: 146 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGAR 205
++V+Y+T I+ +CK G+L+ A M++ + T T LIDG CKAG+++ A
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 206 LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD-----SFTYSSMVHN 260
+ M ++ N+ Y ++D K G++ A ++ M V+D S Y++++
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM-VEDRVEPNSLVYTTIIDG 277
Query: 261 LCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
+ +A K L L G+R+ +A ++ GL +G +EA +I
Sbjct: 278 FFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 5/222 (2%)
Query: 4 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
DL P F M+N K+ A+ M+ L + GF P++V + +I G+ K G+L
Sbjct: 332 SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHE 391
Query: 64 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 123
A N + YT ++ + + + S + G D F Y + IA
Sbjct: 392 AIVYF-----CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIA 446
Query: 124 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 183
K G L +A +MV +G+ LD+++Y TLI +G + A + DEM G
Sbjct: 447 GLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISP 506
Query: 184 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNC 225
D +LI K GN+ A L M + G + + +C
Sbjct: 507 DSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 125/293 (42%), Gaps = 41/293 (13%)
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+R A L L S + P+ T + + L L+ L+ + +GYT + +
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME-KQ 179
V++ K+G++K A D + M G + D++SYN+LI+ +C+ G + +A L+L+ +
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 180 GFEC------------------------------------DKYTHTILIDGLCKAGNIKG 203
GF C + T++ ID CK+G ++
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 204 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-EVKDSF---TYSSMVH 259
A M + N+ + C++D K G ++ A+++++ M V+ S TY++++
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 260 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
CK + A ++ ++ V ++DG G A K +K+
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 144/317 (45%), Gaps = 42/317 (13%)
Query: 7 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 66
+P +N++++GLCK ++ + G VP VTYN LI GLC G+L A
Sbjct: 254 SPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVS 313
Query: 67 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 126
+L+ + S PN +TY T++ + R+ + +LS+M+ +GY + Y +I+
Sbjct: 314 LLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLF 373
Query: 127 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKL-------------------- 166
K G+ +EA +M G + +IV Y+ L++ C+EGK
Sbjct: 374 KEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAY 433
Query: 167 ---------------EAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYM 211
E A + EM+K G +K+ +++LIDGLC G +K A + M
Sbjct: 434 TYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Query: 212 NKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM-------EVKDSFTYSSMVHNLCKA 264
IG + AY+ I+ L G +D A+ ++ M D TY+ ++ LC
Sbjct: 494 LTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQ 553
Query: 265 KRLPSASKLLLSCLKSG 281
K + A LL S L G
Sbjct: 554 KDISRAVDLLNSMLDRG 570
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 157/312 (50%), Gaps = 4/312 (1%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 64
+++P +FN+++ LCK R+ D A+ +FRG+ + +P+ TY L+ GLCK R+ A
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 65 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 124
+L E+ G +P+ + Y ++ + +++ M KG + Y T+I
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 125 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
G+L +A +E+MV+ + V+Y TLIN K+ + A LL ME++G+ +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
++ +++LI GL K G + A M + G N+ Y+ +VD L ++GK + A +
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 245 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
M + +++TYSS++ K A ++ K+G K ++DGL G
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 301 CRREAKKIQSKI 312
+EA + SK+
Sbjct: 482 RVKEAMMVWSKM 493
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 148/333 (44%), Gaps = 63/333 (18%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGF------------------- 41
M+ P T+ ++NGL K R +A+R+ +++ G+
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 42 ----------------VPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTT 85
P +V Y++L+ GLC+ G+ A+ IL + SG PNA TY++
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 86 IMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDG 145
+MK F+ + +++ M + G + + F Y +I +GR+KEA +M+T G
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 146 VQLDIVSYNTLINLYCKEGKLEAAYLLLDEM---EKQGFECDKYTHTILIDGLCKAGNIK 202
++ D V+Y+++I C G ++AA L EM E+ + D T+ IL+DGLC +I
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDIS 557
Query: 203 GARLHLEYMNKIGFDSNLEAYNC---------------------IVDRLGKDGKIDHAIN 241
A L M G D ++ N +V RL K ++ A
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACT 617
Query: 242 VFESMEVK----DSFTYSSMVHNLCKAKRLPSA 270
+ E M K + T++ +V +CK K++ +A
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 14/293 (4%)
Query: 34 RGLQKHGFV----------PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITY 83
RGL+ + +V P +++N++IK LCK + A + + + + P+ TY
Sbjct: 166 RGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTY 225
Query: 84 TTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVT 143
T+M + + + +L M+ +G + Y +I K G L T ++ M
Sbjct: 226 CTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL 285
Query: 144 DGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKG 203
G + V+YNTLI+ C +GKL+ A LL+ M + T+ LI+GL K
Sbjct: 286 KGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 204 ARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVH 259
A L M + G+ N Y+ ++ L K+GK + A++++ M K + YS +V
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 260 NLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
LC+ + A ++L + SG +++ G +G EA ++ ++
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 149/287 (51%), Gaps = 6/287 (2%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ D++P TFNI+++G K+ ++++F+ + P +++YN LI GLC G+
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A + ++ +G PN ITY ++ +N K L++ ++K +G Y
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I A+ K+G++ + E+M +G+ D+ +YN LI C+ G +EAA L D++ +G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
D T IL++G C+ G + A + L+ M+K+G YN ++ K+G + A
Sbjct: 467 LP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 241 NVFESMEVK-----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
N+ ME + + +Y+ ++ + +L A+ LL L+ G+
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 154/319 (48%), Gaps = 6/319 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK--- 57
MI + P TFN+++N LCK + A + ++ +G P +V+YN LI G CK
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 58 AGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFG 117
G++ A +LKE+ ++ +PN T+ ++ +++ +++ M + +
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 118 YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEME 177
Y ++I G++ EA ++MV+ GVQ ++++YN LIN +CK L+ A + ++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 178 KQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID 237
QG + +LID CK G I E M + G ++ YNC++ L ++G I+
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 238 HAINVFESMEVK---DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVD 294
A +F+ + K D T+ ++ C+ A+ LL K G++ V+
Sbjct: 454 AAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMK 513
Query: 295 GLRHSGCRREAKKIQSKIR 313
G G + A +++++
Sbjct: 514 GYCKEGNLKAATNMRTQME 532
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 130/268 (48%), Gaps = 10/268 (3%)
Query: 15 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 74
+M+ L +NR D +++ + + P + T+N++I LCK G++ AR +++++
Sbjct: 194 LMIALLKENRSAD-VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252
Query: 75 GHAPNAITYTTIM----KCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 130
G +PN ++Y T++ K + YK +L M + + + +I F K
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKAD-AVLKEMVENDVSPNLTTFNILIDGFWKDDN 311
Query: 131 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 190
L + ++M+ V+ +++SYN+LIN C GK+ A + D+M G + + T+
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 191 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 247
LI+G CK +K A + G YN ++D K GKID + E ME
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 248 -VKDSFTYSSMVHNLCKAKRLPSASKLL 274
V D TY+ ++ LC+ + +A KL
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLF 459
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 2/203 (0%)
Query: 7 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 66
P T +N++++ CK D+ + +++ G VP++ TYN LI GLC+ G + A+
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 67 ILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 126
+ +L G P+ +T+ +M+ R + + +L M + G Y V+ +
Sbjct: 458 LFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC 516
Query: 127 KIGRLKEATDYMEQMVTDG-VQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K G LK AT+ QM + +++++ SYN L+ Y ++GKLE A +LL+EM ++G ++
Sbjct: 517 KEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNR 576
Query: 186 YTHTILIDGLCKAGNIKGARLHL 208
T+ I+ + + G + HL
Sbjct: 577 ITYEIVKEEMVDQGFVPDIEGHL 599
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 120/265 (45%), Gaps = 7/265 (2%)
Query: 51 LIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 110
L+ L K R ++ KE+ PN T+ ++ + K +++ MK G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 111 YTFDGFGYCTVIAAFVKI---GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLE 167
+ + Y T+I + K+ G++ +A +++MV + V ++ ++N LI+ + K+ L
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 168 AAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIV 227
+ + EM Q + + ++ LI+GLC G I A + M G NL YN ++
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 228 DRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVR 283
+ K+ + A+++F S++ V + Y+ ++ CK ++ L + G+
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 284 ILKSAQKAVVDGLRHSGCRREAKKI 308
++ GL +G AKK+
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKL 458
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 79 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 138
N+I ++ N +++LG E GY ++ A +K R +
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 139 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK- 197
++M+ +Q ++ ++N +IN CK GK+ A ++++M+ G + ++ LIDG CK
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 198 --AGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD----S 251
G + A L+ M + NL +N ++D KD + ++ VF+ M +D
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 252 FTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREA 305
+Y+S+++ LC ++ A + + +GV+ A+++G + +EA
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 7/180 (3%)
Query: 145 GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA 204
G +L +S L+ KE + + EM ++ + + +T ++I+ LCK G + A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 205 RLHLEYMNKIGFDSNLEAYNCIVD---RLGKDGKIDHAINVFESMEVKDS----FTYSSM 257
R +E M G N+ +YN ++D +LG +GK+ A V + M D T++ +
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 258 VHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 317
+ K LP + K+ L V+ + ++++GL + G EA ++ K+ A +
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 154/320 (48%), Gaps = 10/320 (3%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ L P T+N +++G CK + + ++ ++ P L+T+N L+KGL KAG
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A +LKE+ D G P+A T++ + N K + L + G + +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ A K G++++A + + + + G+ + V YNT+I+ YC++G L A + ++ MEKQG
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ D + LI C+ G ++ A + M G ++E YN ++ G+ + D
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
++ + ME + + +Y ++++ LCK +L A + GV ++DG
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 297 RHSGCRREAKKIQSKIRMAK 316
G KI+ R +K
Sbjct: 540 CSKG------KIEDAFRFSK 553
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 127/242 (52%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P +N++++GLCK + ++A ++F + +P L+TYN LI G CKAG + +
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ + P+ IT+ T++K F+ + +L MK G+ D F + + +
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+ + A E V GV+++ + + L+N CKEGK+E A +L +G ++
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
+ +IDG C+ G++ GAR+ +E M K G + AYNC++ R + G++++A M+
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 248 VK 249
+K
Sbjct: 452 LK 453
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 3/272 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P +N M++G C+ A ++K G P+ + YN LI+ C+ G + A
Sbjct: 385 LVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ ++ G +P+ TY ++ R ++ +IL M+ G + Y T+I
Sbjct: 445 KEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCL 504
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K +L EA M GV + YN LI+ C +GK+E A+ EM K+G E +
Sbjct: 505 CKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNL 564
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T+ LIDGL G + A L +++ G ++ YN ++ G G + I ++E
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 246 ME---VKDSFTYSSMVHNLCKAKRLPSASKLL 274
M+ +K + ++ +LC + + +L
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEGIELTERLF 656
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 132/299 (44%), Gaps = 4/299 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
P TF+I+ +G N + AL ++ G T +IL+ LCK G++ A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
IL G PN + Y T++ R + AM+++G D Y +I F
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
++G ++ A + +M GV + +YN LI Y ++ + + + +L EME G +
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
++ LI+ LCK + A++ M G + YN ++D GKI+ A +
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 246 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
M K + TY++++ L +L A LLL + G++ +++ G +G
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG 613
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 133/287 (46%), Gaps = 7/287 (2%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
+++LN +++ A +F L+ G P + +L+ L K + R + +
Sbjct: 115 LSVLLN---ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL 171
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLK 132
+S P+ Y ++ + GLE+ + MK F Y +I K R+
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 133 EATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILI 192
+A ++M+ + +++YNTLI+ YCK G E ++ + + M+ E T L+
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM---EVK 249
GL KAG ++ A L+ M +GF + ++ + D + K + A+ V+E+ VK
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVK 351
Query: 250 -DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 295
+++T S +++ LCK ++ A ++L + G+ + ++DG
Sbjct: 352 MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG 398
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 31/242 (12%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
++P +N++++G C ++A R + + K G LVTYN LI GL G+L A
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGY-------------- 111
+L E+ G P+ TY +++ + + + MKR G
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLC 644
Query: 112 TFDG-------FG----------YCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYN 154
T +G FG Y V+ + G +++A + +QM+ + LD +YN
Sbjct: 645 TKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Query: 155 TLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKI 214
+LI K GKL L+DEM + E + T+ I++ G C+ + A + M +
Sbjct: 705 SLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEK 764
Query: 215 GF 216
GF
Sbjct: 765 GF 766
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 4/207 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P T+N +++G + ++ +++ G P L TY++LI K G T R
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTER 654
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
G+ P+ + Y ++ C + + + M K D Y ++I
Sbjct: 655 L----FGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+K+G+L E +++M ++ + +YN ++ +C+ +AY+ EM+++GF D
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMN 212
L+ GL + K A + + MN
Sbjct: 771 CIGNELVSGLKEEWRSKEAEIVISEMN 797
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 64
++ P T+NI++ G C+ + +A +R +Q+ GF+ ++ N L+ GL + R + A
Sbjct: 730 EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
Query: 65 RWILKEL 71
++ E+
Sbjct: 790 EIVISEM 796
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 153/317 (48%), Gaps = 4/317 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ P +N +++GLCKN + AL + ++K G ++VTYN L+ GLC +GR
Sbjct: 167 MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGR 226
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
A +L+++ P+ +T+T ++ + E+ M + + Y +
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNS 286
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I GRL +A + M + G ++V+YNTLI+ +CK ++ L M +G
Sbjct: 287 IINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG 346
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
F D +T+ LI G C+ G ++ A +M ++ + ++ L +G+I+ A+
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 241 NVFESMEVKDSF----TYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
F+ M + + Y+ M+H LCKA ++ A +L GV+ ++ GL
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 297 RHSGCRREAKKIQSKIR 313
+G RREA ++ +++
Sbjct: 467 CKNGPRREADELIRRMK 483
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 133/263 (50%), Gaps = 4/263 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
+F I+++ C+ AL + + K G+ P +VT+ L+ G C R+ A ++ +
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
SG+ PN + Y T++ +N + + LE+L+ M++KG D Y T++ GR
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
+A + M+ + D+V++ LI+++ K+G L+ A L EM + + + T+ +
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
I+GLC G + A+ + M G N+ YN ++ K +D + +F+ M +
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 250 --DSFTYSSMVHNLCKAKRLPSA 270
D FTY++++H C+ +L A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVA 370
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 143/300 (47%), Gaps = 8/300 (2%)
Query: 10 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 69
T+N +L GLC + +A RM R + K P++VT+ LI K G L A+ + K
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYK 270
Query: 70 ELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKI 128
E+ S PN +TY +I+ C R Y + M KG + Y T+I+ F K
Sbjct: 271 EMIQSSVDPNNVTYNSIINGLCMHGRLYD-AKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 129 GRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTH 188
+ E ++M +G DI +YNTLI+ YC+ GKL A + M + D TH
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 189 TILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV 248
IL+ GLC G I+ A + + M + + AYN ++ L K K++ A +F + V
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV 449
Query: 249 K----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 304
+ D+ TY+ M+ LCK A +L+ + G+ +A+ ++ HS +E
Sbjct: 450 EGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLE--EHSSSNKE 507
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 4/250 (1%)
Query: 27 DNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTI 86
++A +F + +P +V + L+ R T + +++ G + + ++T +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 87 MKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGV 146
+ C R + L +L M + GY + +++ F + R+ +A + MV G
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGY 172
Query: 147 QLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARL 206
+ ++V YNTLI+ CK G+L A LL+EMEK+G D T+ L+ GLC +G A
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 207 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLC 262
L M K + ++ + ++D K G +D A +++ M ++ TY+S+++ LC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 263 KAKRLPSASK 272
RL A K
Sbjct: 293 MHGRLYDAKK 302
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI + P T+N ++NGLC + +A + F + G P +VTYN LI G CK
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ + + + G + TY T++ + K ++ L+I M + T D +C
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ G ++ A + M + IV+YN +I+ CK K+E A+ L + +G
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA 222
+ D T+TI+I GLCK G + A + M + G + A
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 4/258 (1%)
Query: 54 GLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 113
G + R A + E+ S P+ + +T ++ R+Y+ + M+ G +
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 114 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 173
D + + +I F + RL A + +M+ G + IV++ +L++ +C ++ A+ L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 174 DEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKD 233
M K G+E + + LIDGLCK G + A L M K G +++ YN ++ L
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 234 GKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 289
G+ A + M + D T+++++ K L A +L ++S V
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 290 KAVVDGLRHSGCRREAKK 307
++++GL G +AKK
Sbjct: 285 NSIINGLCMHGRLYDAKK 302
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 20/316 (6%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI P T+T++ +LN LC + A +F +++ G V ++ TY I++ CKAG
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ AR E+ + G PN +TYT ++ + +K E+ M +G + Y
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 121 VIAAFVKIGRLKEATDYMEQM-----VTD-----------GVQLDIVSYNTLINLYCKEG 164
+I K G++++A E+M V D + ++V+Y L++ +CK
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 165 KLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYN 224
++E A LLD M +G E ++ + LIDGLCK G + A+ M++ GF + L Y+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 225 CIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKS 280
++DR K + D A V M + Y+ M+ LCK + A KL+ +
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 281 GVRILKSAQKAVVDGL 296
G + A++DG
Sbjct: 774 GCQPNVVTYTAMIDGF 789
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 20/310 (6%)
Query: 7 TPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARW 66
TP T+ +++ K + A +F + G +P +VTY+ LI G CKAG++ A
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 67 IL----------------KELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKG 110
I K+ D+ PN +TY ++ ++ + + ++L AM +G
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 111 YTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAY 170
+ Y +I K+G+L EA + +M G + +Y++LI+ Y K + + A
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 171 LLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRL 230
+L +M + + +T +IDGLCK G A ++ M + G N+ Y ++D
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 231 GKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILK 286
G GKI+ + + E M K + TY ++ + CK L A LL ++
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 287 SAQKAVVDGL 296
+ + V++G
Sbjct: 850 AGYRKVIEGF 859
Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 10/277 (3%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T++ +L G + R+ + G P +N L+ C +G A +
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRK------YKLGLEILSAMKRKGYTFDGFGYCTV 121
LK++ GH P + Y ++ ++ L + S M G + +
Sbjct: 395 LKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454
Query: 122 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 181
G+ ++A + +M+ G D +Y+ ++N C K+E A+LL +EM++ G
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGL 514
Query: 182 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 241
D YT+TI++D CKAG I+ AR M ++G N+ Y ++ K K+ +A
Sbjct: 515 VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 242 VFESME----VKDSFTYSSMVHNLCKAKRLPSASKLL 274
+FE+M + + TYS+++ CKA ++ A ++
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 157/321 (48%), Gaps = 19/321 (5%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P ++ +++GLCK D A + + +HGF L TY+ LI K R A +
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
L ++ ++ APN + YT ++ + K +++ M+ KG + Y +I F
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
IG+++ + +E+M + GV + V+Y LI+ CK G L+ A+ LL+EM++ +
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSN---LEAYNCIVDRLGKDGKIDHAINVFE 244
+ +I+G K I+ L +++IG D L Y ++D L K +++ A+ + E
Sbjct: 852 YRKVIEGFNKEF-IES----LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLE 906
Query: 245 SME------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRH 298
+ V S TY+S++ +LC A ++ +A +L K GV + +++ GL
Sbjct: 907 EVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL-- 964
Query: 299 SGCRREAKKIQSKIRMAKISH 319
R +K ++ + + ISH
Sbjct: 965 ---FRNSKISEALLLLDFISH 982
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 22/316 (6%)
Query: 3 CGDLTPCTATFNIMLNGLCKNRYT------DNALRMFRGLQKHGFVPELVTYNILIKGLC 56
CG + P +NI++ +C ++ + D A + + + G V + + + LC
Sbjct: 401 CGHM-PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC 459
Query: 57 KAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGF 116
AG+ A +++E+ G P+ TY+ ++ K +L + MKR G D +
Sbjct: 460 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVY 519
Query: 117 GYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM 176
Y ++ +F K G +++A + +M G ++V+Y LI+ Y K K+ A L + M
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 177 EKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKI 236
+G + T++ LIDG CKAG ++ A E M +++ Y D
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD-------- 631
Query: 237 DHAINVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
++ E + TY +++ CK+ R+ A KLL + G + A++DGL
Sbjct: 632 -------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGL 684
Query: 297 RHSGCRREAKKIQSKI 312
G EA+++++++
Sbjct: 685 CKVGKLDEAQEVKTEM 700
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 4/242 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ P + M++GLCK TD A ++ + +++ G P +VTY +I G G+
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ T +L+ +G G APN +TY ++ C +N + +L MK+ + GY
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
VI F K E+ ++++ D + Y LI+ K +LE A LL+E+
Sbjct: 855 VIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912
Query: 181 FECDKYTHTI--LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDH 238
Y+ T LI+ LC A ++ A M K G ++++ ++ L ++ KI
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Query: 239 AI 240
A+
Sbjct: 973 AL 974
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 144/339 (42%), Gaps = 48/339 (14%)
Query: 19 GLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAP 78
LCK AL + ++ FVP+ V Y LI GLC+A A L + + P
Sbjct: 279 SLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 79 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKG-----YTFDGF--GYCT---------VI 122
N +TY+T++ C ++ +L+ M +G F+ YCT ++
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 123 AAFVKIGRLKEATDY-------------------------MEQMVTDGVQLDIVSYNTLI 157
VK G + Y +M+ GV L+ ++ ++
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 158 NLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFD 217
C GK E A+ ++ EM QGF D T++ +++ LC A ++ A L E M + G
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515
Query: 218 SNLEAYNCIVDRLGKDGKIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 273
+++ Y +VD K G I+ A F M + TY++++H KAK++ A++L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575
Query: 274 LLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKI 312
+ L G A++DG +G +A +I ++
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 124/342 (36%), Gaps = 87/342 (25%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELG 72
N+++ C+N AL L+ F P TYN LI+ KA RL +A I +E+
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 73 DSGHAPNAITYTTIMKCCFRNRKYKLG--LEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 130
+ + T CF K+G E L+ ++ + + D Y +I+ +
Sbjct: 263 LANLRMDGFTLR-----CFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASL 317
Query: 131 LKEATDYMEQMVTDGVQLDIVSY-----------------------------------NT 155
+EA D++ +M ++V+Y N+
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377
Query: 156 LINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG--------------------- 194
L++ YC G AY LL +M K G + ILI
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYS 437
Query: 195 --------------------LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 234
LC AG + A + M GF + Y+ +++ L
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 235 KIDHAINVFESME----VKDSFTYSSMVHNLCKAKRLPSASK 272
K++ A +FE M+ V D +TY+ MV + CKA + A K
Sbjct: 498 KMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELV----TYNILIKGLCKAGR 60
D P + + ++++ L K + + ALR+ + F LV TYN LI+ LC A +
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSATLVDYSSTYNSLIESLCLANK 934
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEIL 103
+ TA + E+ G P ++ +++K FRN K L +L
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 139/278 (50%), Gaps = 4/278 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+P + +++G CK + A +F + K G V TY +LI GL K G +
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGF 253
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ +++ + G PN TY +M ++ + K ++ M+ +G + + Y T+I
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+ +L EA ++QM +DG+ ++++YNTLI+ +C GKL A L +++ +G
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T+ IL+ G C+ G+ GA ++ M + G + Y ++D + ++ AI + S
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 246 ME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLK 279
ME V D TYS ++H C ++ AS+L S ++
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 156/321 (48%), Gaps = 7/321 (2%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ P + FN +L + + + N F K V ++ ++ ILIKG C+AG
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSS-SFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGE 178
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ + +L EL + G +PN + YTT++ C + + + ++ M + G + Y
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I K G K+ + E+M DGV ++ +YN ++N CK+G+ + A+ + DEM ++G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
C+ T+ LI GLC+ + A ++ M G + NL YN ++D GK+ A+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 241 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
++ ++ + TY+ +V C+ A+K++ + G++ K ++D
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 297 RHSGCRREAKKIQSKIRMAKI 317
S +A IQ ++ M ++
Sbjct: 419 ARSDNMEKA--IQLRLSMEEL 437
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 148/311 (47%), Gaps = 41/311 (13%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T+ +++NGL KN M+ +Q+ G P L TYN ++ LCK GR + A + E+
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ G + N +TY T++ R K +++ MK G + Y T+I F +G+L
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
+A + + G+ +V+YN L++ +C++G A ++ EME++G + K T+TIL
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 192 IDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKD 250
ID ++ N++ A +L L M ++G ++ Y+ ++ G+++ A +F+SM K+
Sbjct: 415 IDTFARSDNMEKAIQLRLS-MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 251 --------------------SF-------------------TYSSMVHNLCKAKRLPSAS 271
S+ +Y M+ LCK ++ A
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 272 KLLLSCLKSGV 282
+L+ + SG+
Sbjct: 534 RLVEKMIDSGI 544
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P T+N +++G C AL + R L+ G P LVTYNIL+ G C+ G A
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
++KE+ + G P+ +TYT ++ R+ + +++ +M+ G D Y +I F
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
G++ EA+ + MV + + V YNT+I YCKEG A LL EME++ +
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNV 513
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSN 219
++ +I+ LCK K A +E M G D +
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 46/88 (52%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ + P +N M+ G CK + AL++ + +++ P + +Y +I+ LCK +
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMK 88
+ A +++++ DSG P+ + I +
Sbjct: 529 SKEAERLVEKMIDSGIDPSTSILSLISR 556
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Query: 14 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 73
NI+L GLC+N A+ + R ++++ +P++ +YN +I+G C+ L A + E+
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 74 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 133
SG + + +T+ ++ + K + L MK G D Y ++I F G L
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 134 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 193
++++ G ++YNTLI +CK G+L+ A + + M ++G + YT+T LID
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 194 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 249
GLC G K A L M + + N YN I+++L KDG + A+ + E M+ +
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 250 DSFTYSSMVHNLCKAKRLPSASKLLLSCLK 279
D+ TY+ ++ LC L ASKLL LK
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLK 415
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 147/292 (50%), Gaps = 17/292 (5%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P ++N ++ G C+ + + AL + ++ G LVT+ ILI CKAG++ A
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 66 WILKELGDSGHAPNAITYTTIMK----CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTV 121
LKE+ G + + YT++++ C +R L E+L +G + Y T+
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVL----ERGDSPCAITYNTL 288
Query: 122 IAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGF 181
I F K+G+LKEA++ E M+ GV+ ++ +Y LI+ C GK + A LL+ M ++
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 182 ECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAIN 241
E + T+ I+I+ LCK G + A +E M K + YN ++ L G +D A
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 242 VFESMEVKDSFT------YSSMVHNLCKAKRLPSA---SKLLLSCLKSGVRI 284
+ M S+T Y++++H LCK RL A LL+ L +G R+
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRV 460
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 155/313 (49%), Gaps = 6/313 (1%)
Query: 11 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 70
T+ I+++ CK D A+ + ++ G +LV Y LI+G C G L + + E
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDE 272
Query: 71 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 130
+ + G +P AITY T+++ + + K EI M +G + + Y +I +G+
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 131 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 190
KEA + M+ + + V+YN +IN CK+G + A +++ M+K+ D T+ I
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 191 LIDGLCKAGNIKGAR--LHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF----E 244
L+ GLC G++ A L+L + D ++ +YN ++ L K+ ++ A++++ E
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 245 SMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 304
+ D T + ++++ KA + A +L S + A++DG +G
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 305 AKKIQSKIRMAKI 317
AK + K+R++++
Sbjct: 513 AKGLLCKMRVSEL 525
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 144/320 (45%), Gaps = 42/320 (13%)
Query: 4 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
GD +PC T+N ++ G CK A +F + + G P + TY LI GLC G+ +
Sbjct: 277 GD-SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 64 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 123
A +L + + PNA+TY I+ ++ +EI+ MK++ D Y ++
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLG 395
Query: 124 AFVKIGRLKEATDYMEQMVTDG--VQLDIVSYNTLINLYCKEGKLEAAYLLLD------- 174
G L EA+ + M+ D D++SYN LI+ CKE +L A + D
Sbjct: 396 GLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Query: 175 ------------------------EMEKQGFEC----DKYTHTILIDGLCKAGNIKGARL 206
E+ KQ + + T+T +IDG CK G + A+
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 207 HLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVKDSF----TYSSMVHNLC 262
L M ++ YNC++ L K+G +D A +FE M+ ++F +++ M+
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 263 KAKRLPSASKLLLSCLKSGV 282
KA + SA LL+ ++G+
Sbjct: 576 KAGDIKSAESLLVGMSRAGL 595
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 2/241 (0%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFV--PELVTYNILIKGLCKAGRLRTAR 65
P T+NI+L GLC D A ++ + K P++++YN LI GLCK RL A
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
I L + A + +T ++ + +E+ + + Y +I F
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K G L A + +M +Q + YN L++ CKEG L+ A+ L +EM++ D
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDV 564
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
+ I+IDG KAG+IK A L M++ G +L Y+ +++R K G +D AI+ F+
Sbjct: 565 VSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDK 624
Query: 246 M 246
M
Sbjct: 625 M 625
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 14 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 73
N ++ L ++R + A +R + + V+ + L++ + + A +L +
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 74 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 133
G A N + ++K RN + + +L M+R D F Y TVI F + L++
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 134 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 193
A + +M G +V++ LI+ +CK GK++ A L EM+ G E D +T LI
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 194 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 249
G C G + + + + + G YN ++ K G++ A +FE M +
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 250 DSFTYSSMVHNLCKAKRLPSASKLL 274
+ +TY+ ++ LC + A +LL
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLL 340
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 112/243 (46%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P ++N +++GLCK AL ++ L + + VT NIL+ KAG + A +
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
K++ DS N+ TYT ++ + + +L M+ F Y ++++ K
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
G L +A E+M D D+VS+N +I+ K G +++A LL M + G D +T
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME 247
++ LI+ K G + A + M GF+ + + ++ G+ D + + +
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661
Query: 248 VKD 250
KD
Sbjct: 662 DKD 664
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 88/189 (46%)
Query: 10 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 69
+ T+ M++G CK + A + ++ P + YN L+ LCK G L A + +
Sbjct: 494 SDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFE 553
Query: 70 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 129
E+ + P+ +++ ++ + K +L M R G + D F Y +I F+K+G
Sbjct: 554 EMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLG 613
Query: 130 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 189
L EA + ++MV G + D ++++ +G+ + L+ ++ + DK
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTC 673
Query: 190 ILIDGLCKA 198
++D +C +
Sbjct: 674 TVMDYMCNS 682
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M +L P +N +L+ LCK D A R+F +Q+ P++V++NI+I G KAG
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLG-----LEILSAMKRKGYTFDG 115
+++A +L + +G +P+ TY+ ++ NR KLG + M G+ D
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLI-----NRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Query: 116 FGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYC 161
+V+ + G + T+ ++++V + LD T+++ C
Sbjct: 635 HICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 138/277 (49%), Gaps = 7/277 (2%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ + P + +++ LCKN + + AL +F ++ +G P++V Y L+ GLC +GR
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
R A +L+ + P+ IT+ ++ + K+ E+ + M R + F Y +
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I F G + EA M T G D+V+Y +LIN +CK K++ A + EM ++G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ T+T LI G + G A+ +M G N+ YN ++ L +GK+ A+
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 241 NVFESMEVKDS-------FTYSSMVHNLCKAKRLPSA 270
+FE M+ ++ +TY+ ++H LC +L A
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKA 444
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 131/275 (47%), Gaps = 4/275 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T N+++N C++ A + K GF P++VT+ LI G C R+ A ++ ++
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
+ G P+ + YTTI+ +N L + M+ G D Y +++ GR
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
++A + M ++ D++++N LI+ + KEGK A L +EM + + +T+T L
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
I+G C G + AR M G ++ AY +++ K K+D A+ +F M K
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 250 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
++ TY++++ + + A ++ + GV
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 134/263 (50%), Gaps = 7/263 (2%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P TFN +++ K +A ++ + + P + TY LI G C G + AR
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ + G P+ + YT+++ + +K ++I M +KG T + Y T+I F
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFE 182
++G+ A + MV+ GV +I +YN L++ C GK++ A ++ ++M+K+ G
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 183 CDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 242
+ +T+ +L+ GLC G ++ A + E M K D + Y I+ + K GK+ +A+N+
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 243 FESMEVK----DSFTYSSMVHNL 261
F S+ K + TY++M+ L
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGL 505
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 6/310 (1%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P F +LN + K + D + + LQ G +L T N+L+ C++ + A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 68 LKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFV 126
L ++ G P+ +T+T+++ C NR + + +++ M G D Y T+I +
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEE-AMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 127 KIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKY 186
K G + A +QM G++ D+V Y +L+N C G+ A LL M K+ + D
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 187 THTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM 246
T LID K G A M ++ N+ Y +++ +G +D A +F M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 247 EVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 302
E K D Y+S+++ CK K++ A K+ + G+ ++ G G
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 303 REAKKIQSKI 312
A+++ S +
Sbjct: 369 NVAQEVFSHM 378
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 5/252 (1%)
Query: 15 IMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDS 74
I+ NGL ++ + AL +F + + +P ++ + L+ + K + + L
Sbjct: 43 ILRNGLHSLQFNE-ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 75 GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEA 134
G + + T +M C ++ + L L M + G+ D + ++I F R++EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 135 TDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDG 194
+ QMV G++ D+V Y T+I+ CK G + A L D+ME G D +T L++G
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 195 LCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKD 250
LC +G + A L M K ++ +N ++D K+GK A ++ M +
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 251 SFTYSSMVHNLC 262
FTY+S+++ C
Sbjct: 282 IFTYTSLINGFC 293
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 131/284 (46%), Gaps = 4/284 (1%)
Query: 29 ALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMK 88
AL R L +V Y +++ + + A + + +S P+ I +T ++
Sbjct: 21 ALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLN 80
Query: 89 CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQL 148
+ +K+ + + + ++ G + D + ++ F + + A+ ++ +M+ G +
Sbjct: 81 VIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEP 140
Query: 149 DIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHL 208
DIV++ +LIN +C ++E A ++++M + G + D +T +ID LCK G++ A
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 209 EYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKA 264
+ M G ++ Y +V+ L G+ A ++ M + D T+++++ K
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 265 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
+ A +L ++ + ++++G GC EA+++
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 3/178 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
LT T T+ ++ G + + A +F + G P + TYN+L+ LC G+++ A
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 66 WILKELGD---SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVI 122
I +++ G APN TY ++ N K + L + M+++ Y +I
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467
Query: 123 AAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
K G++K A + + + GV+ ++V+Y T+I+ +EG A++L +M++ G
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 130 bits (328), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 143/308 (46%), Gaps = 9/308 (2%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAG 59
M+ P T +++GLCK +T+ A R+F L + + P + TY +I G CK
Sbjct: 313 MVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED 372
Query: 60 RLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYC 119
+L A + + + G PN TYTT++ + + E+++ M +G+ + + Y
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 432
Query: 120 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 179
I + K R EA + + + + G++ D V+Y LI CK+ + A M K
Sbjct: 433 AAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
Query: 180 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
GFE D + ILI C+ +K + + + +G E Y ++ K+G ID A
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLA 552
Query: 240 INVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 295
+ F +M+ V DSFTY S++ LCK + A KL + + G+ S +
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGL----SPPEVTRVT 608
Query: 296 LRHSGCRR 303
L + C+R
Sbjct: 609 LAYEYCKR 616
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 140/276 (50%), Gaps = 5/276 (1%)
Query: 4 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
G+L ML + + A+ M +Q G P +T N +++ + G +
Sbjct: 141 GNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEY 200
Query: 64 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 123
A + E+ G P++ +Y ++ CFR+ K + L+ M ++G+ D ++
Sbjct: 201 AENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILT 260
Query: 124 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 183
A + G + A Y +M+ G + +++++ +LI+ CK+G ++ A+ +L+EM + G++
Sbjct: 261 ALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKP 320
Query: 184 DKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINV 242
+ YTHT LIDGLCK G + A RL L+ + + N+ Y ++ K+ K++ A +
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 243 FESMEVKDSF----TYSSMVHNLCKAKRLPSASKLL 274
F M+ + F TY+++++ CKA A +L+
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM 416
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 32/221 (14%)
Query: 11 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 70
T+ I++ CK + AL F + K GF ++ NILI C+ +++ + + +
Sbjct: 464 VTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQL 523
Query: 71 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 130
+ G P TYT+++ C + L L+ MKR G D F Y ++I+ K
Sbjct: 524 VVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSM 583
Query: 131 LKEATDYMEQMVTDGV--------------------------------QLDIVSYNTLIN 158
+ EA E M+ G+ +L I + TL+
Sbjct: 584 VDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVR 643
Query: 159 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAG 199
C E K+ A L ++ ++ D+ T ++G
Sbjct: 644 KLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESG 684
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 125 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
F +IGRL EA + M G+ ++ N ++ + + G +E A + DEM +G D
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
++ +++ G + G I+ A L M + GF + I+ L ++G ++ AI F
Sbjct: 217 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 276
Query: 245 SM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
M + ++S++ LCK + A ++L +++G + A++DGL G
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Query: 301 CRREAKKIQSKI 312
+A ++ K+
Sbjct: 337 WTEKAFRLFLKL 348
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P T+ M++ CK D AL+ F +++HG VP+ TY LI GLCK + A
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEAC 588
Query: 66 WILKELGDSGHAPNAITYTTIM-KCCFRN 93
+ + + D G +P +T T+ + C RN
Sbjct: 589 KLYEAMIDRGLSPPEVTRVTLAYEYCKRN 617
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 146/312 (46%), Gaps = 9/312 (2%)
Query: 4 GDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRT 63
G P ++ ++NG K +D A + + G +P++VTYN +I LCKA +
Sbjct: 190 GGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDK 249
Query: 64 ARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 123
A +L + +G P+ +TY +I+ + + K + L M+ G D Y ++
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309
Query: 124 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 183
K GR EA + M G++ +I +Y TL+ Y +G L + LLD M + G
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 369
Query: 184 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 243
D Y +ILI K G + A L M + G + N Y ++ L K G+++ A+ F
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 244 ESM----EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 299
E M + Y+S++H LC + A +L+L L G+ + +++D S
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID----S 485
Query: 300 GCRREAKKIQSK 311
C +E + I+S+
Sbjct: 486 HC-KEGRVIESE 496
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 152/312 (48%), Gaps = 4/312 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ + P F+I++ K D A+ +F +++ G P VTY +I LCK+GR
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A +++ D G +P I Y +++ K++ E++ M +G + + +
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I + K GR+ E+ E MV GV+ ++++YNTLIN YC GK++ A LL M G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA- 239
+ + T++ LI+G CK ++ A + + M G ++ YN I+ L + + A
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 240 ---INVFESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
+ + ES + TY+ ++H LCK K A ++ + +++ ++D L
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 297 RHSGCRREAKKI 308
G EAK +
Sbjct: 662 LKVGRNDEAKDL 673
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 154/309 (49%), Gaps = 4/309 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P T+N ++ LCK + D A+ + + K+G +P+ +TYN ++ G C +G+ + A
Sbjct: 227 ILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAI 286
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
LK++ G P+ +TY+ +M +N + +I +M ++G + Y T++ +
Sbjct: 287 GFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGY 346
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
G L E ++ MV +G+ D ++ LI Y K+GK++ A L+ +M +QG +
Sbjct: 347 ATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNA 406
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
T+ +I LCK+G ++ A L+ E M G YN ++ L K + A +
Sbjct: 407 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 246 MEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 301
M + ++ ++S++ + CK R+ + KL ++ GV+ +++G +G
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK 526
Query: 302 RREAKKIQS 310
EA K+ S
Sbjct: 527 MDEAMKLLS 535
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 148/315 (46%), Gaps = 6/315 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P T++++++ LCKN A ++F + K G PE+ TY L++G G L
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 356
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+L + +G P+ ++ ++ + K + + S M+++G + Y VI
Sbjct: 357 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 416
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K GR+++A Y EQM+ +G+ + YN+LI+ C K E A L+ EM +G +
Sbjct: 417 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 476
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
+ID CK G + + E M +IG N+ YN +++ GK+D A+ +
Sbjct: 477 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 536
Query: 246 MEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 301
M ++ TYS++++ CK R+ A L SGV ++ GL +
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT-- 594
Query: 302 RREAKKIQSKIRMAK 316
RR A + +R+ +
Sbjct: 595 RRTAAAKELYVRITE 609
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 146/333 (43%), Gaps = 47/333 (14%)
Query: 12 TFNIMLNGLCKNRYTDNALRM-FRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 70
F +L GLC ++ T +A+ + R + + G +P + +YNIL+KGLC R + A +L
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 71 LGDS---GHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
+ D G P+ ++YTT++ F+ M +G D Y ++IAA K
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+ +A + + MV +GV D ++YN++++ YC G+ + A L +M G E D T
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVD------------------- 228
+++L+D LCK G AR + M K G + Y ++
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 229 ----------------RLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKRLP 268
K GK+D A+ VF M + ++ TY +++ LCK+ R+
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 269 SASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 301
A + G+ S V + L H C
Sbjct: 424 DAMLYFEQMIDEGL----SPGNIVYNSLIHGLC 452
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 10/287 (3%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 64
++TP T+ I++ C+ D + K GF + + + L+KGLC R A
Sbjct: 82 EVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDA 141
Query: 65 -RWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAM---KRKGYTFDGFGYC 119
+L+ + + G PN +Y ++K C NR + LE+L M + G D Y
Sbjct: 142 MDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQE-ALELLHMMADDRGGGSPPDVVSYT 200
Query: 120 TVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ 179
TVI F K G +A +M+ G+ D+V+YN++I CK ++ A +L+ M K
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKN 260
Query: 180 GFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHA 239
G D T+ ++ G C +G K A L+ M G + ++ Y+ ++D L K+G+ A
Sbjct: 261 GVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEA 320
Query: 240 INVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
+F+SM + + TY +++ L LL +++G+
Sbjct: 321 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 112/249 (44%), Gaps = 8/249 (3%)
Query: 43 PELVTYNILIKGLCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEI 102
P+L TY ILI C+AGRL L + G +AI +T ++K +++ ++I
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 103 -LSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYMEQMVTD---GVQLDIVSYNTLIN 158
L M G + F Y ++ R +EA + + M D G D+VSY T+IN
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 159 LYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDS 218
+ KEG + AY EM +G D T+ +I LCKA + A L M K G
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 219 NLEAYNCIVDRLGKDGKIDHAINVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLL 274
+ YN I+ G+ AI + M D TYS ++ LCK R A K+
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 275 LSCLKSGVR 283
S K G++
Sbjct: 325 DSMTKRGLK 333
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 43/297 (14%)
Query: 10 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 69
T FN +++ CK + ++F + + G P ++TYN LI G C AG++ A +L
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 70 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 129
+ G PN +TY+T++ GYC KI
Sbjct: 536 GMVSVGLKPNTVTYSTLIN----------------------------GYC-------KIS 560
Query: 130 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 189
R+++A ++M + GV DI++YN ++ + + AA L + + G + + T+
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620
Query: 190 ILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEA--YNCIVDRLGKDGKIDHAINVFESME 247
I++ GLCK + L + + N D LEA +N ++D L K G+ D A ++F +
Sbjct: 621 IILHGLCK-NKLTDDALQM-FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFS 678
Query: 248 ----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
V + +TY M N+ L +L LS +G + +V L G
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 735
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 131/295 (44%), Gaps = 20/295 (6%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWI 67
P T+N ++NG C D A+++ G+ G P VTY+ LI G CK R+ A +
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 68 LKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVK 127
KE+ SG +P+ ITY I++ F+ R+ E+ + G + Y ++ K
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Query: 128 IGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+A + + ++L+ ++N +I+ K G+ + A L G + +T
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 188 HTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI-NVFESM 246
+ ++ A NI G L LE ++++ ++E C VD G ++ + + +
Sbjct: 689 YRLM------AENIIGQGL-LEELDQLFL--SMEDNGCTVD----SGMLNFIVRELLQRG 735
Query: 247 EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSG-----VRILKSAQKAVVDGL 296
E+ + TY SM+ + +AS L + L G R L K+ ++ L
Sbjct: 736 EITRAGTYLSMIDEKHFSLEASTAS-LFIDLLSGGKYQEYYRFLPEKYKSFIESL 789
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 8/239 (3%)
Query: 78 PNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY 137
P+ TY ++ CC R + LG L + +KG+ D + ++ R +A D
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 138 MEQMVTD-GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ---GFECDKYTHTILID 193
+ + +T+ G ++ SYN L+ C E + + A LL M G D ++T +I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 194 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVK 249
G K G+ A M G ++ YN I+ L K +D A+ V +M +
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 250 DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKI 308
D TY+S++H C + + A L GV ++D L +G EA+KI
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKI 323
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 45/257 (17%)
Query: 102 ILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDY--MEQMVTDGVQLDIVSYNTLINL 159
+ + R+G +G +A + + Y M + D V D+ +Y LI
Sbjct: 37 VFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGC 96
Query: 160 YCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKAGNIKGA-RLHLEYMNKIGFDS 218
C+ G+L+ + L + K+GF D T L+ GLC A + L M ++G
Sbjct: 97 CCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIP 156
Query: 219 NLEAYNCIV---------------------DRLG-----------------KDGKIDHAI 240
N+ +YN ++ DR G K+G D A
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
+ + M + D TY+S++ LCKA+ + A ++L + +K+GV +++ G
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276
Query: 297 RHSGCRREAKKIQSKIR 313
SG +EA K+R
Sbjct: 277 CSSGQPKEAIGFLKKMR 293
Score = 38.1 bits (87), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 64
DL TFNIM++ L K D A +F +G VP TY ++ + + G L
Sbjct: 646 DLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 705
Query: 65 RWILKELGDSG 75
+ + D+G
Sbjct: 706 DQLFLSMEDNG 716
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 137/307 (44%), Gaps = 8/307 (2%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+C +P A + ++ GL K + AL + + + G P L YN LI LCK +
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
A + +G G PN +TY+ ++ R K L L M G + Y +
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I K G + A +M +M+ ++ +V+Y +L+ YC +GK+ A L EM +G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
YT T L+ GL +AG I+ A M + N YN +++ ++G + A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
+ M V D+++Y ++H LC + S +K+ + L G L + GL
Sbjct: 563 EFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ-ASEAKVFVDGLHKGNCEL---NEICYTGL 618
Query: 297 RHSGCRR 303
H CR
Sbjct: 619 LHGFCRE 625
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 4/277 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI L P T+ ++ G C + ALR++ + G P + T+ L+ GL +AG
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+R A + E+ + PN +TY +++ E L M KG D + Y
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I G+ EA +++ + +L+ + Y L++ +C+EGKLE A + EM ++G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ D + +LIDG K + K L+ M+ G + Y ++D K G A
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 241 NVFESME----VKDSFTYSSMVHNLCKAKRLPSASKL 273
+++ M V + TY+++++ LCKA + A L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVL 739
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 145/307 (47%), Gaps = 6/307 (1%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 64
DL P T+ ++ GLCK + + L M + F P + L++GL K G++ A
Sbjct: 292 DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA 351
Query: 65 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 124
++K + D G +PN Y ++ + RK+ + M + G + Y +I
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 125 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
F + G+L A ++ +MV G++L + YN+LIN +CK G + AA + EM + E
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 185 KYTHTILIDGLCKAGNI-KGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 243
T+T L+ G C G I K RL+ E K G ++ + ++ L + G I A+ +F
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 244 ESM---EVK-DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 299
M VK + TY+ M+ C+ + A + L + G+ + + ++ GL +
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 300 GCRREAK 306
G EAK
Sbjct: 591 GQASEAK 597
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 145/312 (46%), Gaps = 4/312 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ + P + ++ LC+ + A M ++ G +V YN+LI GLCK +
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCT 120
+ A I K+L P+ +TY T++ + +++++GLE++ M ++ +
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
++ K G+++EA + ++++V GV ++ YN LI+ CK K A LL D M K G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 181 FECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAI 240
+ T++ILID C+ G + A L M G ++ YN +++ K G I A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 241 NVFESMEVK----DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGL 296
M K TY+S++ C ++ A +L G+ ++ GL
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 297 RHSGCRREAKKI 308
+G R+A K+
Sbjct: 518 FRAGLIRDAVKL 529
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P T++I+++ C+ D AL + G + YN LI G CK G + A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ E+ + P +TYT++M K L + M KG + + T+++
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+ G +++A +M V+ + V+YN +I YC+EG + A+ L EM ++G D
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
Y++ LI GLC G A++ ++ ++K + N Y ++ ++GK++ A++V +
Sbjct: 578 YSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE 637
Query: 246 M 246
M
Sbjct: 638 M 638
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 134/283 (47%), Gaps = 6/283 (2%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 64
++ P T+N+M+ G C+ A + + + G VP+ +Y LI GLC G+ A
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 65 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAA 124
+ + L N I YT ++ R K + L + M ++G D Y +I
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 125 FVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECD 184
+K K +++M G++ D V Y ++I+ K G + A+ + D M +G +
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKID--HAINV 242
+ T+T +I+GLCKAG + A + M + N Y C +D L K G++D A+ +
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVEL 775
Query: 243 FESM---EVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGV 282
++ + ++ TY+ ++ C+ R+ AS+L+ + GV
Sbjct: 776 HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 125/273 (45%), Gaps = 4/273 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P T + +L+GL K R+ A+ +F + G P++ Y +I+ LC+ L A+
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
++ + +G N + Y ++ + +K + I + K D YCT++
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGL 307
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K+ + + M++M+ + ++L+ K GK+E A L+ + G +
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
+ + LID LCK A L + M KIG N Y+ ++D + GK+D A++
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 246 M---EVKDS-FTYSSMVHNLCKAKRLPSASKLL 274
M +K S + Y+S+++ CK + +A +
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFM 460
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P + M++ K A ++ + G VP VTY +I GLCKAG + A
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKR-----KGYTFDGFGYCT 120
+ ++ PN +TY CF + K +++ A++ KG + Y
Sbjct: 738 VLCSKMQPVSSVPNQVTYG-----CFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 121 VIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQG 180
+I F + GR++EA++ + +M+ DGV D ++Y T+IN C+ ++ A L + M ++G
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 181 FECDKYTHTILIDGLCKAGNIKGA 204
D+ + LI G C AG + A
Sbjct: 853 IRPDRVAYNTLIHGCCVAGEMGKA 876
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 130/316 (41%), Gaps = 39/316 (12%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P T ++ +++GLC A GL K + Y L+ G C+ G+L A
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ +E+ G + + Y ++ +++ KL +L M +G D Y ++I A
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK------- 178
K G KEA + M+ +G + V+Y +IN CK G + A +L +M+
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ 752
Query: 179 ----------------------------QGFECDKYTHTILIDGLCKAGNIKGARLHLEY 210
+G + T+ +LI G C+ G I+ A +
Sbjct: 753 VTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 211 MNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK----DSFTYSSMVHNLCKAKR 266
M G + Y +++ L + + AI ++ SM K D Y++++H C A
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE 872
Query: 267 LPSASKLLLSCLKSGV 282
+ A++L L+ G+
Sbjct: 873 MGKATELRNEMLRQGL 888
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 132/288 (45%), Gaps = 5/288 (1%)
Query: 13 FNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
F++++ ++R + + +F+ + K +PE+ T + L+ GL K A + ++
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
G P+ YT +++ + E+++ M+ G + Y +I K ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
EA + + ++ D+V+Y TL+ CK + E ++DEM F + + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEV--- 248
++GL K G I+ A ++ + G NL YN ++D L K K A +F+ M
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 249 -KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDG 295
+ TYS ++ C+ +L +A L + +G+++ ++++G
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTY----NILIKG-- 54
MI P T+ ++NGLCK + + A + +Q VP VTY +IL KG
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767
Query: 55 -LCKAGRLRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTF 113
+ KA L A ILK G N TY +++ R + + E+++ M G +
Sbjct: 768 DMQKAVELHNA--ILK-----GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 114 DGFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 173
D Y T+I + +K+A + M G++ D V+YNTLI+ C G++ A L
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880
Query: 174 DEMEKQGF 181
+EM +QG
Sbjct: 881 NEMLRQGL 888
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
MI ++P T+ M+N LC+ A+ ++ + + G P+ V YN LI G C AG
Sbjct: 813 MIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGE 872
Query: 61 LRTARWILKELGDSGHAPNAITYTT 85
+ A + E+ G PN T T
Sbjct: 873 MGKATELRNEMLRQGLIPNNKTSRT 897
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 146/311 (46%), Gaps = 4/311 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+P T+N ++NGLCK+ + A +F + + G P+ TY L+ CK G +
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ ++ P+ + ++++M R+ L +++K G D Y +I +
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
+ G + A + +M+ G +D+V+YNT+++ CK L A L +EM ++ D
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
YT TILIDG CK GN++ A + M + ++ YN ++D GK G ID A ++
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 246 MEVKD----SFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGC 301
M K+ +YS +V+ LC L A ++ + ++ +++ G SG
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 302 RREAKKIQSKI 312
+ + K+
Sbjct: 601 ASDGESFLEKM 611
Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 143/313 (45%), Gaps = 6/313 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
L P + I++ G C+ A+ + + + G ++VTYN ++ GLCK L A
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
+ E+ + P++ T T ++ + + +E+ MK K D Y T++ F
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDK 185
K+G + A + MV+ + +SY+ L+N C +G L A+ + DEM + +
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 186 YTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFES 245
+I G C++GN LE M GF + +YN ++ ++ + A + +
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 246 ME------VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 299
ME V D FTY+S++H C+ ++ A +L ++ GV +S +++G
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Query: 300 GCRREAKKIQSKI 312
EA +I ++
Sbjct: 706 DNLTEAFRIHDEM 718
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 142/305 (46%), Gaps = 4/305 (1%)
Query: 12 TFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKEL 71
T NIM+N LCK+ + +Q+ G P++VTYN LI G + A ++ +
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 72 GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRL 131
G +P TY T++ ++ KY+ E+ + M R G + D Y +++ K G +
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDV 356
Query: 132 KEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTIL 191
E M + V D+V ++++++L+ + G L+ A + + +++ G D +TIL
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 192 IDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK-- 249
I G C+ G I A M + G ++ YN I+ L K + A +F M +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 250 --DSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKK 307
DS+T + ++ CK L +A +L + +R+ ++DG G AK+
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 308 IQSKI 312
I + +
Sbjct: 537 IWADM 541
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 125/265 (47%), Gaps = 4/265 (1%)
Query: 14 NIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKELGD 73
N ++ L + + + A +++ + + G + T NI++ LCK G++ L ++ +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 74 SGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKE 133
G P+ +TY T++ + E+++AM KG++ + Y TVI K G+ +
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 134 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILID 193
A + +M+ G+ D +Y +L+ CK+G + + +M + D + ++
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 194 GLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESMEVK---- 249
++GN+ A ++ + + G + Y ++ + G I A+N+ M +
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM 443
Query: 250 DSFTYSSMVHNLCKAKRLPSASKLL 274
D TY++++H LCK K L A KL
Sbjct: 444 DVVTYNTILHGLCKRKMLGEADKLF 468
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 8/298 (2%)
Query: 11 ATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILKE 70
+ F++++ + R A F L+ GF + N LI L + G + A + +E
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 71 LGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR 130
+ SG N T ++ ++ K + LS ++ KG D Y T+I+A+ G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 131 LKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTI 190
++EA + M M G + +YNT+IN CK GK E A + EM + G D T+
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 191 LIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME--- 247
L+ CK G++ M +L ++ ++ + G +D A+ F S++
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 248 -VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRRE 304
+ D+ Y+ ++ C+ + A L L+ G + ++ GL C+R+
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL----CKRK 459
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGR 60
M+ ++ P +++I++N LC + A R++ + P ++ N +IKG C++G
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 61 LRTARWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK--GYTFDGFGY 118
L+++ G P+ I+Y T++ R ++ M+ + G D F Y
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 119 CTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEK 178
+++ F + ++KEA + +M+ GV D +Y +IN + + L A+ + DEM +
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Query: 179 QGFECD 184
+GF D
Sbjct: 721 RGFSPD 726
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 108/213 (50%), Gaps = 4/213 (1%)
Query: 10 TATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTARWILK 69
T+N +L+G K D A ++ + +P ++Y+IL+ LC G L A +
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 70 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 129
E+ P + +++K R+ G L M +G+ D Y T+I FV+
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 130 RLKEATDYMEQMVTD--GVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYT 187
+ +A +++M + G+ D+ +YN++++ +C++ +++ A ++L +M ++G D+ T
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 188 HTILIDGLCKAGNIKGA-RLHLEYMNKIGFDSN 219
+T +I+G N+ A R+H E + + GF +
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQR-GFSPD 726
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 4/200 (2%)
Query: 79 NAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGRLKEATDYM 138
N + +++ + RK + E + ++ KG+T +I + V+IG ++ A
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 139 EQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCKA 198
+++ GV +++ + N ++N CK+GK+E L +++++G D T+ LI
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 199 GNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM----EVKDSFTY 254
G ++ A + M GF + YN +++ L K GK + A VF M DS TY
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 255 SSMVHNLCKAKRLPSASKLL 274
S++ CK + K+
Sbjct: 344 RSLLMEACKKGDVVETEKVF 363
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 147/310 (47%), Gaps = 12/310 (3%)
Query: 11 ATFNIMLNGLCKNRYTDNALRMFRGL-QKHGFVPELVTYNILIKGLCKAGRLRTARWILK 69
T NI L LCK + R + L HGF P++VTY+ LIK K G L A +++
Sbjct: 381 VTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 70 ELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIG 129
E+G G N IT TI+ + RK +L++ ++G+ D Y T+I F +
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500
Query: 130 RLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHT 189
++++A + ++M + + ++N+LI C GK E A DE+ + G D T
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560
Query: 190 ILIDGLCKAGNIKGARLHLEYMN---KIGFDSNLEAYNCIVDRLGKDGKIDHAINVF--- 243
+I G CK G ++ A E+ N K F + N +++ L K+G + A+N F
Sbjct: 561 SIILGYCKEGRVEKA---FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL 617
Query: 244 -ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCR 302
E EV D+ TY++M+ CK K+L A LL + G+ + + + L G
Sbjct: 618 IEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKL 676
Query: 303 REAKKIQSKI 312
E ++ K
Sbjct: 677 SETDELLKKF 686
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 152/306 (49%), Gaps = 5/306 (1%)
Query: 5 DLTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTA 64
++ P T+NI++NGLC L + ++ P++VTYN LI G + G A
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 65 RWILKELGDSGHAPNAITYTTIMK-CCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIA 123
R +++++ + G N +T+ +K C ++ + ++ + G++ D Y T+I
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 124 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 183
A++K+G L A + M +M G++++ ++ NT+++ CKE KL+ A+ LL+ K+GF
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 184 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 243
D+ T+ LI G + ++ A + M K+ + +N ++ L GK + A+ F
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 244 ----ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHS 299
ES + D T++S++ CK R+ A + +K + +++GL
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 300 GCRREA 305
G +A
Sbjct: 605 GMTEKA 610
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 5/300 (1%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+ P T+N +L + K + + ++K+G VP VTYN L+ G CK G L+ A
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
I++ + + P+ TY ++ + GLE++ AMK D Y T+I
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEM-EKQGFECD 184
++G EA MEQM DGV+ + V++N + CKE K EA + E+ + GF D
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 185 KYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFE 244
T+ LI K G++ GA + M + G N N I+D L K+ K+D A N+
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 245 SME----VKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSG 300
S + D TY +++ + +++ A ++ K + S +++ GL H G
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 139/307 (45%), Gaps = 13/307 (4%)
Query: 1 MICGDLTPCTATFNIMLNGLCKNRYTDN-----ALRMFRGLQKHGFVPELVTYNILIKGL 55
MI L P T N +L GL RY + A +F + K G + T+N+L+ G
Sbjct: 157 MIRLKLKPNLLTCNTLLIGLV--RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGY 214
Query: 56 CKAGRLRTARWILKEL-GDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFD 114
C G+L A +L+ + + P+ +TY TI+K + + E+L MK+ G +
Sbjct: 215 CLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPN 274
Query: 115 GFGYCTVIAAFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLD 174
Y ++ + K+G LKEA +E M V D+ +YN LIN C G + L+D
Sbjct: 275 RVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMD 334
Query: 175 EMEKQGFECDKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDG 234
M+ + D T+ LIDG + G AR +E M G +N +N + L K+
Sbjct: 335 AMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEE 394
Query: 235 KIDHAI-NVFESMEV----KDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQ 289
K + V E +++ D TY +++ K L A +++ + G+++
Sbjct: 395 KREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITL 454
Query: 290 KAVVDGL 296
++D L
Sbjct: 455 NTILDAL 461
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 128/268 (47%), Gaps = 10/268 (3%)
Query: 8 PCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCK---AGRLRTA 64
P A F+I L+ AL++F+ + + P L+T N L+ GL + + + +A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 65 RWILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRK-GYTFDGFGYCTVIA 123
R + ++ G + N T+ ++ K + L +L M + D Y T++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 124 AFVKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQGFEC 183
A K GRL + + + M +G+ + V+YN L+ YCK G L+ A+ +++ M++
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 184 DKYTHTILIDGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVF 243
D T+ ILI+GLC AG+++ ++ M + ++ YN ++D + G A +
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 244 ESMEVKDSFTYSSMVHN-----LCKAKR 266
E ME D + + HN LCK ++
Sbjct: 369 EQME-NDGVKANQVTHNISLKWLCKEEK 395
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Query: 6 LTPCTATFNIMLNGLCKNRYTDNALRMFRGLQKHGFVPELVTYNILIKGLCKAGRLRTAR 65
+TP +TFN ++ GLC + T+ A+ F L + G +P+ T+N +I G CK GR+ A
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 66 WILKELGDSGHAPNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAF 125
E P+ T ++ + + L + + + D Y T+I+AF
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE-REVDTVTYNTMISAF 635
Query: 126 VKIGRLKEATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLL 173
K +LKEA D + +M G++ D +YN+ I+L ++GKL LL
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 77 APNAITYTTIMKCCFRNRKYKLGLEILSAMKRKGYTFDGFGYCTVIAAFVKIGR---LKE 133
P+ + + K + L+I M R + T++ V+ +
Sbjct: 128 PPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 134 ATDYMEQMVTDGVQLDIVSYNTLINLYCKEGKLEAAYLLLDEMEKQ-GFECDKYTHTILI 192
A + + MV GV L++ ++N L+N YC EGKLE A +L+ M + D T+ ++
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 193 DGLCKAGNIKGARLHLEYMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESME----V 248
+ K G + + L M K G N YN +V K G + A + E M+ +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 249 KDSFTYSSMVHNLCKAKRLPSASKLL--LSCLKSGVRILKSAQKAVVDGLRHSGCRREAK 306
D TY+ +++ LC A + +L+ + LK ++ ++DG G EA+
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVV--TYNTLIDGCFELGLSLEAR 365
Query: 307 KIQSKIR 313
K+ ++
Sbjct: 366 KLMEQME 372
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 153 YNTLINLYCKEGKLEAAYLLLDEMEKQGFECDKYTHTILIDGLCK---AGNIKGARLHLE 209
++ ++ Y EGK A + +M + + + T L+ GL + + +I AR +
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 210 YMNKIGFDSNLEAYNCIVDRLGKDGKIDHAINVFESM--EVK---DSFTYSSMVHNLCKA 264
M KIG N++ +N +V+ +GK++ A+ + E M E K D+ TY++++ + K
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 265 KRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRREAKKIQSKIRMAKI 317
RL +LLL K+G+ + +V G G +EA +I ++ +
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,009,595
Number of Sequences: 539616
Number of extensions: 4622592
Number of successful extensions: 21949
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 14259
Number of HSP's gapped (non-prelim): 3057
length of query: 319
length of database: 191,569,459
effective HSP length: 117
effective length of query: 202
effective length of database: 128,434,387
effective search space: 25943746174
effective search space used: 25943746174
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)