Your job contains 1 sequence.
>020982
MPHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYT
AISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEAD
RLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQ
RGAECSIDNTQTTTASDVSEGDGSSDEISSQGDEHCHFQHREREPLFHSIALQRYLLLCS
QDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLGPYSNVLEPVHP
VFNIVLDRYHEAHEFFSRS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020982
(319 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173802 - symbol:ERA1 "ENHANCED RESPONSE TO AB... 1001 6.2e-101 1
UNIPROTKB|P49355 - symbol:FNTB "Protein farnesyltransfera... 498 2.0e-69 2
UNIPROTKB|B4DL54 - symbol:CHURC1-FNTB "cDNA FLJ59570, hig... 488 6.8e-69 2
UNIPROTKB|B4E1A0 - symbol:CHURC1-FNTB "cDNA FLJ58825, hig... 488 6.8e-69 2
UNIPROTKB|H0YHI0 - symbol:CHURC1-FNTB "Protein CHURC1-FNT... 488 6.8e-69 2
UNIPROTKB|P49356 - symbol:FNTB "Protein farnesyltransfera... 488 6.8e-69 2
RGD|620119 - symbol:Fntb "farnesyltransferase, CAAX box, ... 488 1.1e-68 2
UNIPROTKB|Q02293 - symbol:Fntb "Protein farnesyltransfera... 488 1.1e-68 2
UNIPROTKB|F1Q0W7 - symbol:FNTB "Uncharacterized protein" ... 487 2.9e-68 2
MGI|MGI:1861305 - symbol:Fntb "farnesyltransferase, CAAX ... 488 3.7e-68 2
UNIPROTKB|F1SA56 - symbol:CHURC1-FNTB "Uncharacterized pr... 486 3.7e-68 2
ZFIN|ZDB-GENE-030131-2220 - symbol:fntb "farnesyltransfer... 485 1.6e-67 2
FB|FBgn0038424 - symbol:CG17565 species:7227 "Drosophila ... 461 6.9e-63 2
WB|WBGene00006465 - symbol:fntb-1 species:6239 "Caenorhab... 472 2.9e-60 2
UNIPROTKB|Q19752 - symbol:fntb-1 "Protein FNTB-1" species... 472 2.9e-60 2
DICTYBASE|DDB_G0270948 - symbol:fntB "protein farnesyltra... 459 2.6e-53 2
GENEDB_PFALCIPARUM|PF11_0483 - symbol:PF11_0483 "farnesyl... 399 2.3e-52 2
UNIPROTKB|Q8IHP6 - symbol:PF11_0483 "Farnesyltransferase ... 399 2.3e-52 2
SGD|S000002248 - symbol:RAM1 "Beta subunit of the CAAX fa... 391 2.3e-48 2
POMBASE|SPAC17G6.04c - symbol:cpp1 "protein farnesyltrans... 362 7.6e-46 2
ASPGD|ASPL0000050108 - symbol:AN2002 species:162425 "Emer... 344 9.9e-43 2
UNIPROTKB|B3KSC2 - symbol:CHURC1-FNTB "cDNA FLJ35979 fis,... 233 4.6e-42 2
CGD|CAL0001670 - symbol:RAM1 species:5476 "Candida albica... 215 5.4e-40 3
UNIPROTKB|Q59LD0 - symbol:RAM1 "Putative uncharacterized ... 215 5.4e-40 3
DICTYBASE|DDB_G0290671 - symbol:rabggtb "protein geranylg... 264 8.6e-30 2
CGD|CAL0000126 - symbol:BET2 species:5476 "Candida albica... 256 1.4e-29 2
TAIR|locus:2039752 - symbol:PGGT-I species:3702 "Arabidop... 282 4.7e-29 2
ASPGD|ASPL0000011885 - symbol:AN3747 species:162425 "Emer... 257 1.2e-28 2
FB|FBgn0028970 - symbol:betaggt-II "beta subunit of type ... 241 3.2e-28 2
TAIR|locus:2177058 - symbol:RGTB1 "RAB geranylgeranyl tra... 252 2.2e-27 2
SGD|S000006380 - symbol:BET2 "Beta subunit of Type II ger... 247 2.2e-27 2
TAIR|locus:2088614 - symbol:RGTB2 "RAB geranylgeranyl tra... 253 4.5e-27 2
POMBASE|SPAC167.02 - symbol:ptb1 "geranylgeranyltransfera... 232 1.9e-26 2
RGD|3530 - symbol:Rabggtb "Rab geranylgeranyltransferase,... 244 2.5e-26 2
UNIPROTKB|F1LSM6 - symbol:Rabggtb "Geranylgeranyl transfe... 244 2.5e-26 2
UNIPROTKB|F1M052 - symbol:Rabggtb "Geranylgeranyl transfe... 244 2.5e-26 2
MGI|MGI:99537 - symbol:Rabggtb "RAB geranylgeranyl transf... 243 3.1e-26 2
ZFIN|ZDB-GENE-040426-2116 - symbol:rabggtb "Rab geranylge... 241 4.0e-26 2
UNIPROTKB|P53611 - symbol:RABGGTB "Geranylgeranyl transfe... 241 4.0e-26 2
UNIPROTKB|F1P4E5 - symbol:RABGGTB "Uncharacterized protei... 243 5.1e-26 2
UNIPROTKB|G8JKY6 - symbol:RABGGTB "Geranylgeranyl transfe... 239 8.2e-26 2
UNIPROTKB|Q5E9B3 - symbol:RABGGTB "Geranylgeranyl transfe... 239 8.2e-26 2
UNIPROTKB|F1P6X0 - symbol:RABGGTB "Uncharacterized protei... 239 8.2e-26 2
WB|WBGene00015099 - symbol:ggtb-1 species:6239 "Caenorhab... 232 4.4e-25 2
UNIPROTKB|G4MQQ5 - symbol:MGG_09304 "Type-2 protein geran... 214 8.1e-24 2
FB|FBgn0015000 - symbol:betaggt-I "beta subunit of type I... 260 2.6e-22 1
UNIPROTKB|E2QZU5 - symbol:PGGT1B "Uncharacterized protein... 255 7.0e-22 1
UNIPROTKB|Q5EAD5 - symbol:PGGT1B "Geranylgeranyl transfer... 254 9.0e-22 1
UNIPROTKB|F1RLE8 - symbol:PGGT1B "Uncharacterized protein... 249 3.0e-21 1
UNIPROTKB|P53609 - symbol:PGGT1B "Geranylgeranyl transfer... 248 4.6e-21 1
RGD|621754 - symbol:Pggt1b "protein geranylgeranyltransfe... 245 1.1e-20 1
UNIPROTKB|P53610 - symbol:Pggt1b "Geranylgeranyl transfer... 245 1.1e-20 1
UNIPROTKB|F1NE58 - symbol:PGGT1B "Uncharacterized protein... 243 1.3e-20 1
MGI|MGI:1917514 - symbol:Pggt1b "protein geranylgeranyltr... 244 1.4e-20 1
UNIPROTKB|O18197 - symbol:Y48E1B.3 "Protein Y48E1B.3, iso... 241 2.1e-20 1
UNIPROTKB|F1N4H5 - symbol:PGGT1B "Geranylgeranyl transfer... 242 2.4e-20 1
ZFIN|ZDB-GENE-050913-85 - symbol:pggt1b "protein geranylg... 217 2.4e-19 2
WB|WBGene00013002 - symbol:Y48E1B.3 species:6239 "Caenorh... 241 3.6e-19 1
GENEDB_PFALCIPARUM|PFF0120w - symbol:PFF0120w "putative g... 207 5.0e-19 2
POMBASE|SPAC2E1P5.04c - symbol:cwg2 "geranylgeranyltransf... 169 1.3e-17 3
DICTYBASE|DDB_G0269726 - symbol:pggt1b "protein geranylge... 214 2.6e-16 1
UNIPROTKB|D3DQ78 - symbol:RABGGTB "Geranylgeranyl transfe... 145 3.8e-15 2
CGD|CAL0001576 - symbol:CDC43 species:5476 "Candida albic... 87 6.7e-05 2
UNIPROTKB|Q59KC5 - symbol:CDC43 "Putative uncharacterized... 87 6.7e-05 2
SGD|S000003123 - symbol:CDC43 "Beta subunit of geranylger... 107 0.00098 2
>TAIR|locus:2173802 [details] [associations]
symbol:ERA1 "ENHANCED RESPONSE TO ABA 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=IMP] [GO:0005965 "protein farnesyltransferase complex"
evidence=IMP] [GO:0018342 "protein prenylation" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009788 "negative
regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
[GO:0004311 "farnesyltranstransferase activity" evidence=ISS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
[GO:0009934 "regulation of meristem structural organization"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0009414
GO:GO:0042127 GO:GO:0009788 GO:GO:0018343 EMBL:AB010699
GO:GO:0009934 eggNOG:COG5029 GO:GO:0004311 GO:GO:0005965
GO:GO:0004660 GO:GO:0018342 EMBL:AF214106 EMBL:BT030457 EMBL:U46574
EMBL:U44849 IPI:IPI00543310 RefSeq:NP_198844.1 UniGene:At.9205
ProteinModelPortal:Q38920 SMR:Q38920 IntAct:Q38920 STRING:Q38920
PaxDb:Q38920 PRIDE:Q38920 EnsemblPlants:AT5G40280.1 GeneID:834026
KEGG:ath:AT5G40280 TAIR:At5g40280 HOGENOM:HOG000190594
InParanoid:Q38920 KO:K05954 OMA:QDASQPW ProtClustDB:PLN02710
BioCyc:ARA:AT5G40280-MONOMER BioCyc:MetaCyc:AT5G40280-MONOMER
ArrayExpress:Q38920 Genevestigator:Q38920 GermOnline:AT5G40280
PANTHER:PTHR11774:SF6 Uniprot:Q38920
Length = 482
Score = 1001 (357.4 bits), Expect = 6.2e-101, P = 6.2e-101
Identities = 195/327 (59%), Positives = 238/327 (72%)
Query: 1 MPHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYT 60
+PHLATTYAAVNAL++LGG+K+L SINR K+ FL+ MKD SG FRMHD GE+DVRACYT
Sbjct: 155 LPHLATTYAAVNALVTLGGDKALSSINREKMSCFLRRMKDTSGGFRMHDMGEMDVRACYT 214
Query: 61 AISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEAD 120
AISVASILNI+DDEL Q +G+YILSCQTYEGGI GEPGSEAHGGYT+CGLAAMILINE D
Sbjct: 215 AISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVD 274
Query: 121 RLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF-----HSIIGESP 175
RL+LD+L+ W V RQGVE GFQGRTNKLVDGCY+FWQ LL+R H + G S
Sbjct: 275 RLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAAPCVLLQRLYSTNDHDVHGSSH 334
Query: 176 TP--VDQRGAECSIDNTQTTTAXXXXXXXXXXXXXXXXXXXHCH-FQHREREPLFHSIAL 232
++ D+ + + H + +R + +F S+ L
Sbjct: 335 ISEGTNEEHHAHDEDDLEDSDDDDDSDEDNDEDSVNGHRIHHTSTYINRRMQLVFDSLGL 394
Query: 233 QRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLGPYS 292
QRY+LLCS+ P GG RDK RKPRD+YHTCYCLSGLS+ QH+WLKDED+ PL R ++G YS
Sbjct: 395 QRYVLLCSKIPDGGFRDKPRKPRDFYHTCYCLSGLSVAQHAWLKDEDTPPLTRDIMGGYS 454
Query: 293 NVLEPVHPVFNIVLDRYHEAHEFFSRS 319
N+LEPV + NIV+D+Y+EA EFF ++
Sbjct: 455 NLLEPVQLLHNIVMDQYNEAIEFFFKA 481
>UNIPROTKB|P49355 [details] [associations]
symbol:FNTB "Protein farnesyltransferase subunit beta"
species:9913 "Bos taurus" [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0004660 "protein farnesyltransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 GO:GO:0008285
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 eggNOG:COG5029 GO:GO:0004311
GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594 KO:K05954
PANTHER:PTHR11774:SF6 EMBL:L00633 EMBL:BC123393 IPI:IPI00705098
PIR:C49274 RefSeq:NP_786999.1 UniGene:Bt.4529
ProteinModelPortal:P49355 SMR:P49355 STRING:P49355
Ensembl:ENSBTAT00000007751 GeneID:327686 KEGG:bta:327686 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 InParanoid:P49355
OMA:HPVYNIC OrthoDB:EOG4KKZ33 BindingDB:P49355 ChEMBL:CHEMBL4671
NextBio:20810151 Uniprot:P49355
Length = 437
Score = 498 (180.4 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 93/166 (56%), Positives = 117/166 (70%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHLA TYAAVNAL +G E++ INR K+ +L +K P G+F MHD GE+DVR+ Y A
Sbjct: 148 PHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLKQPDGSFLMHDGGEVDVRSAYCA 207
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
SVAS+ NI+ +L + +I CQ +EGGI G PG EAHGGYTFCGLAA++++ +
Sbjct: 208 ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERS 267
Query: 122 LDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R
Sbjct: 268 LNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
Score = 224 (83.9 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 47/91 (51%), Positives = 56/91 (61%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPTGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
VLG N L+P HPV+NI D+ +A F
Sbjct: 385 VVLGVPENALQPTHPVYNIGPDKVIQATMHF 415
Score = 86 (35.3 bits), Expect = 6.1e-25, Sum P(2) = 6.1e-25
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 26 INRSKVYTFLKCMKDPSGAFRMHDAGE-IDVRACYTAISVASILNILDDELLQNVGN--- 81
+ R K + +LK G ++ DA E +D + + L +LD+ + Q V
Sbjct: 73 LQREKHFHYLK-----RGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQMVATDVC 127
Query: 82 -YILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWVVFRQGV 137
++ CQ+ EGG G PG H T+ + A+ +I EA D ++ + L+ ++ +
Sbjct: 128 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLKQP 187
Query: 138 EGGF 141
+G F
Sbjct: 188 DGSF 191
Score = 79 (32.9 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 30/154 (19%), Positives = 57/154 (37%)
Query: 20 EKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILD--DEL-L 76
++ +P + + V FL+ + P G F + Y A++ I+ + D +
Sbjct: 115 DEPIPQMVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINR 174
Query: 77 QNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQG 136
+ + Y+ S + +G G E +C + L N + W+ Q
Sbjct: 175 EKLLQYLYSLKQPDGSFLMHDGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQN 234
Query: 137 VEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
EGG G G Y+F +L++ S+
Sbjct: 235 WEGGIGGVPGMEAHGGYTFCGLAALVILKKERSL 268
Score = 50 (22.7 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 59 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 114
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 115 LINEADRLDLDALIG---WVVFRQGVE 138
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSRWMFHQQALQ 336
>UNIPROTKB|B4DL54 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ59570, highly similar to
Protein farnesyltransferase subunit beta (EC 2.5.1.58)"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR001330
InterPro:IPR009508 InterPro:IPR026872 Pfam:PF00432 Pfam:PF06573
ProDom:PD355092 GO:GO:0007275 GO:GO:0045893 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 HOGENOM:HOG000190594
PANTHER:PTHR11774:SF6 HOVERGEN:HBG008173 OMA:HPVYNIC
UniGene:Hs.325531 EMBL:AL139022 EMBL:AL135745 HGNC:HGNC:42960
EMBL:AK296850 IPI:IPI00909112 RefSeq:NP_001189488.1 SMR:B4DL54
STRING:B4DL54 Ensembl:ENST00000447296 GeneID:100529261
KEGG:hsa:100529261 UCSC:uc010tsl.2 CTD:100529261
GenomeRNAi:100529261 Uniprot:B4DL54
Length = 471
Score = 488 (176.8 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 92/166 (55%), Positives = 115/166 (69%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHLA TYAAVNAL +G E++ INR K+ +L +K P G+F MH GE+DVR+ Y A
Sbjct: 182 PHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCA 241
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
SVAS+ NI+ +L + +I CQ +EGGI G PG EAHGGYTFCGLAA++++
Sbjct: 242 ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERS 301
Query: 122 LDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R
Sbjct: 302 LNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 347
Score = 229 (85.7 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 363 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 418
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
VLG N L+P HPV+NI D+ +A +F
Sbjct: 419 VVLGVPENALQPTHPVYNIGPDKVIQATTYF 449
Score = 86 (35.3 bits), Expect = 2.6e-25, Sum P(2) = 2.6e-25
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 26 INRSKVYTFLKCMKDPSGAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVG 80
+ R K + +LK G ++ DA E +D + + L +LD+ + Q +V
Sbjct: 107 LQREKHFHYLK-----RGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVC 161
Query: 81 NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDL---DALIGWVVFRQGV 137
++ CQ+ EGG G PG H T+ + A+ +I + D+ + L+ ++ +
Sbjct: 162 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQP 221
Query: 138 EGGF 141
+G F
Sbjct: 222 DGSF 225
Score = 84 (34.6 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 31/154 (20%), Positives = 58/154 (37%)
Query: 20 EKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDD-ELL-- 76
++ +P I + V FL+ + P G F + Y A++ I+ + +++
Sbjct: 149 DEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINR 208
Query: 77 QNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQG 136
+ + Y+ S + +G G E +C + L N + W+ Q
Sbjct: 209 EKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQN 268
Query: 137 VEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
EGG G G Y+F +L+R S+
Sbjct: 269 WEGGIGGVPGMEAHGGYTFCGLAALVILKRERSL 302
Score = 49 (22.3 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 59 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 114
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 285 YTFCGLAALV-ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 343
Query: 115 LINEADRLDLDALIG---WVVFRQGVE 138
L++ A D + W+ +Q ++
Sbjct: 344 LLHRALHAQGDPALSMSHWMFHQQALQ 370
>UNIPROTKB|B4E1A0 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ58825, highly similar to
Protein farnesyltransferase subunit beta (EC 2.5.1.58)"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 PANTHER:PTHR11774:SF6
HOVERGEN:HBG008173 UniGene:Hs.325531 EMBL:AL139022 EMBL:AL135745
HGNC:HGNC:42960 GeneID:100529261 KEGG:hsa:100529261 CTD:100529261
GenomeRNAi:100529261 EMBL:AK303739 IPI:IPI00984229
RefSeq:NP_001189487.1 SMR:B4E1A0 STRING:B4E1A0
Ensembl:ENST00000542227 UCSC:uc010tsm.2 Uniprot:B4E1A0
Length = 391
Score = 488 (176.8 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 92/166 (55%), Positives = 115/166 (69%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHLA TYAAVNAL +G E++ INR K+ +L +K P G+F MH GE+DVR+ Y A
Sbjct: 102 PHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCA 161
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
SVAS+ NI+ +L + +I CQ +EGGI G PG EAHGGYTFCGLAA++++
Sbjct: 162 ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERS 221
Query: 122 LDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R
Sbjct: 222 LNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 267
Score = 229 (85.7 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 283 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 338
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
VLG N L+P HPV+NI D+ +A +F
Sbjct: 339 VVLGVPENALQPTHPVYNIGPDKVIQATTYF 369
Score = 86 (35.3 bits), Expect = 6.7e-26, Sum P(2) = 6.7e-26
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 26 INRSKVYTFLKCMKDPSGAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVG 80
+ R K + +LK G ++ DA E +D + + L +LD+ + Q +V
Sbjct: 27 LQREKHFHYLK-----RGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVC 81
Query: 81 NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDL---DALIGWVVFRQGV 137
++ CQ+ EGG G PG H T+ + A+ +I + D+ + L+ ++ +
Sbjct: 82 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQP 141
Query: 138 EGGF 141
+G F
Sbjct: 142 DGSF 145
Score = 84 (34.6 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 31/154 (20%), Positives = 58/154 (37%)
Query: 20 EKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDD-ELL-- 76
++ +P I + V FL+ + P G F + Y A++ I+ + +++
Sbjct: 69 DEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINR 128
Query: 77 QNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQG 136
+ + Y+ S + +G G E +C + L N + W+ Q
Sbjct: 129 EKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQN 188
Query: 137 VEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
EGG G G Y+F +L+R S+
Sbjct: 189 WEGGIGGVPGMEAHGGYTFCGLAALVILKRERSL 222
Score = 49 (22.3 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 59 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 114
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 205 YTFCGLAALV-ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 263
Query: 115 LINEADRLDLDALIG---WVVFRQGVE 138
L++ A D + W+ +Q ++
Sbjct: 264 LLHRALHAQGDPALSMSHWMFHQQALQ 290
>UNIPROTKB|H0YHI0 [details] [associations]
symbol:CHURC1-FNTB "Protein CHURC1-FNTB" species:9606 "Homo
sapiens" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005965
"protein farnesyltransferase complex" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001330
InterPro:IPR009508 InterPro:IPR026872 Pfam:PF00432 Pfam:PF06573
ProDom:PD355092 GO:GO:0007275 GO:GO:0045893 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 GO:GO:0005965 PANTHER:PTHR11774:SF6 OMA:HPVYNIC
EMBL:AL139022 EMBL:AL135745 HGNC:HGNC:42960 Ensembl:ENST00000549987
Uniprot:H0YHI0
Length = 472
Score = 488 (176.8 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 92/166 (55%), Positives = 115/166 (69%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHLA TYAAVNAL +G E++ INR K+ +L +K P G+F MH GE+DVR+ Y A
Sbjct: 183 PHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCA 242
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
SVAS+ NI+ +L + +I CQ +EGGI G PG EAHGGYTFCGLAA++++
Sbjct: 243 ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERS 302
Query: 122 LDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R
Sbjct: 303 LNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 348
Score = 229 (85.7 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 364 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 419
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
VLG N L+P HPV+NI D+ +A +F
Sbjct: 420 VVLGVPENALQPTHPVYNIGPDKVIQATTYF 450
Score = 86 (35.3 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 26 INRSKVYTFLKCMKDPSGAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVG 80
+ R K + +LK G ++ DA E +D + + L +LD+ + Q +V
Sbjct: 108 LQREKHFHYLK-----RGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVC 162
Query: 81 NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDL---DALIGWVVFRQGV 137
++ CQ+ EGG G PG H T+ + A+ +I + D+ + L+ ++ +
Sbjct: 163 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQP 222
Query: 138 EGGF 141
+G F
Sbjct: 223 DGSF 226
Score = 84 (34.6 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 31/154 (20%), Positives = 58/154 (37%)
Query: 20 EKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDD-ELL-- 76
++ +P I + V FL+ + P G F + Y A++ I+ + +++
Sbjct: 150 DEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINR 209
Query: 77 QNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQG 136
+ + Y+ S + +G G E +C + L N + W+ Q
Sbjct: 210 EKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQN 269
Query: 137 VEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
EGG G G Y+F +L+R S+
Sbjct: 270 WEGGIGGVPGMEAHGGYTFCGLAALVILKRERSL 303
Score = 49 (22.3 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 59 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 114
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 286 YTFCGLAALV-ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 344
Query: 115 LINEADRLDLDALIG---WVVFRQGVE 138
L++ A D + W+ +Q ++
Sbjct: 345 LLHRALHAQGDPALSMSHWMFHQQALQ 371
>UNIPROTKB|P49356 [details] [associations]
symbol:FNTB "Protein farnesyltransferase subunit beta"
species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0018343 "protein farnesylation" evidence=IDA] [GO:0004660
"protein farnesyltransferase activity" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 GO:GO:0005875 GO:GO:0008285
EMBL:CH471061 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008144 GO:GO:0008270 GO:GO:0034097 GO:GO:0014070
GO:GO:0042277 GO:GO:0010035 GO:GO:0042060 GO:GO:0018343
GO:GO:0048146 GO:GO:0045787 GO:GO:0004311 GO:GO:0005965
GO:GO:0004660 PDB:1JCQ PDB:1LD7 PDB:1LD8 PDB:1MZC PDB:1S63 PDB:1SA4
PDB:1TN6 PDB:2F0Y PDB:2H6F PDB:2H6G PDB:2H6H PDB:2H6I PDB:2IEJ
PDB:3E37 PDBsum:1JCQ PDBsum:1LD7 PDBsum:1LD8 PDBsum:1MZC
PDBsum:1S63 PDBsum:1SA4 PDBsum:1TN6 PDBsum:2F0Y PDBsum:2H6F
PDBsum:2H6G PDBsum:2H6H PDBsum:2H6I PDBsum:2IEJ PDBsum:3E37
GO:GO:0019840 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
HOVERGEN:HBG008173 OrthoDB:EOG4KKZ33 EMBL:L00635 EMBL:AK315714
EMBL:BC020232 EMBL:L10414 IPI:IPI00026817 PIR:B49274
RefSeq:NP_002019.1 UniGene:Hs.325531 ProteinModelPortal:P49356
SMR:P49356 IntAct:P49356 MINT:MINT-238879 STRING:P49356
PhosphoSite:P49356 DMDM:1346696 PeptideAtlas:P49356 PRIDE:P49356
DNASU:2342 Ensembl:ENST00000246166 GeneID:2342 KEGG:hsa:2342
UCSC:uc001xia.3 GeneCards:GC14P065454 HGNC:HGNC:3785 MIM:134636
neXtProt:NX_P49356 PharmGKB:PA28202 InParanoid:P49356 OMA:YWIANSL
PhylomeDB:P49356 BindingDB:P49356 ChEMBL:CHEMBL272
EvolutionaryTrace:P49356 GenomeRNAi:2342 NextBio:9505
ArrayExpress:P49356 Bgee:P49356 CleanEx:HS_FNTB
Genevestigator:P49356 GermOnline:ENSG00000125954 Uniprot:P49356
Length = 437
Score = 488 (176.8 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 92/166 (55%), Positives = 115/166 (69%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHLA TYAAVNAL +G E++ INR K+ +L +K P G+F MH GE+DVR+ Y A
Sbjct: 148 PHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCA 207
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
SVAS+ NI+ +L + +I CQ +EGGI G PG EAHGGYTFCGLAA++++
Sbjct: 208 ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERS 267
Query: 122 LDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R
Sbjct: 268 LNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
Score = 229 (85.7 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
VLG N L+P HPV+NI D+ +A +F
Sbjct: 385 VVLGVPENALQPTHPVYNIGPDKVIQATTYF 415
Score = 86 (35.3 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 30/124 (24%), Positives = 57/124 (45%)
Query: 26 INRSKVYTFLKCMKDPSGAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVG 80
+ R K + +LK G ++ DA E +D + + L +LD+ + Q +V
Sbjct: 73 LQREKHFHYLK-----RGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVC 127
Query: 81 NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDL---DALIGWVVFRQGV 137
++ CQ+ EGG G PG H T+ + A+ +I + D+ + L+ ++ +
Sbjct: 128 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQP 187
Query: 138 EGGF 141
+G F
Sbjct: 188 DGSF 191
Score = 84 (34.6 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 31/154 (20%), Positives = 58/154 (37%)
Query: 20 EKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDD-ELL-- 76
++ +P I + V FL+ + P G F + Y A++ I+ + +++
Sbjct: 115 DEPIPQIVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINR 174
Query: 77 QNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQG 136
+ + Y+ S + +G G E +C + L N + W+ Q
Sbjct: 175 EKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQN 234
Query: 137 VEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
EGG G G Y+F +L+R S+
Sbjct: 235 WEGGIGGVPGMEAHGGYTFCGLAALVILKRERSL 268
Score = 49 (22.3 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 59 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 114
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 115 LINEADRLDLDALIG---WVVFRQGVE 138
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSHWMFHQQALQ 336
>RGD|620119 [details] [associations]
symbol:Fntb "farnesyltransferase, CAAX box, beta" species:10116
"Rattus norvegicus" [GO:0004311 "farnesyltranstransferase activity"
evidence=IEA;ISO] [GO:0004660 "protein farnesyltransferase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA;ISO] [GO:0010035 "response to inorganic
substance" evidence=IMP] [GO:0014070 "response to organic cyclic
compound" evidence=IMP] [GO:0018343 "protein farnesylation"
evidence=IEA;ISO] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0042060 "wound healing" evidence=IEA;ISO]
[GO:0043234 "protein complex" evidence=IDA] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IEA;ISO] [GO:0051770 "positive
regulation of nitric-oxide synthase biosynthetic process"
evidence=IMP] [GO:0008144 "drug binding" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0019840 "isoprenoid binding"
evidence=IDA] [GO:0042277 "peptide binding" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 RGD:620119
GO:GO:0005875 GO:GO:0008285 GO:GO:0043234 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284 GO:GO:0034097
GO:GO:0014070 GO:GO:0010035 GO:GO:0042060 GO:GO:0018343
GO:GO:0048146 GO:GO:0045787 GO:GO:0051770 eggNOG:COG5029
GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:1D8D PDB:1D8E
PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7 PDB:1JCR PDB:1JCS
PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N94 PDB:1N95 PDB:1N9A PDB:1NI1
PDB:1NL4 PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ PDB:1QE2
PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1X81 PDB:2BED PDB:2FTI PDB:2R2L
PDB:2ZIR PDB:2ZIS PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33 PDB:3E34
PDB:3EU5 PDB:3EUV PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM PDB:4GTO
PDB:4GTP PDB:4GTQ PDB:4GTR PDBsum:1D8D PDBsum:1D8E PDBsum:1FPP
PDBsum:1FT1 PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7 PDBsum:1JCR
PDBsum:1JCS PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR PDBsum:1N94
PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1 PDBsum:1NL4 PDBsum:1O1R
PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M PDBsum:1QBQ PDBsum:1QE2
PDBsum:1SA5 PDBsum:1TN7 PDBsum:1TN8 PDBsum:1X81 PDBsum:2BED
PDBsum:2FTI PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS PDBsum:3DPY
PDBsum:3E30 PDBsum:3E32 PDBsum:3E33 PDBsum:3E34 PDBsum:3EU5
PDBsum:3EUV PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ PDBsum:4GTM
PDBsum:4GTO PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:M69056 EMBL:BC087675 IPI:IPI00205139
PIR:A40037 RefSeq:NP_742031.1 UniGene:Rn.8873
ProteinModelPortal:Q02293 SMR:Q02293 DIP:DIP-6132N IntAct:Q02293
MINT:MINT-121917 STRING:Q02293 PhosphoSite:Q02293
Ensembl:ENSRNOT00000010588 GeneID:64511 KEGG:rno:64511
UCSC:RGD:620119 InParanoid:Q02293 SABIO-RK:Q02293 BindingDB:Q02293
ChEMBL:CHEMBL4890 EvolutionaryTrace:Q02293 NextBio:613294
Genevestigator:Q02293 GermOnline:ENSRNOG00000007660 Uniprot:Q02293
Length = 437
Score = 488 (176.8 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 92/166 (55%), Positives = 116/166 (69%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHLA TYAAVNAL +G E++ INR K+ +L +K P G+F MH GE+DVR+ Y A
Sbjct: 148 PHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCA 207
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
SVAS+ NI+ +L + +I CQ +EGGI G PG EAHGGYTFCGLAA++++ +
Sbjct: 208 ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERS 267
Query: 122 LDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R
Sbjct: 268 LNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
Score = 227 (85.0 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
V+G NVL+P HPV+NI D+ +A F
Sbjct: 385 VVMGVPENVLQPTHPVYNIGPDKVIQATTHF 415
Score = 85 (35.0 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 35/158 (22%), Positives = 60/158 (37%)
Query: 20 EKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASIL------NILDD 73
++ +P I + V FL+ + P G F + Y A++ I+ N+++
Sbjct: 115 DEPIPQIVATDVCQFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINR 174
Query: 74 E-LLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVV 132
E LLQ Y+ S + +G G E +C + L N + W+
Sbjct: 175 EKLLQ----YLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIA 230
Query: 133 FRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
Q EGG G G Y+F +L++ S+
Sbjct: 231 RCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSL 268
Score = 78 (32.5 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 30/124 (24%), Positives = 59/124 (47%)
Query: 26 INRSKVYTFLKCMKDPSGAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVG 80
+ R K + +LK G ++ DA E +D + + L +LD+ + Q +V
Sbjct: 73 LQREKHFHYLK-----RGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVC 127
Query: 81 NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWVVFRQGV 137
++ CQ+ +GG G PG H T+ + A+ +I EA + ++ + L+ ++ +
Sbjct: 128 QFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQP 187
Query: 138 EGGF 141
+G F
Sbjct: 188 DGSF 191
Score = 50 (22.7 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 59 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 114
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 115 LINEADRLDLDALIG---WVVFRQGVE 138
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSHWMFHQQALQ 336
>UNIPROTKB|Q02293 [details] [associations]
symbol:Fntb "Protein farnesyltransferase subunit beta"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
RGD:620119 GO:GO:0005875 GO:GO:0008285 GO:GO:0043234
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0014070 GO:GO:0010035 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0045787 GO:GO:0051770
eggNOG:COG5029 GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:1D8D
PDB:1D8E PDB:1FPP PDB:1FT1 PDB:1FT2 PDB:1FTI PDB:1HZ7 PDB:1JCR
PDB:1JCS PDB:1KZO PDB:1KZP PDB:1KZR PDB:1N94 PDB:1N95 PDB:1N9A
PDB:1NI1 PDB:1NL4 PDB:1O1R PDB:1O1S PDB:1O1T PDB:1O5M PDB:1QBQ
PDB:1QE2 PDB:1SA5 PDB:1TN7 PDB:1TN8 PDB:1X81 PDB:2BED PDB:2FTI
PDB:2R2L PDB:2ZIR PDB:2ZIS PDB:3DPY PDB:3E30 PDB:3E32 PDB:3E33
PDB:3E34 PDB:3EU5 PDB:3EUV PDB:3FTI PDB:3KSL PDB:3KSQ PDB:4GTM
PDB:4GTO PDB:4GTP PDB:4GTQ PDB:4GTR PDBsum:1D8D PDBsum:1D8E
PDBsum:1FPP PDBsum:1FT1 PDBsum:1FT2 PDBsum:1FTI PDBsum:1HZ7
PDBsum:1JCR PDBsum:1JCS PDBsum:1KZO PDBsum:1KZP PDBsum:1KZR
PDBsum:1N94 PDBsum:1N95 PDBsum:1N9A PDBsum:1NI1 PDBsum:1NL4
PDBsum:1O1R PDBsum:1O1S PDBsum:1O1T PDBsum:1O5M PDBsum:1QBQ
PDBsum:1QE2 PDBsum:1SA5 PDBsum:1TN7 PDBsum:1TN8 PDBsum:1X81
PDBsum:2BED PDBsum:2FTI PDBsum:2R2L PDBsum:2ZIR PDBsum:2ZIS
PDBsum:3DPY PDBsum:3E30 PDBsum:3E32 PDBsum:3E33 PDBsum:3E34
PDBsum:3EU5 PDBsum:3EUV PDBsum:3FTI PDBsum:3KSL PDBsum:3KSQ
PDBsum:4GTM PDBsum:4GTO PDBsum:4GTP PDBsum:4GTQ PDBsum:4GTR
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:M69056 EMBL:BC087675 IPI:IPI00205139
PIR:A40037 RefSeq:NP_742031.1 UniGene:Rn.8873
ProteinModelPortal:Q02293 SMR:Q02293 DIP:DIP-6132N IntAct:Q02293
MINT:MINT-121917 STRING:Q02293 PhosphoSite:Q02293
Ensembl:ENSRNOT00000010588 GeneID:64511 KEGG:rno:64511
UCSC:RGD:620119 InParanoid:Q02293 SABIO-RK:Q02293 BindingDB:Q02293
ChEMBL:CHEMBL4890 EvolutionaryTrace:Q02293 NextBio:613294
Genevestigator:Q02293 GermOnline:ENSRNOG00000007660 Uniprot:Q02293
Length = 437
Score = 488 (176.8 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 92/166 (55%), Positives = 116/166 (69%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHLA TYAAVNAL +G E++ INR K+ +L +K P G+F MH GE+DVR+ Y A
Sbjct: 148 PHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCA 207
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
SVAS+ NI+ +L + +I CQ +EGGI G PG EAHGGYTFCGLAA++++ +
Sbjct: 208 ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERS 267
Query: 122 LDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R
Sbjct: 268 LNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
Score = 227 (85.0 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
V+G NVL+P HPV+NI D+ +A F
Sbjct: 385 VVMGVPENVLQPTHPVYNIGPDKVIQATTHF 415
Score = 85 (35.0 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 35/158 (22%), Positives = 60/158 (37%)
Query: 20 EKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASIL------NILDD 73
++ +P I + V FL+ + P G F + Y A++ I+ N+++
Sbjct: 115 DEPIPQIVATDVCQFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINR 174
Query: 74 E-LLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVV 132
E LLQ Y+ S + +G G E +C + L N + W+
Sbjct: 175 EKLLQ----YLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIA 230
Query: 133 FRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
Q EGG G G Y+F +L++ S+
Sbjct: 231 RCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSL 268
Score = 78 (32.5 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 30/124 (24%), Positives = 59/124 (47%)
Query: 26 INRSKVYTFLKCMKDPSGAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVG 80
+ R K + +LK G ++ DA E +D + + L +LD+ + Q +V
Sbjct: 73 LQREKHFHYLK-----RGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVC 127
Query: 81 NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWVVFRQGV 137
++ CQ+ +GG G PG H T+ + A+ +I EA + ++ + L+ ++ +
Sbjct: 128 QFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQP 187
Query: 138 EGGF 141
+G F
Sbjct: 188 DGSF 191
Score = 50 (22.7 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 59 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 114
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 115 LINEADRLDLDALIG---WVVFRQGVE 138
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSHWMFHQQALQ 336
>UNIPROTKB|F1Q0W7 [details] [associations]
symbol:FNTB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0004311 GO:GO:0005965 KO:K05954
PANTHER:PTHR11774:SF6 CTD:2342 GeneTree:ENSGT00550000075042
OMA:HPVYNIC EMBL:AAEX03005789 RefSeq:XP_547857.2
Ensembl:ENSCAFT00000025678 GeneID:490735 KEGG:cfa:490735
Uniprot:F1Q0W7
Length = 437
Score = 487 (176.5 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 92/166 (55%), Positives = 116/166 (69%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHLA TYAAVNAL +G E++ INR K+ +L +K P G+F MH GE+DVR+ Y A
Sbjct: 148 PHLAPTYAAVNALCIIGTEEAYGVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCA 207
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
SVAS+ NI+ +L + +I CQ +EGGI G PG EAHGGYTFCGLAA++++ +
Sbjct: 208 ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERY 267
Query: 122 LDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R
Sbjct: 268 LNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
Score = 224 (83.9 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 47/91 (51%), Positives = 56/91 (61%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
VLG N L+P HPV+NI D+ +A F
Sbjct: 385 VVLGVPENALQPTHPVYNIGPDKVIQATMHF 415
Score = 80 (33.2 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 29/124 (23%), Positives = 56/124 (45%)
Query: 26 INRSKVYTFLKCMKDPSGAFRMHDAGE-IDVRACYTAISVASILNILDDELLQNVGN--- 81
+ R K + +LK G ++ DA E +D + + L +LD+ + Q V
Sbjct: 73 LQREKHFHYLK-----RGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQMVATDVC 127
Query: 82 -YILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR---LDLDALIGWVVFRQGV 137
++ CQ+ EGG G PG H T+ + A+ +I + ++ + L+ ++ +
Sbjct: 128 QFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYGVINREKLLQYLYSLKQP 187
Query: 138 EGGF 141
+G F
Sbjct: 188 DGSF 191
Score = 73 (30.8 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 32/154 (20%), Positives = 56/154 (36%)
Query: 20 EKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILN-------ILD 72
++ +P + + V FL+ + P G F + Y A++ I+ I
Sbjct: 115 DEPIPQMVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYGVINR 174
Query: 73 DELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVV 132
++LLQ Y+ S + +G G E +C + L N + W+
Sbjct: 175 EKLLQ----YLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIA 230
Query: 133 FRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
Q EGG G G Y+F +L++
Sbjct: 231 RCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKK 264
Score = 50 (22.7 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 59 YTAISVASILNILDDELLQNVGN---YILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 114
YT +A+++ IL E N+ + ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKKERYLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 115 LINEADRLDLDALIG---WVVFRQGVE 138
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSHWMFHQQALQ 336
>MGI|MGI:1861305 [details] [associations]
symbol:Fntb "farnesyltransferase, CAAX box, beta"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004660 "protein farnesyltransferase activity"
evidence=ISO] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO;IMP] [GO:0008285 "negative regulation
of cell proliferation" evidence=IMP] [GO:0010035 "response to
inorganic substance" evidence=ISO] [GO:0014070 "response to organic
cyclic compound" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=ISO]
[GO:0019840 "isoprenoid binding" evidence=ISO] [GO:0034097
"response to cytokine stimulus" evidence=ISO] [GO:0042060 "wound
healing" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0042277 "peptide binding"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045787 "positive regulation of cell cycle" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048146 "positive
regulation of fibroblast proliferation" evidence=IMP] [GO:0051770
"positive regulation of nitric-oxide synthase biosynthetic process"
evidence=ISO] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
MGI:MGI:1861305 GO:GO:0005875 GO:GO:0008285 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008144 GO:GO:0008270
GO:GO:0034097 GO:GO:0014070 GO:GO:0042277 GO:GO:0010035
GO:GO:0042060 GO:GO:0018343 GO:GO:0048146 GO:GO:0045787
GO:GO:0004311 GO:GO:0005965 GO:GO:0004660 PDB:3PZ4 PDBsum:3PZ4
GO:GO:0019840 HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6
CTD:2342 GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173
OMA:HPVYNIC OrthoDB:EOG4KKZ33 EMBL:BC031417 IPI:IPI00169914
RefSeq:NP_666039.1 UniGene:Mm.151174 ProteinModelPortal:Q8K2I1
SMR:Q8K2I1 STRING:Q8K2I1 PhosphoSite:Q8K2I1 PRIDE:Q8K2I1
Ensembl:ENSMUST00000041008 GeneID:110606 KEGG:mmu:110606
UCSC:uc007nyu.1 InParanoid:Q8K2I1 BindingDB:Q8K2I1
ChEMBL:CHEMBL2631 ChiTaRS:FNTB NextBio:364317 Bgee:Q8K2I1
CleanEx:MM_FNTB Genevestigator:Q8K2I1 GermOnline:ENSMUSG00000033373
Uniprot:Q8K2I1
Length = 437
Score = 488 (176.8 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 92/166 (55%), Positives = 116/166 (69%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHLA TYAAVNAL +G E++ INR K+ +L +K P G+F MH GE+DVR+ Y A
Sbjct: 148 PHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCA 207
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
SVAS+ NI+ +L + +I CQ +EGGI G PG EAHGGYTFCGLAA++++ +
Sbjct: 208 ASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERS 267
Query: 122 LDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R
Sbjct: 268 LNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
Score = 222 (83.2 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 46/91 (50%), Positives = 57/91 (62%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 329 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 384
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
V+G NVL+P HPV+NI ++ +A F
Sbjct: 385 MVMGVPENVLQPTHPVYNIGPEKVIQATTHF 415
Score = 85 (35.0 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 35/158 (22%), Positives = 60/158 (37%)
Query: 20 EKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASIL------NILDD 73
++ +P I + V FL+ + P G F + Y A++ I+ N+++
Sbjct: 115 DEPIPQIVATDVCQFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINR 174
Query: 74 E-LLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVV 132
E LLQ Y+ S + +G G E +C + L N + W+
Sbjct: 175 EKLLQ----YLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIA 230
Query: 133 FRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
Q EGG G G Y+F +L++ S+
Sbjct: 231 RCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERSL 268
Score = 78 (32.5 bits), Expect = 7.1e-24, Sum P(2) = 7.1e-24
Identities = 30/124 (24%), Positives = 59/124 (47%)
Query: 26 INRSKVYTFLKCMKDPSGAFRMHDAGE-IDVRACYTAISVASILNILDDELLQ----NVG 80
+ R K + +LK G ++ DA E +D + + L +LD+ + Q +V
Sbjct: 73 LQREKHFHYLK-----RGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVC 127
Query: 81 NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWVVFRQGV 137
++ CQ+ +GG G PG H T+ + A+ +I EA + ++ + L+ ++ +
Sbjct: 128 QFLELCQSPDGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYNVINREKLLQYLYSLKQP 187
Query: 138 EGGF 141
+G F
Sbjct: 188 DGSF 191
Score = 50 (22.7 bits), Expect = 5.9e-21, Sum P(2) = 5.9e-21
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 59 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 114
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 251 YTFCGLAALV-ILKKERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 309
Query: 115 LINEADRLDLDALIG---WVVFRQGVE 138
L++ A D + W+ +Q ++
Sbjct: 310 LLHRALHAQGDPALSMSHWMFHQQALQ 336
>UNIPROTKB|F1SA56 [details] [associations]
symbol:CHURC1-FNTB "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0042060 "wound healing"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042060
GO:GO:0018343 GO:GO:0048146 GO:GO:0004311 GO:GO:0005965
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:HPVYNIC
EMBL:CU655896 Ensembl:ENSSSCT00000002539 Uniprot:F1SA56
Length = 336
Score = 486 (176.1 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 92/166 (55%), Positives = 116/166 (69%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHLA TYAAVNAL +G E++ INR K+ +L +K P G+F MH GE+DVR+ Y A
Sbjct: 47 PHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCA 106
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
SVAS+ NI+ +L + +I CQ +EGGI G PG EAHGGYTFCGLAA++++ +
Sbjct: 107 ASVASLTNIVTPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERC 166
Query: 122 LDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R
Sbjct: 167 LNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 212
Score = 224 (83.9 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
Identities = 47/91 (51%), Positives = 56/91 (61%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 228 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 283
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
VLG N L+P HPV+NI D+ +A F
Sbjct: 284 VVLGVPENALQPTHPVYNIGPDKVIQATMHF 314
Score = 75 (31.5 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 75 LLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWV 131
L+ +V ++ CQ+ EGG G PG H T+ + A+ +I EA D ++ + L+ ++
Sbjct: 21 LVPSVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYL 80
Query: 132 VFRQGVEGGF 141
+ +G F
Sbjct: 81 YSLKQPDGSF 90
Score = 50 (22.7 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 59 YTAISVASILNILDDELLQNVGN---YILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 114
YT +A+++ IL E N+ + ++ S Q +EGG G G Y+F +
Sbjct: 150 YTFCGLAALV-ILKKERCLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 208
Query: 115 LINEADRLDLDALIG---WVVFRQGVE 138
L++ A D + W+ +Q ++
Sbjct: 209 LLHRALHAQGDPALSMSRWMFHQQALQ 235
>ZFIN|ZDB-GENE-030131-2220 [details] [associations]
symbol:fntb "farnesyltransferase, CAAX box, beta"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 ZFIN:ZDB-GENE-030131-2220
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 CTD:2342
GeneTree:ENSGT00550000075042 HOVERGEN:HBG008173 OMA:HPVYNIC
OrthoDB:EOG4KKZ33 EMBL:AL928866 EMBL:BX255891 EMBL:BC071443
IPI:IPI00492729 RefSeq:NP_001002128.1 UniGene:Dr.77794 SMR:Q6IQG3
STRING:Q6IQG3 Ensembl:ENSDART00000038149 GeneID:323500
KEGG:dre:323500 InParanoid:Q6IQG3 NextBio:20808280 Uniprot:Q6IQG3
Length = 419
Score = 485 (175.8 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 94/165 (56%), Positives = 114/165 (69%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAI 62
HLA TYAAVNAL LG E++ INR + FL +K P G+F MH GE+DVR+ Y A
Sbjct: 134 HLAPTYAAVNALCILGTEEAYNVINRETLLDFLYSVKQPDGSFVMHIGGEVDVRSAYCAA 193
Query: 63 SVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRL 122
SVAS+ NI+ L N+I+SCQ +EGG+ G PG EAHGGYTFCG AA++++ + L
Sbjct: 194 SVASLTNIIAPTLFDGTHNWIISCQNWEGGLGGVPGLEAHGGYTFCGTAALVILGKEHML 253
Query: 123 DLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
DL AL+ WV RQ EGGFQGR NKLVDGCYSFWQ G+ LL R
Sbjct: 254 DLKALLRWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 298
Score = 219 (82.2 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 46/93 (49%), Positives = 57/93 (61%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+F ALQ Y+LLC Q+P GGL DK K RD+YHT YCLSGLS+ QH KD +
Sbjct: 314 MFERKALQEYILLCCQNPGGGLLDKPGKSRDFYHTSYCLSGLSVAQHFGNKDLHNE---- 369
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFSR 318
+LG N L P HPV+NI ++ A E+F R
Sbjct: 370 LILGRDENKLAPTHPVYNICPEKVARAVEYFHR 402
Score = 95 (38.5 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 35/157 (22%), Positives = 60/157 (38%)
Query: 20 EKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASIL------NILDD 73
E+ +P+ S V FL + P+G F + + Y A++ IL N+++
Sbjct: 100 EEPVPAAVASDVCQFLARCQAPTGGFGGGPGQQAHLAPTYAAVNALCILGTEEAYNVINR 159
Query: 74 ELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVF 133
E L + ++ S + +G G E +C + L N D W++
Sbjct: 160 ETLLD---FLYSVKQPDGSFVMHIGGEVDVRSAYCAASVASLTNIIAPTLFDGTHNWIIS 216
Query: 134 RQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
Q EGG G G Y+F +L + H +
Sbjct: 217 CQNWEGGLGGVPGLEAHGGYTFCGTAALVILGKEHML 253
Score = 85 (35.0 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 29/123 (23%), Positives = 59/123 (47%)
Query: 24 PSINRSKVYTFLKC-MKDPSGAFRMHDAGEIDVRACYTAISVASILNI-LDDELLQNVGN 81
P++ R + Y +LK ++ S A+ DA + CY + +L + + +V
Sbjct: 56 PALLREQHYHYLKKGLRHLSDAYECLDASRPWL--CYWILHSLELLEEPVPAAVASDVCQ 113
Query: 82 YILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN--EA-DRLDLDALIGWVVFRQGVE 138
++ CQ GG G PG +AH T+ + A+ ++ EA + ++ + L+ ++ + +
Sbjct: 114 FLARCQAPTGGFGGGPGQQAHLAPTYAAVNALCILGTEEAYNVINRETLLDFLYSVKQPD 173
Query: 139 GGF 141
G F
Sbjct: 174 GSF 176
Score = 45 (20.9 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 18/92 (19%), Positives = 42/92 (45%)
Query: 53 IDVRACYTAISVASILNILDDELL--QNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCG 109
++ YT A+++ + + +L + + ++ S Q +EGG G G Y+F
Sbjct: 230 LEAHGGYTFCGTAALVILGKEHMLDLKALLRWVTSRQMRFEGGFQGRCNKLVDGCYSFWQ 289
Query: 110 LAAMILINEADRLDLDALIG---WVVFRQGVE 138
+ L++ A + D+ + W+ R+ ++
Sbjct: 290 AGLLPLLHRALFKEGDSTLSVSSWMFERKALQ 321
>FB|FBgn0038424 [details] [associations]
symbol:CG17565 species:7227 "Drosophila melanogaster"
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISS] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISS] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0018343 "protein farnesylation" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 EMBL:AE014297
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343
eggNOG:COG5029 GO:GO:0005965 GO:GO:0004663 KO:K05954
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:HPVYNIC
EMBL:AY051869 RefSeq:NP_650540.1 UniGene:Dm.4459 HSSP:Q02293
SMR:Q9VEV7 STRING:Q9VEV7 EnsemblMetazoa:FBtr0083286 GeneID:41989
KEGG:dme:Dmel_CG17565 UCSC:CG17565-RA FlyBase:FBgn0038424
InParanoid:Q9VEV7 OrthoDB:EOG4NP5JX GenomeRNAi:41989 NextBio:826605
Uniprot:Q9VEV7
Length = 419
Score = 461 (167.3 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
Identities = 89/165 (53%), Positives = 112/165 (67%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAI 62
HLA TYAAVN+L +G E++ +I+R + FL ++D G+FR+H GE DVR Y AI
Sbjct: 136 HLAPTYAAVNSLCIIGSEQAYRAIDRPTLVQFLFSVRDSDGSFRLHVDGETDVRGAYCAI 195
Query: 63 SVASILNILDD---ELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEA 119
S A +LN+ + EL G++I CQTYEGG G PG EAHGGYTFCG+A + L+NEA
Sbjct: 196 SCAKLLNLPEPVIKELFAGTGDWIAQCQTYEGGFGGAPGLEAHGGYTFCGIAGLALLNEA 255
Query: 120 DRLDLDALIGWVVFRQGV-EGGFQGRTNKLVDGCYSFWQGGVFAL 163
D+ D AL+ W + RQ EGGFQGRTNKLVDGCYSFW G +
Sbjct: 256 DKCDRQALLKWTLRRQMTYEGGFQGRTNKLVDGCYSFWVGATIPI 300
Score = 199 (75.1 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
Identities = 49/94 (52%), Positives = 54/94 (57%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
LF ALQ Y+LLC Q GGL DK KP+D YHTCY LSG+SI QHS + SSP
Sbjct: 316 LFDVEALQEYILLCCQKQSGGLIDKPGKPQDLYHTCYTLSGVSIAQHS---ECASSP--- 369
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFSRS 319
VLG N L P HP+FNI A FS S
Sbjct: 370 QVLGDTINELLPTHPLFNIPPKSVAAARSHFSNS 403
Score = 93 (37.8 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 59 YTAISVASILNI-LDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN 117
Y + A +L+ DD+ L +V ++ +C++ GG G PG AH T+ + ++ +I
Sbjct: 92 YWILQAAQLLSFNFDDQTLNHVVQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCIIG 151
Query: 118 --EADR-LDLDALIGWVVFRQGVEGGFQ----GRTNKLVDGCY 153
+A R +D L+ ++ + +G F+ G T+ V G Y
Sbjct: 152 SEQAYRAIDRPTLVQFLFSVRDSDGSFRLHVDGETD--VRGAY 192
Score = 63 (27.2 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 29/142 (20%), Positives = 52/142 (36%)
Query: 31 VYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGN-----YILS 85
V FL + P+G F + Y A++ I+ ++ + + ++ S
Sbjct: 113 VVQFLSNCRSPTGGFGGGPGQYAHLAPTYAAVNSLCIIG--SEQAYRAIDRPTLVQFLFS 170
Query: 86 CQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIG---WVVFRQGVEGGFQ 142
+ +G E +C ++ L+N + + + G W+ Q EGGF
Sbjct: 171 VRDSDGSFRLHVDGETDVRGAYCAISCAKLLNLPEPVIKELFAGTGDWIAQCQTYEGGFG 230
Query: 143 GRTNKLVDGCYSFWQGGVFALL 164
G G Y+F ALL
Sbjct: 231 GAPGLEAHGGYTFCGIAGLALL 252
>WB|WBGene00006465 [details] [associations]
symbol:fntb-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 GO:GO:0009792 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343
eggNOG:COG5029 EMBL:Z77659 GO:GO:0005965 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042
OMA:HPVYNIC HSSP:P49356 PIR:T21291 RefSeq:NP_506580.1
ProteinModelPortal:Q19752 IntAct:Q19752 STRING:Q19752 PaxDb:Q19752
EnsemblMetazoa:F23B12.6.1 EnsemblMetazoa:F23B12.6.2
EnsemblMetazoa:F23B12.6.3 GeneID:179946 KEGG:cel:CELE_F23B12.6
UCSC:F23B12.6.1 CTD:179946 WormBase:F23B12.6 InParanoid:Q19752
NextBio:907502 Uniprot:Q19752
Length = 401
Score = 472 (171.2 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 88/165 (53%), Positives = 116/165 (70%)
Query: 1 MPHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYT 60
+ HLA TYAAV L+SL E++L SINR ++ FLK K SG F MH+ GEID+R+ Y
Sbjct: 135 LAHLAPTYAAVMCLVSLQKEEALRSINRVTLFNFLKKCKHESGGFYMHEGGEIDMRSAYC 194
Query: 61 AISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEAD 120
A++ I+ + DE+ V +I+SCQ++EGG GEP +EAHGGYTFC +A+++L+N
Sbjct: 195 ALATCEIVGLPMDEISNGVAEWIISCQSFEGGFGGEPYTEAHGGYTFCAVASLVLLNRFR 254
Query: 121 RLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALL 164
D++ L+ W RQ EGGFQGRTNKLVDGCYSFWQG +F LL
Sbjct: 255 LADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSFWQGAIFPLL 299
Score = 163 (62.4 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQ-HSWLKDEDSSPLP 284
LF + L+ Y+L+ Q GG +DK KP D YHTCY LSGLS+ Q +S +D
Sbjct: 314 LFEARMLEEYILVGCQSVHGGFKDKPDKPVDLYHTCYVLSGLSVAQKYSLARDGK----- 368
Query: 285 RAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFS 317
+LG N+L ++PVFN+ + A EFF+
Sbjct: 369 --ILGGDVNMLAEINPVFNVTIASEQFAKEFFT 399
Score = 128 (50.1 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 42/166 (25%), Positives = 70/166 (42%)
Query: 8 YAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASI 67
Y VNAL L E +P+ + FLK + P G + G++ T +V +
Sbjct: 93 YWGVNALKILDAE--IPNDVIENIIVFLKSCEHPEGGYG-GGPGQL-AHLAPTYAAVMCL 148
Query: 68 LNILDDELLQNVG-----NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN-EADR 121
+++ +E L+++ N++ C+ GG G E +C LA ++ D
Sbjct: 149 VSLQKEEALRSINRVTLFNFLKKCKHESGGFYMHEGGEIDMRSAYCALATCEIVGLPMDE 208
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
+ + + W++ Q EGGF G G Y+F LL RF
Sbjct: 209 IS-NGVAEWIISCQSFEGGFGGEPYTEAHGGYTFCAVASLVLLNRF 253
>UNIPROTKB|Q19752 [details] [associations]
symbol:fntb-1 "Protein FNTB-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 GO:GO:0009792
GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 EMBL:Z77659 GO:GO:0005965
HOGENOM:HOG000190594 KO:K05954 PANTHER:PTHR11774:SF6
GeneTree:ENSGT00550000075042 OMA:HPVYNIC HSSP:P49356 PIR:T21291
RefSeq:NP_506580.1 ProteinModelPortal:Q19752 IntAct:Q19752
STRING:Q19752 PaxDb:Q19752 EnsemblMetazoa:F23B12.6.1
EnsemblMetazoa:F23B12.6.2 EnsemblMetazoa:F23B12.6.3 GeneID:179946
KEGG:cel:CELE_F23B12.6 UCSC:F23B12.6.1 CTD:179946 WormBase:F23B12.6
InParanoid:Q19752 NextBio:907502 Uniprot:Q19752
Length = 401
Score = 472 (171.2 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 88/165 (53%), Positives = 116/165 (70%)
Query: 1 MPHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYT 60
+ HLA TYAAV L+SL E++L SINR ++ FLK K SG F MH+ GEID+R+ Y
Sbjct: 135 LAHLAPTYAAVMCLVSLQKEEALRSINRVTLFNFLKKCKHESGGFYMHEGGEIDMRSAYC 194
Query: 61 AISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEAD 120
A++ I+ + DE+ V +I+SCQ++EGG GEP +EAHGGYTFC +A+++L+N
Sbjct: 195 ALATCEIVGLPMDEISNGVAEWIISCQSFEGGFGGEPYTEAHGGYTFCAVASLVLLNRFR 254
Query: 121 RLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALL 164
D++ L+ W RQ EGGFQGRTNKLVDGCYSFWQG +F LL
Sbjct: 255 LADMEGLLRWATRRQMRFEGGFQGRTNKLVDGCYSFWQGAIFPLL 299
Score = 163 (62.4 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQ-HSWLKDEDSSPLP 284
LF + L+ Y+L+ Q GG +DK KP D YHTCY LSGLS+ Q +S +D
Sbjct: 314 LFEARMLEEYILVGCQSVHGGFKDKPDKPVDLYHTCYVLSGLSVAQKYSLARDGK----- 368
Query: 285 RAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFS 317
+LG N+L ++PVFN+ + A EFF+
Sbjct: 369 --ILGGDVNMLAEINPVFNVTIASEQFAKEFFT 399
Score = 128 (50.1 bits), Expect = 5.8e-19, Sum P(2) = 5.8e-19
Identities = 42/166 (25%), Positives = 70/166 (42%)
Query: 8 YAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASI 67
Y VNAL L E +P+ + FLK + P G + G++ T +V +
Sbjct: 93 YWGVNALKILDAE--IPNDVIENIIVFLKSCEHPEGGYG-GGPGQL-AHLAPTYAAVMCL 148
Query: 68 LNILDDELLQNVG-----NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN-EADR 121
+++ +E L+++ N++ C+ GG G E +C LA ++ D
Sbjct: 149 VSLQKEEALRSINRVTLFNFLKKCKHESGGFYMHEGGEIDMRSAYCALATCEIVGLPMDE 208
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
+ + + W++ Q EGGF G G Y+F LL RF
Sbjct: 209 IS-NGVAEWIISCQSFEGGFGGEPYTEAHGGYTFCAVASLVLLNRF 253
>DICTYBASE|DDB_G0270948 [details] [associations]
symbol:fntB "protein farnesyltransferase beta
subunit" species:44689 "Dictyostelium discoideum" [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=IEA;ISS] [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA;ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
dictyBase:DDB_G0270948 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 GO:GO:0004660 KO:K05954
OMA:QDASQPW PANTHER:PTHR11774:SF6 RefSeq:XP_646280.1 HSSP:P49356
ProteinModelPortal:Q55D51 EnsemblProtists:DDB0237553 GeneID:8617235
KEGG:ddi:DDB_G0270948 Uniprot:Q55D51
Length = 500
Score = 459 (166.6 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 83/165 (50%), Positives = 118/165 (71%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAI 62
H+ +T+AAV+AL +G E+S +I+R +Y FL MK GAF D GE D R Y AI
Sbjct: 147 HVVSTFAAVSALYVIGTEESYKTIDREAMYKFLMRMKTKEGAFTSEDGGEYDSRTTYCAI 206
Query: 63 SVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRL 122
+VAS+LNIL EL + V +++LSCQTYEGG P +EAHGGYTFC +AA+ ++N ++
Sbjct: 207 AVASMLNILTAELERGVVDFLLSCQTYEGGFGAYPFNEAHGGYTFCSVAALSILNSLHKI 266
Query: 123 DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
D+++L W+ +RQ +GGF+GRTNKLVD CYS+WQG V+ +++ +
Sbjct: 267 DMNSLHRWITYRQSNDGGFEGRTNKLVDTCYSYWQGAVYIIIQSY 311
Score = 110 (43.8 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 28/86 (32%), Positives = 42/86 (48%)
Query: 221 REREPLFHSIALQRYLL-LCSQDPR--GGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKD 277
+E LF+ LQ Y++ C Q + G D + +DYYHTCY LSG+S+ Q++ +
Sbjct: 331 QEEGLLFNQAKLQEYVIRFCQQSDKKYSGFSDHPHRGKDYYHTCYGLSGISLSQYNEIGK 390
Query: 278 EDSSPLPRAVLGPYSNVLEPVHPVFN 303
S L ++N E P N
Sbjct: 391 AIQS------LNTFTNTFEQPSPPIN 410
Score = 87 (35.7 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 28/117 (23%), Positives = 48/117 (41%)
Query: 55 VRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMI 114
V A Y I +D E + +++ +T EG E G E T+C +A
Sbjct: 155 VSALYV-IGTEESYKTIDREAMYK---FLMRMKTKEGAFTSEDGGEYDSRTTYCAIAVAS 210
Query: 115 LINEADRLDLD-ALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
++N +L+ ++ +++ Q EGGF G Y+F ++L H I
Sbjct: 211 MLNILTA-ELERGVVDFLLSCQTYEGGFGAYPFNEAHGGYTFCSVAALSILNSLHKI 266
Score = 57 (25.1 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 292 SNVLEPVHPVFNIVLDRYHEAHE 314
+ ++EPVHP++NI L + + E
Sbjct: 449 NQLVEPVHPIYNIKLSKCEKGFE 471
Score = 46 (21.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 91 GGIAGEPGSEAHGGYTFCGLAAMILINEADR---LDLDALIGWVVFRQGVEGGF 141
GG G +H TF ++A+ +I + +D +A+ +++ + EG F
Sbjct: 136 GGFGGGNSHTSHVVSTFAAVSALYVIGTEESYKTIDREAMYKFLMRMKTKEGAF 189
>GENEDB_PFALCIPARUM|PF11_0483 [details] [associations]
symbol:PF11_0483 "farnesyltransferase beta
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0004660 "protein
farnesyltransferase activity" evidence=ISS] InterPro:IPR026872
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 EMBL:AE014186 GO:GO:0005965 GO:GO:0004660 KO:K05954
PANTHER:PTHR11774:SF6 RefSeq:XP_001348150.2
ProteinModelPortal:Q8IHP6 EnsemblProtists:PF11_0483:mRNA
GeneID:811026 KEGG:pfa:PF11_0483 EuPathDB:PlasmoDB:PF3D7_1147500
HOGENOM:HOG000282555 ProtClustDB:CLSZ2433480 ChEMBL:CHEMBL3645
Uniprot:Q8IHP6
Length = 923
Score = 399 (145.5 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 74/165 (44%), Positives = 112/165 (67%)
Query: 3 HLATTYAAVNALISLGGEKS--LPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYT 60
H+ATTYAAV I L E++ L +++ K+++++ +K G+FR+H GEID+R Y
Sbjct: 509 HIATTYAAVCVFIYLHDEENNFLSFLDKKKLHSYILKLKCTDGSFRVHINGEIDMRGTYC 568
Query: 61 AISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEAD 120
AIS+ S+ +IL +E+ +NV YIL+CQ YEGG E E HGGY++C LA + ++ + +
Sbjct: 569 AISICSMCHILTNEVKKNVEKYILTCQNYEGGFTSEKFQECHGGYSYCALATLCILGKVN 628
Query: 121 RLDLDALIGWVVFRQG-VEGGFQGRTNKLVDGCYSFWQGGVFALL 164
+++L L W++ +Q +EG F GRTNKLVD CYSFW G +F L+
Sbjct: 629 KINLKNLTHWLMNKQSNIEGAFMGRTNKLVDSCYSFWMGSIFFLI 673
Score = 181 (68.8 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 37/101 (36%), Positives = 65/101 (64%)
Query: 219 QHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQH--SWLK 276
++ ++ LF+ L+ YL LCSQ+ +GG++DK ++ DYYHTCY LSGLS+ Q+ S L
Sbjct: 798 EYIQKNVLFNENFLKLYLYLCSQNSKGGMKDKPKERIDYYHTCYALSGLSLVQNHLSSLD 857
Query: 277 DEDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFS 317
++ + + Y+N L +H ++NI +D+ + ++ +FS
Sbjct: 858 KKNFKDIQNKDI--YNN-LNKIHILYNITVDKVYNSYNYFS 895
Score = 62 (26.9 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 32/149 (21%), Positives = 62/149 (41%)
Query: 31 VYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELL-----QNVGNYILS 85
V+ +L +K+ G F + Y A+ V L+ ++ L + + +YIL
Sbjct: 486 VFLYLNKIKNNDGGFGGGLNQYTHIATTYAAVCVFIYLHDEENNFLSFLDKKKLHSYILK 545
Query: 86 CQTYEGGIAGEPGSEAHGGYTFCGLA--AM--ILINEADRLDLDALIGWVVFRQGVEGGF 141
+ +G E T+C ++ +M IL NE + +++ +++ Q EGGF
Sbjct: 546 LKCTDGSFRVHINGEIDMRGTYCAISICSMCHILTNEVKK-NVEK---YILTCQNYEGGF 601
Query: 142 QGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+ G YS+ +L + + I
Sbjct: 602 TSEKFQECHGGYSYCALATLCILGKVNKI 630
>UNIPROTKB|Q8IHP6 [details] [associations]
symbol:PF11_0483 "Farnesyltransferase beta subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004660
"protein farnesyltransferase activity" evidence=ISS] [GO:0005965
"protein farnesyltransferase complex" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=ISS] InterPro:IPR026872
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008270 GO:GO:0042127
GO:GO:0018343 EMBL:AE014186 GO:GO:0005965 GO:GO:0004660 KO:K05954
PANTHER:PTHR11774:SF6 RefSeq:XP_001348150.2
ProteinModelPortal:Q8IHP6 EnsemblProtists:PF11_0483:mRNA
GeneID:811026 KEGG:pfa:PF11_0483 EuPathDB:PlasmoDB:PF3D7_1147500
HOGENOM:HOG000282555 ProtClustDB:CLSZ2433480 ChEMBL:CHEMBL3645
Uniprot:Q8IHP6
Length = 923
Score = 399 (145.5 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 74/165 (44%), Positives = 112/165 (67%)
Query: 3 HLATTYAAVNALISLGGEKS--LPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYT 60
H+ATTYAAV I L E++ L +++ K+++++ +K G+FR+H GEID+R Y
Sbjct: 509 HIATTYAAVCVFIYLHDEENNFLSFLDKKKLHSYILKLKCTDGSFRVHINGEIDMRGTYC 568
Query: 61 AISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEAD 120
AIS+ S+ +IL +E+ +NV YIL+CQ YEGG E E HGGY++C LA + ++ + +
Sbjct: 569 AISICSMCHILTNEVKKNVEKYILTCQNYEGGFTSEKFQECHGGYSYCALATLCILGKVN 628
Query: 121 RLDLDALIGWVVFRQG-VEGGFQGRTNKLVDGCYSFWQGGVFALL 164
+++L L W++ +Q +EG F GRTNKLVD CYSFW G +F L+
Sbjct: 629 KINLKNLTHWLMNKQSNIEGAFMGRTNKLVDSCYSFWMGSIFFLI 673
Score = 181 (68.8 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 37/101 (36%), Positives = 65/101 (64%)
Query: 219 QHREREPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQH--SWLK 276
++ ++ LF+ L+ YL LCSQ+ +GG++DK ++ DYYHTCY LSGLS+ Q+ S L
Sbjct: 798 EYIQKNVLFNENFLKLYLYLCSQNSKGGMKDKPKERIDYYHTCYALSGLSLVQNHLSSLD 857
Query: 277 DEDSSPLPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFFS 317
++ + + Y+N L +H ++NI +D+ + ++ +FS
Sbjct: 858 KKNFKDIQNKDI--YNN-LNKIHILYNITVDKVYNSYNYFS 895
Score = 62 (26.9 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 32/149 (21%), Positives = 62/149 (41%)
Query: 31 VYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELL-----QNVGNYILS 85
V+ +L +K+ G F + Y A+ V L+ ++ L + + +YIL
Sbjct: 486 VFLYLNKIKNNDGGFGGGLNQYTHIATTYAAVCVFIYLHDEENNFLSFLDKKKLHSYILK 545
Query: 86 CQTYEGGIAGEPGSEAHGGYTFCGLA--AM--ILINEADRLDLDALIGWVVFRQGVEGGF 141
+ +G E T+C ++ +M IL NE + +++ +++ Q EGGF
Sbjct: 546 LKCTDGSFRVHINGEIDMRGTYCAISICSMCHILTNEVKK-NVEK---YILTCQNYEGGF 601
Query: 142 QGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+ G YS+ +L + + I
Sbjct: 602 TSEKFQECHGGYSYCALATLCILGKVNKI 630
>SGD|S000002248 [details] [associations]
symbol:RAM1 "Beta subunit of the CAAX farnesyltransferase
(FTase)" species:4932 "Saccharomyces cerevisiae" [GO:0005965
"protein farnesyltransferase complex" evidence=IEA;IDA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0018343
"protein farnesylation" evidence=IEA;IDA] [GO:0004660 "protein
farnesyltransferase activity" evidence=IEA;IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 SGD:S000002248
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 EMBL:BK006938
GO:GO:0042127 GO:GO:0018343 EMBL:X95644 eggNOG:COG5029
GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594 KO:K05954
PANTHER:PTHR11774:SF6 GeneTree:ENSGT00550000075042 OMA:YWIANSL
OrthoDB:EOG4ZPJ4B EMBL:M22753 EMBL:Z74138 EMBL:AY692971 PIR:S67626
RefSeq:NP_010193.1 ProteinModelPortal:P22007 SMR:P22007
DIP:DIP-1556N IntAct:P22007 MINT:MINT-396276 STRING:P22007
PaxDb:P22007 EnsemblFungi:YDL090C GeneID:851468 KEGG:sce:YDL090C
CYGD:YDL090c BindingDB:P22007 ChEMBL:CHEMBL4122 NextBio:968756
Genevestigator:P22007 GermOnline:YDL090C Uniprot:P22007
Length = 431
Score = 391 (142.7 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 78/171 (45%), Positives = 111/171 (64%)
Query: 1 MPHLATTYAAVNALISLGG-EKSLPSINRSKVYTFLKCMKDPSGAFRMH-DAGEIDVRAC 58
+ HLA+TYAA+NAL + I+R +Y +L +K+P+G F+ + GE+D R
Sbjct: 154 LSHLASTYAAINALSLCDNIDGCWDRIDRKGIYQWLISLKEPNGGFKTCLEVGEVDTRGI 213
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPG-SEAHGGYTFCGLAAMILIN 117
Y A+S+A++LNIL +EL + V NY+ +CQ YEGG P EAHGGYTFC A++ ++
Sbjct: 214 YCALSIATLLNILTEELTEGVLNYLKNCQNYEGGFGSCPHVDEAHGGYTFCATASLAILR 273
Query: 118 EADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
D+++++ L+ W RQ E GF GR+NKLVDGCYSFW GG A+L F
Sbjct: 274 SMDQINVEKLLEWSSARQLQEERGFCGRSNKLVDGCYSFWVGGSAAILEAF 324
Score = 131 (51.2 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
Identities = 32/96 (33%), Positives = 53/96 (55%)
Query: 227 FHSIALQRYLLLCSQDP-RGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSP--- 282
F+ AL+ Y+L C Q+ + GLRDK D+YHT YCL GL++ + S+ + SP
Sbjct: 330 FNKHALRDYILYCCQEKEQPGLRDKPGAHSDFYHTNYCLLGLAVAESSYSCTPNDSPHNI 389
Query: 283 --LPRAVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
P ++G S+ L V+PV+ + ++ + +F
Sbjct: 390 KCTPDRLIG--SSKLTDVNPVYGLPIENVRKIIHYF 423
Score = 69 (29.3 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 17/76 (22%), Positives = 34/76 (44%)
Query: 71 LDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEAD----RLDLDA 126
L D+ + + + + + G G PG +H T+ + A+ L + D R+D
Sbjct: 125 LSDDTKRKIVDKLFTISPSGGPFGGGPGQLSHLASTYAAINALSLCDNIDGCWDRIDRKG 184
Query: 127 LIGWVVFRQGVEGGFQ 142
+ W++ + GGF+
Sbjct: 185 IYQWLISLKEPNGGFK 200
>POMBASE|SPAC17G6.04c [details] [associations]
symbol:cpp1 "protein farnesyltransferase beta subunit
Cpp1" species:4896 "Schizosaccharomyces pombe" [GO:0004660 "protein
farnesyltransferase activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005965 "protein farnesyltransferase complex" evidence=IEA]
[GO:0006612 "protein targeting to membrane" evidence=IC]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IGI] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0010958 "regulation of amino acid import" evidence=IGI]
[GO:0018343 "protein farnesylation" evidence=IMP;IDA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026872 Pfam:PF00432 PomBase:SPAC17G6.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612
GO:GO:0008270 GO:GO:0042127 GO:GO:0018343 GO:GO:0006995
eggNOG:COG5029 GO:GO:0005965 GO:GO:0004660 HOGENOM:HOG000190594
KO:K05954 PANTHER:PTHR11774:SF6 OMA:HPVYNIC PIR:T37836
RefSeq:NP_594251.1 ProteinModelPortal:O13782 STRING:O13782
EnsemblFungi:SPAC17G6.04c.1 GeneID:2542380 KEGG:spo:SPAC17G6.04c
OrthoDB:EOG4ZPJ4B NextBio:20803439 GO:GO:0010958 Uniprot:O13782
Length = 382
Score = 362 (132.5 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 70/158 (44%), Positives = 103/158 (65%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAI 62
HL +TYA++ ++ + I R ++Y +L +K+P G+FR+++ GE D R+ Y A+
Sbjct: 104 HLLSTYASILSICLCDSTDAYSLIERDRLYDWLFSLKNPDGSFRVNNEGESDARSVYAAV 163
Query: 63 SVASILNI-LDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
V+S++ I +DD L + ++ CQTYEGG++G P +EAHGGYTFC LAA+ L+ D
Sbjct: 164 CVSSLVGISMDDPLFEGTLQWLCKCQTYEGGLSGVPYAEAHGGYTFCALAAIALLGGLDN 223
Query: 122 LDLDALIGWVVFRQGVE-GGFQGRTNKLVDGCYSFWQG 158
L+ L W+V RQ GF GR+NKLVDGCYS+W G
Sbjct: 224 LNEIKLSTWLVQRQDPALYGFSGRSNKLVDGCYSWWVG 261
Score = 136 (52.9 bits), Expect = 7.6e-46, Sum P(2) = 7.6e-46
Identities = 32/85 (37%), Positives = 43/85 (50%)
Query: 220 HREREPLFHSIA-LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSW-LKD 277
H+ LF++ L Y+L C Q GGLRDK K D YHTCYCL GLS + +
Sbjct: 276 HKSLPNLFYNPEKLLGYILQCCQSTSGGLRDKPPKRPDQYHTCYCLLGLSSIAYDYRYHT 335
Query: 278 EDSSPLPRAVLGPYSNVLEPVHPVF 302
D ++L + L P HP++
Sbjct: 336 SDGWSYKPSILHSSLSSLLPAHPIY 360
Score = 90 (36.7 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 35/137 (25%), Positives = 55/137 (40%)
Query: 10 AVNALISLGGEKSLPSINRSKVYTFLKCMKDP-SGAFRMHDAGEIDVRACYTAISVASIL 68
A L L GE S N K +L M DP F + DA + Y +S +IL
Sbjct: 15 ATAVLPLLNGESQ--SFNLQKHLKYLTKMLDPLPSPFTVLDASRAWM--VYWELSSLAIL 70
Query: 69 NILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDL---D 125
LD + + + + + GG G G + H T+ + ++ L + D L D
Sbjct: 71 GKLDSSVCERAISSVRQLKGPSGGFCGGNGQDEHLLSTYASILSICLCDSTDAYSLIERD 130
Query: 126 ALIGWVVFRQGVEGGFQ 142
L W+ + +G F+
Sbjct: 131 RLYDWLFSLKNPDGSFR 147
Score = 74 (31.1 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 36/162 (22%), Positives = 71/162 (43%)
Query: 8 YAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASI 67
Y +++L LG L S + + ++ +K PSG F + + + + Y +I +
Sbjct: 61 YWELSSLAILG---KLDSSVCERAISSVRQLKGPSGGFCGGNGQDEHLLSTYASILSICL 117
Query: 68 LNILDD-ELLQN--VGNYILSCQTYEGG--IAGEPGSEAHGGYTFCGLAAMILINEADRL 122
+ D L++ + +++ S + +G + E S+A Y +++++ I+ D L
Sbjct: 118 CDSTDAYSLIERDRLYDWLFSLKNPDGSFRVNNEGESDARSVYAAVCVSSLVGISMDDPL 177
Query: 123 DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALL 164
+ + W+ Q EGG G G Y+F ALL
Sbjct: 178 -FEGTLQWLCKCQTYEGGLSGVPYAEAHGGYTFCALAAIALL 218
>ASPGD|ASPL0000050108 [details] [associations]
symbol:AN2002 species:162425 "Emericella nidulans"
[GO:0004660 "protein farnesyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0010958 "regulation of amino acid
import" evidence=IEA] [GO:0018343 "protein farnesylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 EMBL:BN001307
GO:GO:0042127 GO:GO:0018343 GO:GO:0005965 HOGENOM:HOG000190594
PANTHER:PTHR11774:SF6 ProteinModelPortal:C8VLC9
EnsemblFungi:CADANIAT00008669 OMA:CEGGEED Uniprot:C8VLC9
Length = 519
Score = 344 (126.2 bits), Expect = 9.9e-43, Sum P(2) = 9.9e-43
Identities = 74/182 (40%), Positives = 106/182 (58%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAI 62
H A++YAAV +L +GGE++ I+R ++ +L +K P G + + GE DVR Y A+
Sbjct: 197 HCASSYAAVLSLAMVGGEEAFNLIDRQAMWKWLGKLKQPDGGITVCEGGEEDVRGAYCAM 256
Query: 63 SVASILNI---LDDE----------LLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCG 109
+ S+LN+ L E + Y+ CQT+EGGI+G PGSEAHG Y FC
Sbjct: 257 VIISLLNLPLTLPPEAKAREYGLETFTDGLWEYLSRCQTFEGGISGSPGSEAHGAYAFCA 316
Query: 110 LAAMILINEADR-----LDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGVFAL 163
LA + ++ E + +D+ L+ W+ RQ EGGF GRTNKLVDGCYS W G + L
Sbjct: 317 LACLCILGEPEATIPKCMDVQMLLSWLSARQYAPEGGFAGRTNKLVDGCYSHWVGSCWPL 376
Query: 164 LR 165
++
Sbjct: 377 IQ 378
Score = 128 (50.1 bits), Expect = 9.9e-43, Sum P(2) = 9.9e-43
Identities = 29/59 (49%), Positives = 35/59 (59%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLP 284
L+ L RY+L C Q GGLRDK K D YHTCY L+GLS QH + +SS +P
Sbjct: 397 LYSREGLTRYILGCCQSKNGGLRDKPGKHPDSYHTCYTLTGLSSVQH-YHYHTNSSVVP 454
Score = 49 (22.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 34/146 (23%), Positives = 62/146 (42%)
Query: 1 MPHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKC--MKD-PSGAFRMHDAGEIDVRA 57
+P LA +++ ++ G +PS+ R +L C ++D P G M DA +
Sbjct: 100 LPFLAGAHSSQKGPLNRHG---VPSLMRDVHIGYL-CDSLEDYPPGFVAM-DASRPWM-- 152
Query: 58 CYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN 117
Y A++ S+L + I Q GG G G +H ++ + ++ ++
Sbjct: 153 IYWALAALSLLGEDLSRHRERAIATITPMQNPTGGFGGGHGQISHCASSYAAVLSLAMVG 212
Query: 118 --EADRL-DLDALIGWVVFRQGVEGG 140
EA L D A+ W+ + +GG
Sbjct: 213 GEEAFNLIDRQAMWKWLGKLKQPDGG 238
Score = 37 (18.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 16/66 (24%), Positives = 24/66 (36%)
Query: 78 NVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGV 137
++G S + Y G S + LAA+ L+ E + I + Q
Sbjct: 127 HIGYLCDSLEDYPPGFVAMDASRPW--MIYWALAALSLLGEDLSRHRERAIATITPMQNP 184
Query: 138 EGGFQG 143
GGF G
Sbjct: 185 TGGFGG 190
>UNIPROTKB|B3KSC2 [details] [associations]
symbol:CHURC1-FNTB "cDNA FLJ35979 fis, clone TESTI2013545,
highly similar to Protein farnesyltransferase subunit beta (EC
2.5.1.58)" species:9606 "Homo sapiens" [GO:0005965 "protein
farnesyltransferase complex" evidence=IEA] [GO:0018343 "protein
farnesylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432
GO:GO:0008285 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008144
GO:GO:0008270 GO:GO:0034097 GO:GO:0014070 GO:GO:0042277
GO:GO:0010035 GO:GO:0042060 GO:GO:0018343 GO:GO:0048146
GO:GO:0045787 GO:GO:0004311 GO:GO:0005965 GO:GO:0004660
GO:GO:0019840 PANTHER:PTHR11774:SF6 UniGene:Hs.325531 EMBL:AL139022
EMBL:AL135745 EMBL:AK093298 IPI:IPI01011588 SMR:B3KSC2
STRING:B3KSC2 Ensembl:ENST00000448390 UCSC:uc001xid.3
HGNC:HGNC:42960 HOVERGEN:HBG102605 Uniprot:B3KSC2
Length = 193
Score = 233 (87.1 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 43/68 (63%), Positives = 51/68 (75%)
Query: 100 EAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQG 158
EAHGGYTFCGLAA++++ L+L +L+ WV RQ EGGFQGR NKLVDGCYSFWQ
Sbjct: 2 EAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQA 61
Query: 159 GVFALLRR 166
G+ LL R
Sbjct: 62 GLLPLLHR 69
Score = 229 (85.7 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 47/91 (51%), Positives = 57/91 (62%)
Query: 226 LFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPR 285
+FH ALQ Y+L+C Q P GGL DK K RD+YHTCYCLSGLSI QH + L
Sbjct: 85 MFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG----SGAMLHD 140
Query: 286 AVLGPYSNVLEPVHPVFNIVLDRYHEAHEFF 316
VLG N L+P HPV+NI D+ +A +F
Sbjct: 141 VVLGVPENALQPTHPVYNIGPDKVIQATTYF 171
Score = 49 (22.3 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 59 YTAISVASILNILDDEL---LQNVGNYILSCQT-YEGGIAGEPGSEAHGGYTFCGLAAMI 114
YT +A+++ IL E L+++ ++ S Q +EGG G G Y+F +
Sbjct: 7 YTFCGLAALV-ILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLP 65
Query: 115 LINEADRLDLDALIG---WVVFRQGVE 138
L++ A D + W+ +Q ++
Sbjct: 66 LLHRALHAQGDPALSMSHWMFHQQALQ 92
>CGD|CAL0001670 [details] [associations]
symbol:RAM1 species:5476 "Candida albicans" [GO:0018342
"protein prenylation" evidence=NAS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005965 "protein farnesyltransferase complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0010958
"regulation of amino acid import" evidence=IEA] [GO:0006995
"cellular response to nitrogen starvation" evidence=IEA]
[GO:0018343 "protein farnesylation" evidence=IEA] [GO:0004660
"protein farnesyltransferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026872 Pfam:PF00432 CGD:CAL0001670
GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0042127
GO:GO:0018343 eggNOG:COG5029 GO:GO:0005965 GO:GO:0018342
PANTHER:PTHR11774:SF6 EMBL:AACQ01000259 RefSeq:XP_710548.1
ProteinModelPortal:Q59LD0 STRING:Q59LD0 GeneID:3647859
KEGG:cal:CaO19.5046 Uniprot:Q59LD0
Length = 583
Score = 215 (80.7 bits), Expect = 5.4e-40, Sum P(3) = 5.4e-40
Identities = 52/131 (39%), Positives = 75/131 (57%)
Query: 3 HLATTYAAVNALISLGGEKSLPSIN---RSKVYTFLKCMKDPSGA-FRMHDAGEIDVRAC 58
HLA+TYAA+ LI + L ++ R + T K SGA F MH+ GE+D R+
Sbjct: 252 HLASTYAAILTLILTDQYELLDNLRELIRDWLLTLKKRSSCGSGASFIMHENGEMDARST 311
Query: 59 YTAISVASILNILD-----------DELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTF 107
Y A+ + ++LN+ + D L+ V N++ SCQTYEGG + P +EAHGGYT+
Sbjct: 312 YCALIIINLLNLTNYEENSSSPEELDPLIDGVENWLNSCQTYEGGFSNIPNTEAHGGYTY 371
Query: 108 CGLAAMILINE 118
C LA+ L+ E
Sbjct: 372 CALASYFLLYE 382
Score = 152 (58.6 bits), Expect = 5.4e-40, Sum P(3) = 5.4e-40
Identities = 40/112 (35%), Positives = 60/112 (53%)
Query: 219 QHRERE-PLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWL-- 275
Q +++E +F L++YLL+ +QD GG +DK K DYYHT Y LSGLSI +HS+
Sbjct: 456 QGQQQEVKVFDEEKLRQYLLIIAQDESGGFKDKPGKQVDYYHTNYSLSGLSILEHSYKFS 515
Query: 276 KDEDSSPLPRAV--------LGPY---SNVLEPVHPVFNIVLDRYHEAHEFF 316
+D++ L + G N P+HPVF I + + H++F
Sbjct: 516 QDDEGRSLAFQIDVEREEEERGGGRGGDNFTNPIHPVFGIPIKFVKKCHDYF 567
Score = 138 (53.6 bits), Expect = 5.4e-40, Sum P(3) = 5.4e-40
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 122 LDLDALIGWVVFRQG-VEGGFQGRTNKLVDGCYSFWQGGVFALLR 165
+D + L+ W V RQ ++GG GRTNKLVD CY FW GG+F+LL+
Sbjct: 402 IDWEKLLEWSVHRQHELKGGVDGRTNKLVDACYGFWMGGLFSLLQ 446
Score = 55 (24.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 23/82 (28%), Positives = 33/82 (40%)
Query: 85 SCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN---------EADRLD--LDALIGWVVF 133
SC + I E G E T+C L + L+N + LD +D + W+
Sbjct: 291 SCGSGASFIMHENG-EMDARSTYCALIIINLLNLTNYEENSSSPEELDPLIDGVENWLNS 349
Query: 134 RQGVEGGFQGRTNKLVDGCYSF 155
Q EGGF N G Y++
Sbjct: 350 CQTYEGGFSNIPNTEAHGGYTY 371
Score = 50 (22.7 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 66 SILNILDDELLQNVGNY--ILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLD 123
SIL+++ +++ + + NY LS ++G I G H T+ + +IL ++ + LD
Sbjct: 216 SILDLIVNKITKCI-NYGDSLSGVPFDG-IGGGNNQLGHLASTYAAILTLILTDQYELLD 273
Query: 124 -LDALI-GWVV 132
L LI W++
Sbjct: 274 NLRELIRDWLL 284
Score = 37 (18.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 131 VVFRQGVEGGFQGRTNKLVD 150
++ Q GGF+ + K VD
Sbjct: 475 LIIAQDESGGFKDKPGKQVD 494
>UNIPROTKB|Q59LD0 [details] [associations]
symbol:RAM1 "Putative uncharacterized protein RAM1"
species:237561 "Candida albicans SC5314" [GO:0018342 "protein
prenylation" evidence=NAS] InterPro:IPR001330 InterPro:IPR026872
Pfam:PF00432 CGD:CAL0001670 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0042127 GO:GO:0018343 eggNOG:COG5029
GO:GO:0005965 GO:GO:0018342 PANTHER:PTHR11774:SF6 EMBL:AACQ01000259
RefSeq:XP_710548.1 ProteinModelPortal:Q59LD0 STRING:Q59LD0
GeneID:3647859 KEGG:cal:CaO19.5046 Uniprot:Q59LD0
Length = 583
Score = 215 (80.7 bits), Expect = 5.4e-40, Sum P(3) = 5.4e-40
Identities = 52/131 (39%), Positives = 75/131 (57%)
Query: 3 HLATTYAAVNALISLGGEKSLPSIN---RSKVYTFLKCMKDPSGA-FRMHDAGEIDVRAC 58
HLA+TYAA+ LI + L ++ R + T K SGA F MH+ GE+D R+
Sbjct: 252 HLASTYAAILTLILTDQYELLDNLRELIRDWLLTLKKRSSCGSGASFIMHENGEMDARST 311
Query: 59 YTAISVASILNILD-----------DELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTF 107
Y A+ + ++LN+ + D L+ V N++ SCQTYEGG + P +EAHGGYT+
Sbjct: 312 YCALIIINLLNLTNYEENSSSPEELDPLIDGVENWLNSCQTYEGGFSNIPNTEAHGGYTY 371
Query: 108 CGLAAMILINE 118
C LA+ L+ E
Sbjct: 372 CALASYFLLYE 382
Score = 152 (58.6 bits), Expect = 5.4e-40, Sum P(3) = 5.4e-40
Identities = 40/112 (35%), Positives = 60/112 (53%)
Query: 219 QHRERE-PLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWL-- 275
Q +++E +F L++YLL+ +QD GG +DK K DYYHT Y LSGLSI +HS+
Sbjct: 456 QGQQQEVKVFDEEKLRQYLLIIAQDESGGFKDKPGKQVDYYHTNYSLSGLSILEHSYKFS 515
Query: 276 KDEDSSPLPRAV--------LGPY---SNVLEPVHPVFNIVLDRYHEAHEFF 316
+D++ L + G N P+HPVF I + + H++F
Sbjct: 516 QDDEGRSLAFQIDVEREEEERGGGRGGDNFTNPIHPVFGIPIKFVKKCHDYF 567
Score = 138 (53.6 bits), Expect = 5.4e-40, Sum P(3) = 5.4e-40
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 122 LDLDALIGWVVFRQG-VEGGFQGRTNKLVDGCYSFWQGGVFALLR 165
+D + L+ W V RQ ++GG GRTNKLVD CY FW GG+F+LL+
Sbjct: 402 IDWEKLLEWSVHRQHELKGGVDGRTNKLVDACYGFWMGGLFSLLQ 446
Score = 55 (24.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 23/82 (28%), Positives = 33/82 (40%)
Query: 85 SCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN---------EADRLD--LDALIGWVVF 133
SC + I E G E T+C L + L+N + LD +D + W+
Sbjct: 291 SCGSGASFIMHENG-EMDARSTYCALIIINLLNLTNYEENSSSPEELDPLIDGVENWLNS 349
Query: 134 RQGVEGGFQGRTNKLVDGCYSF 155
Q EGGF N G Y++
Sbjct: 350 CQTYEGGFSNIPNTEAHGGYTY 371
Score = 50 (22.7 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 66 SILNILDDELLQNVGNY--ILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLD 123
SIL+++ +++ + + NY LS ++G I G H T+ + +IL ++ + LD
Sbjct: 216 SILDLIVNKITKCI-NYGDSLSGVPFDG-IGGGNNQLGHLASTYAAILTLILTDQYELLD 273
Query: 124 -LDALI-GWVV 132
L LI W++
Sbjct: 274 NLRELIRDWLL 284
Score = 37 (18.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 131 VVFRQGVEGGFQGRTNKLVD 150
++ Q GGF+ + K VD
Sbjct: 475 LIIAQDESGGFKDKPGKQVD 494
>DICTYBASE|DDB_G0290671 [details] [associations]
symbol:rabggtb "protein geranylgeranyltransferase
type II" species:44689 "Dictyostelium discoideum" [GO:0018344
"protein geranylgeranylation" evidence=IEA;ISS] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA;ISS] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
dictyBase:DDB_G0290671 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GenomeReviews:CM000154_GR EMBL:AAFI02000164
eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663 KO:K05956 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 GO:GO:0005968 RefSeq:XP_001733035.1
ProteinModelPortal:B0G172 SMR:B0G172 STRING:B0G172
EnsemblProtists:DDB0233949 GeneID:8627741 KEGG:ddi:DDB_G0290671
Uniprot:B0G172
Length = 339
Score = 264 (98.0 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 59/168 (35%), Positives = 88/168 (52%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAI 62
HL +T +AV LI +L I+ + V ++ ++ G+F GE+D R Y AI
Sbjct: 98 HLLSTLSAVQILIQYD---ALDKIDINSVVDYVVKLQREDGSFVGDQWGEVDTRFSYAAI 154
Query: 63 SVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRL 122
S+L LD + YILSCQ ++GG PG+E+H G F + A+ ++NE +++
Sbjct: 155 MCLSLLKSLDKINCEKAVEYILSCQNFDGGFGSIPGAESHAGQIFTCVGALSILNEINKI 214
Query: 123 DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
D+D L W+ RQ GG GR K D CYS+W + + R H I
Sbjct: 215 DIDKLGWWLSERQLPNGGLNGRPEKSSDVCYSWWVLSALSAIDRLHWI 262
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 46/179 (25%), Positives = 79/179 (44%)
Query: 7 TYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVAS 66
+YAA+ L L KSL IN K ++ ++ G F E +T + S
Sbjct: 150 SYAAIMCLSLL---KSLDKINCEKAVEYILSCQNFDGGFGSIPGAESHAGQIFTCVGALS 206
Query: 67 ILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDA 126
ILN ++ + +G ++ Q GG+ G P + Y++ L+A+ I+ +D D
Sbjct: 207 ILNEINKIDIDKLGWWLSERQLPNGGLNGRPEKSSDVCYSWWVLSALSAIDRLHWIDNDK 266
Query: 127 LIGWVVFRQGVE-GGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQRGAE 184
L +++ Q E GG + + D ++F+ +L+ F I ES PV G +
Sbjct: 267 LKSYILKCQDNETGGIADKPGDIPDVFHTFFGICGLSLMGYFKDQI-ESIDPVYALGTK 324
Score = 110 (43.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 24/122 (19%), Positives = 62/122 (50%)
Query: 21 KSLPSINRSKVYTFL-KCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNV 79
KSL +++++V +L C K +G F + + + + + +A+ + + LD + +V
Sbjct: 65 KSLDKLDKNEVIQWLLSCQKS-NGGFGGNTSHDDHLLSTLSAVQILIQYDALDKIDINSV 123
Query: 80 GNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEG 139
+Y++ Q +G G+ E +++ + + L+ D+++ + + +++ Q +G
Sbjct: 124 VDYVVKLQREDGSFVGDQWGEVDTRFSYAAIMCLSLLKSLDKINCEKAVEYILSCQNFDG 183
Query: 140 GF 141
GF
Sbjct: 184 GF 185
Score = 105 (42.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 53 IDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAA 112
I + Y +S +L LD V ++LSCQ GG G + H T +
Sbjct: 49 IRMNGMYWGLSSLYLLKSLDKLDKNEVIQWLLSCQKSNGGFGGNTSHDDHLLSTLSAVQI 108
Query: 113 MILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+I + D++D+++++ +VV Q +G F G VD +S+ +LL+ I
Sbjct: 109 LIQYDALDKIDINSVVDYVVKLQREDGSFVGDQWGEVDTRFSYAAIMCLSLLKSLDKI 166
Score = 81 (33.6 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLG 289
L+ Y+L C + GG+ DK D +HT + + GLS+ + KD+ S P LG
Sbjct: 267 LKSYILKCQDNETGGIADKPGDIPDVFHTFFGICGLSLM--GYFKDQIESIDPVYALG 322
Score = 51 (23.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 241 QDPRGGLRDKLRKPRDYYHTCYCLSGLS-ICQHSWLKDED 279
Q P GGL + K D ++ + LS LS I + W+ D D
Sbjct: 227 QLPNGGLNGRPEKSSDVCYSWWVLSALSAIDRLHWI-DND 265
>CGD|CAL0000126 [details] [associations]
symbol:BET2 species:5476 "Candida albicans" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
CGD:CAL0000126 InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AACQ01000032
GO:GO:0018344 GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956
PANTHER:PTHR11774:SF5 RefSeq:XP_719325.1 ProteinModelPortal:Q5ACS9
STRING:Q5ACS9 GeneID:3639025 KEGG:cal:CaO19.7563 Uniprot:Q5ACS9
Length = 341
Score = 256 (95.2 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 54/151 (35%), Positives = 84/151 (55%)
Query: 21 KSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVG 80
+SL R ++ F+ ++ P G+F+ GE+D R YTA+S S+LN L D +
Sbjct: 115 ESLNGNKRERLIKFITGLQLPDGSFQGDKYGEVDTRFVYTAVSSLSLLNALTDSIADTAS 174
Query: 81 NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLD----ALIGWVVFRQG 136
+I+ C ++GG PGSE+H F + A+ ++N+ D LD++ LI W+ RQ
Sbjct: 175 AFIMQCFNFDGGFGLIPGSESHAAQVFTCVGALAIMNKLDLLDVENKKVKLIDWLTERQV 234
Query: 137 V-EGGFQGRTNKLVDGCYSFWQGGVFALLRR 166
+ GGF GR KL D CYS+W ++L+R
Sbjct: 235 LPSGGFNGRPEKLPDVCYSWWVLSSLSILKR 265
Score = 87 (35.7 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQH 272
L+ ++L C GG D+ D YHTC+ ++GLS+ +
Sbjct: 274 LENFILTCQDLENGGFSDRPGNQTDVYHTCFAIAGLSLIDY 314
>TAIR|locus:2039752 [details] [associations]
symbol:PGGT-I species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IMP;IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IPI]
[GO:0018344 "protein geranylgeranylation" evidence=IMP;IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=TAS] InterPro:IPR001330 Pfam:PF00432 GO:GO:0009737
EMBL:CP002685 GO:GO:0009733 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0009414 EMBL:AC004218 GO:GO:0009788 eggNOG:COG5029
GO:GO:0004662 GO:GO:0018344 KO:K11713 HSSP:P53610 OMA:PDLYHSY
EMBL:BT002465 EMBL:BT008464 IPI:IPI00537488 PIR:T00565
RefSeq:NP_181487.1 UniGene:At.16938 ProteinModelPortal:O80642
SMR:O80642 STRING:O80642 PaxDb:O80642 PRIDE:O80642
EnsemblPlants:AT2G39550.1 GeneID:818540 KEGG:ath:AT2G39550
TAIR:At2g39550 InParanoid:O80642 PhylomeDB:O80642
ProtClustDB:CLSN2683354 BioCyc:MetaCyc:AT2G39550-MONOMER
ArrayExpress:O80642 Genevestigator:O80642 Uniprot:O80642
Length = 375
Score = 282 (104.3 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 62/173 (35%), Positives = 97/173 (56%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAI 62
HLA+TY A+ L +G + S ++S + + + +D +H GE D+R Y A
Sbjct: 134 HLASTYCALAILKVIGHDLSTID-SKSLLISMINLQQDDGSFMPIHIGGETDLRFVYCAA 192
Query: 63 SVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAM--------- 113
++ +L+ ++ NYIL+CQ+Y+GG PGSE+HGG T+C +A++
Sbjct: 193 AICYMLDSWSGMDKESAKNYILNCQSYDGGFGLIPGSESHGGATYCAIASLRLMGYIGVD 252
Query: 114 ILINEADR--LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALL 164
+L N++ +D L+ W + RQ +GGFQGRTNK D CY+FW G V L+
Sbjct: 253 LLSNDSSSSIIDPSLLLNWCLQRQANDGGFQGRTNKPSDTCYAFWIGAVLKLI 305
Score = 56 (24.8 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 224 EPLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPL 283
+ L +AL+++L+ C Q GG + D YH+ Y + S+ L+++ SPL
Sbjct: 308 DALIDKMALRKFLMSC-QSKYGGFSKFPGQLPDLYHSYYGYTAFSL-----LEEQGLSPL 361
>ASPGD|ASPL0000011885 [details] [associations]
symbol:AN3747 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005968 "Rab-protein geranylgeranyltransferase
complex" evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0006612 EMBL:BN001302 GO:GO:0006888 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180334 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 EnsemblFungi:CADANIAT00004976 Uniprot:C8V7A2
Length = 334
Score = 257 (95.5 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 58/174 (33%), Positives = 91/174 (52%)
Query: 3 HLATTYAAVNALISLGGEKSLPSIN---RSKVYTFLKCMKDP-SGAFRMHDAGEIDVRAC 58
HL T +AV L++L L + KV +F+ ++D +G+F + GE+D R
Sbjct: 95 HLLYTVSAVQILVTLDAVDELEKRGLGGKLKVGSFIAGLQDKETGSFMGDEWGELDTRFL 154
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
Y A++ S+L +LD + +Y+ C+ +GG PG+E+H G F + A+ +
Sbjct: 155 YGALNALSLLGLLDLVDVAKAVSYVQRCENLDGGYGVTPGAESHAGQVFTCVGALAIAGR 214
Query: 119 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIG 172
D +D D L GW+ RQ GG GR KL D CYS+W G A++ + + I G
Sbjct: 215 LDLVDKDRLGGWLSERQLDHGGLNGRPEKLADACYSWWVGASLAMIGKLNWIDG 268
Score = 92 (37.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
Y ++ +L D N +++LSCQ GG PG +AH YT + ++ ++
Sbjct: 52 YWGLTALHLLGCPDGLPRDNAVDFVLSCQQENGGFGAAPGHDAHLLYTVSAVQILVTLDA 111
Query: 119 ADRLDLDALIG 129
D L+ L G
Sbjct: 112 VDELEKRGLGG 122
Score = 77 (32.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 232 LQRYLLLCSQDPR-GGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDED 279
L Y+L C QDP GG D+ D +HT + ++GLS+ + +++ D
Sbjct: 271 LAAYILRC-QDPEAGGFADRPGNAVDVFHTHFAIAGLSLLGYEGVEEVD 318
>FB|FBgn0028970 [details] [associations]
symbol:betaggt-II "beta subunit of type II geranylgeranyl
transferase" species:7227 "Drosophila melanogaster" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=NAS]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 EMBL:AE014134
InterPro:IPR008930 SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0004662
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392 KO:K05956
OMA:ESHAGLI PANTHER:PTHR11774:SF5 EMBL:AF133269 EMBL:AY060784
RefSeq:NP_524894.1 UniGene:Dm.1765 HSSP:Q08603 SMR:Q9XZ68
IntAct:Q9XZ68 MINT:MINT-777402 STRING:Q9XZ68
EnsemblMetazoa:FBtr0077631 GeneID:47757 KEGG:dme:Dmel_CG18627
UCSC:CG18627-RA CTD:47757 FlyBase:FBgn0028970 InParanoid:Q9XZ68
OrthoDB:EOG41VHJN GenomeRNAi:47757 NextBio:839096 Uniprot:Q9XZ68
Length = 347
Score = 241 (89.9 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 56/175 (32%), Positives = 90/175 (51%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHL T +A+ L + +L I+R V F+ ++ P G+F GE+D R + A
Sbjct: 105 PHLLYTLSAIQILCTYD---ALEEIDREAVVRFVVGLQQPDGSFFGDKWGEVDTRFSFCA 161
Query: 62 ISVASILNILDDEL-LQNVGNYILSC--QTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
++ ++L ++ + ++ ++LSC QT +GG +PG+E+H G +C + L +
Sbjct: 162 VASLTLLGRMEQTIDVEKAVKFVLSCCNQT-DGGFGSKPGAESHAGLIYCCVGFFSLTHR 220
Query: 119 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGE 173
LD+D L W+ RQ GG GR KL D CYS+W ++ R H I E
Sbjct: 221 LHLLDVDKLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLTIMGRLHWISSE 275
Score = 98 (39.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 33/164 (20%), Positives = 70/164 (42%)
Query: 8 YAAVNALISLGGEKSLPSINRSKVYTFLK-CMKDPSGAFRMHDAGEIDVRACYTAISVAS 66
Y AL +G L + R + F+K C +G F + + + +AI +
Sbjct: 62 YWGTTALDIMG---QLERLERKSIIEFVKRCQCPNTGGFAPCEGHDPHLLYTLSAIQILC 118
Query: 67 ILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR-LDLD 125
+ L++ + V +++ Q +G G+ E ++FC +A++ L+ ++ +D++
Sbjct: 119 TYDALEEIDREAVVRFVVGLQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGRMEQTIDVE 178
Query: 126 ALIGWVVFR-QGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFH 168
+ +V+ +GGF + + G F+L R H
Sbjct: 179 KAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSLTHRLH 222
Score = 89 (36.4 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 276
LQ+++L C GG D+ D +HT + + GLS+ HS LK
Sbjct: 277 LQQFILSCQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSGLK 321
Score = 82 (33.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 28/114 (24%), Positives = 48/114 (42%)
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYE-GGIAGEPGSEAHGGYTFCGLAAMILIN 117
Y + I+ L+ +++ ++ CQ GG A G + H YT + + +
Sbjct: 62 YWGTTALDIMGQLERLERKSIIEFVKRCQCPNTGGFAPCEGHDPHLLYTLSAIQILCTYD 121
Query: 118 EADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSII 171
+ +D +A++ +VV Q +G F G VD +SF LL R I
Sbjct: 122 ALEEIDREAVVRFVVGLQQPDGSFFGDKWGEVDTRFSFCAVASLTLLGRMEQTI 175
>TAIR|locus:2177058 [details] [associations]
symbol:RGTB1 "RAB geranylgeranyl transferase beta subunit
1" species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 GO:GO:0005829
EMBL:CP002688 GenomeReviews:BA000015_GR InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 HSSP:Q08603
EMBL:BT004816 EMBL:BT004818 EMBL:AK227802 IPI:IPI00534125
RefSeq:NP_568259.1 UniGene:At.46789 ProteinModelPortal:Q84J75
STRING:Q84J75 PaxDb:Q84J75 PRIDE:Q84J75 EnsemblPlants:AT5G12210.1
GeneID:831094 KEGG:ath:AT5G12210 TAIR:At5g12210 InParanoid:Q84J75
OMA:ADSICEY PhylomeDB:Q84J75 ProtClustDB:PLN03201
Genevestigator:Q84J75 Uniprot:Q84J75
Length = 321
Score = 252 (93.8 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 58/169 (34%), Positives = 89/169 (52%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PH+ T +AV +++L + ++ I KV +++ +++ G+F GEID R Y A
Sbjct: 87 PHILYTLSAVQ-ILALFDKINILDIG--KVSSYVAKLQNEDGSFSGDMWGEIDTRFSYIA 143
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
I SIL LD ++ YI+SC+ +GG PG+E+H G FC + A+ +
Sbjct: 144 ICCLSILKCLDKINVEKAVKYIVSCKNLDGGFGCTPGAESHAGQIFCCVGALAITGSLHH 203
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+D D+L W+ RQ GG GR KL D CYS+W ++ R H I
Sbjct: 204 VDKDSLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWI 252
Score = 102 (41.0 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 28/144 (19%), Positives = 68/144 (47%)
Query: 1 MPHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYT 60
M HL A L +L L ++ +V ++L + SG F + + + +
Sbjct: 36 MDHLRMN-GAYWGLTTLDLLDKLGCVSEEEVISWLMTCQHESGGFAGNTGHDPHILYTLS 94
Query: 61 AISVASI---LNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN 117
A+ + ++ +NILD + V +Y+ Q +G +G+ E +++ + + ++
Sbjct: 95 AVQILALFDKINILD---IGKVSSYVAKLQNEDGSFSGDMWGEIDTRFSYIAICCLSILK 151
Query: 118 EADRLDLDALIGWVVFRQGVEGGF 141
D+++++ + ++V + ++GGF
Sbjct: 152 CLDKINVEKAVKYIVSCKNLDGGF 175
Score = 101 (40.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 24/101 (23%), Positives = 48/101 (47%)
Query: 55 VRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMI 114
+ Y ++ +L+ L + V +++++CQ GG AG G + H YT + +
Sbjct: 41 MNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQHESGGFAGNTGHDPHILYTLSAVQILA 100
Query: 115 LINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSF 155
L ++ + LD+ + +V Q +G F G +D +S+
Sbjct: 101 LFDKINILDIGKVSSYVAKLQNEDGSFSGDMWGEIDTRFSY 141
Score = 70 (29.7 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSS-PLP 284
L +++L C GG+ D+ D +HT + ++GLS+ ++ +K D + LP
Sbjct: 257 LVKFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEYPGVKVIDPAYALP 310
>SGD|S000006380 [details] [associations]
symbol:BET2 "Beta subunit of Type II
geranylgeranyltransferase" species:4932 "Saccharomyces cerevisiae"
[GO:0018344 "protein geranylgeranylation" evidence=IEA;IDA]
[GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA;IDA] [GO:0005968 "Rab-protein
geranylgeranyltransferase complex" evidence=IDA;IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0006612 "protein targeting to membrane"
evidence=IMP] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP] [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 SGD:S000006380
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612
EMBL:BK006949 GO:GO:0006888 EMBL:U25842 eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 GO:GO:0005968
OrthoDB:EOG43V34B EMBL:M29585 EMBL:M26597 EMBL:AY558067 PIR:S59834
RefSeq:NP_015502.1 ProteinModelPortal:P20133 SMR:P20133
DIP:DIP-2214N IntAct:P20133 MINT:MINT-642059 STRING:P20133
PaxDb:P20133 EnsemblFungi:YPR176C GeneID:856306 KEGG:sce:YPR176C
CYGD:YPR176c OMA:ERQDYES NextBio:981673 Genevestigator:P20133
GermOnline:YPR176C Uniprot:P20133
Length = 325
Score = 247 (92.0 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 61/177 (34%), Positives = 91/177 (51%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAI 62
HL TT +AV L + L + ++ +F++ + G+F+ GE+D R YTA+
Sbjct: 84 HLLTTLSAVQILATYDALDVLGKDRKVRLISFIRGNQLEDGSFQGDRFGEVDTRFVYTAL 143
Query: 63 SVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRL 122
S SIL L E++ +++L C ++GG P +E+H F L A+ + N+ D L
Sbjct: 144 SALSILGELTSEVVDPAVDFVLKCYNFDGGFGLCPNAESHAAQAFTCLGALAIANKLDML 203
Query: 123 DLDAL--IGW-VVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPT 176
D L IGW + RQ EGG GR +KL D CYS+W A++ R I E T
Sbjct: 204 SDDQLEEIGWWLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLAIIGRLDWINYEKLT 260
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 45/176 (25%), Positives = 88/176 (50%)
Query: 8 YAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRA--CYTAISVA 65
Y A++AL S+ GE + ++ + + LKC G +A +A C A+++A
Sbjct: 140 YTALSAL-SILGELTSEVVDPAVDFV-LKCYNFDGGFGLCPNAESHAAQAFTCLGALAIA 197
Query: 66 SILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLD 125
+ L++L D+ L+ +G ++ Q EGG+ G P Y++ L+++ +I D ++ +
Sbjct: 198 NKLDMLSDDQLEEIGWWLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLAIIGRLDWINYE 257
Query: 126 ALIGWVVFRQGVE-GGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIG-ESPTPVD 179
L +++ Q + GG R VD ++ + GV L S++G ++ P+D
Sbjct: 258 KLTEFILKCQDEKKGGISDRPENEVDVFHTVF--GVAGL-----SLMGYDNLVPID 306
Score = 86 (35.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/118 (22%), Positives = 52/118 (44%)
Query: 28 RSKVYTF-LKCMKDPSGAFR---MHDAGEIDVRACYTAISVASILNILDDELLQNVGNYI 83
+ +V +F L C D GAF HDA + + ++ L++L + + ++I
Sbjct: 57 KEEVISFVLSCWDDKYGAFAPFPRHDAHLLTTLSAVQILATYDALDVLGKDRKVRLISFI 116
Query: 84 LSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGF 141
Q +G G+ E + + L+A+ ++ E +D + +V+ +GGF
Sbjct: 117 RGNQLEDGSFQGDRFGEVDTRFVYTALSALSILGELTSEVVDPAVDFVLKCYNFDGGF 174
Score = 75 (31.5 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 16/61 (26%), Positives = 32/61 (52%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSP-LPRAVLGP 290
L ++L C + +GG+ D+ D +HT + ++GLS+ + L D +P++V
Sbjct: 259 LTEFILKCQDEKKGGISDRPENEVDVFHTVFGVAGLSLMGYDNLVPIDPIYCMPKSVTSK 318
Query: 291 Y 291
+
Sbjct: 319 F 319
>TAIR|locus:2088614 [details] [associations]
symbol:RGTB2 "RAB geranylgeranyl transferase beta subunit
2" species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432 GO:GO:0005829
EMBL:CP002686 InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AP002040
EMBL:AC069473 EMBL:AP002063 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 OMA:ERQDYES HSSP:Q08603 ProtClustDB:PLN03201
EMBL:BT028896 IPI:IPI00545274 RefSeq:NP_187814.1 RefSeq:NP_850567.1
UniGene:At.39649 ProteinModelPortal:Q9LHL5 SMR:Q9LHL5
EnsemblPlants:AT3G12070.1 EnsemblPlants:AT3G12070.2 GeneID:820381
KEGG:ath:AT3G12070 TAIR:At3g12070 InParanoid:Q9LHL5
PhylomeDB:Q9LHL5 Genevestigator:Q9LHL5 Uniprot:Q9LHL5
Length = 317
Score = 253 (94.1 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 60/170 (35%), Positives = 88/170 (51%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PH+ T +AV L +K L ++ KV ++ +++ G+F GE+D R Y A
Sbjct: 82 PHVLYTLSAVQILALF--DK-LNILDVEKVSNYIAGLQNEDGSFSGDIWGEVDTRFSYIA 138
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
I SIL LD ++ +YI+SC+ +GG PG+E+H G FC + A+ + R
Sbjct: 139 ICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQIFCCVGALAITGNLHR 198
Query: 122 LDLDALIGWVVFRQGVE-GGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+D D L W+ RQ E GG GR KL D CYS+W ++ R H I
Sbjct: 199 VDKDLLGWWLCERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWI 248
Score = 115 (45.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 32/144 (22%), Positives = 69/144 (47%)
Query: 1 MPHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYT 60
M HL A L +L L S++ +V +++ + SG F + + V +
Sbjct: 31 MDHLRMN-GAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLS 89
Query: 61 AISVASI---LNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILIN 117
A+ + ++ LNILD ++ V NYI Q +G +G+ E +++ + + ++
Sbjct: 90 AVQILALFDKLNILD---VEKVSNYIAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILK 146
Query: 118 EADRLDLDALIGWVVFRQGVEGGF 141
D++++ + ++V + ++GGF
Sbjct: 147 CLDKINVKKAVDYIVSCKNLDGGF 170
Score = 108 (43.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 24/101 (23%), Positives = 49/101 (48%)
Query: 55 VRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMI 114
+ Y ++ ++L+ L V +++++CQ GG AG G + H YT + +
Sbjct: 36 MNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLSAVQILA 95
Query: 115 LINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSF 155
L ++ + LD++ + ++ Q +G F G VD +S+
Sbjct: 96 LFDKLNILDVEKVSNYIAGLQNEDGSFSGDIWGEVDTRFSY 136
Score = 66 (28.3 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 237 LLCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSS-PLPRAVL 288
+L SQD GG+ D+ D +HT + ++GLS+ ++ +K D + LP V+
Sbjct: 257 ILDSQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLEYPGVKTIDPAYALPVHVI 310
>POMBASE|SPAC167.02 [details] [associations]
symbol:ptb1 "geranylgeranyltransferase II beta subunit
Ptb1" species:4896 "Schizosaccharomyces pombe" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005968 "Rab-protein geranylgeranyltransferase complex"
evidence=ISO] [GO:0006612 "protein targeting to membrane"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0018344 "protein geranylgeranylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0070317 "negative regulation of G0 to G1 transition"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
PomBase:SPAC167.02 GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GO:GO:0070317 GenomeReviews:CU329670_GR InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0006612 GO:GO:0006888
GO:GO:0006995 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
GO:GO:0005968 EMBL:X92183 PIR:S65091 RefSeq:NP_593383.1
ProteinModelPortal:P46960 STRING:P46960 EnsemblFungi:SPAC167.02.1
GeneID:2543284 KEGG:spo:SPAC167.02 OrthoDB:EOG43V34B
NextBio:20804303 Uniprot:P46960
Length = 311
Score = 232 (86.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 53/163 (32%), Positives = 88/163 (53%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAI 62
H+ T AV L L SL +++ KV +++ +++ G+ + GEID R Y+ I
Sbjct: 80 HITNTVYAVQVLAMLD---SLHVVDKDKVASYIIGLQNEDGSMKGDRWGEIDARFLYSGI 136
Query: 63 SVASILNILDDELLQNVG-NYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ +IL LD L +N ++++ C ++GG PG+E+HG F +AA+ ++N+ D
Sbjct: 137 NCLAILGKLD-YLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAMVFTCVAALKILNKLDL 195
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALL 164
+D + L W+ RQ GG GR KL D CY +W A++
Sbjct: 196 IDEELLGWWISERQVKGGGLNGRPEKLPDSCYGWWDLSPLAII 238
Score = 122 (48.0 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 49/179 (27%), Positives = 82/179 (45%)
Query: 8 YAAVNALISLGGEKSLPSINRSKVYTFL-KCMKDPSGAFRMHDAGEID---VRACYTAIS 63
Y+ +N L LG L +N++ +L KC G F + E V C A+
Sbjct: 133 YSGINCLAILG---KLDYLNKNTAVDWLMKCYNF-DGGFGLCPGAESHGAMVFTCVAALK 188
Query: 64 VASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLD 123
+ + L+++D+ELL G +I Q GG+ G P Y + L+ + +I + D +D
Sbjct: 189 ILNKLDLIDEELL---GWWISERQVKGGGLNGRPEKLPDSCYGWWDLSPLAIIGKLDWID 245
Query: 124 LDALIGWVVFRQGVE-GGFQGRTNKLVDGCYSFWQGGVFALLRRFHSIIGESPTPVDQR 181
+ LI +++ Q + GGF R D ++ + +LL+ F +I PVD R
Sbjct: 246 RNQLIDFLLGTQDADSGGFADRKEDATDVYHTCFSLAGLSLLQ-FPNI-----EPVDPR 298
Score = 114 (45.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 26/122 (21%), Positives = 58/122 (47%)
Query: 21 KSLPSINRSKVYTFL-KCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNV 79
K I++ ++ +FL C+ + SG F + + + A+ V ++L+ L V
Sbjct: 47 KKKDQIDKERIVSFLLSCLTE-SGGFACYPGHDDHITNTVYAVQVLAMLDSLHVVDKDKV 105
Query: 80 GNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEG 139
+YI+ Q +G + G+ E + + G+ + ++ + D L+ + + W++ +G
Sbjct: 106 ASYIIGLQNEDGSMKGDRWGEIDARFLYSGINCLAILGKLDYLNKNTAVDWLMKCYNFDG 165
Query: 140 GF 141
GF
Sbjct: 166 GF 167
Score = 85 (35.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 53 IDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAA 112
+ V A Y + +L D + + +++LSC T GG A PG + H T +
Sbjct: 31 LHVSAIYWSCMSFWLLKKKDQIDKERIVSFLLSCLTESGGFACYPGHDDHITNTVYAVQV 90
Query: 113 MILINEADRLDLDALIGWVVFRQGVEGGFQG 143
+ +++ +D D + +++ Q +G +G
Sbjct: 91 LAMLDSLHVVDKDKVASYIIGLQNEDGSMKG 121
Score = 81 (33.6 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 237 LLCSQDP-RGGLRDKLRKPRDYYHTCYCLSGLSICQ 271
LL +QD GG D+ D YHTC+ L+GLS+ Q
Sbjct: 253 LLGTQDADSGGFADRKEDATDVYHTCFSLAGLSLLQ 288
>RGD|3530 [details] [associations]
symbol:Rabggtb "Rab geranylgeranyltransferase, beta subunit"
species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IDA] [GO:0018344
"protein geranylgeranylation" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001330 InterPro:IPR026873
Pfam:PF00432 RGD:3530 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 PDB:1DCE PDB:1LTX PDB:3C72 PDB:3DSS PDB:3DST
PDB:3DSU PDB:3DSV PDB:3DSW PDB:3DSX PDB:3HXB PDB:3HXC PDB:3HXD
PDB:3HXE PDB:3HXF PDB:4EHM PDB:4GTS PDB:4GTT PDB:4GTV PDBsum:1DCE
PDBsum:1LTX PDBsum:3C72 PDBsum:3DSS PDBsum:3DST PDBsum:3DSU
PDBsum:3DSV PDBsum:3DSW PDBsum:3DSX PDBsum:3HXB PDBsum:3HXC
PDBsum:3HXD PDBsum:3HXE PDBsum:3HXF PDBsum:4EHM PDBsum:4GTS
PDBsum:4GTT PDBsum:4GTV CTD:5876 HOVERGEN:HBG008182 EMBL:L10416
EMBL:S62097 IPI:IPI00421632 PIR:B45977 RefSeq:NP_619715.1
UniGene:Rn.107818 ProteinModelPortal:Q08603 SMR:Q08603 DIP:DIP-6138N
STRING:Q08603 PRIDE:Q08603 GeneID:25533 KEGG:rno:25533
InParanoid:Q08603 EvolutionaryTrace:Q08603 NextBio:607037
ArrayExpress:Q08603 Genevestigator:Q08603
GermOnline:ENSRNOG00000009992 Uniprot:Q08603
Length = 331
Score = 244 (91.0 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 54/169 (31%), Positives = 89/169 (52%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHL T +AV +++L S+ IN KV +++ ++ G+F GEID R + A
Sbjct: 93 PHLLYTLSAVQ-ILTL--YDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCA 149
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
++ ++L LD ++ ++LSC ++GG PGSE+H G +C + + ++ +
Sbjct: 150 VATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQ 209
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
++ D L W+ RQ GG GR KL D CYS+W ++ R H I
Sbjct: 210 VNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWI 258
Score = 119 (46.9 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 23 LPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGN- 81
L +N+ ++ F+K + G G D YT +S IL + D + NV
Sbjct: 63 LHRMNKEEILVFIKSCQHECGGVSA-SIGH-DPHLLYT-LSAVQILTLYDSIHVINVDKV 119
Query: 82 --YILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEG 139
Y+ S Q +G AG+ E ++FC +A + L+ + D ++++ I +V+ +G
Sbjct: 120 VAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 140 GFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
GF R + G A+ + H +
Sbjct: 180 GFGCRPGSESHAGQIYCCTGFLAITSQLHQV 210
Score = 96 (38.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 27/112 (24%), Positives = 51/112 (45%)
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
Y ++V ++ L + + +I SCQ GG++ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDS 110
Query: 119 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+++D ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 IHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 68 (29.0 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 276
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 238 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 278
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 261
>UNIPROTKB|F1LSM6 [details] [associations]
symbol:Rabggtb "Geranylgeranyl transferase type-2 subunit
beta" species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 RGD:3530 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 PANTHER:PTHR11774:SF5 IPI:IPI00421632
PRIDE:F1LSM6 Ensembl:ENSRNOT00000065997 ArrayExpress:F1LSM6
Uniprot:F1LSM6
Length = 331
Score = 244 (91.0 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 54/169 (31%), Positives = 89/169 (52%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHL T +AV +++L S+ IN KV +++ ++ G+F GEID R + A
Sbjct: 93 PHLLYTLSAVQ-ILTL--YDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCA 149
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
++ ++L LD ++ ++LSC ++GG PGSE+H G +C + + ++ +
Sbjct: 150 VATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQ 209
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
++ D L W+ RQ GG GR KL D CYS+W ++ R H I
Sbjct: 210 VNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWI 258
Score = 119 (46.9 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 36/151 (23%), Positives = 65/151 (43%)
Query: 23 LPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGN- 81
L +N+ ++ F+K + G G D YT +S IL + D + NV
Sbjct: 63 LHRMNKEEILVFIKSCQHECGGVSA-SIGH-DPHLLYT-LSAVQILTLYDSIHVINVDKV 119
Query: 82 --YILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEG 139
Y+ S Q +G AG+ E ++FC +A + L+ + D ++++ I +V+ +G
Sbjct: 120 VAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 140 GFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
GF R + G A+ + H +
Sbjct: 180 GFGCRPGSESHAGQIYCCTGFLAITSQLHQV 210
Score = 96 (38.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 27/112 (24%), Positives = 51/112 (45%)
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
Y ++V ++ L + + +I SCQ GG++ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDS 110
Query: 119 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+++D ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 IHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 68 (29.0 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 276
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 238 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 278
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 261
>UNIPROTKB|F1M052 [details] [associations]
symbol:Rabggtb "Geranylgeranyl transferase type-2 subunit
beta" species:10116 "Rattus norvegicus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 RGD:3530 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663 OMA:ESHAGLI
PANTHER:PTHR11774:SF5 IPI:IPI00951311 Ensembl:ENSRNOT00000013660
ArrayExpress:F1M052 Uniprot:F1M052
Length = 337
Score = 244 (91.0 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 54/169 (31%), Positives = 89/169 (52%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHL T +AV +++L S+ IN KV +++ ++ G+F GEID R + A
Sbjct: 99 PHLLYTLSAVQ-ILTL--YDSIHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCA 155
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
++ ++L LD ++ ++LSC ++GG PGSE+H G +C + + ++ +
Sbjct: 156 VATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQ 215
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
++ D L W+ RQ GG GR KL D CYS+W ++ R H I
Sbjct: 216 VNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWI 264
Score = 102 (41.0 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
Y ++V ++ L + + +I SCQ +EGG++ G + H YT + + L +
Sbjct: 58 YWGLTVMDLMGQLHRMNKEEILVFIKSCQ-HEGGVSASIGHDPHLLYTLSAVQILTLYDS 116
Query: 119 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+++D ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 117 IHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 168
Score = 68 (29.0 bits), Expect = 2.5e-26, Sum P(2) = 2.5e-26
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 276
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 269 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 313
>MGI|MGI:99537 [details] [associations]
symbol:Rabggtb "RAB geranylgeranyl transferase, b subunit"
species:10090 "Mus musculus" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018344 "protein geranylgeranylation" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 MGI:MGI:99537 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 EMBL:CH466532 eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
PDB:3PZ1 PDB:3PZ2 PDB:3PZ3 PDBsum:3PZ1 PDBsum:3PZ2 PDBsum:3PZ3
CTD:5876 HOVERGEN:HBG008182 OrthoDB:EOG4V6ZGV EMBL:U12922
EMBL:BC132473 EMBL:BC138547 IPI:IPI00133505 PIR:I49116 PIR:JC6177
RefSeq:NP_035361.2 UniGene:Mm.277831 ProteinModelPortal:P53612
SMR:P53612 STRING:P53612 PhosphoSite:P53612 PaxDb:P53612
PRIDE:P53612 Ensembl:ENSMUST00000167111 GeneID:19352 KEGG:mmu:19352
InParanoid:A2RTE6 EvolutionaryTrace:P53612 NextBio:296383
Bgee:P53612 CleanEx:MM_RABGGTB Genevestigator:P53612
GermOnline:ENSMUSG00000038975 Uniprot:P53612
Length = 339
Score = 243 (90.6 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 54/169 (31%), Positives = 89/169 (52%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHL T +AV +++L S+ IN KV +++ ++ G+F GEID R + A
Sbjct: 101 PHLLYTLSAVQ-ILTL--YDSVHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCA 157
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
++ ++L LD ++ ++LSC ++GG PGSE+H G +C + + ++ +
Sbjct: 158 VATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQ 217
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
++ D L W+ RQ GG GR KL D CYS+W ++ R H I
Sbjct: 218 VNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWI 266
Score = 124 (48.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 37/151 (24%), Positives = 65/151 (43%)
Query: 23 LPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGN- 81
L +NR ++ F+K + G G D YT +S IL + D + NV
Sbjct: 71 LHRMNREEILVFIKSCQHECGGISA-SIGH-DPHLLYT-LSAVQILTLYDSVHVINVDKV 127
Query: 82 --YILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEG 139
Y+ S Q +G AG+ E ++FC +A + L+ + D ++++ I +V+ +G
Sbjct: 128 VAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 187
Query: 140 GFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
GF R + G A+ + H +
Sbjct: 188 GFGCRPGSESHAGQIYCCTGFLAITSQLHQV 218
Score = 98 (39.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 28/112 (25%), Positives = 51/112 (45%)
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 59 YWGLTVMDLMGQLHRMNREEILVFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDS 118
Query: 119 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+++D ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 119 VHVINVDKVVAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 170
Score = 68 (29.0 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 276
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 271 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 315
Score = 45 (20.9 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 238 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 278
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 227 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 269
>ZFIN|ZDB-GENE-040426-2116 [details] [associations]
symbol:rabggtb "Rab geranylgeranyltransferase,
beta subunit" species:7955 "Danio rerio" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
ZFIN:ZDB-GENE-040426-2116 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0018344 GO:GO:0004663 GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 KO:K05956 OMA:ESHAGLI PANTHER:PTHR11774:SF5
CTD:5876 HOVERGEN:HBG008182 OrthoDB:EOG4V6ZGV EMBL:CT027702
EMBL:BC097066 IPI:IPI00613192 RefSeq:NP_998277.2 UniGene:Dr.79075
SMR:Q4V946 STRING:Q4V946 Ensembl:ENSDART00000099248 GeneID:406386
KEGG:dre:406386 InParanoid:Q4V946 NextBio:20817996 Uniprot:Q4V946
Length = 331
Score = 241 (89.9 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 53/169 (31%), Positives = 88/169 (52%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHL T +A+ ++SL S+ +I+ KV ++K ++ G+F GEID R + A
Sbjct: 93 PHLLYTLSAIQ-ILSL--YDSVNAIDVDKVVEYVKGLQQEDGSFAGDKWGEIDTRFSFCA 149
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
++ ++L LD + +++SC ++GG PGSE+H G +C + + + +
Sbjct: 150 VATLALLGKLDVINVDKAVEFVMSCMNFDGGFGCRPGSESHAGQIYCCTGFLSVTGQLHQ 209
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
++ D L W+ RQ GG GR KL D CYS+W ++ R H I
Sbjct: 210 VNADLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRIHWI 258
Score = 119 (46.9 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 31/122 (25%), Positives = 58/122 (47%)
Query: 23 LPSINRSKVYTFLK-CMKDPSG--AFRMHDAGEIDVRACYTAISVASILNILDDELLQNV 79
L +NR ++ F+K C D G A HD + + +S+ +N +D + V
Sbjct: 63 LSRMNREEIIEFIKSCQHDCGGISASIGHDPHLLYTLSAIQILSLYDSVNAID---VDKV 119
Query: 80 GNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEG 139
Y+ Q +G AG+ E ++FC +A + L+ + D +++D + +V+ +G
Sbjct: 120 VEYVKGLQQEDGSFAGDKWGEIDTRFSFCAVATLALLGKLDVINVDKAVEFVMSCMNFDG 179
Query: 140 GF 141
GF
Sbjct: 180 GF 181
Score = 104 (41.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLSRMNREEIIEFIKSCQHDCGGISASIGHDPHLLYTLSAIQILSLYDS 110
Query: 119 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+ +D+D ++ +V Q +G F G +D +SF ALL + I
Sbjct: 111 VNAIDVDKVVEYVKGLQQEDGSFAGDKWGEIDTRFSFCAVATLALLGKLDVI 162
Score = 69 (29.3 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSPLPRAVLGPY 291
L+ ++L C + GG D+ D +HT + ++GLS+ L DE P+ P
Sbjct: 263 LRNFILACQDEETGGFADRPGDMVDPFHTLFGVAGLSL-----LGDEQIKPVNPVFCMP- 316
Query: 292 SNVLEPV 298
+VL+ +
Sbjct: 317 EDVLQRI 323
Score = 43 (20.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 238 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSI 269
LC + P GGL + K D ++ + L+ L I
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKI 251
>UNIPROTKB|P53611 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=NAS] [GO:0007601 "visual perception" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0007601 GO:GO:0006464
Pathway_Interaction_DB:prlsignalingeventspathway eggNOG:COG5029
GO:GO:0018344 GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956
OMA:ESHAGLI PANTHER:PTHR11774:SF5 CTD:5876 HOVERGEN:HBG008182
OrthoDB:EOG4V6ZGV EMBL:U49245 EMBL:X98001 EMBL:Y08201 EMBL:BC020790
IPI:IPI00295849 PIR:G02431 RefSeq:NP_004573.2 UniGene:Hs.78948
ProteinModelPortal:P53611 SMR:P53611 IntAct:P53611 MINT:MINT-260716
STRING:P53611 PhosphoSite:P53611 DMDM:2506788 PaxDb:P53611
PRIDE:P53611 Ensembl:ENST00000319942 GeneID:5876 KEGG:hsa:5876
UCSC:uc001dgy.1 GeneCards:GC01P076251 HGNC:HGNC:9796 HPA:HPA026585
HPA:HPA027167 MIM:179080 neXtProt:NX_P53611 PharmGKB:PA34157
InParanoid:P53611 PhylomeDB:P53611 BRENDA:2.5.1.60 BindingDB:P53611
ChEMBL:CHEMBL2338 ChiTaRS:RABGGTB GenomeRNAi:5876 NextBio:22832
ArrayExpress:P53611 Bgee:P53611 CleanEx:HS_RABGGTB
Genevestigator:P53611 Uniprot:P53611
Length = 331
Score = 241 (89.9 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 54/169 (31%), Positives = 90/169 (53%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHL T +AV +++L S+ I+ +KV ++K ++ G+F GEID R + A
Sbjct: 93 PHLLYTLSAVQ-ILTL--YDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCA 149
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
++ ++L LD ++ ++LSC ++GG PGSE+H G +C + + ++ +
Sbjct: 150 VATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQ 209
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
++ D L W+ RQ GG GR KL D CYS+W ++ R H I
Sbjct: 210 VNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWI 258
Score = 118 (46.6 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 33/151 (21%), Positives = 67/151 (44%)
Query: 23 LPSINRSKVYTFLK-CMKDPSG--AFRMHDAGEIDVRACYTAISVASILNILDDELLQNV 79
L +NR ++ F+K C + G A HD + + +++ +N++D + V
Sbjct: 63 LHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVID---VNKV 119
Query: 80 GNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEG 139
Y+ Q +G AG+ E ++FC +A + L+ + D ++++ I +V+ +G
Sbjct: 120 VEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 140 GFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
GF R + G A+ + H +
Sbjct: 180 GFGCRPGSESHAGQIYCCTGFLAITSQLHQV 210
Score = 97 (39.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDS 110
Query: 119 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+ +D++ ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 INVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 69 (29.3 bits), Expect = 4.0e-26, Sum P(2) = 4.0e-26
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 276
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
Score = 45 (20.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 238 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 278
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 261
>UNIPROTKB|F1P4E5 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004663 "Rab geranylgeranyltransferase
activity" evidence=IEA] [GO:0018344 "protein geranylgeranylation"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:AADN02012381 IPI:IPI00594865 Ensembl:ENSGALT00000018575
Uniprot:F1P4E5
Length = 343
Score = 243 (90.6 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 53/169 (31%), Positives = 88/169 (52%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHL T +AV LI +SL ++ +K+ +++ ++ G+F GEID R + A
Sbjct: 105 PHLLYTLSAVQILILY---ESLHVVDVNKIVEYVQSLQKEDGSFAGDKWGEIDTRFSFCA 161
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ ++L LD + ++LSC ++GG PGSE+H G +C + + ++ +
Sbjct: 162 AATLALLGKLDAIDVGKAVEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITDQLHQ 221
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+++D L W+ RQ GG GR KL D CYS+W ++ R H I
Sbjct: 222 INVDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKMIGRLHWI 270
Score = 116 (45.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 40/171 (23%), Positives = 72/171 (42%)
Query: 4 LATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAIS 63
++ Y + A+ +G L +N+ ++ F+K + G G D YT +S
Sbjct: 59 MSGVYWGLTAMDLMG---QLHRMNKEEILAFIKSCQHECGGISA-SIGH-DPHLLYT-LS 112
Query: 64 VASILNILDDEL----LQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEA 119
IL IL + L + + Y+ S Q +G AG+ E ++FC A + L+ +
Sbjct: 113 AVQIL-ILYESLHVVDVNKIVEYVQSLQKEDGSFAGDKWGEIDTRFSFCAAATLALLGKL 171
Query: 120 DRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
D +D+ + +V+ +GGF R + G A+ + H I
Sbjct: 172 DAIDVGKAVEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITDQLHQI 222
Score = 66 (28.3 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 276
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 275 LRCFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 319
Score = 43 (20.2 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 238 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLS-ICQHSWLKDE 278
LC + P GGL + K D ++ + L+ L I + W+ E
Sbjct: 231 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKMIGRLHWIDRE 273
>UNIPROTKB|G8JKY6 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9913 "Bos taurus" [GO:0018344 "protein
geranylgeranylation" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA]
InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:DAAA02008284 Ensembl:ENSBTAT00000024551 Uniprot:G8JKY6
Length = 331
Score = 239 (89.2 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 53/169 (31%), Positives = 89/169 (52%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHL T +AV +++L ++ IN KV +++ ++ G+F GEID R + A
Sbjct: 93 PHLLYTLSAVQ-ILTLYDSINVIDIN--KVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCA 149
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
++ ++L LD ++ ++LSC ++GG PGSE+H G +C + + ++ +
Sbjct: 150 VATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQ 209
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
++ D L W+ RQ GG GR KL D CYS+W ++ R H I
Sbjct: 210 VNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWI 258
Score = 128 (50.1 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 35/151 (23%), Positives = 69/151 (45%)
Query: 23 LPSINRSKVYTFLK-CMKDPSG--AFRMHDAGEIDVRACYTAISVASILNILDDELLQNV 79
L +NR ++ TF+K C + G A HD + + +++ +N++D + V
Sbjct: 63 LHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVID---INKV 119
Query: 80 GNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEG 139
Y+ S Q +G AG+ E ++FC +A + L+ + D ++++ I +V+ +G
Sbjct: 120 VEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 140 GFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
GF R + G A+ + H +
Sbjct: 180 GFGCRPGSESHAGQIYCCTGFLAITSQLHQV 210
Score = 101 (40.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDS 110
Query: 119 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+ +D++ ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 INVIDINKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 68 (29.0 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 276
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
Score = 45 (20.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 238 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 278
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 261
>UNIPROTKB|Q5E9B3 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9913 "Bos taurus" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 eggNOG:COG5029 GO:GO:0018344 GO:GO:0004663
HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5 EMBL:BT021007
EMBL:BC147953 IPI:IPI00705500 RefSeq:NP_001015646.1
UniGene:Bt.20263 ProteinModelPortal:Q5E9B3 SMR:Q5E9B3 STRING:Q5E9B3
PRIDE:Q5E9B3 GeneID:533276 KEGG:bta:533276 CTD:5876
HOVERGEN:HBG008182 InParanoid:Q5E9B3 OrthoDB:EOG4V6ZGV
NextBio:20875982 Uniprot:Q5E9B3
Length = 331
Score = 239 (89.2 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 53/169 (31%), Positives = 89/169 (52%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHL T +AV +++L ++ IN KV +++ ++ G+F GEID R + A
Sbjct: 93 PHLLYTLSAVQ-ILTLYDSINVIDIN--KVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCA 149
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
++ ++L LD ++ ++LSC ++GG PGSE+H G +C + + ++ +
Sbjct: 150 VATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQ 209
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
++ D L W+ RQ GG GR KL D CYS+W ++ R H I
Sbjct: 210 VNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWI 258
Score = 128 (50.1 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 35/151 (23%), Positives = 69/151 (45%)
Query: 23 LPSINRSKVYTFLK-CMKDPSG--AFRMHDAGEIDVRACYTAISVASILNILDDELLQNV 79
L +NR ++ TF+K C + G A HD + + +++ +N++D + V
Sbjct: 63 LHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVID---INKV 119
Query: 80 GNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEG 139
Y+ S Q +G AG+ E ++FC +A + L+ + D ++++ I +V+ +G
Sbjct: 120 VEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 140 GFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
GF R + G A+ + H +
Sbjct: 180 GFGCRPGSESHAGQIYCCTGFLAITSQLHQV 210
Score = 101 (40.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDS 110
Query: 119 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+ +D++ ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 INVIDINKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 68 (29.0 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 276
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
Score = 45 (20.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 238 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 278
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 261
>UNIPROTKB|F1P6X0 [details] [associations]
symbol:RABGGTB "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018344 "protein geranylgeranylation"
evidence=IEA] [GO:0004663 "Rab geranylgeranyltransferase activity"
evidence=IEA] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0018344 GO:GO:0004663
GeneTree:ENSGT00530000063392 OMA:ESHAGLI PANTHER:PTHR11774:SF5
EMBL:AAEX03004896 Ensembl:ENSCAFT00000032473 Uniprot:F1P6X0
Length = 331
Score = 239 (89.2 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 53/169 (31%), Positives = 90/169 (53%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTA 61
PHL T +AV +++L S+ I+ +KV +++ ++ G+F GEID R + A
Sbjct: 93 PHLLYTLSAVQ-ILTL--YDSINVIDVNKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCA 149
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
++ ++L LD ++ ++LSC ++GG PGSE+H G +C + + ++ +
Sbjct: 150 VATLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQ 209
Query: 122 LDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
++ D L W+ RQ GG GR KL D CYS+W ++ R H I
Sbjct: 210 VNSDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWI 258
Score = 127 (49.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 35/151 (23%), Positives = 69/151 (45%)
Query: 23 LPSINRSKVYTFLK-CMKDPSG--AFRMHDAGEIDVRACYTAISVASILNILDDELLQNV 79
L +NR ++ TF+K C + G A HD + + +++ +N++D + V
Sbjct: 63 LHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVID---VNKV 119
Query: 80 GNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEG 139
Y+ S Q +G AG+ E ++FC +A + L+ + D ++++ I +V+ +G
Sbjct: 120 VEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 140 GFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
GF R + G A+ + H +
Sbjct: 180 GFGCRPGSESHAGQIYCCTGFLAITSQLHQV 210
Score = 100 (40.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/112 (25%), Positives = 52/112 (46%)
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
Y ++V ++ L + + +I SCQ GGI+ G + H YT + + L +
Sbjct: 51 YWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDS 110
Query: 119 ADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
+ +D++ ++ +V Q +G F G +D +SF ALL + +I
Sbjct: 111 INVIDVNKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAI 162
Score = 68 (29.0 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 276
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 263 LRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 307
Score = 45 (20.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 238 LCSQD-PRGGLRDKLRKPRDYYHTCYCLSGLSICQH-SWLKDE 278
LC + P GGL + K D ++ + L+ L I W+ E
Sbjct: 219 LCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDRE 261
>WB|WBGene00015099 [details] [associations]
symbol:ggtb-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
GO:GO:0009792 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008219 GO:GO:0000003 eggNOG:COG5029 EMBL:FO080148
GO:GO:0018344 GO:GO:0004663 RefSeq:NP_498559.1 RefSeq:NP_741214.2
UniGene:Cel.10970 ProteinModelPortal:P41992 SMR:P41992
STRING:P41992 PaxDb:P41992 PRIDE:P41992 EnsemblMetazoa:B0280.1a
GeneID:175998 KEGG:cel:CELE_B0280.1 UCSC:B0280.1a CTD:175998
WormBase:B0280.1a WormBase:B0280.1b GeneTree:ENSGT00530000063392
HOGENOM:HOG000180334 InParanoid:P41992 KO:K05956 OMA:ESHAGLI
NextBio:890666 PANTHER:PTHR11774:SF5 Uniprot:P41992
Length = 335
Score = 232 (86.7 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 50/168 (29%), Positives = 80/168 (47%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAI 62
HL T AV LI S+ + + ++K ++ G+F +GE+D R ++
Sbjct: 100 HLLHTLCAVQTLIIFN---SIEKADADTISEYVKGLQQEDGSFCGDLSGEVDTRFTLCSL 156
Query: 63 SVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRL 122
+ +L L + + +++ C +GG PGSE+H G +C + A+ + D +
Sbjct: 157 ATCHLLGRLSTLNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEI 216
Query: 123 DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
D D W+ FRQ GG GR KL D CYS+W A+L R + I
Sbjct: 217 DRDRTAEWLAFRQCDSGGLNGRPEKLPDVCYSWWVLASLAILGRLNFI 264
Score = 126 (49.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 29/121 (23%), Positives = 55/121 (45%)
Query: 50 AGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCG 109
A + V Y ++ + L+ + + NY+L C+ +GG PG ++H +T C
Sbjct: 48 AEHLRVSGIYWCVNAMDLSKQLERMSTEEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLCA 107
Query: 110 LAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHS 169
+ +I+ N ++ D D + +V Q +G F G + VD ++ LL R +
Sbjct: 108 VQTLIIFNSIEKADADTISEYVKGLQQEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLST 167
Query: 170 I 170
+
Sbjct: 168 L 168
Score = 99 (39.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 29/144 (20%), Positives = 59/144 (40%)
Query: 3 HLATT--YAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYT 60
HL + Y VNA+ L K L ++ ++ ++ ++ G + + +
Sbjct: 50 HLRVSGIYWCVNAM-DLS--KQLERMSTEEIVNYVLGCRNTDGGYGPAPGHDSHLLHTLC 106
Query: 61 AISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEAD 120
A+ I N ++ + Y+ Q +G G+ E +T C LA L+
Sbjct: 107 AVQTLIIFNSIEKADADTISEYVKGLQQEDGSFCGDLSGEVDTRFTLCSLATCHLLGRLS 166
Query: 121 RLDLDALIGWVVFRQGVEGGFQGR 144
L++D+ + +++ +GGF R
Sbjct: 167 TLNIDSAVRFLMRCYNTDGGFGTR 190
Score = 68 (29.0 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 229 SIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDED 279
S A+++++ C D GG D+ D +HT + ++ LS+ L+ D
Sbjct: 266 SDAMKKFIYACQDDETGGFADRPGDCADPFHTVFGIAALSLFGDDTLESVD 316
>UNIPROTKB|G4MQQ5 [details] [associations]
symbol:MGG_09304 "Type-2 protein geranylgeranyltransferase
subunit beta" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0006612 GO:GO:0006888
EMBL:CM001231 GO:GO:0018344 GO:GO:0004663 KO:K05956
PANTHER:PTHR11774:SF5 GO:GO:0005968 RefSeq:XP_003709954.1
ProteinModelPortal:G4MQQ5 EnsemblFungi:MGG_09304T0 GeneID:2680219
KEGG:mgr:MGG_09304 Uniprot:G4MQQ5
Length = 329
Score = 214 (80.4 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 52/171 (30%), Positives = 85/171 (49%)
Query: 3 HLATTYAAVN--ALISLGGEKSLPSINRSKVYTFLKCMKD-PSGAFRMHDAGEIDVRACY 59
H+ +T +AV A++ E R +V F+ +++ +G F + GE D R Y
Sbjct: 90 HMLSTVSAVQILAMVDALDELDKKGKGRRQVGKFIADLQNRQTGTFAGDEWGEEDTRFLY 149
Query: 60 TAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEA 119
A++ S+L +L+ + ++I++C ++GG PG+E+H G F +AA+ +
Sbjct: 150 GALNALSLLGLLEMVDVGKAVDHIVACANFDGGYGNRPGAESHSGQIFTCVAALSIAGRL 209
Query: 120 DRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
D +D D L W+ RQ GG GR K D CYS+W + R H I
Sbjct: 210 DLVDTDKLGRWLSERQIAGGGLNGRPEKQEDVCYSWWVLSSLETIGRTHWI 260
Score = 93 (37.8 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLKDEDSSP-LPRAVL 288
L ++L C +GG+ D+ D +HTC+ L+GLS+ + L+D D +P+A +
Sbjct: 265 LAAFILKCQDTEKGGMSDRPGNQVDVFHTCFGLTGLSLLKWPGLEDVDPVYCMPKATI 322
Score = 74 (31.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 82 YILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLD 123
++LSCQ GG PG +AH T + + +++ D LD
Sbjct: 70 FVLSCQHDNGGFGAAPGHDAHMLSTVSAVQILAMVDALDELD 111
>FB|FBgn0015000 [details] [associations]
symbol:betaggt-I "beta subunit of type I geranylgeranyl
transferase" species:7227 "Drosophila melanogaster" [GO:0004661
"protein geranylgeranyltransferase activity" evidence=ISS]
[GO:0007265 "Ras protein signal transduction" evidence=ISS]
[GO:0004662 "CAAX-protein geranylgeranyltransferase activity"
evidence=NAS] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0022008 InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0035050 GO:GO:0004661
HSSP:P53610 EMBL:U43587 ProteinModelPortal:Q24172 SMR:Q24172
STRING:Q24172 PaxDb:Q24172 PRIDE:Q24172 FlyBase:FBgn0015000
InParanoid:Q24172 OrthoDB:EOG489333 ArrayExpress:Q24172 Bgee:Q24172
Uniprot:Q24172
Length = 395
Score = 260 (96.6 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 61/169 (36%), Positives = 91/169 (53%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMH-DAGEIDVRACYTA 61
HLA TY ++ L++LG + L ++R + + ++ P G+F D E D+R Y A
Sbjct: 112 HLAMTYTSLAVLVTLGDD--LSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFVYCA 169
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
++ +L+ D + + +I Y+ G + E EAHGG TFC LAA+ L + R
Sbjct: 170 ATICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLHR 229
Query: 122 LD---LDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
LD ++ + W++FRQ GFQGR NK VD CYSFW G +L F
Sbjct: 230 LDATTVERMKRWLIFRQ--MDGFQGRPNKPVDTCYSFWIGASLCILNGF 276
>UNIPROTKB|E2QZU5 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392 CTD:5229
KO:K11713 OMA:FILSTQD EMBL:AAEX03007707 RefSeq:XP_538560.2
ProteinModelPortal:E2QZU5 Ensembl:ENSCAFT00000000341 GeneID:481440
KEGG:cfa:481440 NextBio:20856233 Uniprot:E2QZU5
Length = 377
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 56/170 (32%), Positives = 93/170 (54%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAF-RMHDAGEIDVRACYTA 61
H+A TY ++ L+ LG + L +N+ L+ ++ G+F + + E D+R Y A
Sbjct: 121 HIAMTYTGLSCLVILGDD--LSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCA 178
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ +LN ++ NYI +Y+ G+A G E+HGG TFCG+A++ L+++ +
Sbjct: 179 SCICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMDKLEE 238
Query: 122 L----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
+ +L+ + W + RQ + G+ GR NK VD CYSFW G LL+ F
Sbjct: 239 VFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIF 286
>UNIPROTKB|Q5EAD5 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9913 "Bos taurus" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001330 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008152
eggNOG:COG5029 GO:GO:0004662 EMBL:BT020634 IPI:IPI00715065
RefSeq:NP_001015560.1 UniGene:Bt.17618 ProteinModelPortal:Q5EAD5
SMR:Q5EAD5 PRIDE:Q5EAD5 GeneID:509322 KEGG:bta:509322 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 InParanoid:Q5EAD5 KO:K11713
BindingDB:Q5EAD5 ChEMBL:CHEMBL4347 NextBio:20868922 Uniprot:Q5EAD5
Length = 377
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 56/170 (32%), Positives = 92/170 (54%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAF-RMHDAGEIDVRACYTA 61
H+A TY ++ L+ LG + L +N+ L+ ++ G+F + + E D+R Y A
Sbjct: 121 HIAMTYTGLSCLVILGDD--LSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCA 178
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ +LN ++ NYI +Y+ G+A G E+HGG TFCG+A++ L+ + +
Sbjct: 179 SCICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEE 238
Query: 122 L----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
+ +L+ + W + RQ + G+ GR NK VD CYSFW G LL+ F
Sbjct: 239 VFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIF 286
>UNIPROTKB|F1RLE8 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
OMA:FILSTQD EMBL:CU693413 EMBL:CU694231 Ensembl:ENSSSCT00000015533
Uniprot:F1RLE8
Length = 318
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 55/170 (32%), Positives = 92/170 (54%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAF-RMHDAGEIDVRACYTA 61
H+A TY ++ L+ LG + L +N+ L+ ++ G+F + + E D+R Y A
Sbjct: 62 HIAMTYTGLSCLVILGDD--LSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCA 119
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ +LN ++ +YI +Y+ G+A G E+HGG TFCG+A++ L+ + +
Sbjct: 120 SCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEE 179
Query: 122 L----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
+ +L+ + W + RQ + G+ GR NK VD CYSFW G LL+ F
Sbjct: 180 VFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIF 227
>UNIPROTKB|P53609 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=IEA] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0034097 "response to cytokine stimulus" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=IEA] [GO:0018344 "protein
geranylgeranylation" evidence=TAS] InterPro:IPR001330 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008144
GO:GO:0008284 GO:GO:0008270 GO:GO:0034097 GO:GO:0042277
GO:GO:0045787 eggNOG:COG5029 DrugBank:DB00175 GO:GO:0005953
GO:GO:0004662 GO:GO:0018344 GO:GO:0019840 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
EMBL:L25441 EMBL:AY780790 EMBL:AC008494 IPI:IPI00022759
IPI:IPI00549741 PIR:A53044 RefSeq:NP_005014.2 UniGene:Hs.254006
ProteinModelPortal:P53609 SMR:P53609 STRING:P53609
PhosphoSite:P53609 DMDM:259016302 PaxDb:P53609 PRIDE:P53609
DNASU:5229 Ensembl:ENST00000379615 Ensembl:ENST00000419445
GeneID:5229 KEGG:hsa:5229 UCSC:uc003kqw.4 UCSC:uc010jch.3
GeneCards:GC05M114575 H-InvDB:HIX0032034 HGNC:HGNC:8895
HPA:HPA030646 MIM:602031 neXtProt:NX_P53609 PharmGKB:PA33233
InParanoid:P53609 OrthoDB:EOG4KD6MC PhylomeDB:P53609
BindingDB:P53609 ChEMBL:CHEMBL4135 GenomeRNAi:5229 NextBio:20214
Bgee:P53609 CleanEx:HS_PGGT1B Genevestigator:P53609
GermOnline:ENSG00000164219 Uniprot:P53609
Length = 377
Score = 248 (92.4 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 55/170 (32%), Positives = 91/170 (53%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAF-RMHDAGEIDVRACYTA 61
H+A TY ++ L+ LG + L +N+ L+ ++ G+F + + E D+R Y A
Sbjct: 121 HIAMTYTGLSCLVILGDD--LSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCA 178
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ +LN ++ YI +Y+ G+A G E+HGG TFCG+A++ L+ + +
Sbjct: 179 SCICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEE 238
Query: 122 L----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
+ +L+ + W + RQ + G+ GR NK VD CYSFW G LL+ F
Sbjct: 239 VFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIF 286
>RGD|621754 [details] [associations]
symbol:Pggt1b "protein geranylgeranyltransferase type I, beta
subunit" species:10116 "Rattus norvegicus" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IDA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA;TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0018344 "protein geranylgeranylation"
evidence=TAS] [GO:0034097 "response to cytokine stimulus"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=IMP] [GO:0008144 "drug binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0019840 "isoprenoid binding" evidence=IDA] [GO:0042277 "peptide
binding" evidence=IDA] InterPro:IPR001330 Pfam:PF00432 RGD:621754
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0045787 eggNOG:COG5029 GO:GO:0051771
GO:GO:0005953 GO:GO:0004662 GO:GO:0018344 PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1S64 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R PDBsum:1N4S
PDBsum:1S64 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:L24116 IPI:IPI00211844 PIR:B53044
RefSeq:NP_112344.1 UniGene:Rn.10031 ProteinModelPortal:P53610
SMR:P53610 IntAct:P53610 Ensembl:ENSRNOT00000004723 GeneID:81746
KEGG:rno:81746 UCSC:RGD:621754 InParanoid:P53610 BindingDB:P53610
ChEMBL:CHEMBL3989 EvolutionaryTrace:P53610 NextBio:615482
Genevestigator:P53610 GermOnline:ENSRNOG00000003541 Uniprot:P53610
Length = 377
Score = 245 (91.3 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 55/170 (32%), Positives = 92/170 (54%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAF-RMHDAGEIDVRACYTA 61
H+A TY ++ LI LG + L +++ L+ ++ G+F + + E D+R Y A
Sbjct: 121 HIAMTYTGLSCLIILGDD--LSRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCA 178
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ +LN ++ +YI +Y+ G+A G E+HGG TFCG+A++ L+ + +
Sbjct: 179 SCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEE 238
Query: 122 L----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
+ +L+ + W + RQ + G+ GR NK VD CYSFW G LL+ F
Sbjct: 239 VFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIF 286
>UNIPROTKB|P53610 [details] [associations]
symbol:Pggt1b "Geranylgeranyl transferase type-1 subunit
beta" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001330 Pfam:PF00432 RGD:621754
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008284
GO:GO:0034097 GO:GO:0045787 eggNOG:COG5029 GO:GO:0051771
GO:GO:0005953 GO:GO:0004662 GO:GO:0018344 PDB:1N4P PDB:1N4Q
PDB:1N4R PDB:1N4S PDB:1S64 PDB:1TNB PDB:1TNO PDB:1TNU PDB:1TNY
PDB:1TNZ PDBsum:1N4P PDBsum:1N4Q PDBsum:1N4R PDBsum:1N4S
PDBsum:1S64 PDBsum:1TNB PDBsum:1TNO PDBsum:1TNU PDBsum:1TNY
PDBsum:1TNZ GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:L24116 IPI:IPI00211844 PIR:B53044
RefSeq:NP_112344.1 UniGene:Rn.10031 ProteinModelPortal:P53610
SMR:P53610 IntAct:P53610 Ensembl:ENSRNOT00000004723 GeneID:81746
KEGG:rno:81746 UCSC:RGD:621754 InParanoid:P53610 BindingDB:P53610
ChEMBL:CHEMBL3989 EvolutionaryTrace:P53610 NextBio:615482
Genevestigator:P53610 GermOnline:ENSRNOG00000003541 Uniprot:P53610
Length = 377
Score = 245 (91.3 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 55/170 (32%), Positives = 92/170 (54%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAF-RMHDAGEIDVRACYTA 61
H+A TY ++ LI LG + L +++ L+ ++ G+F + + E D+R Y A
Sbjct: 121 HIAMTYTGLSCLIILGDD--LSRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCA 178
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ +LN ++ +YI +Y+ G+A G E+HGG TFCG+A++ L+ + +
Sbjct: 179 SCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEE 238
Query: 122 L----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
+ +L+ + W + RQ + G+ GR NK VD CYSFW G LL+ F
Sbjct: 239 VFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIF 286
>UNIPROTKB|F1NE58 [details] [associations]
symbol:PGGT1B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0008152 GeneTree:ENSGT00530000063392
OMA:FILSTQD EMBL:AADN02074198 EMBL:AADN02074199 EMBL:AADN02074200
EMBL:AADN02074201 IPI:IPI00575455 Ensembl:ENSGALT00000013349
Uniprot:F1NE58
Length = 332
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 55/170 (32%), Positives = 91/170 (53%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAF-RMHDAGEIDVRACYTA 61
H+A TY ++ L+ LG + L +N+ + L+ ++ G+F + + E D+R Y A
Sbjct: 75 HIAMTYTGLSCLVILGDD--LSRVNKDALLAGLRALQLEDGSFCAVLEGSENDMRFVYCA 132
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ +L+ ++ +YI +Y+ G+A G E+HGG TFCG+A++ L+ + +
Sbjct: 133 SCICYMLDNWSGMDMKKAIDYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEE 192
Query: 122 L----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
+ +L + W V RQ + G+ GR NK VD CYSFW G LL F
Sbjct: 193 VFSEKELSRIGRWCVMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLNLF 240
>MGI|MGI:1917514 [details] [associations]
symbol:Pggt1b "protein geranylgeranyltransferase type I,
beta subunit" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004659 "prenyltransferase activity"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=ISO] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0019840 "isoprenoid binding" evidence=ISO] [GO:0034097
"response to cytokine stimulus" evidence=ISO] [GO:0042277 "peptide
binding" evidence=ISO] [GO:0045787 "positive regulation of cell
cycle" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051771 "negative regulation of nitric-oxide synthase
biosynthetic process" evidence=ISO] InterPro:IPR001330 Pfam:PF00432
MGI:MGI:1917514 InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0046872
GO:GO:0008144 GO:GO:0008284 GO:GO:0008270 GO:GO:0034097
GO:GO:0008152 GO:GO:0042277 GO:GO:0045787 eggNOG:COG5029
GO:GO:0004662 GO:GO:0019840 GeneTree:ENSGT00530000063392 CTD:5229
HOGENOM:HOG000180333 HOVERGEN:HBG008181 KO:K11713 OMA:FILSTQD
OrthoDB:EOG4KD6MC EMBL:AK081731 IPI:IPI00225757 RefSeq:NP_766215.1
UniGene:Mm.262096 UniGene:Mm.393044 ProteinModelPortal:Q8BUY9
SMR:Q8BUY9 STRING:Q8BUY9 PhosphoSite:Q8BUY9 PaxDb:Q8BUY9
PRIDE:Q8BUY9 Ensembl:ENSMUST00000025354 GeneID:225467
KEGG:mmu:225467 UCSC:uc008evk.1 InParanoid:Q8BUY9 BindingDB:Q8BUY9
ChEMBL:CHEMBL2295 NextBio:377678 Bgee:Q8BUY9 Genevestigator:Q8BUY9
GermOnline:ENSMUSG00000024477 Uniprot:Q8BUY9
Length = 377
Score = 244 (91.0 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 55/170 (32%), Positives = 92/170 (54%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAF-RMHDAGEIDVRACYTA 61
H+A TY ++ LI LG + L +++ L+ ++ G+F + + E D+R Y A
Sbjct: 121 HIAMTYTGLSCLIILGDD--LGRVDKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCA 178
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ +LN ++ +YI +Y+ G+A G E+HGG TFCG+A++ L+ + +
Sbjct: 179 SCICYMLNNWSGMDMKKAISYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEE 238
Query: 122 L----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
+ +L+ + W + RQ + G+ GR NK VD CYSFW G LL+ F
Sbjct: 239 VFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIF 286
>UNIPROTKB|O18197 [details] [associations]
symbol:Y48E1B.3 "Protein Y48E1B.3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008152 EMBL:Z93393
GeneTree:ENSGT00530000063392 HOGENOM:HOG000180333 KO:K11713
HSSP:P53610 OMA:FILSTQD GeneID:174999 KEGG:cel:CELE_Y48E1B.3
CTD:174999 PIR:T27022 RefSeq:NP_001254397.1
ProteinModelPortal:O18197 SMR:O18197 DIP:DIP-26836N IntAct:O18197
MINT:MINT-1088947 EnsemblMetazoa:Y48E1B.3a UCSC:Y48E1B.3
WormBase:Y48E1B.3a NextBio:886354 ArrayExpress:O18197
Uniprot:O18197
Length = 360
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 55/177 (31%), Positives = 93/177 (52%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAG-EIDVRACYTA 61
+LA TY+A+ +L LG + L ++R + +K + +G F G E D+R + A
Sbjct: 115 NLAQTYSALLSLAILGDD--LKKVDRKAILKTVKTAQRDNGCFWSQGVGSESDMRFVFCA 172
Query: 62 ISVASILNILDDELLQ--NVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEA 119
++++ IL+ ++ + + ++ +GGI PG E+HGG TFC +A++ L N
Sbjct: 173 VAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCAIASLALSNRL 232
Query: 120 ------DRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
R D+D LI W + +Q + GF GR +K D CY+FW G +L +H +
Sbjct: 233 WTEEVLTRRDIDRLIRWAIQKQDI--GFHGRAHKPDDSCYAFWIGATLKILNAYHLV 287
>UNIPROTKB|F1N4H5 [details] [associations]
symbol:PGGT1B "Geranylgeranyl transferase type-1 subunit
beta" species:9913 "Bos taurus" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 GO:GO:0003824
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0008152
GeneTree:ENSGT00530000063392 IPI:IPI00715065 OMA:FILSTQD
EMBL:DAAA02027677 EMBL:DAAA02027678 EMBL:DAAA02027679
EMBL:DAAA02027680 Ensembl:ENSBTAT00000002466 Uniprot:F1N4H5
Length = 377
Score = 242 (90.2 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 53/161 (32%), Positives = 88/161 (54%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAF-RMHDAGEIDVRACYTA 61
H+A TY ++ L+ LG + L +N+ L+ ++ G+F + + E D+R Y A
Sbjct: 121 HIAMTYTGLSCLVILGDD--LSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCA 178
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ +LN ++ NYI +Y+ G+A G E+HGG TFCG+A++ L+ + +
Sbjct: 179 SCICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEE 238
Query: 122 L----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQG 158
+ +L+ + W + RQ + G+ GR NK VD CYSFW G
Sbjct: 239 VFSEKELNRIKRWCIMRQ--QNGYHGRPNKPVDTCYSFWVG 277
>ZFIN|ZDB-GENE-050913-85 [details] [associations]
symbol:pggt1b "protein geranylgeranyltransferase
type I, beta subunit" species:7955 "Danio rerio" [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016740 "transferase activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 ZFIN:ZDB-GENE-050913-85
InterPro:IPR008930 SUPFAM:SSF48239 GO:GO:0016740 GO:GO:0008152
eggNOG:COG5029 CTD:5229 HOGENOM:HOG000180333 HOVERGEN:HBG008181
KO:K11713 OrthoDB:EOG4KD6MC EMBL:BC097132 IPI:IPI00484889
RefSeq:NP_001025426.1 UniGene:Dr.78336 ProteinModelPortal:Q4V8Z9
SMR:Q4V8Z9 GeneID:570808 KEGG:dre:570808 NextBio:20890306
ArrayExpress:Q4V8Z9 Uniprot:Q4V8Z9
Length = 355
Score = 217 (81.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 55/170 (32%), Positives = 87/170 (51%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAF-RMHDAGEIDVRACYTA 61
H+ TY + L+ LG + L ++R+ + L+ ++ G+F + + E D+R Y A
Sbjct: 110 HVTMTYTGLACLLILGDD--LGRVDRAACVSGLRALQLEDGSFYAVPEGSENDMRFVYCA 167
Query: 62 ISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADR 121
+ +L+ Q +YI +++ GI G E+HGG TFC +A++ ++ +
Sbjct: 168 ACICFMLDDWSGMDRQKTIDYIRRSTSFDFGIGQGAGLESHGGSTFCAVASLCMMGKLRE 227
Query: 122 L----DLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRF 167
+ +L L W V RQ + GFQGR NK VD CYSFW G LL F
Sbjct: 228 VFSERELGRLRRWCVLRQ--QNGFQGRPNKPVDTCYSFWVGATLQLLDVF 275
Score = 46 (21.3 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 295 LEPVHPVFNIVL---DRYHEAHEFFSRS 319
L+PVH NI L D HE + RS
Sbjct: 326 LQPVHAALNISLRASDSLRRLHECWRRS 353
>WB|WBGene00013002 [details] [associations]
symbol:Y48E1B.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR001330
Pfam:PF00432 GO:GO:0003824 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0008152 EMBL:Z93393 GeneTree:ENSGT00530000063392 KO:K11713
GeneID:174999 KEGG:cel:CELE_Y48E1B.3 CTD:174999
RefSeq:NP_001254398.1 ProteinModelPortal:B7WNB1 SMR:B7WNB1
EnsemblMetazoa:Y48E1B.3c.1 EnsemblMetazoa:Y48E1B.3c.2
WormBase:Y48E1B.3c ArrayExpress:B7WNB1 Uniprot:B7WNB1
Length = 883
Score = 241 (89.9 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 55/177 (31%), Positives = 93/177 (52%)
Query: 3 HLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFRMHDAG-EIDVRACYTA 61
+LA TY+A+ +L LG + L ++R + +K + +G F G E D+R + A
Sbjct: 638 NLAQTYSALLSLAILGDD--LKKVDRKAILKTVKTAQRDNGCFWSQGVGSESDMRFVFCA 695
Query: 62 ISVASILNILDDELLQ--NVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEA 119
++++ IL+ ++ + + ++ +GGI PG E+HGG TFC +A++ L N
Sbjct: 696 VAISHILDGDKEQTIDWTKLAGFLRQSLNIDGGIGQAPGDESHGGSTFCAIASLALSNRL 755
Query: 120 ------DRLDLDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
R D+D LI W + +Q + GF GR +K D CY+FW G +L +H +
Sbjct: 756 WTEEVLTRRDIDRLIRWAIQKQDI--GFHGRAHKPDDSCYAFWIGATLKILNAYHLV 810
>GENEDB_PFALCIPARUM|PFF0120w [details] [associations]
symbol:PFF0120w "putative
geranylgeranyltransferase" species:5833 "Plasmodium falciparum"
[GO:0004661 "protein geranylgeranyltransferase activity"
evidence=ISS] InterPro:IPR001330 InterPro:IPR026873 Pfam:PF00432
InterPro:IPR008930 SUPFAM:SSF48239 EMBL:AL844505 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180334 KO:K05956 PANTHER:PTHR11774:SF5
RefSeq:XP_966015.1 ProteinModelPortal:C6KSM5
EnsemblProtists:PFF0120w:mRNA GeneID:3885742 KEGG:pfa:PFF0120w
EuPathDB:PlasmoDB:PF3D7_0602500 ProtClustDB:CLSZ2433471
Uniprot:C6KSM5
Length = 379
Score = 207 (77.9 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 43/144 (29%), Positives = 75/144 (52%)
Query: 28 RSKVYTFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILDDELLQNVGNYILSCQ 87
R ++ + + G+F+ GE+D R Y+A+S +ILN ++ + + +Y+L+
Sbjct: 154 RENTCKYILTLFNEDGSFKGDMWGEVDTRFVYSAVSCLTILNKINLVCVDKISSYLLTNY 213
Query: 88 TY-EGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTN 146
E G + G+E H FC +A + LI + ++ + L W+ RQ GGF GR
Sbjct: 214 AICENGFSWVSGNEPHAASVFCCIATLFLIQKLYLINENKLAHWLSLRQTTNGGFNGRAE 273
Query: 147 KLVDGCYSFWQGGVFALLRRFHSI 170
KL D CYS+W +L++++ I
Sbjct: 274 KLTDTCYSWWIFSTLIVLKKYNWI 297
Score = 68 (29.0 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 231 ALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSI 269
AL+ Y+LLC +GG+ D D HT + L+ LS+
Sbjct: 301 ALKNYILLCQDIEKGGISDNPDCLPDICHTFFGLAALSL 339
>POMBASE|SPAC2E1P5.04c [details] [associations]
symbol:cwg2 "geranylgeranyltransferase I beta subunit
Cwg2" species:4896 "Schizosaccharomyces pombe" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA]
[GO:0004663 "Rab geranylgeranyltransferase activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=NAS]
[GO:0006612 "protein targeting to membrane" evidence=IC]
[GO:0009250 "glucan biosynthetic process" evidence=IMP] [GO:0018344
"protein geranylgeranylation" evidence=IC] [GO:0034411 "cell wall
(1->3)-beta-D-glucan biosynthetic process" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071963
"establishment or maintenance of cell polarity regulating cell
shape" evidence=IMP] [GO:0004661 "protein geranylgeranyltransferase
activity" evidence=IDA] InterPro:IPR001330 Pfam:PF00432
PomBase:SPAC2E1P5.04c GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0006612 GO:GO:0071963 GO:GO:0034411
eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662 GO:GO:0018344
GO:GO:0004663 HOGENOM:HOG000180333 KO:K11713 EMBL:Z12155 PIR:S41686
RefSeq:NP_594142.1 ProteinModelPortal:P32434 STRING:P32434
EnsemblFungi:SPAC2E1P5.04c.1 GeneID:2541514 KEGG:spo:SPAC2E1P5.04c
OMA:HDLRFCY OrthoDB:EOG4WQ4BS NextBio:20802612 Uniprot:P32434
Length = 355
Score = 169 (64.5 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 44/118 (37%), Positives = 64/118 (54%)
Query: 2 PHLATTYAAVNALISLGGEKSLPSINRSKVYTFLKCMKDPSGAFR---MHDAGEIDVRAC 58
P LA T ++ L+ LG +L I+R + F++ K G FR + + D+R
Sbjct: 95 PQLAGTVFSICCLLFLGD--NLSRIDRDLIKNFVELCKTSQGHFRSIAVPSCSDQDMRQL 152
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILI 116
Y A ++AS+L+ + L ++ YI SCQ YEGG + P EAH G TFC LA+ LI
Sbjct: 153 YMATTIASLLDFSLSDPLCSI-QYIKSCQRYEGGFSLLPYGEAHAGATFCALASWSLI 209
Score = 96 (38.9 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 124 LDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFW 156
++ LI W+ RQ GG GRTNK VD CY++W
Sbjct: 234 VERLIRWLASRQLSSGGLNGRTNKDVDTCYAYW 266
Score = 40 (19.1 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 225 PLFHSIALQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLS 268
P L++YLLL +Q GG + D H+ L ++
Sbjct: 278 PFIDGGELEKYLLLHAQHALGGFSKTPGEFPDVLHSALGLYAMA 321
>DICTYBASE|DDB_G0269726 [details] [associations]
symbol:pggt1b "protein geranylgeranyltransferase type
I" species:44689 "Dictyostelium discoideum" [GO:0008152 "metabolic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004662 "CAAX-protein geranylgeranyltransferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0004659 "prenyltransferase activity" evidence=IEA]
InterPro:IPR001330 Pfam:PF00432 dictyBase:DDB_G0269726
EMBL:AAFI02000005 GenomeReviews:CM000150_GR InterPro:IPR008930
SUPFAM:SSF48239 GO:GO:0046872 GO:GO:0008152 eggNOG:COG5029
GO:GO:0004662 KO:K11713 RefSeq:XP_646228.1 HSSP:P53610
ProteinModelPortal:Q55DA3 GeneID:8617182 KEGG:ddi:DDB_G0269726
OMA:FILSTQD ProtClustDB:CLSZ2431398 Uniprot:Q55DA3
Length = 352
Score = 214 (80.4 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 56/174 (32%), Positives = 90/174 (51%)
Query: 1 MPHLATTYAAVNALISLGGEKSLPSINRSKVYTFL-KCMKDPSGAFR-MHDAGEIDVRAC 58
+P TY A+ L LG + S +N+ + L K ++ GA + G+ D+R
Sbjct: 112 LPSTPNTYCALLILRILGDDFS--GVNKKAIIDSLRKRQRESDGAISGSPNVGDYDLRHL 169
Query: 59 YTAISVASILNILDDELLQNVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINE 118
++A +++ IL+ ++ +YI SC +YE P EAHGG T+C +A++ L+
Sbjct: 170 FSACAISFILDDWSAINKESAIDYIKSCLSYEFAFGQTPQQEAHGGPTYCAIASLSLLGR 229
Query: 119 ADRLD--LDALIGWVVFRQGVEGGFQGRTNKLVDGCYSFWQGGVFALLRRFHSI 170
D L+ + L W+V +Q GF GRTNK D CY+FW G ++ R+ I
Sbjct: 230 LDVLEPFKEQLTFWLVKKQIT--GFCGRTNKDPDTCYAFWIGASLMMIDRYDLI 281
>UNIPROTKB|D3DQ78 [details] [associations]
symbol:RABGGTB "Geranylgeranyl transferase type-2 subunit
beta" species:9606 "Homo sapiens" [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0018344
"protein geranylgeranylation" evidence=IEA] InterPro:IPR001330
InterPro:IPR026873 Pfam:PF00432 InterPro:IPR008930 SUPFAM:SSF48239
EMBL:CH471059 EMBL:AL357314 GO:GO:0018344 GO:GO:0004663
PANTHER:PTHR11774:SF5 UniGene:Hs.78948 HGNC:HGNC:9796
ChiTaRS:RABGGTB IPI:IPI01013423 SMR:D3DQ78 Ensembl:ENST00000535300
Uniprot:D3DQ78
Length = 157
Score = 145 (56.1 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 89 YEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQGVEGGFQGRTNKL 148
++GG PGSE+H G +C + + ++ +++ D L W+ RQ GG GR KL
Sbjct: 3 FDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKL 62
Query: 149 VDGCYSFWQGGVFALLRRFHSI 170
D CYS+W ++ R H I
Sbjct: 63 PDVCYSWWVLASLKIIGRLHWI 84
Score = 69 (29.3 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 232 LQRYLLLCSQDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSWLK 276
L+ ++L C + GG D+ D +HT + ++GLS+ +K
Sbjct: 89 LRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIK 133
>CGD|CAL0001576 [details] [associations]
symbol:CDC43 species:5476 "Candida albicans" [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA]
[GO:0018344 "protein geranylgeranylation" evidence=IDA] [GO:0004662
"CAAX-protein geranylgeranyltransferase activity"
evidence=IGI;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004661 "protein
geranylgeranyltransferase activity" evidence=IEA] [GO:0004663 "Rab
geranylgeranyltransferase activity" evidence=IEA] [GO:0007163
"establishment or maintenance of cell polarity" evidence=IEA]
[GO:0034411 "cell wall (1->3)-beta-D-glucan biosynthetic process"
evidence=IEA] InterPro:IPR001330 Pfam:PF00432 CGD:CAL0001576
InterPro:IPR008930 SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0005953
GO:GO:0004662 GO:GO:0018344 KO:K11713 EMBL:AACQ01000309
RefSeq:XP_710190.1 PDB:3DRA PDBsum:3DRA ProteinModelPortal:Q59KC5
STRING:Q59KC5 GeneID:3648206 KEGG:cal:CaO19.1803
EvolutionaryTrace:Q59KC5 Uniprot:Q59KC5
Length = 384
Score = 87 (35.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 28/110 (25%), Positives = 53/110 (48%)
Query: 40 DPSGAFRMHDAGEIDVRACYTAISVASIL--------------NILDDELLQNVGNYILS 85
+ +G ++ + GE D+R CY A+ + ++ N D +L+ ++ +IL
Sbjct: 146 EENGDYKQY--GEPDLRVCYMALLIRHLMKYDANNNNNNREDSNETDIDLI-SLQQFILD 202
Query: 86 CQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ 135
GG + E+H G+TFC +A++ L+N L + W++ RQ
Sbjct: 203 RININGGFSSTIMDESHLGFTFCAIASLKLLNYPLE-KLKSTKEWLIHRQ 251
Score = 78 (32.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 139 GGFQGRTNKLVDGCYSFWQGG 159
GGF GR NKL D CYS+W G
Sbjct: 277 GGFNGRENKLSDTCYSWWCTG 297
>UNIPROTKB|Q59KC5 [details] [associations]
symbol:CDC43 "Putative uncharacterized protein CDC43"
species:237561 "Candida albicans SC5314" [GO:0004662 "CAAX-protein
geranylgeranyltransferase activity" evidence=IGI;IDA] [GO:0005953
"CAAX-protein geranylgeranyltransferase complex" evidence=IDA]
[GO:0018344 "protein geranylgeranylation" evidence=IDA]
InterPro:IPR001330 Pfam:PF00432 CGD:CAL0001576 InterPro:IPR008930
SUPFAM:SSF48239 eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662
GO:GO:0018344 KO:K11713 EMBL:AACQ01000309 RefSeq:XP_710190.1
PDB:3DRA PDBsum:3DRA ProteinModelPortal:Q59KC5 STRING:Q59KC5
GeneID:3648206 KEGG:cal:CaO19.1803 EvolutionaryTrace:Q59KC5
Uniprot:Q59KC5
Length = 384
Score = 87 (35.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 28/110 (25%), Positives = 53/110 (48%)
Query: 40 DPSGAFRMHDAGEIDVRACYTAISVASIL--------------NILDDELLQNVGNYILS 85
+ +G ++ + GE D+R CY A+ + ++ N D +L+ ++ +IL
Sbjct: 146 EENGDYKQY--GEPDLRVCYMALLIRHLMKYDANNNNNNREDSNETDIDLI-SLQQFILD 202
Query: 86 CQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLDLDALIGWVVFRQ 135
GG + E+H G+TFC +A++ L+N L + W++ RQ
Sbjct: 203 RININGGFSSTIMDESHLGFTFCAIASLKLLNYPLE-KLKSTKEWLIHRQ 251
Score = 78 (32.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 14/21 (66%), Positives = 15/21 (71%)
Query: 139 GGFQGRTNKLVDGCYSFWQGG 159
GGF GR NKL D CYS+W G
Sbjct: 277 GGFNGRENKLSDTCYSWWCTG 297
>SGD|S000003123 [details] [associations]
symbol:CDC43 "Beta subunit of geranylgeranyltransferase type
I" species:4932 "Saccharomyces cerevisiae" [GO:0004662
"CAAX-protein geranylgeranyltransferase activity" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=TAS] [GO:0005953 "CAAX-protein
geranylgeranyltransferase complex" evidence=IDA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=TAS] [GO:0004661
"protein geranylgeranyltransferase activity" evidence=IDA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004659
"prenyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0030010 "establishment of cell polarity"
evidence=TAS] [GO:0018344 "protein geranylgeranylation"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=TAS] InterPro:IPR001330 Pfam:PF00432 SGD:S000003123
GO:GO:0007264 EMBL:BK006941 InterPro:IPR008930 SUPFAM:SSF48239
GO:GO:0046872 GO:GO:0006874 GO:GO:0030010 EMBL:Z48618
eggNOG:COG5029 GO:GO:0005953 GO:GO:0004662 GO:GO:0018344
HOGENOM:HOG000180333 KO:K11713 OrthoDB:EOG4WQ4BS EMBL:M31114
EMBL:M74109 EMBL:Z72677 PIR:A40875 RefSeq:NP_011360.1
ProteinModelPortal:P18898 SMR:P18898 DIP:DIP-1232N IntAct:P18898
MINT:MINT-396220 STRING:P18898 PaxDb:P18898 PeptideAtlas:P18898
EnsemblFungi:YGL155W GeneID:852722 KEGG:sce:YGL155W CYGD:YGL155w
OMA:TCYSWWC NextBio:972105 Genevestigator:P18898 GermOnline:YGL155W
Uniprot:P18898
Length = 376
Score = 107 (42.7 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 34/130 (26%), Positives = 58/130 (44%)
Query: 33 TFLKCMKDPSGAFRMHDAGEIDVRACYTAISVASILNILD----DELL--QNVGNYILSC 86
+F+ C+ + D+ D+R CY A+++ I DE + + + YI+S
Sbjct: 145 SFVSCLDYKTNCGSSVDSD--DLRFCYIAVAILYICGCRSKEDFDEYIDTEKLLGYIMSQ 202
Query: 87 QTYEGGIAGEPGSEAHGGYTFCGLAAMILINEADRLD---LDALIGWVVFRQGVEGG--- 140
Q Y G +E H GYT C L+ + L++ ++L + I W++ RQ G
Sbjct: 203 QCYNGAFGAH--NEPHSGYTSCALSTLALLSSLEKLSDKFKEDTITWLLHRQVSSHGCMK 260
Query: 141 FQGRTNKLVD 150
F+ N D
Sbjct: 261 FESELNASYD 270
Score = 44 (20.5 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 241 QDPRGGLRDKLRKPRDYYHTCYCLSGLSICQHSW 274
Q GG + + K D + +CL+ L + W
Sbjct: 271 QSDDGGFQGRENKFADTCYAFWCLNSLHLLTKDW 304
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.439 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 319 300 0.00095 115 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 65
No. of states in DFA: 613 (65 KB)
Total size of DFA: 239 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.06u 0.10s 21.16t Elapsed: 00:00:00
Total cpu time: 21.07u 0.10s 21.17t Elapsed: 00:00:00
Start: Fri May 10 19:25:22 2013 End: Fri May 10 19:25:22 2013