Citrus Sinensis ID: 020983
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| DNA-directed RNA polymerase II subunit RPB3-A | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB3 is part of the core element with the central large cleft and the clamp element that moves to open and close the cleft. | confident | Q39211 |
| DNA-directed RNA polymerase II subunit rpb3 | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. Rpb3 is part of the core element with the central large cleft and the clamp element that moves to open and close the cleft. | probable | Q54DH7 |
| DNA-directed RNA polymerase subunit D | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | probable | A5UN55 |
Prediction of Enzyme Commission Number
| EC Number | Description | Confidence Level | |||||||||
| 2.-.-.- | Transferases. | probable | |||||||||
| 2.7.-.- | Transferring phosphorous-containing groups. | probable | |||||||||
| 2.7.7.- | Nucleotidyltransferases. | probable | |||||||||
| 2.7.7.6 | DNA-directed RNA polymerase. | probable |
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 2PA8, chain D Confidence level:very confident Coverage over the Query: 11-132,146-297 View the alignment between query and template View the model in PyMOL |
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Template: 3I4M, chain C Confidence level:confident Coverage over the Query: 10-237,264-306 View the alignment between query and template View the model in PyMOL |