Citrus Sinensis ID: 020987

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------32
Protein Sequence
MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPIFLNSSTQDQGMIKLEGSQQHDQKIDQRIAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGSTSDNSSYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Secondary Structure (PSIPRED)
cccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccEccccccccccccHHHHHHHHHHHHEEccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccHcHHccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccHHHccccEEcccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHcccccccccccccccccccEEcccccEEccccccHHHHcccccHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mapmylnpaqdhsdpfRLAEAQKRDHQRLQVLhssshnrpaasvsrpiflnsstqdqgmiklegsqqhdqkidqriagggssdlqssmsqpktmtNKLAIRRrevgegstsdnssytssssgesmSSKMRLANKIinsssvstgthdESVKVAEKLLHehdnievhyfttnssnsnntvricsdcnttttplwrsgprgpkslcnacGIRQRKARKAMQAAAEsgtttakdnssfSKIKlqnnmekkprtshvaqykkvqcntpdpdpphheyrsqrkLCFKDFAlslssnsalkqvfpRDVEEAAILLMELSCGFSHT
Flexible Loop (DISEMBL)
mapmylnpaqdhsDPFRLAEAQKRDHQRLQVLhssshnrpaasvsrPIFLNSSTQDQGMIKLEGSQQHDQKIDQRIAGGgssdlqssmsqpktmtnklairrrevgegstsdnssytssssgesmSSKMRLANKIInsssvstgthDESVKVAEKLLHEHDNIEVHyfttnssnsnntVRICSDCNTtttplwrsgprgpkslCNACGIRQRKARKAMQAAAesgtttakdnssfskiklqnnmekkprtshVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Low Complexity Region (SEG)
MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPIFLNSSTQDQGMIKLEGSQQHDQKIDQRIAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGstsdnssytssssgesmssKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFttnssnsnntVRICSDCNTTTTPLWRSGPRGPKSLCNACGIrqrkarkamqaaaESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Disordered region (IsUnstruct)
*********************************************************************************************************************************************************EKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWR********LCNACG*********************************************************************KLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCG****
Disordered Region (DISOPRED)
***************************************************************************************************************************************************************************************DCNTTTTPLWRSGPRGPKSLCNACGIRQ*********************************************************************************************AAILLMELSCGFSHT
Disordered Region (DISEMBL)
********AQDHSDPFRLAEAQKRDHQRLQVL**********SVSRPIFLNSSTQDQGMIKLEGSQQHDQKIDQRIAG****************TNKLAIRRR*************************MRLANKIINSS*********SVKVAEKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGI************************SFSKIKLQNN************YKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Disordered Region (DISPRO)
*********QDHSDPFRLAEAQKRDHQRLQVLHSS******ASVSRPIFLNSSTQDQGM*K******HD***********************************************************************************************************NTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESG**************************************************QRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPIFLNSSTQDQGMIKLEGSQQHDQKIDQRIAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGSTSDNSSYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	319	2.2.26 [Sep-21-2011]
Q9SZI6	352	Putative GATA transcripti	yes	no	0.786	0.713	0.353	5e-22
Q5HZ36	398	GATA transcription factor	no	no	0.429	0.344	0.390	2e-17
Q8LC59	120	GATA transcription factor	no	no	0.159	0.425	0.568	7e-13
Q9FJ10	139	GATA transcription factor	no	no	0.147	0.338	0.595	3e-12
Q8LG10	149	GATA transcription factor	no	no	0.181	0.389	0.517	1e-11
Q6QPM2	211	GATA transcription factor	no	no	0.169	0.255	0.551	1e-11
Q8VZP4	308	GATA transcription factor	no	no	0.147	0.152	0.595	4e-11
Q8LC79	295	GATA transcription factor	no	no	0.134	0.145	0.651	5e-11
Q6DBP8	303	GATA transcription factor	no	no	0.147	0.155	0.595	5e-11
Q9LIB5	190	GATA transcription factor	no	no	0.128	0.215	0.682	8e-11

>sp|Q9SZI6|GAT22_ARATH Putative GATA transcription factor 22 OS=Arabidopsis thaliana GN=GATA22 PE=2 SV=1

 Score =  105 bits (262), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/308 (35%), Positives = 148/308 (48%), Gaps = 57/308 (18%)

Query: 49  FLNSSTQDQGMIKLEGSQQHD-------QKIDQRIAGGGSSDLQSSMSQPKTMTN-KLAI 100
           FL +S QDQ  +    +  HD       Q ++ +          S    PK  T  KL I
Sbjct: 63  FLINSRQDQVYVGYNNNTFHDVLDTHISQPLETKNFVSDGGSSSSDQMVPKKETRLKLTI 122

Query: 101 RRREVGEGST----SDNSSYTSSSSGESMSSKMRLANK---IINSSSVST--GTHDESVK 151
           ++++  +  T    S     T ++S + +SSK+RL  K   II +S  S     +D+S  
Sbjct: 123 KKKDNHQDQTDLPQSPIKDMTGTNSLKWISSKVRLMKKKKAIITTSDSSKQHTNNDQSSN 182

Query: 152 VAEKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQ 211
           ++        N E      N  N++  +RICSDCNTT TPLWRSGPRGPKSLCNACGIRQ
Sbjct: 183 LS--------NSERQ----NGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQ 230

Query: 212 RKARKAMQAAAE----SGTTTAKDNSS--------------FSKIKLQNNMEKKPRT--- 250
           RKAR+A  A A     SG +                      S + L+ N  K+  T   
Sbjct: 231 RKARRAAMATATATAVSGVSPPVMKKKMQNKNKISNGVYKILSPLPLKVNTCKRMITLEE 290

Query: 251 SHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLM 310
           + +A+  + Q N+           S   + F D AL LS +SA +QVFP+D +EAAILLM
Sbjct: 291 TALAEDLETQSNST-------MLSSSDNIYFDDLALLLSKSSAYQQVFPQDEKEAAILLM 343

Query: 311 ELSCGFSH 318
            LS G  H
Sbjct: 344 ALSHGMVH 351

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.
Arabidopsis thaliana (taxid: 3702)

>sp|Q5HZ36|GAT21_ARATH GATA transcription factor 21 OS=Arabidopsis thaliana GN=GATA21 PE=1 SV=2

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 84/169 (49%), Gaps = 32/169 (18%)

Query: 76  IAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGSTSDNSSYT---SSSSGESMSSKMRLA 132
           +A GGSS     + + +T   KL IR+++  +     + + T   S S    MS KMRL 
Sbjct: 96  VANGGSSACDHMVPKKETRL-KLTIRKKDHEDQPHPLHQNPTKPDSDSDKWLMSPKMRLI 154

Query: 133 NKIINSSS-----VSTGTHDESVKVA-------EKLLHEHDNI-------------EVHY 167
            K I ++       +   H ES           ++  HE  N              E  Y
Sbjct: 155 KKTITNNKQLIDQTNNNNHKESDHYPLNHKTNFDEDHHEDLNFKNVLTRKTTAATTENRY 214

Query: 168 FTTNS---SNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 213
            T N    SN+N  +R+CSDCNTT TPLWRSGPRGPKSLCNACGIRQRK
Sbjct: 215 NTINENGYSNNNGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK 263

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LC59|GAT23_ARATH GATA transcription factor 23 OS=Arabidopsis thaliana GN=GATA23 PE=2 SV=2

 Score = 75.1 bits (183), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 35/51 (68%)

Query: 167 YFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKA 217
           Y +        T+R CS+C TT TP+WR GP GPKSLCNACGIR RK R++
Sbjct: 13  YVSVRMKEEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRS 63

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FJ10|GAT16_ARATH GATA transcription factor 16 OS=Arabidopsis thaliana GN=GATA16 PE=2 SV=1

 Score = 72.8 bits (177), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 36/47 (76%)

Query: 171 NSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKA 217
           N+++ N+  + C+DC T+ TPLWR GP GPKSLCNACGIR RK R+ 
Sbjct: 27  NNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRG 73

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LG10|GAT15_ARATH GATA transcription factor 15 OS=Arabidopsis thaliana GN=GATA15 PE=2 SV=2

 Score = 71.2 bits (173), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 40/58 (68%)

Query: 161 DNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAM 218
           D IE H  ++++   +N  + C+ C T+ TPLWR GP GPKSLCNACGIR RK R+ +
Sbjct: 22  DAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTL 79

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6QPM2|GAT19_ARATH GATA transcription factor 19 OS=Arabidopsis thaliana GN=GATA19 PE=2 SV=2

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 4/58 (6%)

Query: 176 NNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIR----QRKARKAMQAAAESGTTTA 229
           N   R C++C+TT+TPLWR+GPRGPKSLCNACGIR    +R+A  A  + +  G+T A
Sbjct: 71  NLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASTARNSTSGGGSTAA 128

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VZP4|GAT10_ARATH GATA transcription factor 10 OS=Arabidopsis thaliana GN=GATA10 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 33/47 (70%)

Query: 169 TTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 215
           T  SS S+  VRIC+ C T TTP WR GP GPK+LCNACG+R +  R
Sbjct: 207 TLESSKSDGIVRICTHCETITTPQWRQGPSGPKTLCNACGVRFKSGR 253

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LC79|GAT18_ARATH GATA transcription factor 18 OS=Arabidopsis thaliana GN=GATA18 PE=2 SV=2

 Score = 68.9 bits (167), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 35/43 (81%)

Query: 179 VRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAA 221
            R C++C+TT+TPLWR+GPRGPKSLCNACGIR +K  +   AA
Sbjct: 151 ARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRTTAA 193

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP8|GAT11_ARATH GATA transcription factor 11 OS=Arabidopsis thaliana GN=GATA11 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 33/47 (70%)

Query: 169 TTNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 215
           T  +SNS+  VR C+ C TT TP WR GP GPK+LCNACG+R R  R
Sbjct: 209 TLEASNSDGIVRKCTHCETTKTPQWREGPSGPKTLCNACGVRFRSGR 255

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LIB5|GAT17_ARATH GATA transcription factor 17 OS=Arabidopsis thaliana GN=GATA17 PE=2 SV=1

 Score = 68.2 bits (165), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 31/41 (75%)

Query: 177 NTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKA 217
           +T R C DC T  TPLWR GP GPKSLCNACGI+ RK R+A
Sbjct: 39  DTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQA 79

Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
118487597	303	unknown [Populus trichocarpa]	0.931	0.980	0.455	2e-48
225429550	306	PREDICTED: putative GATA transcription f	0.921	0.960	0.410	5e-44
118489347	303	unknown [Populus trichocarpa x Populus d	0.934	0.983	0.450	3e-41
224088836	234	predicted protein [Populus trichocarpa]	0.717	0.978	0.475	6e-41
118488977	306	unknown [Populus trichocarpa x Populus d	0.940	0.980	0.446	4e-40
255550794	186	conserved hypothetical protein [Ricinus	0.576	0.989	0.538	1e-35
356554076	306	PREDICTED: putative GATA transcription f	0.815	0.849	0.409	3e-35
255546095	312	hypothetical protein RCOM_1046780 [Ricin	0.818	0.836	0.392	8e-35
147805325	211	hypothetical protein VITISV_032017 [Viti	0.626	0.947	0.432	2e-29
356556282	315	PREDICTED: putative GATA transcription f	0.601	0.609	0.409	1e-28

>gi|118487597|gb|ABK95624.1| unknown [Populus trichocarpa]

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/325 (45%), Positives = 186/325 (57%), Gaps = 28/325 (8%)

Query: 1   MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPI-FLNSSTQD-QG 58
           M P YLNPA   S PF       R+ Q LQ+  S   ++ A S+S P  F N+S  D Q 
Sbjct: 1   MTPAYLNPASS-SFPF----VDLREEQNLQLFLSP--HQAATSLSGPTNFFNTSAHDHQR 53

Query: 59  MIKLEGSQQHD-QKIDQ-RIAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGSTSDNSSY 116
             K   S+QHD Q++D   I+ GGSS    S  QP+   +        +      D +  
Sbjct: 54  ETKPGESRQHDNQEVDMYNISHGGSS----SSFQPEVNDHNYNSNFHNLSSSKMEDGAEE 109

Query: 117 TSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNSN 176
           +  SS + M SKMRL  K+ NS+   T            +L  H+    +    +SSNSN
Sbjct: 110 SGESSVKWMPSKMRLMQKMTNSNCSETDHMPMKF-----MLKFHNQQYQNNEINSSSNSN 164

Query: 177 NTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK--ARKAMQAAAESGTTTAKDNSS 234
           + +R+CSDCNTT+TPLWRSGPRGPKSLCNACGIRQRK     A  AAA +GT  A + SS
Sbjct: 165 SNIRVCSDCNTTSTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAANGTVIAIEASS 224

Query: 235 FSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSAL 294
            ++    NN  KK RT+HV+Q KK+        PP    +SQ+KLCFK+ ALSLS N AL
Sbjct: 225 STRSTKVNNKVKKSRTNHVSQNKKLS------KPPESSLQSQKKLCFKNLALSLSKNPAL 278

Query: 295 KQVFPRDVEEAAILLMELSCGFSHT 319
           +QV P DVEEAAILLMELSCGF H+
Sbjct: 279 QQVLPHDVEEAAILLMELSCGFIHS 303

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429550|ref|XP_002279283.1| PREDICTED: putative GATA transcription factor 22 [Vitis vinifera] gi|296081660|emb|CBI20665.3| unnamed protein product [Vitis vinifera]

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 136/331 (41%), Positives = 184/331 (55%), Gaps = 37/331 (11%)

Query: 1   MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPI--FLNSSTQDQ- 57
           M P++LN +   S PF   E  K DHQ  Q+L S++     AS S P   F NSSTQ Q 
Sbjct: 1   MTPVFLNTSS--SSPFPALEL-KEDHQHFQLLFSTNPPSYQASSSHPCPSFFNSSTQSQR 57

Query: 58  GMIKLEGSQQHDQKIDQRIAGGGSSDLQ----SSMSQPKTMTNK----LAIRRREVGEGS 109
           G       QQH+ K D+ I+ GG  + Q    SS+ QP    NK    L++ ++E G+  
Sbjct: 58  GDHSPRDPQQHEDKDDKYISHGGCGESQVFSSSSLLQPMADDNKSSHKLSVFKKEEGDEG 117

Query: 110 TSDNSSYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFT 169
                 +        MSSKMRL  K++NS   +        K+ +K+        ++ F 
Sbjct: 118 NKSTEKW--------MSSKMRLMRKMMNSDCTT-------AKIEQKVEDHQQWDNINEFN 162

Query: 170 TNSSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTA 229
           ++++ SN  +R+CSDCNTT TPLWRSGPRGPKSLCNACGIRQRKAR+AM AAA +     
Sbjct: 163 SSNNTSNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAAANGT 222

Query: 230 KDNSSFSKIKLQ-NNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSL 288
              +  S +K++  N EKK  TS+V Q KK+               +++KLCF+DF  S+
Sbjct: 223 AVGTEISPMKMKLPNKEKKMHTSNVGQQKKLCKPP-------CPPPTEKKLCFEDFTSSI 275

Query: 289 SSNSALKQVFPRDVEEAAILLMELSCGFSHT 319
             NS  ++VFPRD EEAAILLM LSC   ++
Sbjct: 276 CKNSGFRRVFPRDEEEAAILLMALSCDLVYS 306

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489347|gb|ABK96478.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 146/324 (45%), Positives = 191/324 (58%), Gaps = 26/324 (8%)

Query: 1   MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPIFLNSSTQDQGMI 60
           M P+YLNPA   S PF       ++ Q LQ+  S   ++ A S+S P    ++T DQ   
Sbjct: 1   MTPVYLNPASS-SFPF----VDLKEEQHLQLFLSP--HQAATSLSGPTNFFNTTHDQRES 53

Query: 61  KLEGSQQHD-QKIDQR-IAGGGSSD---LQSSMSQPKTMTNKLAIRRREVGEGSTSDNSS 115
           KL  S+QHD  ++D+  I+ G SSD     SS  QP    +       ++    T D + 
Sbjct: 54  KLAESRQHDDHEVDKYSISLGRSSDHKLFPSSSFQPVVNDDDDDSNFHKLFSSKTEDGTE 113

Query: 116 YTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNS 175
            +  SS   M S+M    ++ NS+        E+     K + +  N +       +S+S
Sbjct: 114 GSGDSSVNWMPSRMTTMQEMSNSN------RSETDHQPMKFMLKFHNQQCQN-NDINSSS 166

Query: 176 NNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSF 235
           N+ +R+CSDCNTT+TPLWRSGPRGPKSLCNACGIRQRKAR+A  AAAE+G   + + SS 
Sbjct: 167 NSNIRVCSDCNTTSTPLWRSGPRGPKSLCNACGIRQRKARRA-MAAAENGAVISVEASS- 224

Query: 236 SKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALK 295
           S     N+  KK RTSHV Q KK+  N P P+PP    +SQ+KLCFK+ ALSLS N AL+
Sbjct: 225 STKSKVNSKVKKLRTSHVVQGKKLS-NKP-PNPP---LQSQKKLCFKNLALSLSKNPALR 279

Query: 296 QVFPRDVEEAAILLMELSCGFSHT 319
           QV P DVEEAAILLMELSCGF H+
Sbjct: 280 QVLPHDVEEAAILLMELSCGFIHS 303

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088836|ref|XP_002308561.1| predicted protein [Populus trichocarpa] gi|222854537|gb|EEE92084.1| predicted protein [Populus trichocarpa]

 Score =  174 bits (440), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/246 (47%), Positives = 146/246 (59%), Gaps = 17/246 (6%)

Query: 76  IAGGGSSDLQSSMSQPKTMTNKLAIRRREVGEGSTSDNSSYTSSSSGESMSSKMRLANKI 135
           I+ GGSS    S  QP+   +        +      D +  +  SS + M SKMRL  K+
Sbjct: 4   ISHGGSS----SSFQPEVNDHNYNSNFHNLSSSKMEDGAEESGESSVKWMPSKMRLMQKM 59

Query: 136 INSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNSNNTVRICSDCNTTTTPLWRS 195
            NS+   T            +L  H+    +    +SSNSN+ +R+CSDCNTT+TPLWRS
Sbjct: 60  TNSNCSETDHMPMKF-----MLKFHNQQYQNNEINSSSNSNSNIRVCSDCNTTSTPLWRS 114

Query: 196 GPRGPKSLCNACGIRQRK--ARKAMQAAAESGTTTAKDNSSFSKIKLQNNMEKKPRTSHV 253
           GPRGPKSLCNACGIRQRK     A  AAA +GT  A + SS ++    NN  KK RT+HV
Sbjct: 115 GPRGPKSLCNACGIRQRKARRAMAAAAAAANGTVIAIEASSSTRSTKVNNKVKKSRTNHV 174

Query: 254 AQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELS 313
           +Q KK+        PP    +SQ+KLCFK+ ALSLS N AL+QV P DVEEAAILLMELS
Sbjct: 175 SQNKKLS------KPPESSLQSQKKLCFKNLALSLSKNPALQQVLPHDVEEAAILLMELS 228

Query: 314 CGFSHT 319
           CGF H+
Sbjct: 229 CGFIHS 234

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488977|gb|ABK96296.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 145/325 (44%), Positives = 192/325 (59%), Gaps = 25/325 (7%)

Query: 1   MAPMYLNPAQDHSDPFRLAEAQKRDHQRLQVLHSSSHNRPAASVSRPIFLNSSTQDQGMI 60
           M P+YLNPA   S PF       ++ Q LQ+  S   ++ A S+S P    ++T DQ   
Sbjct: 1   MTPVYLNPASS-SFPF----VDLKEEQHLQLFLSP--HQAATSLSGPTNFFNTTHDQRES 53

Query: 61  KLEGSQQHD-QKIDQR-IAGGGSSD---LQSSMSQPKTMTNKLAIRR-REVGEGSTSDNS 114
           KL  S+QHD  ++D+  I+ G SSD     SS  QP    +        ++    T D +
Sbjct: 54  KLAESRQHDDHEVDKYSISLGRSSDHKLFPSSSFQPVVNDDDDDDSNFHKLFSSKTEDGT 113

Query: 115 SYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSN 174
             +  SS   M S+M    ++  S+   + T  + +K    +L  H+    +     +S+
Sbjct: 114 EGSGDSSVNWMPSRMTTMQEMTTSNR--SETDHQPMKF---MLKFHNQQCQNNVNDINSS 168

Query: 175 SNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSS 234
           SN+ +R+CSDCNTT+TPLWRSGPRGPKSLCNACGIRQRKAR+A  AAAE+G   + + SS
Sbjct: 169 SNSNIRVCSDCNTTSTPLWRSGPRGPKSLCNACGIRQRKARRA-MAAAENGAVISVEASS 227

Query: 235 FSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSAL 294
            S     N+  KK RTSHV Q KK+  N P P+PP    +SQ+KLCFK+ ALSLS N  L
Sbjct: 228 -STKSKVNSKVKKLRTSHVVQGKKLS-NKP-PNPP---LQSQKKLCFKNLALSLSKNPVL 281

Query: 295 KQVFPRDVEEAAILLMELSCGFSHT 319
           +QV P DVEEAAILLMELSCGF H+
Sbjct: 282 RQVLPHDVEEAAILLMELSCGFIHS 306

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550794|ref|XP_002516445.1| conserved hypothetical protein [Ricinus communis] gi|223544265|gb|EEF45786.1| conserved hypothetical protein [Ricinus communis]

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/195 (53%), Positives = 131/195 (67%), Gaps = 11/195 (5%)

Query: 125 MSSKMRLANKIINSSSVSTGTHDESVKVAEKLL-HEHDNIEVHYFTTNSSNSNNTVRICS 183
           M SKMR+  K++NS+      +D+ VK   K   H+      +   ++ SN NN +R+CS
Sbjct: 1   MPSKMRIMQKMMNSNCFEF--NDKPVKFTVKFQDHQQYQATNNEINSSCSNGNNNIRVCS 58

Query: 184 DCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIKLQNN 243
           DCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR+AM AAA     T+   +  +K+K    
Sbjct: 59  DCNTTTTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAIAMETSSTKA--AKVK---- 112

Query: 244 MEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSALKQVFPRDVE 303
            EKK RT H +Q KK+ C  PD  PP +    + K+ FK+ ALSLS+NSAL++VFP DVE
Sbjct: 113 -EKKSRTGHASQCKKL-CKPPDHPPPPYNQGQKPKVSFKNLALSLSNNSALQRVFPEDVE 170

Query: 304 EAAILLMELSCGFSH 318
           EAA LLMELSCGF H
Sbjct: 171 EAATLLMELSCGFIH 185

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554076|ref|XP_003545375.1| PREDICTED: putative GATA transcription factor 22-like [Glycine max]

 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/283 (40%), Positives = 160/283 (56%), Gaps = 23/283 (8%)

Query: 49  FLNSSTQDQGMIKLEGSQQHDQKIDQRIA--GGGSSDLQSSMSQPKT--MTNKL--AIRR 102
           F N     Q  I++ G +++ ++ D+ I   G  S+   S    P+T  M + L  A  R
Sbjct: 33  FFNIFDPRQTSIEIGGLRENYRQDDKMILHDGSSSNCNSSFNISPETVVMVDPLSSACDR 92

Query: 103 REVGEGSTSDNSSYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDN 162
           R +     S N+ +   S  + MSSKMRL  K++  S   + T D+++  + +    H  
Sbjct: 93  RNLPSEEESKNNDH--GSGNKWMSSKMRLMKKMMRPSI--SPTTDKAINSSPRF-QNHQG 147

Query: 163 IEVHYFTTNSSNSNN---TVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQ 219
           +E   ++  S  +NN   T R+CSDCNT+TTPLWR+GP+GPKSLCNACGIRQRKAR+AM 
Sbjct: 148 LESRRYSQRSPRNNNGSSTPRVCSDCNTSTTPLWRTGPKGPKSLCNACGIRQRKARRAMA 207

Query: 220 AAAESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYK-KVQCNTPDPDPPHHEYRSQRK 278
            AA    T      +  K +L N  EKK R +H AQ+K K +  T             RK
Sbjct: 208 EAANGLVTPI----ACEKTRLHNK-EKKSRMNHFAQFKNKYKSTTTTTTTTVGSSEGVRK 262

Query: 279 L-CFKDFALSL-SSNSALKQVFPRD-VEEAAILLMELSCGFSH 318
           L  F +FA+SL S+NS  +Q+FPRD V EAA+LLM+LSCGF H
Sbjct: 263 LEYFNNFAISLRSNNSDFEQMFPRDEVAEAALLLMDLSCGFVH 305

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546095|ref|XP_002514107.1| hypothetical protein RCOM_1046780 [Ricinus communis] gi|223546563|gb|EEF48061.1| hypothetical protein RCOM_1046780 [Ricinus communis]

 Score =  153 bits (387), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/278 (39%), Positives = 155/278 (55%), Gaps = 17/278 (6%)

Query: 47  PIFLNSSTQDQGMIKLEGSQQHDQKIDQRIAGGGSSDLQSSMSQPKTMTNKLAIRRREVG 106
           PIF+N   ++ G    E    H Q++D   A  G S     +        +L++ ++E  
Sbjct: 45  PIFINPPQEEVGYYHKELQPLHHQEVDNIYASHGRSWDHRIIKNENENGQELSVCKKEDK 104

Query: 107 EGSTSDNSSYTSSSSGESMSSKMRLANKIINSS-SVSTGTHDESV-KVAEKLLHEHDNIE 164
             S  D      +SS + MSSKMRL  K++ +  +V+T  H  S+ K+ +K       ++
Sbjct: 105 STSIEDQRD---NSSVKWMSSKMRLMRKMMTTDQTVNTTQHTSSMHKLEDKEKSRSLPLQ 161

Query: 165 VHYFTTN-SSNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGI--RQRKARKAMQAA 221
             Y + N S NSNNT+R+CSDCNTT TPLWRSGPRGPKSLCNACGI  R+ +   A   A
Sbjct: 162 DDYSSKNLSDNSNNTIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRALAAAQA 221

Query: 222 AESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCF 281
           + +GT  A D ++    K+QN  EK+   SH+   K+ +              S++KLCF
Sbjct: 222 SANGTIFAPDTAAMKTNKVQNK-EKRTNNSHLPFKKRCKFTA-------QSRGSRKKLCF 273

Query: 282 KDFALS-LSSNSALKQVFPRDVEEAAILLMELSCGFSH 318
           +D + + LS NSA +Q+FP+D +EAAILLM LS G  H
Sbjct: 274 EDLSSTILSKNSAFQQLFPQDEKEAAILLMALSYGLVH 311

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147805325|emb|CAN63090.1| hypothetical protein VITISV_032017 [Vitis vinifera]

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/229 (43%), Positives = 134/229 (58%), Gaps = 29/229 (12%)

Query: 95  TNKLAIRRREVGEGSTSDNSSYTSSSSGESMSSKMRLANKIINSSSVSTGTHDESVKVAE 154
           ++KL++ ++E G+        +        MSSKMRL  K++NS        D +    E
Sbjct: 8   SHKLSVFKKEEGDEGNKSTEKW--------MSSKMRLMRKMMNS--------DCTTAKIE 51

Query: 155 KLLHEHDNIEVHYFTTNSSNSNNT-VRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 213
           + + +H   +      +S+N++N  +R+CSDCNTT TPLWRSGPRGPKSLCNACGIRQRK
Sbjct: 52  QKVEDHQQWDNINEXNSSNNTSNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRK 111

Query: 214 ---ARKAMQAAAESGTTTAKDNSSFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPH 270
              A  A  AAA +GT    + S   K+KL N  EKK  TS+V Q KK+         P 
Sbjct: 112 ARRAMAAAAAAAANGTAVGTEISPM-KMKLPNK-EKKMHTSNVGQQKKLC-------KPP 162

Query: 271 HEYRSQRKLCFKDFALSLSSNSALKQVFPRDVEEAAILLMELSCGFSHT 319
               +++KLCF+DF  S+  NS  ++VFPRD EEAAILLM LSC   ++
Sbjct: 163 CPPPTEKKLCFEDFTSSICKNSGFRRVFPRDEEEAAILLMALSCDLVYS 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556282|ref|XP_003546455.1| PREDICTED: putative GATA transcription factor 22-like [Glycine max]

 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 119/205 (58%), Gaps = 13/205 (6%)

Query: 121 SGESMSSKMRLANKIINSSSVSTGTHDESVKVAEKLLHEHDNIEVHYFTTNSSNSNN--- 177
           S + M  KMR+  +++ S    +   +  +  ++K+ +E  N  +    T+ SN N+   
Sbjct: 108 STKWMPLKMRMMRRLMVSDQTGSDDTEGMISNSQKIKYEEKNSPLSPLGTDDSNYNSSSN 167

Query: 178 ----TVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNS 233
               TVR+CSDC+TT TPLWRSGP+GPKSLCNACGIRQRK R+A+ AAA S  T   + +
Sbjct: 168 HSNITVRVCSDCHTTKTPLWRSGPKGPKSLCNACGIRQRKVRRAIAAAATSNGTNPVE-A 226

Query: 234 SFSKIKLQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSNSA 293
             S++K  N +  K   S     ++++ N          YR +R   F+D  + LS N A
Sbjct: 227 EKSQVKKGNTLHSKGMKSKTEGAQQMKKNR----KLGARYR-KRFGAFEDLTVRLSKNFA 281

Query: 294 LKQVFPRDVEEAAILLMELSCGFSH 318
           L+QVFP+D +EAAILLM LS G  H
Sbjct: 282 LQQVFPQDEKEAAILLMALSYGLLH 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	319
TAIR|locus:2120845	352	CGA1 "cytokinin-responsive gat	0.438	0.397	0.415	6.4e-26
TAIR|locus:2170277	398	GNC "GATA, nitrate-inducible,	0.097	0.077	0.903	2.1e-20
TAIR|locus:2148558	120	GATA23 "GATA transcription fac	0.097	0.258	0.741	1e-13
TAIR|locus:2155919	139	GATA16 "GATA transcription fac	0.094	0.215	0.733	1.3e-11
TAIR|locus:2083388	149	GATA15 "GATA transcription fac	0.175	0.375	0.482	1.9e-11
TAIR|locus:2093678	190	GATA17 "GATA transcription fac	0.413	0.694	0.326	9.3e-11
TAIR|locus:504955441	197	AT4G16141 [Arabidopsis thalian	0.094	0.152	0.733	1.9e-10
TAIR|locus:2115195	211	GATA19 "GATA transcription fac	0.094	0.142	0.8	2.4e-09
TAIR|locus:2077932	295	MNP "MONOPOLE" [Arabidopsis th	0.291	0.315	0.356	2.7e-09
TAIR|locus:2062095	208	GATA20 "GATA transcription fac	0.094	0.144	0.766	8.4e-09

TAIR|locus:2120845 CGA1 "cytokinin-responsive gata factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
 Identities = 64/154 (41%), Positives = 78/154 (50%)

Query:   179 VRICSDCNTTTTPLWRSGPRGPKSLCNACGI----XXXXXXXXXXXXXESGTTTAKDNSS 234
             +RICSDCNTT TPLWRSGPRGPKSLCNACGI                  SG +       
Sbjct:   198 IRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAMATATATAVSGVSPPVMKKK 257

Query:   235 F-SKIKLQNNMEK--KPRTSHVAQYKKV-----QCNTPDPDPPHHE--YRSQRKLCFKDF 284
               +K K+ N + K   P    V   K++          D +   +     S   + F D 
Sbjct:   258 MQNKNKISNGVYKILSPLPLKVNTCKRMITLEETALAEDLETQSNSTMLSSSDNIYFDDL 317

Query:   285 ALSLSSNSALKQVFPRDVEEAAILLMELSCGFSH 318
             AL LS +SA +QVFP+D +EAAILLM LS G  H
Sbjct:   318 ALLLSKSSAYQQVFPQDEKEAAILLMALSHGMVH 351

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=IEP

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0010187 "negative regulation of seed germination" evidence=IEP

GO:0010380 "regulation of chlorophyll biosynthetic process" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

TAIR|locus:2170277 GNC "GATA, nitrate-inducible, carbon metabolism-involved" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
 Identities = 28/31 (90%), Positives = 30/31 (96%)

Query:   179 VRICSDCNTTTTPLWRSGPRGPKSLCNACGI 209
             +R+CSDCNTT TPLWRSGPRGPKSLCNACGI
Sbjct:   229 IRVCSDCNTTKTPLWRSGPRGPKSLCNACGI 259

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0010255 "glucose mediated signaling pathway" evidence=IMP

GO:0051171 "regulation of nitrogen compound metabolic process" evidence=IEP;IMP

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=IEP

GO:0009910 "negative regulation of flower development" evidence=IMP

GO:0010187 "negative regulation of seed germination" evidence=IEP

GO:0010380 "regulation of chlorophyll biosynthetic process" evidence=IMP

GO:0010468 "regulation of gene expression" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2148558 GATA23 "GATA transcription factor 23" [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query:   179 VRICSDCNTTTTPLWRSGPRGPKSLCNACGI 209
             +R CS+C TT TP+WR GP GPKSLCNACGI
Sbjct:    25 IRCCSECKTTKTPMWRGGPTGPKSLCNACGI 55

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

GO:0048527 "lateral root development" evidence=IMP

TAIR|locus:2155919 GATA16 "GATA transcription factor 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
 Identities = 22/30 (73%), Positives = 25/30 (83%)

Query:   180 RICSDCNTTTTPLWRSGPRGPKSLCNACGI 209
             + C+DC T+ TPLWR GP GPKSLCNACGI
Sbjct:    36 KTCADCGTSKTPLWRGGPVGPKSLCNACGI 65

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2083388 GATA15 "GATA transcription factor 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 27/56 (48%), Positives = 30/56 (53%)

Query:   154 EKLLHEHDNIEVHYFXXXXXXXXXXVRICSDCNTTTTPLWRSGPRGPKSLCNACGI 209
             E  L   D IE H             + C+ C T+ TPLWR GP GPKSLCNACGI
Sbjct:    15 ESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGI 70

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

TAIR|locus:2093678 GATA17 "GATA transcription factor 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 9.3e-11, P = 9.3e-11
 Identities = 48/147 (32%), Positives = 65/147 (44%)

Query:   180 RICSDCNTTTTPLWRSGPRGPKSLCNACGIXXXXXXXXXXXX-XESGTTTAKDNSSFSKI 238
             R C DC T  TPLWR GP GPKSLCNACGI              E      K N + + +
Sbjct:    42 RTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCN-NDL 100

Query:   239 KLQNNMEKKPRTSHVAQYK-------KVQCNTPDPDPPHHEYRSQRKLCFKDFALSLSSN 291
              L +   KK + + V   K       K+ CN           +   K     F + +   
Sbjct:   101 NLDHRNAKKYKINIVDDGKIDIDDDPKI-CNNKRSSSSSSN-KGVSKFLDLGFKVPVMKR 158

Query:   292 SAL--KQVFPR--DVEEAAILLMELSC 314
             SA+  K+++ +  + E AA+LLM LSC
Sbjct:   159 SAVEKKRLWRKLGEEERAAVLLMALSC 185

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

TAIR|locus:504955441 AT4G16141 [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
 Identities = 22/30 (73%), Positives = 24/30 (80%)

Query:   180 RICSDCNTTTTPLWRSGPRGPKSLCNACGI 209
             + C DC T+ TPLWR GP GPKSLCNACGI
Sbjct:    37 KTCVDCGTSRTPLWRGGPAGPKSLCNACGI 66

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2115195 GATA19 "GATA transcription factor 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 24/30 (80%), Positives = 29/30 (96%)

Query:   180 RICSDCNTTTTPLWRSGPRGPKSLCNACGI 209
             R C++C+TT+TPLWR+GPRGPKSLCNACGI
Sbjct:    75 RRCANCDTTSTPLWRNGPRGPKSLCNACGI 104

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

TAIR|locus:2077932 MNP "MONOPOLE" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 36/101 (35%), Positives = 50/101 (49%)

Query:   180 RICSDCNTTTTPLWRSGPRGPKSLCNACGIXXXXXXXXXXXXXESGTTTAKDNSSFSKIK 239
             R C++C+TT+TPLWR+GPRGPKSLCNACGI             E  TT A  N+      
Sbjct:   152 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKE--------ERRTTAATGNTVVGAAP 203

Query:   240 LQNNMEKKPRTSHVAQYKKVQCNTPDPDPPHHEYRSQRKLC 280
             +Q +      + +   +     N  +  P  H + +QR  C
Sbjct:   204 VQTDQYGHHNSGYNNYHAATNNNNNNGTPWAHHHSTQRVPC 244

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;IEP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009909 "regulation of flower development" evidence=IGI

GO:0009790 "embryo development" evidence=IMP

GO:0048446 "petal morphogenesis" evidence=RCA

TAIR|locus:2062095 GATA20 "GATA transcription factor 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 8.4e-09, P = 8.4e-09
 Identities = 23/30 (76%), Positives = 28/30 (93%)

Query:   180 RICSDCNTTTTPLWRSGPRGPKSLCNACGI 209
             R C+ C+TT+TPLWR+GP+GPKSLCNACGI
Sbjct:    92 RRCASCDTTSTPLWRNGPKGPKSLCNACGI 121

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0013019801 SubName- Full=Putative uncharacterized protein; (234 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	319
smart00401	52	smart00401, ZnF_GATA, zinc finger binding to DNA c	6e-17
pfam00320	36	pfam00320, GATA, GATA zinc finger	4e-16
cd00202	54	cd00202, ZnF_GATA, Zinc finger DNA binding domain;	4e-13

>gnl|CDD|214648 smart00401, ZnF_GATA, zinc finger binding to DNA consensus sequence [AT]GATA[AG]

 Score = 73.2 bits (180), Expect = 6e-17
 Identities = 22/45 (48%), Positives = 28/45 (62%)

Query: 177 NTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAA 221
            + R CS+C TT TPLWR GP G K+LCNACG+  +K     +  
Sbjct: 1   GSGRSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGGLKRPL 45

Length = 52

>gnl|CDD|109380 pfam00320, GATA, GATA zinc finger

 Score = 70.4 bits (173), Expect = 4e-16
 Identities = 21/35 (60%), Positives = 25/35 (71%)

Query: 182 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK 216
           CS+C TT TPLWR GP G ++LCNACG+  RK   
Sbjct: 1   CSNCGTTKTPLWRRGPDGNRTLCNACGLYYRKHGL 35

This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. Length = 36

>gnl|CDD|238123 cd00202, ZnF_GATA, Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

 Score = 62.8 bits (153), Expect = 4e-13
 Identities = 21/33 (63%), Positives = 25/33 (75%)

Query: 181 ICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 213
            CS+C TTTTPLWR GP G  +LCNACG+  +K
Sbjct: 1   ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKK 33

Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	319
cd00202	54	ZnF_GATA Zinc finger DNA binding domain; binds spe	99.4
PF00320	36	GATA: GATA zinc finger; InterPro: IPR000679 Zinc f	99.35
smart00401	52	ZnF_GATA zinc finger binding to DNA consensus sequ	99.34
KOG1601	340	consensus GATA-4/5/6 transcription factors [Transc	98.56
COG5641	498	GAT1 GATA Zn-finger-containing transcription facto	97.83
KOG3554	693	consensus Histone deacetylase complex, MTA1 compon	81.65

>cd00202 ZnF_GATA Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

Probab=99.40  E-value=1.7e-13  Score=101.45  Aligned_cols=36  Identities=58%  Similarity=1.187  Sum_probs=33.1

Q ss_pred             ccccCCCCCCCccccCCCCCcccchHHHHHHHHhhh
Q 020987          181 ICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK  216 (319)
Q Consensus       181 ~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~k  216 (319)
                      .|+||++++||+||+||.|...|||||||||++.+.
T Consensus         1 ~C~~C~~~~Tp~WR~g~~~~~~LCNaCgl~~~k~~~   36 (54)
T cd00202           1 ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKKHGV   36 (54)
T ss_pred             CCCCCCCCCCcccccCCCCcchHHHHHHHHHHhcCC
Confidence            599999999999999998889999999999988763

>PF00320 GATA: GATA zinc finger; InterPro: IPR000679 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.35  E-value=2.2e-13  Score=93.09  Aligned_cols=34  Identities=56%  Similarity=1.235  Sum_probs=27.0

Q ss_pred             cccCCCCCCCccccCCCCCcccchHHHHHHHHhh
Q 020987          182 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR  215 (319)
Q Consensus       182 CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~  215 (319)
                      |++|++++||+||++|.|...|||+|||+|++.+
T Consensus         1 C~~C~tt~t~~WR~~~~g~~~LCn~Cg~~~kk~~   34 (36)
T PF00320_consen    1 CSNCGTTETPQWRRGPNGNRTLCNACGLYYKKYG   34 (36)
T ss_dssp             -TTT--ST-SSEEEETTSEE-EEHHHHHHHHHHS
T ss_pred             CcCCcCCCCchhhcCCCCCCHHHHHHHHHHHHhC
Confidence            8999999999999999997779999999998764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents GATA-type zinc fingers (Znf). A number of transcription factors (including erythroid-specific transcription factor and nitrogen regulatory proteins), specifically bind the DNA sequence (A/T)GATA(A/G) [] in the regulatory regions of genes. They are consequently termed GATA-binding transcription factors. The interactions occur via highly-conserved Znf domains in which the zinc ion is coordinated by 4 cysteine residues [, ]. NMR studies have shown the core of the Znf to comprise 2 irregular anti-parallel beta-sheets and an alpha-helix, followed by a long loop to the C-terminal end of the finger. The N-terminal part, which includes the helix, is similar in structure, but not sequence, to the N-terminal zinc module of the glucocorticoid receptor DNA-binding domain. The helix and the loop connecting the 2 beta-sheets interact with the major groove of the DNA, while the C-terminal tail wraps around into the minor groove. It is this tail that is the essential determinant of specific binding. Interactions between the Znf and DNA are mainly hydrophobic, explaining the preponderance of thymines in the binding site; a large number of interactions with the phosphate backbone have also been observed []. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0008270 zinc ion binding, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 3GAT_A 2GAT_A 1GAU_A 1GAT_A 1Y0J_A 1GNF_A 2L6Z_A 2L6Y_A 3DFV_D 3DFX_B ....

>smart00401 ZnF_GATA zinc finger binding to DNA consensus sequence [AT]GATA[AG]

Probab=99.34  E-value=4.1e-13  Score=98.37  Aligned_cols=40  Identities=55%  Similarity=1.098  Sum_probs=35.9

Q ss_pred             CCcccccCCCCCCCccccCCCCCcccchHHHHHHHHhhhh
Q 020987          178 TVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKA  217 (319)
Q Consensus       178 ~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~k~  217 (319)
                      ..+.|++|++++||+||+||.|...|||||||||++....
T Consensus         2 ~~~~C~~C~~~~T~~WR~g~~g~~~LCnaCgl~~~k~~~~   41 (52)
T smart00401        2 SGRSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGGL   41 (52)
T ss_pred             CCCCcCCCCCCCCCccccCCCCCCcEeecccHHHHHcCCC
Confidence            4678999999999999999999879999999999876543

>KOG1601 consensus GATA-4/5/6 transcription factors [Transcription]

Probab=98.56  E-value=3.3e-08  Score=84.30  Aligned_cols=37  Identities=68%  Similarity=1.399  Sum_probs=34.7

Q ss_pred             CcccccCCCCCCCccccCCCCCcccchHHHHHHHHhh
Q 020987          179 VRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR  215 (319)
Q Consensus       179 ~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~  215 (319)
                      ...|.+|+++.||+||+++.|+..+|||||+++++..
T Consensus       199 ~~~c~~~~~~~t~~~r~~~~g~~~~cnacgl~~k~~~  235 (340)
T KOG1601|consen  199 LRQCSNCGTTKTPLWRRGPEGPKSLCNACGLRYKKGG  235 (340)
T ss_pred             CcccCCCCCCCCcceecCCCCCccccccchhhhhhcC
Confidence            6899999999999999999998899999999998864

>COG5641 GAT1 GATA Zn-finger-containing transcription factor [Transcription]

Probab=97.83  E-value=7.1e-06  Score=83.78  Aligned_cols=39  Identities=46%  Similarity=1.027  Sum_probs=32.9

Q ss_pred             CCCcccccCCCCCCCccccCCC-----CCcccchHHHHHHHHhhh
Q 020987          177 NTVRICSDCNTTTTPLWRSGPR-----GPKSLCNACGIRQRKARK  216 (319)
Q Consensus       177 g~~~~CsnC~Tt~TPlWRrGP~-----G~~~LCNACGL~~kk~~k  216 (319)
                      ....+|.||.|+.||+|||+..     | -+|||||||+++.+..
T Consensus       156 ~~~~vc~Nc~t~stPlwrR~~~~~s~~~-n~lcnaCgl~~klhg~  199 (498)
T COG5641         156 NQPHVCSNCKTTSTPLWRRASSESSLPG-NNLCNACGLYLKLHGS  199 (498)
T ss_pred             cccchhccccccCCccccccccccccCC-ccccccccccccccCC
Confidence            3445999999999999999999     6 6899999999965443

>KOG3554 consensus Histone deacetylase complex, MTA1 component [Chromatin structure and dynamics]

Probab=81.65  E-value=1.5  Score=46.15  Aligned_cols=40  Identities=30%  Similarity=0.530  Sum_probs=31.6

Q ss_pred             CCCcccccCCCCCCCccc--cCCCCCcccchHHHHHHHHhhh
Q 020987          177 NTVRICSDCNTTTTPLWR--SGPRGPKSLCNACGIRQRKARK  216 (319)
Q Consensus       177 g~~~~CsnC~Tt~TPlWR--rGP~G~~~LCNACGL~~kk~~k  216 (319)
                      ..++.|.+|+|++.-+|-  -+|+-...||-.|=+||+|...
T Consensus       384 ~~g~~CEsC~ttqs~qWYsWGppnmqcrLCasCWiyWKKygG  425 (693)
T KOG3554|consen  384 QDGRACESCYTTQSLQWYSWGPPNMQCRLCASCWIYWKKYGG  425 (693)
T ss_pred             CCCCcccccccccccceeccCCCCccchhhHHHHHHHHHhcC
Confidence            347899999999999993  3444445689999999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	319
2vus_I	43	Crystal Structure Of Unliganded Nmra-Area Zinc Fing		2e-04

>pdb|2VUS|I Chain I, Crystal Structure Of Unliganded Nmra-Area Zinc Finger Complex Length = 43

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 182 CSDCNTTTTPLWRSGPRGPKSLCNACGI 209
           C++C T TTPLWR  P G + LCNACG+
Sbjct: 4   CTNCFTQTTPLWRRNPEG-QPLCNACGL 30

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	319
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	1e-13
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	8e-13
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	5e-11
3dfx_A	63	Trans-acting T-cell-specific transcription factor	4e-09
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	5e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans} Length = 71

 Score = 64.1 bits (156), Expect = 1e-13
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 173 SNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 213
           S+ N     CS+C+ T T  WR+        CNAC I QRK
Sbjct: 2   SHMNKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRK 42

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A Length = 46

 Score = 60.9 bits (148), Expect = 8e-13
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 180 RICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 213
           R C +C  T TPLWR    G   LCNACG+  + 
Sbjct: 5   RECVNCGATATPLWRRDRTG-HYLCNACGLYHKM 37

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I* Length = 43

 Score = 55.9 bits (135), Expect = 5e-11
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 180 RICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 213
             C++C T TTPLWR  P G + LCNACG+  + 
Sbjct: 2   TTCTNCFTQTTPLWRRNPEG-QPLCNACGLFLKL 34

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* Length = 63

 Score = 51.6 bits (123), Expect = 4e-09
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 173 SNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 213
           S +      C++C TTTT LWR    G   +CNACG+  + 
Sbjct: 1   SAARRAGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYKL 40

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A* Length = 66

 Score = 50.8 bits (121), Expect = 5e-09
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 173 SNSNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 213
           +   N    C++C T TTPLWR  P G + LCNACG+  + 
Sbjct: 3   NGEQNGPTTCTNCFTQTTPLWRRNPEG-QPLCNACGLFLKL 42

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 6e-04
 Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 15/106 (14%)

Query: 208 GIRQRKARKAMQAAAESGTTTAKDNSSF--SKIKLQNNMEKKPRTSHVAQYKKVQCNTPD 265
                K  + +Q   E      + N  F  S IK +          ++ Q  ++  N   
Sbjct: 69  WTLLSKQEEMVQKFVEEVL---RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL-YNDNQ 124

Query: 266 PDPPHHEYRSQRKLCFKDFALSLSSNSAL---------KQVFPRDV 302
               ++  R Q  L  +   L L     +         K     DV
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	319
3dfx_A	63	Trans-acting T-cell-specific transcription factor	99.7
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	99.62
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	99.51
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	99.49
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	99.48
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.46
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.14

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*

Probab=99.70  E-value=1.3e-17  Score=126.31  Aligned_cols=59  Identities=31%  Similarity=0.594  Sum_probs=48.1

Q ss_pred             CCCCCcccccCCCCCCCccccCCCCCcccchHHHHHHHHhhhhhHHHhhcCcccccCCCccccccc
Q 020987          175 SNNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIKL  240 (319)
Q Consensus       175 ~~g~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~k~~~aa~~ng~~~kke~~qstKrK~  240 (319)
                      +......|++|++++||+||+||+|+ +|||||||||++.+.      .++..+.+++++++++|+
T Consensus         3 ~~~~~~~C~~C~tt~Tp~WR~gp~G~-~LCNACGl~~~~~~~------~RP~~~~~~~i~~R~Rk~   61 (63)
T 3dfx_A            3 ARRAGTSCANCQTTTTTLWRRNANGD-PVCNACGLYYKLHNI------NRPLTMKKEGIQTRNRKM   61 (63)
T ss_dssp             CCCTTCCCTTTCCSCCSSCCCCTTSC-CCCHHHHHHHHHHSS------CCCGGGCCSSCCCCC---
T ss_pred             CCCCCCcCCCcCCCCCCccCCCCCCC-chhhHHHHHHHHcCC------CCCcCcCCCccccccCCC
Confidence            45678899999999999999999996 999999999988654      366778888888776665

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*

Probab=99.62  E-value=1.8e-16  Score=120.92  Aligned_cols=56  Identities=34%  Similarity=0.625  Sum_probs=45.3

Q ss_pred             CCCCcccccCCCCCCCccccCCCCCcccchHHHHHHHHhhhhhHHHhhcCcccccCCCccccc
Q 020987          176 NNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKI  238 (319)
Q Consensus       176 ~g~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~k~~~aa~~ng~~~kke~~qstKr  238 (319)
                      .+..+.|++|++++||+||+||+|. +|||||||||++....      ++..++++.|+.+++
T Consensus         6 ~~~~~~C~~C~t~~Tp~WR~gp~G~-~LCNaCGl~~~~~~~~------RP~~~k~~~ik~R~R   61 (66)
T 4gat_A            6 QNGPTTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLKLHGVV------RPLSLKTDVIKKRNR   61 (66)
T ss_dssp             SSSSCCCTTTCCCCCSSCEEETTTE-EECHHHHHHHHHHCSC------CCGGGCCSCCCCCCC
T ss_pred             CCCCCCCCCCCCCCCCcCCcCCCCC-CccHHHHHHHHHcCCC------Cchhhcccccccccc
Confidence            4678999999999999999999995 9999999999876543      566776666654443

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}

Probab=99.51  E-value=2.2e-15  Score=116.56  Aligned_cols=41  Identities=41%  Similarity=0.596  Sum_probs=32.1

Q ss_pred             CCCCcccccCCCCCCCccccCCCCCcccchHHHHHHHHhhh
Q 020987          176 NNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK  216 (319)
Q Consensus       176 ~g~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~k  216 (319)
                      ......|+||+|++||+||+|+.+..+|||||||||++...
T Consensus         5 ~~~~~~C~nC~tt~Tp~WRrg~~~~g~LCNACGl~~~~~~~   45 (71)
T 2kae_A            5 NKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNK   45 (71)
T ss_dssp             ---CCCCSSSCCSCCSSCCCCSSSSCCCSSHHHHHHHHHHS
T ss_pred             CCCCCcCCccCCCCCCccccCCCCCCccchHHHHHHHHhCC
Confidence            45678999999999999999543333899999999987654

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*

Probab=99.49  E-value=7.2e-15  Score=103.83  Aligned_cols=36  Identities=47%  Similarity=1.024  Sum_probs=32.8

Q ss_pred             cccccCCCCCCCccccCCCCCcccchHHHHHHHHhhh
Q 020987          180 RICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK  216 (319)
Q Consensus       180 ~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~k  216 (319)
                      +.|++|++++||+||+||+|. +|||||||||++.+.
T Consensus         2 ~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k~~~~   37 (43)
T 2vut_I            2 TTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLKLHGV   37 (43)
T ss_dssp             CCCSSSCCCCCSCCEECTTSC-EECHHHHHHHHHHSS
T ss_pred             CcCCccCCCCCCccccCCCCC-cccHHHHHHHHHhCC
Confidence            579999999999999999996 999999999987654

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A

Probab=99.48  E-value=1.3e-14  Score=103.98  Aligned_cols=38  Identities=42%  Similarity=0.957  Sum_probs=34.0

Q ss_pred             CCcccccCCCCCCCccccCCCCCcccchHHHHHHHHhhh
Q 020987          178 TVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK  216 (319)
Q Consensus       178 ~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~k  216 (319)
                      ..+.|++|++++||+||+||+|. +|||||||||++...
T Consensus         3 ~~~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k~~~~   40 (46)
T 1gnf_A            3 EARECVNCGATATPLWRRDRTGH-YLCNACGLYHKMNGQ   40 (46)
T ss_dssp             CSCCCTTTCCCCCSSCBCCTTCC-CBCSHHHHHHHHTCS
T ss_pred             CCCCCCCcCCCCCCcCccCCCCC-ccchHHHHHHHHcCC
Confidence            46789999999999999999995 999999999987543

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.46  E-value=3.1e-14  Score=118.03  Aligned_cols=57  Identities=32%  Similarity=0.592  Sum_probs=47.1

Q ss_pred             CCCCcccccCCCCCCCccccCCCCCcccchHHHHHHHHhhhhhHHHhhcCcccccCCCcccccc
Q 020987          176 NNTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIK  239 (319)
Q Consensus       176 ~g~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~k~~~aa~~ng~~~kke~~qstKrK  239 (319)
                      ......|++|+|+.||+||+||+| ++|||||||||++....      ++..++++.|+++++|
T Consensus        56 ~~~~~~C~~C~t~~tp~WRr~~~g-~~lCNaCgl~~~~~~~~------rp~~~~~~~i~~r~r~  112 (115)
T 4hc9_A           56 RRAGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYKLHNIN------RPLTMKKEGIQTRNRK  112 (115)
T ss_dssp             CCTTCCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHHHSSC------CCGGGCCSSCCCCC--
T ss_pred             ccccccCCCcCCCCcceeEECCCC-CCcchHHHHHHHHhCCC------CCccccccchhhcccc
Confidence            456789999999999999999999 89999999999876544      6688888888766554

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.14  E-value=2.1e-11  Score=101.13  Aligned_cols=37  Identities=43%  Similarity=0.952  Sum_probs=32.3

Q ss_pred             CCcccccCCCCCCCccccCCCCCcccchHHHHHHHHhh
Q 020987          178 TVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR  215 (319)
Q Consensus       178 ~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~  215 (319)
                      ..+.|+||++++||+||+|++| .+|||||||||+...
T Consensus         4 ~~~~C~~Cg~~~Tp~WRr~~~g-~~lCnaCgl~~Kl~G   40 (115)
T 4hc9_A            4 MGRECVNCGATSTPLWRRDGTG-HYLCNACGLYHKMNG   40 (115)
T ss_dssp             --CCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHHHS
T ss_pred             CCCCCCCCCCccCCcceECCCC-CCcCcchhhhhhhcc
Confidence            5789999999999999999999 799999999997543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	319
d1y0ja1	39	g.39.1.1 (A:200-238) Erythroid transcription facto	1e-12
d2vuti1	42	g.39.1.1 (I:671-712) Erythroid transcription facto	3e-10
d3gata_	66	g.39.1.1 (A:) Erythroid transcription factor GATA-	4e-08

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 39

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 59.3 bits (144), Expect = 1e-12
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 180 RICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 213
           R C +C  T TPLWR    G   LCNACG+  + 
Sbjct: 3   RECVNCGATATPLWRRDRTG-HYLCNACGLYHKM 35

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]} Length = 42

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

 Score = 52.5 bits (126), Expect = 3e-10
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 182 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 213
           C++C T TTPLWR  P G + LCNACG+  + 
Sbjct: 3   CTNCFTQTTPLWRRNPEG-QPLCNACGLFLKL 33

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 66

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 47.3 bits (112), Expect = 4e-08
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 180 RICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRK 213
            +CS+C T+TT LWR  P G   +CNACG+  + 
Sbjct: 5   TVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKL 37

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	319
d3gata_	66	Erythroid transcription factor GATA-1 {Chicken (Ga	99.69
d2vuti1	42	Erythroid transcription factor GATA-1 {Emericella	99.58
d1y0ja1	39	Erythroid transcription factor GATA-1 {Mouse (Mus	99.58

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.69  E-value=7.1e-18  Score=127.14  Aligned_cols=60  Identities=33%  Similarity=0.664  Sum_probs=48.3

Q ss_pred             CCCcccccCCCCCCCccccCCCCCcccchHHHHHHHHhhhhhHHHhhcCcccccCCCccccccccCC
Q 020987          177 NTVRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARKAMQAAAESGTTTAKDNSSFSKIKLQNN  243 (319)
Q Consensus       177 g~~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~k~~~aa~~ng~~~kke~~qstKrK~~~~  243 (319)
                      ..+.+|+||+|++||+||+||.| .+|||||||||++...      .++..+.++.++.+++++...
T Consensus         2 r~g~~C~nCgt~~Tp~WRr~~~G-~~lCNACGl~~~~~~~------~RP~~~~~~~i~~r~r~~~~~   61 (66)
T d3gata_           2 RAGTVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKLHQV------NRPLTMRKDGIQTRNRKVSSK   61 (66)
T ss_dssp             CTTCCCTTTCCCCCSSEEECTTS-CEEEHHHHHHHHHHCS------CCCGGGCCSSCCCCSCCCCCC
T ss_pred             CCCCCCCCCCCCCCcccccCCCC-CcccchhHHHHHHhCC------cCCccccccccccccCCCCCc
Confidence            35678999999999999999999 7999999999987543      356777788887766665433

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

Probab=99.58  E-value=2.9e-16  Score=109.29  Aligned_cols=35  Identities=49%  Similarity=1.071  Sum_probs=32.0

Q ss_pred             ccccCCCCCCCccccCCCCCcccchHHHHHHHHhhh
Q 020987          181 ICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKARK  216 (319)
Q Consensus       181 ~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~k  216 (319)
                      .|+||++++||+||+||+| ++|||||||||++...
T Consensus         2 ~C~nC~tt~Tp~WRr~~~G-~~lCNACGl~~k~~g~   36 (42)
T d2vuti1           2 TCTNCFTQTTPLWRRNPEG-QPLCNACGLFLKLHGV   36 (42)
T ss_dssp             CCSSSCCCCCSCCEECTTS-CEECHHHHHHHHHHSS
T ss_pred             cCCCCCCCCCccceeCCCC-CCchhhhhHHHHHcCC
Confidence            6999999999999999999 7999999999976543

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.58  E-value=2.3e-16  Score=108.28  Aligned_cols=36  Identities=44%  Similarity=1.013  Sum_probs=32.9

Q ss_pred             CcccccCCCCCCCccccCCCCCcccchHHHHHHHHhh
Q 020987          179 VRICSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR  215 (319)
Q Consensus       179 ~~~CsnC~Tt~TPlWRrGP~G~~~LCNACGL~~kk~~  215 (319)
                      .+.|++|++++||+||+||.| .+|||||||||++..
T Consensus         2 ~r~C~~Cgtt~Tp~WR~gp~G-~~LCNACGl~~r~~G   37 (39)
T d1y0ja1           2 ARECVNCGATATPLWRRDRTG-HYLCNACGLYHKMNG   37 (39)
T ss_dssp             CCCCSSSCCCCCSCCEECTTS-CEECSSHHHHHHHSC
T ss_pred             cCCCCCCCCCCCcccccCCCC-CEeeHHhHHHHHHhC
Confidence            578999999999999999999 689999999997653