BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020988
(319 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WPT7|Y2104_ARATH Uncharacterized methyltransferase At2g41040, chloroplastic
OS=Arabidopsis thaliana GN=At2g41040 PE=1 SV=1
Length = 352
Score = 341 bits (875), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 175/275 (63%), Positives = 208/275 (75%), Gaps = 19/275 (6%)
Query: 1 MAIAAAAASSSSSLFPKYPCLSRNSPRLPQS-----LRFSSTIR--------AVTLQPAK 47
MA+AA +SSS+ P L S LRFS++ A++ K
Sbjct: 1 MAMAALTSSSSAITLLNKPFLPNRSSFFSSDSQSPLLRFSASTSVRSRFPSAAISAVAPK 60
Query: 48 SE--RNQTLELEGD---LFSCPICYEPLIRKGPTGLTLGAIYRSGFKCRKCDKTYSSKDN 102
S+ +N+T ++E + +F+CP+CYEPL+RKGP+G+ L AIYRSGFKC +C+KTYSSKD
Sbjct: 61 SDINKNETPKIEIEETQVFACPVCYEPLMRKGPSGINLQAIYRSGFKCGQCNKTYSSKDE 120
Query: 103 YLDLTVISGLKDYTEVKPASTELFRSPFVSFLYERGWRQNFNRSGFPGPDEEFKMAQEYF 162
YLDLTV + L DY EVKP +TELFRSP VSFLYERGWRQ F RSGFPGPDEEF+MA+EYF
Sbjct: 121 YLDLTVTADLDDYNEVKPITTELFRSPLVSFLYERGWRQAFKRSGFPGPDEEFRMAEEYF 180
Query: 163 KSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS-NL 221
K A+GGLLVDVSCGSGLFSRKFA+SG YSGV+ALD+SENMLRQC +FIK DNT S N+
Sbjct: 181 KEAEGGLLVDVSCGSGLFSRKFAQSGKYSGVIALDYSENMLRQCKEFIKNDNTFDNSTNI 240
Query: 222 ALVRADVCRLPFASGFVDAVHAGAALHCWPSPSNA 256
A+VRADV RLPF SG VDAVHAGAALHCWPSP+NA
Sbjct: 241 AVVRADVSRLPFPSGSVDAVHAGAALHCWPSPTNA 275
>sp|Q8LBV4|Y1814_ARATH Uncharacterized methyltransferase At1g78140, chloroplastic
OS=Arabidopsis thaliana GN=At1g78140 PE=1 SV=1
Length = 355
Score = 239 bits (609), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 148/217 (68%), Gaps = 5/217 (2%)
Query: 47 KSERNQTLELEGDLFSCPICYEPLIR-KGPTGLTLGAIYRSGFKCRKCDKTYSSKDNYLD 105
K ++N+ E + +CPICY L P GL A +C C ++YS + +LD
Sbjct: 65 KKDKNRG---EKKILACPICYNSLAWISQPNGLIESAASGIQVQCNTCKRSYSGNETHLD 121
Query: 106 LTVISGLKDYTEVKPASTELFRSPFVSFLYERGWRQNFNRSGFPGPDEEFKMAQEYFKSA 165
L V SG K Y+E P STELFR+P VSFLYERGWRQNF GFPGP++EF+MA+ Y K
Sbjct: 122 LAVASGSKRYSEPMPLSTELFRTPLVSFLYERGWRQNFIWGGFPGPEKEFEMAKAYLKPV 181
Query: 166 QGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFI-KQDNTILTSNLALV 224
GG ++D SCGSG+FSR F +S +S V+ALD+SENMLRQCY+ + K++N L LV
Sbjct: 182 LGGNIIDASCGSGMFSRLFTRSDLFSLVIALDYSENMLRQCYELLNKEENFPNKEKLVLV 241
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPSPSNAASVFS 261
RAD+ RLPF SG VDAVHAGAALHCWPSPS+A + S
Sbjct: 242 RADIARLPFLSGSVDAVHAGAALHCWPSPSSAVAEIS 278
>sp|B9DNV5|UBIE_STACT Demethylmenaquinone methyltransferase OS=Staphylococcus carnosus
(strain TM300) GN=ubiE PE=3 SV=1
Length = 241
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY 190
+SF + WR+ +S + +G +DV CG+ ++ +K+
Sbjct: 29 ISFEQHKVWRKRVMKS---------------MQVKKGSKALDVCCGTADWTIALSKAVGP 73
Query: 191 SG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHC 249
SG V+ LDFSENML+ + ++ T SN+ LV+ D LPF D V G L
Sbjct: 74 SGEVIGLDFSENMLK-----VGEEKTKNMSNIQLVQGDAMDLPFDDNEFDYVTIGFGLRN 128
Query: 250 WPS 252
P
Sbjct: 129 IPD 131
>sp|O66128|UBIE_MICLU Demethylmenaquinone methyltransferase OS=Micrococcus luteus GN=ubiE
PE=3 SV=1
Length = 246
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 37/165 (22%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GT 189
+SF + WR+ + M Q K +G +DV CG+G ++ + A++ G
Sbjct: 38 ISFNQHKSWRK-------------YTMKQMNVK--KGSKALDVCCGTGDWTIQMAQAVGK 82
Query: 190 YSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHC 249
V+ LDFSENML + Q T N+ L+ + LPF D G L
Sbjct: 83 NGHVIGLDFSENMLS-----VAQGKTNHIQNIELIHGNAMELPFEDNIFDYTTIGFGLRN 137
Query: 250 WP-------------SPSNAASVFSSSYSLLSI---CYLLQFRYT 278
P P V +S+ + + Y L F+Y
Sbjct: 138 LPDYKKGLEEMYRVLKPGGMIVVLETSHPTMPVFKQGYKLYFKYV 182
>sp|Q24W96|UBIE_DESHY Demethylmenaquinone methyltransferase OS=Desulfitobacterium
hafniense (strain Y51) GN=ubiE PE=3 SV=1
Length = 253
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 18/124 (14%)
Query: 130 FVSFLYERGWRQNFNRSGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-G 188
+SF ++GWR K A + ++ G +VD+ CG+ S + A + G
Sbjct: 43 LMSFGLDKGWR---------------KKAVQTVEAKPGMTMVDICCGTAQLSLELAMTVG 87
Query: 189 TYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALH 248
+ LDFSENML++ + + + S + L + D LPFA D G L
Sbjct: 88 EQGQITGLDFSENMLKKAQENLA--GSPYRSIIELRQGDAMNLPFADNSFDGATVGWGLR 145
Query: 249 CWPS 252
P
Sbjct: 146 NLPD 149
>sp|Q6GGU0|UBIE_STAAR Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain MRSA252) GN=ubiE PE=3 SV=1
Length = 241
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G+ V +DFSENML + ++ T N+ LV
Sbjct: 49 KGMKALDVCCGTGDWTIALSKAVGSTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPD 131
>sp|Q4L6H3|UBIE_STAHJ Demethylmenaquinone methyltransferase OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ubiE PE=3 SV=1
Length = 239
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 167 GGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225
G +DV CG+ ++ +K+ G + V LDFSENML + ++ T +N+ LV
Sbjct: 50 GSKALDVCCGTADWTIALSKAVGAHGEVTGLDFSENMLE-----VGKEKTKHMNNIHLVH 104
Query: 226 ADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 105 GDAMNLPFEDNSFDYVTIGFGLRNVPD 131
>sp|Q2YY85|UBIE_STAAB Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=ubiE PE=3 SV=1
Length = 241
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFGDNSFDYVTIGFGLRNVPD 131
>sp|P67063|UBIE_STAAW Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain MW2) GN=ubiE PE=3 SV=1
Length = 241
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPD 131
>sp|A8Z450|UBIE_STAAT Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain USA300 / TCH1516) GN=ubiE PE=3 SV=1
Length = 241
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPD 131
>sp|Q6G992|UBIE_STAAS Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain MSSA476) GN=ubiE PE=3 SV=1
Length = 241
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPD 131
>sp|P67062|UBIE_STAAN Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain N315) GN=ubiE PE=1 SV=1
Length = 241
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPD 131
>sp|P67061|UBIE_STAAM Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=ubiE PE=1 SV=1
Length = 241
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPD 131
>sp|A6QH20|UBIE_STAAE Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain Newman) GN=ubiE PE=3 SV=1
Length = 241
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPD 131
>sp|Q5HFV2|UBIE_STAAC Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain COL) GN=ubiE PE=3 SV=1
Length = 241
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPD 131
>sp|A5ISZ9|UBIE_STAA9 Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain JH9) GN=ubiE PE=3 SV=1
Length = 241
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPD 131
>sp|A6U1T9|UBIE_STAA2 Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain JH1) GN=ubiE PE=3 SV=1
Length = 241
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPD 131
>sp|A7X2H6|UBIE_STAA1 Demethylmenaquinone methyltransferase OS=Staphylococcus aureus
(strain Mu3 / ATCC 700698) GN=ubiE PE=3 SV=1
Length = 241
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+G ++ +K+ G V +DFSENML + ++ T N+ LV
Sbjct: 49 KGTKALDVCCGTGDWTIALSKAVGPTGEVTGIDFSENMLE-----VGKEKTASMENVKLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
D LPF D V G L P
Sbjct: 104 HGDAMELPFEDNSFDYVTIGFGLRNVPD 131
>sp|Q5ZT34|BIOC_LEGPH Malonyl-CoA O-methyltransferase BioC OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=bioC PE=3 SV=2
Length = 284
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 160 EYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTS 219
+Y K A +L D+ CG G FS++ A + +V +D S ML Q +
Sbjct: 37 QYLKIAPRRIL-DLGCGPGFFSKELALLYPKAQIVGMDLSFAMLEQA-----RKKQGWRR 90
Query: 220 NLALVRADVCRLPFASGFVDAVHAGAALHCWPS 252
LV AD+ ++PFA+G D V A +H W S
Sbjct: 91 KWPLVSADMQKMPFATGAFDLVFANQVIH-WSS 122
>sp|Q49XS5|UBIE_STAS1 Demethylmenaquinone methyltransferase OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=ubiE PE=3 SV=1
Length = 233
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 21/123 (17%)
Query: 131 VSFLYERGWRQNFNRSGFPGPDEEFKMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTY 190
+SF + WR+ M + KS L DV CG+ ++ +K+ +
Sbjct: 29 ISFEQHKTWRKRV-------------MKEMNVKSGSKAL--DVCCGTADWTISLSKAVGH 73
Query: 191 SG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGAALHC 249
+G V+ +DFSENML + + T N+ LV D LPF D V G L
Sbjct: 74 TGEVIGVDFSENMLE-----VGKRKTKDMHNIQLVHGDAMNLPFEDNEFDYVTIGFGLRN 128
Query: 250 WPS 252
P
Sbjct: 129 VPD 131
>sp|A0AK43|UBIE_LISW6 Demethylmenaquinone methyltransferase OS=Listeria welshimeri
serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
GN=ubiE PE=3 SV=1
Length = 236
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDN 214
K + + +G ++DV CG+ +S A+ G V LDFSENML+ + +K+ +
Sbjct: 37 KETMKLMRVQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEAD 96
Query: 215 TILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWP 251
N+ L+ + LPF D V G L P
Sbjct: 97 ---LHNVELIHGNAMELPFPDNSFDYVTIGFGLRNVP 130
>sp|P67055|UBIE_LISMO Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=ubiE PE=3
SV=1
Length = 237
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDN 214
K + + +G ++DV CG+ +S A+ G V LDFSENML+ + +K+ +
Sbjct: 37 KETMKLMRVQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEAD 96
Query: 215 TILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWP 251
N+ L+ + LPF D V G L P
Sbjct: 97 ---LHNVELIHGNAMELPFPDNSFDYVTIGFGLRNVP 130
>sp|Q71Y84|UBIE_LISMF Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4b (strain F2365) GN=ubiE PE=3 SV=1
Length = 237
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDN 214
K + + +G ++DV CG+ +S A+ G V LDFSENML+ + +K+ +
Sbjct: 37 KETMKLMRVQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEAD 96
Query: 215 TILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWP 251
N+ L+ + LPF D V G L P
Sbjct: 97 ---LHNVELIHGNAMELPFPDNSFDYVTIGFGLRNVP 130
>sp|C1KWN1|UBIE_LISMC Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4b (strain CLIP80459) GN=ubiE PE=3 SV=1
Length = 237
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDN 214
K + + +G ++DV CG+ +S A+ G V LDFSENML+ + +K+ +
Sbjct: 37 KETMKLMRVQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEAD 96
Query: 215 TILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWP 251
N+ L+ + LPF D V G L P
Sbjct: 97 ---LHNVELIHGNAMELPFPDNSFDYVTIGFGLRNVP 130
>sp|P67056|UBIE_LISIN Demethylmenaquinone methyltransferase OS=Listeria innocua serovar
6a (strain CLIP 11262) GN=ubiE PE=3 SV=1
Length = 237
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDN 214
K + + +G ++DV CG+ +S A+ G V LDFSENML+ + +K+ +
Sbjct: 37 KETMKLMRVQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEAD 96
Query: 215 TILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWP 251
N+ L+ + LPF D V G L P
Sbjct: 97 ---LHNVELIHGNAMELPFPDNSFDYVTIGFGLRNVP 130
>sp|Q8CSH9|UBIE_STAES Demethylmenaquinone methyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=ubiE PE=3 SV=1
Length = 241
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+ ++ +++ G+ V LDFSENML + + T N+ LV
Sbjct: 49 KGSKALDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLE-----VGKQKTASLENIQLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWP 251
D LPF D V G L P
Sbjct: 104 HGDAMNLPFDDNSFDYVTIGFGLRNVP 130
>sp|Q5HP74|UBIE_STAEQ Demethylmenaquinone methyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=ubiE PE=3 SV=1
Length = 241
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+ ++ +++ G+ V LDFSENML + + T N+ LV
Sbjct: 49 KGSKALDVCCGTADWTIALSEAVGSKGQVTGLDFSENMLE-----VGKQKTASLENIQLV 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWP 251
D LPF D V G L P
Sbjct: 104 HGDAMNLPFDDNSFDYVTIGFGLRNVP 130
>sp|Q5EN22|ERG6_MAGO7 Sterol 24-C-methyltransferase OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=ERG6 PE=2 SV=2
Length = 390
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 130 FVSFLYERGWRQNFNRSGFPGPDEEFKMAQEYFKSA--------QGGLLVDVSCGSGLFS 181
V+ YE GW Q+F+ F P E F A ++ +G ++D+ CG G +
Sbjct: 91 LVTDFYEYGWGQSFHFCTF-APGETFASAITRYEHTLAHRIGIKKGMKVLDIGCGVGGPA 149
Query: 182 RKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAV 241
R+ AK T + + + +E + + + + + L V+ D LPF DAV
Sbjct: 150 RQIAKF-TGANITGITINEYQVERARRYAEMEGYGAGEQLKFVQGDFMALPFEKETFDAV 208
Query: 242 HA 243
++
Sbjct: 209 YS 210
>sp|B8DBZ5|UBIE_LISMH Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4a (strain HCC23) GN=ubiE PE=3 SV=1
Length = 237
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDN 214
K + + +G ++DV CG+ +S A+ G V LDFSENML+ + + + +
Sbjct: 37 KETMKLMRVQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVTEAD 96
Query: 215 TILTSNLALVRADVCRLPFASGFVDAVHAGAALHCWP 251
N+ L+ + LPF D V G L P
Sbjct: 97 ---LHNVELIHGNAMELPFPDNSFDYVTIGFGLRNVP 130
>sp|Q8CWG0|UBIE_OCEIH Demethylmenaquinone methyltransferase OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=ubiE PE=3 SV=1
Length = 238
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 167 GGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSN-LALV 224
G +DV CG+G +S +++ G V+ LDFS+NML KQ L N L LV
Sbjct: 50 GETALDVCCGTGDWSISLSEAVGQTGKVIGLDFSKNML----SIAKQKKQDLQLNQLELV 105
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWP 251
+ LP+ D V G L P
Sbjct: 106 HGNAMELPYEENSFDYVTIGFGLRNVP 132
>sp|P49016|UBIE_LACLA Demethylmenaquinone methyltransferase OS=Lactococcus lactis subsp.
lactis (strain IL1403) GN=ubiE PE=3 SV=1
Length = 252
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 170 LVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVRADV 228
++D+ CG+G ++ ++S SG V+ LDFSENML + N+ ++ +
Sbjct: 57 ILDLCCGTGDWTFDLSESVGPSGKVIGLDFSENMLEIA---KAKLKEEAKKNIEFLQGNA 113
Query: 229 CRLPFASGFVDAVHAGAALHCWP 251
LPF G D V G L P
Sbjct: 114 MALPFEKGSFDVVTIGYGLRNTP 136
>sp|B2IUM7|UBIE_NOSP7 Demethylmenaquinone methyltransferase OS=Nostoc punctiforme (strain
ATCC 29133 / PCC 73102) GN=ubiE PE=3 SV=1
Length = 230
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 156 KMAQEYFKSAQGGLLVDVSCGSGLFSRKFAKSGTYSGVV-ALDFSENMLRQCYDFIKQDN 214
+MA ++ + G +D+ CGSG + + A+ +G V +DFS N+L + +
Sbjct: 33 EMAVKWSAAKSGNTALDLCCGSGDLALRLARRVGATGYVYGVDFSCNLLETAKE--RSQK 90
Query: 215 TILTSNLALVRADVCRLPFASGFVDAVHAGAAL 247
+A V ADV LPF DA G L
Sbjct: 91 QYPQPAIAWVEADVLNLPFDDNQFDAATMGYGL 123
>sp|Q89AK7|BIOC_BUCBP Malonyl-CoA O-methyltransferase BioC OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=bioC PE=3 SV=1
Length = 247
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 170 LVDVSCGSGLFSRKFAKSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVC 229
++D CG+G FS+K+ + G + V ALDFS+NML + NT S + AD+
Sbjct: 44 ILDAGCGTGWFSKKWRQLG--NTVTALDFSKNML------LTAKNT--NSADYYLHADME 93
Query: 230 RLPFASGFVDAVHAGAALHCWPSPSNAA 257
+LP D + +L W + N A
Sbjct: 94 QLPICDNIFDLSWSNLSLQ-WCNKFNKA 120
>sp|A4XPM7|UBIE_PSEMY Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Pseudomonas mendocina (strain ymp) GN=ubiE PE=3 SV=1
Length = 256
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 167 GGLLVDVSCGSGLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225
G ++D++ G+G +RKFA G VV D +++ML+ D + + N+ V+
Sbjct: 69 GNRVLDIAGGTGDLTRKFASIVGPTGEVVLADINDSMLKVGRDRLLDKG--VAGNVQFVQ 126
Query: 226 ADVCRLPFASGFVDAV 241
AD +LPF D V
Sbjct: 127 ADAEKLPFPDNHFDVV 142
>sp|Q7W0H1|UBIE_BORPE Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589
/ NCTC 13251) GN=ubiE PE=3 SV=1
Length = 258
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVR 225
G ++D++ G+G +R FAK SG V L D +E+MLR D LT + LV
Sbjct: 73 GMKVLDIAGGTGDLARAFAKRAGPSGEVWLTDINESMLRVGRDR-------LTDSGLLVP 125
Query: 226 ADVC---RLPFASGFVDAV 241
VC RLPF S + D V
Sbjct: 126 TAVCDAERLPFPSQYFDRV 144
>sp|Q7W3N6|UBIE_BORPA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587
/ NCTC 13253) GN=ubiE PE=3 SV=1
Length = 258
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVR 225
G ++D++ G+G +R FAK SG V L D +E+MLR D LT + LV
Sbjct: 73 GMKVLDIAGGTGDLARAFAKRAGPSGEVWLTDINESMLRVGRDR-------LTDSGLLVP 125
Query: 226 ADVC---RLPFASGFVDAV 241
VC RLPF S + D V
Sbjct: 126 TAVCDAERLPFPSQYFDRV 144
>sp|Q7WF12|UBIE_BORBR Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC
13252 / RB50) GN=ubiE PE=3 SV=1
Length = 258
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 167 GGLLVDVSCGSGLFSRKFAKSGTYSGVVAL-DFSENMLRQCYDFIKQDNTILTSNLALVR 225
G ++D++ G+G +R FAK SG V L D +E+MLR D LT + LV
Sbjct: 73 GMKVLDIAGGTGDLARAFAKRAGPSGEVWLTDINESMLRVGRDR-------LTDSGLLVP 125
Query: 226 ADVC---RLPFASGFVDAV 241
VC RLPF S + D V
Sbjct: 126 TAVCDAERLPFPSQYFDRV 144
>sp|O14321|ERG6_SCHPO Sterol 24-C-methyltransferase erg6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=erg6 PE=2 SV=1
Length = 378
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 134 LYERGWRQNFNRSGFPGPDEEFKMA---QEYFKSAQGGL-----LVDVSCGSGLFSRKFA 185
LYE GW Q+F+ S F E F + E++ + + G+ ++DV CG G +R+
Sbjct: 85 LYEYGWSQSFHFSRFY-KGEAFAQSIARHEHYLAYRMGIKPGSRVLDVGCGVGGPAREIT 143
Query: 186 KSGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALVRADVCRLPFASGFVDAVHAGA 245
+ T +V L+ ++ + +C ++ + N L V+ D +PF D V+A
Sbjct: 144 EF-TGCNLVGLNNNDYQISRCNNYAVKRN--LDKKQVFVKGDFMHMPFEDNTFDYVYAIE 200
Query: 246 ALHCWPS 252
A PS
Sbjct: 201 ATVHAPS 207
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus
norvegicus GN=Pcmt1 PE=1 SV=2
Length = 227
Score = 39.7 bits (91), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSN--LA 222
+G +DV GSG+ + FA+ +SG V+ +D + ++ +K+D+ +L S+ +
Sbjct: 78 EGAKALDVGSGSGILTACFARMVGHSGKVIGIDHIKELVDDSITNVKKDDPMLLSSGRVR 137
Query: 223 LVRADVCRLPFA-SGFVDAVHAGAA 246
LV D R+ FA DA+H GAA
Sbjct: 138 LVVGD-GRMGFAEEAPYDAIHVGAA 161
>sp|P31113|UBIE_BACSU Demethylmenaquinone methyltransferase OS=Bacillus subtilis (strain
168) GN=ubiE PE=1 SV=1
Length = 233
Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+ ++ AK+ SG + LDFSENML +K S + L+
Sbjct: 47 EGAKALDVCCGTADWTIALAKAAGKSGEIKGLDFSENMLSVGEQKVKDGG---FSQIELL 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
+ LPF D V G L P
Sbjct: 104 HGNAMELPFDDDTFDYVTIGFGLRNVPD 131
>sp|A4VGE5|UBIE_PSEU5 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Pseudomonas stutzeri (strain A1501) GN=ubiE PE=3 SV=1
Length = 256
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 166 QGGLLVDVSCGSGLFSRKFAK-SGTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
G ++D++ G+G +R+F++ G VV D + +ML+ D K + + N+ V
Sbjct: 68 HGNRILDIAGGTGDLTRQFSRIVGPTGEVVLADINASMLKVGRD--KLLDKGVAGNVRFV 125
Query: 225 RADVCRLPFASGFVDAV 241
+AD +LPF + D V
Sbjct: 126 QADAEKLPFPDNYFDVV 142
>sp|O86169|UBIE_GEOSE Demethylmenaquinone methyltransferase OS=Geobacillus
stearothermophilus GN=ubiE PE=3 SV=1
Length = 234
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 166 QGGLLVDVSCGSGLFSRKFAKS-GTYSGVVALDFSENMLRQCYDFIKQDNTILTSNLALV 224
+G +DV CG+ ++ A++ G V LDFSENML+ +K N+ L+
Sbjct: 47 KGKKALDVCCGTADWTIALAEAVGPEGKVYGLDFSENMLKVGEQKVKARG---LHNVKLI 103
Query: 225 RADVCRLPFASGFVDAVHAGAALHCWPS 252
+ +LPF D V G L P
Sbjct: 104 HGNAMQLPFPDNSFDYVTIGFGLRNVPD 131
>sp|Q2T139|UBIE_BURTA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia thailandensis (strain E264 / ATCC 700388
/ DSM 13276 / CIP 106301) GN=ubiE PE=3 SV=1
Length = 243
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 167 GGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225
GG ++D++ G+G ++ FAK+ +G V D +E+MLR D + D ++T +L
Sbjct: 59 GGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRL-LDKGVVTPSLL--- 114
Query: 226 ADVCRLPFASGFVDAV 241
D +LPF + D V
Sbjct: 115 CDAEKLPFPDNYFDVV 130
>sp|Q63XA0|UBIE_BURPS Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain K96243) GN=ubiE
PE=3 SV=1
Length = 243
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 167 GGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225
GG ++D++ G+G ++ FAK+ +G V D +E+MLR D + D ++T +L
Sbjct: 59 GGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRL-LDKGVVTPSLL--- 114
Query: 226 ADVCRLPFASGFVDAV 241
D +LPF + D V
Sbjct: 115 CDAEKLPFPDNYFDVV 130
>sp|A3N5U8|UBIE_BURP6 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain 668) GN=ubiE PE=3
SV=1
Length = 243
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 167 GGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225
GG ++D++ G+G ++ FAK+ +G V D +E+MLR D + D ++T +L
Sbjct: 59 GGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRL-LDKGVVTPSLL--- 114
Query: 226 ADVCRLPFASGFVDAV 241
D +LPF + D V
Sbjct: 115 CDAEKLPFPDNYFDVV 130
>sp|Q3JVZ6|UBIE_BURP1 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain 1710b) GN=ubiE PE=3
SV=1
Length = 243
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 167 GGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225
GG ++D++ G+G ++ FAK+ +G V D +E+MLR D + D ++T +L
Sbjct: 59 GGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRL-LDKGVVTPSLL--- 114
Query: 226 ADVCRLPFASGFVDAV 241
D +LPF + D V
Sbjct: 115 CDAEKLPFPDNYFDVV 130
>sp|A3NRJ4|UBIE_BURP0 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia pseudomallei (strain 1106a) GN=ubiE PE=3
SV=1
Length = 243
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 167 GGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225
GG ++D++ G+G ++ FAK+ +G V D +E+MLR D + D ++T +L
Sbjct: 59 GGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRL-LDKGVVTPSLL--- 114
Query: 226 ADVCRLPFASGFVDAV 241
D +LPF + D V
Sbjct: 115 CDAEKLPFPDNYFDVV 130
>sp|A1V753|UBIE_BURMS Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia mallei (strain SAVP1) GN=ubiE PE=3 SV=1
Length = 243
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 167 GGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225
GG ++D++ G+G ++ FAK+ +G V D +E+MLR D + D ++T +L
Sbjct: 59 GGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRL-LDKGVVTPSLL--- 114
Query: 226 ADVCRLPFASGFVDAV 241
D +LPF + D V
Sbjct: 115 CDAEKLPFPDNYFDVV 130
>sp|Q62MP4|UBIE_BURMA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia mallei (strain ATCC 23344) GN=ubiE PE=3
SV=1
Length = 243
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 167 GGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225
GG ++D++ G+G ++ FAK+ +G V D +E+MLR D + D ++T +L
Sbjct: 59 GGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRL-LDKGVVTPSLL--- 114
Query: 226 ADVCRLPFASGFVDAV 241
D +LPF + D V
Sbjct: 115 CDAEKLPFPDNYFDVV 130
>sp|A2S8L1|UBIE_BURM9 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Burkholderia mallei (strain NCTC 10229) GN=ubiE PE=3
SV=1
Length = 243
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 167 GGLLVDVSCGSGLFSRKFAKSGTYSG-VVALDFSENMLRQCYDFIKQDNTILTSNLALVR 225
GG ++D++ G+G ++ FAK+ +G V D +E+MLR D + D ++T +L
Sbjct: 59 GGKVLDIAAGTGDLTKAFAKAAGPTGEVWHTDINESMLRVGRDRL-LDKGVVTPSLL--- 114
Query: 226 ADVCRLPFASGFVDAV 241
D +LPF + D V
Sbjct: 115 CDAEKLPFPDNYFDVV 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,092,736
Number of Sequences: 539616
Number of extensions: 4713808
Number of successful extensions: 12108
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 181
Number of HSP's that attempted gapping in prelim test: 12074
Number of HSP's gapped (non-prelim): 191
length of query: 319
length of database: 191,569,459
effective HSP length: 117
effective length of query: 202
effective length of database: 128,434,387
effective search space: 25943746174
effective search space used: 25943746174
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)