Query 020993
Match_columns 319
No_of_seqs 274 out of 2056
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 11:10:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020993.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020993hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ct9_A Asparagine synthetase B 100.0 1.1E-66 3.9E-71 506.9 28.3 317 1-317 116-439 (553)
2 1q15_A CARA; CMPR, (2S,5S)-5-c 100.0 2.5E-62 8.4E-67 471.8 22.7 299 1-316 99-430 (503)
3 1jgt_A Beta-lactam synthetase; 100.0 6.7E-62 2.3E-66 469.5 25.4 294 1-317 116-433 (513)
4 1ao0_A Glutamine phosphoribosy 99.6 2.4E-14 8.1E-19 136.3 13.0 105 1-108 153-271 (459)
5 2e18_A NH(3)-dependent NAD(+) 99.3 1.5E-12 5.3E-17 114.6 6.8 135 92-239 6-141 (257)
6 1kqp_A NAD+ synthase, NH(3)-de 99.3 7.2E-12 2.5E-16 111.0 9.9 144 90-240 20-170 (271)
7 1xff_A D-fructose-6-, glucosam 99.3 5.6E-12 1.9E-16 109.8 9.0 71 1-75 151-222 (240)
8 1xng_A NH(3)-dependent NAD(+) 99.3 4.2E-12 1.4E-16 112.4 7.6 133 92-239 9-144 (268)
9 3bl5_A Queuosine biosynthesis 99.3 1.6E-11 5.6E-16 105.1 10.1 157 110-295 3-173 (219)
10 3n05_A NH(3)-dependent NAD(+) 99.2 2.4E-11 8.1E-16 119.1 8.9 138 91-240 305-446 (590)
11 2pg3_A Queuosine biosynthesis 99.2 4.7E-10 1.6E-14 97.0 15.8 158 111-296 3-177 (232)
12 3k32_A Uncharacterized protein 99.2 1E-10 3.5E-15 99.2 9.4 109 111-234 7-115 (203)
13 1wxi_A NH(3)-dependent NAD(+) 99.1 1.8E-10 6.2E-15 102.0 10.1 137 100-239 27-172 (275)
14 3p52_A NH(3)-dependent NAD(+) 99.1 4.8E-11 1.7E-15 104.2 6.3 132 93-239 7-145 (249)
15 3fiu_A NH(3)-dependent NAD(+) 99.1 5.8E-11 2E-15 103.8 6.8 134 91-239 12-154 (249)
16 1ecf_A Glutamine phosphoribosy 99.1 1E-10 3.5E-15 112.4 8.0 68 1-69 162-234 (504)
17 2bpl_A Glucosamine--fructose-6 99.0 9E-10 3.1E-14 108.3 8.8 67 1-71 151-218 (608)
18 2dpl_A GMP synthetase, GMP syn 98.9 1.7E-09 5.9E-14 97.4 7.9 125 94-233 5-133 (308)
19 2hma_A Probable tRNA (5-methyl 98.9 2E-09 6.9E-14 99.5 7.9 113 110-234 9-137 (376)
20 1wy5_A TILS, hypothetical UPF0 98.9 4.1E-09 1.4E-13 95.4 9.7 125 93-232 5-137 (317)
21 2nz2_A Argininosuccinate synth 98.9 7.4E-09 2.5E-13 96.6 10.4 110 110-230 5-121 (413)
22 3q4g_A NH(3)-dependent NAD(+) 98.9 2.8E-09 9.6E-14 94.2 7.2 143 92-239 24-181 (279)
23 1vl2_A Argininosuccinate synth 98.9 6E-09 2E-13 96.7 9.2 108 111-230 15-130 (421)
24 1kor_A Argininosuccinate synth 98.8 1.3E-08 4.6E-13 94.6 11.2 110 112-231 2-118 (400)
25 2der_A TRNA-specific 2-thiouri 98.8 1.2E-08 4E-13 94.4 8.6 112 110-233 17-145 (380)
26 3mdn_A Glutamine aminotransfer 98.7 1.1E-08 3.6E-13 90.6 6.6 65 6-74 187-254 (274)
27 3dpi_A NAD+ synthetase; ssgcid 98.7 1.4E-08 4.7E-13 89.9 6.3 133 101-239 35-181 (285)
28 1k92_A Argininosuccinate synth 98.6 7.3E-08 2.5E-12 90.4 8.2 112 107-229 7-130 (455)
29 3a2k_A TRNA(Ile)-lysidine synt 98.6 1.3E-07 4.3E-12 90.0 9.3 119 99-232 5-131 (464)
30 3tqi_A GMP synthase [glutamine 98.6 1.2E-07 4.2E-12 91.4 8.9 126 94-234 215-344 (527)
31 1gpm_A GMP synthetase, XMP ami 98.6 1.2E-07 4.2E-12 91.4 8.4 124 93-231 211-339 (525)
32 3sdb_A Glutamine-dependent NAD 98.6 8.9E-08 3.1E-12 95.0 7.4 84 92-181 341-431 (680)
33 2ywb_A GMP synthase [glutamine 98.5 2.5E-07 8.7E-12 88.8 9.4 123 94-232 194-320 (503)
34 4f4h_A Glutamine dependent NAD 98.5 7.7E-07 2.6E-11 86.5 12.6 139 91-240 279-426 (565)
35 1sur_A PAPS reductase; assimil 98.5 4.6E-07 1.6E-11 77.1 9.8 110 111-232 45-159 (215)
36 3ilv_A Glutamine-dependent NAD 98.5 3.2E-07 1.1E-11 90.5 9.7 145 92-239 283-471 (634)
37 2vxo_A GMP synthase [glutamine 98.4 2.5E-06 8.6E-11 84.6 13.9 81 92-181 223-305 (697)
38 2c5s_A THII, probable thiamine 98.4 3.2E-07 1.1E-11 85.9 7.1 106 112-233 189-303 (413)
39 1ni5_A Putative cell cycle pro 98.3 2.3E-06 7.7E-11 80.6 10.3 111 103-232 6-120 (433)
40 3uow_A GMP synthetase; structu 98.3 1.1E-06 3.8E-11 85.1 7.9 126 93-233 239-373 (556)
41 1zun_A Sulfate adenylyltransfe 98.2 7.6E-06 2.6E-10 74.0 10.4 112 110-234 46-160 (325)
42 2o8v_A Phosphoadenosine phosph 98.2 4E-06 1.4E-10 73.2 8.2 109 111-233 46-161 (252)
43 2oq2_A Phosphoadenosine phosph 98.0 1.5E-05 5.3E-10 69.8 8.4 112 111-233 42-164 (261)
44 1vbk_A Hypothetical protein PH 97.8 3.1E-05 1.1E-09 69.4 7.2 79 112-232 181-267 (307)
45 3rjz_A N-type ATP pyrophosphat 97.8 2E-05 6.8E-10 67.7 5.7 60 112-181 6-73 (237)
46 1ea0_A Glutamate synthase [NAD 97.7 5.9E-05 2E-09 79.2 7.0 66 1-68 326-394 (1479)
47 1ofd_A Ferredoxin-dependent gl 97.6 9.9E-05 3.4E-09 77.7 7.9 66 1-68 325-393 (1520)
48 2goy_A Adenosine phosphosulfat 97.5 0.0005 1.7E-08 60.5 9.8 60 111-181 55-116 (275)
49 1te5_A Conserved hypothetical 97.3 0.00025 8.7E-09 61.8 5.0 65 4-73 168-252 (257)
50 2wsi_A FAD synthetase; transfe 97.0 0.00068 2.3E-08 60.6 5.5 69 111-179 54-136 (306)
51 3fwk_A FMN adenylyltransferase 96.0 0.011 3.9E-07 52.3 6.5 67 112-178 60-140 (308)
52 2xn6_B Thyroxine-binding globu 34.9 50 0.0017 18.5 3.4 20 2-21 7-27 (35)
53 1hle_B Horse leukocyte elastas 34.0 52 0.0018 17.8 3.3 20 2-21 6-26 (31)
54 2riv_B Thyroxine-binding globu 33.8 50 0.0017 19.1 3.4 21 2-22 12-33 (40)
55 4afx_B Protein Z dependent pro 32.8 47 0.0016 18.7 3.1 20 2-21 8-28 (36)
56 2h4p_B MENT, heterochromatin-a 31.3 59 0.002 18.0 3.3 15 3-17 8-22 (34)
57 1vyi_A RNA polymerase alpha su 29.8 20 0.00067 25.4 1.3 30 285-314 49-78 (112)
58 3ri6_A O-acetylhomoserine sulf 29.5 1.4E+02 0.0049 27.0 7.6 118 95-229 83-206 (430)
59 3ndd_B Alpha-1-antitrypsin; se 28.8 49 0.0017 18.7 2.7 21 2-22 8-29 (36)
60 3f9t_A TDC, L-tyrosine decarbo 26.5 3E+02 0.01 23.5 11.1 130 93-229 68-210 (397)
61 3mmt_A Fructose-bisphosphate a 26.3 1.1E+02 0.0037 27.1 5.6 32 91-122 241-272 (347)
62 3ndn_A O-succinylhomoserine su 25.8 3E+02 0.01 24.5 9.0 117 95-228 82-204 (414)
63 3nwp_A 6-phosphogluconolactona 24.5 39 0.0013 28.2 2.5 41 92-132 18-58 (233)
64 3lhi_A Putative 6-phosphogluco 24.5 39 0.0013 28.1 2.5 40 92-131 15-54 (232)
65 4b4k_A N5-carboxyaminoimidazol 23.6 1.1E+02 0.0038 24.4 4.8 59 158-237 33-94 (181)
66 3s4o_A Protein tyrosine phosph 23.1 1.8E+02 0.0062 21.7 6.1 39 92-130 87-129 (167)
67 1vl1_A 6PGL, 6-phosphogluconol 23.0 71 0.0024 26.5 3.8 42 89-130 23-64 (232)
68 1m93_C Serine proteinase inhib 22.7 98 0.0033 18.0 3.3 20 3-22 15-34 (41)
69 3trh_A Phosphoribosylaminoimid 22.4 1.4E+02 0.0049 23.5 5.2 59 158-237 17-78 (169)
70 3lwd_A 6-phosphogluconolactona 22.1 68 0.0023 26.5 3.5 40 93-132 15-54 (226)
71 3mbd_A Fructose-bisphosphate a 22.0 1.9E+02 0.0067 25.4 6.4 42 91-132 240-284 (342)
72 3eb9_A 6-phosphogluconolactona 21.7 52 0.0018 28.0 2.7 42 90-131 15-56 (266)
73 4grd_A N5-CAIR mutase, phospho 21.5 1.2E+02 0.0043 23.9 4.6 58 158-236 23-83 (173)
74 3lp6_A Phosphoribosylaminoimid 20.7 1.3E+02 0.0046 23.8 4.7 58 158-236 18-78 (174)
75 3ico_A 6PGL, 6-phosphogluconol 20.4 52 0.0018 28.1 2.5 41 92-132 36-76 (268)
76 1as4_B Antichymotrypsin, ACT; 20.4 62 0.0021 18.4 2.0 19 3-21 10-29 (37)
77 3oc6_A 6-phosphogluconolactona 20.3 53 0.0018 27.6 2.5 41 92-132 20-60 (248)
78 3ors_A N5-carboxyaminoimidazol 20.2 1.3E+02 0.0043 23.7 4.4 59 158-237 14-75 (163)
79 3kx6_A Fructose-bisphosphate a 20.0 2E+02 0.0067 25.8 6.0 42 91-132 264-308 (379)
No 1
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=100.00 E-value=1.1e-66 Score=506.90 Aligned_cols=317 Identities=56% Similarity=0.948 Sum_probs=275.0
Q ss_pred CcceeEEEEEEECCCCEEEEEecCCCCcceEEEEecCCeEEEeecchhhhhccccceeeCCCcEEEecCCeEEEeeCCCC
Q 020993 1 MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPC 80 (319)
Q Consensus 1 ~l~G~fa~~i~D~~~~~l~l~rD~~G~kpLyy~~~~~~~~~fsSe~~~l~~~~~~i~~l~pG~~l~~~~~~~~~~~~~~~ 80 (319)
+|+|||||++||.++++++++||++|+|||||....++.++||||+++|...+++|+.|||||++.++++++++||++.|
T Consensus 116 ~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy~~~~~~~~~~faSe~~al~~~~~~i~~l~pG~~~~~~~g~~~~yw~~~~ 195 (553)
T 1ct9_A 116 DLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDW 195 (553)
T ss_dssp GCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEECTTCCEEEESSGGGTTTTCSEEEECCTTEEEETTTCSEEECCCCGG
T ss_pred hCCccEEEEEEECCCCEEEEEECCCCCCCeEEEEecCCEEEEeechHHHHhhcCCEEEECCCeEEEEcCCcEEEeecCCc
Confidence 58999999999998999999999999999999984357899999999999999999999999999987777899999876
Q ss_pred CCC-CCCCCCccHHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhh----hhhcCCCcceeeccCC
Q 020993 81 YSE-QIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEA----ACQWGSQLHSFCIGLE 155 (319)
Q Consensus 81 ~~~-~~~~~~~~~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~----~~~~~~~~~~~t~~~~ 155 (319)
... ..++.++.+++++++|.+||++|+.+++|+|++||||+|||+|++++++...+... ...+..++++||++++
T Consensus 196 ~~~~~~~~~~~~~~~lr~~L~~aV~~rl~sdvpvgv~LSGGlDSS~iaala~~~~~~~~~~~~~~~a~~~~l~tfsig~~ 275 (553)
T 1ct9_A 196 FDYDAVKDNVTDKNELRQALEDSVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP 275 (553)
T ss_dssp GSHHHHTTCCCCHHHHHHHHHHHHHHHTCCSSCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEEST
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHHHhcCCCceEEeCCCCccHHHHHHHHHHhhccccccccccccccCceeEEEecCC
Confidence 431 22355778999999999999999999999999999999999999999987643100 0000013899999999
Q ss_pred CCccHHHHHHHHHHhCCcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHHHHHHHHHHHhcCCeEEEeccCcccccc
Q 020993 156 GSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFG 235 (319)
Q Consensus 156 ~~~e~~~A~~va~~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf~ 235 (319)
+++|..+|+++|+++|++|+++.++.+++.+.+++++++.++|+++++++.+++|++++.+++.|++|++||+||||+||
T Consensus 276 ~~~E~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~g~~vvLsG~GaDElfg 355 (553)
T 1ct9_A 276 GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGSDEVFG 355 (553)
T ss_dssp TCHHHHHHHHHHHHHTCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTCCEEECCTTHHHHHT
T ss_pred CCcHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHcCCeEEEECCCchhccc
Confidence 88999999999999999999999999999999999999988876544555678899999999999999999999999999
Q ss_pred CccccccCCChhHHHHHHHHHHHHhhhhhccccchhhhccCceeccccCCHHHHHHHhcCCccccccCC--CcchhHHHh
Q 020993 236 GYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKEFINTAMSIDPEWKMVWE--FSYIVLHFI 313 (319)
Q Consensus 236 Gy~~~~~~~~~~~~~~~~~~~~~~l~~~~l~r~dr~~~~~gve~r~Pfld~~lve~~~~lp~~~k~~~~--~~~~~~r~~ 313 (319)
||.+|+..+....+.+++.+++.+++.++++|.||++|++|+|+|+||||++||||+++||+++|+.++ .+|.+||.+
T Consensus 356 GY~~~~~~~~~~~~~~e~~~~l~~l~~~~l~r~Dr~~ma~glE~R~PfLD~~lve~a~~lP~~~k~~~~g~~~K~iLR~a 435 (553)
T 1ct9_A 356 GYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILREC 435 (553)
T ss_dssp CSGGGGGCCSHHHHHHHHHHHHHHGGGTHHHHHHHHHHTTTCEEECGGGCHHHHHHHHHSCGGGTCC---CCTTHHHHHH
T ss_pred CcHhHhhCcchhhHHHHHHHHHHHHhhhcchhhhhHHhhcCceeECCcCCHHHHHHHhcCCHHHhccCCCCcchHHHHHH
Confidence 999998888877788888888999999999999999999999999999999999999999999999973 678888888
Q ss_pred hhcc
Q 020993 314 LWPL 317 (319)
Q Consensus 314 ~~~~ 317 (319)
++++
T Consensus 436 ~~~~ 439 (553)
T 1ct9_A 436 FEAY 439 (553)
T ss_dssp HGGG
T ss_pred HHhh
Confidence 7763
No 2
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=100.00 E-value=2.5e-62 Score=471.77 Aligned_cols=299 Identities=23% Similarity=0.348 Sum_probs=257.1
Q ss_pred CcceeEEEEEEECCCCEEEEEecCCCCcceEEEEecCCe-----------------EEEeecchhhhhc--------ccc
Q 020993 1 MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGS-----------------IWFASEMKALSDD--------CER 55 (319)
Q Consensus 1 ~l~G~fa~~i~D~~~~~l~l~rD~~G~kpLyy~~~~~~~-----------------~~fsSe~~~l~~~--------~~~ 55 (319)
+|+|+|||++||..++ ++++|||+|+|||||+.. ++. ++||||+++|... +++
T Consensus 99 ~l~G~fa~~i~d~~~~-l~~aRD~~G~rPL~y~~~-~~~~~t~~l~l~~~~~~~~~~~faSE~~al~~~~~~~~~T~~~~ 176 (503)
T 1q15_A 99 LAEGDFCFFIDEPNGE-LTVITESRGFSPVHVVQG-KKAWMTNSLKLVTAAEGEGALWFEEEALVCQSLMRADTYTPVKN 176 (503)
T ss_dssp GCCSSEEEEEECTTSC-EEEEECSSSSSCCEEEES-SSEEEESCHHHHHHHHCTTSSCBCCHHHHTTCSCCCTTCCSBTT
T ss_pred HcCEEEEEEEEeCCCC-EEEEECCCCCeeEEEEEe-CCceecccccccccccCCcceEEecchHHHHhccCCCCCcccCC
Confidence 5899999999999888 999999999999999985 667 9999999999887 899
Q ss_pred ceeeCCCcEEEecCC------eEEEeeCCCCCCC-CCCCCCccHHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHH
Q 020993 56 FISFPPGHIYSSKQG------GLRRWYNPPCYSE-QIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAA 128 (319)
Q Consensus 56 i~~l~pG~~l~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa 128 (319)
|++||||+++.++.+ ..++||++..... ...+.++.+++++++|.+||++|+.+++|++++||||+|||+|++
T Consensus 177 v~~l~pG~~~~i~~~g~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~l~~~L~~aV~~rl~sd~~v~v~LSGGlDSs~vaa 256 (503)
T 1q15_A 177 AQRLKPGAVHVLTHDSEGYSFVESRTLTTPASNQLLALPREPLLALIDRYLNAPLEDLAPRFDTVGIPLSGGLDSSLVTA 256 (503)
T ss_dssp EEECCSSEEEEEEECTTCCEEEEEEESCCCCCCSCBCCCHHHHHHHHHHHHHHHHHHHGGGCSEEEEECCSSHHHHHHHH
T ss_pred eEEECCCeEEEEeCCCcccccceeeecCCcccccccCCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEECCCCHHHHHHHH
Confidence 999999999987532 2678999865421 122345668899999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhcCCCcceeeccCCCCccHHHHHHHHHHhCCcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHH
Q 020993 129 VASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTP 208 (319)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~e~~~A~~va~~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 208 (319)
++++.. .++.+||+++++.+|..+|+++|+++|++|+++.++++++.+.+++.+++++.|++....+.++
T Consensus 257 la~~~~----------~~~~~~t~~~~~~~E~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~~ 326 (503)
T 1q15_A 257 LASRHF----------KKLNTYSIGTELSNEFEFSQQVADALGTHHQMKILSETEVINGIIESIYYNEIFDGLSAEIQSG 326 (503)
T ss_dssp HHTTTC----------SEEEEEEEEETTBCCHHHHHHHHHHHTCEEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred HHHHhC----------CCcEEEEEeCCCccHHHHHHHHHHHhCCceEEEECCHHHHHHHHHHHHHHhcCCCcccchhHHH
Confidence 998754 3689999999888999999999999999999999999989899999999888765433334567
Q ss_pred HHHHHHHHHhcCCeEEEeccCccccccCcccc-ccCCChhHHHHHHHHHHHHhhhhhccccchhhhccCceeccccCCHH
Q 020993 209 MFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF-HKAPNKEEFHQETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKE 287 (319)
Q Consensus 209 ~~~l~~~a~~~g~~v~ltG~G~Delf~Gy~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~r~dr~~~~~gve~r~Pfld~~ 287 (319)
+|++++.| +.|++|++||+||||+|+||.+| .+.+....+..+..+++. +++.|.||++|++|+|+|+||||++
T Consensus 327 ~~~l~~~a-~~~~~VvltG~GaDElf~GY~~~~~~~~~~~~l~~e~~~r~~----~~L~r~Dr~~ma~glE~R~PfLD~~ 401 (503)
T 1q15_A 327 LFNVYRQA-QGQVSCMLTGYGSDLLFGGILKPGAQYDNPNQLLAEQVYRTR----WTGEFATHGASCYGIDIRHPFWSHS 401 (503)
T ss_dssp HHHHHHHH-BTTBSEEECCTTHHHHHTTTSCTTCCCSCHHHHHHHHHHHHH----HHSTTCCHHHHHTTCEEECTTCCHH
T ss_pred HHHHHHHH-HCCCCEEEeCCChhhhccChHHHHHhcCCHHHHhHHHHHHHH----HhhhhhhHHHHHcCCCEECCCCCHH
Confidence 88888887 57899999999999999999988 455554455555544433 6788999999999999999999999
Q ss_pred HHHHHhcCCccccccCCCcchhHHHhhhc
Q 020993 288 FINTAMSIDPEWKMVWEFSYIVLHFILWP 316 (319)
Q Consensus 288 lve~~~~lp~~~k~~~~~~~~~~r~~~~~ 316 (319)
|||||++||+++|+.++..|.+||.+++.
T Consensus 402 lve~a~~lP~~~k~~~~~~K~iLR~a~~~ 430 (503)
T 1q15_A 402 LISLCHALHPDYKIFDNEVKNILREYADS 430 (503)
T ss_dssp HHHHHHTBCGGGTEETTEESHHHHHHHHH
T ss_pred HHHHHHhCCHHHHhCCCCcHHHHHHHHhc
Confidence 99999999999999999888899988876
No 3
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=100.00 E-value=6.7e-62 Score=469.46 Aligned_cols=294 Identities=26% Similarity=0.338 Sum_probs=253.0
Q ss_pred CcceeEEEEEEECCCCEEEEEecCCCCcceEEEEecCCeEEEeecchhhhhcc----------------ccceeeCCCcE
Q 020993 1 MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDC----------------ERFISFPPGHI 64 (319)
Q Consensus 1 ~l~G~fa~~i~D~~~~~l~l~rD~~G~kpLyy~~~~~~~~~fsSe~~~l~~~~----------------~~i~~l~pG~~ 64 (319)
+|+|||||++||.++ ++++|||+|+|||||+.. ++.++||||+++|+... ++|++|||||+
T Consensus 116 ~l~G~fA~~i~d~~~--l~~aRD~~G~kPLyy~~~-~~~~~faSe~~aL~~~~~~~~~~l~~~~~~t~~~~i~~l~pG~~ 192 (513)
T 1jgt_A 116 LVNGRFATVVRTGDR--VLLATDHAGSVPLYTCVA-PGEVRASTEAKALAAHRDPKGFPLADARRVAGLTGVYQVPAGAV 192 (513)
T ss_dssp TCCEEEEEEEEETTE--EEEEECTTCCSCCEEEEE-TTEEEEESCHHHHHTC--CCCCCCTTSEECSSCSSCEECCTTEE
T ss_pred hcCeeEEEEEEECCE--EEEEECCCCCceeEEEEe-CCEEEEcchHHHHHhccCcccccccCCCccccccceEEcCCCcE
Confidence 589999999999854 999999999999999985 78899999999998764 89999999999
Q ss_pred EEec--CCe--EEEeeCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhh
Q 020993 65 YSSK--QGG--LRRWYNPPCYSEQIPSNPYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAA 140 (319)
Q Consensus 65 l~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~ 140 (319)
+.++ +++ .++||++.... ...+.++.+++++++|.++|++|+.+++|+|++||||+|||+|++++++..
T Consensus 193 l~i~~~~g~~~~~~yw~~~~~~-~~~~~~~~~~~l~~~L~~aV~~rl~sd~~vgv~LSGGlDSS~vaala~~~~------ 265 (513)
T 1jgt_A 193 MDIDLGSGTAVTHRTWTPGLSR-RILPEGEAVAAVRAALEKAVAQRVTPGDTPLVVLSGGIDSSGVAACAHRAA------ 265 (513)
T ss_dssp EEEETTTTEEEEEECCCCCCSC-BCCCHHHHHHHHHHHHHHHHHHHSCTTCCCEEECCSSHHHHHHHHHHHHHH------
T ss_pred EEEEcCCCCEEEEeecCCcccc-cCCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEECCCcHHHHHHHHHHHHhC------
Confidence 9886 554 57899986542 223445678899999999999999999999999999999999999998875
Q ss_pred hhcCCCcceeeccCCCCccHHHHHHHHHHhCCcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHHHHHHHHHHHhcC
Q 020993 141 CQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLG 220 (319)
Q Consensus 141 ~~~~~~~~~~t~~~~~~~e~~~A~~va~~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~g 220 (319)
.+++|||+++++.+|..+|+++|+++|++|+++.++.+++.+.+++.++++++|++....+.+++|++++.+ +.|
T Consensus 266 ----~~v~tfti~~~~~~E~~~A~~vA~~lg~~h~~i~i~~~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~l~~~a-~~g 340 (513)
T 1jgt_A 266 ----GELDTVSMGTDTSNEFREARAVVDHLRTRHREITIPTTELLAQLPYAVWASESVDPDIIEYLLPLTALYRAL-DGP 340 (513)
T ss_dssp ----SSCEEEEEECSSCCCHHHHHHHHHHHTCEEEEEECCHHHHHTTHHHHHHHHCCCCHHHHHHHHHHHHHHHHC-CSS
T ss_pred ----CCceEEEcCCCCCCHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHHHhCCCCcccchhHHHHHHHHHHH-HcC
Confidence 368999999998899999999999999999999999988888999999988876543333456778888877 579
Q ss_pred CeEEEeccCccccccCccccccCCChhHHHHHHHHHHHHhhhhhccccchhhh----ccCceeccccCCHHHHHHHhcCC
Q 020993 221 VKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHLYDCLRANKSTS----AWGVEARVPFLDKEFINTAMSID 296 (319)
Q Consensus 221 ~~v~ltG~G~Delf~Gy~~~~~~~~~~~~~~~~~~~~~~l~~~~l~r~dr~~~----~~gve~r~Pfld~~lve~~~~lp 296 (319)
++|++||+||||+|+||.+|. ....+..+ .+++++.++++ ||++| ++|+|+|+||||++|||||++||
T Consensus 341 ~~VvltG~GaDElfgGY~~~~---~~~~l~~e---~l~~l~~~~ll--Dr~sm~la~a~glE~R~PfLD~~lve~a~~lP 412 (513)
T 1jgt_A 341 ERRILTGYGADIPLGGMHRED---RLPALDTV---LAHDMATFDGL--NEMSPVLSTLAGHWTTHPYWDREVLDLLVSLE 412 (513)
T ss_dssp CCEEECCTTTHHHHTTTCCCS---CCHHHHHH---HHHHHHHCTTC--CTTCTHHHHTTTCEEECGGGSHHHHHHHHHBC
T ss_pred CCEEEeCCChhhcccCccccC---ChhhcCHH---HHHHHhhccch--hhhhhhhhhhcCcceECCCCCHHHHHHHHcCC
Confidence 999999999999999999872 33344444 35566667777 99999 99999999999999999999999
Q ss_pred ccccccCCCcchhHHHhhhcc
Q 020993 297 PEWKMVWEFSYIVLHFILWPL 317 (319)
Q Consensus 297 ~~~k~~~~~~~~~~r~~~~~~ 317 (319)
+++|+.++..|.+||.+++.+
T Consensus 413 ~~~k~~~~~~K~iLR~a~~~~ 433 (513)
T 1jgt_A 413 AGLKRRHGRDKWVLRAAMADA 433 (513)
T ss_dssp HHHHEETTEETHHHHHHHTTT
T ss_pred HHHhcCCCCCHHHHHHHHHhh
Confidence 999999998888999888764
No 4
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.55 E-value=2.4e-14 Score=136.30 Aligned_cols=105 Identities=23% Similarity=0.309 Sum_probs=83.8
Q ss_pred CcceeEEEEEEECCCCEEEEEecCCCCcceEEEEecCCeEEEeecchhhhhc-cccceeeCCCcEEEecCCe--EEEeeC
Q 020993 1 MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDD-CERFISFPPGHIYSSKQGG--LRRWYN 77 (319)
Q Consensus 1 ~l~G~fa~~i~D~~~~~l~l~rD~~G~kpLyy~~~~~~~~~fsSe~~~l~~~-~~~i~~l~pG~~l~~~~~~--~~~~~~ 77 (319)
+|+|+|||++|| .++++++|||+|+|||||... ++.++||||+++|... .++|+.|+||+++.++.+. ..+||+
T Consensus 153 ~l~G~fa~~i~d--~~~l~~~RD~~G~rPL~~~~~-~~~~~~ASE~~al~~~~~~~i~~l~pG~~~~i~~~~~~~~~~~~ 229 (459)
T 1ao0_A 153 MLKGAYAFLIMT--ETEMIVALDPNGLRPLSIGMM-GDAYVVASETCAFDVVGATYLREVEPGEMLIINDEGMKSERFSM 229 (459)
T ss_dssp TCCEEEEEEEEC--SSEEEEEECTTCCSCCEEEEE-TTEEEEESSTHHHHHHTCEEEEECCTTEEEEEETTEEEEEESCS
T ss_pred hhccceEEEEEe--CCEEEEEECCCCCCCeEEEec-CCEEEEEECchHHhcCCCceEEEECCCEEEEEECCceEEEecCC
Confidence 589999999999 479999999999999999986 6789999999999875 6899999999999987653 467887
Q ss_pred CCCCCC--------CCC---CCCccHHHHHHHHHHHHHHHHh
Q 020993 78 PPCYSE--------QIP---SNPYDPLVLRKAFEKAVVKRLM 108 (319)
Q Consensus 78 ~~~~~~--------~~~---~~~~~~~~l~~~l~~av~~rl~ 108 (319)
+..... ..| ...+.+.+.+..+.+.+.+.+.
T Consensus 230 ~~~~~~c~feyiyfarp~s~~~~~~v~~~r~~lg~~La~~~~ 271 (459)
T 1ao0_A 230 NINRSICSMEYIYFSRPDSNIDGINVHSARKNLGKMLAQESA 271 (459)
T ss_dssp SCCCCEEHHHHHTTSCTTCEETTEEHHHHHHHHHHHHHHHHC
T ss_pred CccccccceeeeeccCCcchhccHhHHHHHHHHHHHHHHhcc
Confidence 532100 112 1345677888889888888764
No 5
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=99.32 E-value=1.5e-12 Score=114.57 Aligned_cols=135 Identities=19% Similarity=0.231 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCCCccHHHHHHHHHHhC
Q 020993 92 PLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLG 171 (319)
Q Consensus 92 ~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~e~~~A~~va~~lg 171 (319)
.+++.+.+.+.+++. ...+++++||||+||+++++++.+.+.. .++.++++.+....|.+.|+++|+.+|
T Consensus 6 ~~~~~~~l~~~i~~~--~~~~vvv~lSGGiDSs~~~~l~~~~~g~--------~~v~av~~~~~~~~~~~~a~~~a~~lg 75 (257)
T 2e18_A 6 YDKVIERILEFIREK--GNNGVVIGISGGVDSATVAYLATKALGK--------EKVLGLIMPYFENKDVEDAKLVAEKLG 75 (257)
T ss_dssp HHHHHHHHHHHHHHH--CTTCEEEECCSSHHHHHHHHHHHHHHCG--------GGEEEEECCSSCSTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHh--CCCcEEEEecCCHHHHHHHHHHHHhcCC--------CcEEEEEeCCCCchHHHHHHHHHHHhC
Confidence 456667777777776 4578999999999999999999887631 367888876543378899999999999
Q ss_pred CcceEEEeChhHHHHHHHHHHHhhccCC-cCccCchHHHHHHHHHHHhcCCeEEEeccCccccccCccc
Q 020993 172 TRHHEFHFTVQEGIDALEEVIYHIETYD-VTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLY 239 (319)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf~Gy~~ 239 (319)
++|+++++++ ..+.+...+.....+. ...+.....+..+.+.|.+.|+.++.||+ .||.+.||..
T Consensus 76 i~~~~i~i~~--~~~~~~~~l~~~~~~~~~~n~~ar~r~~~l~~~A~~~g~~vl~tg~-~~e~~~Gy~t 141 (257)
T 2e18_A 76 IGYKVINIKP--IVDSFVENLELNLDRKGLGNIMSRTRMIMLYAHANSLGRIVLGTSN-RSEFLTGYFT 141 (257)
T ss_dssp CEEEECCCHH--HHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCC-HHHHHHTCSC
T ss_pred CCEEEEEChH--HHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHcCCEEEEcCc-hhHHhcCCee
Confidence 9999987754 2222222211100000 00010112345566778888999999998 5677788853
No 6
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=99.30 E-value=7.2e-12 Score=110.97 Aligned_cols=144 Identities=15% Similarity=0.115 Sum_probs=89.5
Q ss_pred ccHHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcC-CCcceeeccCCCCccHHHHHHHHH
Q 020993 90 YDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWG-SQLHSFCIGLEGSPDLKAAREVAD 168 (319)
Q Consensus 90 ~~~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~-~~~~~~t~~~~~~~e~~~A~~va~ 168 (319)
+.++++.+.|++.|+++. ...+.|.||||+|||++++++++....... ..+ .++.++++.+....|.+.|+++|+
T Consensus 20 ~~i~~~~~~L~d~v~~~g--~~~vvvgLSGGvDSsv~a~La~~a~~~lg~--~~~~~~v~av~~~~~~~~d~~~A~~va~ 95 (271)
T 1kqp_A 20 QEIEDRVNFLKQYVKKTG--AKGFVLGISGGQDSTLAGRLAQLAVESIRE--EGGDAQFIAVRLPHGTQQDEDDAQLALK 95 (271)
T ss_dssp HHHHHHHHHHHHHHHHHT--CCEEEEECCSSHHHHHHHHHHHHHHHHHHH--TTCCCEEEEEECCSSSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC--CCCEEEECCCCHHHHHHHHHHHHHHHHhcc--cCCCceEEEEEeCCCCCCCHHHHHHHHH
Confidence 345667777888877653 346889999999999999999876521000 000 145666665433457899999999
Q ss_pred HhCC-cceEEEeChhHHHHHHHHHHHhh-ccCCcCcc-Cc---hHHHHHHHHHHHhcCCeEEEeccCccccccCcccc
Q 020993 169 YLGT-RHHEFHFTVQEGIDALEEVIYHI-ETYDVTTI-RA---STPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF 240 (319)
Q Consensus 169 ~lg~-~~~~~~~~~~~~~~~~~~~~~~~-e~~~~~~~-~~---~~~~~~l~~~a~~~g~~v~ltG~G~Delf~Gy~~~ 240 (319)
++|+ +|+++++++ ..+.+.+.+... +.+..... .+ .+.+..+...|.+.|.. +++|.+.||++.||...
T Consensus 96 ~lgi~~~~~i~i~~--~~~~~~~~l~~~~~~~~~~~~~~N~~aR~r~~~l~~~A~~~g~l-vl~tgn~~E~~~Gy~t~ 170 (271)
T 1kqp_A 96 FIKPDKSWKFDIKS--TVSAFSDQYQQETGDQLTDFNKGNVKARTRMIAQYAIGGQEGLL-VLGTDHAAEAVTGFFTK 170 (271)
T ss_dssp HHCCSEEEECCCHH--HHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHTCE-EBCCCCHHHHTTTCSCT
T ss_pred hcCCCeEEEeccHH--HHHHHHHHHhhhcCCCCcchhhhhHHHHHHHHHHHHHHHHCCCE-EEECccHHHhccCCccc
Confidence 9999 899988754 234343333332 22211111 01 12234455666667765 56666789999999743
No 7
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=99.30 E-value=5.6e-12 Score=109.84 Aligned_cols=71 Identities=31% Similarity=0.523 Sum_probs=62.4
Q ss_pred CcceeEEEEEEECC-CCEEEEEecCCCCcceEEEEecCCeEEEeecchhhhhccccceeeCCCcEEEecCCeEEEe
Q 020993 1 MLDGMFSFVLLDTR-DKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRW 75 (319)
Q Consensus 1 ~l~G~fa~~i~D~~-~~~l~l~rD~~G~kpLyy~~~~~~~~~fsSe~~~l~~~~~~i~~l~pG~~l~~~~~~~~~~ 75 (319)
+|+|+|||++||.. .++|+++||+ |||||... ++.++||||+++|.....++..||||+++.++.+.++.|
T Consensus 151 ~l~G~fa~~i~d~~~~~~l~~~Rd~---~PL~~~~~-~~~~~~aSE~~al~~~~~~~~~l~pG~~~~i~~~~~~~~ 222 (240)
T 1xff_A 151 QLRGAYGTVIMDSRHPDTLLAARSG---SPLVIGLG-MGENFIASDQLALLPVTRRFIFLEEGDIAEITRRSVNIF 222 (240)
T ss_dssp GCCEEEEEEEEETTCTTCEEEEEEB---SCCEEEEC-SSCEEEESSGGGTTTTCSEEEECCTTCEEEECSSCEEEE
T ss_pred hcccceEEEEEecCCCCEEEEEECC---CceEEEEe-CCEEEEEECHHHHHhhCCeEEEECCCEEEEEECCeEEEE
Confidence 48999999999985 6899999998 99999985 678999999999998888899999999999876655433
No 8
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=99.29 E-value=4.2e-12 Score=112.43 Aligned_cols=133 Identities=17% Similarity=0.123 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCC--CccHHHHHHHHHH
Q 020993 92 PLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEG--SPDLKAAREVADY 169 (319)
Q Consensus 92 ~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~--~~e~~~A~~va~~ 169 (319)
.+.+.+.|++.++.. ...+++++||||+||+++++++.+... .++.++++.+.. ..|.+.|+++|+.
T Consensus 9 ~~~l~~~l~~~v~~~--~~~~vvv~lSGGiDSsv~~~l~~~~~~---------~~v~av~~~~~~~~~~e~~~a~~~a~~ 77 (268)
T 1xng_A 9 IVYLCDFLEKEVQKR--GFKKVVYGLSGGLDSAVVGVLCQKVFK---------ENAHALLMPSSVSMPENKTDALNLCEK 77 (268)
T ss_dssp HHHHHHHHHHHHHHT--TCCCEEEECCSSHHHHHHHHHHHHHHG---------GGEEEEECCCSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh--CCCCEEEEccCcHHHHHHHHHHHHhCC---------CCEEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 344555555555442 346899999999999999999988762 367888887543 3578899999999
Q ss_pred hCCcceEEEeChhHHHHHHHHHHHhhccCC-cCccCchHHHHHHHHHHHhcCCeEEEeccCccccccCccc
Q 020993 170 LGTRHHEFHFTVQEGIDALEEVIYHIETYD-VTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLY 239 (319)
Q Consensus 170 lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf~Gy~~ 239 (319)
+|++|+++++++ ..+.+.+.+... .+. ...+.....+..+.+.|.+.|+.|+.||+ .||.+.||..
T Consensus 78 lgi~~~~i~i~~--~~~~~~~~~~~~-~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tg~-~~E~~~Gy~t 144 (268)
T 1xng_A 78 FSIPYTEYSIAP--YDAIFSSHFKDA-SLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSN-KSERMLGYGT 144 (268)
T ss_dssp HTCCEEECCCHH--HHHHHHHHCTTC-CHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCC-HHHHHHTCSC
T ss_pred cCCCEEEEeChH--HHHHHHHHhhhc-CCchHHHHHHHHHHHHHHHHHHHCCCEEEECCc-HHHHhcCccc
Confidence 999999987754 222221111000 010 00000012234566777888999888875 6899999853
No 9
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=99.27 E-value=1.6e-11 Score=105.09 Aligned_cols=157 Identities=18% Similarity=0.244 Sum_probs=93.6
Q ss_pred CCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCC--CCccHHHHHHHHHHhCCcceEEEeCh-hHHH-
Q 020993 110 DVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLE--GSPDLKAAREVADYLGTRHHEFHFTV-QEGI- 185 (319)
Q Consensus 110 ~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~--~~~e~~~A~~va~~lg~~~~~~~~~~-~~~~- 185 (319)
+.++++++|||+||+++++++.+.+ .++.++++.+. ...|.++++++|+++|++|++++++. .++.
T Consensus 3 ~~~v~v~lSGG~DS~~ll~ll~~~~----------~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~~~~~~~~~~ 72 (219)
T 3bl5_A 3 KEKAIVVFSGGQDSTTCLLWALKEF----------EEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLDMSLLNQLAP 72 (219)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHC----------SEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEECGGGGGGST
T ss_pred CCCEEEEccCcHHHHHHHHHHHHcC----------CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEeChHHhhhcc
Confidence 4579999999999999999998764 35777776543 34688999999999999999998864 2111
Q ss_pred -----HHHHHHHHhhccCCcCccCchHHHH--HHHHHHHhcCCeEEEeccCccccccCccccccCCChhHHHHHHHHHHH
Q 020993 186 -----DALEEVIYHIETYDVTTIRASTPMF--LMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIK 258 (319)
Q Consensus 186 -----~~~~~~~~~~e~~~~~~~~~~~~~~--~l~~~a~~~g~~v~ltG~G~Delf~Gy~~~~~~~~~~~~~~~~~~~~~ 258 (319)
+.+.........|. .++.+....| ++.+.|++.|+++++||+++|+. +||...+ ..+ .+.+.
T Consensus 73 ~~l~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~a~~~g~~~i~tG~~~dd~-~~~~~~~-----~~~----~~~l~ 141 (219)
T 3bl5_A 73 NALTRNDIEIEVKDGELPS-TFVPGRNLVFLSFASILAYQIGARHIITGVCETDF-SGYPDCR-----DEF----VKSCN 141 (219)
T ss_dssp GGGC--------------C-CCCTTHHHHHHHHHHHHHHHHTCSEEECCCCC-----CCGGGS-----HHH----HHHHH
T ss_pred cccccccccccccccCCCC-ceeechHHHHHHHHHHHHHHcCCCEEEEecccccc-CCCCCCC-----HHH----HHHHH
Confidence 11111000001121 1222222234 44677888899999999999995 6664321 111 11122
Q ss_pred HhhhhhccccchhhhccCceeccccCC---HHHHHHHhcC
Q 020993 259 ALHLYDCLRANKSTSAWGVEARVPFLD---KEFINTAMSI 295 (319)
Q Consensus 259 ~l~~~~l~r~dr~~~~~gve~r~Pfld---~~lve~~~~l 295 (319)
.+... ....++.+..|+++ .++.+++..+
T Consensus 142 ~~~~~--------~~~~~~~ii~PL~~~~K~ei~~~a~~~ 173 (219)
T 3bl5_A 142 VTVNL--------AMEKPFVIHTPLMWLNKAETWKLADEL 173 (219)
T ss_dssp HHHHH--------HHTSCCEEECTTTTCCHHHHHHHHHHT
T ss_pred HHHHh--------ccCCCeEEEeccccCCHHHHHHHHHHc
Confidence 21110 11246788999987 6788887754
No 10
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=99.20 E-value=2.4e-11 Score=119.13 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=94.7
Q ss_pred cHHHHHHHHHHHHHHHHhh--CCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCC--CccHHHHHHH
Q 020993 91 DPLVLRKAFEKAVVKRLMT--DVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEG--SPDLKAAREV 166 (319)
Q Consensus 91 ~~~~l~~~l~~av~~rl~~--~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~--~~e~~~A~~v 166 (319)
..+++.+.+...+++++.. ...+.+.||||+||+++++++.+.... .++.++++.... ..|.+.|+++
T Consensus 305 ~~~~~~~~~~~~l~~~~~~~g~~~vvvglSGGvDSsv~a~la~~alG~--------~~v~~v~m~~~~~~~~~~~~A~~l 376 (590)
T 3n05_A 305 ADEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGA--------QNVYGVSMPSKYSSDHSKGDAAEL 376 (590)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCEEEECCSSHHHHHHHHHHHHHHCG--------GGEEEEECCCSSCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHHHHhCc--------ccEEEEEECCCCCCHHHHHHHHHH
Confidence 4567778888888887754 357999999999999999999887531 368888887543 3578899999
Q ss_pred HHHhCCcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHHHHHHHHHHHhcCCeEEEeccCccccccCcccc
Q 020993 167 ADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF 240 (319)
Q Consensus 167 a~~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf~Gy~~~ 240 (319)
|+++|++|+++++++. .+.+...+. .+......+.....+..+...|.+.|..|+.|| +.||++.||...
T Consensus 377 a~~lgi~~~~i~i~~~--~~~~~~~l~-~~~~~~~n~~ar~r~~~l~~~A~~~g~~vl~TG-n~se~~~Gy~t~ 446 (590)
T 3n05_A 377 ARRTGLNFRTVSIEPM--FDAYMASLG-LTGLAEENLQSRLRGTTLMAISNQEGHIVLAPG-NKSELAVGYSTL 446 (590)
T ss_dssp HHHHTCEEEECCSHHH--HHHHHHHHC-CCTHHHHHHHHHHHHHHHHHHHHHHTCEEBCCC-CHHHHHHTCCCS
T ss_pred HHHcCCcEEEEEChHH--HHHHHHHhc-ccchhhhHHHHHHHHHHHHHHHHhcCCEEEeCC-CHHHHhcCchhh
Confidence 9999999999887642 222222111 000000011112334455666777899999999 789999998643
No 11
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=99.20 E-value=4.7e-10 Score=97.02 Aligned_cols=158 Identities=20% Similarity=0.248 Sum_probs=97.2
Q ss_pred CCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccC--CCCccHHHHHHHHHHhCCc-ceEEEeCh-hHHHH
Q 020993 111 VPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGL--EGSPDLKAAREVADYLGTR-HHEFHFTV-QEGID 186 (319)
Q Consensus 111 ~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~--~~~~e~~~A~~va~~lg~~-~~~~~~~~-~~~~~ 186 (319)
.++++++|||+||+++++++.+.+ .++.++++.+ ....|.+.|+++|+++|++ |++++++. .++..
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~~~~----------~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~~~~l~~~~~ 72 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQALQDY----------DDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLDVGLLNELAT 72 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHC----------SEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEECTHHHHTSH
T ss_pred CCEEEEecCcHHHHHHHHHHHHcC----------CCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEeChhHHHHhh
Confidence 368999999999999999998764 2566666544 3336888999999999999 99998872 22221
Q ss_pred -HHHHH---H----HhhccCCcCccCchHHHH--HHHHHHHhcCCeEEEeccCccccccCccccccCCChhHHHHHHHHH
Q 020993 187 -ALEEV---I----YHIETYDVTTIRASTPMF--LMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRK 256 (319)
Q Consensus 187 -~~~~~---~----~~~e~~~~~~~~~~~~~~--~l~~~a~~~g~~v~ltG~G~Delf~Gy~~~~~~~~~~~~~~~~~~~ 256 (319)
.+... + +..+.+..+++.+....| ++.+.|.+.|++++++|+.+|+.. ||+..+ ..+ .+.
T Consensus 73 ~~l~~~~~~v~~~~~~~~~~~~~~~~~R~~~~~~la~~~A~~~g~~~I~~G~~~~D~~-~~~~~r-----~~~----~~~ 142 (232)
T 2pg3_A 73 SSLTRDSIPVPDYDANAQGIPNTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFS-GYPDCR-----DEF----VKA 142 (232)
T ss_dssp HHHHHTTCCCCC---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCSCSSS-CCGGGS-----HHH----HHH
T ss_pred hhcccccccccccccccCCCCCCeEechHHHHHHHHHHHHHHcCcCEEEEccCccccC-CCCCCC-----HHH----HHH
Confidence 11110 0 000111111222222222 225667788999999999999875 454321 112 222
Q ss_pred HHHhhhhhccccchhhhccCceeccccCC---HHHHHHHhcCC
Q 020993 257 IKALHLYDCLRANKSTSAWGVEARVPFLD---KEFINTAMSID 296 (319)
Q Consensus 257 ~~~l~~~~l~r~dr~~~~~gve~r~Pfld---~~lve~~~~lp 296 (319)
++.+.. .++..++.+..|+++ .++++++..+.
T Consensus 143 ~~~~~~--------~~~~~~~~i~~PL~~~~K~ei~~~a~~~g 177 (232)
T 2pg3_A 143 LNQAIV--------LGIARDIRFETPLMWLNKAETWALADYYQ 177 (232)
T ss_dssp HHHHHH--------HHHTSCCEEECTTTTCCHHHHHHHHHHTT
T ss_pred HHHHHH--------HhCCCCeEEEEecCCCCHHHHHHHHHHcC
Confidence 222221 122356789999998 67999988764
No 12
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=1e-10 Score=99.15 Aligned_cols=109 Identities=22% Similarity=0.210 Sum_probs=72.7
Q ss_pred CCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCCCccHHHHHHHHHHhCCcceEEEeChhHHHHHHHH
Q 020993 111 VPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDALEE 190 (319)
Q Consensus 111 ~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~e~~~A~~va~~lg~~~~~~~~~~~~~~~~~~~ 190 (319)
.++++++|||+||++++.++.+.+ .++.++++.+....|..+++++|+.+|++|+++.++.....+.++.
T Consensus 7 ~kv~v~~SGG~DS~~ll~ll~~~g----------~~v~~~~v~~~~~~~~~~~~~~a~~lgi~~~~~~~~~~~~~~~~~~ 76 (203)
T 3k32_A 7 MDVHVLFSGGKDSSLSAVILKKLG----------YNPHLITINFGVIPSYKLAEETAKILGFKHKVITLDRKIVEKAADM 76 (203)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTT----------EEEEEEEEECSSSCTTHHHHHHHHHHTCEEEEEECCTHHHHHHHHH
T ss_pred CeEEEEEECcHHHHHHHHHHHHcC----------CCeEEEEEeCCCchHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHH
Confidence 468999999999999999987643 3577777655433488999999999999999999885422222222
Q ss_pred HHHhhccCCcCccCchHHHHHHHHHHHhcCCeEEEeccCccccc
Q 020993 191 VIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIF 234 (319)
Q Consensus 191 ~~~~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf 234 (319)
... ...|.. .+....+.+.+.+++ |+++++||+.+|+..
T Consensus 77 ~~~-~~~~~~---~c~~~~~~~l~~~A~-g~~~i~tGh~~dD~~ 115 (203)
T 3k32_A 77 IIE-HKYPGP---AIQYVHKTVLEILAD-EYSILADGTRRDDRV 115 (203)
T ss_dssp HHH-HSSSHH---HHHHHHHHHHHHHTT-TCSEEECCCCTTCCS
T ss_pred HHh-cCCCcc---HHHHHHHHHHHHHhc-CCCEEEECCCcccch
Confidence 221 111211 112222223333333 899999999999865
No 13
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=99.13 E-value=1.8e-10 Score=102.04 Aligned_cols=137 Identities=12% Similarity=0.059 Sum_probs=79.7
Q ss_pred HHHHHHHHhh---CCCeEEeecCcccHHHHHHHHHHHhhhhhhh-hhcCCCcceeeccCCCCccHHHHHHHHHHhCC-cc
Q 020993 100 EKAVVKRLMT---DVPFGVLLSGGLDSSLVAAVASRYLADSEAA-CQWGSQLHSFCIGLEGSPDLKAAREVADYLGT-RH 174 (319)
Q Consensus 100 ~~av~~rl~~---~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~e~~~A~~va~~lg~-~~ 174 (319)
...++..++. ...+.|.||||+||+++++++++....-... +..+.++.++++.+....|...|+++|+.+|+ +|
T Consensus 27 ~~~L~~~l~~~g~~~~vvvglSGGvDSsv~a~L~~~a~~~lg~~~~~~~~~v~av~~~~~~~~~~~dA~~va~~lgi~~~ 106 (275)
T 1wxi_A 27 VDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQPDRV 106 (275)
T ss_dssp HHHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSCTTHHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHHHcCCCCCEEEECcCcHHHHHHHHHHHHHHHHhccccccccceEEEEEeCCCCccCHHHHHHHHHHcCCCeE
Confidence 3444444432 3478999999999999999998875210000 00001577777765444588999999999999 89
Q ss_pred eEEEeChhHHHHHHHHHHHhhcc-CCcCccCc---hHHHHHHHHHHHhcCCeEEEeccCccccccCccc
Q 020993 175 HEFHFTVQEGIDALEEVIYHIET-YDVTTIRA---STPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLY 239 (319)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~e~-~~~~~~~~---~~~~~~l~~~a~~~g~~v~ltG~G~Delf~Gy~~ 239 (319)
+++++++ ..+.+.+....... +......+ ..-+..+...|.+.|..|+-|| ..+|.+.||..
T Consensus 107 ~~i~i~~--~~~~~~~~l~~~g~~~~~~~~~N~~aR~r~~~l~~~A~~~g~lvlgTg-n~~E~~~Gy~t 172 (275)
T 1wxi_A 107 LTVNIKG--AVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTD-HAAEAITGFFT 172 (275)
T ss_dssp EECCCHH--HHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCC-CHHHHTTTCSC
T ss_pred EEEecHH--HHHHHHHHHHhcCCCCCCchhhhhhhhHHHHHHHHHHHHCCCEEEECc-cHHHHccCccc
Confidence 9988754 23333322222111 11100001 1112334455666776665554 56788889864
No 14
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=99.13 E-value=4.8e-11 Score=104.24 Aligned_cols=132 Identities=17% Similarity=0.181 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHhh--CCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCC--CccHHHHHHHHH
Q 020993 93 LVLRKAFEKAVVKRLMT--DVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEG--SPDLKAAREVAD 168 (319)
Q Consensus 93 ~~l~~~l~~av~~rl~~--~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~--~~e~~~A~~va~ 168 (319)
+++.+.+...++..+.. ..++.++||||+||+++++++.+... .++.++++.... ..|.+.|+++|+
T Consensus 7 ~~~~~~l~~~l~d~v~~~g~~~vvv~lSGGiDSsv~a~l~~~~~g---------~~v~av~~~~~~~~~~~~~~a~~~a~ 77 (249)
T 3p52_A 7 QKITEKMCDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCKRALK---------ENVFALLMPTQISNKANLEDALRLCA 77 (249)
T ss_dssp HHHHHHHHHHHHHHHHTSSCSEEEEECCSSHHHHHHHHHHHHHHT---------TSEEEEECCSCCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHHHHcC---------CcEEEEEecCCCCCHHHHHHHHHHHH
Confidence 44555555555555443 45799999999999999999988742 478888876543 467889999999
Q ss_pred HhCCcceEEEeChhHHHHHHHHHHHhhccCCcCccCc---hHHHHHHHHHHHhcCCeEEEeccCccccccCccc
Q 020993 169 YLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRA---STPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLY 239 (319)
Q Consensus 169 ~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~---~~~~~~l~~~a~~~g~~v~ltG~G~Delf~Gy~~ 239 (319)
.+|++|+++++++ ..+.+. ....+++.....+ ..-+..+...|.+.|+.++-||+ .||++.||..
T Consensus 78 ~lgi~~~~v~i~~--~~~~~~---~~~~~~~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tgn-~se~~~g~~t 145 (249)
T 3p52_A 78 DLNLEYKIIEIQS--ILDAFI---KQSENTTLVSLGNFAARIRMSLLYDYSALKNSLVIGTSN-KSELLLGYGT 145 (249)
T ss_dssp HHTCEEEECCCHH--HHHHHH---TTCSCCCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCC-HHHHHHTCSC
T ss_pred HhCCCEEEEECcH--HHHHHH---HhccccCCccHhHHHHHHHHHHHHHHHHHCCCeEEeCCC-HHHHHccchh
Confidence 9999999877653 222221 1111111100000 11223456677788887666665 6777777753
No 15
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=99.13 E-value=5.8e-11 Score=103.76 Aligned_cols=134 Identities=15% Similarity=0.182 Sum_probs=85.9
Q ss_pred cHHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCC--CCccHHHHHHHHH
Q 020993 91 DPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLE--GSPDLKAAREVAD 168 (319)
Q Consensus 91 ~~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~--~~~e~~~A~~va~ 168 (319)
..+++.+.|++.|++. ....+.++||||+||+++++++.+.+. ...++++... ...|.+.|+++|+
T Consensus 12 ~~~~l~~~l~~~v~~~--~~~~vvv~lSGGiDSsv~a~l~~~~~~----------~~~av~~~~~~~~~~~~~~a~~~a~ 79 (249)
T 3fiu_A 12 YSQKLVNWLSDSCMNY--PAEGFVIGLSGGIDSAVAASLAVKTGL----------PTTALILPSDNNQHQDMQDALELIE 79 (249)
T ss_dssp HHHHHHHHHHHHHHTT--TCSEEEEECCSSHHHHHHHHHHHHTTS----------CEEEEECCCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh--CCCCEEEEecCcHHHHHHHHHHHHhCC----------CCEEEEecCCCCCHHHHHHHHHHHH
Confidence 3456666666666553 245789999999999999999988763 2337777653 2357889999999
Q ss_pred HhCCcceEEEeChhHHHHHHHHHHHhh-c---cCCcCccCc---hHHHHHHHHHHHhcCCeEEEeccCccccccCccc
Q 020993 169 YLGTRHHEFHFTVQEGIDALEEVIYHI-E---TYDVTTIRA---STPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLY 239 (319)
Q Consensus 169 ~lg~~~~~~~~~~~~~~~~~~~~~~~~-e---~~~~~~~~~---~~~~~~l~~~a~~~g~~v~ltG~G~Delf~Gy~~ 239 (319)
.+|++|+++++++ ..+.+.+.+... . .++..+..+ .+-+..+...|.+.|+.++.||+ .||.+.||..
T Consensus 80 ~lgi~~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~r~R~~~l~~~A~~~g~~vl~TGn-~sE~~~G~~t 154 (249)
T 3fiu_A 80 MLNIEHYTISIQP--AYEAFLASTQSFTNLQNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDN-ACEWYMGYFT 154 (249)
T ss_dssp HHTCEEEECCCHH--HHHHHHHHTGGGC------CHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCCC-HHHHHHTCSC
T ss_pred HhCCCEEEEEChH--HHHHHHHHHHhhccCCCCcChhHHHHHHHHHHHHHHHHHHHHcCCEEEECCC-HHHHhcCchh
Confidence 9999999988753 223222211100 1 111100000 11233456677788999999995 6788888863
No 16
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.11 E-value=1e-10 Score=112.38 Aligned_cols=68 Identities=24% Similarity=0.337 Sum_probs=58.5
Q ss_pred CcceeEEEEEEECCCCEEEEEecCCCCcceEEEEec--C--CeEEEeecchhhhhc-cccceeeCCCcEEEecC
Q 020993 1 MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGL--D--GSIWFASEMKALSDD-CERFISFPPGHIYSSKQ 69 (319)
Q Consensus 1 ~l~G~fa~~i~D~~~~~l~l~rD~~G~kpLyy~~~~--~--~~~~fsSe~~~l~~~-~~~i~~l~pG~~l~~~~ 69 (319)
+|+|+|||++|+.. ++|+++|||+|+|||||.+.. + +.++||||.++|... ++.|+.|+||+++.++.
T Consensus 162 ~l~G~fa~v~~~~~-~~l~a~RD~~GirPL~~g~~~~~~g~~~~~~ASE~~al~~~~~~~v~~l~PGe~v~i~~ 234 (504)
T 1ecf_A 162 LIRGAYACVAMIIG-HGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITE 234 (504)
T ss_dssp HCCEEEEEEEEETT-TEEEEEECTTCCSCCEEEEEECSSSCEEEEEESSTHHHHHHTCEEEEECCTTEEEEEET
T ss_pred hcCccceEEEEEcC-CeEEEEECCCCCCceEEeecccCCCceEEEEEeCchHhhccCccEEEECCCCeEEEEeC
Confidence 47899999999854 579999999999999999852 3 479999999999875 57899999999998863
No 17
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=98.98 E-value=9e-10 Score=108.31 Aligned_cols=67 Identities=33% Similarity=0.543 Sum_probs=60.3
Q ss_pred CcceeEEEEEEECCC-CEEEEEecCCCCcceEEEEecCCeEEEeecchhhhhccccceeeCCCcEEEecCCe
Q 020993 1 MLDGMFSFVLLDTRD-KSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERFISFPPGHIYSSKQGG 71 (319)
Q Consensus 1 ~l~G~fa~~i~D~~~-~~l~l~rD~~G~kpLyy~~~~~~~~~fsSe~~~l~~~~~~i~~l~pG~~l~~~~~~ 71 (319)
+|+|+|||++||..+ ++++++||+ +||||... ++.++||||+++|......+..|+||+++.++.+.
T Consensus 151 ~l~G~fa~~i~d~~~~~~l~~aRd~---~PL~~g~~-~~~~~~aSe~~al~~~~~~~~~l~~G~i~~i~~~~ 218 (608)
T 2bpl_A 151 QLRGAYGTVIMDSRHPDTLLAARSG---SPLVIGLG-MGENFIASDQLALLPVTRRFIFLEEGDIAEITRRS 218 (608)
T ss_dssp GCCSSEEEEEEETTCTTCEEEEEEB---SCCEEEEC-SSCEEEESSGGGTTTTCCEEEECCTTCEEEECSSC
T ss_pred hhcCceEEEEEecCCCCEEEEEECC---CceEEEEe-CCeEEEEechHHHHhcCCeEEEECCCeEEEEECCe
Confidence 589999999999987 899999998 99999985 67799999999999888899999999998876443
No 18
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=98.92 E-value=1.7e-09 Score=97.38 Aligned_cols=125 Identities=18% Similarity=0.199 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccC--CCCccHHHHHH-HHHHh
Q 020993 94 VLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGL--EGSPDLKAARE-VADYL 170 (319)
Q Consensus 94 ~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~--~~~~e~~~A~~-va~~l 170 (319)
.+.+...+.+++.+. ..+++++||||+||+++++++.+... .++.++++.. ....|.+.+++ +++++
T Consensus 5 ~~~~~~~~~ir~~v~-~~kvlvalSGGvDSsvla~ll~~~~g---------~~v~av~vd~g~~~~~e~~~~~~~~a~~l 74 (308)
T 2dpl_A 5 RFVEEKVREIRETVG-DSKAIIALSGGVDSSTAAVLAHKAIG---------DRLHAVFVNTGFLRKGEPEFVVKTFRDEF 74 (308)
T ss_dssp HHHHHHHHHHHHHHT-TSCEEEECCSSHHHHHHHHHHHHHHG---------GGEEEEEEECSCCCTTHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHhC-CCCEEEEEeChHHHHHHHHHHHHhhC---------CCEEEEEEcCCCCChHHHHHHHHHHHHHc
Confidence 344444555566554 46899999999999999999988742 3577776643 33467777887 56789
Q ss_pred CCcceEEEeChhHHHHHHHHHHHhhccCCcCc-cCchHHHHHHHHHHHhcCCeEEEeccCcccc
Q 020993 171 GTRHHEFHFTVQEGIDALEEVIYHIETYDVTT-IRASTPMFLMSRKIKSLGVKMVISGEGSDEI 233 (319)
Q Consensus 171 g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~~~~~l~~~a~~~g~~v~ltG~G~Del 233 (319)
|++|+.++++. .+.+.+. ....|.... +........+.+.|++.|++++++|+..|.+
T Consensus 75 gi~~~vv~~~~-~f~~~l~----~~~~pe~~~~~~~~~~~~~l~~~A~~~g~~~la~Gh~~dD~ 133 (308)
T 2dpl_A 75 GMNLHYVDAQD-RFFSALK----GVTDPEEKRKIIGRVFIEVFEEVAKKIGAEYLIQGTIAPDW 133 (308)
T ss_dssp CCEEEEEECHH-HHHHHTT----TCCCHHHHHHHHHHHHHHHHHHHHHHHTCSEEECCCCCC--
T ss_pred CCcEEEEECCH-HHHHhhh----CCCCHHHHHHHHHHHHHHHHHHHHHHcCcCEEEECCCCccc
Confidence 99999988753 2222111 001111000 0001122345667788899999999998743
No 19
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=98.91 E-value=2e-09 Score=99.50 Aligned_cols=113 Identities=20% Similarity=0.148 Sum_probs=75.8
Q ss_pred CCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCC--C--------CccHHHHHHHHHHhCCcceEEEe
Q 020993 110 DVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLE--G--------SPDLKAAREVADYLGTRHHEFHF 179 (319)
Q Consensus 110 ~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~--~--------~~e~~~A~~va~~lg~~~~~~~~ 179 (319)
..++.+++|||+||+++++++.+.+ .++.++++... + ..|.+.|+++|+.+|++|+++++
T Consensus 9 ~~kVlVa~SGGvDSsv~a~lL~~~G----------~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~~ 78 (376)
T 2hma_A 9 KTRVVVGMSGGVDSSVTALLLKEQG----------YDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVNF 78 (376)
T ss_dssp GSEEEEECCSSHHHHHHHHHHHHTT----------CEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCeEEEEEeCHHHHHHHHHHHHHcC----------CcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEeC
Confidence 3579999999999999999998864 35666665432 1 14678899999999999999998
Q ss_pred ChhHHHHH-HHHHH---HhhccCCcCccCchHH--HHHHHHHHHhcCCeEEEeccCccccc
Q 020993 180 TVQEGIDA-LEEVI---YHIETYDVTTIRASTP--MFLMSRKIKSLGVKMVISGEGSDEIF 234 (319)
Q Consensus 180 ~~~~~~~~-~~~~~---~~~e~~~~~~~~~~~~--~~~l~~~a~~~g~~v~ltG~G~Delf 234 (319)
+. ++.+. +...+ ..-.+|++ ++.+... +..+.+.|.+.|+++++||+.+|...
T Consensus 79 ~~-~~~~~v~~~~l~~y~~G~tpnp-c~~C~r~ik~~~l~~~A~~~G~d~IatGH~a~d~~ 137 (376)
T 2hma_A 79 EK-EYWDRVFEYFLAEYRAGRTPNP-DVMCNKEIKFKAFLDYAITLGADYVATGHYARVAR 137 (376)
T ss_dssp HH-HHHHHTHHHHHHHHHTTCCCCH-HHHHHHHTTTTHHHHHHHTTTCSEEECCCSEEEEE
T ss_pred hH-HHHHHHHHHHHHHHhcCCCCCh-HHHHHHHHHHHHHHHHHHhCCCCEEEECcchhhhh
Confidence 64 33222 11111 11133432 2221111 22456778889999999999999764
No 20
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=98.90 E-value=4.1e-09 Score=95.42 Aligned_cols=125 Identities=10% Similarity=0.081 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHH--HhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCC-cceeecc--CCC--CccHHHHHH
Q 020993 93 LVLRKAFEKAVVKR--LMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQ-LHSFCIG--LEG--SPDLKAARE 165 (319)
Q Consensus 93 ~~l~~~l~~av~~r--l~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~-~~~~t~~--~~~--~~e~~~A~~ 165 (319)
+.+.+.+.+++++. +....++.|++|||.||++++.++.+.... .|.+ +.++++. ... ..|..++++
T Consensus 5 ~~~~~~~~~~i~~~~l~~~~~~vlva~SGG~DS~~Ll~ll~~~~~~------~g~~~v~av~vd~g~r~~s~~~~~~v~~ 78 (317)
T 1wy5_A 5 SRVIRKVLALQNDEKIFSGERRVLIAFSGGVDSVVLTDVLLKLKNY------FSLKEVALAHFNHMLRESAERDEEFCKE 78 (317)
T ss_dssp HHHHHHHHHHHHHHCSCSSCCEEEEECCSSHHHHHHHHHHHHSTTT------TTCSEEEEEEEECCSSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCEEEEEecchHHHHHHHHHHHHHHHH------cCCCEEEEEEEECCCCcccHHHHHHHHH
Confidence 45667777788765 455678999999999999999999875321 1235 6666654 332 246788999
Q ss_pred HHHHhCCcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHHHH-HHHHHHHhcCCeEEEeccCccc
Q 020993 166 VADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMF-LMSRKIKSLGVKMVISGEGSDE 232 (319)
Q Consensus 166 va~~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-~l~~~a~~~g~~v~ltG~G~De 232 (319)
+|+.+|++++++.++...+.+. ...+. ...+....| .+.+.+.+.|+++++||+.+|+
T Consensus 79 ~a~~lgi~~~v~~~~~~~~~~~--------~~~~~-e~~ar~~Ry~~l~~~a~~~g~~~i~~Gh~~dD 137 (317)
T 1wy5_A 79 FAKERNMKIFVGKEDVRAFAKE--------NRMSL-EEAGRFLRYKFLKEILESEGFDCIATAHHLND 137 (317)
T ss_dssp HHHHHTCCEEEEECCHHHHHHH--------TTCCH-HHHHHHHHHHHHHHHHHHTTCSEEECCCCHHH
T ss_pred HHHHcCCcEEEEEEechhhhcc--------CCCCH-HHHHHHHHHHHHHHHHHHcCCCEEEEeCchhH
Confidence 9999999999999875432211 00110 000111223 4566778889999999999885
No 21
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=98.87 E-value=7.4e-09 Score=96.60 Aligned_cols=110 Identities=18% Similarity=0.143 Sum_probs=73.7
Q ss_pred CCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCCCccHHHHHHHHHHhCCc-ceEEEeChhHHHHH-
Q 020993 110 DVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTR-HHEFHFTVQEGIDA- 187 (319)
Q Consensus 110 ~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~e~~~A~~va~~lg~~-~~~~~~~~~~~~~~- 187 (319)
..++++++|||+||++++.++.+.+ .++.++++.+....|.+.++++|+.+|++ ++++++. +++.+.
T Consensus 5 ~~kVvvalSGGlDSsvll~lL~e~G----------~eV~av~vd~g~~~e~e~a~~~A~~lGi~~~~vvd~~-~ef~~~~ 73 (413)
T 2nz2_A 5 KGSVVLAYSGGLDTSCILVWLKEQG----------YDVIAYLANIGQKEDFEEARKKALKLGAKKVFIEDVS-REFVEEF 73 (413)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHTT----------EEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEECH-HHHHHHT
T ss_pred CCeEEEEEcChHHHHHHHHHHHHcC----------CEEEEEEEECCcHHHHHHHHHHHHHhCCCEEEEEeCh-HHHHHHH
Confidence 4579999999999999999998753 36788887665457899999999999998 7777765 334332
Q ss_pred HHHHHHhhccC-----CcCccCchHHHHHHHHHHHhcCCeEEEeccCc
Q 020993 188 LEEVIYHIETY-----DVTTIRASTPMFLMSRKIKSLGVKMVISGEGS 230 (319)
Q Consensus 188 ~~~~~~~~e~~-----~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~ 230 (319)
+...+.....+ .............+.+.|++.|+.++++|+.+
T Consensus 74 ~~~~i~~~a~~e~~y~~g~~~aRp~i~~~l~~~A~~~Ga~~IatGh~~ 121 (413)
T 2nz2_A 74 IWPAIQSSALYEDRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATG 121 (413)
T ss_dssp HHHHHHTTCCBTTTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCT
T ss_pred HHHHHHhCcccccccccccccchHHHHHHHHHHHHHcCCCEEEECCcC
Confidence 22222211111 10000001112345677888899999999987
No 22
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=98.87 E-value=2.8e-09 Score=94.23 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhh-hhcCCCcceeeccCCCCccHHHHHHHHHHh
Q 020993 92 PLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAA-CQWGSQLHSFCIGLEGSPDLKAAREVADYL 170 (319)
Q Consensus 92 ~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~-~~~~~~~~~~t~~~~~~~e~~~A~~va~~l 170 (319)
++.+.+.|++.+++. ....+.+.||||+||+++++++++....-... ...+.++.++++.+....+.+.|+++|+.+
T Consensus 24 i~~~v~~L~d~l~~~--g~~~vvvglSGGvDSal~a~l~~~A~~~Lg~~~~~~~~~v~av~~p~~~~~~~~~A~~~a~~l 101 (279)
T 3q4g_A 24 IERRVAFIKRKLTEA--RYKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGEQKDEDEAQLALSFI 101 (279)
T ss_dssp HHHHHHHHHHHHHHH--TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEECCSSSCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc--CCCCEEEEccCCHHHHHHHHHHHHHHHHhCcccccCCceEEEEEecCCChHHHHHHHHHHHHh
Confidence 344444444444442 23578999999999999999977653210000 000125677777655456788999999999
Q ss_pred CC-cceEEEeChhHHHHHHHH----HHHhh------ccCCcC---ccCchHHHHHHHHHHHhcCCeEEEeccCccccccC
Q 020993 171 GT-RHHEFHFTVQEGIDALEE----VIYHI------ETYDVT---TIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGG 236 (319)
Q Consensus 171 g~-~~~~~~~~~~~~~~~~~~----~~~~~------e~~~~~---~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf~G 236 (319)
|+ +|+++++++ ..+.+.. ..... ..+... ++.+..-+-.+...|.+.|.-|+=||+ .+|++.|
T Consensus 102 gi~~~~~i~i~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~NiqaR~R~~~Ly~~A~~~g~lVlgTgn-~sE~~~G 178 (279)
T 3q4g_A 102 RPTHSVSVNIKA--GVDGLHAASHHALANTGLIPSDPAKVDFIKGNVKARARMVAQYEIAGYVGGLVLGTDH-SAENITG 178 (279)
T ss_dssp CCSEEEECCCHH--HHHHHHHHHHHHHHHHTCSCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCCC-HHHHHHT
T ss_pred CCCeEEEEECHH--HHHHHHHHHHHHhhhhcccccCCCcccchhhhHHHHHHHHHHHHHHHHCCCEEecCcc-HHhhhcc
Confidence 99 888888764 2232221 11100 011100 011112233455556677765444554 6778888
Q ss_pred ccc
Q 020993 237 YLY 239 (319)
Q Consensus 237 y~~ 239 (319)
|..
T Consensus 179 y~T 181 (279)
T 3q4g_A 179 FYT 181 (279)
T ss_dssp CSC
T ss_pred chh
Confidence 864
No 23
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=98.86 E-value=6e-09 Score=96.71 Aligned_cols=108 Identities=15% Similarity=0.096 Sum_probs=72.8
Q ss_pred CCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCCCccHHHHHHHHHHhCC-cceEEEeChhHHHHH-H
Q 020993 111 VPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGT-RHHEFHFTVQEGIDA-L 188 (319)
Q Consensus 111 ~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~e~~~A~~va~~lg~-~~~~~~~~~~~~~~~-~ 188 (319)
.++.+++|||+|||++++++.+.+ ..+.++++......|.+.|+++|+++|+ +|+++++. +++.+. +
T Consensus 15 ~KVVVA~SGGlDSSv~a~~Lke~G----------~eViavt~d~Gq~~Ele~A~~vA~~lGi~~~~VvDl~-eef~~~v~ 83 (421)
T 1vl2_A 15 EKVVLAYSGGLDTSVILKWLCEKG----------FDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDLR-REFVTDYI 83 (421)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTT----------CEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEECH-HHHHHHTH
T ss_pred CCEEEEeCCcHHHHHHHHHHHHCC----------CeEEEEEEEcCCHHHHHHHHHHHHHcCCceEEEEecH-HHHHHhhh
Confidence 468999999999999999998864 3677777655444789999999999999 89999885 344433 2
Q ss_pred HHHHHhhccCCcCccCch------HHHHHHHHHHHhcCCeEEEeccCc
Q 020993 189 EEVIYHIETYDVTTIRAS------TPMFLMSRKIKSLGVKMVISGEGS 230 (319)
Q Consensus 189 ~~~~~~~e~~~~~~~~~~------~~~~~l~~~a~~~g~~v~ltG~G~ 230 (319)
...+.....+.. ..... ...-.+.+.|.+.|++.+.+|..+
T Consensus 84 ~p~i~~na~yeg-~Y~~g~~l~Rp~i~~~l~~~A~~~Gad~IA~G~~~ 130 (421)
T 1vl2_A 84 FTALLGNAMYEG-RYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATG 130 (421)
T ss_dssp HHHHTTTCCBTT-TBCCHHHHHHHHHHHHHHHHHHHHTCSEEECCCCT
T ss_pred hHHHhcCCcccC-ceeCCCcccHHHHHHHHHHHHHHcCCCEEEECCee
Confidence 122211100110 01111 111235567788999999999976
No 24
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=98.85 E-value=1.3e-08 Score=94.58 Aligned_cols=110 Identities=17% Similarity=0.196 Sum_probs=73.2
Q ss_pred CeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCCCccHHHHHHHHHHhCC-cceEEEeChhHHHHH-HH
Q 020993 112 PFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGT-RHHEFHFTVQEGIDA-LE 189 (319)
Q Consensus 112 ~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~e~~~A~~va~~lg~-~~~~~~~~~~~~~~~-~~ 189 (319)
++++++|||+||++++.++.+.. |..+.++++......|.+.++++|+.+|+ +++++++.. ++.+. ..
T Consensus 2 kVvva~SGG~DSsvll~ll~~~~---------g~~V~av~vd~g~~~e~e~a~~~A~~lGi~~~~vvd~~~-ef~~~~~~ 71 (400)
T 1kor_A 2 KIVLAYSGGLDTSIILKWLKETY---------RAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKE-EFVRDFVF 71 (400)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHH---------TCEEEEEEEESSCSSCHHHHHHHHHHHTCSEEEEEECHH-HHHHHTHH
T ss_pred cEEEEEeChHHHHHHHHHHHHhh---------CCcEEEEEEeCCCHHHHHHHHHHHHHhCCCeEEEEeCcH-HHHHHhhH
Confidence 57899999999999999998763 24677887755445789999999999999 688877753 33332 11
Q ss_pred HHHHhhccCCc----CccCc-hHHHHHHHHHHHhcCCeEEEeccCcc
Q 020993 190 EVIYHIETYDV----TTIRA-STPMFLMSRKIKSLGVKMVISGEGSD 231 (319)
Q Consensus 190 ~~~~~~e~~~~----~~~~~-~~~~~~l~~~a~~~g~~v~ltG~G~D 231 (319)
..+.....+.. ....+ ......+.+.|++.|++++++|+.+|
T Consensus 72 ~~i~~~~~~e~~y~~g~~~~R~~~~~~L~~~A~~~G~~~IatG~~~d 118 (400)
T 1kor_A 72 PMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGK 118 (400)
T ss_dssp HHHHTTCCBTTTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTT
T ss_pred HHHHcCCccccccccCCccchHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 22221111110 00001 11123566778888999999999986
No 25
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=98.79 E-value=1.2e-08 Score=94.43 Aligned_cols=112 Identities=24% Similarity=0.237 Sum_probs=74.0
Q ss_pred CCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccC--CC--------CccHHHHHHHHHHhCCcceEEEe
Q 020993 110 DVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGL--EG--------SPDLKAAREVADYLGTRHHEFHF 179 (319)
Q Consensus 110 ~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~--~~--------~~e~~~A~~va~~lg~~~~~~~~ 179 (319)
..++.|++|||+||+++++++.+.+ .++.++++.. .. ..|.+.|+++|+.+|++|+++++
T Consensus 17 ~~kVvVa~SGGvDSsv~a~lL~~~G----------~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd~ 86 (380)
T 2der_A 17 AKKVIVGMSGGVDSSVSAWLLQQQG----------YQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNF 86 (380)
T ss_dssp CCEEEEECCSCSTTHHHHHHHHTTC----------CEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEEEChHHHHHHHHHHHHcC----------CeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 4579999999999999999998764 3677776643 21 14678899999999999999998
Q ss_pred ChhHHHHHH-HHHH---HhhccCCcCccCchHH--HHHHHHHHHh-cCCeEEEeccCcccc
Q 020993 180 TVQEGIDAL-EEVI---YHIETYDVTTIRASTP--MFLMSRKIKS-LGVKMVISGEGSDEI 233 (319)
Q Consensus 180 ~~~~~~~~~-~~~~---~~~e~~~~~~~~~~~~--~~~l~~~a~~-~g~~v~ltG~G~Del 233 (319)
+. ++.+.+ ...+ ..-.+|++ ++.+... +-.+.+.|.+ .|++.+.||+.+|..
T Consensus 87 ~~-~f~~~v~~~~~~ey~~G~tpnp-c~~Cnr~ik~~~l~~~A~~~~Gad~IatGH~a~d~ 145 (380)
T 2der_A 87 AA-EYWDNVFELFLAEYKAGRTPNP-DILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRA 145 (380)
T ss_dssp HH-HHHHHTHHHHHHHHHTTCCCCH-HHHHHHHTTTTHHHHHHHHTTCCSEEECCCSCEEE
T ss_pred cH-HHHHHHHHHHHHHHHcCCCCCh-hHHHHHHHHHHHHHHHHHhhcCCCEEEEccccccc
Confidence 64 332221 1111 11123432 2221111 1245566777 899999999999864
No 26
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}
Probab=98.75 E-value=1.1e-08 Score=90.56 Aligned_cols=65 Identities=20% Similarity=0.185 Sum_probs=51.1
Q ss_pred EEEEEEECCCCEEEEEecC-CCCcceEEEEecC--CeEEEeecchhhhhccccceeeCCCcEEEecCCeEEE
Q 020993 6 FSFVLLDTRDKSFIAARDA-IGVTPLYMGWGLD--GSIWFASEMKALSDDCERFISFPPGHIYSSKQGGLRR 74 (319)
Q Consensus 6 fa~~i~D~~~~~l~l~rD~-~G~kpLyy~~~~~--~~~~fsSe~~~l~~~~~~i~~l~pG~~l~~~~~~~~~ 74 (319)
|+|+++|. ++|+++||+ +|++||+|+...+ +.++||||. |....+.++.|+||+++.++.+.++.
T Consensus 187 ~~~~~~d~--~~l~a~Rd~~~G~~Pll~~~~~~~~~~~~vASE~--l~~~~~~~~~v~pGeiv~i~~~~v~~ 254 (274)
T 3mdn_A 187 LSAAFSDG--QTLYAARYSSDHIAPSVYYRYSHARQGWAVVSEP--LETDEGDWTELRPGRMLTIGAEGAAE 254 (274)
T ss_dssp EEEEEECS--SCEEEEEEESSSCCCCCEEEEETTTTEEEEESSC--C--CCSCCEECCSSEEEEEETTEEEE
T ss_pred EEEEEEcC--CEEEEEECCCCCCCCeEEEEEeCCCCEEEEEecc--cccCCceEEEECcCEEEEEeCCeEEE
Confidence 99999985 689999999 9999965555433 789999998 33334679999999999998776544
No 27
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=98.71 E-value=1.4e-08 Score=89.92 Aligned_cols=133 Identities=17% Similarity=0.134 Sum_probs=75.1
Q ss_pred HHHHHHHhh--CCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCC--CcceeeccCCCCccHHHHHHHHHHhC-Ccce
Q 020993 101 KAVVKRLMT--DVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGS--QLHSFCIGLEGSPDLKAAREVADYLG-TRHH 175 (319)
Q Consensus 101 ~av~~rl~~--~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~--~~~~~t~~~~~~~e~~~A~~va~~lg-~~~~ 175 (319)
+.++.++.. ...+.+.||||+||+++++++++....-. ..+. .+.+++..+....+.+.|+++|+.+| ++|+
T Consensus 35 ~~L~d~l~~~g~~~vvvglSGGiDSal~a~La~~A~daLG---~~~~~~~viav~~p~~~~~~~~dA~~~a~~lg~i~~~ 111 (285)
T 3dpi_A 35 GFVADYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLR---ASGYDARFVAMRLPYGAQHDEADARRALAFVRADETL 111 (285)
T ss_dssp HHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHH---HTTCCCEEEEEECCSCC---CHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHcCCCcEEEEccCChhHHHHHHHHHHHHHHhc---ccCcccEEEEEEcCCCCHHHHHHHHHHHHHcCCCcEE
Confidence 555555543 35789999999999999887766431100 0012 35666665543456778999999999 6899
Q ss_pred EEEeChhHHHHHHHHHHHhhc-cC-----Cc---CccCchHHHHHHHHHHHhcCCeEEEeccCccccccCccc
Q 020993 176 EFHFTVQEGIDALEEVIYHIE-TY-----DV---TTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLY 239 (319)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~e-~~-----~~---~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf~Gy~~ 239 (319)
++++++ ..+.+.+.+.... ++ .. .++...+-+-.+...|.+.|+-|+-||+ .+|++.||..
T Consensus 112 ~i~i~~--~~~~~~~~l~~~g~~~~~~~~~~~~~~NiqaR~Rm~~L~~~A~~~g~lVlgTgn-~sE~~~Gy~T 181 (285)
T 3dpi_A 112 TVDVKP--AADAMLAALAAGGLAYLDHAQQDFVLGNIKARERMIAQYAVAGARNGVVIGTDH-AAESVMGFFT 181 (285)
T ss_dssp ECCCHH--HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCC-HHHHHHHHHH
T ss_pred EEEChH--HHHHHHHHHHhcCccccccCCCchhhhhHHHHHHHHHHHHHHHHCCCEEEeCcc-HHhhhCCccc
Confidence 988754 2333222221110 01 00 0111112233455667778876666665 5677788764
No 28
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=98.61 E-value=7.3e-08 Score=90.40 Aligned_cols=112 Identities=19% Similarity=0.123 Sum_probs=72.8
Q ss_pred HhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccC--CCCccHHHHHHHHHHhCC-cceEEEeChhH
Q 020993 107 LMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGL--EGSPDLKAAREVADYLGT-RHHEFHFTVQE 183 (319)
Q Consensus 107 l~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~--~~~~e~~~A~~va~~lg~-~~~~~~~~~~~ 183 (319)
+....++++++|||+||++++.++.+.+ ..+.++++.. ....|.+.|+++|+.+|+ +|+++++. ++
T Consensus 7 l~~~~KVvVA~SGGlDSSvll~~L~e~G----------~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD~~-ee 75 (455)
T 1k92_A 7 LPVGQRIGIAFSGGLDTSAALLWMRQKG----------AVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCR-KQ 75 (455)
T ss_dssp CCTTSEEEEECCSSHHHHHHHHHHHHTT----------CEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEECH-HH
T ss_pred hcCCCeEEEEEcChHHHHHHHHHHHHcC----------CEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEeCh-HH
Confidence 3445679999999999999999998753 4677777644 334588999999999999 89999885 34
Q ss_pred HHHHHHHHHHhhccC--CcC-ccCchHH------HHHHHHHHHhcCCeEEEeccC
Q 020993 184 GIDALEEVIYHIETY--DVT-TIRASTP------MFLMSRKIKSLGVKMVISGEG 229 (319)
Q Consensus 184 ~~~~~~~~~~~~e~~--~~~-~~~~~~~------~~~l~~~a~~~g~~v~ltG~G 229 (319)
+.+.+-..+.....+ ... +..+..+ .-.+.+.|++.|++.+.+|+-
T Consensus 76 f~~~v~p~i~~na~y~~eg~rcY~l~t~~aRp~i~~~l~e~A~e~Gad~IAtGht 130 (455)
T 1k92_A 76 LVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGST 130 (455)
T ss_dssp HHHHHHHHHHHTCCCCEETTEECCCHHHHHHHHHHHHHHHHHHHTTCCEEECCCC
T ss_pred HHHHhHHHHHcCCcccccCceecccCCcchHHHHHHHHHHHHHHcCCCEEEECCc
Confidence 443221222211001 000 0111111 124566788899999999994
No 29
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=98.59 E-value=1.3e-07 Score=89.99 Aligned_cols=119 Identities=13% Similarity=0.087 Sum_probs=77.0
Q ss_pred HHHHHHHH--HhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeecc--CCC---CccHHHHHHHHHHhC
Q 020993 99 FEKAVVKR--LMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIG--LEG---SPDLKAAREVADYLG 171 (319)
Q Consensus 99 l~~av~~r--l~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~--~~~---~~e~~~A~~va~~lg 171 (319)
+.+.+++. +....++.|++|||.||++++.++.+..... +.++.++++. ..+ ..|..+++++|+.+|
T Consensus 5 v~~~i~~~~l~~~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~------~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lg 78 (464)
T 3a2k_A 5 VRAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEW------KLQVIAAHVDHMFRGRESEEEMEFVKRFCVERR 78 (464)
T ss_dssp HHHHHHHTCSSSCSSBEEEECCSSHHHHHHHHHHHHHHHTT------TCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCCCEEEEEEcCcHHHHHHHHHHHHHHHHc------CCeEEEEEEECCCCccccHHHHHHHHHHHHHcC
Confidence 34555543 3456689999999999999999998754211 2456666654 432 146788999999999
Q ss_pred CcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHHHH-HHHHHHHhcCCeEEEeccCccc
Q 020993 172 TRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMF-LMSRKIKSLGVKMVISGEGSDE 232 (319)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-~l~~~a~~~g~~v~ltG~G~De 232 (319)
++++++.++...+.+. ...+. ...+....| ++.+.|.+.|+.+++||+-+|+
T Consensus 79 i~~~v~~~~~~~~~~~--------~~~~~-e~~aR~~Ry~~l~~~a~~~g~~~IatgH~~dD 131 (464)
T 3a2k_A 79 ILCETAQIDVPAFQRS--------AGLGA-QEAARICRYRFFAELMEKHQAGYVAVGHHGDD 131 (464)
T ss_dssp CEEEEEECCCHHHHTT--------TTCCS-HHHHHHHHHHHHHHHHHTTTCCEEECCCCHHH
T ss_pred CcEEEEEechhhhhhc--------cCCCH-HHHHHHHHHHHHHHHHHHcCcCEEEEeCChHH
Confidence 9999998875332110 01110 000111222 4556677889999999999885
No 30
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=98.57 E-value=1.2e-07 Score=91.39 Aligned_cols=126 Identities=18% Similarity=0.204 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeec--cCCCCccHHHHHH-HHHHh
Q 020993 94 VLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCI--GLEGSPDLKAARE-VADYL 170 (319)
Q Consensus 94 ~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~e~~~A~~-va~~l 170 (319)
.+.+.+.+.++..+.. .++.++||||+||+++++++.+... .+++++++ +.....|.+.+.+ +|+++
T Consensus 215 ~~~~~~i~~i~~~v~~-~kvlvalSGGvDSsvla~ll~~~~G---------~~v~av~vd~g~~~~~e~~~~~~~~a~~l 284 (527)
T 3tqi_A 215 HIIEDSIRDIQEKVGK-EQVIVGLSGGVDSAVTATLVHKAIG---------DQLVCVLVDTGLLRLNEVDEVLNVFQKHL 284 (527)
T ss_dssp HHHHHHHHHHHHHHTT-SCEEEECTTTHHHHHHHHHHHHHHG---------GGEEEEEECCSCSCTTHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHhcCC-CeEEEEEecCcCHHHHHHHHHHHhC---------CeEEEEEeccCCCChhHHHHHHHHHHHHc
Confidence 3344444555555544 7899999999999999999988742 35777766 4444467777765 99999
Q ss_pred CCcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHHHH-HHHHHHHhcCCeEEEeccCccccc
Q 020993 171 GTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMF-LMSRKIKSLGVKMVISGEGSDEIF 234 (319)
Q Consensus 171 g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-~l~~~a~~~g~~v~ltG~G~Delf 234 (319)
|++++.++++.. +.+.+. ....|......+...++ .+.+.|++.|++++++|+..|++.
T Consensus 285 gi~~~vv~~~~~-~~~~l~----g~~~~~~~r~~~~~~~~~~~~~~A~~~g~~~la~Gh~~dD~~ 344 (527)
T 3tqi_A 285 GAKVICVDAKDR-FMKALK----GISDPEEKRKIAGEQFIRVFEEQAKKLNVKWLGQGTIYPDVI 344 (527)
T ss_dssp CCEEEEECCHHH-HHSSSS----SCCCHHHHHHHHHHHHHHHHHHTTTTTTCCEEECCCCHHHHH
T ss_pred CCcEEEEeChHH-HHHhhc----CCCChhhhhhhhHHHHHHHHHHHHHHcCCCEEEccccCCccc
Confidence 999998876431 111110 00001000000001122 334567788999999999877764
No 31
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=98.56 E-value=1.2e-07 Score=91.38 Aligned_cols=124 Identities=15% Similarity=0.098 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccC--CCCccHHHHHH-HHHH
Q 020993 93 LVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGL--EGSPDLKAARE-VADY 169 (319)
Q Consensus 93 ~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~--~~~~e~~~A~~-va~~ 169 (319)
+.+.+.+.+.++..+.. .++.++||||+||+++++++.+... .++.++++.. ....|.+.+.+ +|++
T Consensus 211 ~~~~~~~~~~ir~~v~~-~~vvvalSGGvDSsv~a~ll~~a~G---------~~v~av~v~~g~~~~~e~~~~~~~la~~ 280 (525)
T 1gpm_A 211 AKIIDDAVARIREQVGD-DKVILGLSGGVDSSVTAMLLHRAIG---------KNLTCVFVDNGLLRLNEAEQVLDMFGDH 280 (525)
T ss_dssp HHHHHHHHHHHHHHHTT-CEEEEECCSSHHHHHHHHHHHHHHG---------GGEEEEEEECSCSCTTHHHHHHHHHTTT
T ss_pred HHHHHhhhhhhhhhhcc-cceEEEecCCCCHHHHHHHHHHHhC---------CCEEEEEEeCCCCCchHHHHHHHHHHHH
Confidence 45555555666666543 6899999999999999999988742 3677777643 33457777765 8999
Q ss_pred hCCcceEEEeChhHHHHHHHHHHHhhccCCcCc-cCchHHHHHHHHHHHhc-CCeEEEeccCcc
Q 020993 170 LGTRHHEFHFTVQEGIDALEEVIYHIETYDVTT-IRASTPMFLMSRKIKSL-GVKMVISGEGSD 231 (319)
Q Consensus 170 lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~~~~~l~~~a~~~-g~~v~ltG~G~D 231 (319)
+|++++.++++. .+.+.+.. ...|.... +........+.+.|++. |++.+++|+..|
T Consensus 281 lgi~~~~v~~~~-~f~~~l~~----~~~pe~~~~~~~~~~~~~l~~~A~~~~g~~~l~~Gt~~~ 339 (525)
T 1gpm_A 281 FGLNIVHVPAED-RFLSALAG----ENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYP 339 (525)
T ss_dssp TCCCEEEEECHH-HHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCCCHH
T ss_pred hCCcEEEEeccH-HHHHhhcC----CCChHHhhhhhhHHHHHHHHHHHHhcCCCCEEEeCCCCc
Confidence 999999988764 22222211 11111000 00001112345667777 899999999543
No 32
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=98.55 E-value=8.9e-08 Score=94.99 Aligned_cols=84 Identities=21% Similarity=0.181 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHhhC--CCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcC---CCcceeeccCCC--CccHHHHH
Q 020993 92 PLVLRKAFEKAVVKRLMTD--VPFGVLLSGGLDSSLVAAVASRYLADSEAACQWG---SQLHSFCIGLEG--SPDLKAAR 164 (319)
Q Consensus 92 ~~~l~~~l~~av~~rl~~~--~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~---~~~~~~t~~~~~--~~e~~~A~ 164 (319)
.+++.+.+...++++++.. ..+.+.||||+||++.+.++++....- | .++.++++.... ..+.+.|+
T Consensus 341 ~~~~~~~~~~~l~~~l~~~g~~~vvvglSGGvDSsvaa~l~~~a~~~l------g~~~~~v~~v~m~~~~~~~~~~~~A~ 414 (680)
T 3sdb_A 341 CYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDRE------GRPRSDILAFALPGFATGEHTKNNAI 414 (680)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCEEEEECCSSHHHHHHHHHHHHHHHHT------TCCGGGEEEEECCC--------CHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcEEEEecCCccHHHHHHHHHHHHHHh------CCCCceEEEEEECCCCCCHHHHHHHH
Confidence 3567777777888877644 469999999999998777776654210 1 357788776532 34677899
Q ss_pred HHHHHhCCcceEEEeCh
Q 020993 165 EVADYLGTRHHEFHFTV 181 (319)
Q Consensus 165 ~va~~lg~~~~~~~~~~ 181 (319)
++|+.+|++|+++++++
T Consensus 415 ~la~~lgi~~~~i~i~~ 431 (680)
T 3sdb_A 415 KLARALGVTFSEIDIGD 431 (680)
T ss_dssp HHHHHHTCEEEECCCHH
T ss_pred HHHHHcCCCEEEEECHH
Confidence 99999999999988764
No 33
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=98.52 E-value=2.5e-07 Score=88.76 Aligned_cols=123 Identities=15% Similarity=0.095 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeecc--CCCCccHHHHHHHHHHhC
Q 020993 94 VLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIG--LEGSPDLKAAREVADYLG 171 (319)
Q Consensus 94 ~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~--~~~~~e~~~A~~va~~lg 171 (319)
.+.+...+.+++++. +.++.+++|||+||+++++++.+.+ .++.++++. +....|.+.++++++.+|
T Consensus 194 ~~~~~~i~~ir~~~~-~~kvvvalSGGvDSsvla~ll~~~g----------~~v~av~vd~g~~~~~e~~~v~~~~~~lg 262 (503)
T 2ywb_A 194 HVLEELLREVRERAG-KDRVLLAVSGGVDSSTLALLLAKAG----------VDHLAVFVDHGLLRLGEREEVEGALRALG 262 (503)
T ss_dssp HHHHHHHHHHHHHHT-TSEEEEEECSSHHHHHHHHHHHHHT----------CEEEEEEEECSCSCTTHHHHHHHHHHHTT
T ss_pred hhhHHHHHhhhhhcc-CccEEEEecCCcchHHHHHHHHHcC----------CeEEEEEEeCCCCChHHHHHHHHHHHHhC
Confidence 344444455555553 3679999999999999999998873 367776654 333468889999999999
Q ss_pred CcceEEEeChhHHHHHHHHHHHhhccCCcCc-cCchHHHHHHHHHHHhc-CCeEEEeccCccc
Q 020993 172 TRHHEFHFTVQEGIDALEEVIYHIETYDVTT-IRASTPMFLMSRKIKSL-GVKMVISGEGSDE 232 (319)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~~~~~~~~l~~~a~~~-g~~v~ltG~G~De 232 (319)
++++.++++. .+.+.+. ....|.... +........+.+.|++. |++.+++|+..|.
T Consensus 263 i~~~vv~~~~-~f~~~l~----g~~~pe~~r~~~~~~~~~~l~~~A~~~~g~~~la~G~~~~D 320 (503)
T 2ywb_A 263 VNLLVVDAKE-RFLKALK----GVEDPEEKRKIIGREFVAAFSQVARERGPFRFLAQGTLYPD 320 (503)
T ss_dssp CCEEEEECHH-HHHHHHT----TCCCHHHHHHHHHHHHHHHHHHHHHHHCCCSEEECCCCHHH
T ss_pred CCEEEEECcH-HHHHhhc----CCCChHHHhhhhhHHHHHHHHHHHHhcCCCCEEEECCcCcc
Confidence 9999998753 2222211 111111000 00001112344556667 8999999997654
No 34
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=98.51 E-value=7.7e-07 Score=86.48 Aligned_cols=139 Identities=21% Similarity=0.177 Sum_probs=92.2
Q ss_pred cHHHHHHHHHHHHHHHHhh--CCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCCCc--cHHHHHHH
Q 020993 91 DPLVLRKAFEKAVVKRLMT--DVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSP--DLKAAREV 166 (319)
Q Consensus 91 ~~~~l~~~l~~av~~rl~~--~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~--e~~~A~~v 166 (319)
..+++.+.+.-.++.+++. -..+.+.||||+||+++++++.+.+.. .++.++++....+. ....|+++
T Consensus 279 ~~~~~~~a~~~gl~dy~~k~g~~~~vlglSGGiDSal~~~la~~alg~--------~~v~~v~mp~~~ts~~t~~~a~~l 350 (565)
T 4f4h_A 279 VEAQVYRALVLGVRDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGA--------ERVRAVMMPSRYTAGISTTDAADM 350 (565)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHCG--------GGEEEEECCCTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCcEEEecCCCccHHHHHHHHHHHhCC--------ccEEEEeccccccccchHHHHHHH
Confidence 3457777787888888764 356899999999999999999888754 36888888665544 35679999
Q ss_pred HHHhCCcceEEEeChhHHHHHHHHHHHhhccCCcC-----ccCchHHHHHHHHHHHhcCCeEEEeccCccccccCcccc
Q 020993 167 ADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVT-----TIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYF 240 (319)
Q Consensus 167 a~~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-----~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf~Gy~~~ 240 (319)
|+.+|+.|+++++++ ..+.+...+.+....... ++.+..-+-.|...|.+.|.-|+=||+ -+|+--||..+
T Consensus 351 a~~lg~~~~~i~i~~--~~~~~~~~~~~~~~~~~~d~~~eN~qaR~R~~~l~~~an~~g~lvlgTgn-~sE~a~Gy~T~ 426 (565)
T 4f4h_A 351 ARRVGVRYDEIAIAP--MFDAFRASLAAEFAGLAEDATEENIQARIRGTLLMALSNKFGSIVLTTGN-KSEMAVGYCTL 426 (565)
T ss_dssp HHHHTCEEEECCCHH--HHHHHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC-HHHHHHTCSCT
T ss_pred HHHhCCceeeeecch--HHHHHHHHhhhcccCccchhhHhhhcchhhHHHHHHHHhhcCCcccCCCc-hhhHhhccccc
Confidence 999999999988764 344443333221111000 111112233445556667776666774 67787898754
No 35
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=98.51 E-value=4.6e-07 Score=77.15 Aligned_cols=110 Identities=12% Similarity=0.072 Sum_probs=67.1
Q ss_pred CCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeec--cCCCCccHHHHHHHHHHhCCcceEEEeChhHHHHHH
Q 020993 111 VPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCI--GLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDAL 188 (319)
Q Consensus 111 ~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~e~~~A~~va~~lg~~~~~~~~~~~~~~~~~ 188 (319)
.++.|++|||.||++++.++.+... ++..+++ +.....+.++++++++.+|++++++..+.. ..+..
T Consensus 45 ~~v~Va~SGGkDS~vLL~ll~~~~~----------~v~~v~vd~g~~~~e~~~~v~~~~~~~gi~~~v~~~~~~-~~~~~ 113 (215)
T 1sur_A 45 GEYVLSSSFGIQAAVSLHLVNQIRP----------DIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATES-AAWQE 113 (215)
T ss_dssp SEEEEECCCCTTHHHHHHHHHHHST----------TCEEEEEECSCBCHHHHHHHHHHHHHTTCEEEEEECSSC-HHHHH
T ss_pred CCEEEEecCCHHHHHHHHHHHHhCC----------CCeEEEeeCCCCCHHHHHHHHHHHHHhCCcEEEEeCCCC-HHHHH
Confidence 4799999999999999999988752 4555554 443334578999999999999999876532 11111
Q ss_pred HHHHHhhccCCcC-ccCch-HH-HHHHHHHHHhcCCeEEEeccCccc
Q 020993 189 EEVIYHIETYDVT-TIRAS-TP-MFLMSRKIKSLGVKMVISGEGSDE 232 (319)
Q Consensus 189 ~~~~~~~e~~~~~-~~~~~-~~-~~~l~~~a~~~g~~v~ltG~G~De 232 (319)
.. .......++. ...+. .. ...+.+.+++.|+.++++|.-.|+
T Consensus 114 ~~-~g~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~i~~G~r~dd 159 (215)
T 1sur_A 114 AR-YGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQ 159 (215)
T ss_dssp HH-HCCGGGSHHHHHHHHHHHHTHHHHHHHHHHTTEEEEECCCCTTS
T ss_pred Hh-cCCCCCCCccHHHHHHHHHHHHHHHHHHHhcCCceEEEEeehhh
Confidence 11 0000000000 00000 00 012345566778889999999988
No 36
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=98.50 E-value=3.2e-07 Score=90.46 Aligned_cols=145 Identities=15% Similarity=0.132 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHhh--CCCeEEeecCcccHHHHHHHHH-------HHhhhhhhhhh--------c-----------
Q 020993 92 PLVLRKAFEKAVVKRLMT--DVPFGVLLSGGLDSSLVAAVAS-------RYLADSEAACQ--------W----------- 143 (319)
Q Consensus 92 ~~~l~~~l~~av~~rl~~--~~~v~v~LSGGlDSs~iaa~~~-------~~~~~~~~~~~--------~----------- 143 (319)
.+++...+...++.+++. ...+.+.||||+|||++|++++ +.....+-... .
T Consensus 283 ~~~~~~~~~~~l~d~~~~~g~~~vvlglSGGvDSsv~A~Lv~~~~~~a~~alG~~~v~~~~~~~~~~~~~~~~~~~~~~~ 362 (634)
T 3ilv_A 283 EFEFWEATSLGLFDYMRKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTAFLQKSNMETLFDLPALQHLPFEEQ 362 (634)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCGGGCCSSCSSCTTSHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEEccCCHHHHHHHHHHHHHHHHHHHHhCchhhhhhhhcccccccccccccccccc
Confidence 466777777777776653 4579999999999999998843 33221100000 0
Q ss_pred -----CCCcceeeccCCCC--ccHHHHHHHHHHhCCcceEEEeChhHHHHHHHHHHHh--hccCCcCc--c--Cc---hH
Q 020993 144 -----GSQLHSFCIGLEGS--PDLKAAREVADYLGTRHHEFHFTVQEGIDALEEVIYH--IETYDVTT--I--RA---ST 207 (319)
Q Consensus 144 -----~~~~~~~t~~~~~~--~e~~~A~~va~~lg~~~~~~~~~~~~~~~~~~~~~~~--~e~~~~~~--~--~~---~~ 207 (319)
+.-++|+.++..++ .+...|+++|+.+|++|+++++.+ ..+.+.+.+.. -.+|.... + .+ ..
T Consensus 363 ~~~~~~~~~~~v~m~~~~ss~~~~~dA~~la~~LGi~~~~IdI~~--~~~~~~~~~~~~~g~~p~~~~~~~~~~N~qaR~ 440 (634)
T 3ilv_A 363 AKKITAVFLTTAYQSTRNSGDETYTSAKTLAESIGATFYNWSVDE--EIEQYKATIENVIERPLTWEKDDITLQNIQARG 440 (634)
T ss_dssp HHHHHHHHEEEEEEECTTCCSHHHHHHHHHHHHHTCEEEEEECHH--HHHHHHHHHHHHTTSCCCTTTCHHHHHHHHHHT
T ss_pred hhHhhhheeeeeecCCCCCCHHHHHHHHHHHHHhCCcEEEEccHH--HHHHHHHHHHHhhCCCcccccCcchhhhhhHHH
Confidence 00044555554333 467889999999999999998864 22222222211 11121100 0 00 00
Q ss_pred HHHHHHHHHHhcCCeEEEeccCccccccCccc
Q 020993 208 PMFLMSRKIKSLGVKMVISGEGSDEIFGGYLY 239 (319)
Q Consensus 208 ~~~~l~~~a~~~g~~v~ltG~G~Delf~Gy~~ 239 (319)
-+-.+...|.+.|..|+-||+ -||+.-||..
T Consensus 441 R~~~l~~~A~~~g~lvlgTgn-ksE~~~Gy~T 471 (634)
T 3ilv_A 441 RAPIIWMLTNVKQALLITTSN-RSEGDVGYAT 471 (634)
T ss_dssp THHHHHHHHHHHTCEEBCCCC-HHHHHTTCSC
T ss_pred HHHHHHHHHHhcCCEEeccCc-hhhHhhCCcc
Confidence 112233445567876665654 6788888863
No 37
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=98.42 E-value=2.5e-06 Score=84.56 Aligned_cols=81 Identities=21% Similarity=0.211 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccC--CCCccHHHHHHHHHH
Q 020993 92 PLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGL--EGSPDLKAAREVADY 169 (319)
Q Consensus 92 ~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~--~~~~e~~~A~~va~~ 169 (319)
.+.+.+.+.+.+++.+. +.++.++||||+||+++++++.+...+ .++.++++.. ....|.+.|+++|+.
T Consensus 223 ~~~~~~~~i~~Ir~~v~-~~~vvv~lSGGvDSsVla~Ll~~alG~--------~~V~aV~vd~g~~~~~e~e~a~~~a~~ 293 (697)
T 2vxo_A 223 VQNRELECIREIKERVG-TSKVLVLLSGGVDSTVCTALLNRALNQ--------EQVIAVHIDNGFMRKRESQSVEEALKK 293 (697)
T ss_dssp HHHHHHHHHHHHHHHHT-TCEEEEECCSSHHHHHHHHHHHHHSCG--------GGEEEEEEECSCCCSSTTHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhc-ccceEEEccCchHHHHHHHHHHHhcCC--------ceEEEEEeccccCCcchHHHHHHHHHH
Confidence 34555556666666654 468999999999999999999987421 3677777643 334688899999999
Q ss_pred hCCcceEEEeCh
Q 020993 170 LGTRHHEFHFTV 181 (319)
Q Consensus 170 lg~~~~~~~~~~ 181 (319)
+|++++.++++.
T Consensus 294 lGI~~~vvdi~~ 305 (697)
T 2vxo_A 294 LGIQVKVINAAH 305 (697)
T ss_dssp TTCCEEEEECHH
T ss_pred hCCcEEEecchH
Confidence 999999998763
No 38
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=98.42 E-value=3.2e-07 Score=85.90 Aligned_cols=106 Identities=18% Similarity=0.204 Sum_probs=68.8
Q ss_pred CeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCC--C-CccHHHHHHHHHHh-----CCcceEEEeChhH
Q 020993 112 PFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLE--G-SPDLKAAREVADYL-----GTRHHEFHFTVQE 183 (319)
Q Consensus 112 ~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~--~-~~e~~~A~~va~~l-----g~~~~~~~~~~~~ 183 (319)
++.+++|||+||++++.++.+.+ .++.++++... . ..+.+.++++|+.+ |++++.++++..
T Consensus 189 kvlvalSGGvDS~vll~ll~~~G----------~~v~av~v~~~~~~~~~~~~~v~~~a~~l~~~~ggi~~~vv~~~~~- 257 (413)
T 2c5s_A 189 KVMVLLSGGIDSPVAAYLTMKRG----------VSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLHLVPFTEV- 257 (413)
T ss_dssp EEEEECCSSSHHHHHHHHHHHBT----------EEEEEEEEECTTTSCHHHHHHHHHHHHHHGGGSSCEEEEEEECHHH-
T ss_pred eEEEEeCCCChHHHHHHHHHHcC----------CcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEECcHH-
Confidence 47899999999999999998753 36677666532 2 23567788899999 899999887532
Q ss_pred HHHHHHHHHHhhccCCcCccCchHHHH-HHHHHHHhcCCeEEEeccCcccc
Q 020993 184 GIDALEEVIYHIETYDVTTIRASTPMF-LMSRKIKSLGVKMVISGEGSDEI 233 (319)
Q Consensus 184 ~~~~~~~~~~~~e~~~~~~~~~~~~~~-~l~~~a~~~g~~v~ltG~G~Del 233 (319)
...+.. ... ....++.+...+| .+.+.|.+.|+..++||+..|++
T Consensus 258 -~~~i~~---~~~-~~~~c~~~Rr~~~~~~~~~A~~~g~~~I~tG~~~dD~ 303 (413)
T 2c5s_A 258 -QKTINK---EIP-SSYSMTVMRRMMMRITERIAEERNALAITTGESLGQV 303 (413)
T ss_dssp -HHHHHH---HSC-GGGHHHHHHHHHHHHHHHHHHHTTCCEEECCCCSSST
T ss_pred -HHHHHh---cCC-cccHHHHHHHHHHHHHHHHHHHcCCCEEEEcccchhh
Confidence 111111 111 1101111111233 34566788999999999988865
No 39
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=98.32 E-value=2.3e-06 Score=80.62 Aligned_cols=111 Identities=14% Similarity=0.201 Sum_probs=70.1
Q ss_pred HHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeecc--CCCC--ccHHHHHHHHHHhCCcceEEE
Q 020993 103 VVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIG--LEGS--PDLKAAREVADYLGTRHHEFH 178 (319)
Q Consensus 103 v~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~--~~~~--~e~~~A~~va~~lg~~~~~~~ 178 (319)
+.+.+....++.|++|||+||++++.++.+..... .+.++.++++. .... .|..+++++|+.+|++++++.
T Consensus 6 l~~~l~~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~-----~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~ 80 (433)
T 1ni5_A 6 LNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTEN-----PGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVER 80 (433)
T ss_dssp HHHHHTTCSEEEEECCSBHHHHHHHHHHHHHHTTS-----TTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHhcCCCCEEEEEEcchHHHHHHHHHHHHHHHhc-----CCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEE
Confidence 34445566789999999999999999998754210 02356666654 3322 357789999999999999988
Q ss_pred eChhHHHHHHHHHHHhhccCCcCccCchHHHHHHHHHHHhcCCeEEEeccCccc
Q 020993 179 FTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDE 232 (319)
Q Consensus 179 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~De 232 (319)
++... ...+. ...+....|.+...+.+ ++.+++||+.+|.
T Consensus 81 ~~~~~------------~~~~~-e~~aR~~Ry~~l~~~a~-~~~~i~tgH~~dD 120 (433)
T 1ni5_A 81 VQLAQ------------EGLGI-EAQARQARYQAFARTLL-PGEVLVTAQHLDD 120 (433)
T ss_dssp CCCCC------------SSSTT-TTHHHHHHHHHHHHTCC-TTEEEECCCCHHH
T ss_pred ecCCC------------CCCCH-HHHHHHHHHHHHHHHHh-hCCeEEeeccchH
Confidence 76420 00110 00011223433333332 4899999999885
No 40
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=98.30 E-value=1.1e-06 Score=85.14 Aligned_cols=126 Identities=13% Similarity=0.184 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeec--cCCCCccHHHH-HHHHHH
Q 020993 93 LVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCI--GLEGSPDLKAA-REVADY 169 (319)
Q Consensus 93 ~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~e~~~A-~~va~~ 169 (319)
+.+.+...+.+++. ..+.++.++||||+||+++++++.+... .+++++++ +.....|.+.+ +.+++.
T Consensus 239 ~~~~~~~i~~ir~~-g~~~~vvvalSGGvDSsv~a~ll~~~~G---------~~v~~v~vd~g~~~~~e~~~~~~~~~~~ 308 (556)
T 3uow_A 239 IRYHELELKNIEKY-KHDHYVIAAMSGGIDSTVAAAYTHKIFK---------ERFFGIFIDNGLLRKNEAENVYTFLKST 308 (556)
T ss_dssp HHHHHHHHHHHGGG-TTTCEEEEECCSSHHHHHHHHHHHHHHG---------GGEEEEEEECSCSCTTHHHHHHHHHHHH
T ss_pred ccccccceeeeeec-CCCceEEEEcccCCCHHHHHHHHHHHhC---------CeEEEEEEecCCCChHHHHHHHHHHHHh
Confidence 34444444555555 3367899999999999999999988753 35777765 34444566666 568999
Q ss_pred h-CCcceEEEeChhHHHHHHHHHHHhhccCCcC-ccCchHHHHHHHHHHHhcCC----eEEEeccCcccc
Q 020993 170 L-GTRHHEFHFTVQEGIDALEEVIYHIETYDVT-TIRASTPMFLMSRKIKSLGV----KMVISGEGSDEI 233 (319)
Q Consensus 170 l-g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~~~~~l~~~a~~~g~----~v~ltG~G~Del 233 (319)
+ |++|+.++++. .+...+.. ...|... .+........+.+.|++.|. +.+.+|...|++
T Consensus 309 l~gi~~~~vd~~~-~f~~~l~g----~~~pe~kr~iig~~f~~vf~~~A~~~~~~~~~~~la~Gt~y~D~ 373 (556)
T 3uow_A 309 FPDMNITKIDASE-NFLSNLQG----VTDPEQKRKIIGKLFIEEFEKAVNNIDIDINKTFLLQGTLYPDI 373 (556)
T ss_dssp CTTSEEEEEECHH-HHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHHTTCCCGGGEEEECCCCHHHH
T ss_pred cCCCCeEEeccHH-HHHHhhcC----CCChHHHHHHHHHHHHHHHHHHHHHcCCcccccccccCccChHH
Confidence 9 99999998753 22222110 0111000 00000111234456666775 899999876544
No 41
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=98.19 E-value=7.6e-06 Score=73.97 Aligned_cols=112 Identities=10% Similarity=0.018 Sum_probs=67.4
Q ss_pred CCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeec--cCCCCccHHHHHHHHHHhCCcceEEEeChhHHHHH
Q 020993 110 DVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCI--GLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDA 187 (319)
Q Consensus 110 ~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~e~~~A~~va~~lg~~~~~~~~~~~~~~~~ 187 (319)
..++.+++|||.||++++.++.+..... +.++..+++ +.......++++++++.+|++++.+..... ....
T Consensus 46 ~~~ivVa~SGGkDS~vLL~Ll~~~~~~~------~~~i~vv~vDtg~~~~et~~~v~~~~~~~gi~l~v~~~~~~-~~~G 118 (325)
T 1zun_A 46 FDNPVMLYSIGKDSAVMLHLARKAFFPG------KLPFPVMHVDTRWKFQEMYRFRDQMVEEMGLDLITHINPDG-VAQG 118 (325)
T ss_dssp CSSEEEECCSSHHHHHHHHHHHHHHTTS------CCSSCEEEECCSCCCHHHHHHHHHHHHTTTCCEEEECC--------
T ss_pred CCCEEEEEcChHHHHHHHHHHHHhcccc------CCCEEEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCchH-HhcC
Confidence 3578999999999999999998875321 134555555 333334678999999999999988765421 1000
Q ss_pred HHHHHHhhccCCcCccCchHH-HHHHHHHHHhcCCeEEEeccCccccc
Q 020993 188 LEEVIYHIETYDVTTIRASTP-MFLMSRKIKSLGVKMVISGEGSDEIF 234 (319)
Q Consensus 188 ~~~~~~~~e~~~~~~~~~~~~-~~~l~~~a~~~g~~v~ltG~G~Delf 234 (319)
.+. +. ..+. ..+... ...+.+.+++.|++++++|.-.||--
T Consensus 119 ~~~--~~-~~~~---~cc~~~K~~pL~~~l~e~g~~~i~tG~R~Des~ 160 (325)
T 1zun_A 119 INP--FT-HGSA---KHTDIMKTEGLKQALDKHGFDAAFGGARRDEEK 160 (325)
T ss_dssp ----------CC---HHHHHHTHHHHHHHHHHHTCSEEECCCCTTSSG
T ss_pred CCc--cc-cChH---HHHHHHHHHHHHHHHHHcCCCEEEEecccchhh
Confidence 000 00 0010 000000 12345556667899999999999853
No 42
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.18 E-value=4e-06 Score=73.15 Aligned_cols=109 Identities=12% Similarity=0.094 Sum_probs=66.4
Q ss_pred CCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeec--cCCCCccHHHHHHHHHHhCCcceEEEeChhHHHHHH
Q 020993 111 VPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCI--GLEGSPDLKAAREVADYLGTRHHEFHFTVQEGIDAL 188 (319)
Q Consensus 111 ~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~e~~~A~~va~~lg~~~~~~~~~~~~~~~~~ 188 (319)
.++.+++|||.||++++.++.+... ++..+++ +.....+.++++++++.+|++++.+..+.. ..+..
T Consensus 46 ~~v~va~SGG~DS~vLL~ll~~~~~----------~v~vv~idtg~~~~et~~~~~~~~~~~gi~~~v~~~~~~-~~~~~ 114 (252)
T 2o8v_A 46 GEYVLSSSFGIQAAVSLHLVNQIRP----------DIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATES-AAWQE 114 (252)
T ss_dssp SCEEEECCCSTTHHHHHHHHHHHST----------TCEEEECCCSCBCHHHHHHHHHHHHHTTCEEEECCCSSC-HHHHH
T ss_pred CCEEEEeCCCHHHHHHHHHHHHhCC----------CCeEEEecCCCCCHHHHHHHHHHHHHhCCceEEEcCCCC-HHHHH
Confidence 4799999999999999999988752 4555554 333334578999999999999888765432 11111
Q ss_pred HHHHHhhccCCc-CccC--c-hHH-HHHHHHHHHhcCCeEEEeccCcccc
Q 020993 189 EEVIYHIETYDV-TTIR--A-STP-MFLMSRKIKSLGVKMVISGEGSDEI 233 (319)
Q Consensus 189 ~~~~~~~e~~~~-~~~~--~-~~~-~~~l~~~a~~~g~~v~ltG~G~Del 233 (319)
.. +. ..+.. +..+ + ... ...+.+.+++.|+.+++||.-.|+-
T Consensus 115 ~~--~g-~~~~~~~~~~~~cc~~~K~~pl~~~l~~~~~~~~~tG~r~dds 161 (252)
T 2o8v_A 115 AR--YG-KLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQS 161 (252)
T ss_dssp HH--TC-CGGGSHHHHHHHHHHHHTHHHHHHHHHHTTCSEEEECCCSTTT
T ss_pred HH--cC-CccccCCchHHHHHHHHHHHHHHHHHHhcCCcEEEEecccccc
Confidence 10 00 00000 0000 0 000 0123455667788899999999883
No 43
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=98.01 E-value=1.5e-05 Score=69.76 Aligned_cols=112 Identities=12% Similarity=0.015 Sum_probs=68.2
Q ss_pred CCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeec--cCCCCccHHHHHHHHHHhCC----cceEEEeCh---
Q 020993 111 VPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCI--GLEGSPDLKAAREVADYLGT----RHHEFHFTV--- 181 (319)
Q Consensus 111 ~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~e~~~A~~va~~lg~----~~~~~~~~~--- 181 (319)
.++.+.+|||.||++++.++.+.... +.++..+++ +.......++++++++++|+ +++++..+.
T Consensus 42 ~~v~va~SGGkDS~vLL~ll~~~~~~-------~~~i~vv~iDtg~~~~et~~~v~~~~~~~gl~~~~~l~v~~~~~~~~ 114 (261)
T 2oq2_A 42 PHLFQTTAFGLTGLVTIDMLSKLSEK-------YYMPELLFIDTLHHFPQTLTLKNEIEKKYYQPKNQTIHVYKPDGCES 114 (261)
T ss_dssp SSEEEECCCCHHHHHHHHHHHHHTTT-------SCCCEEEEECCSCBCHHHHHHHHHHHHHHTGGGTCCCEEECSTTCSS
T ss_pred CCEEEEecCCHHHHHHHHHHHHhCcc-------CCCeeEEEecCCCCCHHHHHHHHHHHHHhCCCCCCCeEEEecCCccC
Confidence 47999999999999999999887631 014555554 44333467899999999999 888876542
Q ss_pred -hHHHHHHHHHHHhhccCCcCccCchHH-HHHHHHHHHhcCCeEEEeccCcccc
Q 020993 182 -QEGIDALEEVIYHIETYDVTTIRASTP-MFLMSRKIKSLGVKMVISGEGSDEI 233 (319)
Q Consensus 182 -~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~l~~~a~~~g~~v~ltG~G~Del 233 (319)
.++.+..-...+... +. ..+... ..-+.+.+++.|+.++++|.-.||-
T Consensus 115 ~~~~~~~~G~~~~~~~-~~---~cc~~~K~~pl~~~l~~~g~~~~~tG~R~dds 164 (261)
T 2oq2_A 115 EADFASKYGDFLWEKD-DD---KYDYLAKVEPAHRAYKELHISAVFTGRRKSQG 164 (261)
T ss_dssp HHHHHHHHCTTHHHHC-HH---HHHHHHTHHHHHHHHHHTTCSEEECCCCGGGC
T ss_pred HHHHHHHhCCCccccC-hH---HHHHHHhHHHHHHHHHHcCCCEEEEeccccch
Confidence 121110000001000 10 000000 1123455667789999999999985
No 44
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=97.83 E-value=3.1e-05 Score=69.41 Aligned_cols=79 Identities=20% Similarity=0.203 Sum_probs=57.0
Q ss_pred CeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCCCccHHHHHHHHHHh-------CCcceEEE-eChhH
Q 020993 112 PFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYL-------GTRHHEFH-FTVQE 183 (319)
Q Consensus 112 ~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~e~~~A~~va~~l-------g~~~~~~~-~~~~~ 183 (319)
++.++||| +||++.++++.+.+ ..+.+.++.+ +..+.+.++++|+.+ +++++.++ +..
T Consensus 181 kvlvllSG-vDS~vaa~ll~~~G----------~~v~~v~~~~-~~~~~~~a~~~a~~l~~~~~~~~i~~~vv~~~~~-- 246 (307)
T 1vbk_A 181 RMIGILHD-ELSALAIFLMMKRG----------VEVIPVYIGK-DDKNLEKVRSLWNLLKRYSYGSKGFLVVAESFDR-- 246 (307)
T ss_dssp EEEEECSS-HHHHHHHHHHHHBT----------CEEEEEEESC-SSHHHHHHHHHHHHHHTTCTTSCCCCEEESSHHH--
T ss_pred cEEEEEeC-CcHHHHHHHHHhCC----------CeEEEEEEEE-CHHHHHHHHHHHHHHhhhccCCCCcEEEeCCCHH--
Confidence 57899999 99999999988765 4566666652 234667789999998 66666654 211
Q ss_pred HHHHHHHHHHhhccCCcCccCchHHHHHHHHHHHhcCCeEEEeccCccc
Q 020993 184 GIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDE 232 (319)
Q Consensus 184 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~De 232 (319)
. + +.|.+.|+..++||+.+++
T Consensus 247 ---~----------------------~---~~A~~~ga~~I~tG~~~~~ 267 (307)
T 1vbk_A 247 ---V----------------------L---KLIRDFGVKGVIKGLRPND 267 (307)
T ss_dssp ---H----------------------H---HHHHHHTCCEEECCCCGGG
T ss_pred ---H----------------------H---HHHHHcCCCEEEECcccch
Confidence 0 0 4456689999999998754
No 45
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=97.82 E-value=2e-05 Score=67.68 Aligned_cols=60 Identities=18% Similarity=0.074 Sum_probs=43.9
Q ss_pred CeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceee--ccCC------CCccHHHHHHHHHHhCCcceEEEeCh
Q 020993 112 PFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFC--IGLE------GSPDLKAAREVADYLGTRHHEFHFTV 181 (319)
Q Consensus 112 ~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t--~~~~------~~~e~~~A~~va~~lg~~~~~~~~~~ 181 (319)
++.+++|||+||++.++++.+.+. ++.++. ++.. ...+.+.|+++|+.+|++++.+++..
T Consensus 6 Kvvvl~SGGkDSs~al~~l~~~G~----------eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g 73 (237)
T 3rjz_A 6 DVAVLYSGGKDSNYALYWAIKNRF----------SVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQG 73 (237)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTC----------EEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--
T ss_pred EEEEEecCcHHHHHHHHHHHHcCC----------eEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCC
Confidence 689999999999999998887653 454442 2221 12456789999999999999998864
No 46
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=97.65 E-value=5.9e-05 Score=79.19 Aligned_cols=66 Identities=21% Similarity=0.265 Sum_probs=54.6
Q ss_pred CcceeEEEEEEECCCCEEEEEecCCCCcceEEEEecCCeEEEeecchhhhhccccc-e--eeCCCcEEEec
Q 020993 1 MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCERF-I--SFPPGHIYSSK 68 (319)
Q Consensus 1 ~l~G~fa~~i~D~~~~~l~l~rD~~G~kpLyy~~~~~~~~~fsSe~~~l~~~~~~i-~--~l~pG~~l~~~ 68 (319)
.++|.|++++-|. +.+..+|||.|.|||.|.+..++.+++|||..+|--....+ + +|.||..+.++
T Consensus 326 ~~dGp~slv~~dg--~~l~a~~DrnGlRPl~~g~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id 394 (1479)
T 1ea0_A 326 PWDGPAALAMTDG--RWVVGGMDRNGLRPMRYTITTDGLIIGGSETGMVKIDETQVIEKGRLGPGEMIAVD 394 (1479)
T ss_dssp CCCSSEEEEECSS--SEEEEECCTTCCSCCEEEEETTSEEEECSSSTTSCCCGGGEEEEEECCTTCEEEEE
T ss_pred cCCCcEEEEEEeC--CEEEEEecCCCCcceEEEEECCCEEEEEcccccccCcchheeeccCCCCCeEEEEE
Confidence 3689999999765 89999999999999999986567899999998885443333 3 89999998775
No 47
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=97.61 E-value=9.9e-05 Score=77.71 Aligned_cols=66 Identities=23% Similarity=0.181 Sum_probs=54.5
Q ss_pred CcceeEEEEEEECCCCEEEEEecCCCCcceEEEEecCCeEEEeecchhhhhcccc-ce--eeCCCcEEEec
Q 020993 1 MLDGMFSFVLLDTRDKSFIAARDAIGVTPLYMGWGLDGSIWFASEMKALSDDCER-FI--SFPPGHIYSSK 68 (319)
Q Consensus 1 ~l~G~fa~~i~D~~~~~l~l~rD~~G~kpLyy~~~~~~~~~fsSe~~~l~~~~~~-i~--~l~pG~~l~~~ 68 (319)
.++|.|++++-|. +.+..+|||.|.|||.|...+++.+++|||..+|--.... ++ +|.||..+.++
T Consensus 325 ~~dGpaalv~~dg--~~l~a~~DrnGlRPl~~~~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id 393 (1520)
T 1ofd_A 325 PWDGPALLVFSDG--KIVGAGLDRNGLRPARYCITKDDYIVLGSEAGVVDLPEVDIVEKGRLAPGQMIAVD 393 (1520)
T ss_dssp CCCSSEEEEEECS--SEEEEEECTTCCSCCEEEEETTCCEEEESSTTCSCCCGGGEEEEEECCTTCEEEEE
T ss_pred cCCCCEEEEEEeC--CEEEEEecCCCCCceEEEEeCCCEEEEEcccccccCcchheeeccCCCCCeEEEEE
Confidence 3689999999876 7999999999999999988756679999999888543333 33 89999998774
No 48
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=97.48 E-value=0.0005 Score=60.52 Aligned_cols=60 Identities=12% Similarity=0.143 Sum_probs=46.5
Q ss_pred CCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeec--cCCCCccHHHHHHHHHHhCCcceEEEeCh
Q 020993 111 VPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCI--GLEGSPDLKAAREVADYLGTRHHEFHFTV 181 (319)
Q Consensus 111 ~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~--~~~~~~e~~~A~~va~~lg~~~~~~~~~~ 181 (319)
.++.+.+| |.||++++.++.+.. .++..+++ +.......++++++++.+|++++.+..+.
T Consensus 55 ~~i~Va~S-GkDS~vLL~Ll~~~~----------~~i~vv~iDtg~~~~et~~~v~~~~~~~gi~l~v~~~~~ 116 (275)
T 2goy_A 55 DELWISFS-GAEDVVLVDMAWKLN----------RNVKVFSLDTGRLHPETYRFIDQVREHYGIAIDVLSPDP 116 (275)
T ss_dssp TTEEEECC-SSTTHHHHHHHHHHC----------TTCCEEEECCSCCCHHHHHHHHHHHHHHTCCCEEECCCH
T ss_pred CCEEEEee-cHHHHHHHHHHHHhC----------CCceEEEEeCCCCCHHHHHHHHHHHHHHCCeEEEEeCCc
Confidence 57999999 999999999998864 24555554 44333457899999999999999876653
No 49
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1
Probab=97.26 E-value=0.00025 Score=61.78 Aligned_cols=65 Identities=20% Similarity=0.128 Sum_probs=51.0
Q ss_pred eeEEEEEEECCCCEEEEEec----------CCCCcceEE-------EE---ecCCeEEEeecchhhhhccccceeeCCCc
Q 020993 4 GMFSFVLLDTRDKSFIAARD----------AIGVTPLYM-------GW---GLDGSIWFASEMKALSDDCERFISFPPGH 63 (319)
Q Consensus 4 G~fa~~i~D~~~~~l~l~rD----------~~G~kpLyy-------~~---~~~~~~~fsSe~~~l~~~~~~i~~l~pG~ 63 (319)
|.|++++.|. ++|+.+|| |+|.+||.. .. ..++.++||||. |- ..+.++.++||+
T Consensus 168 G~~n~~l~~g--~~l~a~rd~~L~~~~~~~p~g~rpL~~~~~~i~~g~~~~~~~~~~vvASE~--l~-~~~~wr~v~pGe 242 (257)
T 1te5_A 168 GVFNALISDG--DWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPDDVVTVIATEP--LT-DNENWTLQQSGE 242 (257)
T ss_dssp BCCEEEEESS--SCEEEECSSCEEEEEEESSCCCEEEECSSEEEEECCCSSTTCEEEEEESSC--SS-SSSSCEEECTTC
T ss_pred CcEEEEEEcC--CEEEEEEcCCceEEeecCCCcccccccccceeecccccCCCCCEEEEEeCc--cC-CCCCeeEeCCCE
Confidence 9999999876 67999999 999999965 10 113468999994 33 357899999999
Q ss_pred EEEecCCeEE
Q 020993 64 IYSSKQGGLR 73 (319)
Q Consensus 64 ~l~~~~~~~~ 73 (319)
.+.++.+.+.
T Consensus 243 ~v~i~~~~~~ 252 (257)
T 1te5_A 243 WVLWWGGEVL 252 (257)
T ss_dssp EEEEETTEEE
T ss_pred EEEEECCEEE
Confidence 9999877654
No 50
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=97.02 E-value=0.00068 Score=60.62 Aligned_cols=69 Identities=13% Similarity=0.002 Sum_probs=45.8
Q ss_pred CCeEEeecCcccHHHHHHHHHHHhhhhh----hhhh-------c-CCCcceeeccC--CCCccHHHHHHHHHHhCCcceE
Q 020993 111 VPFGVLLSGGLDSSLVAAVASRYLADSE----AACQ-------W-GSQLHSFCIGL--EGSPDLKAAREVADYLGTRHHE 176 (319)
Q Consensus 111 ~~v~v~LSGGlDSs~iaa~~~~~~~~~~----~~~~-------~-~~~~~~~t~~~--~~~~e~~~A~~va~~lg~~~~~ 176 (319)
.++++++|||.||++++.++.+...+.. ..++ . +.++..+++.. ......++++++++.+|++++.
T Consensus 54 ~~i~vafSGGKDS~VLL~L~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~~fpet~~fv~~~~~~ygl~l~v 133 (306)
T 2wsi_A 54 GEISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEETFPTLENFVLETSERYCLSLYE 133 (306)
T ss_dssp SSEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTTCCHHHHHHHHHHHHHTTEEEEE
T ss_pred CCEEEEecCCHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCeeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 3699999999999999999887642100 0000 0 13455665543 2223578999999999998877
Q ss_pred EEe
Q 020993 177 FHF 179 (319)
Q Consensus 177 ~~~ 179 (319)
+..
T Consensus 134 ~~~ 136 (306)
T 2wsi_A 134 SQR 136 (306)
T ss_dssp CCC
T ss_pred EeC
Confidence 654
No 51
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=96.00 E-value=0.011 Score=52.27 Aligned_cols=67 Identities=12% Similarity=0.059 Sum_probs=41.1
Q ss_pred CeEEeecCcccHHHHHHHHHHHhhhh----hhhh-------hc-CCCcceeeccCC-CCcc-HHHHHHHHHHhCCcceEE
Q 020993 112 PFGVLLSGGLDSSLVAAVASRYLADS----EAAC-------QW-GSQLHSFCIGLE-GSPD-LKAAREVADYLGTRHHEF 177 (319)
Q Consensus 112 ~v~v~LSGGlDSs~iaa~~~~~~~~~----~~~~-------~~-~~~~~~~t~~~~-~~~e-~~~A~~va~~lg~~~~~~ 177 (319)
.+++.+|||.||++++.++.+.+.+. ...+ .. ..++..+.+... ..+| .++..++++++|++.+.+
T Consensus 60 ~ialSfSGGKDStVLLhL~~kal~~~~~~~~~~~~~~~~~~~~p~~~ipvifiDTG~~FpET~ef~d~~~~~ygL~L~v~ 139 (308)
T 3fwk_A 60 EISFSYNGGKDCQVLLLLYLSCLWEYYIVKLSQSQFDGKFHRFPLTKLPTVFIDHDDTFKTLENFIEETSLRYSLSLYES 139 (308)
T ss_dssp SEEEECCSSHHHHHHHHHHHHHHHHHHTCCE-----------------EEEECCCTTCCHHHHHHHHHHHHHTTEEEEEC
T ss_pred CEEEEecCChhHHHHHHHHHHHhhhhcccccccccccccccccCCCCccEEEEeCCCCCHHHHHHHHHHHHHhCCcEEEe
Confidence 59999999999999999998764210 0000 00 024455554332 1233 578999999999876654
Q ss_pred E
Q 020993 178 H 178 (319)
Q Consensus 178 ~ 178 (319)
.
T Consensus 140 ~ 140 (308)
T 3fwk_A 140 D 140 (308)
T ss_dssp C
T ss_pred C
Confidence 3
No 52
>2xn6_B Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y T44; 1.29A {Homo sapiens} PDB: 2xn5_B* 2xn7_B*
Probab=34.85 E-value=50 Score=18.48 Aligned_cols=20 Identities=20% Similarity=0.514 Sum_probs=13.2
Q ss_pred cceeEEEEEEECCCCE-EEEE
Q 020993 2 LDGMFSFVLLDTRDKS-FIAA 21 (319)
Q Consensus 2 l~G~fa~~i~D~~~~~-l~l~ 21 (319)
.|=.|.|+|+|..++. ||++
T Consensus 7 ~drPFlf~I~~~~t~~iLF~G 27 (35)
T 2xn6_B 7 IDRSFMLLILERSTRSILFLG 27 (35)
T ss_dssp CCBCEEEEEEETTTTEEEEEE
T ss_pred ecCCEEEEEEECCCCcEEEEE
Confidence 3556888888877664 4444
No 53
>1hle_B Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Probab=34.01 E-value=52 Score=17.76 Aligned_cols=20 Identities=15% Similarity=0.266 Sum_probs=13.0
Q ss_pred cceeEEEEEEECCCCE-EEEE
Q 020993 2 LDGMFSFVLLDTRDKS-FIAA 21 (319)
Q Consensus 2 l~G~fa~~i~D~~~~~-l~l~ 21 (319)
.|=.|.|+|+|..++. |+++
T Consensus 6 ~drPFlf~I~~~~t~~iLF~G 26 (31)
T 1hle_B 6 ADHPFIFFIRHNPSANILFLG 26 (31)
T ss_dssp CCSCEEEEEEETTTTEEEEEE
T ss_pred EeCCEEEEEEECCCCcEEEEE
Confidence 3456888888877664 3443
No 54
>2riv_B Thyroxine-binding globulin; TBG, serpin, cleaved, mutation, glycoprotein, secreted, signaling protein; 1.50A {Homo sapiens} PDB: 2riw_B* 2xn3_B*
Probab=33.76 E-value=50 Score=19.13 Aligned_cols=21 Identities=19% Similarity=0.532 Sum_probs=13.7
Q ss_pred cceeEEEEEEECCCCE-EEEEe
Q 020993 2 LDGMFSFVLLDTRDKS-FIAAR 22 (319)
Q Consensus 2 l~G~fa~~i~D~~~~~-l~l~r 22 (319)
.|=.|.|+|+|..++. ||++|
T Consensus 12 ~drPFlf~I~~~~t~~iLF~G~ 33 (40)
T 2riv_B 12 IDRSFMLLILERSTRSILFLGK 33 (40)
T ss_dssp CCBCEEEEEEETTTTEEEEEEE
T ss_pred ecCCEEEEEEeCCCCcEEEEEE
Confidence 3556888888877664 44443
No 55
>4afx_B Protein Z dependent protease inhibitor; hydrolase inhibitor, serpin, protein Z dependent inhibitor, coagulation; 2.09A {Homo sapiens} PDB: 4aju_B
Probab=32.80 E-value=47 Score=18.73 Aligned_cols=20 Identities=15% Similarity=0.418 Sum_probs=13.4
Q ss_pred cceeEEEEEEECCCCE-EEEE
Q 020993 2 LDGMFSFVLLDTRDKS-FIAA 21 (319)
Q Consensus 2 l~G~fa~~i~D~~~~~-l~l~ 21 (319)
.|-.|.|+|+|..++. ||++
T Consensus 8 ~drPFlf~I~~~~t~~iLF~G 28 (36)
T 4afx_B 8 IDRPFHFMIYEETSGMLLFLG 28 (36)
T ss_dssp CCSCEEEEEEETTTTEEEEEE
T ss_pred eeCCEEEEEEECCCCcEEEEE
Confidence 4557888888877665 3444
No 56
>2h4p_B MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus gallus} PDB: 2h4q_B
Probab=31.30 E-value=59 Score=17.97 Aligned_cols=15 Identities=27% Similarity=0.538 Sum_probs=10.7
Q ss_pred ceeEEEEEEECCCCE
Q 020993 3 DGMFSFVLLDTRDKS 17 (319)
Q Consensus 3 ~G~fa~~i~D~~~~~ 17 (319)
|=.|.|+|+|..++.
T Consensus 8 drPFlf~I~~~~t~~ 22 (34)
T 2h4p_B 8 DHPFHFFIRHNKSKT 22 (34)
T ss_dssp CSCEEEEEEETTTTE
T ss_pred cCCEEEEEEECCCCe
Confidence 456888888876664
No 57
>1vyi_A RNA polymerase alpha subunit; transferase, replication, transcription, RNA-directed RNA polymerase, phosphorylation; HET: GOL; 1.5A {Rabies virus} SCOP: d.293.1.1
Probab=29.80 E-value=20 Score=25.40 Aligned_cols=30 Identities=17% Similarity=0.189 Sum_probs=26.6
Q ss_pred CHHHHHHHhcCCccccccCCCcchhHHHhh
Q 020993 285 DKEFINTAMSIDPEWKMVWEFSYIVLHFIL 314 (319)
Q Consensus 285 d~~lve~~~~lp~~~k~~~~~~~~~~r~~~ 314 (319)
..++|.-+.++|.-.++...+.|++||-||
T Consensus 49 lDdIv~~a~~iPgv~~~a~~G~kLPLRCiL 78 (112)
T 1vyi_A 49 LDDIVKEAKNVPGVTRLAHDGSKIPLRCVL 78 (112)
T ss_dssp HHHHHHHHTTSTTHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHhcCCchHHHHhhcCccchhhee
Confidence 357899999999999999989999999876
No 58
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=29.48 E-value=1.4e+02 Score=26.98 Aligned_cols=118 Identities=12% Similarity=0.107 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCCCccHHHHHHHHHHhCCcc
Q 020993 95 LRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRH 174 (319)
Q Consensus 95 l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~e~~~A~~va~~lg~~~ 174 (319)
..+.|++.+.+.... +-++.+++|. +++.+++.+ .... |..+.+-...+. .-......+++.+|.+.
T Consensus 83 ~~~~le~~lA~l~g~--~~~v~~~sG~-~Ai~~al~a-l~~~-------Gd~Vi~~~~~y~--~~~~~~~~~~~~~G~~~ 149 (430)
T 3ri6_A 83 TVEDLEQRLKNLTGA--LGVLALGSGM-AAISTAILT-LARA-------GDSVVTTDRLFG--HTLSLFQKTLPSFGIEV 149 (430)
T ss_dssp HHHHHHHHHHHHHTC--SEEEEESCHH-HHHHHHHHH-HCCT-------TCEEEEETTCCH--HHHHHHHTHHHHTTCEE
T ss_pred HHHHHHHHHHHHHCC--CcEEEECCHH-HHHHHHHHH-HhCC-------CCEEEEcCCCch--hHHHHHHHHHHHcCCEE
Confidence 344555555655433 3478999997 333333322 2321 233333222221 12223344678889887
Q ss_pred eEEEeChhHHHHHHHHHHH------hhccCCcCccCchHHHHHHHHHHHhcCCeEEEeccC
Q 020993 175 HEFHFTVQEGIDALEEVIY------HIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEG 229 (319)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~------~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G 229 (319)
..++.+. .+.+++.+. ..+.|.+++... ...-.+.+.+++.|+.+++..--
T Consensus 150 ~~v~~~d---~~~l~~ai~~~t~~v~~e~p~NptG~~-~dl~~i~~la~~~g~~livD~a~ 206 (430)
T 3ri6_A 150 RFVDVMD---SLAVEHACDETTKLLFLETISNPQLQV-ADLEALSKVVHAKGIPLVVDTTM 206 (430)
T ss_dssp EEECTTC---HHHHHHHCCTTEEEEEEESSCTTTCCC-CCHHHHHHHHHTTTCCEEEECTT
T ss_pred EEeCCCC---HHHHHHhhCCCCeEEEEECCCCCCCee-cCHHHHHHHHHHcCCEEEEECCC
Confidence 7776542 233333221 134454332211 12335667788888888887543
No 59
>3ndd_B Alpha-1-antitrypsin; serpin, hydrolase inhibitor; 1.50A {Homo sapiens} PDB: 1ezx_B 3ndf_B 7api_B* 8api_B* 9api_B* 2d26_B
Probab=28.83 E-value=49 Score=18.67 Aligned_cols=21 Identities=19% Similarity=0.556 Sum_probs=13.6
Q ss_pred cceeEEEEEEECCCCE-EEEEe
Q 020993 2 LDGMFSFVLLDTRDKS-FIAAR 22 (319)
Q Consensus 2 l~G~fa~~i~D~~~~~-l~l~r 22 (319)
+|-.|.|+|+|..++. ||++|
T Consensus 8 ~drPFlf~I~~~~t~~iLF~G~ 29 (36)
T 3ndd_B 8 FNKPFVFLMIEQNTKSPLFMGK 29 (36)
T ss_dssp CCSCEEEEEEETTTCCEEEEEE
T ss_pred eeCCEEEEEEECCCCcEEEEEE
Confidence 4557888888876654 44443
No 60
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=26.46 E-value=3e+02 Score=23.47 Aligned_cols=130 Identities=8% Similarity=-0.008 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHh-hhhh--hhh-hcCCCcceeeccCCCCccHHHHHHHHH
Q 020993 93 LVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYL-ADSE--AAC-QWGSQLHSFCIGLEGSPDLKAAREVAD 168 (319)
Q Consensus 93 ~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~-~~~~--~~~-~~~~~~~~~t~~~~~~~e~~~A~~va~ 168 (319)
.++.+.+.+.+.+.+..+..-.+..+||..+..++..+.... .... ... ..+..+.+..-.+. . ....++
T Consensus 68 ~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~---~---~~~~~~ 141 (397)
T 3f9t_A 68 KLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHF---S---FEKGRE 141 (397)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCT---H---HHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchh---H---HHHHHH
Confidence 456666777777776544445578888888765544332211 0000 000 00122322222221 1 344566
Q ss_pred HhCCcceEEEeChhH--HHHHHHHHHHh-------hccCCcCccCchHHHHHHHHHHHhcCCeEEEeccC
Q 020993 169 YLGTRHHEFHFTVQE--GIDALEEVIYH-------IETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEG 229 (319)
Q Consensus 169 ~lg~~~~~~~~~~~~--~~~~~~~~~~~-------~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G 229 (319)
.+|.+...+.++.+. -.+.+++.+.. ...|..++-. ..+.-.+.+.+++.|+-+++.+--
T Consensus 142 ~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~-~~~l~~i~~l~~~~~~~li~Dea~ 210 (397)
T 3f9t_A 142 MMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGT-IDNIEELSKIAKENNIYIHVDAAF 210 (397)
T ss_dssp HHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCC-BCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCC-CCCHHHHHHHHHHhCCeEEEEccc
Confidence 779887777765321 12334433322 1223221110 112334667777788888877643
No 61
>3mmt_A Fructose-bisphosphate aldolase; ssgcid, structural genomics, seattle structural GE center for infectious disease, hydrolase; HET: 2FP; 2.35A {Bartonella henselae} SCOP: c.1.10.0
Probab=26.30 E-value=1.1e+02 Score=27.11 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=25.3
Q ss_pred cHHHHHHHHHHHHHHHHhhCCCeEEeecCccc
Q 020993 91 DPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLD 122 (319)
Q Consensus 91 ~~~~l~~~l~~av~~rl~~~~~v~v~LSGGlD 122 (319)
..+++.+.--.++++.++..+|-.++||||.-
T Consensus 241 s~eevA~~Tv~~L~rtVP~avpGI~FLSGGqS 272 (347)
T 3mmt_A 241 SVEEVAEKTVHVLKQTVPAAVPGIAFLSGGQT 272 (347)
T ss_dssp CHHHHHHHHHHHHHHHSCTTSCEEEECCTTCC
T ss_pred CHHHHHHHHHHHHHhhCCcccCcceecCCCCC
Confidence 45677776677788888888888899999973
No 62
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=25.79 E-value=3e+02 Score=24.53 Aligned_cols=117 Identities=14% Similarity=0.100 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHHHhhhhhhhhhcCCCcceeeccCCCCccHHHHHHHHHHhCCcc
Q 020993 95 LRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASRYLADSEAACQWGSQLHSFCIGLEGSPDLKAAREVADYLGTRH 174 (319)
Q Consensus 95 l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~e~~~A~~va~~lg~~~ 174 (319)
..+.|++.+.+... .+-++..+||... +..++...... |..+.+..-.+. .-....+.+++.+|.+.
T Consensus 82 ~~~~l~~~la~~~g--~~~~~~~~sG~~A--i~~al~~l~~~-------Gd~Vi~~~~~y~--~~~~~~~~~~~~~g~~~ 148 (414)
T 3ndn_A 82 TVSVFEERLRLIEG--APAAFATASGMAA--VFTSLGALLGA-------GDRLVAARSLFG--SCFVVCSEILPRWGVQT 148 (414)
T ss_dssp HHHHHHHHHHHHHT--CSEEEEESSHHHH--HHHHHHTTCCT-------TCEEEEESCCCH--HHHHHHHTHHHHTTCEE
T ss_pred HHHHHHHHHHHHHC--CCcEEEECCHHHH--HHHHHHHHhCC-------CCEEEEcCCccc--hHHHHHHHHHHHcCcEE
Confidence 44455555555543 3457899999554 33333322221 234443332222 12233455567789887
Q ss_pred eEEEeChhHHHHHHHHHHH------hhccCCcCccCchHHHHHHHHHHHhcCCeEEEecc
Q 020993 175 HEFHFTVQEGIDALEEVIY------HIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGE 228 (319)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~------~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~ 228 (319)
..++.+. .+.+++.+. ..+.|.+++... ...-.+.+.+++.|+.+++..-
T Consensus 149 ~~v~~~d---~~~l~~ai~~~t~~v~le~p~NptG~~-~~l~~i~~la~~~g~~livDe~ 204 (414)
T 3ndn_A 149 VFVDGDD---LSQWERALSVPTQAVFFETPSNPMQSL-VDIAAVTELAHAAGAKVVLDNV 204 (414)
T ss_dssp EEECTTC---HHHHHHHTSSCCSEEEEESSCTTTCCC-CCHHHHHHHHHHTTCEEEEECT
T ss_pred EEeCCCC---HHHHHHhcCCCCeEEEEECCCCCCCcc-ccHHHHHHHHHHcCCEEEEECC
Confidence 7776542 233333321 124444332211 1233566777788888887654
No 63
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=24.50 E-value=39 Score=28.16 Aligned_cols=41 Identities=12% Similarity=0.083 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHH
Q 020993 92 PLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASR 132 (319)
Q Consensus 92 ~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~ 132 (319)
.+.+.+.+.+.++..+.......+.||||--=..+...+.+
T Consensus 18 ~~~~A~~i~~~i~~~i~~~~~~~l~lsgGstp~~~y~~L~~ 58 (233)
T 3nwp_A 18 EQQLASKIASQLQEAVDARGKASLVVSGGSTPLKLFQLLSM 58 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCEEEEECCSSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHHh
Confidence 34455555555555555557788999999654555555543
No 64
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=24.45 E-value=39 Score=28.10 Aligned_cols=40 Identities=20% Similarity=0.074 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHH
Q 020993 92 PLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVAS 131 (319)
Q Consensus 92 ~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~ 131 (319)
.+.+.+.+.+.++..+.......+.||||--=..+...+.
T Consensus 15 ~~~~A~~i~~~i~~~i~~~~~~~l~lsgGstp~~~y~~L~ 54 (232)
T 3lhi_A 15 AQSLADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALS 54 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCEEEEECCSSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHHHH
Confidence 3444445545555555555678899999964444444444
No 65
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=23.60 E-value=1.1e+02 Score=24.40 Aligned_cols=59 Identities=24% Similarity=0.360 Sum_probs=35.4
Q ss_pred ccHHH---HHHHHHHhCCcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHHHHHHHHHHHhcCCeEEEeccCccccc
Q 020993 158 PDLKA---AREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIF 234 (319)
Q Consensus 158 ~e~~~---A~~va~~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf 234 (319)
.|.+. |.++.+.+|+++..--++.-. +|. .++-+.+.+.++|++|++.|-|+..-+
T Consensus 33 SD~~v~~~a~~~L~~~gI~~e~~V~SAHR-------------tp~--------~l~~~~~~a~~~g~~ViIa~AG~aahL 91 (181)
T 4b4k_A 33 SDWETMKYACDILDELNIPYEKKVVSAHR-------------TPD--------YMFEYAETARERGLKVIIAGAGGAAHL 91 (181)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEEEECCTTT-------------SHH--------HHHHHHHHTTTTTCCEEEEEECSSCCH
T ss_pred hHHHHHHHHHHHHHHcCCCeeEEEEcccc-------------ChH--------HHHHHHHHHHhcCceEEEEeccccccc
Confidence 45544 556778889886554443211 111 122334556678999999999987655
Q ss_pred cCc
Q 020993 235 GGY 237 (319)
Q Consensus 235 ~Gy 237 (319)
.|-
T Consensus 92 pGv 94 (181)
T 4b4k_A 92 PGM 94 (181)
T ss_dssp HHH
T ss_pred hhh
Confidence 543
No 66
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=23.13 E-value=1.8e+02 Score=21.75 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHh----hCCCeEEeecCcccHHHHHHHH
Q 020993 92 PLVLRKAFEKAVVKRLM----TDVPFGVLLSGGLDSSLVAAVA 130 (319)
Q Consensus 92 ~~~l~~~l~~av~~rl~----~~~~v~v~LSGGlDSs~iaa~~ 130 (319)
++.+.+.+.+..+.... .+.|+.|.-+.|++=|.+.+++
T Consensus 87 ~~~~~~~i~~~~~~~~~~~~~~~~~vlVHC~aG~~RTg~~~a~ 129 (167)
T 3s4o_A 87 LDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGRAPILVAL 129 (167)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCCEEEEECSSSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccCCCcEEEECCCCCCHHHHHHHH
Confidence 45566666555554332 2689999999999987555444
No 67
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=22.98 E-value=71 Score=26.50 Aligned_cols=42 Identities=17% Similarity=-0.001 Sum_probs=26.1
Q ss_pred CccHHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHH
Q 020993 89 PYDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVA 130 (319)
Q Consensus 89 ~~~~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~ 130 (319)
++..+...+.+.+.++..+....+..+.||||--=..+...+
T Consensus 23 ~~l~~~aA~~i~~~i~~~~~~~~~~~l~LsgGsTp~~ly~~L 64 (232)
T 1vl1_A 23 DGYVDFVVEKIRTKMEKLLEEKDKIFVVLAGGRTPLPVYEKL 64 (232)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHCSCEEEEECCSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCCccHHHHHHHH
Confidence 444555666666666665555667889999995444444333
No 68
>1m93_C Serine proteinase inhibitor 2; serpin, CRMA, apoptosis, ICE inhibitor, viral protein; 1.65A {Cowpox virus} SCOP: e.1.1.1 PDB: 1c8o_B 1f0c_B
Probab=22.70 E-value=98 Score=17.97 Aligned_cols=20 Identities=25% Similarity=0.419 Sum_probs=10.3
Q ss_pred ceeEEEEEEECCCCEEEEEe
Q 020993 3 DGMFSFVLLDTRDKSFIAAR 22 (319)
Q Consensus 3 ~G~fa~~i~D~~~~~l~l~r 22 (319)
|=.|.|+|+|....-||++|
T Consensus 15 drPFlf~I~~~~~~iLF~G~ 34 (41)
T 1m93_C 15 DHPFIYVIRHVDGKILFVGR 34 (41)
T ss_dssp CSCEEEEEEETTSCEEEEEE
T ss_pred eCCEEEEEEECCCCEEEEEE
Confidence 44566667665422344443
No 69
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=22.42 E-value=1.4e+02 Score=23.51 Aligned_cols=59 Identities=15% Similarity=0.189 Sum_probs=33.1
Q ss_pred ccHHH---HHHHHHHhCCcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHHHHHHHHHHHhcCCeEEEeccCccccc
Q 020993 158 PDLKA---AREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIF 234 (319)
Q Consensus 158 ~e~~~---A~~va~~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf 234 (319)
.|.+. |..+++.+|+++..--.+.....+. +.-+.+.+.++|++|++.|-|+.--+
T Consensus 17 SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~---------------------~~~~~~~a~~~g~~ViIa~AG~aa~L 75 (169)
T 3trh_A 17 SDLSTMETAFTELKSLGIPFEAHILSAHRTPKE---------------------TVEFVENADNRGCAVFIAAAGLAAHL 75 (169)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHH---------------------HHHHHHHHHHTTEEEEEEEECSSCCH
T ss_pred HhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHH---------------------HHHHHHHHHhCCCcEEEEECChhhhh
Confidence 56554 4556788898865433332111111 12223445667888888888877554
Q ss_pred cCc
Q 020993 235 GGY 237 (319)
Q Consensus 235 ~Gy 237 (319)
.|.
T Consensus 76 pgv 78 (169)
T 3trh_A 76 AGT 78 (169)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 70
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=22.12 E-value=68 Score=26.52 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHH
Q 020993 93 LVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASR 132 (319)
Q Consensus 93 ~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~ 132 (319)
+.+.+.+.+.++..+.......+.||||--=..+...+.+
T Consensus 15 ~~~A~~i~~~i~~~i~~~~~~~l~LsgGstp~~~y~~L~~ 54 (226)
T 3lwd_A 15 ERLADTVAQALEADLAKRERALLVVSGGSTPKPFFTSLAA 54 (226)
T ss_dssp HHHHHHHHHHHHHHHTTSSCEEEEECCSSTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHHh
Confidence 4455555555666666677889999999644444444443
No 71
>3mbd_A Fructose-bisphosphate aldolase; glycolysis, lyase, schiff base; 2.00A {Encephalitozoon cuniculi} PDB: 3mbf_A* 3qrh_A
Probab=22.01 E-value=1.9e+02 Score=25.41 Aligned_cols=42 Identities=19% Similarity=0.180 Sum_probs=29.5
Q ss_pred cHHHHHHHHHHHHHHHHhhCCCeEEeecCccc---HHHHHHHHHH
Q 020993 91 DPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLD---SSLVAAVASR 132 (319)
Q Consensus 91 ~~~~l~~~l~~av~~rl~~~~~v~v~LSGGlD---Ss~iaa~~~~ 132 (319)
..+++.+.--.++++..+..+|=.++||||.- .|+-+-.+.+
T Consensus 240 s~eeVA~~Tv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~ 284 (342)
T 3mbd_A 240 TPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINM 284 (342)
T ss_dssp CHHHHHHHHHHHHHHHCCTTCCEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhc
Confidence 45677777777788888888888899999973 4444434433
No 72
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=21.70 E-value=52 Score=28.00 Aligned_cols=42 Identities=12% Similarity=0.075 Sum_probs=26.6
Q ss_pred ccHHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHH
Q 020993 90 YDPLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVAS 131 (319)
Q Consensus 90 ~~~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~ 131 (319)
+..+.+.+.+.+.++..+.......+.||||--=..+...+.
T Consensus 15 ~l~~~~A~~i~~~i~~~i~~~~~~~l~LsgGstP~~ly~~L~ 56 (266)
T 3eb9_A 15 ELSAAGCRKIVEIIEASGSQQWPLSIALAGGSTPKMTYARLH 56 (266)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCSEEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHHH
Confidence 334556666666666666667788999999953334444444
No 73
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=21.52 E-value=1.2e+02 Score=23.93 Aligned_cols=58 Identities=21% Similarity=0.326 Sum_probs=33.2
Q ss_pred ccHHH---HHHHHHHhCCcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHHHHHHHHHHHhcCCeEEEeccCccccc
Q 020993 158 PDLKA---AREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIF 234 (319)
Q Consensus 158 ~e~~~---A~~va~~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf 234 (319)
.|.+. |..+++.+|+++..--.+.....+. +.-+.+.++++|++|++.|-|+.--+
T Consensus 23 SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~---------------------l~~~~~~a~~~g~~ViIa~AG~aahL 81 (173)
T 4grd_A 23 SDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDE---------------------MFDYAEKARERGLRAIIAGAGGAAHL 81 (173)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHH---------------------HHHHHHHHTTTTCSEEEEEEESSCCH
T ss_pred hHHHHHHHHHHHHHHcCCCEEEEEEccccCHHH---------------------HHHHHHHHHhcCCeEEEEeccccccc
Confidence 46544 5567788898865433332111111 22234556667888888888877554
Q ss_pred cC
Q 020993 235 GG 236 (319)
Q Consensus 235 ~G 236 (319)
.|
T Consensus 82 pg 83 (173)
T 4grd_A 82 PG 83 (173)
T ss_dssp HH
T ss_pred hh
Confidence 44
No 74
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=20.72 E-value=1.3e+02 Score=23.77 Aligned_cols=58 Identities=17% Similarity=0.271 Sum_probs=31.4
Q ss_pred ccHHH---HHHHHHHhCCcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHHHHHHHHHHHhcCCeEEEeccCccccc
Q 020993 158 PDLKA---AREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIF 234 (319)
Q Consensus 158 ~e~~~---A~~va~~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf 234 (319)
.|.+. |..+++.+|+++..--.+.....+.+ .-+.+.+.++|++|++.|-|+.--+
T Consensus 18 SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~---------------------~~~~~~a~~~g~~ViIa~AG~aa~L 76 (174)
T 3lp6_A 18 SDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAM---------------------FSYARGAAARGLEVIIAGAGGAAHL 76 (174)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHH---------------------HHHHHHHHHHTCCEEEEEEESSCCH
T ss_pred HhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHH---------------------HHHHHHHHhCCCCEEEEecCchhhh
Confidence 46554 55567888998654333321111111 1223445556777888877776544
Q ss_pred cC
Q 020993 235 GG 236 (319)
Q Consensus 235 ~G 236 (319)
.|
T Consensus 77 pg 78 (174)
T 3lp6_A 77 PG 78 (174)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 75
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=20.43 E-value=52 Score=28.07 Aligned_cols=41 Identities=15% Similarity=0.059 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHH
Q 020993 92 PLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASR 132 (319)
Q Consensus 92 ~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~ 132 (319)
.+.+.+.+.+.++..+.......+.||||--=..+...+.+
T Consensus 36 ~~~~A~~i~~~i~~ai~~~~~~~l~LsgGstP~~~y~~L~~ 76 (268)
T 3ico_A 36 VAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSA 76 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHH
T ss_pred hhhhcchhhhHhHHHHHhcCceEEEEecCCchhHHHHHHHH
Confidence 34445555555555444457788999999432344444443
No 76
>1as4_B Antichymotrypsin, ACT; serpin, serine protease inhibitor; 2.10A {Homo sapiens} SCOP: e.1.1.1 PDB: 2ach_B* 3caa_B 4caa_B
Probab=20.37 E-value=62 Score=18.36 Aligned_cols=19 Identities=16% Similarity=0.445 Sum_probs=10.9
Q ss_pred ceeEEEEEEECCCCE-EEEE
Q 020993 3 DGMFSFVLLDTRDKS-FIAA 21 (319)
Q Consensus 3 ~G~fa~~i~D~~~~~-l~l~ 21 (319)
|=.|.|+|+|..++. ||++
T Consensus 10 drPFlf~I~~~~t~~iLF~G 29 (37)
T 1as4_B 10 NRPFLMIIVPTDTQNIFFMS 29 (37)
T ss_dssp CSCEEEEEEETTSSCCSEEE
T ss_pred cCCEEEEEEeCCCCcEEEEE
Confidence 445777777765543 3443
No 77
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=20.30 E-value=53 Score=27.61 Aligned_cols=41 Identities=10% Similarity=0.029 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCCeEEeecCcccHHHHHHHHHH
Q 020993 92 PLVLRKAFEKAVVKRLMTDVPFGVLLSGGLDSSLVAAVASR 132 (319)
Q Consensus 92 ~~~l~~~l~~av~~rl~~~~~v~v~LSGGlDSs~iaa~~~~ 132 (319)
.+.+.+.+.+.++..+.......+.||||--=..+...+.+
T Consensus 20 ~~~~A~~i~~~i~~~~~~~~~~~l~LsgGstP~~~y~~L~~ 60 (248)
T 3oc6_A 20 VAAAGDRLVDAISSAIGERGQATIVLTGGGTGIGLLKRVRE 60 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEECCCccHHHHHHHHHh
Confidence 34444555555555444456788999999532344444443
No 78
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=20.22 E-value=1.3e+02 Score=23.68 Aligned_cols=59 Identities=15% Similarity=0.326 Sum_probs=32.1
Q ss_pred ccHHH---HHHHHHHhCCcceEEEeChhHHHHHHHHHHHhhccCCcCccCchHHHHHHHHHHHhcCCeEEEeccCccccc
Q 020993 158 PDLKA---AREVADYLGTRHHEFHFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIF 234 (319)
Q Consensus 158 ~e~~~---A~~va~~lg~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~~a~~~g~~v~ltG~G~Delf 234 (319)
.|.+. |..+++.+|+++..--.+.....+.+ .-+.+.++++|++|++.|-|+.--+
T Consensus 14 SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~---------------------~~~~~~a~~~g~~ViIa~AG~aa~L 72 (163)
T 3ors_A 14 SDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMM---------------------VQFASEARERGINIIIAGAGGAAHL 72 (163)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHH---------------------HHHHHHTTTTTCCEEEEEEESSCCH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHH---------------------HHHHHHHHhCCCcEEEEECCchhhh
Confidence 45554 45567889998654333322212221 1223445556777888877776544
Q ss_pred cCc
Q 020993 235 GGY 237 (319)
Q Consensus 235 ~Gy 237 (319)
.|.
T Consensus 73 pgv 75 (163)
T 3ors_A 73 PGM 75 (163)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 79
>3kx6_A Fructose-bisphosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, glycolysis, lyase, STRU genomics; HET: CIT; 2.10A {Babesia bovis}
Probab=20.00 E-value=2e+02 Score=25.77 Aligned_cols=42 Identities=17% Similarity=0.190 Sum_probs=29.6
Q ss_pred cHHHHHHHHHHHHHHHHhhCCCeEEeecCcc---cHHHHHHHHHH
Q 020993 91 DPLVLRKAFEKAVVKRLMTDVPFGVLLSGGL---DSSLVAAVASR 132 (319)
Q Consensus 91 ~~~~l~~~l~~av~~rl~~~~~v~v~LSGGl---DSs~iaa~~~~ 132 (319)
..+++.+.--.++++..+..+|=.++||||. |.|+-+-.+.+
T Consensus 264 s~eeVA~aTv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~ 308 (379)
T 3kx6_A 264 APQTVGFLTSRALRRTVPPALPGVMFLSGGQSESMATRHLNEINK 308 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCTTSCEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhh
Confidence 4567777777777888788888889999997 34444444443
Done!