BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020994
(319 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255576147|ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
gi|223531614|gb|EEF33442.1| zinc finger protein, putative [Ricinus communis]
Length = 456
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/320 (65%), Positives = 249/320 (77%), Gaps = 7/320 (2%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQDEKSCPYYMRTGSCKFGVACKFHHPQP+ LGT LP TG A+ G M SS LPSSGL Y
Sbjct: 140 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPAPLGTGLPFTGPAASGPMASSNLPSSGLPY 199
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
G LPTWSL RAPY+S RLQG Q+YMP ++SPSQG+V A GWNTY+GN+ P+S S+ G
Sbjct: 200 VGGLPTWSLPRAPYVSGPRLQGPQTYMPAVLSPSQGVVAAQGWNTYVGNLSPMSSGSVLG 259
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
S+++Y+SRNQ + G+ Q+H+LS +S NLPERPDQP+CRY+MNTGTCKYG+DCK+HHPKE
Sbjct: 260 SSIVYNSRNQSESGSSGQVHMLSTTSSNLPERPDQPECRYFMNTGTCKYGSDCKYHHPKE 319
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
RIAQ A ++IGP+GLPSRPGQ ICSNYSMYG+CKFGPTCRFDHP+ GYP Y LSL PLS
Sbjct: 320 RIAQLATNSIGPVGLPSRPGQPICSNYSMYGLCKFGPTCRFDHPFTGYPYGYSLSLQPLS 379
Query: 240 ILDSSLMNHQAIS-ATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSS 298
I+DSSL+++ +S S E+ SSK P+WVQN D S +HQN D TK SDD
Sbjct: 380 IIDSSLLSYPRMSPPALSSESPISLSSKFPDWVQNPDGASSKHQNSDR---NTKISDDQP 436
Query: 299 KV--DHPPHSVPNCSEPPHD 316
+ PPHS SEP HD
Sbjct: 437 EQAGSPPPHSSQASSEPSHD 456
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS-NIGPLGLPSRPGQAICS 204
+ LPER QPDC YY+ TGTCKYG+ CK+HHP++R S NI +GLP R + C
Sbjct: 91 EELPERVGQPDCGYYLKTGTCKYGSTCKYHHPRDRNGAGPVSFNI--VGLPMRQDEKSCP 148
Query: 205 NYSMYGICKFGPTCRFDHPYAGYPINYGLSL 235
Y G CKFG C+F HP P+ GL
Sbjct: 149 YYMRTGSCKFGVACKFHHPQPA-PLGTGLPF 178
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
A S P+RP +PDC YY+ TG C YG +C+F+HP +A N LP R GQ
Sbjct: 46 APSSPYPDRPGEPDCVYYLRTGLCGYGNNCRFNHP----PYAAQGNQFKEELPERVGQPD 101
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C Y G CK+G TC++ HP
Sbjct: 102 CGYYLKTGTCKYGSTCKYHHP 122
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY+RTG C +G C+F+HP
Sbjct: 54 RPGEPDCVYYLRTGLCGYGNNCRFNHP 80
>gi|225447159|ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
vinifera]
gi|297739220|emb|CBI28871.3| unnamed protein product [Vitis vinifera]
Length = 450
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/322 (63%), Positives = 249/322 (77%), Gaps = 7/322 (2%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ+EK C YYMRTG CKFG ACKFHHPQP+S GT LP TG A+ GS GSS+LPSSGL Y
Sbjct: 133 MRQEEKPCSYYMRTGLCKFGAACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPY 192
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
G LP WSL RAPY+ R+QG Q+YMP+++SPSQGIVPA GWNTYMGN+ P+S T I G
Sbjct: 193 VGGLPAWSLPRAPYIPGPRMQGPQTYMPIVLSPSQGIVPAQGWNTYMGNMSPISSTGILG 252
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
SNL+Y+SRNQ + G+ Q+H+LS+ +LPERPDQP+CRY+M+TG+CKYG+DCK+HHPKE
Sbjct: 253 SNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKYGSDCKYHHPKE 312
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY-PINYGLSLPPL 238
RIAQ A + +GPLGLP RPGQA+CS+Y++YG+CK+GPTC+FDHP GY NY LSLPPL
Sbjct: 313 RIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKYGPTCKFDHPLTGYSSYNYCLSLPPL 372
Query: 239 SILDSSLMNHQAISAT-HSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDS 297
SILD SL+ +Q S+T HS ETSP SSK P+WVQ +++ S + QNPD K
Sbjct: 373 SILDPSLLPYQRNSSTVHSSETSPSKSSKFPDWVQKTESGSTKSQNPDTKAPEGPPEQAG 432
Query: 298 SKVDHPPHSVPNCSEPPHDQSN 319
S + HS PN SEPP DQS+
Sbjct: 433 SLL----HSSPNSSEPPQDQSD 450
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
LPER QPDC Y++ TGTCKYG+ CK+HHP++R S + +GLP R + CS Y
Sbjct: 85 ELPERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRHGAGPVS-LNIVGLPMRQEEKPCSYY 143
Query: 207 SMYGICKFGPTCRFDHPYAGYPINYGLSLP 236
G+CKFG C+F HP P + G LP
Sbjct: 144 MRTGLCKFGAACKFHHP---QPASAGTVLP 170
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNY 206
P+RP +PDC YY+ TG C YG++C+F+HP E+ AQ LP R GQ C +
Sbjct: 45 PDRPGEPDCIYYLRTGLCGYGSNCRFNHPAYSEQGAQYRGE------LPERVGQPDCGYF 98
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC++ HP
Sbjct: 99 LKTGTCKYGSTCKYHHP 115
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 68/193 (35%), Gaps = 62/193 (32%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E C YY+RTG C +G C+F+HP S G QY
Sbjct: 47 RPGEPDCIYYLRTGLCGYGSNCRFNHPAYSE-----------------------QGAQYR 83
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
G LP Q P G+ G T GS
Sbjct: 84 GELPERVGQ---------------------------PDCGYFLKTG-------TCKYGST 109
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 181
Y + GAG +S + LP R ++ C YYM TG CK+GA CKFHHP+
Sbjct: 110 CKYH-HPRDRHGAGP----VSLNIVGLPMRQEEKPCSYYMRTGLCKFGAACKFHHPQPAS 164
Query: 182 AQSAASNIGPLGL 194
A + GP
Sbjct: 165 AGTVLPATGPAAF 177
>gi|224129058|ref|XP_002320490.1| predicted protein [Populus trichocarpa]
gi|222861263|gb|EEE98805.1| predicted protein [Populus trichocarpa]
Length = 446
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/320 (62%), Positives = 245/320 (76%), Gaps = 12/320 (3%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQDEKSCPYYMRT SCKFGVACKFHHPQP+SLGT+ LTG A+ GS GS ++PSSGL Y
Sbjct: 135 MRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSFSLTGAAAFGSTGSPIVPSSGLPY 194
Query: 61 AGSLPTWSLQRAPYLS-SRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
G LPTWSL RAP +S + LQG Q+YMP++VSPS GI+P PGWNTY+GN+ P+S +SI G
Sbjct: 195 VGGLPTWSLPRAPLMSGTNLQGPQAYMPVVVSPSPGIIPVPGWNTYVGNLNPMSSSSILG 254
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
SN Y SRNQGD G+G Q+H+LS S LPERP QP+CR++M+TGTCKYG+DCK+HHPKE
Sbjct: 255 SNRAYDSRNQGDSGSGGQVHLLSTVSPILPERPGQPECRHFMSTGTCKYGSDCKYHHPKE 314
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
RIAQ A + +G LGLPSRPGQA+C +YSMYGICKFGPTCR+DHP YP NY LSLP LS
Sbjct: 315 RIAQLATNTMGLLGLPSRPGQAVCPDYSMYGICKFGPTCRYDHPIHTYPYNYSLSLPSLS 374
Query: 240 ILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV-QHQNPDMKNSTTKNSDDSS 298
I+DSSL+ + ++ + +P SK+P+ + N D S +HQNPD ++TK SDD +
Sbjct: 375 IMDSSLITYPRMA-----QAAPVTLSKLPDLIHNPDGASYNKHQNPD---TSTKISDDPT 426
Query: 299 KV--DHPPHSVPNCSEPPHD 316
+ PPHS SEP HD
Sbjct: 427 EQAGSPPPHSSQASSEPSHD 446
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 135 GAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL 194
GAQ+ + LPER QPDC YY+ TGTCKYG+ CK+HHP++R S LGL
Sbjct: 81 GAQLR------EELPERVGQPDCGYYLKTGTCKYGSTCKYHHPRDRNGAGPVS-FNALGL 133
Query: 195 PSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P R + C Y CKFG C+F HP
Sbjct: 134 PMRQDEKSCPYYMRTRSCKFGVACKFHHP 162
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
A S P+RP PDC YY+ TG C YG++C+F+HP + LP R GQ
Sbjct: 41 AQSSPYPDRPGAPDCGYYLRTGLCGYGSNCRFNHPVYAALGAQLRE----ELPERVGQPD 96
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C Y G CK+G TC++ HP
Sbjct: 97 CGYYLKTGTCKYGSTCKYHHP 117
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 26/134 (19%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 200
+S ++ LP R D+ C YYM T +CK+G CKFHHP+
Sbjct: 126 VSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQP--------------------A 165
Query: 201 AICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLM---NHQAISATHSI 257
++ +++S+ G FG T P +G P Y LP S+ + LM N Q A +
Sbjct: 166 SLGTSFSLTGAAAFGSTGSPIVPSSGLP--YVGGLPTWSLPRAPLMSGTNLQGPQAYMPV 223
Query: 258 ETSPD-ASSKIPNW 270
SP +P W
Sbjct: 224 VVSPSPGIIPVPGW 237
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
R C YY+RTG C +G C+F+HP ++LG L
Sbjct: 49 RPGAPDCGYYLRTGLCGYGSNCRFNHPVYAALGAQL 84
>gi|224068913|ref|XP_002302855.1| predicted protein [Populus trichocarpa]
gi|222844581|gb|EEE82128.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/321 (61%), Positives = 243/321 (75%), Gaps = 10/321 (3%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQDEKSCPYYMRT SCKFGVACKFHHPQP+SLGT+LPLTG A+ GS GS ++PSSGL Y
Sbjct: 135 MRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSLPLTGAAAFGSTGSPIVPSSGLPY 194
Query: 61 AGSLPTWSLQRAP-YLS-SRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
G LPTWSL RAP Y+S + LQG Q+YMP++VSPSQGIVP PGWNTY+GN P+S +SI
Sbjct: 195 VGGLPTWSLPRAPPYMSGTHLQGPQAYMPVVVSPSQGIVPVPGWNTYVGNSNPMSSSSIL 254
Query: 119 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
GSN Y SRN GD +G+ H+LS + LPERPDQP+CR++M++GTCKYG+DCK+HHPK
Sbjct: 255 GSNRAYDSRNHGD--SGSSGHLLSTAIPALPERPDQPECRHFMSSGTCKYGSDCKYHHPK 312
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPL 238
ERIAQ A + +GP GLP RPGQA+C +YSMYGICKFGPTCR+DHP YP NY LSLP L
Sbjct: 313 ERIAQLATNTMGPFGLPLRPGQAVCPDYSMYGICKFGPTCRYDHPLPTYPYNYSLSLPSL 372
Query: 239 SILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV-QHQNPDMKNSTTKNSDDS 297
S++DSSL+ + ++ +P + SK+P+ ++N D S +HQN D S TK DD
Sbjct: 373 SMMDSSLVTYPRMAQAALSSATPVSLSKLPDLIRNPDGASYNKHQNSD---SNTKTLDDP 429
Query: 298 SK--VDHPPHSVPNCSEPPHD 316
++ PPHS SEP HD
Sbjct: 430 TEHAGSPPPHSSQASSEPSHD 450
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
+ LPER QPDC YY+ TGTCKYG+ CK+HHP++R S LGLP R + C
Sbjct: 86 EELPERIGQPDCGYYIKTGTCKYGSTCKYHHPRDRNGAGPVS-FNALGLPMRQDEKSCPY 144
Query: 206 YSMYGICKFGPTCRFDHPYAGYPINYGLSLP 236
Y CKFG C+F HP P + G SLP
Sbjct: 145 YMRTRSCKFGVACKFHHP---QPASLGTSLP 172
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
A S P+RP PDC YY+ TG C YG++C+++HP I + + + LP R GQ
Sbjct: 41 AQSSPYPDRPGVPDCGYYLRTGLCGYGSNCRYNHP---IYAAQGTQLR-EELPERIGQPD 96
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C Y G CK+G TC++ HP
Sbjct: 97 CGYYIKTGTCKYGSTCKYHHP 117
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK-----ERIAQSAASNIGPLGLP 195
+S ++ LP R D+ C YYM T +CK+G CKFHHP+ + + A+ G G P
Sbjct: 126 VSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSLPLTGAAAFGSTGSP 185
Query: 196 SRPGQAI 202
P +
Sbjct: 186 IVPSSGL 192
>gi|147819907|emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
Length = 460
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/353 (57%), Positives = 249/353 (70%), Gaps = 38/353 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ+EK C YYMRTG CKFG ACKFHHPQP+S GT LP TG A+ GS GSS+LPSSGL Y
Sbjct: 112 MRQEEKPCSYYMRTGLCKFGAACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPY 171
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYM------------- 106
G LP WSL RAPY+ R+QG Q+YMP+++SPSQGIVPA GWNTYM
Sbjct: 172 VGGLPAWSLPRAPYIPGPRMQGPQTYMPIVLSPSQGIVPAQGWNTYMPHFLVLMKSFHVV 231
Query: 107 ------------------GNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL 148
GN+ P+S T I GSNL+Y+SRNQ + G+ Q+H+LS+ +L
Sbjct: 232 NLVYSIDPNEFVICEIPRGNMSPISSTGILGSNLVYNSRNQSESGSSGQVHLLSSLIPHL 291
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PERPDQP+CRY+M+TG+CKYG+DCK+HHPKERIAQ A + +GPLGLP RPGQA+CS+Y++
Sbjct: 292 PERPDQPECRYFMSTGSCKYGSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNL 351
Query: 209 YGICKFGPTCRFDHPYAGY-PINYGLSLPPLSILDSSLMNHQAISAT-HSIETSPDASSK 266
YG+CK+GPTC+FDHP GY NY LSLPPLSILD SL+ +Q S+T HS ETSP SSK
Sbjct: 352 YGLCKYGPTCKFDHPLTGYSSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKSSK 411
Query: 267 IPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSSKVDHPPHSVPNCSEPPHDQSN 319
P+WVQ +++ S + QNPD K S + HS PN SEPP DQS+
Sbjct: 412 FPDWVQKTESGSTKSQNPDTKAPEGPPEQAGSLL----HSSPNSSEPPQDQSD 460
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
LPER QPDC Y++ TGTCKYG+ CK+HHP++R + + +GLP R + CS Y
Sbjct: 64 ELPERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRHG-AGPVXLNIVGLPMRQEEKPCSYY 122
Query: 207 SMYGICKFGPTCRFDHP 223
G+CKFG C+F HP
Sbjct: 123 MRTGLCKFGAACKFHHP 139
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPK--ERIAQSAASNIGPLGLPSRPGQAICSNY 206
P+RP +PDC YY+ TG C YG++C+F+HP E+ AQ LP R GQ C +
Sbjct: 24 PDRPGEPDCIYYLRTGLCGYGSNCRFNHPAYSEQGAQYRGE------LPERVGQPDCGYF 77
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC++ HP
Sbjct: 78 LKTGTCKYGSTCKYHHP 94
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 65/193 (33%), Gaps = 62/193 (32%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E C YY+RTG C +G C+F+HP S G QY
Sbjct: 26 RPGEPDCIYYLRTGLCGYGSNCRFNHPAYSE-----------------------QGAQYR 62
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
G LP Q P G+ G T GS
Sbjct: 63 GELPERVGQ---------------------------PDCGYFLKTG-------TCKYGST 88
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 181
Y ++I+ LP R ++ C YYM TG CK+GA CKFHHP+
Sbjct: 89 CKYHHPRDRHGAGPVXLNIV-----GLPMRQEEKPCSYYMRTGLCKFGAACKFHHPQPAS 143
Query: 182 AQSAASNIGPLGL 194
A + GP
Sbjct: 144 AGTVLPATGPAAF 156
>gi|359488091|ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 3-like [Vitis vinifera]
Length = 324
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 154/248 (62%), Positives = 198/248 (79%), Gaps = 2/248 (0%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ+EK C YYMRTG CKFGVACKFHH QP+S+GT LP+TG+ + GS G S+ PSSGL Y
Sbjct: 71 MRQEEKPCSYYMRTGLCKFGVACKFHHLQPASIGTVLPVTGSVAFGSTGISITPSSGLSY 130
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
G +P W L RAPY+ R+QG Q+YMP+++SPSQGI+PA GWNTYMGN+ P+S TSI G
Sbjct: 131 VGGIPAWLLPRAPYMPGPRMQGPQTYMPIVLSPSQGIIPAQGWNTYMGNMSPISSTSILG 190
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
SNL+Y+++N + + Q+H+LS S +LPER DQP+C Y+M+TG+CKY +DCK+HHPKE
Sbjct: 191 SNLVYNTKNPSESSSNGQVHLLSLSIPHLPERRDQPECXYFMSTGSCKYDSDCKYHHPKE 250
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY-PINYGLSLPPL 238
RIA A + +GPL LPSRPGQA+C +Y++YG+ ++GPTC+FDHP GY NY LSLPPL
Sbjct: 251 RIAXLATNTLGPLDLPSRPGQAVCFHYNLYGLYRYGPTCKFDHPLTGYSSYNYCLSLPPL 310
Query: 239 SILDSSLM 246
SIL+ SL+
Sbjct: 311 SILEPSLL 318
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 209
+R QPDC YY+ T TCKYG+ CK+HH ++R+ S + +GL R + CS Y
Sbjct: 26 KRIGQPDCGYYLKTRTCKYGSICKYHHSRDRLDAGPVS-LNIVGLSMRQEEKPCSYYMRT 84
Query: 210 GICKFGPTCRFDH 222
G+CKFG C+F H
Sbjct: 85 GLCKFGVACKFHH 97
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 126 SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
SR++ D G +S + L R ++ C YYM TG CK+G CKFHH
Sbjct: 53 SRDRLDAGP------VSLNIVGLSMRQEEKPCSYYMRTGLCKFGVACKFHH 97
>gi|356554539|ref|XP_003545603.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Glycine max]
Length = 417
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 165/317 (52%), Positives = 203/317 (64%), Gaps = 30/317 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ+EKSCPYYMRTGSCKFGVACKFHHPQ +SLG A PL G + S+++P+SGL Y
Sbjct: 130 MRQEEKSCPYYMRTGSCKFGVACKFHHPQYASLG-AYPLAGGPPTPT--STIIPTSGLSY 186
Query: 61 AGSLPTWS-LQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
AG P WS + R YLS QG QSY+P + SQG++P WN YMGN+ P P G
Sbjct: 187 AGGFPAWSAVPRMSYLSG--QGLQSYVPPFLPSSQGVIPVQSWNNYMGNMNPAMPNGFLG 244
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
SNL+Y N G+ G Q A + LP RPDQP+CRY+M+TGTCKYG+DCKFHHPKE
Sbjct: 245 SNLVYDYMNLGEPLFGGQ-----AINSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKE 299
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
RI+QS I PLGLP RPGQA+CS Y +YG+CKFGPTC+FDHP P NYGL+ P ++
Sbjct: 300 RISQSL---INPLGLPVRPGQAVCSYYRIYGMCKFGPTCKFDHPVLTIPQNYGLTSPAMN 356
Query: 240 ILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSSK 299
+LD+ L + +S ETSP S N +Q+SDA + D S +
Sbjct: 357 VLDTPLT--RGLSNVQPPETSPSKLSS-DNKLQHSDAKAA-------------TEDSSKQ 400
Query: 300 VDHPPHSVPNCSEPPHD 316
D +S P +EP HD
Sbjct: 401 DDTTSNSFPASAEPLHD 417
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 136 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 195
A + I + + LP+R QPDC Y++ TG CKYG+ CK+HHPK+R +A + LG P
Sbjct: 71 AHISIGTHYGEELPQRAGQPDCEYFLKTGMCKYGSTCKYHHPKDRRG-AAPVSFNTLGFP 129
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP-YA---GYPINYGLSLPPLSILDSSLMNH 248
R + C Y G CKFG C+F HP YA YP+ G P +I+ +S +++
Sbjct: 130 MRQEEKSCPYYMRTGSCKFGVACKFHHPQYASLGAYPLAGGPPTPTSTIIPTSGLSY 186
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 201
+A S P+RP +P+C YY+ TG C YG++C++HHP S ++ G LP R GQ
Sbjct: 35 AAQSTQYPDRPGEPECLYYLRTGACGYGSNCRYHHPAH---ISIGTHYGE-ELPQRAGQP 90
Query: 202 ICSNYSMYGICKFGPTCRFDHP 223
C + G+CK+G TC++ HP
Sbjct: 91 DCEYFLKTGMCKYGSTCKYHHP 112
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 35
R E C YY+RTG+C +G C++HHP S+GT
Sbjct: 44 RPGEPECLYYLRTGACGYGSNCRYHHPAHISIGT 77
>gi|449450892|ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Cucumis sativus]
gi|449515163|ref|XP_004164619.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Cucumis sativus]
Length = 430
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 162/319 (50%), Positives = 213/319 (66%), Gaps = 22/319 (6%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ+EKSCPYY+RTGSCKFGV+CKF+HPQPS +G LP +LGS G+ +PSSG+ Y
Sbjct: 132 MRQEEKSCPYYLRTGSCKFGVSCKFNHPQPSPVGNMLPQARPGALGSGGTPFMPSSGVPY 191
Query: 61 AGSLPTWSLQRAPYLSSR-LQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
P WS+ R Y+ +QG QSY+P++VSPSQG + A WNTY+ N+ P+ P
Sbjct: 192 ----PAWSMPRVQYMPGPCVQGQQSYVPVLVSPSQGAIAAQDWNTYVSNVNPILP----- 242
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
NL Y++ N D + Q+ LS S+ LP+RPDQP+CRY+MN GTCKYG+DCKFHHPK+
Sbjct: 243 -NLGYNNINLEDSYSNGQL-ALSTSTPTLPDRPDQPECRYFMNNGTCKYGSDCKFHHPKQ 300
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
RIAQSA + LGLPSRPGQAICS Y+MYG+CK+GP+C+FDHP YP NYG +LP
Sbjct: 301 RIAQSATNA---LGLPSRPGQAICSYYNMYGLCKYGPSCKFDHPSPTYPYNYGFTLP--- 354
Query: 240 ILDSSLMNHQAISATHSI-ETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSS 298
+LDSS++ + + + T S ET P SK WVQ +D + + + D K ++++
Sbjct: 355 LLDSSIIKYPSNNFTMSSHETLPGTVSKSSEWVQKADPSNNKRRTTDSKVIIDSTGEEAT 414
Query: 299 KVDHPPHSVPNCSEPPHDQ 317
V S+P SE DQ
Sbjct: 415 SVS---CSLPGGSESLQDQ 430
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPLGLPSRPGQAICSNY 206
LPER QPDC Y++ TGTCKYG CK+HHP++R A NI LGLP R + C Y
Sbjct: 85 LPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDRRGAGPVTFNI--LGLPMRQEEKSCPYY 142
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG +C+F+HP
Sbjct: 143 LRTGSCKFGVSCKFNHP 159
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 201
+A S P+RP +PDC YYM TG+C YG++C+F+HP + Q A N LP R GQ
Sbjct: 37 AAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPV-YVGQGALYNG---ELPERIGQP 92
Query: 202 ICSNYSMYGICKFGPTCRFDHP 223
C + G CK+G +C++ HP
Sbjct: 93 DCEYFLKTGTCKYGGSCKYHHP 114
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPK-----ERIAQSAASNIGPLGLPSRPGQAI 202
LP R ++ C YY+ TG+CK+G CKF+HP+ + Q+ +G G P P +
Sbjct: 130 LPMRQEEKSCPYYLRTGSCKFGVSCKFNHPQPSPVGNMLPQARPGALGSGGTPFMPSSGV 189
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YYMRTGSC +G C+F+HP
Sbjct: 46 RPGEPDCLYYMRTGSCSYGSNCRFNHP 72
>gi|356501261|ref|XP_003519444.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform 1 [Glycine max]
gi|356501263|ref|XP_003519445.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform 2 [Glycine max]
Length = 415
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/318 (51%), Positives = 207/318 (65%), Gaps = 34/318 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ+EKSCPYYMRTGSCKFGVACKFHHPQ +SLG A PL G+ + S+++P+SGL Y
Sbjct: 130 MRQEEKSCPYYMRTGSCKFGVACKFHHPQHASLG-AYPLAGSPT---PTSTIIPTSGLPY 185
Query: 61 AGSLPTWS-LQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
AG P WS + R YLS QG QSY+P +S SQG++P WN YMGN+ P P G
Sbjct: 186 AGGFPAWSAVPRMSYLSG--QGLQSYVPPFLSSSQGVIPVQSWNNYMGNMNPAMPNGFLG 243
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
SNL+Y N G+ G Q A + LP RPDQP+CRY+M+TGTCKYG+DCKFHHPKE
Sbjct: 244 SNLVYDYMNLGESLFGGQ-----AINSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKE 298
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
R++QS I PLGLP RPGQA+CS Y +YG+CKFGPTC+FDHP P NYGL+ P ++
Sbjct: 299 RMSQSL---INPLGLPVRPGQAVCSYYRIYGMCKFGPTCKFDHPVLTIPQNYGLTSPAMN 355
Query: 240 ILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSSK 299
+LD+ L + +S ETSP S +Q+SDA + ++DSSK
Sbjct: 356 VLDTPLT--RGLSNVQPPETSPSKLSD--KKLQHSDAKAA--------------TEDSSK 397
Query: 300 VDHPP-HSVPNCSEPPHD 316
D +S P +EP H+
Sbjct: 398 QDDTTLNSFPASAEPLHN 415
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 136 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 195
A + I + + LP+R QPDC Y++ TGTCKYG+ CK+HHPK+R +A + LGLP
Sbjct: 71 AHISIGTHYGEELPQRAGQPDCEYFLKTGTCKYGSTCKYHHPKDRRG-AAPVSFNTLGLP 129
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
R + C Y G CKFG C+F HP
Sbjct: 130 MRQEEKSCPYYMRTGSCKFGVACKFHHP 157
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 201
+A S P+RP +P+C YY+ TG C YG +C++HHP S ++ G LP R GQ
Sbjct: 35 AAQSTQYPDRPGEPECLYYLRTGMCGYGTNCRYHHPAH---ISIGTHYGE-ELPQRAGQP 90
Query: 202 ICSNYSMYGICKFGPTCRFDHP 223
C + G CK+G TC++ HP
Sbjct: 91 DCEYFLKTGTCKYGSTCKYHHP 112
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 35
R E C YY+RTG C +G C++HHP S+GT
Sbjct: 44 RPGEPECLYYLRTGMCGYGTNCRYHHPAHISIGT 77
>gi|357493165|ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355518206|gb|AES99829.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 422
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 153/278 (55%), Positives = 187/278 (67%), Gaps = 19/278 (6%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ-PSSLGTALPLTGNASLGSMGSSVLPSSGLQ 59
MRQ+EKSCPYYMRTGSCKFGVACKFHHPQ +S G A P+ S S+ + SSG
Sbjct: 133 MRQEEKSCPYYMRTGSCKFGVACKFHHPQQAASFGGAYPVAA-----SPPSTTVTSSGFP 187
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
YAG P WS+ R YLS Q QSY+P + SQGI+PA W+ YMG+I P PT G
Sbjct: 188 YAGGFPAWSMPRMSYLSG--QAIQSYVPPFLPSSQGIMPALSWSNYMGSINPAMPTGFIG 245
Query: 120 SNLIYSSRN-QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
SNL+Y N G+ +G Q A + +LP+RP+QPDC+Y+M+TGTCKYG+DCKFHHPK
Sbjct: 246 SNLVYDYMNPAGETLSGGQ-----AMNSSLPDRPEQPDCKYFMSTGTCKYGSDCKFHHPK 300
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPL 238
ERIAQ+ + I PLGLP RPG AICS Y +YG+CKFGPTC+FDHP NYGL P L
Sbjct: 301 ERIAQTLS--INPLGLPMRPGNAICSYYRIYGVCKFGPTCKFDHPVVAISQNYGLPSPTL 358
Query: 239 SILDSSLM-NHQAISATHSIETSPDASSKIPNWVQNSD 275
S+ D+SL+ N + +S ETSP S + +Q SD
Sbjct: 359 SVFDASLLTNPRRLSTVQPAETSPSKQST--DKLQQSD 394
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 136 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 195
A + ++ + LPER QPDC Y++ TGTCKYG+ CK+HHPK+R +A LGLP
Sbjct: 74 ANISPVTQYGEELPERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRG-AAPVVFNTLGLP 132
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
R + C Y G CKFG C+F HP
Sbjct: 133 MRQEEKSCPYYMRTGSCKFGVACKFHHP 160
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 14/80 (17%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-----LPSRPGQAIC 203
P+RP +PDC YY+ TG C YG++C+++HP +NI P+ LP R GQ C
Sbjct: 45 PDRPGEPDCVYYLRTGMCGYGSNCRYNHP---------ANISPVTQYGEELPERVGQPDC 95
Query: 204 SNYSMYGICKFGPTCRFDHP 223
+ G CK+G TC++ HP
Sbjct: 96 EYFLKTGTCKYGSTCKYHHP 115
>gi|295913614|gb|ADG58052.1| transcription factor [Lycoris longituba]
Length = 303
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 120/269 (44%), Positives = 172/269 (63%), Gaps = 26/269 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ+EKSCPYYMRTGSCKFG+ACKF+HPQP++LG++ + G GSSV +
Sbjct: 37 MRQEEKSCPYYMRTGSCKFGIACKFNHPQPATLGSS-------AYGFTGSSVASQLSMPL 89
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIV-SPSQGIVPAP-GWNTYMGNIGPLSPTSI 117
G L W L R PY+ + R+QG +Y+P+I+ PSQG +P GW+TY G++ L T +
Sbjct: 90 MGGLSAWPLAR-PYIPNPRMQGLSTYVPVILPQPSQGAMPMQQGWSTYTGSVSELPSTDV 148
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
G I +++ H S+++ NLPERPDQP+C+YYM TG+CKYG CK+HHP
Sbjct: 149 HGHAQIPNTK--------LHAHSGSSTTINLPERPDQPECQYYMKTGSCKYGTTCKYHHP 200
Query: 178 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPP 237
KER +S + +GPLGLP RPG A+C+ Y+ YG C++G +C++DHP G+ Y ++P
Sbjct: 201 KERYMESPFT-LGPLGLPLRPGHAVCTFYTAYGSCRYGSSCKYDHPLMGF---YNYAVPA 256
Query: 238 LSILDSSLM---NHQAISATHSIETSPDA 263
++ D SL + T++ E + D+
Sbjct: 257 IAAPDPSLFPLNQRNFLQETNNTERNVDS 285
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TGTCK+GA CK+HHP+ER A + LGLP R + C Y G CKFG C+F+
Sbjct: 4 KTGTCKFGATCKYHHPRERYDAPPAP-LNMLGLPMRQEEKSCPYYMRTGSCKFGIACKFN 62
Query: 222 HP 223
HP
Sbjct: 63 HP 64
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
LP R ++ C YYM TG+CK+G CKF+HP+ S+A
Sbjct: 35 LPMRQEEKSCPYYMRTGSCKFGIACKFNHPQPATLGSSA 73
>gi|148907602|gb|ABR16930.1| unknown [Picea sitchensis]
Length = 554
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 149/252 (59%), Gaps = 26/252 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MR EK C YY+RTG CK+G +CK+ HPQP++LGT +P++G+ ++ + P+S QY
Sbjct: 164 MRMGEKECTYYIRTGYCKYGASCKYDHPQPAALGTLVPVSGSPLYATIRPPIAPASATQY 223
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTS-- 116
+ LPTW R PY S + G YMP++ SP QG++ A GW TY PL SP S
Sbjct: 224 SPGLPTWPSPRTPYRQSPHMPGALPYMPVMYSPHQGMLAASGWGTYQSPASPLTSPESQQ 283
Query: 117 -IAGSNLIYSSRNQGDLGAGAQMHILS---------------------ASSQNLPERPDQ 154
+ N++Y+S L G +++ ++ PERP Q
Sbjct: 284 QLRRMNIMYNSTQPNGLSVGGVQGLITPFAQGSSAAVGHQPGHFQPNRTQTETYPERPGQ 343
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 214
P+C+YY+ TG CK+G C++HHP ER++QS+ + P+GLP RP Q C+ YS YGICKF
Sbjct: 344 PECQYYIKTGDCKFGFACRYHHPHERVSQSSTCVLSPIGLPLRPTQPTCTYYSHYGICKF 403
Query: 215 GPTCRFDHPYAG 226
GPTC+FDHP AG
Sbjct: 404 GPTCKFDHPMAG 415
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
LPER C++YM TGTCK+GA CK+HHP++R+ + + +GLP R G+ C+ Y
Sbjct: 116 ELPERVGHNACQFYMKTGTCKFGATCKYHHPRDRLG-AGQVQLNMIGLPMRMGEKECTYY 174
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G +C++DHP
Sbjct: 175 IRTGYCKYGASCKYDHP 191
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 200
++ S++ PER Q DC +YM TG C YG +C+F+HP Q AA N G LP R G
Sbjct: 67 MNGYSESYPERFGQADCSHYMRTGYCGYGMNCRFNHPTNMKLQ-AARNKGE--LPERVGH 123
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C Y G CKFG TC++ HP
Sbjct: 124 NACQFYMKTGTCKFGATCKYHHP 146
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 6/48 (12%)
Query: 132 LGAG-AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
LGAG Q++++ LP R + +C YY+ TG CKYGA CK+ HP+
Sbjct: 150 LGAGQVQLNMI-----GLPMRMGEKECTYYIRTGYCKYGASCKYDHPQ 192
>gi|148907689|gb|ABR16973.1| unknown [Picea sitchensis]
Length = 504
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/253 (47%), Positives = 146/253 (57%), Gaps = 30/253 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ EK CPYYMRTGSCK+GV CKFHH P++L LP +G+ + S+ P+SG Y
Sbjct: 177 MRQGEKECPYYMRTGSCKYGVTCKFHHSDPTAL---LPDSGSPVYAAAELSLSPASGSTY 233
Query: 61 AGSLPTWSLQRAPYLSSR-LQGTQSYMPLIVSPSQGIVPA-PGWNTYMGNIGPLSP---T 115
L +WSLQRAPY+S LQG+ +YMP+I+SP Q PGW+TY G I PLS
Sbjct: 234 PAGLASWSLQRAPYVSGPCLQGSPTYMPVILSPQQSTPSVQPGWSTYHGPISPLSSPEGK 293
Query: 116 SIAGSNLIYSSRN------------------QGDLGA----GAQMHILSASSQNLPERPD 153
G+ +YSS QG A G Q + + + PERPD
Sbjct: 294 RQLGTGTVYSSSYMTGSSSSRHMRGALSPPVQGSSTAMEHPGVQSQVAAPQREAFPERPD 353
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
QP C++YM TG CKYG C++HHPKER+A S GLP RPGQ C YS YGICK
Sbjct: 354 QPQCQHYMKTGCCKYGTTCRYHHPKERVALSPWCMFSSQGLPLRPGQPTCPFYSRYGICK 413
Query: 214 FGPTCRFDHPYAG 226
FGP C+FDH G
Sbjct: 414 FGPICKFDHSLTG 426
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
LPER QP+C+++M TG CKYGA CK+HHP++R N LGLP R G+ C Y
Sbjct: 130 ELPERFGQPECKHFMKTGVCKYGATCKYHHPRDRDGSKVQLNY--LGLPMRQGEKECPYY 187
Query: 207 SMYGICKFGPTCRFDH 222
G CK+G TC+F H
Sbjct: 188 MRTGSCKYGVTCKFHH 203
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 66/145 (45%), Gaps = 21/145 (14%)
Query: 138 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLP 195
+ + SS PERP + DC YYM TG C YG +C F+HP +R AQ LP
Sbjct: 79 LEEIGTSSGPYPERPGEQDCAYYMRTGLCGYGMNCHFNHPPNVKRAAQYMNE------LP 132
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP-----------YAGYPINYGLSLPPLSILDSS 244
R GQ C ++ G+CK+G TC++ HP Y G P+ G P + S
Sbjct: 133 ERFGQPECKHFMKTGVCKYGATCKYHHPRDRDGSKVQLNYLGLPMRQGEKECPYYMRTGS 192
Query: 245 LMNHQAISATHSIETS--PDASSKI 267
HS T+ PD+ S +
Sbjct: 193 CKYGVTCKFHHSDPTALLPDSGSPV 217
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E+ C YYMRTG C +G+ C F+HP
Sbjct: 92 RPGEQDCAYYMRTGLCGYGMNCHFNHP 118
>gi|7211990|gb|AAF40461.1|AC004809_19 Contains similarity to zinc finger protein from Arabidopsis
thaliana gb|AC018363. EST gb|AA713271 comes from this
gene [Arabidopsis thaliana]
Length = 396
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/304 (42%), Positives = 166/304 (54%), Gaps = 48/304 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MR EK CPYY+RTG+C+FGVACKFHHPQP N + G S P++ L+Y
Sbjct: 126 MRLGEKPCPYYLRTGTCRFGVACKFHHPQPD----------NGHSTAYGMSSFPAADLRY 175
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
A L S R Q QSY+P++VSPSQG +P GW YM A S
Sbjct: 176 ASGLTMMSTYGT---LPRPQVPQSYVPILVSPSQGFLPPQGWAPYM-----------AAS 221
Query: 121 NLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
N +Y+ +NQ G+ A M + A ++ L E DQP+CR++MNTGTCKYG DCK+ HP
Sbjct: 222 NSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGV 281
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP-INYGLSLPPL 238
RI+Q S I P LP+RPGQ C N+ YG CKFGP C+FDHP YP + SLP
Sbjct: 282 RISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLP-- 339
Query: 239 SILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSS 298
+ S + HQ IS T PN SD+ S+ + PD+K K S ++
Sbjct: 340 TPFASPVTTHQRISPT-------------PN---RSDSKSLSNGKPDVK----KESSETE 379
Query: 299 KVDH 302
K D+
Sbjct: 380 KPDN 383
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPLGLPSRPGQAICS 204
+ LPER QPDC TG CKYG CK+HHPK+R AQ N+ +GLP R G+ C
Sbjct: 81 EELPERIGQPDCE----TGACKYGPTCKYHHPKDRNGAQPVMFNV--IGLPMRLGEKPCP 134
Query: 205 NYSMYGICKFGPTCRFDHPYA--GYPINYGLSLPPLSIL 241
Y G C+FG C+F HP G+ YG+S P + L
Sbjct: 135 YYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADL 173
>gi|18390466|ref|NP_563725.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
gi|42571337|ref|NP_973759.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
gi|62901489|sp|Q94AD9.1|C3H3_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 3;
Short=AtC3H3; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 4
gi|15081721|gb|AAK82515.1| At1g04990/F13M7_1 [Arabidopsis thaliana]
gi|21360515|gb|AAM47373.1| At1g04990/F13M7_1 [Arabidopsis thaliana]
gi|225897880|dbj|BAH30272.1| hypothetical protein [Arabidopsis thaliana]
gi|332189654|gb|AEE27775.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
gi|332189655|gb|AEE27776.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
Length = 404
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/304 (42%), Positives = 166/304 (54%), Gaps = 48/304 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MR EK CPYY+RTG+C+FGVACKFHHPQP N + G S P++ L+Y
Sbjct: 134 MRLGEKPCPYYLRTGTCRFGVACKFHHPQPD----------NGHSTAYGMSSFPAADLRY 183
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
A L S R Q QSY+P++VSPSQG +P GW YM A S
Sbjct: 184 ASGLTMMSTYGT---LPRPQVPQSYVPILVSPSQGFLPPQGWAPYM-----------AAS 229
Query: 121 NLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
N +Y+ +NQ G+ A M + A ++ L E DQP+CR++MNTGTCKYG DCK+ HP
Sbjct: 230 NSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGV 289
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP-INYGLSLPPL 238
RI+Q S I P LP+RPGQ C N+ YG CKFGP C+FDHP YP + SLP
Sbjct: 290 RISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLP-- 347
Query: 239 SILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSS 298
+ S + HQ IS T PN SD+ S+ + PD+K K S ++
Sbjct: 348 TPFASPVTTHQRISPT-------------PN---RSDSKSLSNGKPDVK----KESSETE 387
Query: 299 KVDH 302
K D+
Sbjct: 388 KPDN 391
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPLGLPSRPGQAICS 204
+ LPER QPDC Y++ TG CKYG CK+HHPK+R AQ N+ +GLP R G+ C
Sbjct: 85 EELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNV--IGLPMRLGEKPCP 142
Query: 205 NYSMYGICKFGPTCRFDHPYA--GYPINYGLSLPPLSIL 241
Y G C+FG C+F HP G+ YG+S P + L
Sbjct: 143 YYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADL 181
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 111 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL---PERPDQPDCRYYMNTGTCK 167
P+S T S+L+ + A +M + + L P+RP + DC++Y+ TG C
Sbjct: 4 PMSDTQHVQSSLVSIRSSDKIEDAFRKMKVNETGVEELNPYPDRPGERDCQFYLRTGLCG 63
Query: 168 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
YG+ C+++HP + Q A LP R GQ C + G CK+GPTC++ HP
Sbjct: 64 YGSSCRYNHPTH-LPQDVAYYKE--ELPERIGQPDCEYFLKTGACKYGPTCKYHHP 116
>gi|255644834|gb|ACU22918.1| unknown [Glycine max]
Length = 264
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/250 (46%), Positives = 153/250 (61%), Gaps = 30/250 (12%)
Query: 68 SLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSR 127
S + ++ +RLQ SY+P +S SQG++P WN YMGN+ P P GSNL+Y
Sbjct: 44 STKNVVFIWTRLQ---SYVPPFLSSSQGVIPVQSWNNYMGNMNPAMPNGFLGSNLVYDYM 100
Query: 128 NQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS 187
N G+ G Q A + LP RPDQP+CRY+M+TGTCKYG+DCKFHHPKER++QS
Sbjct: 101 NLGESLFGGQ-----AINSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKERMSQSL-- 153
Query: 188 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMN 247
I PLGLP RPGQA+CS Y +YG+CKFGPTC+FDHP P NYGL+ P +++LD+ L
Sbjct: 154 -INPLGLPVRPGQAVCSYYRIYGMCKFGPTCKFDHPVLTIPQNYGLTSPAMNVLDTPLT- 211
Query: 248 HQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSSKVDHPP-HS 306
+ +S ETSP S +Q+SDA + ++DSSK D +S
Sbjct: 212 -RGLSNVQPPETSPSKLSDKK--LQHSDAKAA--------------TEDSSKQDDTTLNS 254
Query: 307 VPNCSEPPHD 316
P +EP H+
Sbjct: 255 FPASAEPLHN 264
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R D+ C Y+M TG+CK+G CKFHHP+
Sbjct: 119 RPDQPECRYFMSTGTCKYGSDCKFHHPK 146
>gi|297848754|ref|XP_002892258.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338100|gb|EFH68517.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 411
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 166/303 (54%), Gaps = 48/303 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ EK CPYY+RTG+C+FGVACKFHHPQP N + G S PS+GLQY
Sbjct: 134 MRQGEKPCPYYLRTGTCRFGVACKFHHPQPD----------NGHSTAYGMSSFPSAGLQY 183
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
A L S R Q QSY+P++VSPSQG++P GW YM S
Sbjct: 184 ASGLTMMSTYGT---LPRPQVPQSYVPIMVSPSQGLLPPQGWAPYM-----------PAS 229
Query: 121 NLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
N +Y+ +NQ G+ A M + A ++ L E +QP+CR++MNTGTCKYG DCK++HP
Sbjct: 230 NSMYNVKNQPYYSGSSAPMAMAVALNRGLSESSEQPECRFFMNTGTCKYGDDCKYNHPGV 289
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP-INYGLSLPPL 238
RI+Q + I P LP+RPGQ C N+ YG CKFG C+FDHP Y + SLP
Sbjct: 290 RISQPPPNLINPFVLPARPGQPACGNFRSYGFCKFGRNCKFDHPMLPYQGLTMASSLP-- 347
Query: 239 SILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSS 298
+ S + HQ IS + PN SD+ S+ + PD+K K S ++
Sbjct: 348 TPYASPVSTHQRISPS-------------PN---RSDSKSLSNGKPDVK----KESSETE 387
Query: 299 KVD 301
K D
Sbjct: 388 KAD 390
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPLGLPSRPGQAICS 204
+ LPER QPDC Y++ TG CKYG+ CK+HHPK+R AQ N+ +GLP R G+ C
Sbjct: 85 EELPERIGQPDCEYFLKTGACKYGSTCKYHHPKDRNGAQPVMFNV--IGLPMRQGEKPCP 142
Query: 205 NYSMYGICKFGPTCRFDHPYA--GYPINYGLS 234
Y G C+FG C+F HP G+ YG+S
Sbjct: 143 YYLRTGTCRFGVACKFHHPQPDNGHSTAYGMS 174
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
P+RP + DC++Y+ TG C YG+ C+++HP + Q A + LP R GQ C +
Sbjct: 45 PDRPGERDCQFYLRTGLCGYGSSCRYNHPAH-LPQDVAYHKE--ELPERIGQPDCEYFLK 101
Query: 209 YGICKFGPTCRFDHP 223
G CK+G TC++ HP
Sbjct: 102 TGACKYGSTCKYHHP 116
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E+ C +Y+RTG C +G +C+++HP
Sbjct: 47 RPGERDCQFYLRTGLCGYGSSCRYNHP 73
>gi|122207693|sp|Q2R4J4.2|C3H63_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 63;
Short=OsC3H63
gi|108864370|gb|ABA93650.2| Zinc finger CCCH type domain containing protein ZFN, putative,
expressed [Oryza sativa Japonica Group]
Length = 444
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 165/298 (55%), Gaps = 30/298 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKFG CKFHHPQPS+ A+ S+ S G SV S Y
Sbjct: 146 LRPNEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAV----RGSVYSPGQSVTSPSQHTY 201
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP---- 114
G++ W L R A +++S R G SY +IV P G+V PGWN Y IG S
Sbjct: 202 PGAVTNWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWNPYAAQIGSSSSDDQQ 259
Query: 115 TSIAGSNLIYSSR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYM 161
+ G+ SR N GD G AG+ + + + +++ PERPDQP+C++YM
Sbjct: 260 RTAGGAQYYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYM 319
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA CKFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FD
Sbjct: 320 KTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFD 379
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 279
HP + YGL+ P D S A HS E SPD S + +SD+ +
Sbjct: 380 HPMGT--VMYGLATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 432
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 134 AGAQMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 192
A +M + +A + P+R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + L
Sbjct: 83 ADRKMAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNAL 142
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P RP + C+ Y G CKFG TC+F HP
Sbjct: 143 GYPLRPNEKECAYYLRTGQCKFGSTCKFHHP 173
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 131 DLGAGAQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASN 188
D A QM++ A PER +PDC YYM TG C++G CKF+HP +R +A +AA
Sbjct: 35 DEEAMWQMNLGEAMEAGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARM 94
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFG TC+F HP
Sbjct: 95 KGE--YPQRIGQPECQYYLKTGTCKFGATCKFHHP 127
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + + Q++ L P RP++ +C YY+ TG CK+G+ CKFHHP Q +
Sbjct: 128 REKAAIATRVQLNAL-----GYPLRPNEKECAYYLRTGQCKFGSTCKFHHP-----QPSN 177
Query: 187 SNIGPLGLPSRPGQAICS 204
+ + G PGQ++ S
Sbjct: 178 TMVAVRGSVYSPGQSVTS 195
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP + A
Sbjct: 56 RIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVA 90
>gi|108864369|gb|ABG22481.1| Zinc finger CCCH type domain containing protein ZFN, putative,
expressed [Oryza sativa Japonica Group]
gi|218185712|gb|EEC68139.1| hypothetical protein OsI_36059 [Oryza sativa Indica Group]
Length = 406
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 165/298 (55%), Gaps = 30/298 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKFG CKFHHPQPS+ A+ S+ S G SV S Y
Sbjct: 108 LRPNEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAV----RGSVYSPGQSVTSPSQHTY 163
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP---- 114
G++ W L R A +++S R G SY +IV P G+V PGWN Y IG S
Sbjct: 164 PGAVTNWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWNPYAAQIGSSSSDDQQ 221
Query: 115 TSIAGSNLIYSSR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYM 161
+ G+ SR N GD G AG+ + + + +++ PERPDQP+C++YM
Sbjct: 222 RTAGGAQYYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYM 281
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA CKFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FD
Sbjct: 282 KTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFD 341
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 279
HP + YGL+ P D S A HS E SPD S + +SD+ +
Sbjct: 342 HPMG--TVMYGLATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 394
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 134 AGAQMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 192
A +M + +A + P+R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + L
Sbjct: 45 ADRKMAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNAL 104
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P RP + C+ Y G CKFG TC+F HP
Sbjct: 105 GYPLRPNEKECAYYLRTGQCKFGSTCKFHHP 135
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PER +PDC YYM TG C++G CKF+HP +R +A +AA G P R GQ C Y
Sbjct: 16 PERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKGE--YPQRIGQPECQYYL 73
Query: 208 MYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 74 KTGTCKFGATCKFHHP 89
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + + Q++ L P RP++ +C YY+ TG CK+G+ CKFHHP Q +
Sbjct: 90 REKAAIATRVQLNAL-----GYPLRPNEKECAYYLRTGQCKFGSTCKFHHP-----QPSN 139
Query: 187 SNIGPLGLPSRPGQAICS 204
+ + G PGQ++ S
Sbjct: 140 TMVAVRGSVYSPGQSVTS 157
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP + A
Sbjct: 18 RIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVA 52
>gi|222615948|gb|EEE52080.1| hypothetical protein OsJ_33853 [Oryza sativa Japonica Group]
Length = 529
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 165/298 (55%), Gaps = 30/298 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKFG CKFHHPQPS+ A+ S+ S G SV S Y
Sbjct: 231 LRPNEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAV----RGSVYSPGQSVTSPSQHTY 286
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP---- 114
G++ W L R A +++S R G SY +IV P G+V PGWN Y IG S
Sbjct: 287 PGAVTNWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWNPYAAQIGSSSSDDQQ 344
Query: 115 TSIAGSNLIYSSR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYM 161
+ G+ SR N GD G AG+ + + + +++ PERPDQP+C++YM
Sbjct: 345 RTAGGAQYYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYM 404
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA CKFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FD
Sbjct: 405 KTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFD 464
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 279
HP + YGL+ P D S A HS E SPD S + +SD+ +
Sbjct: 465 HPMG--TVMYGLATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 517
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 134 AGAQMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 192
A +M + +A + P+R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + L
Sbjct: 168 ADRKMAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNAL 227
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P RP + C+ Y G CKFG TC+F HP
Sbjct: 228 GYPLRPNEKECAYYLRTGQCKFGSTCKFHHP 258
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 131 DLGAGAQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASN 188
D A QM++ A PER +PDC YYM TG C++G CKF+HP +R +A +AA
Sbjct: 120 DEEAMWQMNLGEAMEAGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARM 179
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFG TC+F HP
Sbjct: 180 KGE--YPQRIGQPECQYYLKTGTCKFGATCKFHHP 212
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + + Q++ L P RP++ +C YY+ TG CK+G+ CKFHHP Q +
Sbjct: 213 REKAAIATRVQLNAL-----GYPLRPNEKECAYYLRTGQCKFGSTCKFHHP-----QPSN 262
Query: 187 SNIGPLGLPSRPGQAICS 204
+ + G PGQ++ S
Sbjct: 263 TMVAVRGSVYSPGQSVTS 280
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP + A
Sbjct: 141 RIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVA 175
>gi|115485469|ref|NP_001067878.1| Os11g0472000 [Oryza sativa Japonica Group]
gi|113645100|dbj|BAF28241.1| Os11g0472000, partial [Oryza sativa Japonica Group]
Length = 414
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/298 (42%), Positives = 165/298 (55%), Gaps = 30/298 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKFG CKFHHPQPS+ A+ S+ S G SV S Y
Sbjct: 116 LRPNEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAV----RGSVYSPGQSVTSPSQHTY 171
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS----P 114
G++ W L R A +++S R G SY +IV P G+V PGWN Y IG S
Sbjct: 172 PGAVTNWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWNPYAAQIGSSSSDDQQ 229
Query: 115 TSIAGSNLIYSSR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYM 161
+ G+ SR N GD G AG+ + + + +++ PERPDQP+C++YM
Sbjct: 230 RTAGGAQYYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYM 289
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA CKFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FD
Sbjct: 290 KTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFD 349
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 279
HP + YGL+ P D S A HS E SPD S + +SD+ +
Sbjct: 350 HPMG--TVMYGLATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 402
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 134 AGAQMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 192
A +M + +A + P+R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + L
Sbjct: 53 ADRKMAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNAL 112
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P RP + C+ Y G CKFG TC+F HP
Sbjct: 113 GYPLRPNEKECAYYLRTGQCKFGSTCKFHHP 143
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PER +PDC YYM TG C++G CKF+HP +R +A +AA G P R GQ C Y
Sbjct: 24 PERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKGE--YPQRIGQPECQYYL 81
Query: 208 MYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 82 KTGTCKFGATCKFHHP 97
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + + Q++ L P RP++ +C YY+ TG CK+G+ CKFHHP Q +
Sbjct: 98 REKAAIATRVQLNAL-----GYPLRPNEKECAYYLRTGQCKFGSTCKFHHP-----QPSN 147
Query: 187 SNIGPLGLPSRPGQAICS 204
+ + G PGQ++ S
Sbjct: 148 TMVAVRGSVYSPGQSVTS 165
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP + A
Sbjct: 26 RIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVA 60
>gi|147842162|emb|CAN71488.1| hypothetical protein VITISV_005339 [Vitis vinifera]
Length = 232
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 120/156 (76%), Gaps = 1/156 (0%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAG 62
++EK C YYMRTG CKFG CKFHH QP+S+GT LP+T A+ GS G S+ PSSGL Y G
Sbjct: 77 KEEKPCSYYMRTGLCKFGATCKFHHLQPASIGTVLPITSPAAFGSTGVSITPSSGLPYVG 136
Query: 63 SLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
+P WSL RAP + +QG Q+YMP+I S SQGIVPA GWNTYMGN+ P+S TSI GSN
Sbjct: 137 GIPAWSLPRAPCMPGPHMQGPQTYMPIIFSSSQGIVPAQGWNTYMGNMSPISSTSILGSN 196
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDC 157
L+Y+++NQG+ G+G Q+H+LS+S LP+R DQP+C
Sbjct: 197 LVYNTKNQGESGSGGQVHLLSSSIPYLPKRRDQPEC 232
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 126 SRNQGDLGAGAQMHIL--SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
SR Q D +M I + N E+P C YYM TG CK+GA CKFHH
Sbjct: 53 SRKQVDADGLTRMQIRLPTTVEVNKEEKP----CSYYMRTGLCKFGATCKFHH 101
>gi|242070873|ref|XP_002450713.1| hypothetical protein SORBIDRAFT_05g013190 [Sorghum bicolor]
gi|241936556|gb|EES09701.1| hypothetical protein SORBIDRAFT_05g013190 [Sorghum bicolor]
Length = 446
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 172/313 (54%), Gaps = 33/313 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKFG CKFHHPQPS++ A+ S+ S G S Y
Sbjct: 147 LRANEKECAYYLRTGQCKFGSTCKFHHPQPSTMMVAV----RGSVYSPGQSATSPGQHAY 202
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP---T 115
G++ +W L R A +++S R G SY +IV P G+V PGW+ Y IG S
Sbjct: 203 QGAVTSWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYTAQIGSSSSDDQQ 260
Query: 116 SIAGSNLIYS-SRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYM 161
G+ Y+ SR G G G Q + + + +N+ PERPDQP+C++YM
Sbjct: 261 RTPGAAQYYTGSRQSGTAGIGDQGMFSSYQAGSVPVGLYAVQRENVFPERPDQPECQFYM 320
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+FD
Sbjct: 321 KTGDCKFGAVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKFD 380
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQH 281
HP YG + P S +SL A +H E SPD+ S + +SD+
Sbjct: 381 HPMGS--AMYGHASSPTSEAPTSL-RMLAHVPSHP-EVSPDSGSGRSRRIAHSDS----Q 432
Query: 282 QNPDMKNSTTKNS 294
Q P ++ ST + +
Sbjct: 433 QIPSVERSTEREA 445
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
P+R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + LG P R + C+ Y
Sbjct: 98 EYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLNELGYPLRANEKECAYY 157
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 158 LRTGQCKFGSTCKFHHP 174
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PER +PDC YYM TG C++G CKF+HP +R +A +AA G P R GQ C Y
Sbjct: 55 PERVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAVAAARMKGE--YPQRIGQPECQYYL 112
Query: 208 MYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 113 KTGTCKFGATCKFHHP 128
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
R + + Q++ L P R ++ +C YY+ TG CK+G+ CKFHHP+
Sbjct: 129 REKAAMATRVQLNEL-----GYPLRANEKECAYYLRTGQCKFGSTCKFHHPQ 175
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP L A
Sbjct: 57 RVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAVA 91
>gi|124359159|gb|ABD28369.2| Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago
truncatula]
Length = 428
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 153/255 (60%), Gaps = 26/255 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ- 59
+R +E C YY+RTG CKFG CKFHHPQPS++ LP+ G+ ++ S ++G Q
Sbjct: 130 LRPNESECAYYLRTGQCKFGNTCKFHHPQPSNM--VLPMRGSPVYPTVQSPT--TAGQQS 185
Query: 60 YAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
YA + WS + Y+ S R QG SY PLI+ QG+V PGW+TY G +G SP
Sbjct: 186 YAAGITNWST--SSYIPSPRWQGPSSYAPLILP--QGVVSVPGWSTYNGQMGSDSPQQTM 241
Query: 119 GSNLIYSSRNQGD-LGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTG 164
++ Y + +QGD AG Q + + +N+ PERPDQP+C++YM TG
Sbjct: 242 RNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTG 301
Query: 165 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
CK+GA C+FHHP+ER + + PLGLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 302 DCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 361
Query: 225 AGYPINYGLSLPPLS 239
+ Y +S PL+
Sbjct: 362 GIF--TYNVSASPLA 374
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 10/87 (11%)
Query: 147 NLPERPDQPDCR----------YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 196
PER QP+C+ YY+ TGTCK+GA C+FHHPK++ + + LG P
Sbjct: 71 EFPERLGQPECQASVNECCIMHYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPL 130
Query: 197 RPGQAICSNYSMYGICKFGPTCRFDHP 223
RP ++ C+ Y G CKFG TC+F HP
Sbjct: 131 RPNESECAYYLRTGQCKFGNTCKFHHP 157
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 46/86 (53%), Gaps = 13/86 (15%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSN-- 205
PE P +PDC YY+ TG C++GA C+F+HP R +A + A G P R GQ C
Sbjct: 28 PEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGE--FPERLGQPECQASV 85
Query: 206 --------YSMYGICKFGPTCRFDHP 223
Y G CKFG TCRF HP
Sbjct: 86 NECCIMHYYLKTGTCKFGATCRFHHP 111
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
P RP++ +C YY+ TG CK+G CKFHHP+
Sbjct: 129 PLRPNESECAYYLRTGQCKFGNTCKFHHPQ 158
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
E C YY+RTG C+FG C+F+HP L A
Sbjct: 33 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 64
>gi|357507737|ref|XP_003624157.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355499172|gb|AES80375.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 418
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 153/255 (60%), Gaps = 26/255 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ- 59
+R +E C YY+RTG CKFG CKFHHPQPS++ LP+ G+ ++ S ++G Q
Sbjct: 120 LRPNESECAYYLRTGQCKFGNTCKFHHPQPSNM--VLPMRGSPVYPTVQSPT--TAGQQS 175
Query: 60 YAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
YA + WS + Y+ S R QG SY PLI+ QG+V PGW+TY G +G SP
Sbjct: 176 YAAGITNWST--SSYIPSPRWQGPSSYAPLILP--QGVVSVPGWSTYNGQMGSDSPQQTM 231
Query: 119 GSNLIYSSRNQGD-LGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTG 164
++ Y + +QGD AG Q + + +N+ PERPDQP+C++YM TG
Sbjct: 232 RNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTG 291
Query: 165 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
CK+GA C+FHHP+ER + + PLGLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 292 DCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 351
Query: 225 AGYPINYGLSLPPLS 239
+ Y +S PL+
Sbjct: 352 GIF--TYNVSASPLA 364
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+GA C+FHHPK++ + + LG P RP ++ C+ Y
Sbjct: 71 EFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESECAYY 130
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 131 LRTGQCKFGNTCKFHHP 147
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PE P +PDC YY+ TG C++GA C+F+HP R +A + A G P R GQ C Y
Sbjct: 28 PEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGE--FPERLGQPECQYYL 85
Query: 208 MYGICKFGPTCRFDHP 223
G CKFG TCRF HP
Sbjct: 86 KTGTCKFGATCRFHHP 101
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
P RP++ +C YY+ TG CK+G CKFHHP+
Sbjct: 119 PLRPNESECAYYLRTGQCKFGNTCKFHHPQ 148
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
E C YY+RTG C+FG C+F+HP L A
Sbjct: 33 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 64
>gi|224285149|gb|ACN40302.1| unknown [Picea sitchensis]
Length = 468
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 120/282 (42%), Positives = 162/282 (57%), Gaps = 38/282 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ- 59
+R +EK C YYMRTG CK+G CKFHHPQP S T +P+ G++ + S P G Q
Sbjct: 153 LRPNEKECAYYMRTGQCKYGATCKFHHPQPVS--TLVPVRGSSLFTPVHSPTTP--GPQP 208
Query: 60 YAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYM-GNIGPLSPT-- 115
Y GSLPTW +QRAP++ S R QG SY PLI+ QGI+P P W+TY G +G +S +
Sbjct: 209 YPGSLPTWPMQRAPFIQSPRWQGPSSYAPLILP--QGIMPVPSWSTYPPGQVGSISSSDG 266
Query: 116 --SIAGSNLIYSSRNQGD-LGAGAQ-----------------MHILSASSQN---LPERP 152
G+ L+Y +Q D + +G Q + + S+S+Q PERP
Sbjct: 267 QQQAMGAGLVYGPSSQTDPMASGIQGTLSHFPPGSPGMGPPTLQLPSSSAQRESMFPERP 326
Query: 153 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 212
Q +C++YM TG CK+G C++HHPKERI + LGLP RPG C+ ++ YGIC
Sbjct: 327 GQQECQFYMKTGDCKFGMTCRYHHPKERIIPVPNCVLNSLGLPLRPGAPACTFFTRYGIC 386
Query: 213 KFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISAT 254
KFG TC+FDHP + +S P +D S+ HQ SA+
Sbjct: 387 KFGATCKFDHPMGHSSYSQSISSP----IDISVGRHQIGSAS 424
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TG+CK+GA CKFHHP+++ + + I G P RP + C+ Y
Sbjct: 104 EYPERLGQPECQYYLKTGSCKFGATCKFHHPRDKAGSTGRAVINVYGYPLRPNEKECAYY 163
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC+F HP
Sbjct: 164 MRTGQCKYGATCKFHHP 180
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 137 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPLGLP 195
Q + A PERP +PDC YYM TG C +G C+F+HP R A +AA N G P
Sbjct: 49 QHENMEAEVGPFPERPGEPDCTYYMRTGLCGFGMSCRFNHPPNRKQAAAAARNKGE--YP 106
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
R GQ C Y G CKFG TC+F HP
Sbjct: 107 ERLGQPECQYYLKTGSCKFGATCKFHHP 134
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPK---ERIAQSAASNIGPLGLPSRPG 199
P RP++ +C YYM TG CKYGA CKFHHP+ + +S P+ P+ PG
Sbjct: 152 PLRPNEKECAYYMRTGQCKYGATCKFHHPQPVSTLVPVRGSSLFTPVHSPTTPG 205
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YYMRTG C FG++C+F+HP
Sbjct: 63 RPGEPDCTYYMRTGLCGFGMSCRFNHP 89
>gi|359476779|ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Vitis vinifera]
Length = 441
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 144/247 (58%), Gaps = 22/247 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R DE C YY+RTG CKFG CKFHHPQPSS+ + L G+ S+ S P Y
Sbjct: 138 LRPDEIDCAYYLRTGQCKFGSTCKFHHPQPSSM--MVSLRGSPVYPSVPSPTTPGQ-QSY 194
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS--I 117
AG + W L RA ++ S R Q SY PL++ QG+V PGWN Y G +G S +
Sbjct: 195 AGGITNWPLSRASFIPSPRWQAPSSYAPLMLP--QGVVSVPGWNAYSGQLGSPSESQQQT 252
Query: 118 AGSNLIY-SSRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNT 163
G+N IY +SR G+Q + + +N+ PERP QP+C++YM T
Sbjct: 253 GGNNQIYGTSRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENVFPERPGQPECQFYMKT 312
Query: 164 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 313 GDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHP 372
Query: 224 YAGYPIN 230
+ N
Sbjct: 373 MGIFAYN 379
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+GA CKFHHP+++ + ++ LG P RP + C+ Y
Sbjct: 89 EFPERMGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPDEIDCAYY 148
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 149 LRTGQCKFGSTCKFHHP 165
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 137 QMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPL 192
QM++ S+ + PERP +PDC YY+ TG C++G C+F+HP R +A + A G
Sbjct: 31 QMNLRSSETMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIATARMKGE- 89
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P R GQ C Y G CKFG TC+F HP
Sbjct: 90 -FPERMGQPECQYYLKTGTCKFGATCKFHHP 119
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
R++ + ++IL P RPD+ DC YY+ TG CK+G+ CKFHHP+
Sbjct: 120 RDKAGIAGRVSLNIL-----GYPLRPDEIDCAYYLRTGQCKFGSTCKFHHPQ 166
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG+ C+F+HP L A
Sbjct: 48 RPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIA 82
>gi|186477892|gb|ACC85690.1| zinc finger protein [Medicago sativa]
gi|400530100|gb|AFP86282.1| zinc finger protein [Medicago sativa]
Length = 418
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 150/255 (58%), Gaps = 26/255 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ- 59
+R +E C YY+RTG CKFG CKFHHPQPS++ LP+ G+ ++ S ++G Q
Sbjct: 120 LRPNESECAYYLRTGQCKFGNTCKFHHPQPSNM--VLPMRGSPVYPTVQSPT--TAGQQS 175
Query: 60 YAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
YA + WS + Y+ S R QG SY PLI+ QG+V PGW+TY G +G SP
Sbjct: 176 YAAGITNWST--SSYIPSPRWQGPSSYAPLILP--QGVVSVPGWSTYNGQMGSDSPQQTM 231
Query: 119 GSNLIYSSRNQGD-------------LGAGAQMHILSASSQNL-PERPDQPDCRYYMNTG 164
++ Y + +QGD + + +N+ PERPDQP+C++YM TG
Sbjct: 232 RNDQTYGTSHQGDPENAGLPGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTG 291
Query: 165 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
CK+GA C+FHHP+ER + + PLGLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 292 DCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 351
Query: 225 AGYPINYGLSLPPLS 239
+ Y +S PL+
Sbjct: 352 GIF--TYNVSASPLA 364
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+GA C+FHHPK++ + + LG P RP ++ C+ Y
Sbjct: 71 EFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESECAYY 130
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 131 LRTGQCKFGNTCKFHHP 147
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PE P +PDC YY+ TG C++GA C+F+HP R +A + A G P R GQ C Y
Sbjct: 28 PEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGE--FPERLGQPECQYYL 85
Query: 208 MYGICKFGPTCRFDHP 223
G CKFG TCRF HP
Sbjct: 86 KTGTCKFGATCRFHHP 101
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
P RP++ +C YY+ TG CK+G CKFHHP+
Sbjct: 119 PLRPNESECAYYLRTGQCKFGNTCKFHHPQ 148
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
E C YY+RTG C+FG C+F+HP L A
Sbjct: 33 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 64
>gi|255543128|ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223548588|gb|EEF50079.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 448
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 164/298 (55%), Gaps = 34/298 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C YY+RTG CKFG CKFHHPQP+++ +PL G+ ++ S P Y
Sbjct: 147 LRPNEIECAYYLRTGQCKFGSTCKFHHPQPTNV--MVPLRGSPVYPTVQSPTTPGQ-QSY 203
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP---TS 116
G + WS RA +++S R Q SY PLI+ QG+V PGWN Y G +G +S
Sbjct: 204 TGGVTNWS--RASFITSPRWQAPSSYTPLILP--QGVVSVPGWNAYSGQLGSVSSPEGQQ 259
Query: 117 IAGSNLIY-SSRNQGDLGAGAQMHI--LSASSQ-----------NLPERPDQPDCRYYMN 162
G++ IY +SR + G+Q + L A S PERP QP+C++YM
Sbjct: 260 QTGNSQIYGTSRQSESVNTGSQGTLSPLRAGSMPVGFYALQRDNVFPERPGQPECQFYMK 319
Query: 163 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
TG CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YG+CKFGP+C+FDH
Sbjct: 320 TGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGVCKFGPSCKFDH 379
Query: 223 PYAGYPINYGLSLP-----PLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSD 275
P + Y LS P P+ L S A+ T S E DA S P + S+
Sbjct: 380 PMGIF--TYNLSAPSSADAPVRRLLGSSSGSAAL--TLSTEGLVDAGSTKPRRLSLSE 433
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 51/77 (66%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+GA CKFHHPK++ + ++ LG P RP + C+ Y
Sbjct: 98 EFPERIGQPECQYYLKTGTCKFGATCKFHHPKDKAGIAGRVSLNILGYPLRPNEIECAYY 157
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 158 LRTGQCKFGSTCKFHHP 174
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 137 QMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPL 192
QM++ S+ + + PE P +PDC YY+ TG C++GA C+F+HP R +A +AA G
Sbjct: 40 QMNLRSSETMDSGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGE- 98
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P R GQ C Y G CKFG TC+F HP
Sbjct: 99 -FPERIGQPECQYYLKTGTCKFGATCKFHHP 128
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
+++ + ++IL P RP++ +C YY+ TG CK+G+ CKFHHP+
Sbjct: 129 KDKAGIAGRVSLNIL-----GYPLRPNEIECAYYLRTGQCKFGSTCKFHHPQ 175
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
E C YY+RTG C+FG C+F+HP L A
Sbjct: 60 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 91
>gi|297826741|ref|XP_002881253.1| hypothetical protein ARALYDRAFT_345050 [Arabidopsis lyrata subsp.
lyrata]
gi|297327092|gb|EFH57512.1| hypothetical protein ARALYDRAFT_345050 [Arabidopsis lyrata subsp.
lyrata]
Length = 460
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 184/344 (53%), Gaps = 67/344 (19%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ EKSCPYYM+TG C+FGVACKFHHP P P G+++ S PS G Y
Sbjct: 132 MRQGEKSCPYYMQTGLCRFGVACKFHHPHPQ------PSNGHSAYAL---SSFPSVGFPY 182
Query: 61 AGSLPTWSLQRAPY---LSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 117
A + SL A Y ++ +Q+YMP +V+PSQG++P GW TYM
Sbjct: 183 ASGMTMVSLPPATYGAMARPQVPQSQAYMPFMVAPSQGLLPPQGWATYM----------- 231
Query: 118 AGSNLIYSSRNQGDLGAGAQMHI-LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
A SN IYS + Q D + A + + +++ + ER + CR++MNTGTCKYG DCK+ H
Sbjct: 232 AASNPIYSVKAQPDSSSSASVPVAMTSHYHSFSERAE---CRFFMNTGTCKYGDDCKYSH 288
Query: 177 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN-YGLSL 235
PKER+ QS + + P+ LP+RPGQ C N+ YG CKFG +C+FDH P N GL++
Sbjct: 289 PKERLLQSPPNLLNPIVLPARPGQPACGNFKAYGFCKFGASCKFDHSMPLNPYNTTGLAM 348
Query: 236 ----------PPLSI-----------LDSSLMNHQAISA-THSIETSP-DASSKIPN--W 270
PP+S S+L N + +A T S+ET D S P
Sbjct: 349 SSLPTPNPYAPPVSTNLRISSPPSPPDSSTLSNGKPGAAETQSLETEKQDDSPAQPEKSE 408
Query: 271 VQN------SDAVSVQHQNPDMKNSTTKNS--------DDSSKV 300
VQ+ SD+ S+ + PD +N +++N DSSKV
Sbjct: 409 VQDSLPPSCSDSTSLPNVKPDSENPSSENEKQDDNTIQQDSSKV 452
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPLGLPSRPGQAICSNY 206
LPER QPDC Y++ TG CKYG CK+HHPK+R A N+ LG P R G+ C Y
Sbjct: 85 LPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAGPVLFNV--LGFPMRQGEKSCPYY 142
Query: 207 SMYGICKFGPTCRFDHPY 224
G+C+FG C+F HP+
Sbjct: 143 MQTGLCRFGVACKFHHPH 160
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
P+RP + DC++++ TG C YG C+++HP + Q LP R GQ C +
Sbjct: 42 PDRPGERDCQFFLRTGQCGYGNTCRYNHPLTHLPQGVIYYKD--QLPERIGQPDCEYFLK 99
Query: 209 YGICKFGPTCRFDHP 223
G CK+GPTC++ HP
Sbjct: 100 TGACKYGPTCKYHHP 114
>gi|226493386|ref|NP_001141157.1| hypothetical protein [Zea mays]
gi|194702984|gb|ACF85576.1| unknown [Zea mays]
gi|224030547|gb|ACN34349.1| unknown [Zea mays]
gi|407232624|gb|AFT82654.1| C3H11 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413920883|gb|AFW60815.1| hypothetical protein ZEAMMB73_909252 [Zea mays]
Length = 443
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 158/297 (53%), Gaps = 27/297 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKFG CKFHH QPS++ A+ S+ S G S Y
Sbjct: 144 LRPNEKECAYYLRTGQCKFGSTCKFHHSQPSTMMVAV----RGSVYSPGQSATSPGQHAY 199
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS-- 116
G++ +W L R A +++S R G SY +IV P G+V PGW+ Y IG S
Sbjct: 200 QGAVTSWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYTAQIGSSSSEDQQ 257
Query: 117 -IAGSNLIYSSRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMN 162
G+ Y+ Q G Q + + + +NL PERPDQP+C++YM
Sbjct: 258 RTPGAAQYYTGSRQSGTSIGDQGMFSSYQAGSVPVGLYAVQRENLFPERPDQPECQFYMK 317
Query: 163 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
TG CK+GA CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+FDH
Sbjct: 318 TGDCKFGAVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKFDH 377
Query: 223 PYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 279
P YG + P S + + +H E SPD S + +SD+ +
Sbjct: 378 PMGN--AMYGQAPSPASEAPAPRRMLAHVPPSHP-EASPDGGSGRSRRIAHSDSQQI 431
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
P+R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + LG P RP + C+ Y
Sbjct: 95 EYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLNELGYPLRPNEKECAYY 154
Query: 207 SMYGICKFGPTCRFDH 222
G CKFG TC+F H
Sbjct: 155 LRTGQCKFGSTCKFHH 170
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PER +PDC YYM TG C++G CKF+HP +R +A +AA G P R GQ C Y
Sbjct: 52 PERVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAVAAARMKGE--YPQRIGQPECQYYL 109
Query: 208 MYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 110 KTGTCKFGATCKFHHP 125
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP L A
Sbjct: 54 RVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAVA 88
>gi|413920885|gb|AFW60817.1| hypothetical protein ZEAMMB73_909252 [Zea mays]
Length = 407
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 158/297 (53%), Gaps = 27/297 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKFG CKFHH QPS++ A+ S+ S G S Y
Sbjct: 108 LRPNEKECAYYLRTGQCKFGSTCKFHHSQPSTMMVAV----RGSVYSPGQSATSPGQHAY 163
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS-- 116
G++ +W L R A +++S R G SY +IV P G+V PGW+ Y IG S
Sbjct: 164 QGAVTSWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYTAQIGSSSSEDQQ 221
Query: 117 -IAGSNLIYSSRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMN 162
G+ Y+ Q G Q + + + +NL PERPDQP+C++YM
Sbjct: 222 RTPGAAQYYTGSRQSGTSIGDQGMFSSYQAGSVPVGLYAVQRENLFPERPDQPECQFYMK 281
Query: 163 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
TG CK+GA CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+FDH
Sbjct: 282 TGDCKFGAVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKFDH 341
Query: 223 PYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 279
P YG + P S + + +H E SPD S + +SD+ +
Sbjct: 342 PMGN--AMYGQAPSPASEAPAPRRMLAHVPPSHP-EASPDGGSGRSRRIAHSDSQQI 395
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
P+R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + LG P RP + C+ Y
Sbjct: 59 EYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLNELGYPLRPNEKECAYY 118
Query: 207 SMYGICKFGPTCRFDH 222
G CKFG TC+F H
Sbjct: 119 LRTGQCKFGSTCKFHH 134
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PER +PDC YYM TG C++G CKF+HP +R +A +AA G P R GQ C Y
Sbjct: 16 PERVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAVAAARMKGE--YPQRIGQPECQYYL 73
Query: 208 MYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 74 KTGTCKFGATCKFHHP 89
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP L A
Sbjct: 18 RVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAVA 52
>gi|223948513|gb|ACN28340.1| unknown [Zea mays]
gi|413920884|gb|AFW60816.1| hypothetical protein ZEAMMB73_909252 [Zea mays]
Length = 441
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 158/297 (53%), Gaps = 27/297 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKFG CKFHH QPS++ A+ S+ S G S Y
Sbjct: 142 LRPNEKECAYYLRTGQCKFGSTCKFHHSQPSTMMVAV----RGSVYSPGQSATSPGQHAY 197
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS-- 116
G++ +W L R A +++S R G SY +IV P G+V PGW+ Y IG S
Sbjct: 198 QGAVTSWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYTAQIGSSSSEDQQ 255
Query: 117 -IAGSNLIYSSRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMN 162
G+ Y+ Q G Q + + + +NL PERPDQP+C++YM
Sbjct: 256 RTPGAAQYYTGSRQSGTSIGDQGMFSSYQAGSVPVGLYAVQRENLFPERPDQPECQFYMK 315
Query: 163 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
TG CK+GA CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+FDH
Sbjct: 316 TGDCKFGAVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKFDH 375
Query: 223 PYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 279
P YG + P S + + +H E SPD S + +SD+ +
Sbjct: 376 PMGN--AMYGQAPSPASEAPAPRRMLAHVPPSHP-EASPDGGSGRSRRIAHSDSQQI 429
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
P+R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + LG P RP + C+ Y
Sbjct: 93 EYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLNELGYPLRPNEKECAYY 152
Query: 207 SMYGICKFGPTCRFDH 222
G CKFG TC+F H
Sbjct: 153 LRTGQCKFGSTCKFHH 168
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 131 DLGAGAQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASN 188
D A QM++ A PER +PDC YYM TG C++G CKF+HP +R +A +AA
Sbjct: 31 DQEAMWQMNLEEAMELGPYPERVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAVAAARM 90
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFG TC+F HP
Sbjct: 91 KGE--YPQRIGQPECQYYLKTGTCKFGATCKFHHP 123
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP L A
Sbjct: 52 RVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAVA 86
>gi|212275512|ref|NP_001130819.1| uncharacterized protein LOC100191923 [Zea mays]
gi|194690198|gb|ACF79183.1| unknown [Zea mays]
gi|195614544|gb|ACG29102.1| zinc finger CCCH type domain-containing protein ZFN-like [Zea mays]
gi|223942913|gb|ACN25540.1| unknown [Zea mays]
gi|223949665|gb|ACN28916.1| unknown [Zea mays]
gi|238010126|gb|ACR36098.1| unknown [Zea mays]
gi|407232630|gb|AFT82657.1| C3H19 transcription factor, partial [Zea mays subsp. mays]
gi|414588297|tpg|DAA38868.1| TPA: putative Zinc finger CCCH type domain-containing protein ZFN
[Zea mays]
Length = 443
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/313 (39%), Positives = 173/313 (55%), Gaps = 33/313 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKFG CKFHHPQPS++ A+ S+ S G S Y
Sbjct: 144 LRLNEKECAYYLRTGQCKFGSTCKFHHPQPSTMMVAV----RGSVYSPGQSATSPGHHAY 199
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS---PT 115
G++ +W L R A +++S R G SY +IV P G+V PGW+ Y IG S
Sbjct: 200 QGAVTSWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYAAQIGSSSSDDQQ 257
Query: 116 SIAGSNLIYS-SRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYM 161
G+ Y+ SR G G G + + + + ++N+ PERPDQP+C++YM
Sbjct: 258 RTPGAAQYYTGSRQSGTPGIGDRGMFSSYQAGSVPVGLYAVQTENVFPERPDQPECQFYM 317
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+G+ CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+F
Sbjct: 318 KTGDCKFGSVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKFH 377
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQH 281
HP G P+ YG + P S +S A +H E SPD+ S + +SD+
Sbjct: 378 HP-MGNPM-YGHASSPTSEAQTS-RRMLAHVPSHP-EVSPDSGSGRSRRIVHSDS----Q 429
Query: 282 QNPDMKNSTTKNS 294
Q P ++ T + +
Sbjct: 430 QIPSVERITEREA 442
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
P+R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + LG P R + C+ Y
Sbjct: 95 EYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLNELGYPLRLNEKECAYY 154
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 155 LRTGQCKFGSTCKFHHP 171
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PER PDC YYM TG C++G CKF+HP +R +A +AA G P R GQ C Y
Sbjct: 52 PERVGDPDCSYYMRTGMCRFGMTCKFNHPADRKLAVAAARMKGE--YPQRIGQPECQYYL 109
Query: 208 MYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 110 KTGTCKFGATCKFHHP 125
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
R + + Q++ L P R ++ +C YY+ TG CK+G+ CKFHHP+
Sbjct: 126 REKAAMATRVQLNEL-----GYPLRLNEKECAYYLRTGQCKFGSTCKFHHPQ 172
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R + C YYMRTG C+FG+ CKF+HP L A
Sbjct: 54 RVGDPDCSYYMRTGMCRFGMTCKFNHPADRKLAVA 88
>gi|357156745|ref|XP_003577562.1| PREDICTED: zinc finger CCCH domain-containing protein 63-like
isoform 1 [Brachypodium distachyon]
Length = 445
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 164/314 (52%), Gaps = 35/314 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKFG CKF+HPQPS+ AL S+ S G S S Y
Sbjct: 146 LRPNEKECSYYLRTGQCKFGSTCKFNHPQPSNTMVAL----RGSVFSPGQSATSPSQHTY 201
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI- 117
+GS+ W L R A +++S R G SY +IV P G+V PGW+ Y +G S
Sbjct: 202 SGSVTNWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYAAQLGSSSSDDQG 259
Query: 118 --AGSNLIYSSRNQGDLGAGAQMHILSASSQN---------------LPERPDQPDCRYY 160
+G+ Y+ Q + G H + +S Q+ P+RPDQP+C++Y
Sbjct: 260 RSSGAAQYYTGSRQSET-QGMSDHGMISSYQHGSVPAGLYAVQREYIFPDRPDQPECQFY 318
Query: 161 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRF 220
M TG CK+GA CKFHHPKERI S + + PLGLP R G+ IC+ YS YGICKFGP C+F
Sbjct: 319 MKTGDCKFGAVCKFHHPKERIIPSPSCALSPLGLPLRSGEPICTFYSRYGICKFGPNCKF 378
Query: 221 DHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQ 280
DHP + YGL+ P + + H E P SS + ++D
Sbjct: 379 DHPMG--TVMYGLATSPTGEVPTG--RHMLAPVPALSEVPPGNSSGRSRRMTHADT---- 430
Query: 281 HQNPDMKNSTTKNS 294
Q P + ST + +
Sbjct: 431 QQTPSTERSTEREA 444
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 134 AGAQMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 192
A +M + +A + P+R QP+C+YY+ TG CK+GA CKFHHP+E+ A + + L
Sbjct: 83 ADRKMAVAAARMKGEYPQRIGQPECQYYLKTGMCKFGATCKFHHPREKAAMATRVQLNVL 142
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P RP + CS Y G CKFG TC+F+HP
Sbjct: 143 GYPLRPNEKECSYYLRTGQCKFGSTCKFNHP 173
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PER +PDC YYM TG C++G CKF+HP +R +A +AA G P R GQ C Y
Sbjct: 54 PERVGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKGE--YPQRIGQPECQYYL 111
Query: 208 MYGICKFGPTCRFDHP 223
G+CKFG TC+F HP
Sbjct: 112 KTGMCKFGATCKFHHP 127
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
R + + Q+++L P RP++ +C YY+ TG CK+G+ CKF+HP+
Sbjct: 128 REKAAMATRVQLNVL-----GYPLRPNEKECSYYLRTGQCKFGSTCKFNHPQ 174
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP + A
Sbjct: 56 RVGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVA 90
>gi|357156748|ref|XP_003577563.1| PREDICTED: zinc finger CCCH domain-containing protein 63-like
isoform 2 [Brachypodium distachyon]
Length = 447
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 164/314 (52%), Gaps = 35/314 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKFG CKF+HPQPS+ AL S+ S G S S Y
Sbjct: 148 LRPNEKECSYYLRTGQCKFGSTCKFNHPQPSNTMVAL----RGSVFSPGQSATSPSQHTY 203
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI- 117
+GS+ W L R A +++S R G SY +IV P G+V PGW+ Y +G S
Sbjct: 204 SGSVTNWPLSRSASFIASPRWPGHSSYAQVIVPP--GLVQVPGWSPYAAQLGSSSSDDQG 261
Query: 118 --AGSNLIYSSRNQGDLGAGAQMHILSASSQN---------------LPERPDQPDCRYY 160
+G+ Y+ Q + G H + +S Q+ P+RPDQP+C++Y
Sbjct: 262 RSSGAAQYYTGSRQSET-QGMSDHGMISSYQHGSVPAGLYAVQREYIFPDRPDQPECQFY 320
Query: 161 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRF 220
M TG CK+GA CKFHHPKERI S + + PLGLP R G+ IC+ YS YGICKFGP C+F
Sbjct: 321 MKTGDCKFGAVCKFHHPKERIIPSPSCALSPLGLPLRSGEPICTFYSRYGICKFGPNCKF 380
Query: 221 DHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQ 280
DHP + YGL+ P + + H E P SS + ++D
Sbjct: 381 DHPMG--TVMYGLATSPTGEVPTG--RHMLAPVPALSEVPPGNSSGRSRRMTHADT---- 432
Query: 281 HQNPDMKNSTTKNS 294
Q P + ST + +
Sbjct: 433 QQTPSTERSTEREA 446
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Query: 134 AGAQMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 192
A +M + +A + P+R QP+C+YY+ TG CK+GA CKFHHP+E+ A + + L
Sbjct: 85 ADRKMAVAAARMKGEYPQRIGQPECQYYLKTGMCKFGATCKFHHPREKAAMATRVQLNVL 144
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P RP + CS Y G CKFG TC+F+HP
Sbjct: 145 GYPLRPNEKECSYYLRTGQCKFGSTCKFNHP 175
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 123 IYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKER- 180
I S R G A M + + L PER +PDC YYM TG C++G CKF+HP +R
Sbjct: 29 IGSHRVDGVTAAMWHMSLGESMEAGLYPERVGEPDCSYYMRTGLCRFGMTCKFNHPADRK 88
Query: 181 IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+A +AA G P R GQ C Y G+CKFG TC+F HP
Sbjct: 89 MAVAAARMKGE--YPQRIGQPECQYYLKTGMCKFGATCKFHHP 129
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
R + + Q+++L P RP++ +C YY+ TG CK+G+ CKF+HP+
Sbjct: 130 REKAAMATRVQLNVL-----GYPLRPNEKECSYYLRTGQCKFGSTCKFNHPQ 176
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP + A
Sbjct: 58 RVGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVA 92
>gi|224128808|ref|XP_002328972.1| predicted protein [Populus trichocarpa]
gi|222839206|gb|EEE77557.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 142/249 (57%), Gaps = 26/249 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
++ +E C YY+RTG CKFG CKFHHPQP+++ +PL G+ ++ S P
Sbjct: 123 LQPNEIECAYYLRTGQCKFGSTCKFHHPQPTNM--MVPLRGSPIYPTVSSPTTPGQQSYP 180
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIG----PLSPT 115
G TWS RA +++S R Q SY PLI+ QG+V PGWN Y G +G P S
Sbjct: 181 GGLATTWS--RASFITSPRWQAPSSYTPLILP--QGVVSVPGWNAYSGQLGSVSSPESQQ 236
Query: 116 SIAGSNLIYSSRNQGDLGAGAQ--------------MHILSASSQNLPERPDQPDCRYYM 161
S + +SR+ + AG+Q + L S PERP QP+C++YM
Sbjct: 237 QTGNSQIYGTSRHSESVNAGSQGTFSPYRSGSAPLGFYALQRESV-FPERPGQPECQFYM 295
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FD
Sbjct: 296 KTGDCKFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFD 355
Query: 222 HPYAGYPIN 230
HP + N
Sbjct: 356 HPMGVFTYN 364
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+GA CKFHHP+++ S ++ LG P +P + C+ Y
Sbjct: 74 EFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGISGRVSLNILGYPLQPNEIECAYY 133
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 134 LRTGQCKFGSTCKFHHP 150
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 137 QMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPL 192
QM++ S+ + PERP +PDC YY+ TG C++GA C+F+HP R +A +AA G
Sbjct: 16 QMNLRSSETMEAGPYPERPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGE- 74
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P R GQ C Y G CKFG TC+F HP
Sbjct: 75 -FPERIGQPECQYYLKTGTCKFGATCKFHHP 104
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
R++ + ++IL P +P++ +C YY+ TG CK+G+ CKFHHP+
Sbjct: 105 RDKAGISGRVSLNIL-----GYPLQPNEIECAYYLRTGQCKFGSTCKFHHPQ 151
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG C+F+HP L A
Sbjct: 33 RPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 67
>gi|62901479|sp|Q9SWF9.1|ZFNL_PEA RecName: Full=Zinc finger CCCH domain-containing protein ZFN-like
gi|5616313|gb|AAD45720.1| zinc finger protein [Pisum sativum]
Length = 417
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/245 (42%), Positives = 143/245 (58%), Gaps = 22/245 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E YY+RTG CKFG CKFHHPQPS++ L + G+ ++ S P Y
Sbjct: 120 LRPNESERAYYLRTGQCKFGNTCKFHHPQPSNM--VLSMRGSTVYPTVQSPTTPGQ-QSY 176
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
A + WS + Y+ S R QG SY PLI+ QG+V PGW+TY G +G SP
Sbjct: 177 AAGITNWS--SSSYVPSPRWQGPSSYAPLILP--QGVVSVPGWSTYGGQMGSESPQQTMR 232
Query: 120 SNLIYSSRNQGDL-GAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGT 165
++ Y + +QG+L AG Q + + N+ PERPDQP+C++YM TG
Sbjct: 233 NDQTYGTSHQGELENAGLQGAYSQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGD 292
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
CK+GA C+FHHP+ER + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 293 CKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMG 352
Query: 226 GYPIN 230
+ N
Sbjct: 353 IFTYN 357
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+GA C+FHHPK++ + + LG P RP ++ + Y
Sbjct: 71 EFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAYY 130
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 131 LRTGQCKFGNTCKFHHP 147
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 137 QMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPL 192
QM++ S+ + PE P +PDC YY+ TG C++GA C+F+HP R +A + A G
Sbjct: 13 QMNLRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGE- 71
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P R GQ C Y G CKFG TCRF HP
Sbjct: 72 -FPERLGQPECQYYLKTGTCKFGATCRFHHP 101
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
E C YY+RTG C+FG C+F+HP L A
Sbjct: 33 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 64
>gi|115488274|ref|NP_001066624.1| Os12g0405100 [Oryza sativa Japonica Group]
gi|122204753|sp|Q2QT65.1|C3H66_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 66;
Short=OsC3H66
gi|77554746|gb|ABA97542.1| Zinc finger CCCH type domain containing protein ZFN, putative,
expressed [Oryza sativa Japonica Group]
gi|113649131|dbj|BAF29643.1| Os12g0405100 [Oryza sativa Japonica Group]
gi|215767059|dbj|BAG99287.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616953|gb|EEE53085.1| hypothetical protein OsJ_35844 [Oryza sativa Japonica Group]
Length = 454
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/271 (41%), Positives = 148/271 (54%), Gaps = 36/271 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MR +EK C YY+RTG CKF CKFHHPQPS+ A+ S+ S G S Y
Sbjct: 156 MRPNEKECAYYLRTGQCKFASTCKFHHPQPSNTMVAV----RNSMYSPGQSATSPGQHTY 211
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP---- 114
G++ W+L R A +++S R G Y +IV QG+V PGWN Y +G SP
Sbjct: 212 PGAVTNWTLSRSASFIASPRWPGHSGYAQVIVP--QGLVQVPGWNPYAAQMGSSSPDDQQ 269
Query: 115 ---------------TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCR 158
T G + +Y S G + G + + +N+ PERPDQP+C+
Sbjct: 270 RTPVTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVG----VYTVQGENIFPERPDQPECQ 325
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 218
+YM TG CK+GA CKFHHPKER+ + + LGLP RPG+ +C+ YS YGICKFGP C
Sbjct: 326 FYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNC 385
Query: 219 RFDHPYAGYPINYGLSLPPLSILDSSLMNHQ 249
+FDHP + YG + P D S M++Q
Sbjct: 386 KFDHPMG--TLMYGSATSPRG--DVSSMHYQ 412
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
P R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + LG P RP + C+ Y
Sbjct: 107 EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKECAYY 166
Query: 207 SMYGICKFGPTCRFDHP 223
G CKF TC+F HP
Sbjct: 167 LRTGQCKFASTCKFHHP 183
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 129 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 188
Q LG G M S PER +PDC YYM TG C++G CKF+HP R AA+
Sbjct: 49 QMTLGGGESM-----ESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAAR 103
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ P R GQ C Y G CKFG TC+F HP
Sbjct: 104 MNGE-YPYRVGQPECQYYLKTGTCKFGATCKFHHP 137
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + L Q+++L P RP++ +C YY+ TG CK+ + CKFHHP+ A
Sbjct: 138 REKAALANRVQLNVL-----GYPMRPNEKECAYYLRTGQCKFASTCKFHHPQPSNTMVAV 192
Query: 187 SN 188
N
Sbjct: 193 RN 194
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP L A
Sbjct: 66 RIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVA 100
>gi|18403134|ref|NP_565758.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
gi|62901127|sp|O48772.1|C3H26_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 26;
Short=AtC3H26; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN2
gi|4928919|gb|AAD33770.1|AF138744_1 zinc finger protein 2 [Arabidopsis thaliana]
gi|2702272|gb|AAB91975.1| expressed protein [Arabidopsis thaliana]
gi|330253669|gb|AEC08763.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
Length = 453
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 175/337 (51%), Gaps = 59/337 (17%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ EK CPYYM+TG C+FGVACKFHHP P S P G+++ S PS G Y
Sbjct: 128 MRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQ----PSNGHSAYAM---SSFPSVGFPY 180
Query: 61 AGSLPTWSLQRAPYLS---SRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 117
A + SL A Y + ++ +Q+YMP +V+PSQG++P GW TYM
Sbjct: 181 ASGMTMVSLPPATYGAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYM----------- 229
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHH 176
SN IY+ + Q D + A + + S + ER + CR++MNTGTCKYG DCK+ H
Sbjct: 230 TASNPIYNMKTQLDSSSSASVAVTVTSHHHSFSERAE---CRFFMNTGTCKYGDDCKYSH 286
Query: 177 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH-------------- 222
PKER+ QS + + P+ LP+RPGQ C N+ YG CKFG C+FDH
Sbjct: 287 PKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYNNTGLAM 346
Query: 223 -----PYAGYP---INYGLSLPPLSILDSSLMNHQ-AISATHSIETSP-DASSKIPNWVQ 272
PY P N +S PP ++L N + A + S+ET D S P +
Sbjct: 347 SSLPTPYPYAPPVSTNLRISSPPSPSDMTTLSNGKPAAAEAQSLETEKQDDSPTEPEKSE 406
Query: 273 --------NSDAVSVQHQNPDMKNSTTKNSDDSSKVD 301
SD+ S+ + PD + T K DDS+++D
Sbjct: 407 VEDSLPPNGSDSTSLPNDKPDAE--TEKQDDDSAELD 441
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPLGLPSRPGQAICSNY 206
LPER QPDC TG CKYG CK+HHPK+R A N+ LGLP R G+ C Y
Sbjct: 85 LPERVGQPDCE----TGACKYGPTCKYHHPKDRNGAGPVLFNV--LGLPMRQGEKPCPYY 138
Query: 207 SMYGICKFGPTCRFDHPY 224
G+C+FG C+F HP+
Sbjct: 139 MQTGLCRFGVACKFHHPH 156
>gi|356531908|ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Glycine max]
Length = 426
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 141/245 (57%), Gaps = 22/245 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C YY+RTG CKFG CKFHHPQP+++ L + + ++ S P Y
Sbjct: 128 LRPNEPECAYYLRTGQCKFGNTCKFHHPQPNNM--VLSMRSSPVYPTVHSPTTPGQ-QSY 184
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
A + WS + Y+ S R QG SY PLI+ QG+V PGW+ Y G +G SP G
Sbjct: 185 ATGITNWS--SSSYIPSPRWQGPSSYAPLILP--QGMVSVPGWSAYSGQMGSDSPQQTMG 240
Query: 120 SNLIYSSRNQ------GDLGAGAQMH-------ILSASSQNL-PERPDQPDCRYYMNTGT 165
+ Y + Q G GA +Q + +N+ PERPDQP+C++YM TG
Sbjct: 241 NGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGD 300
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 301 CKFGAVCRFHHPRERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMG 360
Query: 226 GYPIN 230
+ N
Sbjct: 361 VFTYN 365
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLGLPSRPGQAICS 204
PER QP+C+YY+ TGTCK+GA C+FHHP+++ IA A NI LG P RP + C+
Sbjct: 79 EFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVAMNI--LGYPLRPNEPECA 136
Query: 205 NYSMYGICKFGPTCRFDHP 223
Y G CKFG TC+F HP
Sbjct: 137 YYLRTGQCKFGNTCKFHHP 155
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PE P +PDC YY+ TG C++GA C+F+HP R +A +AA G P R GQ C Y
Sbjct: 36 PEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGE--FPERIGQPECQYYL 93
Query: 208 MYGICKFGPTCRFDHP 223
G CKFG TCRF HP
Sbjct: 94 KTGTCKFGATCRFHHP 109
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
E C YY+RTG C+FG C+F+HP L A
Sbjct: 41 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 72
>gi|334184645|ref|NP_001189661.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
gi|330253670|gb|AEC08764.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
Length = 467
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 175/337 (51%), Gaps = 59/337 (17%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MRQ EK CPYYM+TG C+FGVACKFHHP P S P G+++ S PS G Y
Sbjct: 128 MRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQ----PSNGHSAYAM---SSFPSVGFPY 180
Query: 61 AGSLPTWSLQRAPYLS---SRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 117
A + SL A Y + ++ +Q+YMP +V+PSQG++P GW TYM
Sbjct: 181 ASGMTMVSLPPATYGAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYM----------- 229
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHH 176
SN IY+ + Q D + A + + S + ER + CR++MNTGTCKYG DCK+ H
Sbjct: 230 TASNPIYNMKTQLDSSSSASVAVTVTSHHHSFSERAE---CRFFMNTGTCKYGDDCKYSH 286
Query: 177 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH-------------- 222
PKER+ QS + + P+ LP+RPGQ C N+ YG CKFG C+FDH
Sbjct: 287 PKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYNNTGLAM 346
Query: 223 -----PYAGYP---INYGLSLPPLSILDSSLMNHQ-AISATHSIETSP-DASSKIPNWVQ 272
PY P N +S PP ++L N + A + S+ET D S P +
Sbjct: 347 SSLPTPYPYAPPVSTNLRISSPPSPSDMTTLSNGKPAAAEAQSLETEKQDDSPTEPEKSE 406
Query: 273 --------NSDAVSVQHQNPDMKNSTTKNSDDSSKVD 301
SD+ S+ + PD + T K DDS+++D
Sbjct: 407 VEDSLPPNGSDSTSLPNDKPDAE--TEKQDDDSAELD 441
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPLGLPSRPGQAICSNY 206
LPER QPDC TG CKYG CK+HHPK+R A N+ LGLP R G+ C Y
Sbjct: 85 LPERVGQPDCE----TGACKYGPTCKYHHPKDRNGAGPVLFNV--LGLPMRQGEKPCPYY 138
Query: 207 SMYGICKFGPTCRFDHPY 224
G+C+FG C+F HP+
Sbjct: 139 MQTGLCRFGVACKFHHPH 156
>gi|356531906|ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Glycine max]
Length = 428
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 141/245 (57%), Gaps = 22/245 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C YY+RTG CKFG CKFHHPQP+++ L + + ++ S P Y
Sbjct: 130 LRPNEPECAYYLRTGQCKFGNTCKFHHPQPNNM--VLSMRSSPVYPTVHSPTTPGQ-QSY 186
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
A + WS + Y+ S R QG SY PLI+ QG+V PGW+ Y G +G SP G
Sbjct: 187 ATGITNWS--SSSYIPSPRWQGPSSYAPLILP--QGMVSVPGWSAYSGQMGSDSPQQTMG 242
Query: 120 SNLIYSSRNQ------GDLGAGAQMH-------ILSASSQNL-PERPDQPDCRYYMNTGT 165
+ Y + Q G GA +Q + +N+ PERPDQP+C++YM TG
Sbjct: 243 NGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGD 302
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 303 CKFGAVCRFHHPRERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMG 362
Query: 226 GYPIN 230
+ N
Sbjct: 363 VFTYN 367
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLGLPSRPGQAICS 204
PER QP+C+YY+ TGTCK+GA C+FHHP+++ IA A NI LG P RP + C+
Sbjct: 81 EFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVAMNI--LGYPLRPNEPECA 138
Query: 205 NYSMYGICKFGPTCRFDHP 223
Y G CKFG TC+F HP
Sbjct: 139 YYLRTGQCKFGNTCKFHHP 157
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 131 DLGAGAQMHILSASSQNL-----PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQS 184
D+ + A I SS+ + PE P +PDC YY+ TG C++GA C+F+HP R +A +
Sbjct: 15 DVVSDAMWQINLRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 74
Query: 185 AASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
AA G P R GQ C Y G CKFG TCRF HP
Sbjct: 75 AARMKGE--FPERIGQPECQYYLKTGTCKFGATCRFHHP 111
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
E C YY+RTG C+FG C+F+HP L A
Sbjct: 43 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 74
>gi|357154003|ref|XP_003576637.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
[Brachypodium distachyon]
Length = 442
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 160/299 (53%), Gaps = 30/299 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKF CKFHHPQPSS A+ S+ S G S Y
Sbjct: 142 LRPNEKECAYYLRTGQCKFASTCKFHHPQPSSTMVAV----RGSMYSPGQSATSPGQNTY 197
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP---T 115
G++ W++ R A +++S R G Y +IV Q IV PGWN Y IG SP
Sbjct: 198 PGAVTNWNMSRSASFIASPRWPGHSGYAQVIVP--QSIVQVPGWNPYAAQIGSSSPDDQQ 255
Query: 116 SIAGSNLIYSSRNQ------GDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYM 161
G+ YS Q GD G AG+ + + + N+ PERPDQP+C++YM
Sbjct: 256 RTPGTTHYYSGSRQSETTGMGDHGMFPSYQAGSVPLGVYAVQGDNVFPERPDQPECQFYM 315
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA CKF+HPKER+ + + PLGLP RPG+ +C+ YS YGICKFGP C+FD
Sbjct: 316 KTGDCKFGAVCKFNHPKERMIPAPNCALSPLGLPLRPGEPVCTFYSRYGICKFGPNCKFD 375
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQ-AISATHSIETSPDASSKIPNWVQNSDAVSV 279
HP + YG P S D +++Q A S HS S + V SD+ +
Sbjct: 376 HPMG--TVMYGSVTSPTS--DVPTLHYQLAPSPGHSERLLDGGGSGRSHRVPQSDSQHI 430
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
P R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + + LG P RP + C+ Y
Sbjct: 93 EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRAQLNVLGYPLRPNEKECAYY 152
Query: 207 SMYGICKFGPTCRFDHP 223
G CKF TC+F HP
Sbjct: 153 LRTGQCKFASTCKFHHP 169
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 129 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 188
Q LG G + S PER +PDC YYM TG C++G CKF+HP R AA+
Sbjct: 34 QMSLGGGGE----SMEPGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAAR 89
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ P R GQ C Y G CKFG TC+F HP
Sbjct: 90 MNGE-YPYRVGQPECQYYLKTGTCKFGATCKFHHP 123
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + + AQ+++L P RP++ +C YY+ TG CK+ + CKFHHP Q ++
Sbjct: 124 REKAAIATRAQLNVL-----GYPLRPNEKECAYYLRTGQCKFASTCKFHHP-----QPSS 173
Query: 187 SNIGPLGLPSRPGQAICS 204
+ + G PGQ+ S
Sbjct: 174 TMVAVRGSMYSPGQSATS 191
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG+ CKF+HP L A
Sbjct: 52 RIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVA 86
>gi|168031758|ref|XP_001768387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680312|gb|EDQ66749.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 134/242 (55%), Gaps = 43/242 (17%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYMRTGSCK+GV CKFHHPQP+++G +PL +
Sbjct: 114 LRLGEKECAYYMRTGSCKYGVTCKFHHPQPATVGGMVPLP-------------------F 154
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSY---MPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 117
+P+W L R+P+ R+Q SY MPL QGI+ GWN Y + GP+ P
Sbjct: 155 GSGVPSWPLTRSPFPLPRMQAPSSYGTMMPL----QQGIMSMAGWN-YQVSQGPVGPAEG 209
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLP----------------ERPDQPDCRYYM 161
++ QG+ +G ++ +S+ LP ERP QP+C+YYM
Sbjct: 210 HQQGYVFGGAPQGEHVSGYGPYMQGSSAVGLPAHQATQAVGGQETVFPERPGQPECQYYM 269
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+G+ C++HHPK+R S ++ P+GLP RPG CS YS YGICKFGPTC+FD
Sbjct: 270 KTGDCKFGSTCRYHHPKDRATPSPTCHLSPMGLPLRPGNPPCSFYSRYGICKFGPTCKFD 329
Query: 222 HP 223
HP
Sbjct: 330 HP 331
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER P+C+YY+ TGTCK+GA CK+HHP+E+ + ++ LGLP R G+ C+ Y
Sbjct: 65 EYPERVGHPECQYYLKTGTCKFGATCKYHHPREKAGSTGRVHLNVLGLPLRLGEKECAYY 124
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC+F HP
Sbjct: 125 MRTGSCKYGVTCKFHHP 141
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PERP +PDC YYM TG C +G C+++HP R +AA+ G P R G C Y
Sbjct: 22 PERPGEPDCVYYMRTGLCGFGMTCRYNHPPNRKLAAAATR-GKGEYPERVGHPECQYYLK 80
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC++ HP
Sbjct: 81 TGTCKFGATCKYHHP 95
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
LP R + +C YYM TG+CKYG CKFHHP+
Sbjct: 111 GLPLRLGEKECAYYMRTGSCKYGVTCKFHHPQ 142
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C FG+ C+++HP L A
Sbjct: 24 RPGEPDCVYYMRTGLCGFGMTCRYNHPPNRKLAAA 58
>gi|326503628|dbj|BAJ86320.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 145/260 (55%), Gaps = 28/260 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +EK C YY+RTG CKF CKFHHPQPSS A+ +S+ S G S Y
Sbjct: 144 LRLNEKECVYYLRTGQCKFASTCKFHHPQPSSTMVAI----RSSICSPGQSTTSPGQNTY 199
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS---PT 115
+G++ WSL R A +++S R G Y +IV QG+V PGWN Y +G S
Sbjct: 200 SGAVTNWSLSRSASFIASPRWPGPSGYEQVIVP--QGLVQVPGWNPYAAQMGSSSLDGQQ 257
Query: 116 SIAGSNLIYSSRNQGDLGAG------------AQMHILSASSQN-LPERPDQPDCRYYMN 162
G+ Y + + G G A + + + +N PERP+QP+C++YM
Sbjct: 258 RTPGTAHYYGTHQRETTGMGEHGMFTSHKAGSAPLGVYAVQGENTFPERPEQPECQFYMK 317
Query: 163 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
TG CK+GA CKF+HPK+R+ + + PLGLP RPG+ IC+ YS YGICKFGP C+FDH
Sbjct: 318 TGDCKFGAVCKFNHPKKRMVPAPNCALSPLGLPLRPGEPICTFYSRYGICKFGPNCKFDH 377
Query: 223 PYA----GYPINYGLSLPPL 238
P G P + +PPL
Sbjct: 378 PMGTILYGSPTSPTGDVPPL 397
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
P R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + ++ + LG P R + C Y
Sbjct: 95 EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNEKECVYY 154
Query: 207 SMYGICKFGPTCRFDHP 223
G CKF TC+F HP
Sbjct: 155 LRTGQCKFASTCKFHHP 171
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 129 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAAS 187
Q LG G LS PER + DC YYM TG C++G CKF+HP +R +A +AA
Sbjct: 36 QMTLGCGG----LSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVAAAR 91
Query: 188 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFG TC+F HP
Sbjct: 92 MKGE--YPYRVGQPECQYYLKTGTCKFGATCKFHHP 125
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 67/177 (37%), Gaps = 58/177 (32%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E+ C YYMRTG C+FGV CKF+HP L A
Sbjct: 54 RIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVA------------------------- 88
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
++R++G Y V P Y+ +
Sbjct: 89 --------------AARMKGEYPYR----------VGQPECQYYLKT----GTCKFGATC 120
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
+ R + + AQ+++L P R ++ +C YY+ TG CK+ + CKFHHP+
Sbjct: 121 KFHHPREKAAIAISAQLNVL-----GYPLRLNEKECVYYLRTGQCKFASTCKFHHPQ 172
>gi|224146159|ref|XP_002325901.1| predicted protein [Populus trichocarpa]
gi|222862776|gb|EEF00283.1| predicted protein [Populus trichocarpa]
Length = 414
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 143/249 (57%), Gaps = 26/249 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C YY+RTG CKFG CKFHHPQP+++ +PL G+ ++ S P Y
Sbjct: 112 LRLNEMECAYYLRTGQCKFGSTCKFHHPQPTNV--MVPLRGSPVYPTVNSPTTPGQ-QSY 168
Query: 61 AGSLPT-WSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIG----PLSP 114
G L T WS RA +++S R Q +Y PLI+ QG+V PGWN Y G +G P S
Sbjct: 169 PGGLATNWS--RASFITSPRWQAPSNYTPLILP--QGVVSVPGWNAYSGQVGSVSSPESQ 224
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYM 161
S + +SR + AG+Q M + +++ PERP QP+C++YM
Sbjct: 225 QQTGNSQIYGTSRQNESVNAGSQGTFSPYRSDSVPMGFYALQRESVFPERPGQPECQFYM 284
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA C+FHHP+ER+ + + +GLP RPG+ +C YS YGICKFGP+C+F
Sbjct: 285 KTGDCKFGAVCRFHHPRERLIPAPDCVLSAIGLPLRPGEPLCIFYSRYGICKFGPSCKFH 344
Query: 222 HPYAGYPIN 230
HP + N
Sbjct: 345 HPMGIFTYN 353
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+GA CKFHHP+++ S ++ LG P R + C+ Y
Sbjct: 63 EFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGVSGRVSLNILGYPLRLNEMECAYY 122
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 123 LRTGQCKFGSTCKFHHP 139
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 137 QMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPL 192
QM++ S+ + PERP +PDC YY+ TG C++G C+F+HP R +A +AA G
Sbjct: 5 QMNLRSSETMEAGPYPERPGEPDCSYYIRTGLCRFGPTCRFNHPPNRKLAIAAARMKGE- 63
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P R GQ C Y G CKFG TC+F HP
Sbjct: 64 -FPERIGQPECQYYLKTGTCKFGATCKFHHP 93
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
R++ + ++IL P R ++ +C YY+ TG CK+G+ CKFHHP+
Sbjct: 94 RDKAGVSGRVSLNIL-----GYPLRLNEMECAYYLRTGQCKFGSTCKFHHPQ 140
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG C+F+HP L A
Sbjct: 22 RPGEPDCSYYIRTGLCRFGPTCRFNHPPNRKLAIA 56
>gi|297735285|emb|CBI17647.3| unnamed protein product [Vitis vinifera]
Length = 304
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 148/281 (52%), Gaps = 45/281 (16%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R DE C YY+RTG CKFG CKFHHPQPSS+ +L N
Sbjct: 51 LRPDEIDCAYYLRTGQCKFGSTCKFHHPQPSSMMVSLRGITN------------------ 92
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS--I 117
W L RA ++ S R Q SY PL++ QG+V PGWN Y G +G S +
Sbjct: 93 ------WPLSRASFIPSPRWQAPSSYAPLMLP--QGVVSVPGWNAYSGQLGSPSESQQQT 144
Query: 118 AGSNLIY-SSRNQGDLGAGAQ------------MHILSASSQN-LPERPDQPDCRYYMNT 163
G+N IY +SR G+Q + + +N PERP QP+C++YM T
Sbjct: 145 GGNNQIYGTSRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENVFPERPGQPECQFYMKT 204
Query: 164 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 205 GDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHP 264
Query: 224 YAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDAS 264
+ N S + + L+ H+A AT + DAS
Sbjct: 265 MGIFAYNLSASSSADAPVVRRLL-HKA-QATFTARDKTDAS 303
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 218
YY+ TGTCK+GA CKFHHP+++ + ++ LG P RP + C+ Y G CKFG TC
Sbjct: 14 YYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPDEIDCAYYLRTGQCKFGSTC 73
Query: 219 RFDHP 223
+F HP
Sbjct: 74 KFHHP 78
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
R++ + ++IL P RPD+ DC YY+ TG CK+G+ CKFHHP+
Sbjct: 33 RDKAGIAGRVSLNIL-----GYPLRPDEIDCAYYLRTGQCKFGSTCKFHHPQ 79
>gi|356576638|ref|XP_003556437.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Glycine max]
Length = 416
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 141/249 (56%), Gaps = 40/249 (16%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C YY+RTG CKFG CKFHHPQPS++ L L G S Y
Sbjct: 127 LRPNEPECTYYLRTGQCKFGNTCKFHHPQPSNM--MLSLRGQES---------------Y 169
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS----PT 115
AG + WS R Y+ S R QG SY PLI+ QG+V PGW+ Y G +G +S P
Sbjct: 170 AGGITNWS--RGSYIPSPRWQGPSSYGPLILP--QGVVSVPGWSAYSGQMGSISTSDSPQ 225
Query: 116 SIAGSNLIYSSRNQGDLG-AGAQ------------MHILSASSQNL-PERPDQPDCRYYM 161
+ Y + +QG+L AG+Q + + +N+ PERP QP+C++Y+
Sbjct: 226 QAMRNGQTYETSHQGELANAGSQGAYSQFRSGTVPVGFYTLQRENIFPERPGQPECQFYV 285
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA C+FHHP+ER+ + + P+GLP R G+ +C YS YGICKFGP+C+FD
Sbjct: 286 KTGDCKFGAVCQFHHPRERLIPAPDCVLSPIGLPLRLGEPLCVFYSRYGICKFGPSCKFD 345
Query: 222 HPYAGYPIN 230
HP + N
Sbjct: 346 HPMEIFSYN 354
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLGLPSRPGQAICS 204
PER QP+C+YY+ TGTCK+GA CKFHHPK++ IA A NI LG P RP + C+
Sbjct: 78 EFPERIGQPECQYYLKTGTCKFGATCKFHHPKDQAGIAGRVALNI--LGYPLRPNEPECT 135
Query: 205 NYSMYGICKFGPTCRFDHPYAGYPINYGLSL 235
Y G CKFG TC+F HP P N LSL
Sbjct: 136 YYLRTGQCKFGNTCKFHHP---QPSNMMLSL 163
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH-PKERIAQSAASNIGPLGLPSRPGQ 200
+ S + PERP +PDC YY+ TG C++GA C+F+H P R+A + A IG P R GQ
Sbjct: 28 TMDSGSYPERPGEPDCSYYIRTGLCRFGATCRFNHPPNRRLAIATARMIGE--FPERIGQ 85
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C Y G CKFG TC+F HP
Sbjct: 86 PECQYYLKTGTCKFGATCKFHHP 108
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG C+F+HP L A
Sbjct: 37 RPGEPDCSYYIRTGLCRFGATCRFNHPPNRRLAIA 71
>gi|297598193|ref|NP_001045201.2| Os01g0917400 [Oryza sativa Japonica Group]
gi|62901482|sp|Q5JLB5.2|C3H12_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 12;
Short=OsC3H12; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 2
gi|57900442|dbj|BAD87735.1| putative zinc finger protein [Oryza sativa Japonica Group]
gi|215704392|dbj|BAG93826.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674001|dbj|BAF07115.2| Os01g0917400 [Oryza sativa Japonica Group]
gi|343466345|gb|AEM43044.1| CCCH-type zinc finger protein [Oryza sativa Indica Group]
Length = 439
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 136/253 (53%), Gaps = 36/253 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS----- 55
+R EK C YY++TG CK+G CKFHHP+ NA S GS + PS
Sbjct: 170 LRPSEKECAYYLKTGQCKYGNTCKFHHPE----------LFNAMASSRGSPIYPSVHSSA 219
Query: 56 -SGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS 113
+G Y G++ +W+ R ++ S R Q +Y P+IV QG+V P WN+Y G + P+S
Sbjct: 220 TAGPPYTGTMASWAFPRGSFIPSPRWQNPSNYAPMIVP--QGLVQVPSWNSYTGQMMPVS 277
Query: 114 PTSIA----GSNLIYSSRNQGDLGAGAQMHILSASSQN-------------LPERPDQPD 156
+ G+ Y + Q D AG Q + S + PERPDQP+
Sbjct: 278 SSESRLQSPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPE 337
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+YYM TG CK+GA CKFHHP+ R + + P+GLP RPG+ +C YS YGICKFG
Sbjct: 338 CQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGA 397
Query: 217 TCRFDHPYAGYPI 229
C+FDHP P+
Sbjct: 398 NCKFDHPTMAPPM 410
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P RP + C+ Y
Sbjct: 121 EYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYY 180
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC+F HP
Sbjct: 181 LKTGQCKYGNTCKFHHP 197
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PER +PDC YY+ TG C++G C+F+HP++R +A ++A G P R GQ C Y
Sbjct: 78 PERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGE--YPERMGQPECQYYL 135
Query: 208 MYGICKFGPTCRFDHP 223
G CKFGPTC+F HP
Sbjct: 136 KTGTCKFGPTCKFHHP 151
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK--ERIAQS 184
R + + Q++ L P RP + +C YY+ TG CKYG CKFHHP+ +A S
Sbjct: 152 REKAGIAGRVQLNTL-----GYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASS 206
Query: 185 AASNIGP 191
S I P
Sbjct: 207 RGSPIYP 213
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG++C+F+HPQ +L A
Sbjct: 80 RSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIA 114
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+++ S + + P P R G+ C+ Y G+C+FG +CRF+HP
Sbjct: 62 QQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHP 106
>gi|57900443|dbj|BAD87736.1| putative zinc finger protein [Oryza sativa Japonica Group]
Length = 322
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 134/247 (54%), Gaps = 36/247 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS----- 55
+R EK C YY++TG CK+G CKFHHP+ NA S GS + PS
Sbjct: 53 LRPSEKECAYYLKTGQCKYGNTCKFHHPE----------LFNAMASSRGSPIYPSVHSSA 102
Query: 56 -SGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS 113
+G Y G++ +W+ R ++ S R Q +Y P+IV QG+V P WN+Y G + P+S
Sbjct: 103 TAGPPYTGTMASWAFPRGSFIPSPRWQNPSNYAPMIVP--QGLVQVPSWNSYTGQMMPVS 160
Query: 114 PTSIA----GSNLIYSSRNQGDLGAGAQMHILSASSQN-------------LPERPDQPD 156
+ G+ Y + Q D AG Q + S + PERPDQP+
Sbjct: 161 SSESRLQSPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPE 220
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+YYM TG CK+GA CKFHHP+ R + + P+GLP RPG+ +C YS YGICKFG
Sbjct: 221 CQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGA 280
Query: 217 TCRFDHP 223
C+FDHP
Sbjct: 281 NCKFDHP 287
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P RP + C+ Y
Sbjct: 4 EYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYY 63
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC+F HP
Sbjct: 64 LKTGQCKYGNTCKFHHP 80
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK--ERIAQS 184
R + + Q++ L P RP + +C YY+ TG CKYG CKFHHP+ +A S
Sbjct: 35 REKAGIAGRVQLNTL-----GYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASS 89
Query: 185 AASNIGP 191
S I P
Sbjct: 90 RGSPIYP 96
>gi|222619758|gb|EEE55890.1| hypothetical protein OsJ_04549 [Oryza sativa Japonica Group]
Length = 380
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 136/253 (53%), Gaps = 36/253 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS----- 55
+R EK C YY++TG CK+G CKFHHP+ NA S GS + PS
Sbjct: 111 LRPSEKECAYYLKTGQCKYGNTCKFHHPE----------LFNAMASSRGSPIYPSVHSSA 160
Query: 56 -SGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS 113
+G Y G++ +W+ R ++ S R Q +Y P+IV QG+V P WN+Y G + P+S
Sbjct: 161 TAGPPYTGTMASWAFPRGSFIPSPRWQNPSNYAPMIVP--QGLVQVPSWNSYTGQMMPVS 218
Query: 114 PTSIA----GSNLIYSSRNQGDLGAGAQMHILSASSQN-------------LPERPDQPD 156
+ G+ Y + Q D AG Q + S + PERPDQP+
Sbjct: 219 SSESRLQSPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPE 278
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+YYM TG CK+GA CKFHHP+ R + + P+GLP RPG+ +C YS YGICKFG
Sbjct: 279 CQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGA 338
Query: 217 TCRFDHPYAGYPI 229
C+FDHP P+
Sbjct: 339 NCKFDHPTMAPPM 351
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P RP + C+ Y
Sbjct: 62 EYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYY 121
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC+F HP
Sbjct: 122 LKTGQCKYGNTCKFHHP 138
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PER +PDC YY+ TG C++G C+F+HP++R +A ++A G P R GQ C Y
Sbjct: 19 PERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKG--EYPERMGQPECQYYL 76
Query: 208 MYGICKFGPTCRFDHP 223
G CKFGPTC+F HP
Sbjct: 77 KTGTCKFGPTCKFHHP 92
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK--ERIAQS 184
R + + Q++ L P RP + +C YY+ TG CKYG CKFHHP+ +A S
Sbjct: 93 REKAGIAGRVQLNTL-----GYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASS 147
Query: 185 AASNIGP 191
S I P
Sbjct: 148 RGSPIYP 154
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG++C+F+HPQ +L A
Sbjct: 21 RSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIA 55
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+++ S + + P P R G+ C+ Y G+C+FG +CRF+HP
Sbjct: 3 QQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHP 47
>gi|356535246|ref|XP_003536159.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Glycine max]
Length = 421
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/240 (42%), Positives = 138/240 (57%), Gaps = 31/240 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C YY+RTG CKFG CKFHHPQPS++ L L G+ ++ S P Y
Sbjct: 128 LRPNEPECTYYLRTGQCKFGNTCKFHHPQPSNM--MLSLRGSPVYPTVHSPTTPGQ-QSY 184
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS----PT 115
AG Y+ S R QG SY PLI+ QG+V PGW+ Y G +G +S P
Sbjct: 185 AGGT---------YIPSPRWQGPSSYAPLILP--QGVVSVPGWSAYSGQMGSISTSDSPQ 233
Query: 116 SIAGSNLIYSSRNQGDL----GAGAQMH-------ILSASSQNL-PERPDQPDCRYYMNT 163
+ Y + QG+L GA +Q + +N+ PERP QP+C++YM T
Sbjct: 234 QAMRNGQTYGTSRQGELAGSQGAYSQFRSGTVPVGFYTLQRENIFPERPGQPECQFYMKT 293
Query: 164 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 294 GDCKFGAVCRFHHPQERLVPAPNCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 353
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLGLPSRPGQAICS 204
PER QP+C+YY+ TGTCK+GA CKFHHPK++ IA A NI LG P RP + C+
Sbjct: 79 EFPERIGQPECQYYLKTGTCKFGATCKFHHPKDQAGIAGRVALNI--LGYPLRPNEPECT 136
Query: 205 NYSMYGICKFGPTCRFDHPYAGYPINYGLSL 235
Y G CKFG TC+F HP P N LSL
Sbjct: 137 YYLRTGQCKFGNTCKFHHP---QPSNMMLSL 164
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAIC 203
S + PERP +PDC YYM TG C++GA C+F+HP R +A + A IG P R GQ C
Sbjct: 32 SGSYPERPGEPDCSYYMRTGLCRFGATCRFNHPPNRKLAIATARMIGE--FPERIGQPEC 89
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y G CKFG TC+F HP
Sbjct: 90 QYYLKTGTCKFGATCKFHHP 109
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YYMRTG C+FG C+F+HP L A
Sbjct: 38 RPGEPDCSYYMRTGLCRFGATCRFNHPPNRKLAIA 72
>gi|356568481|ref|XP_003552439.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Glycine max]
Length = 428
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 143/254 (56%), Gaps = 24/254 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C YY+RTG CKFG CKFHHPQP+++ L + + ++ S P Y
Sbjct: 130 LRPNEPECGYYLRTGQCKFGNTCKFHHPQPNNM--VLSMRSSPVYPTVHSPTTPGH-QSY 186
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
A + WS + Y+ S R QG SY PLI+ QG+V GW+ Y G +G SP
Sbjct: 187 ATGITNWS--SSSYIPSPRWQGPSSYAPLILP--QGMVSVSGWSAYSGQMGSDSPQQTMA 242
Query: 120 SNLIYSSRNQ------GDLGAGAQMH-------ILSASSQNL-PERPDQPDCRYYMNTGT 165
+ Y + Q G GA +Q + +N+ PERPDQP+C++YM TG
Sbjct: 243 NGQSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGD 302
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
CK+GA C+FHHP ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 303 CKFGAVCRFHHPHERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMG 362
Query: 226 GYPINYGLSLPPLS 239
+ Y +S PL+
Sbjct: 363 VF--TYNMSASPLA 374
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLGLPSRPGQAICS 204
PER QP+C+YY+ TGTCK+GA C+FHHP+++ IA A NI LG P RP + C
Sbjct: 81 EFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVALNI--LGYPLRPNEPECG 138
Query: 205 NYSMYGICKFGPTCRFDHP 223
Y G CKFG TC+F HP
Sbjct: 139 YYLRTGQCKFGNTCKFHHP 157
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQ 200
+ S+ PE P +PDC YY+ TG C++GA C+F+HP R +A +AA G P R GQ
Sbjct: 31 TMESEPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGE--FPERIGQ 88
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C Y G CKFG TCRF HP
Sbjct: 89 PECQYYLKTGTCKFGATCRFHHP 111
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
E C YY+RTG C+FG C+F+HP L A
Sbjct: 43 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 74
>gi|413951532|gb|AFW84181.1| hypothetical protein ZEAMMB73_594165 [Zea mays]
Length = 375
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 137/250 (54%), Gaps = 34/250 (13%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R + C YY++TG+CKFG CKFHHP+ + + G L ++G +LPS Y
Sbjct: 114 RVGQPECQYYLKTGTCKFGPTCKFHHPREKAG-----IAGRVQLNTLGYPLLPS----YT 164
Query: 62 GSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
G++ +W+ RA ++ S R Q +Y P++V G+V P WN+Y G + SP G+
Sbjct: 165 GTMSSWTFPRASFIPSPRWQSPSNYAPMVVP--HGLVQVPSWNSYPGQL--QSP----GA 216
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQNLP-------------ERPDQPDCRYYMNTGTCK 167
Y S QG+ AG Q + S + P ERPD+P+C+YYM TG CK
Sbjct: 217 QQTYGSSQQGEASAGNQGMLSPYRSSSFPVPQYALQRDNVFPERPDEPECQYYMKTGDCK 276
Query: 168 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 227
+GA CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP
Sbjct: 277 FGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYSRYGICKFGANCKFDHPTMAA 336
Query: 228 PIN---YGLS 234
P+ YG S
Sbjct: 337 PMGVYAYGFS 346
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 131 DLGAGAQMHILSASSQ---NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAA 186
+ G QM + S ++ + PERP +PDC YY+ TG C++G C+F+HP +R +A ++A
Sbjct: 46 EEGMWQQMAMNSGATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASA 105
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFGPTC+F HP
Sbjct: 106 RMKGE--YPERVGQPECQYYLKTGTCKFGPTCKFHHP 140
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P P +
Sbjct: 110 EYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLLPSYTGTMSS 169
Query: 207 SMYGICKFGPTCRFDHP--YAGYPINYGL 233
+ F P+ R+ P YA + +GL
Sbjct: 170 WTFPRASFIPSPRWQSPSNYAPMVVPHGL 198
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSS 56
+R E+ C +Y R G CKFG CKF HP A P+ A S +SV P+S
Sbjct: 305 IRPGEELCKFYSRYGICKFGANCKFDHPT-----MAAPMGVYAYGFSGSASVAPAS 355
>gi|125528863|gb|EAY76977.1| hypothetical protein OsI_04935 [Oryza sativa Indica Group]
Length = 440
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 134/254 (52%), Gaps = 37/254 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ- 59
+R EK C YY++TG CK+G CKFHHP+ NA S GS + PS
Sbjct: 170 LRPSEKECAYYLKTGQCKYGNTCKFHHPE----------LFNAMASSRGSPIYPSVHSSA 219
Query: 60 ------YAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL 112
Y G++ +W+ R ++ S R Q +Y P+IV QG+V P WN+Y G + P+
Sbjct: 220 TAGPPSYTGTMASWAFPRGSFIPSPRWQNPSNYAPMIVP--QGLVQVPSWNSYTGQMMPV 277
Query: 113 SPTSIA----GSNLIYSSRNQGDLGAGAQMHILSASSQN-------------LPERPDQP 155
S + G+ Y + Q D AG Q + S + PERPDQP
Sbjct: 278 SSSESRLQSPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQP 337
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
+C+YYM TG CK+GA CKFHHP+ R + + P+GLP RPG+ +C YS YGICKFG
Sbjct: 338 ECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFG 397
Query: 216 PTCRFDHPYAGYPI 229
C+FDHP P+
Sbjct: 398 ANCKFDHPTMAPPM 411
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P RP + C+ Y
Sbjct: 121 EYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYY 180
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC+F HP
Sbjct: 181 LKTGQCKYGNTCKFHHP 197
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSNYS 207
PER +PDC YY+ TG C++G C+F+HP++R +A ++A G P R GQ C Y
Sbjct: 78 PERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKG--EYPERMGQPECQYYL 135
Query: 208 MYGICKFGPTCRFDHP 223
G CKFGPTC+F HP
Sbjct: 136 KTGTCKFGPTCKFHHP 151
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK--ERIAQS 184
R + + Q++ L P RP + +C YY+ TG CKYG CKFHHP+ +A S
Sbjct: 152 REKAGIAGRVQLNTL-----GYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASS 206
Query: 185 AASNIGP 191
S I P
Sbjct: 207 RGSPIYP 213
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG++C+F+HPQ +L A
Sbjct: 80 RSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIA 114
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+++ S + + P P R G+ C+ Y G+C+FG +CRF+HP
Sbjct: 62 QQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHP 106
>gi|212721330|ref|NP_001132883.1| uncharacterized protein LOC100194377 [Zea mays]
gi|194695656|gb|ACF81912.1| unknown [Zea mays]
Length = 430
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 138/254 (54%), Gaps = 35/254 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTALPLTGNASLGSMGSSVLPS 55
+R +EK C YY++TG CK+ CKFHHP+ PSS G+ + + ++S +S P
Sbjct: 163 LRPNEKECAYYLKTGHCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSS-----ASAGPQ 217
Query: 56 SGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 114
S Y G++P+W+ RA ++ S R Q +Y P+IV QG+V P WN+Y G +
Sbjct: 218 S---YTGTMPSWAFPRASFIPSPRWQSPSNYAPMIVP--QGLVQMPSWNSYTGQL----- 267
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLP-------------ERPDQPDCRYYM 161
G+ Y S QG+ G Q + S + P ERPD+P+C+YYM
Sbjct: 268 -QSPGAQQTYGSSQQGEASTGNQGMLSPYRSSSFPVPQYALQRENVFPERPDEPECQYYM 326
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FD
Sbjct: 327 KTGDCKFGAVCKFHHPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGANCKFD 386
Query: 222 HPYAGYPINYGLSL 235
HP P+ Y
Sbjct: 387 HPTVVAPMVYAYGF 400
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + G P RP + C+ Y
Sbjct: 114 EYPERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRPNEKECAYY 173
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+ TC+F HP
Sbjct: 174 LKTGHCKYANTCKFHHP 190
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 131 DLGAGAQMHILSASSQ---NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAA 186
+ G QM + S ++ + PERP +PDC YY+ TG C++G C+F+HP +R +A ++A
Sbjct: 50 EEGMWQQMAMDSGATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASA 109
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFGPTC+F HP
Sbjct: 110 RMKG--EYPERAGQPECQYYLKTGTCKFGPTCKFHHP 144
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
+ ++ P RP++ +C YY+ TG CKY CKFHHP+
Sbjct: 154 VQLNTSGYPLRPNEKECAYYLKTGHCKYANTCKFHHPE 191
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG++C+F+HP +L A
Sbjct: 73 RPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIA 107
>gi|414879020|tpg|DAA56151.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 430
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 138/254 (54%), Gaps = 35/254 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTALPLTGNASLGSMGSSVLPS 55
+R +EK C YY++TG CK+ CKFHHP+ PSS G+ + + ++S +S P
Sbjct: 163 LRPNEKECAYYLKTGHCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSS-----ASAGPQ 217
Query: 56 SGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 114
S Y G++P+W+ RA ++ S R Q +Y P+IV QG+V WN+Y G +
Sbjct: 218 S---YTGTMPSWAFPRASFIPSPRWQSPSNYAPMIVP--QGLVQMQSWNSYTGQL----- 267
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHI------------LSASSQN-LPERPDQPDCRYYM 161
G+ Y S QG+ G Q + + +N PERPD+P+C+YYM
Sbjct: 268 -QSPGAQQTYGSSQQGEASTGNQGMLSPYRPSSFPVPQYALQRENVFPERPDEPECQYYM 326
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FD
Sbjct: 327 KTGDCKFGAVCKFHHPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGANCKFD 386
Query: 222 HPYAGYPINYGLSL 235
HP P+ Y
Sbjct: 387 HPTVVAPMVYAYGF 400
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + G P RP + C+ Y
Sbjct: 114 EYPERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRPNEKECAYY 173
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+ TC+F HP
Sbjct: 174 LKTGHCKYANTCKFHHP 190
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 131 DLGAGAQMHILSASSQ---NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAA 186
+ G QM + S ++ + PERP +PDC YY+ TG C++G C+F+HP +R +A ++A
Sbjct: 50 EEGMWQQMAMDSGATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASA 109
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFGPTC+F HP
Sbjct: 110 RMKG--EYPERAGQPECQYYLKTGTCKFGPTCKFHHP 144
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
+ ++ P RP++ +C YY+ TG CKY CKFHHP+
Sbjct: 154 VQLNTSGYPLRPNEKECAYYLKTGHCKYANTCKFHHPE 191
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG++C+F+HP +L A
Sbjct: 73 RPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIA 107
>gi|194692174|gb|ACF80171.1| unknown [Zea mays]
gi|414879022|tpg|DAA56153.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 320
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 140/254 (55%), Gaps = 35/254 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTALPLTGNASLGSMGSSVLPS 55
+R +EK C YY++TG CK+ CKFHHP+ PSS G+ + + ++S +S P
Sbjct: 53 LRPNEKECAYYLKTGHCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSS-----ASAGPQ 107
Query: 56 SGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 114
S Y G++P+W+ RA ++ S R Q +Y P+IV QG+V WN+Y G + SP
Sbjct: 108 S---YTGTMPSWAFPRASFIPSPRWQSPSNYAPMIVP--QGLVQMQSWNSYTGQL--QSP 160
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHI------------LSASSQN-LPERPDQPDCRYYM 161
G+ Y S QG+ G Q + + +N PERPD+P+C+YYM
Sbjct: 161 ----GAQQTYGSSQQGEASTGNQGMLSPYRPSSFPVPQYALQRENVFPERPDEPECQYYM 216
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FD
Sbjct: 217 KTGDCKFGAVCKFHHPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGANCKFD 276
Query: 222 HPYAGYPINYGLSL 235
HP P+ Y
Sbjct: 277 HPTVVAPMVYAYGF 290
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + G P RP + C+ Y
Sbjct: 4 EYPERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRPNEKECAYY 63
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+ TC+F HP
Sbjct: 64 LKTGHCKYANTCKFHHP 80
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
+ ++ P RP++ +C YY+ TG CKY CKFHHP+
Sbjct: 44 VQLNTSGYPLRPNEKECAYYLKTGHCKYANTCKFHHPE 81
>gi|194695912|gb|ACF82040.1| unknown [Zea mays]
gi|407232612|gb|AFT82648.1| C3H49 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413951531|gb|AFW84180.1| zinc finger CCCH type domain-containing protein ZFN-like 2 [Zea
mays]
Length = 427
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 139/253 (54%), Gaps = 38/253 (15%)
Query: 4 DEKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTALPLTGNASLGSMGSSVLPSSGL 58
+EK C YY++TG CK+ CKFHHP+ PSS G+ + + ++S +S P S
Sbjct: 162 NEKECAYYLKTGQCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSS-----ASAGPQS-- 214
Query: 59 QYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 117
Y G++ +W+ RA ++ S R Q +Y P++V G+V P WN+Y G + SP
Sbjct: 215 -YTGTMSSWTFPRASFIPSPRWQSPSNYAPMVVP--HGLVQVPSWNSYPGQL--QSP--- 266
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLP-------------ERPDQPDCRYYMNTG 164
G+ Y S QG+ AG Q + S + P ERPD+P+C+YYM TG
Sbjct: 267 -GAQQTYGSSQQGEASAGNQGMLSPYRSSSFPVPQYALQRDNVFPERPDEPECQYYMKTG 325
Query: 165 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
CK+GA CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP
Sbjct: 326 DCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYSRYGICKFGANCKFDHPT 385
Query: 225 AGYPIN---YGLS 234
P+ YG S
Sbjct: 386 MAAPMGVYAYGFS 398
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P P + C+ Y
Sbjct: 110 EYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLLPNEKECAYY 169
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+ TC+F HP
Sbjct: 170 LKTGQCKYANTCKFHHP 186
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 131 DLGAGAQMHILSASSQ---NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAA 186
+ G QM + S ++ + PERP +PDC YY+ TG C++G C+F+HP +R +A ++A
Sbjct: 46 EEGMWQQMAMNSGATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASA 105
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFGPTC+F HP
Sbjct: 106 RMKGE--YPERVGQPECQYYLKTGTCKFGPTCKFHHP 140
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YYM+TG CKFG CKFHHP+
Sbjct: 312 RPDEPECQYYMKTGDCKFGAVCKFHHPR 339
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG++C+F+HP +L A
Sbjct: 69 RPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIA 103
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSS 56
+R E+ C +Y R G CKFG CKF HP A P+ A S +SV P+S
Sbjct: 357 IRPGEELCKFYSRYGICKFGANCKFDHPT-----MAAPMGVYAYGFSGSASVAPAS 407
>gi|226504596|ref|NP_001150019.1| zinc finger CCCH type domain-containing protein ZFN-like 2 [Zea
mays]
gi|195636098|gb|ACG37517.1| zinc finger CCCH type domain-containing protein ZFN-like 2 [Zea
mays]
Length = 427
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 139/253 (54%), Gaps = 38/253 (15%)
Query: 4 DEKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTALPLTGNASLGSMGSSVLPSSGL 58
+EK C YY++TG CK+ CKFHHP+ PSS G+ + + ++S +S P S
Sbjct: 162 NEKECAYYLKTGQCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSS-----ASAGPQS-- 214
Query: 59 QYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 117
Y G++ +W+ RA ++ S R Q +Y P++V G+V P WN+Y G + SP
Sbjct: 215 -YTGTMSSWTFPRASFIPSPRWQSPSNYAPMVVP--HGLVQVPSWNSYPGQL--QSP--- 266
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLP-------------ERPDQPDCRYYMNTG 164
G+ Y S QG+ AG Q + S + P ERPD+P+C+YYM TG
Sbjct: 267 -GAQQTYGSSQQGEASAGNQGMLSPYRSSSFPVPQYALQRDNVFPERPDEPECQYYMKTG 325
Query: 165 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
CK+GA CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP
Sbjct: 326 DCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYSRYGICKFGANCKFDHPT 385
Query: 225 AGYPIN---YGLS 234
P+ YG S
Sbjct: 386 MAAPMGVYAYGFS 398
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P P + C+ Y
Sbjct: 110 EYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLLPNEKECAYY 169
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+ TC+F HP
Sbjct: 170 LKTGQCKYANTCKFHHP 186
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 131 DLGAGAQMHILSASSQ---NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAA 186
+ G QM + S ++ + PERP +PDC YY+ TG C++G C+F+HP +R +A ++A
Sbjct: 46 EEGMWQQMAMNSGATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASA 105
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFGPTC+F HP
Sbjct: 106 RMKGE--YPERVGQPECQYYLKTGTCKFGPTCKFHHP 140
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YYM+TG CKFG CKFHHP+
Sbjct: 312 RPDEPECQYYMKTGDCKFGAVCKFHHPR 339
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG++C+F+HP +L A
Sbjct: 69 RPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIA 103
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSS 56
+R E+ C +Y R G CKFG CKF HP A P+ A S +SV P+S
Sbjct: 357 IRPGEELCKFYSRYGICKFGANCKFDHPT-----MAAPMGVYAYGFSGSASVAPAS 407
>gi|224029745|gb|ACN33948.1| unknown [Zea mays]
gi|413951533|gb|AFW84182.1| hypothetical protein ZEAMMB73_594165 [Zea mays]
Length = 377
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 139/253 (54%), Gaps = 38/253 (15%)
Query: 4 DEKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTALPLTGNASLGSMGSSVLPSSGL 58
+EK C YY++TG CK+ CKFHHP+ PSS G+ + + ++S +S P S
Sbjct: 112 NEKECAYYLKTGQCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSS-----ASAGPQS-- 164
Query: 59 QYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 117
Y G++ +W+ RA ++ S R Q +Y P++V G+V P WN+Y G + SP
Sbjct: 165 -YTGTMSSWTFPRASFIPSPRWQSPSNYAPMVVP--HGLVQVPSWNSYPGQL--QSP--- 216
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLP-------------ERPDQPDCRYYMNTG 164
G+ Y S QG+ AG Q + S + P ERPD+P+C+YYM TG
Sbjct: 217 -GAQQTYGSSQQGEASAGNQGMLSPYRSSSFPVPQYALQRDNVFPERPDEPECQYYMKTG 275
Query: 165 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
CK+GA CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP
Sbjct: 276 DCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYSRYGICKFGANCKFDHPT 335
Query: 225 AGYPIN---YGLS 234
P+ YG S
Sbjct: 336 MAAPMGVYAYGFS 348
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P P + C+ Y
Sbjct: 60 EYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLLPNEKECAYY 119
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+ TC+F HP
Sbjct: 120 LKTGQCKYANTCKFHHP 136
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQAICSN 205
+ PERP +PDC YY+ TG C++G C+F+HP +R +A ++A G P R GQ C
Sbjct: 15 SYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASARMKGE--YPERVGQPECQY 72
Query: 206 YSMYGICKFGPTCRFDHP 223
Y G CKFGPTC+F HP
Sbjct: 73 YLKTGTCKFGPTCKFHHP 90
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YYM+TG CKFG CKFHHP+
Sbjct: 262 RPDEPECQYYMKTGDCKFGAVCKFHHPR 289
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
++A ++ + + P P RPG+ C+ Y G+C+FG +CRF+HP
Sbjct: 2 KMAMNSGATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHP 45
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG++C+F+HP +L A
Sbjct: 19 RPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIA 53
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSS 56
+R E+ C +Y R G CKFG CKF HP A P+ A S +SV P+S
Sbjct: 307 IRPGEELCKFYSRYGICKFGANCKFDHPT-----MAAPMGVYAYGFSGSASVAPAS 357
>gi|357126500|ref|XP_003564925.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
isoform 1 [Brachypodium distachyon]
Length = 442
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 134/250 (53%), Gaps = 37/250 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ- 59
+R +EK C YY++TG CK+G CKF+HP+ NA S GS + PS
Sbjct: 170 LRLNEKECAYYLKTGQCKYGNTCKFNHPE----------LFNAVASSRGSPIYPSLHTSA 219
Query: 60 ------YAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL 112
YAG++ W+ R ++ S R Q +Y P+IV QG+V P WN+Y G + P+
Sbjct: 220 SAGPHSYAGTISNWTYPRGSFIPSPRWQSPSNYAPMIVQ--QGLVQVPSWNSYPGQMLPV 277
Query: 113 SPTSIA----GSNLIYSSRNQGDLGAGAQMHI------------LSASSQN-LPERPDQP 155
S + G+ Y + QG+ +G Q + + +N PERPDQP
Sbjct: 278 SSSESRLQSPGAQQNYGTYRQGEASSGNQGMLSPYRPSSFPVPQYALQRENVFPERPDQP 337
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
+C YY+ TG CK+GA CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG
Sbjct: 338 ECIYYIKTGDCKFGAVCKFHHPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFG 397
Query: 216 PTCRFDHPYA 225
C+FDHP A
Sbjct: 398 INCKFDHPMA 407
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P R + C+ Y
Sbjct: 121 EYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNTLGYPLRLNEKECAYY 180
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC+F+HP
Sbjct: 181 LKTGQCKYGNTCKFNHP 197
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 131 DLGAGAQMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAA 186
D G +M + S + PERP +PDC YY+ TG C++G C+F+HP +R +A ++A
Sbjct: 57 DEGMWQEMTMSSGAPMQPGPYPERPGEPDCTYYLRTGLCRFGISCRFNHPPDRNLAIASA 116
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFGPTC+F HP
Sbjct: 117 RMKG--EYPERVGQPECQYYLKTGTCKFGPTCKFHHP 151
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG++C+F+HP +L A
Sbjct: 80 RPGEPDCTYYLRTGLCRFGISCRFNHPPDRNLAIA 114
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 35
+R E+ C +Y R G CKFG+ CKF HP S +G
Sbjct: 378 LRPGEELCKFYSRYGICKFGINCKFDHPMASPMGV 412
>gi|449449625|ref|XP_004142565.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Cucumis sativus]
Length = 367
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 157/303 (51%), Gaps = 45/303 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ- 59
+R E C YY+RTG CKFG CKFHHPQP+++ + L G+ ++ S P+ G Q
Sbjct: 107 LRPSETECAYYLRTGQCKFGNTCKFHHPQPTNM--MVSLRGSPIYPTVQS---PTPGQQS 161
Query: 60 YAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
Y G WS RA ++ S R QG SY LI+ QG++ PGWN + +G S++
Sbjct: 162 YPGGSTNWS--RASFIPSPRWQGPSSYASLILP--QGVLSVPGWNAFNDQLG-----SVS 212
Query: 119 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
S +R PERP QP+C++YM TG CK+GA C+FHHP+
Sbjct: 213 SSESPQQTREN-----------------VFPERPGQPECQFYMKTGDCKFGAVCRFHHPR 255
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPL 238
ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N L
Sbjct: 256 ERVLPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFTYN-------L 308
Query: 239 SILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSS 298
S S+ Q + T S T+ + SS+ +A S + + + S SDD +
Sbjct: 309 SAASSANAPVQHLFGTSSGTTALNLSSE-----GLVEAGSAKPRRLSISESREMPSDDEN 363
Query: 299 KVD 301
+
Sbjct: 364 DAE 366
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 64/102 (62%), Gaps = 8/102 (7%)
Query: 137 QMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLG 193
++ I +A + PER QP+C+YY+ TGTCK+GA CKFHHP+++ IA A NI LG
Sbjct: 47 ELAIATARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNI--LG 104
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSL 235
P RP + C+ Y G CKFG TC+F HP P N +SL
Sbjct: 105 YPLRPSETECAYYLRTGQCKFGNTCKFHHP---QPTNMMVSL 143
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 131 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNI 189
+LG+G M S + P RP +PDC YY+ TG C++GA C+F+HP R +A + A
Sbjct: 2 NLGSGEIM-----GSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIATARMK 56
Query: 190 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFG TC+F HP
Sbjct: 57 GE--FPERIGQPECQYYLKTGTCKFGATCKFHHP 88
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
+R E C YY+RTG C+FG C+F+HP L A
Sbjct: 16 VRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIA 51
>gi|307135987|gb|ADN33845.1| nucleic acid binding protein [Cucumis melo subsp. melo]
Length = 367
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 131/232 (56%), Gaps = 33/232 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ- 59
+R E C YY+RTG CKFG CKFHHPQP+++ + L G+ ++ S P+ G Q
Sbjct: 107 LRPSETECAYYLRTGQCKFGNTCKFHHPQPTNM--MVSLRGSPIYPTVQS---PTPGQQS 161
Query: 60 YAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
Y G WS RA ++ S R QG SY LI+ QG++ PGWN + +G S++
Sbjct: 162 YPGGSTNWS--RASFIPSPRWQGPSSYASLILP--QGVLSVPGWNAFNDQLG-----SVS 212
Query: 119 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
S +R PERP QP+C++YM TG CK+GA C+FHHP+
Sbjct: 213 SSESPQQTREN-----------------VFPERPGQPECQFYMKTGDCKFGAVCRFHHPR 255
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 230
ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N
Sbjct: 256 ERVLPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFTYN 307
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 64/102 (62%), Gaps = 8/102 (7%)
Query: 137 QMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLG 193
++ I +A + PER QP+C+YY+ TGTCK+GA CKFHHP+++ IA A NI LG
Sbjct: 47 ELAIATARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNI--LG 104
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSL 235
P RP + C+ Y G CKFG TC+F HP P N +SL
Sbjct: 105 YPLRPSETECAYYLRTGQCKFGNTCKFHHP---QPTNMMVSL 143
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 131 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNI 189
+LG+G M S + P RP +PDC YY+ TG C++GA C+F+HP R +A + A
Sbjct: 2 NLGSGEIM-----GSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIATARMK 56
Query: 190 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFG TC+F HP
Sbjct: 57 GE--FPERIGQPECQYYLKTGTCKFGATCKFHHP 88
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
+R E C YY+RTG C+FG C+F+HP L A
Sbjct: 16 VRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIA 51
>gi|357477237|ref|XP_003608904.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355509959|gb|AES91101.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 573
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 130/234 (55%), Gaps = 25/234 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E+ CPYYMRTGSCKFG C+F+HP P+++G + P +G + GS+
Sbjct: 326 IRLGERECPYYMRTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSV------------ 373
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP-APGWNTYMGNIGPLSPTSIAG 119
SL S Q SSR + PL+ +P+QG+ P WN Y +P ++
Sbjct: 374 --SLRGVSQQPVASWSSRKLNETPFAPLMPTPTQGLAPQTSDWNGYQ------APAYLSE 425
Query: 120 SNLIYSSR---NQGDLGAGAQMHILSAS-SQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+ SS N + MH + PERP +P+C +++ TG CK+ ++CKFH
Sbjct: 426 RIMHPSSTYVMNNPTIDTNVYMHHQKQMPFEVFPERPGEPECSFFIKTGDCKFKSNCKFH 485
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 229
HPK R+A+ N+ GLP RP Q++CS+YS YGICKFGP CRFDHP + P+
Sbjct: 486 HPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACRFDHPESALPL 539
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGLPSR-P 198
S + P RP+ DC +YM TG+CK+G +CKF+HP R Q+ A + P
Sbjct: 225 SDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENA 284
Query: 199 GQAICSNYSMYGICKFGPTCRFDHP-----------YAGYPINYG 232
GQ C Y G CKFG C+++H + G PI G
Sbjct: 285 GQTECKYYQRSGGCKFGKACKYNHSRGFTAPISELNFLGLPIRLG 329
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + + C +YM+TGSCKFG CKF+HP
Sbjct: 233 LRPEAEDCSFYMKTGSCKFGFNCKFNHP 260
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP R + +C YYM TG+CK+G++C+F+HP
Sbjct: 324 LPIRLGERECPYYMRTGSCKFGSNCRFNHP 353
>gi|326503048|dbj|BAJ99149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 383
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 149/285 (52%), Gaps = 41/285 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLP------ 54
+R +E+ C YY++TG CK+G CKF+HP+ NA S GS + P
Sbjct: 111 LRPNERECAYYLKTGQCKYGNTCKFNHPE----------IFNAVASSRGSPIYPPVHTSG 160
Query: 55 SSGLQ-YAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL 112
S+G Y G++ +W+ R ++ S R Q +Y P+IV QG+V P WN+Y G + P+
Sbjct: 161 STGPHSYTGTMASWTYPRGSFIPSPRWQSPSNYTPMIVP--QGLVQVPSWNSYPGQMVPV 218
Query: 113 S-PTSIA---GSNLIYSSRNQGDLGAGAQ------------MHILSASSQN-LPERPDQP 155
S P S G+ Y + QG+ AG Q + + +N PERPDQP
Sbjct: 219 SSPESRLQSPGAQQYYGTSRQGEGSAGNQGMQSPYRSSSFPVPQYALQRENVFPERPDQP 278
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
+C YY+ TG CK+GA CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG
Sbjct: 279 ECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFG 338
Query: 216 PTCRFDHPYAG----YPINYGLSLPPLSILDSSLMNHQAISATHS 256
C+FDHP A Y Y S P + + L+ + SA S
Sbjct: 339 VNCKFDHPMAAPMGVYAYGYSASASPNAPMARRLLESPSGSAYAS 383
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P RP + C+ Y
Sbjct: 62 EYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNALGYPLRPNERECAYY 121
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC+F+HP
Sbjct: 122 LKTGQCKYGNTCKFNHP 138
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 200
++ S P RP +PDC YY+ TG C++G C+F+HP++R A++ + P R GQ
Sbjct: 11 VTMQSGPYPVRPGEPDCTYYLRTGLCRFGMSCRFNHPQDRNTAIASARMK-GEYPERVGQ 69
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C Y G CKFGPTC+F HP
Sbjct: 70 PECQYYLKTGTCKFGPTCKFHHP 92
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + + Q++ L P RP++ +C YY+ TG CKYG CKF+HP+ I + A
Sbjct: 93 REKAGIAGMVQLNAL-----GYPLRPNERECAYYLKTGQCKYGNTCKFNHPE--IFNAVA 145
Query: 187 SNIG 190
S+ G
Sbjct: 146 SSRG 149
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
+R E C YY+RTG C+FG++C+F+HPQ
Sbjct: 20 VRPGEPDCTYYLRTGLCRFGMSCRFNHPQ 48
>gi|225436765|ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
[Vitis vinifera]
gi|296086618|emb|CBI32253.3| unnamed protein product [Vitis vinifera]
Length = 475
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 159/307 (51%), Gaps = 25/307 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YY++TG CKFG+ CKFHHPQP+ GT+LP + ++ S +P+ QY
Sbjct: 138 LRLGEKECSYYLKTGQCKFGITCKFHHPQPA--GTSLPASAPTFYPTVQSPSVPTP-TQY 194
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-----SP 114
G+ +W + R P L S +QG Y P++ P G+VP PGW+ Y + P+ P
Sbjct: 195 GGTSTSWRVPRPPVLPGSYVQGP--YGPVLFPP--GVVPIPGWSPYSTPVSPVLSPGAQP 250
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSAS--------SQNLPERPDQPDCRYYMNTGTC 166
T AGS + AG + S++ Q PERP Q +C+YY+ TG C
Sbjct: 251 TVGAGSVYGVTQLPSTHTLAGPYASLPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDC 310
Query: 167 KYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
K+G+ C++HHP+E + + PLGLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 311 KFGSSCRYHHPREWVVPKTNCVLSPLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLG- 369
Query: 227 YPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDM 286
N S S+ D + + S+ ++ S +S P+++ S S + P
Sbjct: 370 ---NMRYSPSASSLTDMPVAPYPVGSSLATLAPSFSSSDLRPDFISGSKKDSHSTRMPSS 426
Query: 287 KNSTTKN 293
N+T+ +
Sbjct: 427 GNTTSSS 433
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 136 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 195
+ + L + PER +P C++Y+ TGTCK+GA C+FHHP+ + ++ G P
Sbjct: 78 SSVSTLRSGGGEYPERIGEPACQFYLKTGTCKFGASCRFHHPRNGGGSMSHVSLNIYGYP 137
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
R G+ CS Y G CKFG TC+F HP
Sbjct: 138 LRLGEKECSYYLKTGQCKFGITCKFHHP 165
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
+S ++ PERP DC YYM TG C +G+ C+++HP++R + S + G P R G+
Sbjct: 40 SSRESYPERPGVADCVYYMKTGFCGFGSRCRYNHPRDRSSVSTLRSGGGE-YPERIGEPA 98
Query: 203 CSNYSMYGICKFGPTCRFDHPYAG 226
C Y G CKFG +CRF HP G
Sbjct: 99 CQFYLKTGTCKFGASCRFHHPRNG 122
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 133 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
G G+ H+ S + P R + +C YY+ TG CK+G CKFHHP+
Sbjct: 122 GGGSMSHV-SLNIYGYPLRLGEKECSYYLKTGQCKFGITCKFHHPQ 166
>gi|255642812|gb|ACU21592.1| Zinc finger protein [Triticum aestivum]
Length = 435
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 148/285 (51%), Gaps = 41/285 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLP------ 54
+R +E+ C YY++TG CK+G CKF+HP+ S A S GS + P
Sbjct: 163 LRPNERECAYYLKTGQCKYGNTCKFNHPEIFS----------AVASSRGSPIYPPVHNSG 212
Query: 55 SSGLQ-YAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL 112
S+G Y G++ +W+ R ++ S R Q +Y P+IV QG+V P WN+Y G + P+
Sbjct: 213 STGPHSYTGTMASWTYPRGSFIPSPRWQSPSNYTPMIVP--QGLVQVPNWNSYPGQMVPV 270
Query: 113 S-PTSIA---GSNLIYSSRNQGDLGAGAQ-MHILSASS------------QNLPERPDQP 155
S P S G+ Y + QG+ AG Q M SS PERPDQP
Sbjct: 271 SSPESRLQSPGAQQYYGTSRQGEASAGNQGMQSPYRSSSFPAPQYALQRENVFPERPDQP 330
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
+C YY+ TG CK+GA CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG
Sbjct: 331 ECIYYIKTGDCKFGAVCKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFG 390
Query: 216 PTCRFDHPYAG----YPINYGLSLPPLSILDSSLMNHQAISATHS 256
C+FDHP A Y Y S P + + L+ + SA S
Sbjct: 391 VNCKFDHPMAAPMGVYAYGYSASASPNAPMARRLLESPSGSAYAS 435
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P RP + C+ Y
Sbjct: 114 EYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNTLGYPLRPNERECAYY 173
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC+F+HP
Sbjct: 174 LKTGQCKYGNTCKFNHP 190
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 131 DLGAGAQMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS 187
+ G QM + S ++ P RP +PDC YY+ TG C++G C+F+HP++R A++
Sbjct: 50 EEGMWQQMAMSSGATMQSGPYPVRPGEPDCTYYLRTGLCRFGMSCRFNHPQDRNTAIASA 109
Query: 188 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ P R GQ C Y G CKFGPTC+F HP
Sbjct: 110 RMK-GEYPERVGQPECQYYLKTGTCKFGPTCKFHHP 144
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + + Q++ L P RP++ +C YY+ TG CKYG CKF+HP+ I + A
Sbjct: 145 REKAGIAGMVQLNTL-----GYPLRPNERECAYYLKTGQCKYGNTCKFNHPE--IFSAVA 197
Query: 187 SNIG 190
S+ G
Sbjct: 198 SSRG 201
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
+R E C YY+RTG C+FG++C+F+HPQ
Sbjct: 72 VRPGEPDCTYYLRTGLCRFGMSCRFNHPQ 100
>gi|358348997|ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355504462|gb|AES85665.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 511
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 130/246 (52%), Gaps = 40/246 (16%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK CPYYMRTGSCKFG CKF+HP P+S+G G S G+ S
Sbjct: 266 IRLGEKECPYYMRTGSCKFGANCKFNHPDPTSVG------GYDSTAGYGNGSTTSLQDVS 319
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP-APGWNTYMG-------NIGPL 112
S P WS R + T ++P+I+SP+ G P + WN Y ++ P
Sbjct: 320 QSSTPPWSSTR------KFNETAPFVPIIISPTPGASPRSSDWNGYQAPFYLSERSMHPP 373
Query: 113 SPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS-SQNLPERPDQPDCRYYMNTGTCKYGAD 171
SP ++ N + A MH + + PERP +P+C +++ TG CK+ +
Sbjct: 374 SPYAV----------NNPAMEMNAYMHRHKHTPVEEFPERPGEPECSFFLKTGDCKFKSH 423
Query: 172 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 231
CKFHHPK RI + N+ GLP RPGQ +C++YS YGICKFGP C++DHP
Sbjct: 424 CKFHHPKNRITKLPPCNLSDKGLPLRPGQNVCTHYSRYGICKFGPACKYDHP-------- 475
Query: 232 GLSLPP 237
++LPP
Sbjct: 476 -INLPP 480
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 132 LGAGAQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 190
LG Q+ A ++ L ER Q +C+YY +G CK+G DCKF H + + + +
Sbjct: 201 LGRRNQVFRERAGERDELEERSSQTECKYYSRSGGCKFGKDCKFDHTRGKFSADQVLELN 260
Query: 191 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
LGLP R G+ C Y G CKFG C+F+HP
Sbjct: 261 FLGLPIRLGEKECPYYMRTGSCKFGANCKFNHP 293
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-LPSRPGQAIC 203
++ P RP+ DC +Y+ TGTCK+G +CKF+HP R Q G L R Q C
Sbjct: 168 AEQYPLRPEAEDCSFYLKTGTCKFGFNCKFNHPLGRRNQVFRERAGERDELEERSSQTEC 227
Query: 204 SNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
YS G CKFG C+FDH + + L L L +
Sbjct: 228 KYYSRSGGCKFGKDCKFDHTRGKFSADQVLELNFLGL 264
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + + C +Y++TG+CKFG CKF+HP
Sbjct: 173 LRPEAEDCSFYLKTGTCKFGFNCKFNHP 200
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 20/37 (54%)
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
SN G P RP CS Y G CKFG C+F+HP
Sbjct: 164 SNGGAEQYPLRPEAEDCSFYLKTGTCKFGFNCKFNHP 200
>gi|255540399|ref|XP_002511264.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223550379|gb|EEF51866.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 495
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 129/224 (57%), Gaps = 16/224 (7%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E+ CPYYMR GSCK+G C+F+HP P+++G + PL + + GS+ L +S LQ
Sbjct: 243 IRPGERECPYYMRNGSCKYGANCRFNHPDPTTVGGSDPL----AFSNGGSASLQNS-LQ- 296
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGI-VPAPGWNTYMGNIGPLSPTSIAG 119
++ +WS +P L T S+M ++ SP+QG+ P WN Y PL S+
Sbjct: 297 -SNIASWS---SP---GGLNETPSFMSIMFSPTQGVPSQNPEWNGYQVCYFPLYERSMHQ 349
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
S D A + + PERP QP+C Y+M TG CK+ ++CK+HHPK
Sbjct: 350 PPAYVISNPATDTNVYAHQQQIQV--EEFPERPGQPECSYFMKTGDCKFKSNCKYHHPKN 407
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
I++S + GLP RPGQ ICS YS YGICKFGP C+FDHP
Sbjct: 408 HISKSPPCVLSDKGLPLRPGQNICSYYSRYGICKFGPACKFDHP 451
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS-RPGQAICSNYS 207
P RP+ DC YYM TGTCK+G++CKF+HP +R Q + + + RPGQ C Y
Sbjct: 142 PVRPEAEDCSYYMKTGTCKFGSNCKFNHPVKRKMQVSKEKVKEREEATDRPGQTECKYYL 201
Query: 208 MYGICKFGPTCRFDHPYA 225
G CK+G CR++H A
Sbjct: 202 RTGGCKYGKACRYNHSRA 219
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKER-------IAQSAASNIGPLGLPSRPGQAI 202
+RP Q +C+YY+ TG CKYG C+++H + + A A ++ LGLP RPG+
Sbjct: 190 DRPGQTECKYYLRTGGCKYGKACRYNHSRAKPLLLQAKTAVFPALDLNFLGLPIRPGERE 249
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C Y G CK+G CRF+HP
Sbjct: 250 CPYYMRNGSCKYGANCRFNHP 270
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 61/183 (33%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS------MGSSVLP 54
+R + + C YYM+TG+CKFG CKF+HP + + + L
Sbjct: 143 VRPEAEDCSYYMKTGTCKFGSNCKFNHPVKRKMQVSKEKVKEREEATDRPGQTECKYYLR 202
Query: 55 SSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 114
+ G +Y G ++ RA PL++ + PA N ++G
Sbjct: 203 TGGCKY-GKACRYNHSRA-------------KPLLLQAKTAVFPALDLN-FLG------- 240
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
LP RP + +C YYM G+CKYGA+C+F
Sbjct: 241 ---------------------------------LPIRPGERECPYYMRNGSCKYGANCRF 267
Query: 175 HHP 177
+HP
Sbjct: 268 NHP 270
>gi|297816042|ref|XP_002875904.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321742|gb|EFH52163.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 447
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 126/233 (54%), Gaps = 30/233 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E CPYYMR GSCKFG CKF+HP P+++G L+ + + G + P S Q
Sbjct: 203 IRPGEVECPYYMRNGSCKFGAECKFNHPDPTTIGGTDSLSFHGNNGVSIGTFSPKSAFQ- 261
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGI-VPAPGWNTYMGNI-----GPLSP 114
S +W+ R + GT ++P+++S + G+ P WN Y ++ G SP
Sbjct: 262 -ASSTSWTSPR------HVNGTSPFIPVMLSQTHGVPSQTPEWNGYQASVYSSERGLFSP 314
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQM-----HILSASSQNLPERPDQPDCRYYMNTGTCKYG 169
++ N +L A M H + A + PERPDQPDC YYM TG CK+
Sbjct: 315 STTYLMN---------NLSAETSMLSQYRHQMPA--EEFPERPDQPDCSYYMKTGDCKFK 363
Query: 170 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
+CK+HHPK R+ + + GLP RP Q IC+ YS YGICKFGP CRFDH
Sbjct: 364 FNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDH 416
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%)
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
DC+YY TG CKYG C+F+H + ++A + LGLP RPG+ C Y G CKFG
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTLPKSCLASAPELNFLGLPIRPGEVECPYYMRNGSCKFG 222
Query: 216 PTCRFDHP 223
C+F+HP
Sbjct: 223 AECKFNHP 230
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 43/82 (52%), Gaps = 14/82 (17%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI--------GPLGLPSRPGQ 200
P RP DC +YM TG+CK+G+ CKF+HP R Q A N G LGL
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKIQIARDNKVREKEEDGGKLGL------ 161
Query: 201 AICSNYSMYGICKFGPTCRFDH 222
C Y G CK+G TCRF+H
Sbjct: 162 IDCKYYFRTGGCKYGETCRFNH 183
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP + +C YYM G+CK+GA+CKF+HP
Sbjct: 201 LPIRPGEVECPYYMRNGSCKFGAECKFNHP 230
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
+R + C +YMRTGSCKFG +CKF+HP + A
Sbjct: 109 VRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKIQIA 144
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 195 PSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
P RPG CS Y G CKFG +C+F+HP A
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPLA 138
>gi|357477239|ref|XP_003608905.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355509960|gb|AES91102.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 307
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/234 (39%), Positives = 130/234 (55%), Gaps = 25/234 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E+ CPYYMRTGSCKFG C+F+HP P+++G + P +G + GS+
Sbjct: 60 IRLGERECPYYMRTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSV------------ 107
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP-APGWNTYMGNIGPLSPTSIAG 119
SL S Q SSR + PL+ +P+QG+ P WN Y +P ++
Sbjct: 108 --SLRGVSQQPVASWSSRKLNETPFAPLMPTPTQGLAPQTSDWNGYQ------APAYLSE 159
Query: 120 SNLIYSSR---NQGDLGAGAQMHILSAS-SQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+ SS N + MH + PERP +P+C +++ TG CK+ ++CKFH
Sbjct: 160 RIMHPSSTYVMNNPTIDTNVYMHHQKQMPFEVFPERPGEPECSFFIKTGDCKFKSNCKFH 219
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 229
HPK R+A+ N+ GLP RP Q++CS+YS YGICKFGP CRFDHP + P+
Sbjct: 220 HPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACRFDHPESALPL 273
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 209
E Q +C+YY +G CK+G CK++H + A + N LGLP R G+ C Y
Sbjct: 16 ENAGQTECKYYQRSGGCKFGKACKYNHSRGFTAPISELNF--LGLPIRLGERECPYYMRT 73
Query: 210 GICKFGPTCRFDHP 223
G CKFG CRF+HP
Sbjct: 74 GSCKFGSNCRFNHP 87
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP R + +C YYM TG+CK+G++C+F+HP
Sbjct: 58 LPIRLGERECPYYMRTGSCKFGSNCRFNHP 87
>gi|357126502|ref|XP_003564926.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
isoform 2 [Brachypodium distachyon]
Length = 432
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 131/246 (53%), Gaps = 39/246 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ- 59
+R +EK C YY++TG CK+G CKF+HP+ NA S GS + PS
Sbjct: 170 LRLNEKECAYYLKTGQCKYGNTCKFNHPE----------LFNAVASSRGSPIYPSLHTSA 219
Query: 60 ------YAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL 112
YAG++ W+ R ++ S R Q +Y P+IV QG+V P WN+Y +
Sbjct: 220 SAGPHSYAGTISNWTYPRGSFIPSPRWQSPSNYAPMIVQ--QGLVQVPSWNSYPSRL--Q 275
Query: 113 SPTSIAGSNLIYSSRNQGDLGAGAQMHI------------LSASSQN-LPERPDQPDCRY 159
SP G+ Y + QG+ +G Q + + +N PERPDQP+C Y
Sbjct: 276 SP----GAQQNYGTYRQGEASSGNQGMLSPYRPSSFPVPQYALQRENVFPERPDQPECIY 331
Query: 160 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCR 219
Y+ TG CK+GA CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+
Sbjct: 332 YIKTGDCKFGAVCKFHHPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGINCK 391
Query: 220 FDHPYA 225
FDHP A
Sbjct: 392 FDHPMA 397
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 138 MHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 196
+ I SA + PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + LG P
Sbjct: 111 LAIASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNTLGYPL 170
Query: 197 RPGQAICSNYSMYGICKFGPTCRFDHP 223
R + C+ Y G CK+G TC+F+HP
Sbjct: 171 RLNEKECAYYLKTGQCKYGNTCKFNHP 197
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 131 DLGAGAQMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAA 186
D G +M + S + PERP +PDC YY+ TG C++G C+F+HP +R +A ++A
Sbjct: 57 DEGMWQEMTMSSGAPMQPGPYPERPGEPDCTYYLRTGLCRFGISCRFNHPPDRNLAIASA 116
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFGPTC+F HP
Sbjct: 117 RMKG--EYPERVGQPECQYYLKTGTCKFGPTCKFHHP 151
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG++C+F+HP +L A
Sbjct: 80 RPGEPDCTYYLRTGLCRFGISCRFNHPPDRNLAIA 114
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 35
+R E+ C +Y R G CKFG+ CKF HP S +G
Sbjct: 368 LRPGEELCKFYSRYGICKFGINCKFDHPMASPMGV 402
>gi|359476781|ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Vitis vinifera]
Length = 393
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 126/236 (53%), Gaps = 40/236 (16%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R DE C YY+RTG CKFG CKFHHPQPSS+ + L G+ S+ S P Y
Sbjct: 138 LRPDEIDCAYYLRTGQCKFGSTCKFHHPQPSSM--MVSLRGSPVYPSVPSPTTPGQ-QSY 194
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA-G 119
AG + W L RA + +P+P W +P+S A G
Sbjct: 195 AGGITNWPLSRASF----------------------IPSPRWQ---------APSSYATG 223
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
S +S G + G + +N+ PERP QP+C++YM TG CK+GA C+FHHP+
Sbjct: 224 SQGTFSPYRSGSVPIG----FYALQRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPR 279
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLS 234
ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N S
Sbjct: 280 ERLIPTPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLSAS 335
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP+C+YY+ TGTCK+GA CKFHHP+++ + ++ LG P RP + C+ Y
Sbjct: 89 EFPERMGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPDEIDCAYY 148
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 149 LRTGQCKFGSTCKFHHP 165
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 137 QMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPL 192
QM++ S+ + PERP +PDC YY+ TG C++G C+F+HP R +A + A G
Sbjct: 31 QMNLRSSETMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIATARMKGE- 89
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P R GQ C Y G CKFG TC+F HP
Sbjct: 90 -FPERMGQPECQYYLKTGTCKFGATCKFHHP 119
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
R++ + ++IL P RPD+ DC YY+ TG CK+G+ CKFHHP+
Sbjct: 120 RDKAGIAGRVSLNIL-----GYPLRPDEIDCAYYLRTGQCKFGSTCKFHHPQ 166
>gi|147818474|emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]
Length = 1388
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 131/235 (55%), Gaps = 21/235 (8%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAG 62
Q EK C YY++TG CKFG+ CKFHHPQP+ GT+LP + ++ S +P+ QY G
Sbjct: 178 QGEKECSYYLKTGQCKFGITCKFHHPQPA--GTSLPASAPTFYPTVQSPSVPTP-TQYGG 234
Query: 63 SLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-----SPTS 116
+ +W + R P L S +QG Y P++ P G+VP PGW+ Y + P+ PT
Sbjct: 235 TSTSWRVPRPPVLPGSYVQG--PYGPVLFPP--GVVPIPGWSPYSTPVSPVLSPGAQPTV 290
Query: 117 IAGSNLIYSSRNQGDLGAGAQMHILSAS--------SQNLPERPDQPDCRYYMNTGTCKY 168
AGS + AG + S++ Q PERP Q +C+YY+ TG CK+
Sbjct: 291 GAGSVYGVTQLPSTHTLAGPYASLPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDCKF 350
Query: 169 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G+ C++HHP+E + + PLGLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 351 GSSCRYHHPREWVVPKTNCVLSPLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHP 405
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 8/127 (6%)
Query: 102 WNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYM 161
W+ G + P I N + S R +G + + + +S ++ PERP DC YYM
Sbjct: 80 WSCTGGLRRGMGPNRILRWNGVRSGRCRG---SKSMWRLGLSSRESYPERPGVADCVYYM 136
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIG-----PLGLPSRPGQAICSNYSMYGICKFGP 216
TG C +G+ C+++HP++R + S + G +G P+ G+ CS Y G CKFG
Sbjct: 137 KTGFCGFGSRCRYNHPRDRSSVSTLRSGGGEYPERIGEPACQGEKECSYYLKTGQCKFGI 196
Query: 217 TCRFDHP 223
TC+F HP
Sbjct: 197 TCKFHHP 203
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R ++ C YY+RTG CKFG +C++HHP+
Sbjct: 333 RPGQQECQYYLRTGDCKFGSSCRYHHPR 360
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + C +Y++ G CKFG CKF HP
Sbjct: 378 LRPGVQPCTFYLQNGYCKFGSTCKFDHP 405
>gi|356563166|ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 501
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 130/233 (55%), Gaps = 19/233 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA--LPLTGNASLGSMGSSVLPSSGL 58
+R E+ CPYYMRTGSCKFG CKF+HP P+++G P +G + GS+ + +
Sbjct: 247 IRLGERECPYYMRTGSCKFGANCKFNHPDPTAVGGVGGDPASGYGNGGSISLQGVSQT-- 304
Query: 59 QYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGI-VPAPGWNTYMGNIGPLSPTSI 117
S+P+WS R L + ++P+++SP+QG+ + WN Y ++
Sbjct: 305 ----SVPSWSSPRT------LNESSPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERNMH 354
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSAS-SQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
S + N + MH PERP +P+C Y++ TG CK+ ++CKF+H
Sbjct: 355 PPSTFVM---NNPAIDTNVYMHHQKQMPVDEFPERPGEPECSYFLKTGDCKFKSNCKFNH 411
Query: 177 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 229
PK R+A+ N+ GLP RP Q++CS+YS YGICKFGP C+FDHP P+
Sbjct: 412 PKNRVARLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPV 464
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL-GLPSRPGQ 200
S +Q+ P RP+ DC +Y+ TG CK+G +CKF+HP R +Q+ G R G
Sbjct: 144 SGLAQHYPLRPEAEDCAFYIKTGNCKFGFNCKFNHPIRRKSQAVKEKAGEREETTERSGM 203
Query: 201 AICSNYSMYGICKFGPTCRFDH 222
C Y G CKFG +C+++H
Sbjct: 204 TECKYYQRSGGCKFGKSCKYNH 225
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS--NIGPLGLPSRPG 199
+ + ER +C+YY +G CK+G CK++H + +I+ + A + LGLP R G
Sbjct: 191 AGEREETTERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRLG 250
Query: 200 QAICSNYSMYGICKFGPTCRFDHP 223
+ C Y G CKFG C+F+HP
Sbjct: 251 ERECPYYMRTGSCKFGANCKFNHP 274
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 140 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
+L + LP R + +C YYM TG+CK+GA+CKF+HP
Sbjct: 237 LLELNFLGLPIRLGERECPYYMRTGSCKFGANCKFNHP 274
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + + C +Y++TG+CKFG CKF+HP
Sbjct: 152 LRPEAEDCAFYIKTGNCKFGFNCKFNHP 179
>gi|359491687|ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
[Vitis vinifera]
Length = 481
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 130/235 (55%), Gaps = 18/235 (7%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK CPYYMRTGSCK+G C+F+HP P++ G +G + GS +P G
Sbjct: 223 IRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGS-----VPLQGASQ 277
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPA-PGWNTYMGNIGPLSPTSIAG 119
+ ++ +WS RA L ++P++ SP+QG+ P P WN Y + L +
Sbjct: 278 S-NMASWSSPRA------LNEPAPFVPIMFSPTQGVPPPNPEWNGYQVFMLLLKRSMHPP 330
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
+ ++ G + ++ PERP QP+C Y++ TG CK+ A CK+HHPK
Sbjct: 331 PAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKFRAACKYHHPKN 390
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLS 234
RI +S + GLP RP Q IC++Y+ YGICKFGP C+FDH P+NYG S
Sbjct: 391 RIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDH-----PVNYGNS 440
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHP---KERIAQSAASNIGPLGLPSRPGQAICSN 205
P RPD DC +Y+ TGTCK+G++CKF+HP K ++A+ P RPGQ C
Sbjct: 127 PVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKY 186
Query: 206 YSMYGICKFGPTCRFDHPYA 225
Y G CKFG CR++H A
Sbjct: 187 YLRTGGCKFGKACRYNHTKA 206
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 207
PERP Q +C+YY+ TG CK+G C+++H K + + + LGLP R G+ C Y
Sbjct: 175 FPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYM 234
Query: 208 MYGICKFGPTCRFDHP 223
G CK+G CRF+HP
Sbjct: 235 RTGSCKYGANCRFNHP 250
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R D C +Y+RTG+CKFG CKF+HP
Sbjct: 128 VRPDAVDCSFYLRTGTCKFGSNCKFNHP 155
>gi|15228379|ref|NP_190414.1| zinc finger CCCH domain-containing protein 43 [Arabidopsis
thaliana]
gi|62901491|sp|Q9STM4.1|C3H43_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 43;
Short=AtC3H43; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 6
gi|4678344|emb|CAB41154.1| putative protein [Arabidopsis thaliana]
gi|194272236|gb|ACF37203.1| At3g48440 [Arabidopsis thaliana]
gi|332644896|gb|AEE78417.1| zinc finger CCCH domain-containing protein 43 [Arabidopsis
thaliana]
Length = 448
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 126/228 (55%), Gaps = 19/228 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E CPYYMR GSCK+G CKF+HP P+++G + + G + P + Q
Sbjct: 203 LRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQ- 261
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPA-PGWNTYMGNI-----GPLSP 114
S +WS R + GT ++P+++S + G+ P WN Y ++ G SP
Sbjct: 262 -ASSTSWSSPR------HVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSP 314
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
++ + L+ +S + + H + A + PERPDQP+C YYM TG CK+ +CK+
Sbjct: 315 ST---TYLMNNSSAETSMLLSQYRHQMPA--EEFPERPDQPECSYYMKTGDCKFKFNCKY 369
Query: 175 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
HHPK R+ + + GLP RP Q IC+ YS YGICKFGP CRFDH
Sbjct: 370 HHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDH 417
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
DC+YY TG CKYG C+F+H + ++A + LGLP RPG+ C Y G CK+G
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYG 222
Query: 216 PTCRFDHP 223
C+F+HP
Sbjct: 223 AECKFNHP 230
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 47/88 (53%), Gaps = 15/88 (17%)
Query: 144 SSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI--------GPLGL 194
S+N+ P RP DC +YM TG+CK+G+ CKF+HP R Q A N G LGL
Sbjct: 102 ESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGL 161
Query: 195 PSRPGQAICSNYSMYGICKFGPTCRFDH 222
C Y G CK+G TCRF+H
Sbjct: 162 ------IDCKYYFRTGGCKYGETCRFNH 183
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP + +C YYM G+CKYGA+CKF+HP
Sbjct: 201 LPLRPGEVECPYYMRNGSCKYGAECKFNHP 230
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + C +YMRTGSCKFG +CKF+HP
Sbjct: 109 VRPGAEDCSFYMRTGSCKFGSSCKFNHP 136
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 195 PSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
P RPG CS Y G CKFG +C+F+HP A
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPLA 138
>gi|225456787|ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera]
gi|297733636|emb|CBI14883.3| unnamed protein product [Vitis vinifera]
Length = 484
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 132/243 (54%), Gaps = 31/243 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK CPYYMRTGSCK+G C+F+HP P++ G +G + GS +P G
Sbjct: 223 IRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGS-----VPLQGASQ 277
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPA-PGWNTYMGNIGPLS------ 113
+ ++ +WS RA L ++P++ SP+QG+ P P WN Y + P
Sbjct: 278 S-NMASWSSPRA------LNEPAPFVPIMFSPTQGVPPPNPEWNGYQAPLYPPPPPERSM 330
Query: 114 --PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 171
P + +N + G Q I ++ PERP QP+C Y++ TG CK+ A
Sbjct: 331 HPPPAFVINNTATDANVYGHHQQQQQSLI-----EDFPERPGQPECSYFLKTGDCKFRAA 385
Query: 172 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 231
CK+HHPK RI +S + GLP RP Q IC++Y+ YGICKFGP C+FDH P+NY
Sbjct: 386 CKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDH-----PVNY 440
Query: 232 GLS 234
G S
Sbjct: 441 GNS 443
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHP---KERIAQSAASNIGPLGLPSRPGQAICSN 205
P RPD DC +Y+ TGTCK+G++CKF+HP K ++A+ P RPGQ C
Sbjct: 127 PVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKY 186
Query: 206 YSMYGICKFGPTCRFDHPYA 225
Y G CKFG CR++H A
Sbjct: 187 YLRTGGCKFGKACRYNHTKA 206
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 207
PERP Q +C+YY+ TG CK+G C+++H K + + + LGLP R G+ C Y
Sbjct: 175 FPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNFLGLPIRMGEKECPYYM 234
Query: 208 MYGICKFGPTCRFDHP 223
G CK+G CRF+HP
Sbjct: 235 RTGSCKYGANCRFNHP 250
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R D C +Y+RTG+CKFG CKF+HP
Sbjct: 128 VRPDAVDCSFYLRTGTCKFGSNCKFNHP 155
>gi|218186710|gb|EEC69137.1| hypothetical protein OsI_38063 [Oryza sativa Indica Group]
Length = 395
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/268 (37%), Positives = 137/268 (51%), Gaps = 45/268 (16%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R + C YY++TG+CKFG CKFHHP+ + L L +G + P+ + A
Sbjct: 111 RVGQPECQYYLKTGTCKFGATCKFHHPREKAA-----LANRVQLNVLGYPMRPNE-KECA 164
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP------- 114
L T + A + Y +IV QG+V PGWN Y +G SP
Sbjct: 165 YYLRTGQCKFA---------STCYAQVIVP--QGLVQVPGWNPYAAQMGSSSPDDQQRTP 213
Query: 115 ------------TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYM 161
T G + +Y S G + G + + +N+ PERPDQP+C++YM
Sbjct: 214 VTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVG----VYTVQGENIFPERPDQPECQFYM 269
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA CKFHHPKER+ + + LGLP RPG+ +C+ YS YGICKFGP C+FD
Sbjct: 270 KTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFD 329
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQ 249
HP + YG + P D S M++Q
Sbjct: 330 HPMG--TLMYGSATSPTG--DVSSMHYQ 353
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
P R QP+C+YY+ TGTCK+GA CKFHHP+E+ A + + LG P RP + C+ Y
Sbjct: 107 EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKECAYY 166
Query: 207 SMYGICKFGPTC 218
G CKF TC
Sbjct: 167 LRTGQCKFASTC 178
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 129 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 188
Q LG G M S PER +PDC YYM TG C++G CKF+HP R AA+
Sbjct: 49 QMTLGGGESM-----ESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAAR 103
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ P R GQ C Y G CKFG TC+F HP
Sbjct: 104 MNGE-YPYRVGQPECQYYLKTGTCKFGATCKFHHP 137
>gi|4928917|gb|AAD33769.1|AF138743_1 zinc finger protein 1 [Arabidopsis thaliana]
Length = 424
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 143/285 (50%), Gaps = 45/285 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C Y++RTG CKFG CKF+HPQP +P +G S
Sbjct: 130 LRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSY--------------- 174
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
WS RA +++S R Q SY LI+ QG+VP GWN Y G +G +SP+ G
Sbjct: 175 -----PWS--RASFIASPRWQDPSSYASLIMP--QGVVPVQGWNPYSGQLGSVSPSG-TG 224
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQN------------------LPERPDQPDCRYYM 161
++ Y + Q + S S N PERP QP+C++YM
Sbjct: 225 NDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYM 284
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+G CKFHHP++R A + +GLP RPG+ +C Y+ YGICKFGP+C+FD
Sbjct: 285 KTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFD 344
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSK 266
HP + + S ++++S + +S + + + + +S K
Sbjct: 345 HPMRVFTYDNTASETD-EVVETSTGKSRRLSVSETRQAATTSSGK 388
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PER P+C YY+ TGTCK+G CKFHHP+ + + ++ LG P R + C+ +
Sbjct: 83 PERIGHPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLR 142
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F+HP
Sbjct: 143 TGHCKFGGTCKFNHP 157
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PERP +PDC YY+ TG C++G+ C+ +HP++R A + + P R G C Y
Sbjct: 38 PERPGEPDCSYYIRTGLCRFGSTCRVNHPRDRELVIATARMRG-EYPERIGHPECEYYLK 96
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 97 TGTCKFGVTCKFHHP 111
>gi|18396338|ref|NP_566183.1| zinc finger CCCH domain-containing protein 33 [Arabidopsis
thaliana]
gi|62901378|sp|Q8GXX7.1|C3H33_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 33;
Short=AtC3H33; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN1
gi|26451016|dbj|BAC42614.1| putative zinc finger protein 1 zfn1 [Arabidopsis thaliana]
gi|109134113|gb|ABG25055.1| At3g02830 [Arabidopsis thaliana]
gi|332640343|gb|AEE73864.1| zinc finger CCCH domain-containing protein 33 [Arabidopsis
thaliana]
Length = 397
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 143/285 (50%), Gaps = 45/285 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C Y++RTG CKFG CKF+HPQP +P +G S
Sbjct: 130 LRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSY--------------- 174
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
WS RA +++S R Q SY LI+ QG+VP GWN Y G +G +SP+ G
Sbjct: 175 -----PWS--RASFIASPRWQDPSSYASLIMP--QGVVPVQGWNPYSGQLGSVSPSG-TG 224
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQN------------------LPERPDQPDCRYYM 161
++ Y + Q + S S N PERP QP+C++YM
Sbjct: 225 NDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYM 284
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+G CKFHHP++R A + +GLP RPG+ +C Y+ YGICKFGP+C+FD
Sbjct: 285 KTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFD 344
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSK 266
HP + + S ++++S + +S + + + + +S K
Sbjct: 345 HPMRVFTYDNTASETD-EVVETSTGKSRRLSVSETRQAATTSSGK 388
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PER QP+C YY+ TGTCK+G CKFHHP+ + + ++ LG P R + C+ +
Sbjct: 83 PERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLR 142
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F+HP
Sbjct: 143 TGHCKFGGTCKFNHP 157
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PERP +PDC YY+ TG C++G+ C+F+HP++R A + + P R GQ C Y
Sbjct: 38 PERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRG-EYPERIGQPECEYYLK 96
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 97 TGTCKFGVTCKFHHP 111
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG C+F+HP+ L A
Sbjct: 40 RPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIA 74
>gi|6728979|gb|AAF26977.1|AC018363_22 zinc finger protein 1 (zfn1) [Arabidopsis thaliana]
Length = 377
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 143/285 (50%), Gaps = 45/285 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C Y++RTG CKFG CKF+HPQP +P +G S
Sbjct: 110 LRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSY--------------- 154
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
WS RA +++S R Q SY LI+ QG+VP GWN Y G +G +SP+ G
Sbjct: 155 -----PWS--RASFIASPRWQDPSSYASLIMP--QGVVPVQGWNPYSGQLGSVSPSG-TG 204
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQN------------------LPERPDQPDCRYYM 161
++ Y + Q + S S N PERP QP+C++YM
Sbjct: 205 NDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYM 264
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+G CKFHHP++R A + +GLP RPG+ +C Y+ YGICKFGP+C+FD
Sbjct: 265 KTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFD 324
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSK 266
HP + + S ++++S + +S + + + + +S K
Sbjct: 325 HPMRVFTYDNTASETD-EVVETSTGKSRRLSVSETRQAATTSSGK 368
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PER QP+C YY+ TGTCK+G CKFHHP+ + + ++ LG P R + C+ +
Sbjct: 63 PERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLR 122
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F+HP
Sbjct: 123 TGHCKFGGTCKFNHP 137
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PERP +PDC YY+ TG C++G+ C+F+HP++R A + + P R GQ C Y
Sbjct: 18 PERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRG-EYPERIGQPECEYYLK 76
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 77 TGTCKFGVTCKFHHP 91
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG C+F+HP+ L A
Sbjct: 20 RPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIA 54
>gi|297828742|ref|XP_002882253.1| hypothetical protein ARALYDRAFT_477525 [Arabidopsis lyrata subsp.
lyrata]
gi|297328093|gb|EFH58512.1| hypothetical protein ARALYDRAFT_477525 [Arabidopsis lyrata subsp.
lyrata]
Length = 397
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 125/242 (51%), Gaps = 44/242 (18%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C Y++RTG CKFG CKF+HPQP +P +G S
Sbjct: 130 LRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSY--------------- 174
Query: 61 AGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
WS RA +++S R Q SY LI+ QG+VP GWN Y G +G +SP+ G
Sbjct: 175 -----PWS--RASFIASPRWQDPSSYASLIMP--QGVVPVQGWNPYSGQLGSVSPSG-TG 224
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQN------------------LPERPDQPDCRYYM 161
++ Y + Q + S S N PERP QP+C++YM
Sbjct: 225 NDQNYRNLQQNETIESGSQSQGSFSGFNPGSSVPIGGYYALPRENVFPERPGQPECQFYM 284
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+G CKFHHP++R A + +GLP RPG+ +C Y+ YGICKFGP+C+FD
Sbjct: 285 KTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFD 344
Query: 222 HP 223
HP
Sbjct: 345 HP 346
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PER QP+C YY+ TGTCK+G CKFHHP+ + + ++ LG P R + C+ +
Sbjct: 83 PERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLR 142
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F+HP
Sbjct: 143 TGHCKFGGTCKFNHP 157
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PERP +PDC YY+ TG C++G+ C+F+HP++R A + + P R GQ C Y
Sbjct: 38 PERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRG-EYPERIGQPECEYYLK 96
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 97 TGTCKFGVTCKFHHP 111
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA 182
SS LP RP +P C +Y G CK+G CKF HP A
Sbjct: 313 SSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFA 351
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG C+F+HP+ L A
Sbjct: 40 RPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIA 74
>gi|30690809|ref|NP_182306.2| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|145331439|ref|NP_001078078.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|62901446|sp|Q84W91.2|C3H32_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 32;
Short=AtC3H32; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 1
gi|134031914|gb|ABO45694.1| At2g47850 [Arabidopsis thaliana]
gi|330255803|gb|AEC10897.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|330255805|gb|AEC10899.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
Length = 468
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 127/234 (54%), Gaps = 18/234 (7%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R+ + C YY++TG CKFG+ CKFHHPQP+ P S++P QY
Sbjct: 135 VREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPD---QY 191
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSP----- 114
G + + R S +QG +Y P++++P G+VP PGW+ Y + P LSP
Sbjct: 192 GGPSSSLRVARTLLPGSYMQG--AYGPMLLTP--GVVPIPGWSPYSAPVSPALSPGAQHA 247
Query: 115 ---TSIAGSNLIYSSRNQ--GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 169
TS+ G + S+ G + + + Q PERP +P+C+YY+ TG CK+G
Sbjct: 248 VGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFG 307
Query: 170 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
CKFHHP++R+ A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 308 TSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 361
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%)
Query: 136 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 195
A + ++ PER +P C++Y+ TGTCK+GA CKFHHPK + + G P
Sbjct: 75 ASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYP 134
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
R G CS Y G CKFG TC+F HP
Sbjct: 135 VREGDNECSYYLKTGQCKFGITCKFHHP 162
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 131 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 190
D G M L S + PERP PDC YYM TG C YG C+++HP++R S + +
Sbjct: 25 DTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRA--SVEATVR 82
Query: 191 PLG-LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R G+ C Y G CKFG +C+F HP
Sbjct: 83 ATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHP 116
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 134 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
AG M + + P R +C YY+ TG CK+G CKFHHP+
Sbjct: 119 AGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQ 163
>gi|225452232|ref|XP_002268612.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera]
gi|296081325|emb|CBI17707.3| unnamed protein product [Vitis vinifera]
Length = 417
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 125/235 (53%), Gaps = 19/235 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
MR EK CPYYMRTGSC +G C+FHHP P+S+G + P S+G S+G+ S+
Sbjct: 147 MRVGEKECPYYMRTGSCGYGANCRFHHPDPTSVGGSEPNGNGESVGGFDSLGNHNGESTI 206
Query: 58 LQYAG----SLPTWSL-----QRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGN 108
L +G S+P+WS +R PY +R SY+P + S +QGI P N Y
Sbjct: 207 LNLSGASQPSMPSWSSHMLSNKRVPYSDNR----SSYVPAMHSVAQGIHPNLDLNGYQAP 262
Query: 109 IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 168
I S L + N+ + H + PERP +P+C Y+M TG CKY
Sbjct: 263 IHSQGMPRHLHSGL---TLNKLMKKSDVSQHYEQTQVEEFPERPGKPECDYFMKTGDCKY 319
Query: 169 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ C++HHPK R+ + GLP RPG+ IC +Y YGICK+G C FDHP
Sbjct: 320 KSACRYHHPKSRVPGLPVCALSDKGLPLRPGKKICWHYESYGICKYGRACLFDHP 374
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 153 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 212
++ +C+YY+ G CKYG C++ H KE + A LGLP R G+ C Y G C
Sbjct: 105 EKIECKYYLTGGGCKYGNSCRYSHSKE-TNELATLEYNFLGLPMRVGEKECPYYMRTGSC 163
Query: 213 KFGPTCRFDHP 223
+G CRF HP
Sbjct: 164 GYGANCRFHHP 174
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ--SAASNIGPLGLPSRPGQAICSNY 206
P RP DC YY+ TG+CK+G +CKF+HP R Q N G GL + C Y
Sbjct: 57 PLRPYAQDCPYYVRTGSCKFGLNCKFNHPVTRTGQVGKERENEGE-GLSEK---IECKYY 112
Query: 207 SMYGICKFGPTCRFDH 222
G CK+G +CR+ H
Sbjct: 113 LTGGGCKYGNSCRYSH 128
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 137 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
++ L + LP R + +C YYM TG+C YGA+C+FHHP
Sbjct: 134 ELATLEYNFLGLPMRVGEKECPYYMRTGSCGYGANCRFHHP 174
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + CPYY+RTGSCKFG+ CKF+HP
Sbjct: 58 LRPYAQDCPYYVRTGSCKFGLNCKFNHP 85
>gi|55819798|gb|AAV66094.1| At5g63260 [Arabidopsis thaliana]
gi|56790210|gb|AAW30022.1| At5g63260 [Arabidopsis thaliana]
Length = 435
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 128/232 (55%), Gaps = 29/232 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG-TALPLTGNASLGSMGSSVLPSSGLQ 59
+R EK CP+YMR GSCKFG CKF+HP P+++G PL G+ G S P +
Sbjct: 193 IRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLY----RGNNGGSFSPKA--- 245
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQS--YMPLIVSPSQGIVP-APGWNTYMGNIG------ 110
P+ + + + + GT + ++P + S+G+ P A WN Y +
Sbjct: 246 -----PSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERS 300
Query: 111 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 170
PL+P+S +N + + + + S + PERPDQP+C YY+ TG CK+
Sbjct: 301 PLAPSSYQVNNSLAET-------SSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKY 353
Query: 171 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
CK+HHPK R+ + AA + GLP RP Q++C++YS YGICKFGP CRFDH
Sbjct: 354 KCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDH 405
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 209
E P +C+YY TG CKYG C+F H KE + ++ + LGLP RPG+ C Y
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206
Query: 210 GICKFGPTCRFDHP 223
G CKFG C+F+HP
Sbjct: 207 GSCKFGSDCKFNHP 220
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP + +C +YM G+CK+G+DCKF+HP
Sbjct: 191 LPIRPGEKECPFYMRNGSCKFGSDCKFNHP 220
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 23/28 (82%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
++ D + C +YMRTGSCK+G +CKF+HP
Sbjct: 100 VKPDSEDCSFYMRTGSCKYGSSCKFNHP 127
>gi|15242694|ref|NP_201131.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
gi|62901484|sp|Q5RJC5.2|C3H67_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 67;
Short=AtC3H67; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 5
gi|10177307|dbj|BAB10568.1| unnamed protein product [Arabidopsis thaliana]
gi|110737489|dbj|BAF00687.1| hypothetical protein [Arabidopsis thaliana]
gi|332010341|gb|AED97724.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
Length = 435
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 128/232 (55%), Gaps = 29/232 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG-TALPLTGNASLGSMGSSVLPSSGLQ 59
+R EK CP+YMR GSCKFG CKF+HP P+++G PL G+ G S P +
Sbjct: 193 IRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLY----RGNNGGSFSPKA--- 245
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQS--YMPLIVSPSQGIVP-APGWNTYMGNIG------ 110
P+ + + + + GT + ++P + S+G+ P A WN Y +
Sbjct: 246 -----PSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERS 300
Query: 111 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 170
PL+P+S +N + + + + S + PERPDQP+C YY+ TG CK+
Sbjct: 301 PLAPSSYQVNNSLAET-------SSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKY 353
Query: 171 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
CK+HHPK R+ + AA + GLP RP Q++C++YS YGICKFGP CRFDH
Sbjct: 354 KCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDH 405
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 209
E P +C+YY TG CKYG C+F H KE + ++ + LGLP RPG+ C Y
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206
Query: 210 GICKFGPTCRFDHP 223
G CKFG C+F+HP
Sbjct: 207 GSCKFGSDCKFNHP 220
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP + +C +YM G+CK+G+DCKF+HP
Sbjct: 191 LPIRPGEKECPFYMRNGSCKFGSDCKFNHP 220
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R D + C +YMRTGSCK+G +CKF+HP
Sbjct: 100 VRPDSEDCSFYMRTGSCKYGSSCKFNHP 127
>gi|334188594|ref|NP_001190604.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
gi|332010342|gb|AED97725.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
Length = 451
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 128/232 (55%), Gaps = 29/232 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG-TALPLTGNASLGSMGSSVLPSSGLQ 59
+R EK CP+YMR GSCKFG CKF+HP P+++G PL G+ G S P +
Sbjct: 209 IRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLY----RGNNGGSFSPKA--- 261
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQS--YMPLIVSPSQGIVP-APGWNTYMGNIG------ 110
P+ + + + + GT + ++P + S+G+ P A WN Y +
Sbjct: 262 -----PSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERS 316
Query: 111 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 170
PL+P+S +N + + + + S + PERPDQP+C YY+ TG CK+
Sbjct: 317 PLAPSSYQVNNSLAET-------SSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKY 369
Query: 171 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
CK+HHPK R+ + AA + GLP RP Q++C++YS YGICKFGP CRFDH
Sbjct: 370 KCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDH 421
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 209
E P +C+YY TG CKYG C+F H KE + ++ + LGLP RPG+ C Y
Sbjct: 163 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 222
Query: 210 GICKFGPTCRFDHP 223
G CKFG C+F+HP
Sbjct: 223 GSCKFGSDCKFNHP 236
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 26/131 (19%)
Query: 114 PTSIAGSNLIYSSR-----NQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 168
P S+ N+ SR +Q + G++ ++ P RPD DC +YM TG+CKY
Sbjct: 63 PISVPQGNVETDSRALFGSDQKEEEEGSEKRMMMV----YPVRPDSEDCSFYMRTGSCKY 118
Query: 169 GADCKFHHPKERIAQ-----------SAASNIGPLGLPSR------PGQAICSNYSMYGI 211
G+ CKF+HP R Q + IG + R P C Y G
Sbjct: 119 GSSCKFNHPVRRKLQDLKFLGSMRTRNGKEYIGRERVRERDEDVENPKLMECKYYFRTGG 178
Query: 212 CKFGPTCRFDH 222
CK+G +CRF H
Sbjct: 179 CKYGESCRFSH 189
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 40/177 (22%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R D + C +YMRTGSCK+G +CKF+HP L LGSM + +G +Y
Sbjct: 100 VRPDSEDCSFYMRTGSCKYGSSCKFNHP------VRRKLQDLKFLGSMRTR----NGKEY 149
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
G +R R + P ++ Y G S S
Sbjct: 150 IGR------ERV-----RERDEDVENPKLME----------CKYYFRTGGCKYGESCRFS 188
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
++ + + +++ L LP RP + +C +YM G+CK+G+DCKF+HP
Sbjct: 189 HM----KEHNSPASVPELNFLG-----LPIRPGEKECPFYMRNGSCKFGSDCKFNHP 236
>gi|356513852|ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 490
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 124/230 (53%), Gaps = 13/230 (5%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E+ CPYYMRTGSCKFG CKF+HP P+++G + S+ S
Sbjct: 237 IRPGERECPYYMRTGSCKFGANCKFNHPDPTAVGGGGGNPPSGYGNGGSISLQGVS---- 292
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGI-VPAPGWNTYMGNIGPLSPTSIAG 119
S+P+WS R L ++P+++SP+QG+ + WN Y ++ L SI
Sbjct: 293 QTSVPSWSSPRT------LNEASPFVPMMLSPTQGVSTQSSDWNGYQASV-YLPERSIHP 345
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
+ + D H PERP +P+C +++ TG CK+ ++CKFHHPK
Sbjct: 346 PSTFVMNNPAIDTNV-YMHHQKQMPVDEFPERPGEPECSFFLKTGDCKFKSNCKFHHPKN 404
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 229
R+ + N+ GLP RP Q++CS+YS YGICKFGP C+FDHP P+
Sbjct: 405 RVTRLPPCNLSDKGLPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPV 454
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL-GLPSRPGQ 200
S + + P RP+ DC +YM TG CK+G +CKF+HP +R +Q+ G R G
Sbjct: 134 SGGTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIKRKSQAVKEKAGEREETTERSGM 193
Query: 201 AICSNYSMYGICKFGPTCRFDH 222
C Y G CKFG +C+++H
Sbjct: 194 TECKYYQRSGGCKFGKSCKYNH 215
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS--NIGPLGLPSRPG 199
+ + ER +C+YY +G CK+G CK++H + +I+ + A + LGLP RPG
Sbjct: 181 AGEREETTERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRPG 240
Query: 200 QAICSNYSMYGICKFGPTCRFDHP 223
+ C Y G CKFG C+F+HP
Sbjct: 241 ERECPYYMRTGSCKFGANCKFNHP 264
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 140 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
+L + LP RP + +C YYM TG+CK+GA+CKF+HP
Sbjct: 227 LLELNFLGLPIRPGERECPYYMRTGSCKFGANCKFNHP 264
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + + C +YM+TG+CKFG CKF+HP
Sbjct: 142 LRPEAEDCAFYMKTGNCKFGFNCKFNHP 169
>gi|449487726|ref|XP_004157770.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Cucumis sativus]
Length = 473
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 122/235 (51%), Gaps = 45/235 (19%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTG-NASLGSMGSSVLPSSGLQ 59
+R DEK CPYYMRTGSCK+G CKF+HP P+++ + L+G N + G+S
Sbjct: 231 IRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGAS-------- 282
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMG-----NIGPLSP 114
+ +W+ R L +++P ++SPSQ WN Y IG L P
Sbjct: 283 -QSQITSWTSPRV------LNEATTFVPAMISPSQDQ----DWNGYQAPIYPSEIGVLPP 331
Query: 115 -----TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 169
SIA +YSS Q D PERP QP+C Y++ TG CK+
Sbjct: 332 PAYVVNSIAPETDLYSSHQQVD---------------EYPERPGQPECSYFLKTGDCKFK 376
Query: 170 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
+ CK+HHPK R + + GLP RP Q +C+ Y YGICKFGP+C+FDHP+
Sbjct: 377 SLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYRRYGICKFGPSCKFDHPF 431
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
+C++Y+ TG CK+G C+++H + R S + LGLP RP + C Y G CK+G
Sbjct: 191 ECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYG 250
Query: 216 PTCRFDHP 223
C+F+HP
Sbjct: 251 ANCKFNHP 258
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 130 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 189
GD G + S P RPD DC +Y+ TGTCK+G+ CKF+HP + Q + +
Sbjct: 118 GDGGEVERKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKL 177
Query: 190 ----GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G +R C Y G CKFG CR++H
Sbjct: 178 KYEDDSTGTANR---TECKFYLRTGGCKFGNACRYNH 211
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 140 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
IL + LP RPD+ +C YYM TG+CKYGA+CKF+HP
Sbjct: 221 ILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHP 258
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R D + C +Y++TG+CKFG CKF+HP
Sbjct: 138 VRPDAEDCAFYLKTGTCKFGSFCKFNHP 165
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R D+ C YY R G CKFG +CKF HP S T L G+ + + G +
Sbjct: 403 LRPDQNVCTYYRRYGICKFGPSCKFDHPFLPSSSTVGELEQQPHYGNFST----AEGAEM 458
Query: 61 AG 62
AG
Sbjct: 459 AG 460
>gi|307136126|gb|ADN33972.1| nucleic acid binding protein [Cucumis melo subsp. melo]
Length = 475
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 123/235 (52%), Gaps = 45/235 (19%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTG-NASLGSMGSSVLPSSGLQ 59
+R DEK CPYYMRTGSCK+G CKF+HP P+++ + L+G N + G+S
Sbjct: 233 IRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGAS-------- 284
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-----LSP 114
+ +W+ R L +++P ++SPSQ WN Y I P L P
Sbjct: 285 -QSQITSWTSPRV------LNEATTFVPAMISPSQD----SEWNGYQAPIYPSEISVLPP 333
Query: 115 -----TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 169
+IA +YSS Q D PERP QP+C Y++ TG CK+
Sbjct: 334 PPYVVNNIAPEADLYSSHQQVD---------------EYPERPGQPECSYFLKTGDCKFK 378
Query: 170 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
+ CK+HHPK R + + GLP RP Q +C+ YS YGICKFGP+C+FDHP+
Sbjct: 379 SLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKFDHPF 433
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 153 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 212
++ +C++Y+ TG CK+G C+++H + R S + LGLP RP + C Y G C
Sbjct: 190 NKTECKFYLRTGGCKFGNACRYNHTRSRALTSPILELNFLGLPIRPDEKECPYYMRTGSC 249
Query: 213 KFGPTCRFDHP 223
K+G C+F+HP
Sbjct: 250 KYGANCKFNHP 260
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG-PLGLPSRPGQA 201
S P RP+ DC +Y+ TGTCK+G+ CKF+HP + Q + + +
Sbjct: 133 GKSNQYPVRPEAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYDDDSAGTANKT 192
Query: 202 ICSNYSMYGICKFGPTCRFDH 222
C Y G CKFG CR++H
Sbjct: 193 ECKFYLRTGGCKFGNACRYNH 213
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 140 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
IL + LP RPD+ +C YYM TG+CKYGA+CKF+HP
Sbjct: 223 ILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHP 260
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 57/283 (20%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP--QPSSLGTALPLTGNASLGSMGSS----VLP 54
+R + + C +Y++TG+CKFG CKF+HP + + + + + S G+ + L
Sbjct: 140 VRPEAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYDDDSAGTANKTECKFYLR 199
Query: 55 SSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP---APGWNTYMGN--I 109
+ G ++ G+ ++ R+ L+S + +++ L + P + P G Y N
Sbjct: 200 TGGCKF-GNACRYNHTRSRALTSPILEL-NFLGLPIRPDEKECPYYMRTGSCKYGANCKF 257
Query: 110 GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 169
PT++AGS + N L +Q I S +S + +N T
Sbjct: 258 NHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSPRV------------LNEATTFVP 305
Query: 170 A------DCKFHHPKERIAQSAAS----------NIGPLG-----------LPSRPGQAI 202
A D +++ + I S S NI P P RPGQ
Sbjct: 306 AMISPSQDSEWNGYQAPIYPSEISVLPPPPYVVNNIAPEADLYSSHQQVDEYPERPGQPE 365
Query: 203 CSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSL 245
CS + G CKF C++ H P N LP ++ D L
Sbjct: 366 CSYFLKTGDCKFKSLCKYHH-----PKNRNPKLPTCTLNDKGL 403
>gi|255551693|ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223543980|gb|EEF45506.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 481
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 135/245 (55%), Gaps = 32/245 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL------------GTALPLTGNASLGSM 48
+R EK C YY++TG CKFGV CKFHHPQP++L P+ +A ++
Sbjct: 138 LRPGEKECTYYVKTGQCKFGVTCKFHHPQPANLQIQAQSPALQVAPVPAPVPASALYPNV 197
Query: 49 GSSVLPSSGLQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMG 107
S +PS+ QY + R P L S +QG Y P++VSP G+VP P W+ Y G
Sbjct: 198 QSPSVPST-QQYG-----LVVARPPLLPGSYVQGP--YGPMLVSP--GVVPYPSWSPYPG 247
Query: 108 NIGPL-SPTSIAGSNLIYSSRNQGDLGA----GAQMHILSASSQN----LPERPDQPDCR 158
I P+ SP++ G Q A G + S+S+Q PERP QP+C+
Sbjct: 248 PISPVASPSTQLGVGSGVYGITQLSPSAPAYTGGYQAMPSSSNQKEQPSFPERPGQPECQ 307
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 218
YYM TG CK+G+ CK+HHP E IA + P+GLP RPG C++Y+ G CKFGP C
Sbjct: 308 YYMKTGDCKFGSSCKYHHPPELIAPKTNVVLSPMGLPLRPGAPHCTHYTQRGQCKFGPAC 367
Query: 219 RFDHP 223
+FDHP
Sbjct: 368 KFDHP 372
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 67/134 (50%), Gaps = 13/134 (9%)
Query: 102 WNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLG------------AGAQMHILSASSQNLP 149
W +G + P P ++ IY R G G GA + A + P
Sbjct: 33 WQLGLGEVEPGYPERPEEADCIYYLRT-GFCGYGSRCRFNHPRDRGAVLGAARAGAAEFP 91
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 209
ER QP C+YYM TGTCK+GA CK+HHPK+ + ++ G P RPG+ C+ Y
Sbjct: 92 ERVGQPVCQYYMRTGTCKFGASCKYHHPKQGGGSANPVSLNYYGYPLRPGEKECTYYVKT 151
Query: 210 GICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 152 GQCKFGVTCKFHHP 165
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 200
L PERP++ DC YY+ TG C YG+ C+F+HP++R A A+ G P R GQ
Sbjct: 37 LGEVEPGYPERPEEADCIYYLRTGFCGYGSRCRFNHPRDRGAVLGAARAGAAEFPERVGQ 96
Query: 201 AICSNYSMYGICKFGPTCRFDHPYAG 226
+C Y G CKFG +C++ HP G
Sbjct: 97 PVCQYYMRTGTCKFGASCKYHHPKQG 122
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 65/177 (36%), Gaps = 57/177 (32%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R +E C YY+RTG C +G C+F+H P G L G A G A
Sbjct: 47 RPEEADCIYYLRTGFCGYGSRCRFNH--PRDRGAVL---GAARAG--------------A 87
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
P Q Q YM + T G++
Sbjct: 88 AEFPERVGQPV---------CQYYM-------------------------RTGTCKFGAS 113
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
Y QG G + +S + P RP + +C YY+ TG CK+G CKFHHP+
Sbjct: 114 CKYHHPKQG----GGSANPVSLNYYGYPLRPGEKECTYYVKTGQCKFGVTCKFHHPQ 166
>gi|449469596|ref|XP_004152505.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Cucumis sativus]
Length = 473
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 123/235 (52%), Gaps = 45/235 (19%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTG-NASLGSMGSSVLPSSGLQ 59
+R DEK CPYYMRTGSCK+G CKF+HP P+++ + L+G N + G+S
Sbjct: 231 IRPDEKECPYYMRTGSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGAS-------- 282
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-----LSP 114
+ +W+ R L +++P ++SPSQ WN Y I P L P
Sbjct: 283 -QSQITSWTSPRV------LNEATTFVPAMISPSQDQ----DWNGYQAPIYPSEISVLPP 331
Query: 115 TSIAGSNL-----IYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 169
+ +N+ +YSS Q D PERP QP+C Y++ TG CK+
Sbjct: 332 PAYVVNNIAPETDLYSSHQQVD---------------EYPERPGQPECSYFLKTGDCKFK 376
Query: 170 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
+ CK+HHPK R + + GLP RP Q +C+ Y YGICKFGP+C+FDHP+
Sbjct: 377 SLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYRRYGICKFGPSCKFDHPF 431
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
+C++Y+ TG CK+G C+++H + R S + LGLP RP + C Y G CK+G
Sbjct: 191 ECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRTGSCKYG 250
Query: 216 PTCRFDHP 223
C+F+HP
Sbjct: 251 ANCKFNHP 258
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 130 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 189
GD G + S P RPD DC +Y+ TGTCK+G+ CKF+HP + Q + +
Sbjct: 118 GDGGEVERKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKL 177
Query: 190 ----GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G +R C Y G CKFG CR++H
Sbjct: 178 KYEDDSTGTANR---TECKFYLRTGGCKFGNACRYNH 211
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 140 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
IL + LP RPD+ +C YYM TG+CKYGA+CKF+HP
Sbjct: 221 ILELNFLGLPIRPDEKECPYYMRTGSCKYGANCKFNHP 258
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 111/283 (39%), Gaps = 57/283 (20%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP--QPSSLGTALPLTGNASLGSMGSS----VLP 54
+R D + C +Y++TG+CKFG CKF+HP + + + + + S G+ + L
Sbjct: 138 VRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYEDDSTGTANRTECKFYLR 197
Query: 55 SSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP---APGWNTYMGN--I 109
+ G ++ G+ ++ R L+S + +++ L + P + P G Y N
Sbjct: 198 TGGCKF-GNACRYNHTRPRALTSPILEL-NFLGLPIRPDEKECPYYMRTGSCKYGANCKF 255
Query: 110 GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 169
PT++AGS + N L +Q I S +S + +N T
Sbjct: 256 NHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSPRV------------LNEATTFVP 303
Query: 170 A------DCKFHHPKERIAQSAAS----------NIGPL-----------GLPSRPGQAI 202
A D ++ + I S S NI P P RPGQ
Sbjct: 304 AMISPSQDQDWNGYQAPIYPSEISVLPPPAYVVNNIAPETDLYSSHQQVDEYPERPGQPE 363
Query: 203 CSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSL 245
CS + G CKF C++ H P N LP ++ D L
Sbjct: 364 CSYFLKTGDCKFKSLCKYHH-----PKNRNPKLPTCTLNDKGL 401
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R D+ C YY R G CKFG +CKF HP S T L G+ + + G +
Sbjct: 403 LRPDQNVCTYYRRYGICKFGPSCKFDHPFLPSSSTVGELEQQPHYGNFST----AEGAEM 458
Query: 61 AG 62
AG
Sbjct: 459 AG 460
>gi|3738297|gb|AAC63639.1| unknown protein [Arabidopsis thaliana]
Length = 553
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 123/245 (50%), Gaps = 29/245 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R+ + C YY++TG CKFG+ CKFHHPQP+ P S++P QY
Sbjct: 209 VREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPD---QY 265
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
G + + R S +QG +Y P++++P G+VP PGW+ Y L A
Sbjct: 266 GGPSSSLRVARTLLPGSYMQG--AYGPMLLTP--GVVPIPGWSPYSSLTVSLLLLLQAPV 321
Query: 121 NLIYSSRNQGDLGAGAQMHILSASS----------------------QNLPERPDQPDCR 158
+ S Q +GA + + +S Q PERP +P+C+
Sbjct: 322 SPALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQ 381
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 218
YY+ TG CK+G CKFHHP++R+ A + P+GLP RPG C+ Y G CKFG TC
Sbjct: 382 YYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTC 441
Query: 219 RFDHP 223
+FDHP
Sbjct: 442 KFDHP 446
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%)
Query: 136 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 195
A + ++ PER +P C++Y+ TGTCK+GA CKFHHPK + + G P
Sbjct: 149 ASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYP 208
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
R G CS Y G CKFG TC+F HP
Sbjct: 209 VREGDNECSYYLKTGQCKFGITCKFHHP 236
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-LPSRPGQAIC 203
S + PERP PDC YYM TG C YG C+++HP++R S + + G P R G+ C
Sbjct: 113 SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDR--ASVEATVRATGQYPERFGEPPC 170
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y G CKFG +C+F HP
Sbjct: 171 QFYLKTGTCKFGASCKFHHP 190
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 134 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
AG M + + P R +C YY+ TG CK+G CKFHHP+
Sbjct: 193 AGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQ 237
>gi|356568483|ref|XP_003552440.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Glycine max]
Length = 362
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 125/240 (52%), Gaps = 42/240 (17%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C YY+RTG CKFG CKFHHPQP+++ L + + ++ S P Y
Sbjct: 110 LRPNEPECGYYLRTGQCKFGNTCKFHHPQPNNM--VLSMRSSPVYPTVHSPTTPGH-QSY 166
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
A + WS S +P+P W GP S S GS
Sbjct: 167 ATGITNWS------------------------SSSYIPSPRWQ------GPSSYAS--GS 194
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
YS G + G + +N+ PERPDQP+C++YM TG CK+GA C+FHHP E
Sbjct: 195 QGAYSQFRSGSVPVG----FYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHPHE 250
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
R+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + Y +S PL+
Sbjct: 251 RMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGVF--TYNMSASPLA 308
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLGLPSRPGQAICS 204
PER QP+C+YY+ TGTCK+GA C+FHHP+++ IA A NI LG P RP + C
Sbjct: 61 EFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVALNI--LGYPLRPNEPECG 118
Query: 205 NYSMYGICKFGPTCRFDHP 223
Y G CKFG TC+F HP
Sbjct: 119 YYLRTGQCKFGNTCKFHHP 137
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPLGLPSRPGQ 200
+ S+ PE P +PDC YY+ TG C++GA C+F+HP R +A +AA G P R GQ
Sbjct: 11 TMESEPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGE--FPERIGQ 68
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C Y G CKFG TCRF HP
Sbjct: 69 PECQYYLKTGTCKFGATCRFHHP 91
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
E C YY+RTG C+FG C+F+HP L A
Sbjct: 23 EPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 54
>gi|356535424|ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 32-like [Glycine max]
Length = 494
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 139/238 (58%), Gaps = 24/238 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YY++TG CKFG++CKFHHPQP+ GT+LP + + S +P QY
Sbjct: 138 LRPGEKECSYYLKTGQCKFGISCKFHHPQPA--GTSLPTSAPQFYQQVQSPTVPLPE-QY 194
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSPT--- 115
G+ + + R P L S +QG +Y P+++SP G+V PGW+ Y + P LSP
Sbjct: 195 GGASTSLRVARPPVLPGSYVQG--AYGPVLLSP--GVVQFPGWSHYSAPVSPVLSPGAQP 250
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHI-LSASS---------QNLPERPDQPDCRYYMNTGT 165
++ ++L ++ A A+ + LS+++ Q PERP +P+C+YY+ TG
Sbjct: 251 TVGATSLYGVTQLSSPTSAFARPYTPLSSTTGPSGSNLKDQFFPERPGEPECQYYLRTGD 310
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
CK+G C++HHP++ I A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 311 CKFGLACRYHHPRDHIV--ARPLLSPVGLPLRPGVQPCAFYLQNGHCKFGSTCKFDHP 366
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 48/77 (62%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
+ PER +P C+YY+ TGTCK+GA CKFHHPK + + G P RPG+ CS Y
Sbjct: 89 DYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLTQAPLNIYGYPLRPGEKECSYY 148
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG +C+F HP
Sbjct: 149 LKTGQCKFGISCKFHHP 165
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 131 DLGAGAQM-HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 189
D G M H+ ++ PERP P+C YYM TG C YG+ C+++HP++R A +AA +
Sbjct: 27 DTGLEESMWHLTLGGGESYPERPGVPNCVYYMRTGVCGYGSRCRYNHPRDRAAVAAAVRV 86
Query: 190 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
P R G+ C Y G CKFG +C+F HP G
Sbjct: 87 TG-DYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNG 122
>gi|224119564|ref|XP_002318105.1| predicted protein [Populus trichocarpa]
gi|222858778|gb|EEE96325.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 123/228 (53%), Gaps = 25/228 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C Y+MR GSCKFG CK++HP P+++G GS S + G
Sbjct: 228 IRLGEKECEYFMRNGSCKFGANCKYNHPDPTAVG-----------GSDHPSTFLNGGSAS 276
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP-APGWNTYMGNIGPLS-----P 114
+ S+ + L S++P++ SP+QG+ P +P WN Y + P P
Sbjct: 277 LPVPSSSSVGSWSSPRA-LNDPTSFVPIMFSPNQGVPPQSPDWNGYQAPLYPPERSLHPP 335
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
S A N+ S ++ A Q I+ PERP QP C +YM G CK+ ++CK+
Sbjct: 336 LSYALINIATES----NVYAPQQQQIVV---DEFPERPGQPQCSFYMKFGDCKFKSNCKY 388
Query: 175 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
HHPK RI++S + GLP RP Q ICS+YS YGICKFGP+C+FDH
Sbjct: 389 HHPKNRISKSPPLTLSDKGLPLRPDQNICSHYSRYGICKFGPSCKFDH 436
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ----SAASNIGPLGLPSR 197
S+ P RP+ DC +YM TGTCK+GA+CKF+HP R Q +
Sbjct: 117 SSGYHQYPVRPEAEDCAFYMKTGTCKFGANCKFNHPLRRKNQVQLTVKEKTKEREEATEK 176
Query: 198 PGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
P C Y G CK+G CRF+H A Y S+PP+ I
Sbjct: 177 PSLIECKYYLKTGGCKYGTACRFNHSRAKY------SVPPVKI 213
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHH-------PKERIAQSAASNIGPLGLPSRPGQAI 202
E+P +C+YY+ TG CKYG C+F+H P +I S A + LGLP R G+
Sbjct: 175 EKPSLIECKYYLKTGGCKYGTACRFNHSRAKYSVPPVKIPMSPALELNFLGLPIRLGEKE 234
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C + G CKFG C+++HP
Sbjct: 235 CEYFMRNGSCKFGANCKYNHP 255
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + + C +YM+TG+CKFG CKF+HP
Sbjct: 125 VRPEAEDCAFYMKTGTCKFGANCKFNHP 152
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP R + +C Y+M G+CK+GA+CK++HP
Sbjct: 226 LPIRLGEKECEYFMRNGSCKFGANCKYNHP 255
>gi|255559296|ref|XP_002520668.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223540053|gb|EEF41630.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 478
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 134/242 (55%), Gaps = 27/242 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E C YY++TG CKFG+ CKFHHPQP+ G++LP + + S +P QY
Sbjct: 141 LRPGENECSYYLKTGQCKFGITCKFHHPQPA--GSSLPESAPQFYQPVQSPSIPIPD-QY 197
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSP---- 114
G+ + + R P L S +QG +Y P++ SP G+VP PGW+ Y + P LSP
Sbjct: 198 GGASASLRV-RPPLLPGSYVQG--AYGPVLFSP--GVVPIPGWSPYSAPVSPVLSPSAQP 252
Query: 115 ----TSIAGSNLIYSSR-------NQGDLGAGAQMHILSAS--SQNLPERPDQPDCRYYM 161
TS+ G + SS A A LS + Q PERP +P+C+YY+
Sbjct: 253 AVGATSLYGVTQLSSSTPALAGPYPSPSSAAAAAAAPLSGTQKEQTFPERPGEPECQYYL 312
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+G+ C++HHP++R+ + PLGLP RPG C+ Y G CKFG TC+FD
Sbjct: 313 RTGDCKFGSSCRYHHPRDRVVPRTNCVLSPLGLPLRPGAQHCTFYLRNGHCKFGSTCKFD 372
Query: 222 HP 223
HP
Sbjct: 373 HP 374
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 46/75 (61%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PER +P C +Y+ TGTCK+GA CKFHHPK + + G P RPG+ CS Y
Sbjct: 94 PERIGEPSCEFYLKTGTCKFGASCKFHHPKHGGGSLSHVPLNTHGYPLRPGENECSYYLK 153
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 154 TGQCKFGITCKFHHP 168
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 201
S ++ PERP PDC YYM TG C YG C+++HP+ R A AA P R G+
Sbjct: 42 SGGGESYPERPGVPDCVYYMRTGFCGYGNRCRYNHPRNRAAVEAAVRATGE-YPERIGEP 100
Query: 202 ICSNYSMYGICKFGPTCRFDHPYAG 226
C Y G CKFG +C+F HP G
Sbjct: 101 SCEFYLKTGTCKFGASCKFHHPKHG 125
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 133 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK---ERIAQSAASNI 189
G G+ H+ ++ P RP + +C YY+ TG CK+G CKFHHP+ + +SA
Sbjct: 125 GGGSLSHV-PLNTHGYPLRPGENECSYYLKTGQCKFGITCKFHHPQPAGSSLPESAPQFY 183
Query: 190 GPLGLPSRP 198
P+ PS P
Sbjct: 184 QPVQSPSIP 192
>gi|356500268|ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 471
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 157/305 (51%), Gaps = 28/305 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YY++TG CKFG++CKFHHPQP+ GT+LP + + S +P QY
Sbjct: 138 LRPGEKECSYYLKTGQCKFGISCKFHHPQPA--GTSLPASAPQFYQQVQSPTVPLP-EQY 194
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SP---- 114
G+ + + R P L S +QG +Y P+++SP G+V PGW+ Y + P+ SP
Sbjct: 195 GGASSSLRVARPPILPGSYVQG--AYGPVLLSP--GVVQFPGWSHYSAPVSPVPSPGAQP 250
Query: 115 ----TSIAGSNLIYS-----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 165
TS+ G + S +R L + + Q PERP +P+C+YY+ TG
Sbjct: 251 AVGATSLYGVTQLSSPTSAFARPYTPLPSTTDPSRSNPKEQLYPERPGEPECQYYLRTGD 310
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
CK+G C++HHP++ I A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 311 CKFGLACRYHHPRDHIV--ARPLLSPVGLPLRPGLQPCAFYLQNGHCKFGSTCKFDHPLG 368
Query: 226 GYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPD 285
+ Y S S++D + + S + S +S P + S S + P
Sbjct: 369 S--MRYSPSA--SSLIDVPVTPYPVGSLLSQLAPSTTSSDLRPELMSGSKKESFSARIPS 424
Query: 286 MKNST 290
NS+
Sbjct: 425 SGNSS 429
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
+ PER +P C+YY+ TGTCK+GA CKFHHPK + + + G P RPG+ CS Y
Sbjct: 89 DYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNVYGYPLRPGEKECSYY 148
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG +C+F HP
Sbjct: 149 LKTGQCKFGISCKFHHP 165
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 139 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
H+ ++ PER P+C YYM TG C YG C+++HP++R A +AA P R
Sbjct: 36 HLTLGGGESYPERSGVPNCVYYMRTGVCGYGGRCRYNHPRDRAAVAAAVRAT-GDYPERV 94
Query: 199 GQAICSNYSMYGICKFGPTCRFDHPYAG 226
G+ C Y G CKFG +C+F HP G
Sbjct: 95 GEPPCQYYLKTGTCKFGASCKFHHPKNG 122
>gi|356536737|ref|XP_003536892.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 32-like [Glycine max]
Length = 473
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/237 (38%), Positives = 134/237 (56%), Gaps = 25/237 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R DEK C YY++TG CK+G++CKFHHPQP+ GT+LP + + S +P QY
Sbjct: 139 LRSDEKECSYYLKTGQCKYGISCKFHHPQPA--GTSLPASAAQFYQQVQSPTVPLP-EQY 195
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTY----MGNIGPLSPT 115
G+ + + R P L S +QG +Y P+ +SP G+V PGWN Y M + P +
Sbjct: 196 VGASSSLRVARPPILPGSYVQG--AYGPVFLSP--GVVQFPGWNHYSVRGMCAL-PGTQP 250
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL----------PERPDQPDCRYYMNTGT 165
+ ++L ++ A A+ + L SS L P+RP +PDC+YY+ TG
Sbjct: 251 GVGATSLYGVTQLSSPTSAFARPYTLLPSSTGLSGSNLKEQLYPKRPGEPDCQYYLRTGD 310
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
CK+G C++HHP++ + A + P+GLP RPG C+ Y G CKFG TC+FDH
Sbjct: 311 CKFGLACQYHHPQDHVV--AQPLLSPVGLPLRPGLQPCAFYLQNGHCKFGSTCKFDH 365
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 102 WNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHI-----------LSASSQNLPE 150
W+ +G G P N +Y R G G G + + + PE
Sbjct: 35 WHLTLGGGGESYPERPGVPNCVYYMRT-GVCGYGGRCRYNHPHDRAAVVAAVRVTGDYPE 93
Query: 151 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 210
R +P C+YY+ TGTCK+GA CKFHHPK + + + G P R + CS Y G
Sbjct: 94 RLGEPPCQYYLKTGTCKFGASCKFHHPKNGGEYLSQAPLNVYGYPLRSDEKECSYYLKTG 153
Query: 211 ICKFGPTCRFDHP 223
CK+G +C+F HP
Sbjct: 154 QCKYGISCKFHHP 166
>gi|297824887|ref|XP_002880326.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326165|gb|EFH56585.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 129/235 (54%), Gaps = 19/235 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS-LGSMGSSVLPSSGLQ 59
+R+ + C YY++TG CKFG+ CKFHHPQP+ P +A S++P Q
Sbjct: 137 VREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPPASAPQFYPSVQSLMPD---Q 193
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSP---- 114
Y G + + R S +QG +Y P++++P G+VP PGW+ Y + P LSP
Sbjct: 194 YGGPSSSLRVARTLLPGSYMQG--AYGPMLLTP--GVVPIPGWSPYSAPVSPALSPGAQH 249
Query: 115 ----TSIAGSNLIYSSRNQ--GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 168
TS+ G + S+ G + + + Q PERP +P+C+YY+ TG CK+
Sbjct: 250 AVGATSLYGVTQLSSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKF 309
Query: 169 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G CKFHHP++R+ A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 310 GTSCKFHHPRDRVPPRANCILSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 364
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 48/88 (54%)
Query: 136 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 195
A + ++ PER +P C++Y+ TGTCK+GA CKFHHPK + G P
Sbjct: 77 ASVEAAVRATGQYPERLGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMTHVPLNIYGYP 136
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
R G CS Y G CKFG TC+F HP
Sbjct: 137 VREGDNECSYYLKTGQCKFGITCKFHHP 164
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 133 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 192
G M L ++ PERP PDC YYM TG C YG C+++HP++R + AA
Sbjct: 29 GLEESMWRLGLGCESYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEAAVRATGQ 88
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P R G+ C Y G CKFG +C+F HP
Sbjct: 89 -YPERLGEPPCQFYLKTGTCKFGASCKFHHP 118
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 134 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
AG M + + P R +C YY+ TG CK+G CKFHHP+
Sbjct: 121 AGGSMTHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQ 165
>gi|242056893|ref|XP_002457592.1| hypothetical protein SORBIDRAFT_03g009920 [Sorghum bicolor]
gi|241929567|gb|EES02712.1| hypothetical protein SORBIDRAFT_03g009920 [Sorghum bicolor]
Length = 449
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 154/331 (46%), Gaps = 51/331 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS--SGL 58
+R EK C YYM+TG CKFG CKFHHP+ L + M V PS S
Sbjct: 132 LRLGEKECSYYMKTGHCKFGSTCKFHHPEVGFL---------SETPGMYPPVQPSPISSS 182
Query: 59 QYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTY---MGNIGPLSP 114
L W + R P + S L G SY P+++ P+ ++P GWN Y M + P
Sbjct: 183 HPYPHLANWQMGRPPVVPGSFLPG--SYPPMMLPPT--VMPMQGWNPYVSPMNQVTPAGG 238
Query: 115 TSIAGSNLIYSSRNQGDLGAG------AQMHILSASSQN------LPERPDQPDCRYYMN 162
+ Y +QG A AQ++ S +S + PERP QP+C +YM
Sbjct: 239 QQAVPAGASYGLSHQGPTSAMTYGSHYAQLYSSSGTSSSNIQEYAFPERPGQPECEHYMK 298
Query: 163 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
TGTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDH
Sbjct: 299 TGTCKYGAVCKYHHPQYFSGPKSNYMLSPLGLPLRPGSQPCAYYAHHGFCKFGPTCKFDH 358
Query: 223 PYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSD------A 276
P + P SI SSL + HS +P +P ++ +SD
Sbjct: 359 P---------MGTPNYSISASSLADVPVAPYPHSFPVTP-----MPPYLPSSDLRPQYTL 404
Query: 277 VSVQHQNPDMKNSTTKNSDDSSKVDHPPHSV 307
V NP TT S + PH++
Sbjct: 405 VKDSSANPPPAPGTTYGPVGSMSKVYAPHTL 435
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLGLPSRPGQAI 202
+ LPERP + DC YY+ TG C YG C+++HP++R G + P RPGQ +
Sbjct: 35 EEKLPERPGEADCAYYLRTGACGYGERCRYNHPRDRPPPVNGVGKTAGMVEYPERPGQPL 94
Query: 203 CSNYSMYGICKFGPTCRFDHPYAG 226
C Y+ G CKFG C+FDHP G
Sbjct: 95 CEYYAKNGTCKFGSNCKFDHPREG 118
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 201
+A PERP QP C YY GTCK+G++CKF HP+E N G P R G+
Sbjct: 80 TAGMVEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPREGGFVPVTLNSS--GFPLRLGEK 137
Query: 202 ICSNYSMYGICKFGPTCRFDHPYAGY 227
CS Y G CKFG TC+F HP G+
Sbjct: 138 ECSYYMKTGHCKFGSTCKFHHPEVGF 163
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
T GSN + +G ++ +S P R + +C YYM TG CK+G+ CKF
Sbjct: 103 TCKFGSNCKFDHPREGGFVP------VTLNSSGFPLRLGEKECSYYMKTGHCKFGSTCKF 156
Query: 175 HHPK 178
HHP+
Sbjct: 157 HHPE 160
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E C YY+RTG+C +G C+++HP+
Sbjct: 41 RPGEADCAYYLRTGACGYGERCRYNHPR 68
>gi|356507323|ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 570
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 121/228 (53%), Gaps = 23/228 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYMRTGSCKFG C+F+HP P+++G G++ G S + G+
Sbjct: 325 IRVGEKECLYYMRTGSCKFGANCRFNHPDPTTVGG-----GDSPSGYGNGSSISLQGVSQ 379
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP-APGWNTYMGNIGPLSPTSIAG 119
+ S + L + ++P+I+SP+ G+ P + WN Y +P ++
Sbjct: 380 SSISSWSSTRP-------LNESAPFVPVILSPNPGVSPQSSEWNGYQ------APVYLSE 426
Query: 120 SNL----IYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+L Y N H + PERP +P+C Y++ TG CK+ ++CKFH
Sbjct: 427 RSLHPPSTYVMNNPAMESNVYMHHQKQMLVEEFPERPGEPECSYFLKTGDCKFKSNCKFH 486
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
HPK RIA+ N+ GLP RP Q +C+ Y YGICKFGP C+FDHP
Sbjct: 487 HPKNRIARLPLCNLSDKGLPLRPDQNVCTYYRRYGICKFGPACKFDHP 534
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 201
+ + ER Q +C+YY+ +G CK+G CKF+H + + + ++A+ + LGLP R G+
Sbjct: 271 AGEREEQAERSGQMECKYYLRSGGCKFGKACKFNHTRGKSSSASATELNFLGLPIRVGEK 330
Query: 202 ICSNYSMYGICKFGPTCRFDHP 223
C Y G CKFG CRF+HP
Sbjct: 331 ECLYYMRTGSCKFGANCRFNHP 352
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
N S + GD+ G + S +Q P RP+ DC +Y+ TGTCK+G +CKF+HP R
Sbjct: 204 NESESDKVGGDV-EGVKGERSSGRAQQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRR 262
Query: 181 IAQSAASNIGPLGLPS-RPGQAICSNYSMYGICKFGPTCRFDH 222
Q+ N G + R GQ C Y G CKFG C+F+H
Sbjct: 263 KNQAKKENAGEREEQAERSGQMECKYYLRSGGCKFGKACKFNH 305
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
+R D+ C YY R G CKFG ACKF HP PS++
Sbjct: 507 LRPDQNVCTYYRRYGICKFGPACKFDHPAPSTM 539
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + + C +Y++TG+CKFG CKF+HP
Sbjct: 232 LRPEAEDCAFYLKTGTCKFGFNCKFNHP 259
>gi|225432344|ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
vinifera]
gi|297736890|emb|CBI26091.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 127/257 (49%), Gaps = 55/257 (21%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS----- 55
+R EK C YY++TG CKFG CKFHHPQP S+ + P ++ P+
Sbjct: 140 LRPGEKECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPAPVPAHTLYPTVQSPS 199
Query: 56 --SGLQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL 112
S QY + R P L SS G Y P+++ P G+VP PGW+ Y + P+
Sbjct: 200 VPSSQQYG-----LVVARPPLLPSSYFHG--PYSPVLIPP--GMVPFPGWSHYPAPVSPV 250
Query: 113 SPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS--------------------------Q 146
+ S Q +G+G QM+ L+ S Q
Sbjct: 251 A-----------SPSTQPTVGSG-QMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQ 298
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PERP QP+C+YYM TG CK+G+ CK+HHP E + P+GLP RPG C++Y
Sbjct: 299 IFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHY 358
Query: 207 SMYGICKFGPTCRFDHP 223
+ GICKFGPTC+FDHP
Sbjct: 359 AQRGICKFGPTCKFDHP 375
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R++G +G + PER QP C++YM TGTCK+GA CK+HHP++ +
Sbjct: 76 RDRGGVGG-----TVRPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSP 130
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ G P RPG+ CS Y G+CKFG TC+F HP
Sbjct: 131 VTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHP 167
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 67/177 (37%), Gaps = 57/177 (32%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R DE C YY++TG C +G C+F+HP+ G +G +V P
Sbjct: 49 RPDEADCIYYLKTGFCGYGARCRFNHPR--------------DRGGVGGTVRPG-----G 89
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
G P Q Q YM + T G++
Sbjct: 90 GEFPERVGQPV---------CQFYM-------------------------KTGTCKFGAS 115
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
Y QG G + ++ + P RP + +C YY+ TG CK+G CKFHHP+
Sbjct: 116 CKYHHPRQG----GGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQ 168
>gi|147853205|emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
Length = 518
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 127/257 (49%), Gaps = 55/257 (21%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS----- 55
+R EK C YY++TG CKFG CKFHHPQP S+ + P ++ P
Sbjct: 180 LRPGEKECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPAPVPAHTLYPXVQSPS 239
Query: 56 --SGLQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL 112
S QY + R P L SS + G Y P+++ P G+VP PGW+ Y + P+
Sbjct: 240 VPSSQQYG-----LVVARPPLLPSSYIHG--PYSPVLIPP--GMVPFPGWSHYPAPVSPV 290
Query: 113 SPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS--------------------------Q 146
+ S Q +G+G QM+ L+ S Q
Sbjct: 291 A-----------SPSTQPTVGSG-QMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQ 338
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PERP QP+C+YYM TG CK+G+ CK+HHP E + P+GLP RPG C++Y
Sbjct: 339 IFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHY 398
Query: 207 SMYGICKFGPTCRFDHP 223
+ GICKFGPTC+FDHP
Sbjct: 399 AQRGICKFGPTCKFDHP 415
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R++G +G + PER QP C++YM TGTCK+GA CK+HHP++ +
Sbjct: 116 RDRGGVGG-----TVRPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSP 170
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ G P RPG+ CS Y G+CKFG TC+F HP
Sbjct: 171 VTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHP 207
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 67/177 (37%), Gaps = 57/177 (32%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R DE C YY++TG C +G C+F+HP+ G +G +V P
Sbjct: 89 RPDEADCIYYLKTGFCGYGARCRFNHPR--------------DRGGVGGTVRPG-----G 129
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
G P Q Q YM + T G++
Sbjct: 130 GEFPERVGQPV---------CQFYM-------------------------KTGTCKFGAS 155
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
Y QG G + ++ + P RP + +C YY+ TG CK+G CKFHHP+
Sbjct: 156 CKYHHPRQG----GGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQ 208
>gi|297793917|ref|XP_002864843.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310678|gb|EFH41102.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 121/226 (53%), Gaps = 17/226 (7%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK CP+YMR GSCKFG CKF+HP P+++G G ++G +
Sbjct: 192 IRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIG-----------GVDSPLFRGNNGGPF 240
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQS--YMPLIVSPSQGIVP-APGWNTYMGNIG-PLSPTS 116
+ P+ + + + + GT + ++P + ++G+ P A WN Y + P +
Sbjct: 241 SPKAPSQASSTSWSSTRHINGTGTAPFIPAMFPHNRGVSPQASEWNGYQASSAYPPERSV 300
Query: 117 IAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
+A S Y N + + + PERPDQP+C YY+ TG CK+ CK+HH
Sbjct: 301 LAPS--TYPVNNSLAETSSFSQYQHQMPGEEFPERPDQPECTYYLKTGDCKFKYKCKYHH 358
Query: 177 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
PK R+ + A + GLP RP Q++C++YS YGICKFGP CRFDH
Sbjct: 359 PKNRLPKQAPFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDH 404
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 209
E P +C+YY TG CKYG C+F H KE + ++ ++ LGLP RPG+ C Y
Sbjct: 146 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHTSLASGPDLNFLGLPIRPGEKECPFYMRN 205
Query: 210 GICKFGPTCRFDHP 223
G CKFG C+F+HP
Sbjct: 206 GSCKFGSDCKFNHP 219
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Query: 132 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
L +G ++ L LP RP + +C +YM G+CK+G+DCKF+HP
Sbjct: 179 LASGPDLNFLG-----LPIRPGEKECPFYMRNGSCKFGSDCKFNHP 219
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
+R D + C +YMRTGSCK+G +CKF+HP L
Sbjct: 99 VRPDAEDCSFYMRTGSCKYGSSCKFNHPLRKKL 131
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
+R D+ C +Y R G CKFG AC+F H P + + T A G
Sbjct: 378 LRPDQSMCTHYSRYGICKFGPACRFDHSIPPTFSPSSSQTVEAPQG 423
>gi|218198268|gb|EEC80695.1| hypothetical protein OsI_23121 [Oryza sativa Indica Group]
Length = 217
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 117/220 (53%), Gaps = 32/220 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MR +EK C YY+RTG CKF CKFHHPQPS+ A+ S+ S G S Y
Sbjct: 1 MRPNEKECAYYLRTGQCKFASTCKFHHPQPSNTMVAV----RNSMYSPGQSATSPGQHTY 56
Query: 61 AGSLPTWSLQR-APYLSS-RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP---- 114
G++ W+L R A +++S R G Y P+IV QG+V PGWN Y +G SP
Sbjct: 57 PGAVTNWTLSRSASFIASPRWPGHSGYAPVIVP--QGLVQVPGWNPYAAQMGSSSPDDQQ 114
Query: 115 ---------------TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCR 158
T G + +Y S G + G + + +N+ PERPDQP+C+
Sbjct: 115 RTPVTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVG----VYTVQGENIFPERPDQPECQ 170
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
+YM TG CK+GA CKFHHPKER+ + + LGLP RP
Sbjct: 171 FYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRP 210
>gi|224107375|ref|XP_002314462.1| predicted protein [Populus trichocarpa]
gi|222863502|gb|EEF00633.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/246 (38%), Positives = 132/246 (53%), Gaps = 33/246 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT--------ALPLTGNASLGSMGSSV 52
+R E+ C YY++TG CKFG CKFHHPQP+++ + + +M S
Sbjct: 138 LRPGERECTYYIKTGQCKFGATCKFHHPQPANMQIPAQSLAPQVASVPAHTLYPTMQSPS 197
Query: 53 LPSSGLQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP 111
+PSS Q G + + R P L S +QG Y P+++SPS +VP P W+ Y + P
Sbjct: 198 VPSS--QQYGVM----VARPPLLPGSYVQGP--YGPVLLSPS--LVPYPSWSPYPAPVSP 247
Query: 112 L-SPTS--IAGSNLIYSSRN---QGDLGAGAQMHILSA-----SSQN---LPERPDQPDC 157
+ SP + GS +Y GA I +A SSQ PERP QP+C
Sbjct: 248 VASPNAQPAVGSGSVYGISPLSPSAPAYTGAYQSIPTAKGPSSSSQKEHVFPERPGQPEC 307
Query: 158 RYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
+YYM TG CK+ + C++HHP E + + P+GLP RPG C++Y+ +G CKFGP
Sbjct: 308 QYYMKTGDCKFESSCRYHHPPELVTSKTNVVLSPMGLPLRPGAPTCTHYTQHGQCKFGPA 367
Query: 218 CRFDHP 223
C+FDHP
Sbjct: 368 CKFDHP 373
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 126 SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 185
S + L G + + PERP++ DC YY+ TG C YGA C+++HP++R A
Sbjct: 22 SGQETGLEEGVWQLEIGETESEYPERPNEQDCMYYLRTGFCGYGARCRYNHPRDRTAVLG 81
Query: 186 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
A+ G P R GQ +C Y G CKFG +C+++HP G G S+ P+S+
Sbjct: 82 AARAGGGEFPERVGQPLCQYYMRTGTCKFGASCKYNHPKQG-----GSSVRPVSL 131
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%)
Query: 136 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 195
A + A PER QP C+YYM TGTCK+GA CK++HPK+ + ++ G P
Sbjct: 78 AVLGAARAGGGEFPERVGQPLCQYYMRTGTCKFGASCKYNHPKQGGSSVRPVSLNYYGYP 137
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
RPG+ C+ Y G CKFG TC+F HP
Sbjct: 138 LRPGERECTYYIKTGQCKFGATCKFHHP 165
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
T G++ Y+ QG G+ + +S + P RP + +C YY+ TG CK+GA CKF
Sbjct: 107 TCKFGASCKYNHPKQG----GSSVRPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKF 162
Query: 175 HHPKERIAQSAASNIGP 191
HHP+ Q A ++ P
Sbjct: 163 HHPQPANMQIPAQSLAP 179
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R +E+ C YY+RTG C +G C+++HP+
Sbjct: 47 RPNEQDCMYYLRTGFCGYGARCRYNHPR 74
>gi|226530435|ref|NP_001147888.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
gi|195614408|gb|ACG29034.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
Length = 451
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 152/332 (45%), Gaps = 53/332 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLP---SSG 57
+R EK C YYM+TG CKFG CKFHHP+ LG G M V P SS
Sbjct: 134 LRLGEKECSYYMKTGHCKFGATCKFHHPE---LGFLTETPG------MYPPVQPPPISSS 184
Query: 58 LQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 116
Y L W + R P + S L G SY P+++ ++P GWN Y+ + ++P
Sbjct: 185 HPYP-HLANWQMGRPPVVPGSFLPG--SYPPMVLP--HTVIPMQGWNPYVPPMNQVTPAG 239
Query: 117 IAGSNLIYSSRNQGDLGAGAQMHILSASSQ---------------NLPERPDQPDCRYYM 161
+ + +S G + M S +Q PERP QP+C +YM
Sbjct: 240 GQQAVPVGASYGLSHQGPTSAMTYGSHYAQLYSSSGTSSSNIQEYAFPERPGQPECEHYM 299
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TGTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FD
Sbjct: 300 KTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQPCAYYAHHGYCKFGPTCKFD 359
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSD------ 275
HP + P SI SSL + S +P +P+++ +SD
Sbjct: 360 HP---------MGTPNYSISTSSLTDVPIAPYPQSFPVTP-----VPSYLPSSDLRPQYT 405
Query: 276 AVSVQHQNPDMKNSTTKNSDDSSKVDHPPHSV 307
V NP TT S + PH++
Sbjct: 406 QVKDSSANPPPSPGTTYGPVGSISKVYAPHTL 437
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA--QSAASNIGPLGLPSRPG 199
A + LPERP + DC YY+ TG C YG C+++HP++R A + P RPG
Sbjct: 34 EAGEEKLPERPGEADCAYYLRTGACGYGERCRYNHPRDRPAPVNGVGKTAVTVEYPERPG 93
Query: 200 QAICSNYSMYGICKFGPTCRFDHPYAG 226
Q +C Y+ G CKFG C+FDHP G
Sbjct: 94 QPLCEYYAKNGTCKFGSNCKFDHPREG 120
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 201
+A + PERP QP C YY GTCK+G++CKF HP+E N G G P R G+
Sbjct: 82 TAVTVEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPREGGFVPVTLNSG--GFPLRLGEK 139
Query: 202 ICSNYSMYGICKFGPTCRFDHPYAGY 227
CS Y G CKFG TC+F HP G+
Sbjct: 140 ECSYYMKTGHCKFGATCKFHHPELGF 165
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
T GSN + +G ++ +S P R + +C YYM TG CK+GA CKF
Sbjct: 105 TCKFGSNCKFDHPREGGFVP------VTLNSGGFPLRLGEKECSYYMKTGHCKFGATCKF 158
Query: 175 HHPK 178
HHP+
Sbjct: 159 HHPE 162
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
R+ G LP RPG+A C+ Y G C +G CR++HP
Sbjct: 25 RRLGLGDDGEAGEEKLPERPGEADCAYYLRTGACGYGERCRYNHP 69
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E C YY+RTG+C +G C+++HP+
Sbjct: 43 RPGEADCAYYLRTGACGYGERCRYNHPR 70
>gi|79516213|ref|NP_197356.2| zinc finger CCCH domain-containing protein 58 [Arabidopsis
thaliana]
gi|62901486|sp|Q6NPN3.1|C3H58_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 58;
Short=AtC3H58; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 3
gi|38603838|gb|AAR24664.1| At5g18550 [Arabidopsis thaliana]
gi|110740171|dbj|BAF01984.1| zinc finger like protein [Arabidopsis thaliana]
gi|332005195|gb|AED92578.1| zinc finger CCCH domain-containing protein 58 [Arabidopsis
thaliana]
Length = 465
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 126/232 (54%), Gaps = 15/232 (6%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C Y+MRTG CKFG C++HHP P G P S G ++ PS Q
Sbjct: 144 LRPGEKECSYFMRTGQCKFGSTCRYHHPVPP--GVQAPSQQQQQQLSAGPTMYPSLQSQT 201
Query: 61 AGSLPTWSLQRA-PYL--SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTS 116
S + + A P L S +Q Y +++ P G+VP GWN Y ++ + SP +
Sbjct: 202 VPSSQQYGVVLARPQLLPGSYVQSPYGYGQMVLPP--GMVPYSGWNPYQASVSAMPSPGT 259
Query: 117 --IAGSNLIYS----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 170
G++ +Y S + +G +S Q P+RP+QP+C+Y+M TG CK+G
Sbjct: 260 QPSMGTSSVYGITPLSPSAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGT 319
Query: 171 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
C+FHHP E A AS + +GLP RPG C++++ +GICKFGP C+FDH
Sbjct: 320 SCRFHHPME-AASPEASTLSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDH 370
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
+ PERPD+PDC YY+ TG C YG+ C+F+HP+ R P R GQ +C +
Sbjct: 46 ETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQH 105
Query: 206 YSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
+ G CKFG +C++ HP G G S+ P+S+
Sbjct: 106 FMRTGTCKFGASCKYHHPRQG---GGGDSVTPVSL 137
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS--NIGPLGLPSRP 198
L + PER QP C+++M TGTCK+GA CK+HHP++ + + ++ +G P RP
Sbjct: 87 LRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRP 146
Query: 199 GQAICSNYSMYGICKFGPTCRFDHP 223
G+ CS + G CKFG TCR+ HP
Sbjct: 147 GEKECSYFMRTGQCKFGSTCRYHHP 171
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 119 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
G++ Y QG G G + +S + P RP + +C Y+M TG CK+G+ C++HHP
Sbjct: 115 GASCKYHHPRQG--GGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPV 172
Query: 179 ERIAQSAAS------NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYG 232
Q+ + + GP PS Q + S+ YG+ P Y P YG
Sbjct: 173 PPGVQAPSQQQQQQLSAGPTMYPSLQSQTVPSS-QQYGVVLARPQL-LPGSYVQSPYGYG 230
Query: 233 -LSLPPLSILDSSLMNHQA-ISATHSIETSP 261
+ LPP + S +QA +SA S T P
Sbjct: 231 QMVLPPGMVPYSGWNPYQASVSAMPSPGTQP 261
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG C +G C+F+HP+
Sbjct: 51 RPDEPDCIYYLRTGVCGYGSRCRFNHPR 78
>gi|215767260|dbj|BAG99488.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 237
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 112/207 (54%), Gaps = 26/207 (12%)
Query: 47 SMGSSVLPS------SGLQYAGSLPTWSLQRAPYLSS-RLQGTQSYMPLIVSPSQGIVPA 99
S GS + PS +G Y G++ +W+ R ++ S R Q +Y P+IV QG+V
Sbjct: 4 SRGSPIYPSVHSSATAGPPYTGTMASWAFPRGSFIPSPRWQNPSNYAPMIVP--QGLVQV 61
Query: 100 PGWNTYMGNIGPLSPTSIA----GSNLIYSSRNQGDLGAGAQMHILSASSQN-------- 147
P WN+Y G + P+S + G+ Y + Q D AG Q + S +
Sbjct: 62 PSWNSYTGQMMPVSSSESRLQSPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYAL 121
Query: 148 -----LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
PERPDQP+C+YYM TG CK+GA CKFHHP+ R + + P+GLP RPG+ +
Sbjct: 122 QRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEEL 181
Query: 203 CSNYSMYGICKFGPTCRFDHPYAGYPI 229
C YS YGICKFG C+FDHP P+
Sbjct: 182 CKFYSRYGICKFGANCKFDHPTMAPPM 208
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 35
R D+ C YYM+TG CKFG CKFHHP+ S+ T
Sbjct: 130 RPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPT 163
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSV 52
+R E+ C +Y R G CKFG CKF HP T P G + GS ++V
Sbjct: 175 LRPGEELCKFYSRYGICKFGANCKFDHP------TMAPPMGVYAYGSASTNV 220
>gi|223948749|gb|ACN28458.1| unknown [Zea mays]
gi|224031379|gb|ACN34765.1| unknown [Zea mays]
gi|407232626|gb|AFT82655.1| C3H12 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414876866|tpg|DAA53997.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 3
[Zea mays]
Length = 451
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 151/331 (45%), Gaps = 51/331 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLP---SSG 57
+R EK C YYM+TG CKFG CKFHHP+ LG G M V P SS
Sbjct: 134 LRLGEKECSYYMKTGHCKFGATCKFHHPE---LGFLTETPG------MYPPVQPPPISSS 184
Query: 58 LQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 116
Y L W + R P + S L G SY P+++ ++P GWN Y+ + ++P
Sbjct: 185 HPYP-HLANWQMGRPPVVPGSFLPG--SYPPMVLP--HTVIPMQGWNPYVPPMNQVTPAG 239
Query: 117 IAGSNLIYSSRNQGDLGAGAQMHILSASSQ---------------NLPERPDQPDCRYYM 161
+ + +S G + M S +Q PERP QP+C +YM
Sbjct: 240 GQQAVPVGASYGLSHQGPTSAMTYGSHYAQLYSSSGTSSSNIQEYAFPERPGQPECEHYM 299
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TGTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FD
Sbjct: 300 KTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQPCAYYAHHGYCKFGPTCKFD 359
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSP-----DASSKIPNWVQNSDA 276
HP + P SI SSL + S +P +S P + Q D+
Sbjct: 360 HP---------MGTPNYSISTSSLTDVPIAPYPQSFPVTPMPSYLPSSDLRPQYTQVKDS 410
Query: 277 VSVQHQNPDMKNSTTKNSDDSSKVDHPPHSV 307
+ NP TT S + PH++
Sbjct: 411 SA----NPPPSPGTTYGPVGSISKVYAPHTL 437
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA--QSAASNIGPLGLPSRPG 199
A + LPERP + DC YY+ TG C YG C+++HP++R A + P RPG
Sbjct: 34 EAGEEKLPERPGEADCAYYLRTGACGYGERCRYNHPRDRPAPVNGVGKTAVTVEYPERPG 93
Query: 200 QAICSNYSMYGICKFGPTCRFDHPYAG 226
Q +C Y+ G CKFG C+FDHP G
Sbjct: 94 QPLCEYYAKNGTCKFGSNCKFDHPREG 120
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 201
+A + PERP QP C YY GTCK+G++CKF HP+E N G G P R G+
Sbjct: 82 TAVTVEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPREGGFVPVTLNSG--GFPLRLGEK 139
Query: 202 ICSNYSMYGICKFGPTCRFDHPYAGY 227
CS Y G CKFG TC+F HP G+
Sbjct: 140 ECSYYMKTGHCKFGATCKFHHPELGF 165
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
++ +S P R + +C YYM TG CK+GA CKFHHP+
Sbjct: 125 VTLNSGGFPLRLGEKECSYYMKTGHCKFGATCKFHHPE 162
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
R+ G LP RPG+A C+ Y G C +G CR++HP
Sbjct: 25 RRLGLGDDGEAGEEKLPERPGEADCAYYLRTGACGYGERCRYNHP 69
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E C YY+RTG+C +G C+++HP+
Sbjct: 43 RPGEADCAYYLRTGACGYGERCRYNHPR 70
>gi|356563888|ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 484
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 129/251 (51%), Gaps = 39/251 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPS---SLGTALPLTGNASLGSMGSSVLPSSG 57
+R EK C YY++TG CKFG CKFHHPQP+ +L + + + S + P+
Sbjct: 138 LRVAEKECSYYVKTGQCKFGATCKFHHPQPAGVQALAPSPVPPVSPLPVPVPSPMYPTVQ 197
Query: 58 LQYAGSLPTWSL--QRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGN----IG 110
+ S + + R P L S +QG Y P++VSP+ +VP GW+ Y +
Sbjct: 198 IPSGPSQQQYGVLVARPPMLPGSVVQG--PYGPMVVSPA--MVPFSGWSPYQAPATNPVL 253
Query: 111 PLSPTSIAGSNLIY------------------SSRNQGDLGAGAQMHILSASSQNLPERP 152
P S TS AGS Y S + G GA + H PERP
Sbjct: 254 PSSNTSNAGSTQFYGISQLPSSPATFTGPYQPSGSSIGPSGASQKEH-------PFPERP 306
Query: 153 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 212
DQP+C +YM TG CK+G C++HHP ++ A A + P+GLP RPG C++Y+ G+C
Sbjct: 307 DQPECHHYMKTGECKFGLSCRYHHPPDKSAPKATVTLSPVGLPLRPGAPPCTHYTQRGVC 366
Query: 213 KFGPTCRFDHP 223
KFG C+FDHP
Sbjct: 367 KFGSACKFDHP 377
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 13/101 (12%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
A +++ P RPD+ DC YY+ TG C YG C+F+HP++R A A+ P R GQ +
Sbjct: 39 AGAESYPMRPDEADCIYYLRTGFCGYGTRCRFNHPRDRAAVIGAAARTGGEFPERVGQPV 98
Query: 203 CSNYSMYGICKFGPTCRFDHP-------------YAGYPIN 230
C + G+CKFG +C++ HP Y GYP+
Sbjct: 99 CQYFMRTGLCKFGVSCKYHHPRQAAGTATPVPLNYYGYPLR 139
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP C+Y+M TG CK+G CK+HHP++ + + G P R + CS Y
Sbjct: 89 EFPERVGQPVCQYFMRTGLCKFGVSCKYHHPRQAAGTATPVPLNYYGYPLRVAEKECSYY 148
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 149 VKTGQCKFGATCKFHHP 165
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGN 42
R + C Y+MRTG CKFGV+CK+HHP+ + GTA P+ N
Sbjct: 93 RVGQPVCQYFMRTGLCKFGVSCKYHHPR-QAAGTATPVPLN 132
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
MR DE C YY+RTG C +G C+F+HP+
Sbjct: 46 MRPDEADCIYYLRTGFCGYGTRCRFNHPR 74
>gi|357129784|ref|XP_003566541.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform 1 [Brachypodium distachyon]
Length = 472
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 124/238 (52%), Gaps = 24/238 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YY++TG CKFG CKFHHP LG ++ S+ + SS L Y
Sbjct: 149 LRPGEKECSYYIKTGHCKFGSTCKFHHPDGPELGV---VSETPSMYPPAQPLPMSSPLTY 205
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG- 119
L +W L R L Q P +V PS ++P GWN YM ++ L+ S G
Sbjct: 206 P-PLASWQLGRPSVLPGSFY--QGSYPPMVHPS-AVIPMQGWNPYMSSMNQLA--SAGGQ 259
Query: 120 ----SNLIYSSRNQG---DLGAGAQMHILSASSQ-------NLPERPDQPDCRYYMNTGT 165
+ +Y +QG + G+ L +S+ PERP QP+C +YM TGT
Sbjct: 260 QNVQAGPLYGLSHQGPSSSVAYGSNYAPLPSSTWPSSNKQVAFPERPGQPECHHYMKTGT 319
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
CK+GA CK+ HP+ A ++ + PLGLP RPG C YS +G CKFGP C+FDHP
Sbjct: 320 CKFGATCKYSHPQYLSAPNSNCMLSPLGLPIRPGAQQCVYYSQHGFCKFGPRCKFDHP 377
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE-RIAQSA 185
R + GA+ I A PERP QP C YYM GTCK+G++CK++HP+E Q
Sbjct: 83 RAAAEFNGGARTTI--AMGVEYPERPGQPLCEYYMKNGTCKFGSNCKYNHPREGGPVQPV 140
Query: 186 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
A N G P RPG+ CS Y G CKFG TC+F HP
Sbjct: 141 ALNTS--GYPLRPGEKECSYYIKTGHCKFGSTCKFHHP 176
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGL--PSRP 198
++ LPERP + +C YY+ TG+C YG C+++HP++R A A +G+ P RP
Sbjct: 47 AAPRLPERPGEANCIYYLRTGSCSYGESCRYNHPRDRAAAEFNGGARTTIAMGVEYPERP 106
Query: 199 GQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 230
GQ +C Y G CKFG C+++HP G P+
Sbjct: 107 GQPLCEYYMKNGTCKFGSNCKYNHPREGGPVQ 138
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 53/176 (30%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E +C YY+RTGSC +G +C+++HP+ + A+ + G+ + G++Y
Sbjct: 54 RPGEANCIYYLRTGSCSYGESCRYNHPRDRA----------AAEFNGGARTTIAMGVEYP 103
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
P Q P YM N T GSN
Sbjct: 104 ----------------------------ERPGQ-----PLCEYYMKNG-----TCKFGSN 125
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
Y+ + G + ++ ++ P RP + +C YY+ TG CK+G+ CKFHHP
Sbjct: 126 CKYNHPRE-----GGPVQPVALNTSGYPLRPGEKECSYYIKTGHCKFGSTCKFHHP 176
>gi|357129786|ref|XP_003566542.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform 2 [Brachypodium distachyon]
Length = 472
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 124/238 (52%), Gaps = 24/238 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YY++TG CKFG CKFHHP LG ++ S+ + SS L Y
Sbjct: 149 LRPGEKECSYYIKTGHCKFGSTCKFHHPDGPELGV---VSETPSMYPPAQPLPMSSPLTY 205
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG- 119
L +W L R L Q P +V PS ++P GWN YM ++ L+ S G
Sbjct: 206 P-PLASWQLGRPSVLPGSFY--QGSYPPMVHPS-AVIPMQGWNPYMSSMNQLA--SAGGQ 259
Query: 120 ----SNLIYSSRNQG---DLGAGAQMHILSASSQ-------NLPERPDQPDCRYYMNTGT 165
+ +Y +QG + G+ L +S+ PERP QP+C +YM TGT
Sbjct: 260 QNVQAGPLYGLSHQGPSSSVAYGSNYAPLPSSTWPSSNKQVAFPERPGQPECHHYMKTGT 319
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
CK+GA CK+ HP+ A ++ + PLGLP RPG C YS +G CKFGP C+FDHP
Sbjct: 320 CKFGATCKYSHPQYLSAPNSNCMLSPLGLPIRPGAQQCVYYSQHGFCKFGPRCKFDHP 377
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
Query: 132 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE-RIAQSAASNIG 190
GA+ I A PERP QP C YYM GTCK+G++CK++HP+E Q A N
Sbjct: 88 FNGGARTTI--AMGVEYPERPGQPLCEYYMKNGTCKFGSNCKYNHPREGGPVQPVALNTS 145
Query: 191 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P RPG+ CS Y G CKFG TC+F HP
Sbjct: 146 --GYPLRPGEKECSYYIKTGHCKFGSTCKFHHP 176
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA--QSAASNIGPLGL--PSRPG 199
++ LPERP + +C YY+ TG+C YG C+++HP++R A A +G+ P RPG
Sbjct: 48 AAPRLPERPGEANCIYYLRTGSCSYGESCRYNHPRDRAAAFNGGARTTIAMGVEYPERPG 107
Query: 200 QAICSNYSMYGICKFGPTCRFDHPYAGYPIN 230
Q +C Y G CKFG C+++HP G P+
Sbjct: 108 QPLCEYYMKNGTCKFGSNCKYNHPREGGPVQ 138
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 54/176 (30%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E +C YY+RTGSC +G +C+++HP+ A+ + G+ + G++Y
Sbjct: 55 RPGEANCIYYLRTGSCSYGESCRYNHPR-----------DRAAAFNGGARTTIAMGVEYP 103
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
P Q P YM N T GSN
Sbjct: 104 ----------------------------ERPGQ-----PLCEYYMKNG-----TCKFGSN 125
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
Y+ +G + ++ ++ P RP + +C YY+ TG CK+G+ CKFHHP
Sbjct: 126 CKYNHPREG-----GPVQPVALNTSGYPLRPGEKECSYYIKTGHCKFGSTCKFHHP 176
>gi|145331437|ref|NP_001078077.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|330255804|gb|AEC10898.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
Length = 442
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 129/250 (51%), Gaps = 32/250 (12%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA---LPLTGNASLGSMGSSVLPSSGL 58
R E C +Y++TG+CKFG +CKFHHP+ + + L + G G++V P
Sbjct: 90 RFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREPAGTTVPPPPAS 149
Query: 59 --------------QYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNT 104
QY G + + R S +QG +Y P++++P G+VP PGW+
Sbjct: 150 APQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQG--AYGPMLLTP--GVVPIPGWSP 205
Query: 105 YMGNIGP-LSP--------TSIAGSNLIYSSRNQ--GDLGAGAQMHILSASSQNLPERPD 153
Y + P LSP TS+ G + S+ G + + + Q PERP
Sbjct: 206 YSAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPG 265
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
+P+C+YY+ TG CK+G CKFHHP++R+ A + P+GLP RPG C+ Y G CK
Sbjct: 266 EPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCK 325
Query: 214 FGPTCRFDHP 223
FG TC+FDHP
Sbjct: 326 FGSTCKFDHP 335
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 131 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 190
D G M L S + PERP PDC YYM TG C YG C+++HP++R S + +
Sbjct: 25 DTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRA--SVEATVR 82
Query: 191 PLG-LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R G+ C Y G CKFG +C+F HP
Sbjct: 83 ATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHP 116
>gi|356521891|ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 484
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 128/248 (51%), Gaps = 33/248 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT-------ALPLTGNASLGSMGSSVL 53
+R +K C YY++TG CKFG CKFHHPQP+ + + M +V
Sbjct: 138 LRVGQKECSYYVKTGQCKFGATCKFHHPQPAGVQVLAPSPVPPVSPLPVPVPSPMYPTVH 197
Query: 54 PSSG--LQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGN-- 108
P SG Q G L + R P L S +QG Y P++VSP+ +VP GW+ Y
Sbjct: 198 PPSGPSQQQYGVL----VARPPMLPGSVVQG--PYGPMVVSPT--MVPFSGWSPYQAPAT 249
Query: 109 --IGPLSPTSIAGSNLIYSSRNQGDLGA---------GAQMHILSASSQN--LPERPDQP 155
+ P S TS GS +Y A G+ + AS + PERPDQP
Sbjct: 250 NPLLPSSTTSNVGSTQLYGITQLPSSAATYTGPYQPSGSSIGPSGASQKEHPFPERPDQP 309
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
+C +YM TG CK+G C++HHP ++ A A + P+GLP RPG C++Y+ G+CKFG
Sbjct: 310 ECHHYMKTGDCKFGPLCRYHHPPDKSAPKANVTLSPVGLPLRPGAPPCTHYTQRGVCKFG 369
Query: 216 PTCRFDHP 223
C+FDHP
Sbjct: 370 SACKFDHP 377
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 47/77 (61%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
PER QP C+YYM TG+CK+GA CK+HHP++ + + G P R GQ CS Y
Sbjct: 89 EFPERVGQPVCQYYMRTGSCKFGASCKYHHPRQVPGTATPVPLNYYGYPLRVGQKECSYY 148
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 149 VKTGQCKFGATCKFHHP 165
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 204
+++ P RPD+ DC YY+ TG C YG C+F+HP++R A A+ P R GQ +C
Sbjct: 41 AESYPMRPDEADCIYYLRTGFCGYGTRCRFNHPRDRAAVIGAAPRTGGEFPERVGQPVCQ 100
Query: 205 NYSMYGICKFGPTCRFDHP-------------YAGYPINYG 232
Y G CKFG +C++ HP Y GYP+ G
Sbjct: 101 YYMRTGSCKFGASCKYHHPRQVPGTATPVPLNYYGYPLRVG 141
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQP-SSLGTALPLTGNASLGSMGSSV 52
MR DE C YY+RTG C +G C+F+HP+ +++ A P TG +G V
Sbjct: 46 MRPDEADCIYYLRTGFCGYGTRCRFNHPRDRAAVIGAAPRTGGEFPERVGQPV 98
>gi|242083372|ref|XP_002442111.1| hypothetical protein SORBIDRAFT_08g012360 [Sorghum bicolor]
gi|241942804|gb|EES15949.1| hypothetical protein SORBIDRAFT_08g012360 [Sorghum bicolor]
Length = 537
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 121/230 (52%), Gaps = 15/230 (6%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSS 56
+R EK CPYYMRTGSCKF CKFHHP P++ + P + L ++ S PS
Sbjct: 292 LRPGEKECPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENADTPLQNVQGSCQPS- 350
Query: 57 GLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTY-MGNIGPLSPT 115
LQ T + Q P+L+ QSY +V P QG+ P+P W+ Y + P P
Sbjct: 351 -LQIWPDHRTLNEQHVPFLAP----AQSYGGGMV-PPQGMYPSPDWSGYHQVPLNPYYPP 404
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+ + + N A S PERP QP+C++++ +G CKY C+FH
Sbjct: 405 GVPFPHFPAAHMNHPMYKAADVPGNQPPPSDEYPERPGQPECQHFIKSGFCKYRMKCRFH 464
Query: 176 HPKERIAQSA-ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
HP R QSA + + P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 465 HP--RSGQSAPLTGLSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 512
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 110/279 (39%), Gaps = 44/279 (15%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP----QPSSLGTALPLTGNASLGSMGSSVLPSSG 57
R E C YY++ G+C+FG+ CKF+HP + S + + + + S P
Sbjct: 104 RPGEPDCSYYLKFGTCRFGIKCKFNHPARKKKSSRVRGSGSNSSSNKASSPDDDQAPRE- 162
Query: 58 LQYAGSLPTWSL-----QRAPYLSSRLQGTQSYMPL-----IVSPSQGIVPAPGWNTYMG 107
+Y G +P S + SS + SY + + P + I P Y
Sbjct: 163 -EYEGLVPDISDSMGFDDKGSLSSSEIYRKMSYEVIDMERGKLEPKEKICEEPEKGIYFM 221
Query: 108 NIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 167
+ + T+ G+ + E Q +C+YY +G CK
Sbjct: 222 KLDETNITTQKGAK--------------------DKRKETFAEGNAQEECKYYSTSGGCK 261
Query: 168 YGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
+G CK+ H KE + + + LGLP RPG+ C Y G CKF C+F HP
Sbjct: 262 FGKACKYLHREGKEAKTEVEKAELNFLGLPLRPGEKECPYYMRTGSCKFATNCKFHHP-- 319
Query: 226 GYPINYGLSLPPL--SILDSSLMNHQAISATHSIETSPD 262
P N P L D+ L N Q S S++ PD
Sbjct: 320 -DPTNASSKEPGLEHENADTPLQNVQG-SCQPSLQIWPD 356
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 184
P RP +PDC YY+ GTC++G CKF+HP + S
Sbjct: 100 RFPRRPGEPDCSYYLKFGTCRFGIKCKFNHPARKKKSS 137
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 192 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
L P RPG+ CS Y +G C+FG C+F+HP
Sbjct: 99 LRFPRRPGEPDCSYYLKFGTCRFGIKCKFNHP 130
>gi|449524278|ref|XP_004169150.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like,
partial [Cucumis sativus]
Length = 403
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 124/245 (50%), Gaps = 31/245 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG-------TALPLTGNASLGSMGSSVL 53
+R EK C YY++ G CKFG CKFHHP+P+ L P+ G S+ V
Sbjct: 60 LRPGEKECSYYLKNGQCKFGATCKFHHPEPAGLQFPAPSPVQVAPIAGQVPAPSVYPPVQ 119
Query: 54 -PS--SGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIG 110
PS S QY L SL PY+ Y P++VSP G+V P W+ Y +
Sbjct: 120 SPSAHSSQQYGVILARPSLLSNPYVPG------PYGPMLVSP--GVVQFPSWSPYPAPMS 171
Query: 111 PLSPTSI---AGSNLIY-----SSRNQGDLGAGAQMHILSASS-----QNLPERPDQPDC 157
P++ S GS +Y S G G+ M SS + PERP QP+C
Sbjct: 172 PVASPSAQPSVGSGPLYGMAHVSPSASGFAGSYQPMPSTGPSSTSQKEHSFPERPGQPEC 231
Query: 158 RYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
+YYM TG CK+G+ C++HHP E + + + LGLP RPG C+++ G+CKFGP
Sbjct: 232 QYYMRTGDCKFGSSCRYHHPPELVTSRPSVVLSQLGLPLRPGAPPCTHFMQRGMCKFGPA 291
Query: 218 CRFDH 222
C+FDH
Sbjct: 292 CKFDH 296
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
+ PER QP C+YYM TG CK+GA CK+HHP++ + ++ G P RPG+ CS
Sbjct: 10 REYPERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPGEKECSY 69
Query: 206 YSMYGICKFGPTCRFDHP 223
Y G CKFG TC+F HP
Sbjct: 70 YLKNGQCKFGATCKFHHP 87
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 141 LSASSQNL---PERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
LS S N P RP + +C YY+ G CK+GA CKFHHP+
Sbjct: 48 LSPVSLNFYGYPLRPGEKECSYYLKNGQCKFGATCKFHHPE 88
>gi|226499720|ref|NP_001150792.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
gi|195638922|gb|ACG38929.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
gi|195641882|gb|ACG40409.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
Length = 447
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 137/269 (50%), Gaps = 40/269 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYM+TG CKFG CKFHHP+ LG G M V PS +
Sbjct: 131 LRLGEKECSYYMKTGHCKFGGTCKFHHPE---LGFLTETPG------MYPPVQPSP-ISS 180
Query: 61 AGSLP---TWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 116
P W + R + S L G Y P+++ P+ ++P GWN Y + P++ T+
Sbjct: 181 PHPYPHHSNWQMGRPAVVPGSFLPG--PYPPMMLPPT--VMPMQGWNPY---VSPMNQTT 233
Query: 117 IAGSNLI------YSSRNQGDLGAG------AQMHILSASSQNL-----PERPDQPDCRY 159
AG Y +Q A AQ++ SS N+ PERP QP+C +
Sbjct: 234 PAGGQQAVPAGPSYGLSHQEPTSAVTYGSHYAQLYSSGTSSSNIQEYVFPERPGQPECEH 293
Query: 160 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCR 219
YM TGTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+
Sbjct: 294 YMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQRCAYYAHHGFCKFGPTCK 353
Query: 220 FDHPYAGYPINYGLSLPPLSILDSSLMNH 248
FDHP G P NY L P L+ L + H
Sbjct: 354 FDHP-MGTP-NYSLPAPSLTDLPVAPYPH 380
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
S AG+ L S R G LG + A + LPERP + DC YY+ TG C YG C+++
Sbjct: 12 SDAGTGLEESMRKLG-LGEDDE-----AGEEKLPERPGEADCAYYLRTGACGYGERCRYN 65
Query: 176 HPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
HP++R A + + P RPGQ +C Y+ G CKFG C+FDHP
Sbjct: 66 HPRDRPAPVNGVGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHP 114
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 140 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 199
+ + PERP QP C YY GTCK+G++CKF HP+E A N G P R G
Sbjct: 77 VGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRESGFVPVALNNS--GFPLRLG 134
Query: 200 QAICSNYSMYGICKFGPTCRFDHPYAGY 227
+ CS Y G CKFG TC+F HP G+
Sbjct: 135 EKECSYYMKTGHCKFGGTCKFHHPELGF 162
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E C YY+RTG+C +G C+++HP+
Sbjct: 41 RPGEADCAYYLRTGACGYGERCRYNHPR 68
>gi|449432823|ref|XP_004134198.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Cucumis sativus]
Length = 481
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 124/245 (50%), Gaps = 31/245 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG-------TALPLTGNASLGSMGSSVL 53
+R EK C YY++ G CKFG CKFHHP+P+ L P+ G S+ V
Sbjct: 138 LRPGEKECSYYLKNGQCKFGATCKFHHPEPAGLQFPAPSPVQVAPIAGQVPAPSVYPPVQ 197
Query: 54 -PS--SGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIG 110
PS S QY L SL PY+ Y P++VSP G+V P W+ Y +
Sbjct: 198 SPSAHSSQQYGVILARPSLLSNPYVPG------PYGPMLVSP--GVVQFPSWSPYPAPMS 249
Query: 111 PLSPTSI---AGSNLIY-----SSRNQGDLGAGAQMHILSASS-----QNLPERPDQPDC 157
P++ S GS +Y S G G+ M SS + PERP QP+C
Sbjct: 250 PVASPSAQPSVGSGPLYGMAHVSPSASGFAGSYQPMPSTGPSSTSQKEHSFPERPGQPEC 309
Query: 158 RYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
+YYM TG CK+G+ C++HHP E + + + LGLP RPG C+++ G+CKFGP
Sbjct: 310 QYYMRTGDCKFGSSCRYHHPPELVTSRPSVVLSQLGLPLRPGAPPCTHFMQRGMCKFGPA 369
Query: 218 CRFDH 222
C+FDH
Sbjct: 370 CKFDH 374
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
+ PER QP C+YYM TG CK+GA CK+HHP++ + ++ G P RPG+ CS
Sbjct: 88 REYPERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPGEKECSY 147
Query: 206 YSMYGICKFGPTCRFDHP 223
Y G CKFG TC+F HP
Sbjct: 148 YLKNGQCKFGATCKFHHP 165
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 201
S + PERPD+ DC YY+ TG C YG+ C+F+HP+ER S G P R GQ
Sbjct: 38 SRDRDSYPERPDEADCIYYLRTGFCGYGSRCRFNHPRERTPALGGSRPGGREYPERIGQP 97
Query: 202 ICSNYSMYGICKFGPTCRFDHP 223
+C Y G+CKFG +C++ HP
Sbjct: 98 VCQYYMRTGMCKFGASCKYHHP 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 141 LSASSQNL---PERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
LS S N P RP + +C YY+ G CK+GA CKFHHP+
Sbjct: 126 LSPVSLNFYGYPLRPGEKECSYYLKNGQCKFGATCKFHHPE 166
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG C +G C+F+HP+
Sbjct: 47 RPDEADCIYYLRTGFCGYGSRCRFNHPR 74
>gi|326489471|dbj|BAK01716.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 130/245 (53%), Gaps = 14/245 (5%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R K CPYYMRTGSCKF C+FHHP P+++ + PL + + +V SS L
Sbjct: 242 LRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQASSQL-- 299
Query: 61 AGSLPTWSLQRAPYLSSR---LQGTQSYMPLIVSPSQGIVPAPGWNTYMGN-IGPLSPTS 116
++P WS + R L SY ++ P +G+ P+ W+ Y +GP
Sbjct: 300 --NVPLWSADQRALNEHRVPSLAPAPSYSAGMIPP-RGMYPSSEWSGYHQVPLGPYYTPG 356
Query: 117 IAGSNLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
I+ + N GA Q H S PERP +P+C++++ +G CK+ CK+H
Sbjct: 357 ISFHHFPAPPVNHPMYRGADVQGH-QELPSDEYPERPGEPECQHFVKSGFCKFKVKCKYH 415
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYGLS 234
HP+ + A PLGLP RP Q +C+ Y YG+CKFGP C ++HP+ G+P++ +
Sbjct: 416 HPRSLVPPPTARAFSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVS--AA 473
Query: 235 LPPLS 239
PPLS
Sbjct: 474 GPPLS 478
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
Q +C+YY G CK+G C++ H KER + A + LGLP RPG C Y G
Sbjct: 198 QEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMRTGS 257
Query: 212 CKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWV 271
CKF CRF HP P N +S PL ++ + Q + A+ + +P W
Sbjct: 258 CKFATNCRFHHP---DPTNV-VSRDPLLEHENGDIPQQNVQASSQL--------NVPLWS 305
Query: 272 QNSDAVSVQHQNPDM 286
+ A++ +H+ P +
Sbjct: 306 ADQRALN-EHRVPSL 319
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 117 IAGSNLIYSSRNQGDLGAGAQMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFH 175
IAGS+ G++ G + +A S+ P+R +PDC YY+ GTC++G CKF+
Sbjct: 64 IAGSD-----ETTGEITGGKVQPVETADSRPRFPQRHAEPDCTYYLKFGTCRFGMKCKFN 118
Query: 176 HPKER 180
HP +
Sbjct: 119 HPARK 123
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP +C YYM TG+CK+ +C+FHHP
Sbjct: 240 LPLRPGGKECPYYMRTGSCKFATNCRFHHP 269
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY++ G+C+FG+ CKF+HP
Sbjct: 94 RHAEPDCTYYLKFGTCRFGMKCKFNHP 120
>gi|77554315|gb|ABA97111.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 508
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 122/244 (50%), Gaps = 33/244 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPL----TGNASLGSM-GSSVLPS 55
+R EK CPYYMRTGSCK+ CKFHHP PS++ + P G+A + GSS P+
Sbjct: 263 LRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPN 322
Query: 56 SGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVS---------PSQGIVPAPGWNTY- 105
+ + W QR + ++P I P QG+ P P WN Y
Sbjct: 323 ASI--------WPDQRT--------VNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYH 366
Query: 106 MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 165
+ P P + + + N A S+ PERP QP+C++++ +G
Sbjct: 367 QVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGF 426
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
CK+ CK+HHP+ + + A + PLGLP +P Q +C+ Y YG+CKFGP C ++HP+
Sbjct: 427 CKFRMKCKYHHPRSPVPPAGA--LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFN 484
Query: 226 GYPI 229
P+
Sbjct: 485 FSPV 488
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
Q +C+YY G CK+G CK+ H KE + ++ LGLP RPG+ C Y G
Sbjct: 219 QEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGS 278
Query: 212 CKFGPTCRFDHP 223
CK+ C+F HP
Sbjct: 279 CKYATNCKFHHP 290
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP + +C YYM TG+CKY +CKFHHP
Sbjct: 261 LPLRPGEKECPYYMRTGSCKYATNCKFHHP 290
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY++ GSC+FG+ CKF+HP
Sbjct: 108 RPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ C+ Y +G C+FG C+F+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>gi|218186661|gb|EEC69088.1| hypothetical protein OsI_37978 [Oryza sativa Indica Group]
Length = 529
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 122/244 (50%), Gaps = 33/244 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPL----TGNASLGSM-GSSVLPS 55
+R EK CPYYMRTGSCK+ CKFHHP PS++ + P G+A + GSS P+
Sbjct: 284 LRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPN 343
Query: 56 SGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVS---------PSQGIVPAPGWNTY- 105
+ + W QR + ++P I P QG+ P P WN Y
Sbjct: 344 ASI--------WPDQRT--------VNEHHLPFIAPSPSYSAGMLPPQGMYPPPEWNGYH 387
Query: 106 MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 165
+ P P + + + N A S+ PERP QP+C++++ +G
Sbjct: 388 QVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGF 447
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
CK+ CK+HHP+ + + A + PLGLP +P Q +C+ Y YG+CKFGP C ++HP+
Sbjct: 448 CKFRMKCKYHHPRSPVPPAGA--LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFN 505
Query: 226 GYPI 229
P+
Sbjct: 506 FSPV 509
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
Q +C+YY G CK+G CK+ H KE + ++ LGLP RPG+ C Y G
Sbjct: 240 QEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGS 299
Query: 212 CKFGPTCRFDHP 223
CK+ C+F HP
Sbjct: 300 CKYATNCKFHHP 311
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 96 IVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQ-NLPERPD 153
++P P GW P +AG + + G++ + + +A S+ P RP
Sbjct: 59 LLPKPTGWED--------GPVVVAGDEVSGGEKLPGEVASAVGVEGAAADSRPRFPRRPG 110
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKER 180
+PDC YY+ G+C++G CKF+HP +
Sbjct: 111 EPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP + +C YYM TG+CKY +CKFHHP
Sbjct: 282 LPLRPGEKECPYYMRTGSCKYATNCKFHHP 311
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 179 ERIAQSAASNIGPLG--------LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
E++ AS +G G P RPG+ C+ Y +G C+FG C+F+HP
Sbjct: 82 EKLPGEVASAVGVEGAAADSRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY++ GSC+FG+ CKF+HP
Sbjct: 108 RPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>gi|115488164|ref|NP_001066569.1| Os12g0278800 [Oryza sativa Japonica Group]
gi|122204937|sp|Q2QTY2.1|C3H65_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 65;
Short=OsC3H65
gi|77554313|gb|ABA97109.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
gi|113649076|dbj|BAF29588.1| Os12g0278800 [Oryza sativa Japonica Group]
Length = 529
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 122/244 (50%), Gaps = 33/244 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPL----TGNASLGSM-GSSVLPS 55
+R EK CPYYMRTGSCK+ CKFHHP PS++ + P G+A + GSS P+
Sbjct: 284 LRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPN 343
Query: 56 SGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVS---------PSQGIVPAPGWNTY- 105
+ + W QR + ++P I P QG+ P P WN Y
Sbjct: 344 ASI--------WPDQRT--------VNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYH 387
Query: 106 MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 165
+ P P + + + N A S+ PERP QP+C++++ +G
Sbjct: 388 QVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGF 447
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
CK+ CK+HHP+ + + A + PLGLP +P Q +C+ Y YG+CKFGP C ++HP+
Sbjct: 448 CKFRMKCKYHHPRSPVPPAGA--LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFN 505
Query: 226 GYPI 229
P+
Sbjct: 506 FSPV 509
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
Q +C+YY G CK+G CK+ H KE + ++ LGLP RPG+ C Y G
Sbjct: 240 QEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGS 299
Query: 212 CKFGPTCRFDHP 223
CK+ C+F HP
Sbjct: 300 CKYATNCKFHHP 311
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP + +C YYM TG+CKY +CKFHHP
Sbjct: 282 LPLRPGEKECPYYMRTGSCKYATNCKFHHP 311
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY++ GSC+FG+ CKF+HP
Sbjct: 108 RPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ C+ Y +G C+FG C+F+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>gi|77554314|gb|ABA97110.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
gi|215767051|dbj|BAG99279.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616906|gb|EEE53038.1| hypothetical protein OsJ_35760 [Oryza sativa Japonica Group]
Length = 528
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 122/244 (50%), Gaps = 33/244 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPL----TGNASLGSM-GSSVLPS 55
+R EK CPYYMRTGSCK+ CKFHHP PS++ + P G+A + GSS P+
Sbjct: 283 LRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPN 342
Query: 56 SGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVS---------PSQGIVPAPGWNTY- 105
+ + W QR + ++P I P QG+ P P WN Y
Sbjct: 343 ASI--------WPDQRT--------VNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYH 386
Query: 106 MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 165
+ P P + + + N A S+ PERP QP+C++++ +G
Sbjct: 387 QVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGF 446
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
CK+ CK+HHP+ + + A + PLGLP +P Q +C+ Y YG+CKFGP C ++HP+
Sbjct: 447 CKFRMKCKYHHPRSPVPPAGA--LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFN 504
Query: 226 GYPI 229
P+
Sbjct: 505 FSPV 508
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
Q +C+YY G CK+G CK+ H KE + ++ LGLP RPG+ C Y G
Sbjct: 239 QEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGS 298
Query: 212 CKFGPTCRFDHP 223
CK+ C+F HP
Sbjct: 299 CKYATNCKFHHP 310
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP + +C YYM TG+CKY +CKFHHP
Sbjct: 281 LPLRPGEKECPYYMRTGSCKYATNCKFHHP 310
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY++ GSC+FG+ CKF+HP
Sbjct: 108 RPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ C+ Y +G C+FG C+F+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>gi|226499050|ref|NP_001140642.1| hypothetical protein [Zea mays]
gi|194700310|gb|ACF84239.1| unknown [Zea mays]
gi|407232622|gb|AFT82653.1| C3H54 transcription factor, partial [Zea mays subsp. mays]
gi|413916358|gb|AFW56290.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 544
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 118/229 (51%), Gaps = 12/229 (5%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSS 56
+R EK CPYYMRTGSCKF CKFHHP P++ + P G+ L ++ S PS
Sbjct: 299 LRPGEKECPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPS- 357
Query: 57 GLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTY-MGNIGPLSPT 115
LQ + Q P+L+ SY +V P QG+ P+ W+ Y + P P
Sbjct: 358 -LQMWPDQRALNEQHVPFLAP----APSYSGGMVPP-QGMYPSSDWSGYHQVPLNPYYPP 411
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+ + + N A S PERP QP+C++++ +G CKY C++H
Sbjct: 412 GVPFPHFPAAHMNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYH 471
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
HP+ R + + + P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 472 HPRSRQSAPPPAGLSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 520
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 19/231 (8%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP---QPSSLGTALPLTGNASLGSMGSSVLPSSGL 58
R E C YY++ G+C+FG+ CKF+HP + +S + G+ S S + P
Sbjct: 106 RPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGVGSNGSGSNSSSNKASSPDDDQ 165
Query: 59 ----QYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 114
+Y G +P S L ++++ + S ++ + G + P
Sbjct: 166 APKEEYEGLVPDISDSMGFDDKGSLSSSENHRNM----SYEVI-----DMKRGKLEPKEK 216
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
I+ ++ + Q + E Q +C+YY G CK+G CK+
Sbjct: 217 VCEEPEKAIHFTKLD-ETNIATQKGSKDKRKETFAEGNTQEECKYYSTPGGCKFGKTCKY 275
Query: 175 HHPKERIAQSAA--SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
H + ++ + + LGLP RPG+ C Y G CKF C+F HP
Sbjct: 276 LHREGNGGKTEVEKAELNFLGLPLRPGEKECPYYMRTGSCKFATNCKFHHP 326
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 95 GIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS-------SQ 146
G P P GW+ GP+ P I L+ GD GAG + + +
Sbjct: 53 GGFPEPSGWDD-----GPV-PVPIPADVLV-----GGDEGAGEKPRAPAPAPTGAVDVKV 101
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 189
P RP +PDC YY+ GTC++G CKF+HP + S +
Sbjct: 102 RFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGV 144
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ CS Y +G C+FG C+F+HP
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHP 132
>gi|226491251|ref|NP_001151211.1| zinc finger CCCH type domain-containing protein ZFN-like 6 [Zea
mays]
gi|195645032|gb|ACG41984.1| zinc finger CCCH type domain-containing protein ZFN-like 6 [Zea
mays]
gi|413916355|gb|AFW56287.1| zinc finger CCCH type domain-containing protein ZFN-like 6 [Zea
mays]
Length = 524
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 118/229 (51%), Gaps = 12/229 (5%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSS 56
+R EK CPYYMRTGSCKF CKFHHP P++ + P G+ L ++ S PS
Sbjct: 279 LRPGEKECPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPS- 337
Query: 57 GLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTY-MGNIGPLSPT 115
LQ + Q P+L+ SY +V P QG+ P+ W+ Y + P P
Sbjct: 338 -LQMWPDQRALNEQHVPFLAP----APSYSGGMVPP-QGMYPSSDWSGYHQVPLNPYYPP 391
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+ + + N A S PERP QP+C++++ +G CKY C++H
Sbjct: 392 GVPFPHFPAAHMNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYH 451
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
HP+ R + + + P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 452 HPRSRQSAPPPAGLSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 500
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 87/224 (38%), Gaps = 25/224 (11%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E C YY++ G+C+FG+ CKF+HP + + G S +
Sbjct: 106 RPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRV----------RGVGSNGSGSNSSS 155
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
+ +AP + Y L+ S +V + G + P
Sbjct: 156 NKASSPDDDQAP--------KEEYEGLVPDISDSMV----IDMKRGKLEPKEKVCEEPEK 203
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 181
I+ ++ + Q + E Q +C+YY G CK+G CK+ H +
Sbjct: 204 AIHFTKLD-ETNIATQKGSKDKRKETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGNG 262
Query: 182 AQSAA--SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
++ + + LGLP RPG+ C Y G CKF C+F HP
Sbjct: 263 GKTEVEKAELNFLGLPLRPGEKECPYYMRTGSCKFATNCKFHHP 306
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 95 GIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS-------SQ 146
G P P GW+ GP+ P I L+ GD GAG + + +
Sbjct: 53 GGFPEPSGWDD-----GPV-PVPIPADVLV-----GGDEGAGEKPRAPAPAPTGAVDVKV 101
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 189
P RP +PDC YY+ GTC++G CKF+HP + S +
Sbjct: 102 RFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGV 144
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ CS Y +G C+FG C+F+HP
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHP 132
>gi|224032427|gb|ACN35289.1| unknown [Zea mays]
gi|413916356|gb|AFW56288.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 527
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 118/229 (51%), Gaps = 12/229 (5%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSS 56
+R EK CPYYMRTGSCKF CKFHHP P++ + P G+ L ++ S PS
Sbjct: 282 LRPGEKECPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPS- 340
Query: 57 GLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTY-MGNIGPLSPT 115
LQ + Q P+L+ SY +V P QG+ P+ W+ Y + P P
Sbjct: 341 -LQMWPDQRALNEQHVPFLAP----APSYSGGMVPP-QGMYPSSDWSGYHQVPLNPYYPP 394
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+ + + N A S PERP QP+C++++ +G CKY C++H
Sbjct: 395 GVPFPHFPAAHMNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYH 454
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
HP+ R + + + P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 455 HPRSRQSAPPPAGLSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 503
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 36/231 (15%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP---QPSSLGTALPLTGNASLGSMGSSVLPSSGL 58
R E C YY++ G+C+FG+ CKF+HP + +S + G+ S S + P
Sbjct: 106 RPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGVGSNGSGSNSSSNKASSPDDDQ 165
Query: 59 ----QYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSP 114
+Y G +P S + + + + P + I + L
Sbjct: 166 APKEEYEGLVPDISDSMV--IDMKRGKLEPKEKVCEEPEKAI-----------HFTKLDE 212
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
T+IA ++ S+++ + E Q +C+YY G CK+G CK+
Sbjct: 213 TNIATQKVLKGSKDK--------------RKETFAEGNTQEECKYYSTPGGCKFGKTCKY 258
Query: 175 HHPKERIAQSAA--SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
H + ++ + + LGLP RPG+ C Y G CKF C+F HP
Sbjct: 259 LHREGNGGKTEVEKAELNFLGLPLRPGEKECPYYMRTGSCKFATNCKFHHP 309
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 95 GIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS-------SQ 146
G P P GW+ GP+ P I L+ GD GAG + + +
Sbjct: 53 GGFPEPSGWDD-----GPV-PVPIPADVLV-----GGDEGAGEKPRAPAPAPTGAVDVKV 101
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 189
P RP +PDC YY+ GTC++G CKF+HP + S +
Sbjct: 102 RFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGV 144
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ CS Y +G C+FG C+F+HP
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHP 132
>gi|30685903|ref|NP_851041.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
gi|62901381|sp|Q8L7N8.2|C3H57_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 57;
Short=AtC3H57; AltName: Full=Zinc finger type
domain-containing protein ZFN3
gi|332004925|gb|AED92308.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
Length = 375
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 139/291 (47%), Gaps = 57/291 (19%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C Y++R G CKFG CKF+HPQ S N + GS V S LQ
Sbjct: 132 LRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQST--------NLMVSVRGSPVY--SALQS 181
Query: 61 AGSLPTWSLQRAPYLSS--RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
P++S R ++++ RLQ + S SQG + + G+++ GN PL ++
Sbjct: 182 LTGQPSYSWSRTSFVANPPRLQDPSGF----ASGSQGGLFSSGFHS--GNSVPLGFYALP 235
Query: 119 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
N+ PERP QP+C++YM TG CK+G CKFHHP+
Sbjct: 236 RENV-------------------------FPERPGQPECQFYMKTGDCKFGTVCKFHHPR 270
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPL 238
+R + +GLP RPG+ +C YS YGICKFGP+C+FDHP + N + P
Sbjct: 271 DRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSP 330
Query: 239 SILDSSLMNHQAIS-------ATHSIETSPDASSKIPNWVQNSDA-VSVQH 281
S SSL AI+ + S+E P + +P D V QH
Sbjct: 331 S---SSLHQETAITTELRNLLVSSSVEAKP---TSLPETTSAKDTIVDAQH 375
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PER QP+C +Y+ TGTCK+G CKFHHP+ + + ++ L P RP + CS +
Sbjct: 85 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLR 144
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F+HP
Sbjct: 145 IGQCKFGGTCKFNHP 159
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 129 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 188
Q +LG+ M + + PER +PDC YY+ TG C++G+ C+F+HP +R A +
Sbjct: 24 QMNLGSDDTMGV----DGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATAR 79
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
I P R GQ C Y G CKFG TC+F HP I+ +S+ LS
Sbjct: 80 IKG-EYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLS 129
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
RN+ + +++LS P RP++ DC Y++ G CK+G CKF+HP+
Sbjct: 114 RNKAGIDGSVSVNVLS-----YPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQ 160
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG C+F+HP L A
Sbjct: 42 RHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIA 76
>gi|297596471|ref|NP_001042632.2| Os01g0257400 [Oryza sativa Japonica Group]
gi|62901483|sp|Q5NAV3.1|C3H5_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 5;
Short=OsC3H5; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 3
gi|56783956|dbj|BAD81393.1| putative floral homeotic protein HUA1 [Oryza sativa Japonica Group]
gi|215707250|dbj|BAG93710.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673074|dbj|BAF04546.2| Os01g0257400 [Oryza sativa Japonica Group]
Length = 466
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 139/273 (50%), Gaps = 56/273 (20%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLP---SSG 57
+R EK C YY++TG CKFG CKFHHP+ + G + +M V P SS
Sbjct: 144 LRSGEKDCTYYVKTGHCKFGSTCKFHHPE---------IGGVSETPNMYPPVQPQPISSS 194
Query: 58 LQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 116
Y L W + R P L S L G SY P+++ PS +VP GWN Y I P++ +
Sbjct: 195 HPYQ-HLAGWQMGRPPVLPGSFLSG--SYPPMML-PST-VVPMQGWNPY---ISPVNQVA 246
Query: 117 IAGSNL------IYSSRNQGDLGA---GAQMHILSASSQN---------LPERPDQPDCR 158
AG + Y +QG A G+Q LS+S+ P RP QP+C+
Sbjct: 247 SAGGHQTVQAGPFYGLSHQGPSAAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQPECQ 306
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 218
YY+ TG+CK+G+ CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC
Sbjct: 307 YYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTC 366
Query: 219 RFDHPY-----------------AGYPINYGLS 234
+FDHP A YP+NY ++
Sbjct: 367 KFDHPMGTLSYSPSASSITDLPIAPYPLNYAVA 399
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG----LPSR 197
+ ++ LPERP + DC YY+ TG C YG +C+++HP++R A + + G P R
Sbjct: 42 AVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPER 101
Query: 198 PGQAICSNYSMYGICKFGPTCRFDHPYAG 226
PGQ +C Y G CKFG C++DHP G
Sbjct: 102 PGQPVCEYYMKNGTCKFGSNCKYDHPREG 130
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 204
S PERP QP C YYM GTCK+G++CK+ HP+E Q+ N G P R G+ C+
Sbjct: 95 SAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQAVMLNSS--GYPLRSGEKDCT 152
Query: 205 NYSMYGICKFGPTCRFDHPYAG 226
Y G CKFG TC+F HP G
Sbjct: 153 YYVKTGHCKFGSTCKFHHPEIG 174
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 67/177 (37%), Gaps = 55/177 (31%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E C YY+RTG+C +G C+++HP+ + L N + S+ P
Sbjct: 51 RPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVL----NGGGKTTHSAEYPE------ 100
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
P Q P YM N T GSN
Sbjct: 101 -----------------------------RPGQ-----PVCEYYMKNG-----TCKFGSN 121
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
Y +G + A + +S P R + DC YY+ TG CK+G+ CKFHHP+
Sbjct: 122 CKYDHPREGSVQA------VMLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPE 172
>gi|42573387|ref|NP_974790.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
gi|21536865|gb|AAM61197.1| zinc finger protein 3 [Arabidopsis thaliana]
gi|332004924|gb|AED92307.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
Length = 354
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 139/291 (47%), Gaps = 57/291 (19%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C Y++R G CKFG CKF+HPQ S N + GS V S LQ
Sbjct: 111 LRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQST--------NLMVSVRGSPVY--SALQS 160
Query: 61 AGSLPTWSLQRAPYLSS--RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
P++S R ++++ RLQ + S SQG + + G+++ GN PL ++
Sbjct: 161 LTGQPSYSWSRTSFVANPPRLQDPSGF----ASGSQGGLFSSGFHS--GNSVPLGFYALP 214
Query: 119 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
N+ PERP QP+C++YM TG CK+G CKFHHP+
Sbjct: 215 RENV-------------------------FPERPGQPECQFYMKTGDCKFGTVCKFHHPR 249
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPL 238
+R + +GLP RPG+ +C YS YGICKFGP+C+FDHP + N + P
Sbjct: 250 DRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSP 309
Query: 239 SILDSSLMNHQAIS-------ATHSIETSPDASSKIPNWVQNSDA-VSVQH 281
S SSL AI+ + S+E P + +P D V QH
Sbjct: 310 S---SSLHQETAITTELRNLLVSSSVEAKP---TSLPETTSAKDTIVDAQH 354
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PER QP+C +Y+ TGTCK+G CKFHHP+ + + ++ L P RP + CS +
Sbjct: 64 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLR 123
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F+HP
Sbjct: 124 IGQCKFGGTCKFNHP 138
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 129 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 188
Q +LG+ M + + PER +PDC YY+ TG C++G+ C+F+HP +R A +
Sbjct: 3 QMNLGSDDTMGV----DGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATAR 58
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
I P R GQ C Y G CKFG TC+F HP I+ +S+ LS
Sbjct: 59 IKG-EYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLS 108
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
RN+ + +++LS P RP++ DC Y++ G CK+G CKF+HP+
Sbjct: 93 RNKAGIDGSVSVNVLS-----YPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQ 139
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG C+F+HP L A
Sbjct: 21 RHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIA 55
>gi|224123154|ref|XP_002330352.1| predicted protein [Populus trichocarpa]
gi|222871556|gb|EEF08687.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 126/240 (52%), Gaps = 21/240 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E+ C YY++TG CKFG CKFHHPQP ++ G ++ PS
Sbjct: 138 LRPGERECTYYIKTGQCKFGATCKFHHPQPGNIQIPAQSLAPQIAPVPGPTLYPSVQSPS 197
Query: 61 AGSLPTWSLQ--RAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTS 116
S + + R P L S +QG Y P+++SPS +VP P WN Y + P+ SP +
Sbjct: 198 VPSSQQYGVMVARPPLLPGSYVQGP--YGPVLLSPS--VVPYPSWNPYPAPVSPVASPNT 253
Query: 117 --IAGSNLIYSSRN---QGDLGAGAQMHIL-----SASSQN---LPERPDQPDCRYYMNT 163
GS +Y GA I S+S+Q PERP QP+C+YY+ T
Sbjct: 254 QPAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPSSSTQKEHLFPERPGQPECQYYIKT 313
Query: 164 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G CK+ + C++HHP E + + + P+GLP RPG CS+Y+ G CKFGP C+FDHP
Sbjct: 314 GDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSHYTQRGQCKFGPACKFDHP 373
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%)
Query: 136 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 195
A + A PER QP C+YYM TGTCK+GA CK+HHPK+ ++ ++ G P
Sbjct: 78 AVLGAARAGGAEYPERAGQPLCQYYMRTGTCKFGASCKYHHPKQGGGSASPVSLNYYGYP 137
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
RPG+ C+ Y G CKFG TC+F HP G
Sbjct: 138 LRPGERECTYYIKTGQCKFGATCKFHHPQPG 168
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%)
Query: 132 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP 191
L G L + PER ++ DC YY+ TG C YGA C+++HP++R A A+ G
Sbjct: 28 LEEGVWQLGLGETESEYPERSNEQDCMYYLRTGFCGYGARCRYNHPRDRNAVLGAARAGG 87
Query: 192 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
P R GQ +C Y G CKFG +C++ HP G
Sbjct: 88 AEYPERAGQPLCQYYMRTGTCKFGASCKYHHPKQG 122
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 80/199 (40%), Gaps = 61/199 (30%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R +E+ C YY+RTG C +G C+++H P NA LG+ + G +Y
Sbjct: 47 RSNEQDCMYYLRTGFCGYGARCRYNH----------PRDRNAVLGAARAG-----GAEYP 91
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
++ PL YM + T G++
Sbjct: 92 --------------------ERAGQPLC-------------QYYM-----RTGTCKFGAS 113
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK--- 178
Y QG G +S + P RP + +C YY+ TG CK+GA CKFHHP+
Sbjct: 114 CKYHHPKQG----GGSASPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKFHHPQPGN 169
Query: 179 -ERIAQSAASNIGPLGLPS 196
+ AQS A I P+ P+
Sbjct: 170 IQIPAQSLAPQIAPVPGPT 188
>gi|297807877|ref|XP_002871822.1| hypothetical protein ARALYDRAFT_488738 [Arabidopsis lyrata subsp.
lyrata]
gi|297317659|gb|EFH48081.1| hypothetical protein ARALYDRAFT_488738 [Arabidopsis lyrata subsp.
lyrata]
Length = 474
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 127/232 (54%), Gaps = 16/232 (6%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C Y+MRTG CKFG C++HHP P + A + S G ++ PS Q
Sbjct: 145 LRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAA---SQQQQQLSAGPTMYPSLQSQS 201
Query: 61 AGSLPTWS--LQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPTS 116
S + L R L S +Q Y +++ P G+VP GWN Y ++ + SP +
Sbjct: 202 VPSSQQYGVVLARPQILPGSYVQSPYGYGQMVIPP--GMVPYSGWNPYQASVSAIPSPGT 259
Query: 117 --IAGSNLIYS----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 170
G++ +Y S + +G ++ Q P+RP+QP+C+Y+M TG CK+G+
Sbjct: 260 QPSIGTSSVYGITPLSPSAPAYQSGPSSTGVTNKEQTFPQRPEQPECQYFMRTGDCKFGS 319
Query: 171 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
C+FHHP E A AS + +GLP RPG C++++ +GICKFGP C+FDH
Sbjct: 320 SCRFHHPME-AASPEASTLSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDH 370
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
++ PERPD+PDC Y++ TG C YG+ C+F+HP+ R + P R GQ +C +
Sbjct: 46 ESFPERPDEPDCIYFLRTGVCGYGSRCRFNHPRNRAPVLGSLRTEAGEFPERMGQPVCQH 105
Query: 206 YSMYGICKFGPTCRFDHPYAG 226
+ G CKFG +C++ HP G
Sbjct: 106 FMRTGTCKFGASCKYHHPRQG 126
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 7/88 (7%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP-----LGLP 195
L + PER QP C+++M TGTCK+GA CK+HHP++ ++ P +G P
Sbjct: 87 LRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQ--GGGGGDSVTPVSLNYMGFP 144
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
RPG+ CS + G CKFG TCR+ HP
Sbjct: 145 LRPGEKECSYFMRTGQCKFGSTCRYHHP 172
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 67/176 (38%), Gaps = 54/176 (30%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R DE C Y++RTG C +G C+F+H P LGS+ + A
Sbjct: 51 RPDEPDCIYFLRTGVCGYGSRCRFNH----------PRNRAPVLGSLRTE---------A 91
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
G P Q Q +M + T G++
Sbjct: 92 GEFPERMGQPV---------CQHFM-------------------------RTGTCKFGAS 117
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
Y QG G G + +S + P RP + +C Y+M TG CK+G+ C++HHP
Sbjct: 118 CKYHHPRQGG-GGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHP 172
>gi|297833390|ref|XP_002884577.1| hypothetical protein ARALYDRAFT_477944 [Arabidopsis lyrata subsp.
lyrata]
gi|297330417|gb|EFH60836.1| hypothetical protein ARALYDRAFT_477944 [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 124/236 (52%), Gaps = 23/236 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS----- 55
+R EK C YY+RTG CKFG+ C+F+HP P L P ++ P+
Sbjct: 142 LRPGEKECSYYLRTGQCKFGLTCRFNHPVP--LAVQGPPQHQQQQQPQLQTIYPTLQSQS 199
Query: 56 --SGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL- 112
S QY L SL YL S Y P +V P G+VP GWN Y ++ +
Sbjct: 200 VPSSQQYGLVLTRPSLLPGSYLPS------PYGPPMVLPP-GMVPYSGWNPYQASLSAMP 252
Query: 113 SPTS--IAGSNLIYS----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTC 166
SP + GS+ +Y S + Q S +S+ P+RPDQP+C+Y+M TG C
Sbjct: 253 SPGTQPSIGSSSVYGITPLSPSVTAYTGAYQSGPSSNTSKEFPQRPDQPECQYFMRTGDC 312
Query: 167 KYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
K+G+ C++HHP + + + +GLP RPG A C+++S +GICKFGP CRFDH
Sbjct: 313 KFGSSCRYHHPVDAVPPKTGLVLSSIGLPLRPGVAQCTHFSQHGICKFGPACRFDH 368
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PERPD+PDC YY+ TG C YG+ C+F+HP++R A LP R G +C ++
Sbjct: 47 PERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMR 106
Query: 209 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
G CKFG +C++ HP G G S+ P+S+
Sbjct: 107 TGTCKFGASCKYHHPRQG---GGGGSVAPVSL 135
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
T G++ Y QG G G + +S S P RP + +C YY+ TG CK+G C+F
Sbjct: 109 TCKFGASCKYHHPRQG--GGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRF 166
Query: 175 HHP 177
+HP
Sbjct: 167 NHP 169
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R C ++MRTG+CKFG +CK+HHP+
Sbjct: 95 RMGHPVCQHFMRTGTCKFGASCKYHHPR 122
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG C +G C+F+HP+
Sbjct: 49 RPDEPDCIYYLRTGVCGYGSRCRFNHPR 76
>gi|413947010|gb|AFW79659.1| hypothetical protein ZEAMMB73_788382 [Zea mays]
Length = 374
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 139/291 (47%), Gaps = 50/291 (17%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYM+TG CKFG CKFHHP+ LG G M V PS +
Sbjct: 57 LRLGEKECSYYMKTGHCKFGGTCKFHHPE---LGFLTETPG------MYPPVQPSP-ISS 106
Query: 61 AGSLP---TWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 116
P W + R + S L G Y P+++ P+ ++P GWN Y + P++ T+
Sbjct: 107 PHPYPHHSNWQMGRPAVVPGSFLPG--PYPPMMLPPT--VMPMQGWNPY---VSPMNQTT 159
Query: 117 IAG-------------------SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDC 157
AG S + Y S + L + + + PERP QP+C
Sbjct: 160 PAGGQQAVPAGPSYGLSHQEPTSAVTYGS-HYAQLYSSSGTSSSNIQEYVFPERPGQPEC 218
Query: 158 RYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
+YM TGTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPT
Sbjct: 219 EHYMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQRCAYYAHHGFCKFGPT 278
Query: 218 CRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIP 268
C+FDHP G P NY L P SL + H+ +P A +P
Sbjct: 279 CKFDHP-MGTP-NYSLPAP-------SLTDVPVAPYPHTFSVTPIAPYLLP 320
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 158 RYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
+YY GTCK+G++CKF HP+E A N G P R G+ CS Y G CKFG T
Sbjct: 21 QYYAKNGTCKFGSNCKFDHPRESGFVPVALNNS--GFPLRLGEKECSYYMKTGHCKFGGT 78
Query: 218 CRFDHPYAGY 227
C+F HP G+
Sbjct: 79 CKFHHPELGF 88
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
++ ++ P R + +C YYM TG CK+G CKFHHP+
Sbjct: 48 VALNNSGFPLRLGEKECSYYMKTGHCKFGGTCKFHHPE 85
>gi|413947007|gb|AFW79656.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
Length = 448
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/291 (35%), Positives = 139/291 (47%), Gaps = 50/291 (17%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYM+TG CKFG CKFHHP+ LG G M V PS +
Sbjct: 131 LRLGEKECSYYMKTGHCKFGGTCKFHHPE---LGFLTETPG------MYPPVQPSP-ISS 180
Query: 61 AGSLP---TWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 116
P W + R + S L G Y P+++ P+ ++P GWN Y + P++ T+
Sbjct: 181 PHPYPHHSNWQMGRPAVVPGSFLPG--PYPPMMLPPT--VMPMQGWNPY---VSPMNQTT 233
Query: 117 IAG-------------------SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDC 157
AG S + Y S + L + + + PERP QP+C
Sbjct: 234 PAGGQQAVPAGPSYGLSHQEPTSAVTYGS-HYAQLYSSSGTSSSNIQEYVFPERPGQPEC 292
Query: 158 RYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
+YM TGTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPT
Sbjct: 293 EHYMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQRCAYYAHHGFCKFGPT 352
Query: 218 CRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIP 268
C+FDHP G P NY L P SL + H+ +P A +P
Sbjct: 353 CKFDHP-MGTP-NYSLPAP-------SLTDVPVAPYPHTFSVTPIAPYLLP 394
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
S AG+ L S R G LG + A + LPERP + DC YY+ TG C YG C+++
Sbjct: 12 SDAGTGLEESMRKLG-LGEDDE-----AGEEKLPERPGEADCTYYLRTGACGYGERCRYN 65
Query: 176 HPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
HP++R A + + P RPGQ +C Y+ G CKFG C+FDHP
Sbjct: 66 HPRDRPAPVNGVGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHP 114
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 140 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 199
+ + PERP QP C YY GTCK+G++CKF HP+E A N G P R G
Sbjct: 77 VGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRESGFVPVALNNS--GFPLRLG 134
Query: 200 QAICSNYSMYGICKFGPTCRFDHPYAGY 227
+ CS Y G CKFG TC+F HP G+
Sbjct: 135 EKECSYYMKTGHCKFGGTCKFHHPELGF 162
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E C YY+RTG+C +G C+++HP+
Sbjct: 41 RPGEADCTYYLRTGACGYGERCRYNHPR 68
>gi|224133812|ref|XP_002321667.1| predicted protein [Populus trichocarpa]
gi|222868663|gb|EEF05794.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 121/227 (53%), Gaps = 24/227 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C +YMR GSCK+G CK++HP P ++G + LT ++ + G++ LP+
Sbjct: 91 IRPGEKQCEFYMRNGSCKYGATCKYNHPDPMAVGGS-DLT--SAFVNGGTTSLPAPSPSS 147
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS-----PT 115
GS S RA L ++P + SP++ + WN Y G + P P
Sbjct: 148 VGSW---SSPRA------LNDPTPFVPYVFSPTRLPSQSSEWNGYQGTLYPPERSLHPPP 198
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
S A SN S ++ A Q + PERP Q C Y+M G CK+ ++CK+H
Sbjct: 199 SYAMSNPATES----NVYAPQQQQTVV---DEFPERPGQQLCSYFMKFGDCKFKSNCKYH 251
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
HPK RI +S + + GLP RP Q ICS YS YGICKFGP C+FDH
Sbjct: 252 HPKNRIPKSPSLTLSDKGLPLRPDQIICSYYSRYGICKFGPACKFDH 298
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS--------AASNIGPLGLPSRPGQA 201
E+P Q +C+YY+ TG CKYG C+F+H +E+ + + LGLP RPG+
Sbjct: 37 EKPGQTECKYYLRTGGCKYGKACRFNHTREKTFSVPPLKTPMPSILELNFLGLPIRPGEK 96
Query: 202 ICSNYSMYGICKFGPTCRFDHP 223
C Y G CK+G TC+++HP
Sbjct: 97 QCEFYMRNGSCKYGATCKYNHP 118
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 161 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS-RPGQAICSNYSMYGICKFGPTCR 219
M TGTCK+G +CKF+HP R Q+ N+ + +PGQ C Y G CK+G CR
Sbjct: 1 MKTGTCKFGVNCKFNHPVRRKNQAVKENVKEREEATEKPGQTECKYYLRTGGCKYGKACR 60
Query: 220 FDHPYAGYPINYGLSLPPL-----SILDSSLM 246
F+H S+PPL SIL+ + +
Sbjct: 61 FNHTREK-----TFSVPPLKTPMPSILELNFL 87
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 140 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
IL + LP RP + C +YM G+CKYGA CK++HP
Sbjct: 81 ILELNFLGLPIRPGEKQCEFYMRNGSCKYGATCKYNHP 118
>gi|6437560|gb|AAF08587.1|AC011623_20 hypothetical protein [Arabidopsis thaliana]
Length = 437
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 125/234 (53%), Gaps = 14/234 (5%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGS--SVLPSSGL 58
+R EK C YY+RTG CKFG+ C+F+HP P ++ ++ P+
Sbjct: 122 LRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQS 181
Query: 59 QYAGSLPTWSL--QRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPT 115
Q S + L R +L+ + P+++ P G+VP GWN Y ++ + SP
Sbjct: 182 QSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPP--GMVPYSGWNPYQASLSAMPSPG 239
Query: 116 S--IAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 168
+ GS+ IY S G + +++S+ P+RPDQP+C+Y+M TG CK+
Sbjct: 240 TQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKF 299
Query: 169 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G+ C++HHP + + + +GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 300 GSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 353
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
++ PERPD+PDC YY+ TG C YG+ C+F+HP++R A LP R G +C +
Sbjct: 24 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQH 83
Query: 206 YSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
+ G CKFG +C++ HP G G S+ P+S+
Sbjct: 84 FMRTGTCKFGASCKYHHPRQG---GGGGSVAPVSL 115
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
T G++ Y QG G G + +S S P RP + +C YY+ TG CK+G C+F
Sbjct: 89 TCKFGASCKYHHPRQG--GGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRF 146
Query: 175 HHP 177
+HP
Sbjct: 147 NHP 149
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R C ++MRTG+CKFG +CK+HHP+
Sbjct: 75 RMGHPVCQHFMRTGTCKFGASCKYHHPR 102
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG C +G C+F+HP+
Sbjct: 29 RPDEPDCIYYLRTGVCGYGSRCRFNHPR 56
>gi|79395677|ref|NP_187292.2| zinc finger CCCH domain-containing protein 34 [Arabidopsis
thaliana]
gi|150387824|sp|Q9SQU4.2|C3H34_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 34;
Short=AtC3H34; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 2
gi|110741372|dbj|BAF02236.1| hypothetical protein [Arabidopsis thaliana]
gi|332640868|gb|AEE74389.1| zinc finger CCCH domain-containing protein 34 [Arabidopsis
thaliana]
Length = 462
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 125/234 (53%), Gaps = 14/234 (5%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGS--SVLPSSGL 58
+R EK C YY+RTG CKFG+ C+F+HP P ++ ++ P+
Sbjct: 147 LRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQS 206
Query: 59 QYAGSLPTWSL--QRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPT 115
Q S + L R +L+ + P+++ P G+VP GWN Y ++ + SP
Sbjct: 207 QSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPP--GMVPYSGWNPYQASLSAMPSPG 264
Query: 116 S--IAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 168
+ GS+ IY S G + +++S+ P+RPDQP+C+Y+M TG CK+
Sbjct: 265 TQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKF 324
Query: 169 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G+ C++HHP + + + +GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 325 GSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
++ PERPD+PDC YY+ TG C YG+ C+F+HP++R A LP R G +C +
Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQH 108
Query: 206 YSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
+ G CKFG +C++ HP G G S+ P+S+
Sbjct: 109 FMRTGTCKFGASCKYHHPRQG---GGGGSVAPVSL 140
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
T G++ Y QG G G + +S S P RP + +C YY+ TG CK+G C+F
Sbjct: 114 TCKFGASCKYHHPRQG--GGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRF 171
Query: 175 HHP 177
+HP
Sbjct: 172 NHP 174
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R C ++MRTG+CKFG +CK+HHP+
Sbjct: 100 RMGHPVCQHFMRTGTCKFGASCKYHHPR 127
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG C +G C+F+HP+
Sbjct: 54 RPDEPDCIYYLRTGVCGYGSRCRFNHPR 81
>gi|125569790|gb|EAZ11305.1| hypothetical protein OsJ_01167 [Oryza sativa Japonica Group]
Length = 376
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 128/240 (53%), Gaps = 29/240 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYM+TG CKFG CKFHHP+ G +P+T S+ +S Y
Sbjct: 68 IRLGEKECSYYMKTGQCKFGTTCKFHHPE---FG-GVPMTPGIYPPLQSPSI--ASPHPY 121
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
A SL W + R P + S + G SY P+++S G++P GW+ Y ++ P+ + A
Sbjct: 122 A-SLANWQMGRPPVVPGSYIPG--SYTPMMLS--SGMIPLQGWSPYPASVNPVV-SGGAQ 175
Query: 120 SNL----IYSSRNQGDLG----AGAQMHILSASSQN--------LPERPDQPDCRYYMNT 163
N+ +Y + G G + S++ Q+ PERP QPDC+YYM T
Sbjct: 176 QNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRT 235
Query: 164 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G CK+GA CK+HHP+E A + + L LP RPG C+ Y+ G C++G C++DHP
Sbjct: 236 GDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 295
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 128 NQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS 187
+ + G GA+ +A++ + PER QP C YYM TGTCK+G +CK+HHPK+ A
Sbjct: 5 DSANFGGGAR----NAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPVM 60
Query: 188 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPL 238
+ G P R G+ CS Y G CKFG TC+F HP + G P+ G+ PPL
Sbjct: 61 -LNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGI-YPPL 110
>gi|110740437|dbj|BAF02113.1| hypothetical protein [Arabidopsis thaliana]
Length = 462
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 125/234 (53%), Gaps = 14/234 (5%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGS--SVLPSSGL 58
+R EK C YY+RTG CKFG+ C+F+HP P ++ ++ P+
Sbjct: 147 LRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQS 206
Query: 59 QYAGSLPTWSL--QRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL-SPT 115
Q S + L R +L+ + P+++ P G+VP GWN Y ++ + SP
Sbjct: 207 QSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPP--GMVPYSGWNPYQASLSAMPSPG 264
Query: 116 S--IAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 168
+ GS+ IY S G + +++S+ P+RPDQP+C+Y+M TG CK+
Sbjct: 265 TQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKF 324
Query: 169 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G+ C++HHP + + + +GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 325 GSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
++ PERPD+PDC YY+ TG C YG+ C+F+HP++R A LP R G +C +
Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQH 108
Query: 206 YSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
+ G CKFG +C++ HP G G S+ P+S+
Sbjct: 109 FMRTGTCKFGASCKYHHPRQG---GGGGSVAPVSL 140
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
T G++ Y QG G G + +S S P RP + +C YY+ TG CK+G C+F
Sbjct: 114 TCKFGASCKYHHPRQG--GGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRF 171
Query: 175 HHP 177
+HP
Sbjct: 172 NHP 174
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R C ++MRTG+CKFG +CK+HHP+
Sbjct: 100 RMGHPVCQHFMRTGTCKFGASCKYHHPR 127
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG C +G C+F+HP+
Sbjct: 54 RPDEPDCIYYLRTGVCGYGSRCRFNHPR 81
>gi|125525255|gb|EAY73369.1| hypothetical protein OsI_01247 [Oryza sativa Indica Group]
Length = 324
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 126/242 (52%), Gaps = 37/242 (15%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQ----PSSLGTALPLTGNASLGSMGSSVLPSSGL 58
Q EK C YYM+TG CKFG CKFHHP+ P + G PL + +S
Sbjct: 2 QGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMNPGIYPPLQSPSI----------ASPH 51
Query: 59 QYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 117
YA SL W + R P + S + G SY P+++S G++P GW+ Y ++ P+ +
Sbjct: 52 PYA-SLANWQMGRPPVVPGSYIPG--SYTPMMLS--SGMIPLQGWSPYPASVNPVV-SGG 105
Query: 118 AGSNL----IYSSRNQGDLG----AGAQMHILSASSQN--------LPERPDQPDCRYYM 161
A N+ +Y + G G + S++ Q+ PERP QPDC+YYM
Sbjct: 106 AQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYM 165
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CK+GA CK+HHP+E A + + L LP RPG C+ Y+ G C++G C++D
Sbjct: 166 RTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYD 225
Query: 222 HP 223
HP
Sbjct: 226 HP 227
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R + C YYMRTG CKFG CK+HHP+
Sbjct: 155 RPGQPDCQYYMRTGDCKFGATCKYHHPR 182
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG---TALPLT 40
+R + C YY + G C++GVACK+ HP +LG +ALPL+
Sbjct: 200 LRPGAQPCAYYAQNGYCRYGVACKYDHPM-GTLGYSPSALPLS 241
>gi|56783965|dbj|BAD81402.1| putative floral homeotic protein HUA1 [Oryza sativa Japonica Group]
Length = 447
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 135/258 (52%), Gaps = 31/258 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYM+TG CKFG CKFHHP+ G +P+T S+ +S Y
Sbjct: 123 IRLGEKECSYYMKTGQCKFGTTCKFHHPE---FG-GVPMTPGIYPPLQSPSI--ASPHPY 176
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
A SL W + R P + S + G SY P+++S G++P GW+ Y ++ P+ + A
Sbjct: 177 A-SLANWQMGRPPVVPGSYIPG--SYTPMMLS--SGMIPLQGWSPYPASVNPVV-SGGAQ 230
Query: 120 SNL----IYSSRNQGDLG----AGAQMHILSASSQN--------LPERPDQPDCRYYMNT 163
N+ +Y + G G + S++ Q+ PERP QPDC+YYM T
Sbjct: 231 QNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRT 290
Query: 164 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G CK+GA CK+HHP+E A + + L LP RPG C+ Y+ G C++G C++DHP
Sbjct: 291 GDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 350
Query: 224 YAGYPINYGLSLPPLSIL 241
+ Y S PLS +
Sbjct: 351 MGT--LGYSPSALPLSDM 366
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + G GA+ +A++ + PER QP C YYM TGTCK+G +CK+HHPK+ A
Sbjct: 59 RGGTEFGGGAR----NAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPV 114
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPL 238
+ G P R G+ CS Y G CKFG TC+F HP + G P+ G+ PPL
Sbjct: 115 M-LNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGI-YPPL 165
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAIC 203
LPERP + DC YY+ TG C +G C+++HP++R A N L P R GQ IC
Sbjct: 26 RLPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPIC 85
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y G CKFG C++ HP
Sbjct: 86 EYYMKTGTCKFGTNCKYHHP 105
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E+ C YY+RTG+C FG C+++HP+
Sbjct: 30 RPGEEDCVYYLRTGACGFGDRCRYNHPR 57
>gi|115435758|ref|NP_001042637.1| Os01g0258700 [Oryza sativa Japonica Group]
gi|62901411|sp|Q5NAW2.2|C3H6_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 6;
Short=OsC3H6; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 1
gi|56783964|dbj|BAD81401.1| putative floral homeotic protein HUA1 [Oryza sativa Japonica Group]
gi|113532168|dbj|BAF04551.1| Os01g0258700 [Oryza sativa Japonica Group]
Length = 476
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 135/258 (52%), Gaps = 31/258 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYM+TG CKFG CKFHHP+ G +P+T S+ +S Y
Sbjct: 152 IRLGEKECSYYMKTGQCKFGTTCKFHHPE---FG-GVPMTPGIYPPLQSPSI--ASPHPY 205
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
A SL W + R P + S + G SY P+++S G++P GW+ Y ++ P+ + A
Sbjct: 206 A-SLANWQMGRPPVVPGSYIPG--SYTPMMLS--SGMIPLQGWSPYPASVNPVV-SGGAQ 259
Query: 120 SNL----IYSSRNQGDLG----AGAQMHILSASSQN--------LPERPDQPDCRYYMNT 163
N+ +Y + G G + S++ Q+ PERP QPDC+YYM T
Sbjct: 260 QNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRT 319
Query: 164 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G CK+GA CK+HHP+E A + + L LP RPG C+ Y+ G C++G C++DHP
Sbjct: 320 GDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 379
Query: 224 YAGYPINYGLSLPPLSIL 241
+ Y S PLS +
Sbjct: 380 MGT--LGYSPSALPLSDM 395
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + G GA+ +A++ + PER QP C YYM TGTCK+G +CK+HHPK+ A
Sbjct: 88 RGGTEFGGGAR----NAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPV 143
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPL 238
+ G P R G+ CS Y G CKFG TC+F HP + G P+ G+ PPL
Sbjct: 144 M-LNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGI-YPPL 194
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAIC 203
LPERP + DC YY+ TG C +G C+++HP++R A N L P R GQ IC
Sbjct: 55 RLPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPIC 114
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y G CKFG C++ HP
Sbjct: 115 EYYMKTGTCKFGTNCKYHHP 134
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E+ C YY+RTG+C FG C+++HP+
Sbjct: 59 RPGEEDCVYYLRTGACGFGDRCRYNHPR 86
>gi|326507710|dbj|BAJ86598.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518680|dbj|BAJ92501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 149/318 (46%), Gaps = 30/318 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YY++TG CKFG CKFHHP+ LG ++ ++ + SS L Y
Sbjct: 143 LRLGEKECSYYIKTGHCKFGSTCKFHHPEGPELGV---VSEPPNMYPPVQQLPVSSPLPY 199
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS--- 116
L +W L R L S G+ P ++ PS ++P GWN YM + ++P
Sbjct: 200 P-PLASWQLGRPSVLPGSFFPGS---YPPMMHPS-AVMPMQGWNPYMSPMNQVAPAGGQQ 254
Query: 117 IAGSNLIYSSRNQGDLGAGA-----------QMHILSASSQNLPERPDQPDCRYYMNTGT 165
+ +Y +QG A A PERP QP+C +YM TGT
Sbjct: 255 TVQAGPLYGLSHQGPPSAVAYGSNYASLSSSTWPSSDKQEVVFPERPGQPECHHYMKTGT 314
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
CK+G+ CK++HP+ + + PLGLP RPG C YS +G CKFGP C+FDHP
Sbjct: 315 CKFGSTCKYNHPQYLSTPRSNYMLSPLGLPIRPGAQPCLYYSQHGFCKFGPGCKFDHPLG 374
Query: 226 GYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPD 285
++Y S S+ D + + + SP +S P ++ D+ + Q +P
Sbjct: 375 A--LSYSPSA--SSLGDMPIAPYPLSLPVAPMAPSPSSSGLRPEYILAKDSSANQPASP- 429
Query: 286 MKNSTTKNSDDSSKVDHP 303
+T + SK+ P
Sbjct: 430 --GTTFGPAGQMSKIYAP 445
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 131 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 190
D A I + + PERP QP C YYM GTCK+G++CK++HP+E ++
Sbjct: 79 DRAAAFDGGIRTTRTVEYPERPGQPPCEYYMKNGTCKFGSNCKYNHPRE------GGSVQ 132
Query: 191 PL-----GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P+ G P R G+ CS Y G CKFG TC+F HP
Sbjct: 133 PVVLNSSGYPLRLGEKECSYYIKTGHCKFGSTCKFHHP 170
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA--QSAASNIGPLGLPSRPGQAICSNY 206
PERP + +C YY+ TG C YG C+++HP++R A + P RPGQ C Y
Sbjct: 49 PERPGEANCVYYLRTGACGYGETCRYNHPRDRAAAFDGGIRTTRTVEYPERPGQPPCEYY 108
Query: 207 SMYGICKFGPTCRFDHPYAG 226
G CKFG C+++HP G
Sbjct: 109 MKNGTCKFGSNCKYNHPREG 128
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
T GSN Y N G Q +L++S P R + +C YY+ TG CK+G+ CKF
Sbjct: 113 TCKFGSNCKY---NHPREGGSVQPVVLNSS--GYPLRLGEKECSYYIKTGHCKFGSTCKF 167
Query: 175 HHPK 178
HHP+
Sbjct: 168 HHPE 171
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E +C YY+RTG+C +G C+++HP+
Sbjct: 51 RPGEANCVYYLRTGACGYGETCRYNHPR 78
>gi|215767117|dbj|BAG99345.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 464
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/258 (36%), Positives = 135/258 (52%), Gaps = 31/258 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYM+TG CKFG CKFHHP+ G +P+T S+ +S Y
Sbjct: 140 IRLGEKECSYYMKTGQCKFGTTCKFHHPE---FG-GVPMTPGIYPPLQSPSI--ASPHPY 193
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
A SL W + R P + S + G SY P+++S G++P GW+ Y ++ P+ + A
Sbjct: 194 A-SLANWQMGRPPVVPGSYIPG--SYTPMMLS--SGMIPLQGWSPYPASVNPVV-SGGAQ 247
Query: 120 SNL----IYSSRNQGDLG----AGAQMHILSASSQN--------LPERPDQPDCRYYMNT 163
N+ +Y + G G + S++ Q+ PERP QPDC+YYM T
Sbjct: 248 QNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRT 307
Query: 164 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G CK+GA CK+HHP+E A + + L LP RPG C+ Y+ G C++G C++DHP
Sbjct: 308 GDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 367
Query: 224 YAGYPINYGLSLPPLSIL 241
+ Y S PLS +
Sbjct: 368 MGT--LGYSPSALPLSDM 383
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + G GA+ +A++ + PER QP C YYM TGTCK+G +CK+HHPK+ A
Sbjct: 76 RGGTEFGGGAR----NAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPV 131
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPL 238
+ G P R G+ CS Y G CKFG TC+F HP + G P+ G+ PPL
Sbjct: 132 M-LNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGI-YPPL 182
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAIC 203
LPERP + DC YY+ TG C +G C+++HP++R A N L P R GQ IC
Sbjct: 43 RLPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPIC 102
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y G CKFG C++ HP
Sbjct: 103 EYYMKTGTCKFGTNCKYHHP 122
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E+ C YY+RTG+C FG C+++HP+
Sbjct: 47 RPGEEDCVYYLRTGACGFGDRCRYNHPR 74
>gi|301133584|gb|ADK63414.1| CCCH type zinc finger protein [Brassica rapa]
Length = 455
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 126/236 (53%), Gaps = 26/236 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYMRTG CKFG+ C+F+HP P ++ S +PS+ QY
Sbjct: 146 LRSGEKECSYYMRTGQCKFGLTCRFNHPVPQPQQQQPQTQNIYP--TLQSQPMPSA-QQY 202
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTY------MGNIGPLSP 114
L SL YL S Y P +V P G+V P WN Y M + G +
Sbjct: 203 GLVLTRPSLLPGSYLPS------PYGPPMVLPP-GMVTYPNWNPYPASLTAMPSPGTGTQ 255
Query: 115 TSIAGSNLIYS--------SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTC 166
SI G++ +Y + G +G + ++ + P+RPDQP+C+Y+M TG C
Sbjct: 256 QSI-GTSSVYGMAPLSPSGTAYTGTYQSGGP-SLTTSKEEPFPQRPDQPECQYFMRTGDC 313
Query: 167 KYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
K+GA C++HHP + + + + P+GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 314 KFGASCRYHHPLDAVQTNTGVLLSPIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 369
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 49/75 (65%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 207
LPER QP C+++M TGTCKYG CK+HHP++ A ++ LG P R G+ CS Y
Sbjct: 98 LPERMGQPVCQHFMRTGTCKYGGSCKYHHPRQGGGSVAPVSLSYLGYPLRSGEKECSYYM 157
Query: 208 MYGICKFGPTCRFDH 222
G CKFG TCRF+H
Sbjct: 158 RTGQCKFGLTCRFNH 172
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 12/107 (11%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE-------RIAQSAASNIGPLG 193
L+ + PER ++PDC YY+ TG C YG+ C+F+HP++ G
Sbjct: 38 LTGGGEAYPERSNEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVVGGVRGGGGGGGGGDGA 97
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
LP R GQ +C ++ G CK+G +C++ HP G G S+ P+S+
Sbjct: 98 LPERMGQPVCQHFMRTGTCKYGGSCKYHHPRQG-----GGSVAPVSL 139
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 134 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
G + +S S P R + +C YYM TG CK+G C+F+H
Sbjct: 130 GGGSVAPVSLSYLGYPLRSGEKECSYYMRTGQCKFGLTCRFNH 172
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R +E C YY+RTG C +G C+F+HP+
Sbjct: 48 RSNEPDCIYYLRTGVCGYGSRCRFNHPR 75
>gi|357154781|ref|XP_003576899.1| PREDICTED: zinc finger CCCH domain-containing protein 65-like
[Brachypodium distachyon]
Length = 524
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 32/255 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ- 59
+R K C YYMRTGSC++ C+FHHP P+++ + P+ + + G +P +Q
Sbjct: 265 IRPGGKECQYYMRTGSCRYATNCRFHHPDPTNVASREPVLEHENGGD-----IPQQNVQG 319
Query: 60 --------YAGSLPTWSLQRAPYLSSRLQGTQSYMP-LIVSPSQGIVPAPGWNTYMGNIG 110
+ T + AP+L+ + +P + P QG+ P P W+ Y +
Sbjct: 320 PSQPNVSIWPADQRTLNEHHAPFLAPAPSYSAGMIPPQGMIPPQGMYPTPEWSGY--HQV 377
Query: 111 PLSPTSIAGSNLIY----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTC 166
PLSP G+ + +Q GA H S PERP QP+C++++ +G C
Sbjct: 378 PLSPYYPPGTPFHHFPGPPVNHQIYRGADVPGH-QQLPSDEYPERPGQPECQHFVKSGYC 436
Query: 167 KYGADCKFHHPKERIAQSA-----ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
K+G CK+HHP+ + + A + PLGLP +P Q +C+ Y YG+CK+GP C ++
Sbjct: 437 KFGVKCKYHHPRSLMPRPPPPPPQAGTLSPLGLPLKPDQPVCTYYGRYGVCKYGPACLYN 496
Query: 222 HPYAGYPINYGLSLP 236
HP+ N+G +P
Sbjct: 497 HPF-----NFGHPVP 506
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
Q +C+YY G CK+G CK+ HP KER A+ + LGLP RPG C Y G
Sbjct: 221 QEECKYYKTFGGCKFGKSCKYLHPGGKERKAEVEEVELNFLGLPIRPGGKECQYYMRTGS 280
Query: 212 CKFGPTCRFDHP 223
C++ CRF HP
Sbjct: 281 CRYATNCRFHHP 292
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
+S S P RP +PDC YY+ GTC++G CKF+HP R
Sbjct: 84 VSDSGPRFPRRPAEPDCTYYIRFGTCRFGMKCKFNHPARR 123
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 136 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
A++ + + LP RP +C+YYM TG+C+Y +C+FHHP
Sbjct: 251 AEVEEVELNFLGLPIRPGGKECQYYMRTGSCRYATNCRFHHP 292
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 183 QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
++A S+ GP P RP + C+ Y +G C+FG C+F+HP
Sbjct: 81 KAAVSDSGPR-FPRRPAEPDCTYYIRFGTCRFGMKCKFNHP 120
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY+R G+C+FG+ CKF+HP
Sbjct: 94 RPAEPDCTYYIRFGTCRFGMKCKFNHP 120
>gi|326504076|dbj|BAK02824.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 140/291 (48%), Gaps = 31/291 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYM+TG CKFG CKFHHP+ G +P+T S+V SS Y
Sbjct: 146 LRPGEKECSYYMKTGQCKFGSTCKFHHPE---FG-GVPVTPGIYPPLQSSTV--SSPHPY 199
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS---PTS 116
A L W + R P + S + G SY P+++S G++P GW+ Y ++ P++
Sbjct: 200 A-PLTNWQMGRPPVVPGSYMPG--SYTPMMLS--SGMIPLQGWSPYPASVNPVASGGAQQ 254
Query: 117 IAGSNLIYSSRNQGD---LGAGAQMHILSASS---------QNLPERPDQPDCRYYMNTG 164
+ +Y + G + G S+S+ PERP QP+C+YYM TG
Sbjct: 255 TVQAGHMYGIGHHGSSSTIAYGGPYMPYSSSTIQSSNNQQEHGFPERPGQPECQYYMRTG 314
Query: 165 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
CK+GA CK+HHP++ + + P LP RPG CS Y+ G C++G C++DHP
Sbjct: 315 DCKFGATCKYHHPRDWSSPKSNYMFSPFCLPLRPGAQPCSYYAQNGYCRYGVACKYDHPM 374
Query: 225 AGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSD 275
G S P + D + + + ++ S + P ++ D
Sbjct: 375 G----TLGYSSSPFPLSDVPIAPYPLGFSIATLAPSSSSPDLRPEYISAKD 421
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + G GA+ +A + + PER QP C YYM TGTCK+G++CK+HHPK+ +
Sbjct: 82 RGGTEFGGGAK----NAVALDYPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPV 137
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPL 238
+ G P RPG+ CS Y G CKFG TC+F HP + G P+ G+ PPL
Sbjct: 138 M-LNSNGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGVPVTPGI-YPPL 188
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAIC 203
LPERPDQ DC YY+ TG C +G C+++HP++R A N L P R GQ +C
Sbjct: 49 RLPERPDQADCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVALDYPERLGQPVC 108
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y G CKFG C++ HP
Sbjct: 109 EYYMKTGTCKFGSNCKYHHP 128
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R D+ C YY+RTG+C FG C+++HP+
Sbjct: 53 RPDQADCIYYLRTGACGFGDRCRYNHPR 80
>gi|295913574|gb|ADG58033.1| transcription factor [Lycoris longituba]
Length = 146
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 99/152 (65%), Gaps = 13/152 (8%)
Query: 62 GSLPTWSLQRAPYLSS-RLQGTQSYMPLIV-SPSQGIVPAP-GWNTYMGNIGPLSPTSIA 118
G L W L R PYL + R+QG +Y+P+I+ PSQG +P W+TY G++ L T +
Sbjct: 5 GGLSAWPLAR-PYLPNPRMQGLSAYVPVILPQPSQGAMPMQQSWSTYTGSVSQLPSTDVR 63
Query: 119 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
G I + + G G S+++ NLPERPDQP+C+YYM TG+CKYG +CK+HHPK
Sbjct: 64 GHAQIPNMKLHGHSG--------SSTTMNLPERPDQPECQYYMKTGSCKYGTNCKYHHPK 115
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 210
E +S + +GPLGLP RPG AIC+ Y+MYG
Sbjct: 116 ESYTESPFT-LGPLGLPLRPGHAICTFYTMYG 146
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGL 58
R D+ C YYM+TGSCK+G CK+HHP+ S T P T LG +G + P +
Sbjct: 88 RPDQPECQYYMKTGSCKYGTNCKYHHPKESY--TESPFT----LGPLGLPLRPGHAI 138
>gi|357129792|ref|XP_003566545.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Brachypodium distachyon]
Length = 478
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 41/262 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSSLGTALPLTGNASLGSMGSSVLPSS 56
+R EK C YYM+TG CKFG CKFHHP+ P + G PL S +PS
Sbjct: 156 LRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGFPVTPGIYPPL----------QSSVPSP 205
Query: 57 GLQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS-- 113
YA SL W + R P + S + G SY P+++S G++P GW ++ + P++
Sbjct: 206 -HPYA-SLANWQMGRPPVVPGSYMPG--SYAPMMLS--SGMIPLQGW-SFRAAVNPVASG 258
Query: 114 -PTSIAGSNLIYSSRNQGDLGAGA------------QMHILSASSQNLPERPDQPDCRYY 160
P + +Y + G A S PERP QP+C+YY
Sbjct: 259 GPQQTVQAGPVYGIGHHGSSSTIAYGGPYMPYSSSTIQSSHSQQEHGFPERPGQPECQYY 318
Query: 161 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRF 220
M TG CK+GA CK+HHP++ + + P LP RPG CS Y+ G C++G C++
Sbjct: 319 MRTGDCKFGATCKYHHPRDWSSPKSNYVFSPFCLPLRPGAQPCSYYAQNGYCRYGVACKY 378
Query: 221 DHPYAGYPINYGLSLPPLSILD 242
DHP G S PL + D
Sbjct: 379 DHPMG----TLGYSSSPLPLSD 396
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 7/113 (6%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R + G GA+ ++ + PER QP C YYM TGTCK+G++CK+HHPK+
Sbjct: 92 RGGTEFGGGAKNAVV----LDYPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQD-GSVLP 146
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPL 238
+ G P RPG+ CS Y G CKFG TC+F HP + G+P+ G+ PPL
Sbjct: 147 VMLNNSGFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGFPVTPGI-YPPL 198
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQA 201
+ LPERPD+ DC YY+ TG C +G C+++HP++R A N L P R GQ
Sbjct: 57 AARLPERPDEADCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVVLDYPERLGQP 116
Query: 202 ICSNYSMYGICKFGPTCRFDHP 223
+C Y G CKFG C++ HP
Sbjct: 117 VCEYYMKTGTCKFGSNCKYHHP 138
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG+C FG C+++HP+
Sbjct: 63 RPDEADCIYYLRTGACGFGDRCRYNHPR 90
>gi|297807679|ref|XP_002871723.1| hypothetical protein ARALYDRAFT_488510 [Arabidopsis lyrata subsp.
lyrata]
gi|297317560|gb|EFH47982.1| hypothetical protein ARALYDRAFT_488510 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 134/290 (46%), Gaps = 54/290 (18%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C Y++RTG CKFG CKF+HPQ S + L G+ + S++ P + Q
Sbjct: 100 LRPNEDDCSYFLRTGHCKFGGTCKFNHPQTQSTNLMVSLRGSP----VYSALQPPTDGQQ 155
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
+ S P S P P W P S +S +
Sbjct: 156 SYSWPRTSFVANP--------------------------PRWQ------DPSSFSSGSQG 183
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
L S + G+ + + +N PERP QP+C++YM TG CK+G CKFHHP++
Sbjct: 184 GLFSSGFHSGN---SVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRD 240
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
R + + +GLP R G+ +C YS YGICKFGP+C+FDHP + N + P S
Sbjct: 241 RQTPAPDCALSSVGLPLRQGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNDASPSPS 300
Query: 240 ILDSSLMNHQAIS-------ATHSIETSPDASSKIPNWVQNSDA-VSVQH 281
SSL AI+ + S+E +P + +P D V QH
Sbjct: 301 ---SSLHQETAITTQLRNLLVSSSVEATP---TTLPETTSAKDTIVDAQH 344
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PER QP+C +Y+ TGTCK+G CKFHHP+ + ++ LG P RP + CS +
Sbjct: 53 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGNDGRVSVNVLGYPLRPNEDDCSYFLR 112
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F+HP
Sbjct: 113 TGHCKFGGTCKFNHP 127
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PER +PDC YY+ TG C++G C+F+HP +R A + I P R GQ C Y
Sbjct: 8 PERHGEPDCAYYIRTGLCRFGFTCRFNHPHDRKLVIATARIKG-EYPERIGQPECEFYLK 66
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F HP
Sbjct: 67 TGTCKFGVTCKFHHP 81
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
+S + P RP++ DC Y++ TG CK+G CKF+HP+
Sbjct: 91 VSVNVLGYPLRPNEDDCSYFLRTGHCKFGGTCKFNHPQ 128
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG C+F+HP L A
Sbjct: 10 RHGEPDCAYYIRTGLCRFGFTCRFNHPHDRKLVIA 44
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 195 PSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
P R G+ C+ Y G+C+FG TCRF+HP+
Sbjct: 8 PERHGEPDCAYYIRTGLCRFGFTCRFNHPH 37
>gi|242056895|ref|XP_002457593.1| hypothetical protein SORBIDRAFT_03g009930 [Sorghum bicolor]
gi|241929568|gb|EES02713.1| hypothetical protein SORBIDRAFT_03g009930 [Sorghum bicolor]
Length = 481
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 133/269 (49%), Gaps = 55/269 (20%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSSLGTALPLTGNASLGSMGSSVLPSS 56
+R EK C YYM+TG CKFG CKFHHP+ P + G PL S+ +PS
Sbjct: 164 LRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGIPVTPGIYPPLQ---------SASVPSP 214
Query: 57 GLQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL--- 112
YA P W + R+P + S + G SY P+++S G+VP GW+ Y ++ P+
Sbjct: 215 -HTYA---PNWQMGRSPAVPGSYIPG--SYTPMMLS--SGMVPLQGWSPYPASVTPVASG 266
Query: 113 ------------------SPTSIA--GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERP 152
S T+IA G+ L YSS G + H PERP
Sbjct: 267 GAQQTVQAGPLYGIGHHGSSTAIAYGGTYLPYSS----STGQSSNNH----QEHGFPERP 318
Query: 153 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 212
QP+C+Y+M TG CK+G CK++HP++ A + L LP RPG C+ Y+ G C
Sbjct: 319 GQPECQYFMRTGDCKFGNTCKYNHPRDWSAPKSNYMFSHLCLPLRPGAQPCAYYAQNGYC 378
Query: 213 KFGPTCRFDHPYAGYPINYGLSLPPLSIL 241
++G C++DHP + Y S PLS +
Sbjct: 379 RYGVACKYDHPMGT--LGYSSSALPLSDM 405
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 9/114 (7%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSA 185
R + G GA+ + ++Q+ PER QP C YY+ TGTCK+G++CK+HHPK+ QS
Sbjct: 100 RGGTEFGGGAK----NGAAQDFPERQGQPVCEYYLKTGTCKFGSNCKYHHPKQDGSVQSV 155
Query: 186 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPL 238
N G P RPG+ CS Y G CKFG TC+F HP + G P+ G+ PPL
Sbjct: 156 ILNNN--GFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGIPVTPGI-YPPL 206
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAIC 203
LPERP + DC YY+ TG C +G C+++HP++R A N P R GQ +C
Sbjct: 67 RLPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQDFPERQGQPVC 126
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y G CKFG C++ HP
Sbjct: 127 EYYLKTGTCKFGSNCKYHHP 146
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E C YY+RTG+C FG C+++HP+
Sbjct: 71 RPGEADCGYYLRTGACGFGERCRYNHPR 98
>gi|224028495|gb|ACN33323.1| unknown [Zea mays]
gi|238011118|gb|ACR36594.1| unknown [Zea mays]
gi|407232628|gb|AFT82656.1| C3H28 transcription factor, partial [Zea mays subsp. mays]
gi|413947003|gb|AFW79652.1| zinc finger CCCH type domain-containing protein ZFN-like 1 isoform
1 [Zea mays]
gi|413947004|gb|AFW79653.1| zinc finger CCCH type domain-containing protein ZFN-like 1 isoform
2 [Zea mays]
gi|413947005|gb|AFW79654.1| zinc finger CCCH type domain-containing protein ZFN-like 1 isoform
3 [Zea mays]
Length = 471
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 124/250 (49%), Gaps = 53/250 (21%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSSLGTALPLTGNASLGSMGSSVLPSS 56
+R EK C YYM+TG CKFG CKFHHP+ P + G PL S +PS
Sbjct: 154 LRLGEKECSYYMKTGQCKFGSTCKFHHPEFGGIPVTPGIYPPLQ---------SPSVPSP 204
Query: 57 GLQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL--- 112
YA P W + R+P + S + G SY P+++S G+VP GW+ Y ++ P+
Sbjct: 205 -HTYA---PNWQMGRSPAVPGSYIPG--SYTPMMIS--SGMVPLQGWSPYPASVNPVASG 256
Query: 113 ------------------SPTSIA--GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERP 152
S T+IA G+ L YSS + G Q H PERP
Sbjct: 257 GAQQTVQAGPLYGIGHHGSSTAIAYGGTYLPYSS-SAGQSSNNHQEH-------GFPERP 308
Query: 153 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 212
QP+C+YYM TG CK+G CK++HP++ + L LP RPG C+ Y+ G C
Sbjct: 309 GQPECQYYMRTGDCKFGTTCKYNHPRDWSTPKSNYMFSHLCLPLRPGAQPCAYYAQNGYC 368
Query: 213 KFGPTCRFDH 222
++G C++DH
Sbjct: 369 RYGVACKYDH 378
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 9/114 (7%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSA 185
R + G GA+ + ++Q+ PER QP C YY+ TGTCK+G++CK+HHPK+ QS
Sbjct: 90 RGGTEFGGGAK----NGAAQDFPERQGQPVCEYYLKTGTCKFGSNCKYHHPKQDGSVQSV 145
Query: 186 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPL 238
N G P R G+ CS Y G CKFG TC+F HP + G P+ G+ PPL
Sbjct: 146 ILNNN--GFPLRLGEKECSYYMKTGQCKFGSTCKFHHPEFGGIPVTPGI-YPPL 196
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQ 200
++ LPERP + DC YY+ TG C +G C+++HP++R A N P R GQ
Sbjct: 54 ANARLPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQDFPERQGQ 113
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
+C Y G CKFG C++ HP
Sbjct: 114 PVCEYYLKTGTCKFGSNCKYHHP 136
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E C YY+RTG+C FG C+++HP+
Sbjct: 61 RPGEADCGYYLRTGACGFGERCRYNHPR 88
>gi|226508854|ref|NP_001150919.1| zinc finger CCCH type domain-containing protein ZFN-like 1 [Zea
mays]
gi|195642960|gb|ACG40948.1| zinc finger CCCH type domain-containing protein ZFN-like 1 [Zea
mays]
gi|414876867|tpg|DAA53998.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 1
isoform 1 [Zea mays]
gi|414876868|tpg|DAA53999.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 1
isoform 2 [Zea mays]
gi|414876869|tpg|DAA54000.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 1
isoform 3 [Zea mays]
Length = 471
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 136/265 (51%), Gaps = 47/265 (17%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYM+TG CKFG CKFHHP+ G +P+T ++ S+ +PS L Y
Sbjct: 154 LRPGEKECSYYMKTGQCKFGSTCKFHHPE---FG-GIPVT-PGIYPALQSASVPSP-LTY 207
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNI---------- 109
A + W + R+P + S + G SY P+++ PS G+VP GW+ Y +
Sbjct: 208 ASN---WQMGRSPAVPGSYIAG--SYTPMVL-PS-GMVPLQGWSPYPAPVNHVASGGAQQ 260
Query: 110 ----GPL-------SPTSIA--GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD 156
GPL S T+IA G+ L YSS G + H PERP QP+
Sbjct: 261 TIQAGPLYGIGHHGSSTAIAYGGTYLPYSS----STGQSSNNH----QEHGFPERPGQPE 312
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+YYM TG CK+G CK++HP++ + L LP RPG C+ Y+ G C++G
Sbjct: 313 CQYYMRTGDCKFGTTCKYNHPQDWSTSKSNYMFSHLCLPLRPGAQPCTYYAQNGYCRYGI 372
Query: 217 TCRFDHPYAGYPINYGLSLPPLSIL 241
C++DHP + Y S PLS +
Sbjct: 373 ACKYDHPMGT--LGYSSSALPLSDM 395
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 65/109 (59%), Gaps = 8/109 (7%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSA 185
R + G GA+ + ++Q PER QP C YY+ TGTCK+G++CK+HHPK+ QS
Sbjct: 90 RGGTEFGGGAK----NGAAQYFPERQGQPVCEYYLKTGTCKFGSNCKYHHPKQDGSVQSV 145
Query: 186 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGL 233
N G P RPG+ CS Y G CKFG TC+F HP + G P+ G+
Sbjct: 146 ILNNN--GFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGIPVTPGI 192
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAICS 204
LPERP + DC YY+ TG C +G C+++HP++R A N P R GQ +C
Sbjct: 58 LPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQYFPERQGQPVCE 117
Query: 205 NYSMYGICKFGPTCRFDHP 223
Y G CKFG C++ HP
Sbjct: 118 YYLKTGTCKFGSNCKYHHP 136
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E C YY+RTG+C FG C+++HP+
Sbjct: 61 RPGEADCGYYLRTGACGFGERCRYNHPR 88
>gi|224035765|gb|ACN36958.1| unknown [Zea mays]
gi|413916354|gb|AFW56286.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 235
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 12/218 (5%)
Query: 12 MRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSSGLQYAGSLPTW 67
MRTGSCKF CKFHHP P++ + P G+ L ++ S PS LQ
Sbjct: 1 MRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPS--LQMWPDQRAL 58
Query: 68 SLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSS 126
+ Q P+L+ SY +V P QG+ P+ W+ Y + P P + + +
Sbjct: 59 NEQHVPFLAP----APSYSGGMVPP-QGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAH 113
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
N A S PERP QP+C++++ +G CKY C++HHP+ R +
Sbjct: 114 MNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPP 173
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
+ + P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 174 AGLSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 211
>gi|226504738|ref|NP_001150480.1| LOC100284111 [Zea mays]
gi|195639552|gb|ACG39244.1| zinc finger CCCH type domain-containing protein ZFN-like 1 [Zea
mays]
Length = 471
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 122/250 (48%), Gaps = 53/250 (21%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSSLGTALPLTGNASLGSMGSSVLPSS 56
+R EK C YYM+TG CKFG CKFHHP+ P + G PL S +PS
Sbjct: 154 LRLGEKECSYYMKTGQCKFGSTCKFHHPEFGGIPVTPGIYPPLQ---------SPSVPSP 204
Query: 57 GLQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL--- 112
YA P W + R+P + S + G SY P+++S G+VP GW+ Y ++ P+
Sbjct: 205 -HTYA---PNWQMGRSPAVPGSYIPG--SYTPMMIS--SGMVPLQGWSPYPASVNPVASG 256
Query: 113 ------------------SPTSIA--GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERP 152
S T+IA G+ L YSS G + H PERP
Sbjct: 257 GAQQTVQAGPLYGIGHHGSSTAIAYGGTYLPYSS----SAGQSSNNH----QEHGFPERP 308
Query: 153 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 212
QP+C+YYM TG CK+G CK++HP++ L LP RPG C+ Y+ G C
Sbjct: 309 GQPECQYYMRTGDCKFGTTCKYNHPRDWSTPKTNYMFSHLCLPLRPGAQPCAYYAQNGYC 368
Query: 213 KFGPTCRFDH 222
++G C++DH
Sbjct: 369 RYGVACKYDH 378
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSA 185
R + G G + + ++Q+ PER QP C YY+ TGTCK+G++CK+HHPK+ QS
Sbjct: 90 RGGTEFGGGTK----NGAAQDFPERQGQPVCEYYLKTGTCKFGSNCKYHHPKQDGSVQSV 145
Query: 186 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPL 238
N G P R G+ CS Y G CKFG TC+F HP + G P+ G+ PPL
Sbjct: 146 ILNNN--GFPLRLGEKECSYYMKTGQCKFGSTCKFHHPEFGGIPVTPGI-YPPL 196
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAIC 203
LPERP + DC YY+ TG C +G C+++HP++R N P R GQ +C
Sbjct: 57 RLPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGTKNGAAQDFPERQGQPVC 116
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y G CKFG C++ HP
Sbjct: 117 EYYLKTGTCKFGSNCKYHHP 136
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E C YY+RTG+C FG C+++HP+
Sbjct: 61 RPGEADCGYYLRTGACGFGERCRYNHPR 88
>gi|22326848|ref|NP_568332.2| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
gi|4689376|gb|AAD27875.1|AF138872_1 zinc finger protein 3 [Arabidopsis thaliana]
gi|9759138|dbj|BAB09623.1| zinc finger protein 3 [Arabidopsis thaliana]
gi|332004923|gb|AED92306.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
Length = 368
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 133/291 (45%), Gaps = 64/291 (21%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R +E C Y++R G CKFG CKF+HPQ S N + GS V S LQ
Sbjct: 132 LRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQST--------NLMVSVRGSPVY--SALQS 181
Query: 61 AGSLPTWSLQRAPYLSS--RLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
P++S R ++++ RLQ + S SQG + + G+++ GN PL ++
Sbjct: 182 LTGQPSYSWSRTSFVANPPRLQDPSGF----ASGSQGGLFSSGFHS--GNSVPLGFYALP 235
Query: 119 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
N+ PERP QP+C++YM TG CK+G CKFHHP+
Sbjct: 236 RENV-------------------------FPERPGQPECQFYMKTGDCKFGTVCKFHHPR 270
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPL 238
+R P G+ +C YS YGICKFGP+C+FDHP + N + P
Sbjct: 271 DR-------QTPPPDCVLSSGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSP 323
Query: 239 SILDSSLMNHQAIS-------ATHSIETSPDASSKIPNWVQNSDA-VSVQH 281
S SSL AI+ + S+E P + +P D V QH
Sbjct: 324 S---SSLHQETAITTELRNLLVSSSVEAKP---TSLPETTSAKDTIVDAQH 368
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PER QP+C +Y+ TGTCK+G CKFHHP+ + + ++ L P RP + CS +
Sbjct: 85 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLR 144
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC+F+HP
Sbjct: 145 IGQCKFGGTCKFNHP 159
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 129 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 188
Q +LG+ M + + PER +PDC YY+ TG C++G+ C+F+HP +R A +
Sbjct: 24 QMNLGSDDTMGV----DGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATAR 79
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
I P R GQ C Y G CKFG TC+F HP I+ +S+ LS
Sbjct: 80 IKG-EYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLS 129
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
RN+ + +++LS P RP++ DC Y++ G CK+G CKF+HP+
Sbjct: 114 RNKAGIDGSVSVNVLS-----YPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQ 160
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG C+F+HP L A
Sbjct: 42 RHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIA 76
>gi|356500274|ref|XP_003518958.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 339
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 118/213 (55%), Gaps = 25/213 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YY++TG CKFG++CKFHHPQP+ GT+LP + + S +P QY
Sbjct: 135 LRLGEKECSYYLKTGQCKFGISCKFHHPQPA--GTSLPTSAPQFYQQVQSPTVPLPE-QY 191
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSP---- 114
G+ + + R P L S +QG +Y P+++SP G+V PGW+ Y + P LSP
Sbjct: 192 GGASTSLRVARPPVLPGSYVQG--AYGPVLLSP--GVVQFPGWSHYSAPVSPVLSPGTQP 247
Query: 115 ----TSIAGSNLIYS-----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 165
TS+ G + S +R L + S + PERP +P+C+YY+ TG
Sbjct: 248 AVGATSLYGVTQLSSPTSAFARPYTPLSSTTGPSGSSLKDRFFPERPGEPECQYYLRTGD 307
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
CK+G C++HHP++ I A + P+GLP RP
Sbjct: 308 CKFGLACRYHHPRDHI---VAPLLSPVGLPLRP 337
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
+ PER +P C+YY+ TGTCK+GA CKFHHPK + + + G P R G+ CS Y
Sbjct: 86 DYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNIYGYPLRLGEKECSYY 145
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG +C+F HP
Sbjct: 146 LKTGQCKFGISCKFHHP 162
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 139 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
H+ ++ PERP P+C YYM TG C YG C+F+HP++R A +AA P R
Sbjct: 33 HLTLGGVESYPERPGVPNCVYYMRTGVCGYGDRCRFNHPRDRAAVAAAVRAT-GDYPERV 91
Query: 199 GQAICSNYSMYGICKFGPTCRFDHPYAG 226
G+ C Y G CKFG +C+F HP G
Sbjct: 92 GEPPCQYYLKTGTCKFGASCKFHHPKNG 119
>gi|302823236|ref|XP_002993272.1| hypothetical protein SELMODRAFT_45667 [Selaginella moellendorffii]
gi|300138942|gb|EFJ05693.1| hypothetical protein SELMODRAFT_45667 [Selaginella moellendorffii]
Length = 294
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 118/234 (50%), Gaps = 20/234 (8%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R + C Y+++TG+CKFG CK+ HP+ + + L +G P + A
Sbjct: 54 RPGQPECQYFLKTGTCKFGSTCKYDHPRDKAG-----IQSRVQLNIVGLPYRPGE-KECA 107
Query: 62 GSLPTWSLQRAPYLSSRLQGTQ-SYMPLIVSP---------SQGIVPAPGWNTYMGNIGP 111
+ T S + ++ + Q + +P I + SQ P T + P
Sbjct: 108 YYMRTGSCKYG--VTCKFHHPQPAVVPSIYAAAAAAAAAGASQPGTPNAATGTPQ-HFQP 164
Query: 112 LSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 171
SPT+ S + S G L AG + H PERP +C+YY+ TG CKYGA
Sbjct: 165 GSPTTADYSPFVPGSPTMG-LPAGLREHKGGGGGDAFPERPGVAECQYYLKTGDCKYGAS 223
Query: 172 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
C+FHHP++RI+ SA + + P+GLP R G CS Y +GICKFGPTC+FDHP A
Sbjct: 224 CRFHHPRDRISASAPTMLSPMGLPLRTGVQPCSYYIRFGICKFGPTCKFDHPLA 277
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 200
++ PERP QP+C+Y++ TGTCK+G+ CK+ HP+++ + + +GLP RPG+
Sbjct: 44 IARGKGEYPERPGQPECQYFLKTGTCKFGSTCKYDHPRDKAGIQSRVQLNIVGLPYRPGE 103
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C+ Y G CK+G TC+F HP
Sbjct: 104 KECAYYMRTGSCKYGVTCKFHHP 126
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PERP + DC YYM TG C +G CKF+HP R +A + G P RPGQ C +
Sbjct: 7 PERPGEQDCVYYMRTGLCAFGMSCKFNHPPNRKLAAAIAR-GKGEYPERPGQPECQYFLK 65
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC++DHP
Sbjct: 66 TGTCKFGSTCKYDHP 80
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
R E+ C YYMRTG C FG++CKF+HP L A+
Sbjct: 9 RPGEQDCVYYMRTGLCAFGMSCKFNHPPNRKLAAAI 44
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + C YY+R G CKFG CKF HP
Sbjct: 248 LRTGVQPCSYYIRFGICKFGPTCKFDHP 275
>gi|302824291|ref|XP_002993790.1| hypothetical protein SELMODRAFT_45658 [Selaginella moellendorffii]
gi|300138386|gb|EFJ05156.1| hypothetical protein SELMODRAFT_45658 [Selaginella moellendorffii]
Length = 295
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 113/233 (48%), Gaps = 17/233 (7%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R + C Y+++TG+CKFG CK+ HP+ + + L +G P + A
Sbjct: 54 RPGQPECQYFLKTGTCKFGSTCKYDHPRDKAG-----IQSRVQLNIVGLPYRPGE-KECA 107
Query: 62 GSLPTWSLQRA---------PYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPL 112
+ T S + P + + + SQ P T + P
Sbjct: 108 YYMRTGSCKYGVTCKFHHPQPAVVPSIYAAAAAAAAAAGASQPGTPNAATGTPQ-HFQPG 166
Query: 113 SPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADC 172
SPT+ S + S G L AG + H PERP +C+YY+ TG CKYGA C
Sbjct: 167 SPTTADYSPFVPGSPTMG-LPAGLREHKGGGGGDAFPERPGVAECQYYLKTGDCKYGASC 225
Query: 173 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
+FHHP++RI+ SA + + P+GLP R G CS Y +GICKFGPTC+FDHP A
Sbjct: 226 RFHHPRDRISASAPTMLSPMGLPLRTGVQPCSYYIRFGICKFGPTCKFDHPLA 278
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 54/83 (65%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 200
++ PERP QP+C+Y++ TGTCK+G+ CK+ HP+++ + + +GLP RPG+
Sbjct: 44 IARGKGEYPERPGQPECQYFLKTGTCKFGSTCKYDHPRDKAGIQSRVQLNIVGLPYRPGE 103
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C+ Y G CK+G TC+F HP
Sbjct: 104 KECAYYMRTGSCKYGVTCKFHHP 126
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
PERP + DC YYM TG C +G CKF+HP R +A + G P RPGQ C +
Sbjct: 7 PERPGEQDCVYYMRTGLCAFGMSCKFNHPPNRKLAAAIAR-GKGEYPERPGQPECQYFLK 65
Query: 209 YGICKFGPTCRFDHP 223
G CKFG TC++DHP
Sbjct: 66 TGTCKFGSTCKYDHP 80
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
R E+ C YYMRTG C FG++CKF+HP L A+
Sbjct: 9 RPGEQDCVYYMRTGLCAFGMSCKFNHPPNRKLAAAI 44
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + C YY+R G CKFG CKF HP
Sbjct: 249 LRTGVQPCSYYIRFGICKFGPTCKFDHP 276
>gi|356554798|ref|XP_003545729.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
[Glycine max]
Length = 507
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 104/227 (45%), Gaps = 69/227 (30%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E CP+YM+TGSCK+GV+C+++HP +++ N + +G+S+LPSS
Sbjct: 315 VRLGEVDCPFYMKTGSCKYGVSCRYNHPDRNAI--------NPPIAGLGASILPSSAANL 366
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
L L+ + Q++ P + +P GI +
Sbjct: 367 NIGL----------LNPAVSAYQAFEPRLSNPMVGI-----------------------A 393
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
IY P+RP Q +C +YM TG CK+G CK+HHP +R
Sbjct: 394 ETIY------------------------PQRPGQIECDFYMKTGVCKFGERCKYHHPIDR 429
Query: 181 ----IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+++ A + P GLP R G IC Y G CKFG TC+FDHP
Sbjct: 430 SALSLSKQATVKLTPAGLPRREGDVICPYYLKTGTCKFGATCKFDHP 476
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
+S+ PERP +PDC Y++ T CK+G+ CKF+HPK + S+ GLP RP +
Sbjct: 189 VTSETPPERPGEPDCPYFLKTQRCKFGSKCKFNHPKVSSENADVSS----GLPERPSEPP 244
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C+ Y G C++G C+F HP
Sbjct: 245 CAFYMKTGKCRYGTACKFHHP 265
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 37/133 (27%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK-----------ERIAQS--------A 185
S LPERP +P C +YM TG C+YG CKFHHPK + +AQ+ A
Sbjct: 233 SSGLPERPSEPPCAFYMKTGKCRYGTACKFHHPKDIQIQLSDDLSQNVAQTQTNSMMGGA 292
Query: 186 ASNIGPL------------GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGL 233
+ P+ GLP R G+ C Y G CK+G +CR++HP IN
Sbjct: 293 TGDTQPIKSLISPSLQNSKGLPVRLGEVDCPFYMKTGSCKYGVSCRYNHPDRN-AIN--- 348
Query: 234 SLPPLSILDSSLM 246
PP++ L +S++
Sbjct: 349 --PPIAGLGASIL 359
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 40/119 (33%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER------------IAQSAASNIGP 191
+S+ LP R + DC +YM TG+CKYG C+++HP I S+A+N+
Sbjct: 309 NSKGLPVRLGEVDCPFYMKTGSCKYGVSCRYNHPDRNAINPPIAGLGASILPSSAANLN- 367
Query: 192 LGL---------------------------PSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+GL P RPGQ C Y G+CKFG C++ HP
Sbjct: 368 IGLLNPAVSAYQAFEPRLSNPMVGIAETIYPQRPGQIECDFYMKTGVCKFGERCKYHHP 426
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 142 SASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHH---------PKERIAQSAASNIGP 191
SAS+ + P+RP + DC +YM T TCK+G CKF H P + + ++ P
Sbjct: 135 SASNMTIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPVWVPEGGIPDWKEVPNVVTSETP 194
Query: 192 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ C + CKFG C+F+HP
Sbjct: 195 ---PERPGEPDCPYFLKTQRCKFGSKCKFNHP 223
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
R+ + CPYY++TG+CKFG CKF HP P +
Sbjct: 450 REGDVICPYYLKTGTCKFGATCKFDHPPPGEV 481
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSS 32
R E CPY+++T CKFG CKF+HP+ SS
Sbjct: 197 RPGEPDCPYFLKTQRCKFGSKCKFNHPKVSS 227
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R EK C +YM T +CKFG +CKF HP
Sbjct: 145 RPGEKDCAHYMLTRTCKFGDSCKFDHP 171
>gi|449485416|ref|XP_004157161.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Cucumis sativus]
Length = 220
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 124 YSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA 182
++ R+ LG+ + + +N+ PERP QP+C++YM TG CK+GA C+FHHP+ER+
Sbjct: 53 FAIRSTDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVL 112
Query: 183 QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 230
+ + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N
Sbjct: 113 PAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFTYN 160
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
R + C +YM+TG CKFG C+FHHP+ L
Sbjct: 81 RPGQPECQFYMKTGDCKFGAVCRFHHPRERVL 112
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R E C +Y R G CKFG +CKF HP
Sbjct: 126 LRPGEPLCIFYSRYGICKFGPSCKFDHP 153
>gi|356523523|ref|XP_003530387.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
[Glycine max]
Length = 508
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 105/227 (46%), Gaps = 67/227 (29%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E CP+YM+TGSCK+GV C+++HP +++ N + +G+S+ PSS
Sbjct: 313 VRLGEVDCPFYMKTGSCKYGVTCRYNHPDRNAI--------NPPIAGLGASIFPSSAANL 364
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
L L+ + Q++ P + +P M +G IA
Sbjct: 365 NIGL----------LNPAVSVYQAFEPRLSNP-------------MSQVG------IA-- 393
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
+ IY P+RP Q +C +YM TG CK+G CK+HHP +R
Sbjct: 394 DTIY------------------------PQRPGQIECDFYMKTGECKFGERCKYHHPIDR 429
Query: 181 ----IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+++ A + P GLP R G IC Y G CKFG TC+FDHP
Sbjct: 430 SAPSLSKQATVKLTPAGLPRREGAVICPYYLKTGTCKFGATCKFDHP 476
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 54/110 (49%), Gaps = 31/110 (28%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE-----------RIAQSAASNI---- 189
S LPERP +P C +YM TG C+YGA CKFHHPK+ +AQ+ ++I
Sbjct: 231 SSGLPERPSEPPCAFYMKTGKCRYGAACKFHHPKDIQIQLSNDSSQTVAQTQTNSIMGWA 290
Query: 190 ----------------GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
GLP R G+ C Y G CK+G TCR++HP
Sbjct: 291 TGDTPPIQSLISPSLQNSKGLPVRLGEVDCPFYMKTGSCKYGVTCRYNHP 340
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
+S+ PERP +PDC Y++ T CK+G+ CKF+HPK + S+ GLP RP +
Sbjct: 187 VTSETPPERPGEPDCPYFLKTQRCKFGSKCKFNHPKVSSENADVSS----GLPERPSEPP 242
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C+ Y G C++G C+F HP
Sbjct: 243 CAFYMKTGKCRYGAACKFHHP 263
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 42/121 (34%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER------------IAQSAASNIGP 191
+S+ LP R + DC +YM TG+CKYG C+++HP I S+A+N+
Sbjct: 307 NSKGLPVRLGEVDCPFYMKTGSCKYGVTCRYNHPDRNAINPPIAGLGASIFPSSAANLN- 365
Query: 192 LGL-----------------------------PSRPGQAICSNYSMYGICKFGPTCRFDH 222
+GL P RPGQ C Y G CKFG C++ H
Sbjct: 366 IGLLNPAVSVYQAFEPRLSNPMSQVGIADTIYPQRPGQIECDFYMKTGECKFGERCKYHH 425
Query: 223 P 223
P
Sbjct: 426 P 426
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 142 SASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL------ 194
SAS+ + P+RP + DC +YM T TCK+G CKF HP + + + + +
Sbjct: 134 SASNMTIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPF-WVPEGGIPDWKEVPIVTSETP 192
Query: 195 PSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ C + CKFG C+F+HP
Sbjct: 193 PERPGEPDCPYFLKTQRCKFGSKCKFNHP 221
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
R+ CPYY++TG+CKFG CKF HP P +
Sbjct: 450 REGAVICPYYLKTGTCKFGATCKFDHPPPGEV 481
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 195 PSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
P RPG+ C++Y + CKFG +C+FDHP+
Sbjct: 142 PQRPGEKDCAHYMLTRTCKFGDSCKFDHPF 171
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSS 32
R E CPY+++T CKFG CKF+HP+ SS
Sbjct: 195 RPGEPDCPYFLKTQRCKFGSKCKFNHPKVSS 225
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R EK C +YM T +CKFG +CKF HP
Sbjct: 144 RPGEKDCAHYMLTRTCKFGDSCKFDHP 170
>gi|297790312|ref|XP_002863055.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308861|gb|EFH39314.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 253
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 115/225 (51%), Gaps = 31/225 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS-LGSMGSSVLPSSGLQ 59
+R+ + C YY++TG CKFG+ CKFHHPQP+ P +A S++P Q
Sbjct: 38 VREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPPASAPQFYPSVQSLMPD---Q 94
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNI------GPLS 113
Y G + + R S +QG +Y P++++P G+VP PGW+ Y P+S
Sbjct: 95 YGGPSSSLRVARTLLPGSYMQG--AYGPMLLTP--GVVPIPGWSPYSSLSDSLLLQAPVS 150
Query: 114 P------------TSIAGSNLIYSSRNQ--GDLGAGAQMHILSASSQNLPERPDQPDCRY 159
P TS+ G + S+ G + + + Q PERP +P+C+Y
Sbjct: 151 PALSPGAQHAVGATSLYGVTQLSSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQY 210
Query: 160 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 204
Y+ TG CK+G CKFHHP++R+ A + P+GLP RP +CS
Sbjct: 211 YLKTGDCKFGTSCKFHHPRDRVPPRANCILSPIGLPLRP---VCS 252
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 37/65 (56%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 218
+Y+ TGTCK+GA CKFHHPK + G P R G CS Y G CKFG TC
Sbjct: 1 FYLKTGTCKFGASCKFHHPKNAGGSMTHVPLNIYGYPVREGDNECSYYLKTGQCKFGITC 60
Query: 219 RFDHP 223
+F HP
Sbjct: 61 KFHHP 65
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 134 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
AG M + + P R +C YY+ TG CK+G CKFHHP+
Sbjct: 22 AGGSMTHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQ 66
>gi|356546492|ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 491
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 120/254 (47%), Gaps = 41/254 (16%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMG--------SSV 52
+RQ EK C YY++TG CKFG CKFHHP P+ G +P + A + + S++
Sbjct: 142 LRQGEKECSYYVKTGQCKFGATCKFHHPVPA--GIQIPPSPFAPVSPLPVPVPSPLYSTM 199
Query: 53 LPSSG--LQYAGSLPTWSLQRAPYLSSRLQGTQS-YMPLIVSPSQGIVPAPGWNTYM--- 106
P G Q G L + R P L L QS Y P+++SP+ +VP GW Y
Sbjct: 200 QPPPGPSSQQIGVL----VARPPMLPGSL--VQSPYGPVVLSPA--MVPISGWGPYQASA 251
Query: 107 -GNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSA-----------SSQNLPERPDQ 154
G + P S GS +Y A + Q PER +Q
Sbjct: 252 SGAVLPSGTPSNVGSAQLYGITQLPSPAAAYPGPYPPSGSPVGPPSSSQKEQAFPERSNQ 311
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMY 209
P+ +YY+ TG K+G +++ P + ++ + P GLP RPG C++Y+ +
Sbjct: 312 PEYQYYLKTGEVKFGPSYRYNPPPDMSVPDMSTPKANVILSPAGLPLRPGAPACTHYAQH 371
Query: 210 GICKFGPTCRFDHP 223
G+CKFG C+FDHP
Sbjct: 372 GVCKFGSACKFDHP 385
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 8/92 (8%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS---NIGPLGLPSRPGQAICSN 205
PER QP C+Y+M T TCK+G+ CK+HHP++ A AA+ ++ G P R G+ CS
Sbjct: 92 PERVGQPVCQYFMRTRTCKFGSSCKYHHPRQAGAGGAAATPVSLNYYGYPLRQGEKECSY 151
Query: 206 YSMYGICKFGPTCRFDHPYAGYPINYGLSLPP 237
Y G CKFG TC+F H P+ G+ +PP
Sbjct: 152 YVKTGQCKFGATCKFHH-----PVPAGIQIPP 178
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 17/106 (16%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
A ++ P+RPD+ DC YY+ TG C +G+ C+F+HP++R + A P R GQ +
Sbjct: 41 AGEESYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAVVAGAERTA-GEHPERVGQPV 99
Query: 203 CSNYSMYGICKFGPTCRFDHP----------------YAGYPINYG 232
C + CKFG +C++ HP Y GYP+ G
Sbjct: 100 CQYFMRTRTCKFGSSCKYHHPRQAGAGGAAATPVSLNYYGYPLRQG 145
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG C FG C+F+HP+
Sbjct: 49 RPDEVDCTYYLRTGFCGFGSRCRFNHPR 76
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R + C Y+MRT +CKFG +CK+HHP+
Sbjct: 94 RVGQPVCQYFMRTRTCKFGSSCKYHHPR 121
>gi|357447361|ref|XP_003593956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355483004|gb|AES64207.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 482
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 120/256 (46%), Gaps = 35/256 (13%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASL-------GSMGSSVL 53
+R EK C Y+++TG CKFG CKF HP P+S+ P + +V
Sbjct: 139 LRPGEKECSYFVKTGQCKFGATCKFDHPVPASVQIPAPSPVPPVSSLHVPVPSPLYPTVQ 198
Query: 54 PSSG--LQYAGSLPTWSLQRAPYLSSRLQGTQS-YMPLIVSPSQGIVPAPGWNTYMGN-I 109
SG Q G L + R P L QS Y P+++SP+ +VP GW Y
Sbjct: 199 TPSGPSSQQIGVL----VARPPLLHGSF--VQSPYGPMVLSPT--MVPFSGWGPYQATAT 250
Query: 110 GPL----SPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS----------QNLPERPDQP 155
P+ SP ++ + L ++ A + LS SS Q+ P P+QP
Sbjct: 251 SPVLPSGSPANVGSTQLYGITQLPSPGNAYTGPYQLSGSSVGPSSRNQNEQSFPASPNQP 310
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
+ YY + ++H P + A + + P GLP RPG A+C++Y+ GICKFG
Sbjct: 311 EYHYYSKPEELPFAPSYRYHKPPDMSAPKVNAVLSPAGLPLRPGAALCTHYAQRGICKFG 370
Query: 216 PTCRFDHPYAGYPINY 231
P C+FDHP A P++Y
Sbjct: 371 PACKFDHPIA--PLSY 384
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Query: 140 ILSASSQNL---PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA-SNIGPLGLP 195
++ A+S+ + PER QP C+YYM T +CK+GA CK+HHPK+ A A+ ++ G P
Sbjct: 79 VIGAASRTVGEYPERVGQPVCQYYMRTRSCKFGASCKYHHPKQTGATDASPVSLNYYGYP 138
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
RPG+ CS + G CKFG TC+FDHP
Sbjct: 139 LRPGEKECSYFVKTGQCKFGATCKFDHP 166
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
+ P+RPD+ DC YY+ TG C +G+ C+F+HP++R A A++ P R GQ +C Y
Sbjct: 43 SYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAAVIGAASRTVGEYPERVGQPVCQYY 102
Query: 207 SMYGICKFGPTCRFDHP--------------YAGYPINYG 232
CKFG +C++ HP Y GYP+ G
Sbjct: 103 MRTRSCKFGASCKYHHPKQTGATDASPVSLNYYGYPLRPG 142
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGN 42
R + C YYMRT SCKFG +CK+HHP+ + A P++ N
Sbjct: 93 RVGQPVCQYYMRTRSCKFGASCKYHHPKQTGATDASPVSLN 133
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG C FG C+F+HP+
Sbjct: 47 RPDEVDCTYYLRTGFCGFGSRCRFNHPR 74
>gi|108862478|gb|ABG21959.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 488
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 107/224 (47%), Gaps = 36/224 (16%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPL----TGNASLGSM-GSSVLPS 55
+R EK CPYYMRTGSCK+ CKFHHP PS++ + P G+A + GSS P+
Sbjct: 283 LRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPN 342
Query: 56 SGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVS---------PSQGIVPAPGWNTY- 105
+ + W QR + ++P I P QG+ P P WN Y
Sbjct: 343 ASI--------WPDQRT--------VNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYH 386
Query: 106 MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 165
+ P P + + + N A S+ PERP QP+C++++ +G
Sbjct: 387 QVPLNPYYPPGVPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGF 446
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 209
CK+ CK+HHP+ + + A + PLGLP +P +CS + ++
Sbjct: 447 CKFRMKCKYHHPRSPVPPAGA--LSPLGLPIKP---VCSFFHLF 485
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
Q +C+YY G CK+G CK+ H KE + ++ LGLP RPG+ C Y G
Sbjct: 239 QEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGS 298
Query: 212 CKFGPTCRFDHP 223
CK+ C+F HP
Sbjct: 299 CKYATNCKFHHP 310
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP + +C YYM TG+CKY +CKFHHP
Sbjct: 281 LPLRPGEKECPYYMRTGSCKYATNCKFHHP 310
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY++ GSC+FG+ CKF+HP
Sbjct: 108 RPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ C+ Y +G C+FG C+F+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>gi|110738176|dbj|BAF01019.1| floral homeotic protein HUA1 [Arabidopsis thaliana]
Length = 522
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 117/249 (46%), Gaps = 44/249 (17%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSS---LGTALPLTGNASLGSMGSSVLP 54
R E C +YM+TG CKFG++CKFHHP+ PSS +G+++ LT +
Sbjct: 266 RPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFT 325
Query: 55 SSGLQYAGSLPTWSLQ-RAPYL----SSRLQGT--------QSYMPLIVSPSQGIVPAPG 101
+ + LP S + P+ S + T +++P + +V +
Sbjct: 326 PALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSS-- 383
Query: 102 WNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYM 161
NT N+G ++P + Y + Q LG ++SA+ P+RP Q +C YYM
Sbjct: 384 -NTANLNLGLVTP-----ATSFYQTLTQPTLG------VISAT---YPQRPGQSECDYYM 428
Query: 162 NTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMYGICKF 214
TG CK+G CKFHHP +R++ Q + G P R G C Y G CK+
Sbjct: 429 KTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKY 488
Query: 215 GPTCRFDHP 223
G TC+FDHP
Sbjct: 489 GATCKFDHP 497
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 99/249 (39%), Gaps = 83/249 (33%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R EK C +YM+T +CKFG +C+F HP +P
Sbjct: 172 RAGEKDCTHYMQTRTCKFGESCRFDHP------IWVP----------------------E 203
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
G +P W + AP V P++ PG P P I
Sbjct: 204 GGIPDW--KEAP----------------VVPNEEYPERPG--------EPDCPYYIKTQR 237
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
Y S+ + + +S +Q+ LPERP +P C +YM TG CK+G CKFHHPK+
Sbjct: 238 CKYGSKCK--FNHPREEAAVSVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDI 295
Query: 181 IAQSAASNIG--------------------------PLGLPSRPGQAICSNYSMYGICKF 214
S++ +IG GLP R G+ C Y G CK+
Sbjct: 296 QLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKY 355
Query: 215 GPTCRFDHP 223
G TCR++HP
Sbjct: 356 GATCRYNHP 364
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 54/196 (27%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTG--NASLGSMGSSVLPSSGL 58
+R E CP+Y++TGSCK+G C+++HP+ ++ +P N SL S ++ L + GL
Sbjct: 337 VRSGEVDCPFYLKTGSCKYGATCRYNHPERTAF---IPQAAGVNYSLVSSNTANL-NLGL 392
Query: 59 QYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
+ S+ + P+ G++ A TY G
Sbjct: 393 --------------------VTPATSFYQTLTQPTLGVISA----TYPQRPG-------Q 421
Query: 119 GSNLIYSSRNQGDLGAGAQMH----ILSASSQNLPERPDQP-------------DCRYYM 161
Y + G + H LSA ++ P++P+ +C YYM
Sbjct: 422 SECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYM 481
Query: 162 NTGTCKYGADCKFHHP 177
TGTCKYGA CKF HP
Sbjct: 482 KTGTCKYGATCKFDHP 497
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKERIAQSAASNIGP-LGLPSRPGQAIC 203
P+R + DC +YM T TCK+G C+F H P+ I + + P P RPG+ C
Sbjct: 170 PQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDC 229
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y CK+G C+F+HP
Sbjct: 230 PYYIKTQRCKYGSKCKFNHP 249
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
R+ +CPYYM+TG+CK+G CKF HP P +
Sbjct: 471 REGALNCPYYMKTGTCKYGATCKFDHPPPGEV 502
>gi|12321969|gb|AAG51026.1|AC069474_25 zinc finger protein, putative, 5' partial; 146-2518 [Arabidopsis
thaliana]
Length = 328
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 128/285 (44%), Gaps = 56/285 (19%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSS---LGTALPLTGNASLGSMGSSVLP 54
R E C +YM+TG CKFG++CKFHHP+ PSS +G+++ LT +
Sbjct: 72 RPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFT 131
Query: 55 SSGLQYAGSLPTWSLQ-RAPYL----SSRLQGT--------QSYMPLIVSPSQGIVPAPG 101
+ + LP S + P+ S + T +++P + +V +
Sbjct: 132 PALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSS-- 189
Query: 102 WNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYM 161
NT N+G ++P + Y + Q LG ++SA+ P+RP Q +C YYM
Sbjct: 190 -NTANLNLGLVTPATS-----FYQTLTQPTLG------VISAT---YPQRPGQSECDYYM 234
Query: 162 NTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMYGICKF 214
TG CK+G CKFHHP +R++ Q + G P R G C Y G CK+
Sbjct: 235 KTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKY 294
Query: 215 GPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIET 259
G TC+FDHP PP ++ + A AT++ T
Sbjct: 295 GATCKFDHP------------PPGEVMAKTTSEADAAGATNTDTT 327
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 204
++ PERP +PDC YY+ T CKYG+ CKF+HP+E A S + LP RP + +C+
Sbjct: 23 NEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD---SLPERPSEPMCT 79
Query: 205 NYSMYGICKFGPTCRFDHP 223
Y G CKFG +C+F HP
Sbjct: 80 FYMKTGKCKFGLSCKFHHP 98
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 56/110 (50%), Gaps = 27/110 (24%)
Query: 141 LSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG--------- 190
+S +Q+ LPERP +P C +YM TG CK+G CKFHHPK+ S++ +IG
Sbjct: 61 VSVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEP 120
Query: 191 -----------------PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
GLP R G+ C Y G CK+G TCR++HP
Sbjct: 121 DATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHP 170
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 80/194 (41%), Gaps = 50/194 (25%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E CP+Y++TGSCK+G C+++HP+ ++ +P + + S+ ++ L
Sbjct: 143 VRSGEVDCPFYLKTGSCKYGATCRYNHPERTAF---IPQAAGVNYSLVSSN---TANLNL 196
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
P S + + P+ G++ A TY G
Sbjct: 197 GLVTPATSFYQT----------------LTQPTLGVISA----TYPQRPG-------QSE 229
Query: 121 NLIYSSRNQGDLGAGAQMH----ILSASSQNLPERPDQP-------------DCRYYMNT 163
Y + G + H LSA ++ P++P+ +C YYM T
Sbjct: 230 CDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKT 289
Query: 164 GTCKYGADCKFHHP 177
GTCKYGA CKF HP
Sbjct: 290 GTCKYGATCKFDHP 303
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E CPYY++T CK+G CKF+HP+
Sbjct: 29 RPGEPDCPYYIKTQRCKYGSKCKFNHPR 56
>gi|22331028|ref|NP_187874.2| zinc finger CCCH domain-containing protein 37 [Arabidopsis
thaliana]
gi|75249536|sp|Q941Q3.1|C3H37_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 37;
Short=AtC3H37; AltName: Full=ENHANCER OF AG-4 protein 1
gi|16797661|gb|AAK01470.1| floral homeotic protein HUA1 [Arabidopsis thaliana]
gi|332641710|gb|AEE75231.1| zinc finger CCCH domain-containing protein 37 [Arabidopsis
thaliana]
Length = 524
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 117/249 (46%), Gaps = 44/249 (17%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSS---LGTALPLTGNASLGSMGSSVLP 54
R E C +YM+TG CKFG++CKFHHP+ PSS +G+++ LT +
Sbjct: 268 RPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFT 327
Query: 55 SSGLQYAGSLPTWSLQ-RAPYL----SSRLQGT--------QSYMPLIVSPSQGIVPAPG 101
+ + LP S + P+ S + T +++P + +V +
Sbjct: 328 PALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSS-- 385
Query: 102 WNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYM 161
NT N+G ++P + Y + Q LG ++SA+ P+RP Q +C YYM
Sbjct: 386 -NTANLNLGLVTP-----ATSFYQTLTQPTLG------VISAT---YPQRPGQSECDYYM 430
Query: 162 NTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMYGICKF 214
TG CK+G CKFHHP +R++ Q + G P R G C Y G CK+
Sbjct: 431 KTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKY 490
Query: 215 GPTCRFDHP 223
G TC+FDHP
Sbjct: 491 GATCKFDHP 499
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 99/249 (39%), Gaps = 83/249 (33%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R EK C +YM+T +CKFG +C+F HP +P
Sbjct: 174 RAGEKDCTHYMQTRTCKFGESCRFDHP------IWVP----------------------E 205
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
G +P W + AP V P++ PG P P I
Sbjct: 206 GGIPDW--KEAP----------------VVPNEEYPERPG--------EPDCPYYIKTQR 239
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
Y S+ + + +S +Q+ LPERP +P C +YM TG CK+G CKFHHPK+
Sbjct: 240 CKYGSKCK--FNHPREEAAVSVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDI 297
Query: 181 IAQSAASNIG--------------------------PLGLPSRPGQAICSNYSMYGICKF 214
S++ +IG GLP R G+ C Y G CK+
Sbjct: 298 QLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKY 357
Query: 215 GPTCRFDHP 223
G TCR++HP
Sbjct: 358 GATCRYNHP 366
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 54/196 (27%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTG--NASLGSMGSSVLPSSGL 58
+R E CP+Y++TGSCK+G C+++HP+ ++ +P N SL S ++ L + GL
Sbjct: 339 VRSGEVDCPFYLKTGSCKYGATCRYNHPERTAF---IPQAAGVNYSLVSSNTANL-NLGL 394
Query: 59 QYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
+ S+ + P+ G++ A TY G
Sbjct: 395 --------------------VTPATSFYQTLTQPTLGVISA----TYPQRPG-------Q 423
Query: 119 GSNLIYSSRNQGDLGAGAQMH----ILSASSQNLPERPDQP-------------DCRYYM 161
Y + G + H LSA ++ P++P+ +C YYM
Sbjct: 424 SECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYM 483
Query: 162 NTGTCKYGADCKFHHP 177
TGTCKYGA CKF HP
Sbjct: 484 KTGTCKYGATCKFDHP 499
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKERIAQSAASNIGP-LGLPSRPGQAIC 203
P+R + DC +YM T TCK+G C+F H P+ I + + P P RPG+ C
Sbjct: 172 PQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDC 231
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y CK+G C+F+HP
Sbjct: 232 PYYIKTQRCKYGSKCKFNHP 251
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
R+ +CPYYM+TG+CK+G CKF HP P +
Sbjct: 473 REGALNCPYYMKTGTCKYGATCKFDHPPPGEV 504
>gi|168000422|ref|XP_001752915.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696078|gb|EDQ82419.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 56/75 (74%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 207
PERP QP+C+YYM TG CK+G C++HHPK+R S ++ P+GLP RPG CS Y+
Sbjct: 4 FPERPGQPECQYYMKTGDCKFGTTCRYHHPKDRTTPSPTCHLSPIGLPLRPGNLPCSFYT 63
Query: 208 MYGICKFGPTCRFDH 222
YGICKFGPTC+FDH
Sbjct: 64 RYGICKFGPTCKFDH 78
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R + C YYM+TG CKFG C++HHP+
Sbjct: 7 RPGQPECQYYMKTGDCKFGTTCRYHHPK 34
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 18/30 (60%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPGQ C Y G CKFG TCR+ HP
Sbjct: 4 FPERPGQPECQYYMKTGDCKFGTTCRYHHP 33
>gi|225462348|ref|XP_002269152.1| PREDICTED: zinc finger CCCH domain-containing protein 37 [Vitis
vinifera]
gi|297736083|emb|CBI24121.3| unnamed protein product [Vitis vinifera]
Length = 535
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 106/252 (42%), Gaps = 44/252 (17%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA--------LPLTGNASLGSMGSSVL 53
R E C +Y++TG CKFG CKFHHP+ + + TG G+ G L
Sbjct: 261 RPSELPCAFYVKTGKCKFGATCKFHHPKDIQIASTGKNNADGEQAETGAKGAGTTGDVKL 320
Query: 54 P----------SSGL-QYAGS------LPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGI 96
P S GL G L T S + + P + I
Sbjct: 321 PVSVTPALVHNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYNHPDRNAINPPAAAIGHAI 380
Query: 97 VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD 156
V +P N +G + P+ TSI R +G G ++ P+RP Q +
Sbjct: 381 VASPAANLNVGVVNPV--TSILHP---IDPRLSQTMGVGPTIY---------PQRPGQME 426
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAAS-----NIGPLGLPSRPGQAICSNYSMYGI 211
C +YM TG CK+G CKFHHP +R A +A + G P R G IC Y G
Sbjct: 427 CDFYMKTGECKFGERCKFHHPIDRSAPTATKLQQNIRLTLAGFPRREGTIICPFYLKTGT 486
Query: 212 CKFGPTCRFDHP 223
CK+G TC+FDHP
Sbjct: 487 CKYGVTCKFDHP 498
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA-SNIGPLGLPSRPG 199
+ A+++ LP+RP +PDC Y+M T CK+G CKF+HPK++I A N LP RP
Sbjct: 204 IVAANEFLPQRPGEPDCPYFMKTQKCKFGHKCKFNHPKDQIISLGAPENTDVFVLPERPS 263
Query: 200 QAICSNYSMYGICKFGPTCRFDHP 223
+ C+ Y G CKFG TC+F HP
Sbjct: 264 ELPCAFYVKTGKCKFGATCKFHHP 287
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 98/260 (37%), Gaps = 64/260 (24%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E CPY+M+T CKFG CKF+HP+ + P + + S LP +
Sbjct: 214 RPGEPDCPYFMKTQKCKFGHKCKFNHPKDQIISLGAPENTDVFVLPERPSELPCAFYVKT 273
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
G + T + P + + G N G + T G+
Sbjct: 274 GKC-------------KFGATCKFH----HPKDIQIASTGKNNADGE---QAETGAKGAG 313
Query: 122 LIYSSRNQGDLGAGAQMH-ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
GD+ + L +S+ LP R + DC +Y+ TG+CKYGA C+++HP
Sbjct: 314 ------TTGDVKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYNHPDRN 367
Query: 181 ------------IAQSAASN-------------------------IGPLGLPSRPGQAIC 203
I S A+N +GP P RPGQ C
Sbjct: 368 AINPPAAAIGHAIVASPAANLNVGVVNPVTSILHPIDPRLSQTMGVGPTIYPQRPGQMEC 427
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y G CKFG C+F HP
Sbjct: 428 DFYMKTGECKFGERCKFHHP 447
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 67/151 (44%), Gaps = 49/151 (32%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKE-RIAQSAASN------------------ 188
LPERP + C +Y+ TG CK+GA CKFHHPK+ +IA + +N
Sbjct: 258 LPERPSELPCAFYVKTGKCKFGATCKFHHPKDIQIASTGKNNADGEQAETGAKGAGTTGD 317
Query: 189 ------IGPL------GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLP 236
+ P GLP R G+ C Y G CK+G TCR++HP
Sbjct: 318 VKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYNHP------------- 364
Query: 237 PLSILDSSLMNHQAISATHSIETSPDASSKI 267
D + +N A + H+I SP A+ +
Sbjct: 365 -----DRNAINPPAAAIGHAIVASPAANLNV 390
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 15/177 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MR E CP+Y++TGSCK+G C+++HP +++ G+A + S P++ L
Sbjct: 337 MRLGEVDCPFYLKTGSCKYGATCRYNHPDRNAINPPAAAIGHAIVAS------PAANLNV 390
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
P S+ + RL T P I G + + YM
Sbjct: 391 GVVNPVTSILHP--IDPRLSQTMGVGPTIYPQRPGQMEC---DFYMKT----GECKFGER 441
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
+ ++ A + + P R C +Y+ TGTCKYG CKF HP
Sbjct: 442 CKFHHPIDRSAPTATKLQQNIRLTLAGFPRREGTIICPFYLKTGTCKYGVTCKFDHP 498
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 144 SSQNLP---ERPDQPDCRYYMNTGTCKYGADCKFHHPK----------ERIAQSAASNIG 190
S+ NLP +RP + DC +YM T TCK+G CKF HP + + AA+
Sbjct: 152 SASNLPIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPIVAANEF- 210
Query: 191 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
LP RPG+ C + CKFG C+F+HP
Sbjct: 211 ---LPQRPGEPDCPYFMKTQKCKFGHKCKFNHP 240
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
R+ CP+Y++TG+CK+GV CKF HP P +
Sbjct: 472 REGTIICPFYLKTGTCKYGVTCKFDHPPPGEV 503
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R EK C +YM T +CKFG +CKF HP
Sbjct: 162 RPGEKDCAHYMLTRTCKFGDSCKFDHP 188
>gi|356557823|ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 481
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMG------SSVLP 54
+R EK C YY++TG CKFG CKFHHP P+ + P S + S++ P
Sbjct: 139 LRPGEKECSYYVKTGQCKFGATCKFHHPVPAGVQIPAPSPVAPSPLPVPVPSPLYSTMQP 198
Query: 55 SSG--LQYAGSLPTWSLQRAPYLSSRLQGTQS-YMPLIVSPSQGIVPAPGWNTY-MGNIG 110
G Q G L + R P L L QS Y P+++SP+ +VP GW Y +G +
Sbjct: 199 PPGPSSQQIGVL----VARPPMLPGSL--VQSPYGPVVLSPA--MVPISGWGPYQVGAVH 250
Query: 111 PLSPTSIAGSNLIYSSRNQGDLGAG-----------AQMHILSASSQNLPERPDQPDCRY 159
P S GS +Y A S Q PER +QP+ +Y
Sbjct: 251 PSGTPSNVGSPQLYGITQLPSPVAAYPGPYQPSGSPVGPSSSSQKEQAFPERSNQPEYQY 310
Query: 160 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA-ICSNYSMYGICKFGPTC 218
Y TG K+G +++ P + A A + P GLP RPG A C +Y+ +G+CKFG C
Sbjct: 311 YPKTGEVKFGPSYRYNPPPDMSAPKANVILSPAGLPLRPGAAPACIHYAQHGVCKFGSAC 370
Query: 219 RFDH 222
+FDH
Sbjct: 371 KFDH 374
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS-NIGPLGLPSRPGQAI 202
++ PER QP C+YYM T TCK+G+ CK+HHP++ +A ++ G P RPG+
Sbjct: 86 TTGEYPERVGQPVCQYYMRTRTCKFGSSCKYHHPRQAGGTAATPMSLSYYGYPLRPGEKE 145
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
CS Y G CKFG TC+F HP
Sbjct: 146 CSYYVKTGQCKFGATCKFHHP 166
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 137 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 196
Q+ + A ++ P+RPD+ DC YY+ TG C +G+ C+F+HP++R A + A P
Sbjct: 34 QLGMGGAGEESYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAAVAGAERTT-GEYPE 92
Query: 197 RPGQAICSNYSMYGICKFGPTCRFDHP--------------YAGYPINYG 232
R GQ +C Y CKFG +C++ HP Y GYP+ G
Sbjct: 93 RVGQPVCQYYMRTRTCKFGSSCKYHHPRQAGGTAATPMSLSYYGYPLRPG 142
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
+S S P RP + +C YY+ TG CK+GA CKFHHP
Sbjct: 130 MSLSYYGYPLRPGEKECSYYVKTGQCKFGATCKFHHP 166
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG C FG C+F+HP+
Sbjct: 48 RPDEVDCTYYLRTGFCGFGSRCRFNHPR 75
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 178 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+E + Q G P RP + C+ Y G C FG CRF+HP
Sbjct: 29 EEPMWQLGMGGAGEESYPQRPDEVDCTYYLRTGFCGFGSRCRFNHP 74
>gi|414876864|tpg|DAA53995.1| TPA: hypothetical protein ZEAMMB73_505725 [Zea mays]
gi|414876865|tpg|DAA53996.1| TPA: hypothetical protein ZEAMMB73_505725 [Zea mays]
Length = 220
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 207
PERP QP+C +YM TGTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+
Sbjct: 55 FPERPGQPECEHYMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQPCAYYA 114
Query: 208 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKI 267
+G CKFGPTC+FDHP + P SI SSL + S +P +
Sbjct: 115 HHGYCKFGPTCKFDHP---------MGTPNYSISTSSLTDVPIAPYPQSFPVTP-----M 160
Query: 268 PNWVQNSD 275
P+++ +SD
Sbjct: 161 PSYLPSSD 168
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R + C +YM+TG+CK+G ACK+HHPQ
Sbjct: 58 RPGQPECEHYMKTGTCKYGAACKYHHPQ 85
>gi|297834072|ref|XP_002884918.1| enhancer of ag-4 1 [Arabidopsis lyrata subsp. lyrata]
gi|297330758|gb|EFH61177.1| enhancer of ag-4 1 [Arabidopsis lyrata subsp. lyrata]
Length = 519
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 114/252 (45%), Gaps = 50/252 (19%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSSL---GTALPLTGNASL--------- 45
R E C +YM+TG CKFG+ CKFHHP+ PSS G+++ LT
Sbjct: 265 RPSEPMCTFYMKTGKCKFGLTCKFHHPKDIQVPSSSQDNGSSVGLTSEPDATNNPHVTFT 324
Query: 46 -----GSMGSSVLPSSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAP 100
S G V P + L T S + +++P + +V +
Sbjct: 325 PALYHNSKGLPVRPGE-VDCPFYLKTGSCKYGATCRYNHPERTAFIPQATGINYSLVSS- 382
Query: 101 GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYY 160
NT N+G ++P + Y + Q LGA LSA+ P+RP Q +C YY
Sbjct: 383 --NTANLNLGMVTPATS-----FYQTLTQPTLGA------LSAT---YPQRPGQSECDYY 426
Query: 161 MNTGTCKYGADCKFHHPKERIAQSAASN---------IGPLGLPSRPGQAICSNYSMYGI 211
M TG CK+G C+FHHP +R+ SA SN + G P R G C Y G
Sbjct: 427 MKTGECKFGERCRFHHPADRL--SATSNQASQQPNVKLSLAGYPRREGALNCPYYMKTGT 484
Query: 212 CKFGPTCRFDHP 223
CK+G TC+FDHP
Sbjct: 485 CKYGATCKFDHP 496
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 100/249 (40%), Gaps = 83/249 (33%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R EK C +YM+T +CKFG +CKF HP +P
Sbjct: 171 RAGEKDCTHYMQTRTCKFGDSCKFDHP------IWVP----------------------E 202
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
G +P W + AP V P++ PG P P I
Sbjct: 203 GGIPDW--KEAP----------------VVPNEEYPERPG--------EPDCPYYIKTQR 236
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHPKE- 179
Y SR + + +S +Q+ LPERP +P C +YM TG CK+G CKFHHPK+
Sbjct: 237 CKYGSRCK--FNHPREEAAVSVETQDALPERPSEPMCTFYMKTGKCKFGLTCKFHHPKDI 294
Query: 180 ---RIAQSAASNIG----------------------PLGLPSRPGQAICSNYSMYGICKF 214
+Q S++G GLP RPG+ C Y G CK+
Sbjct: 295 QVPSSSQDNGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRPGEVDCPFYLKTGSCKY 354
Query: 215 GPTCRFDHP 223
G TCR++HP
Sbjct: 355 GATCRYNHP 363
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKERIAQSAASNIGP-LGLPSRPGQAIC 203
P+R + DC +YM T TCK+G CKF H P+ I + + P P RPG+ C
Sbjct: 169 PQRAGEKDCTHYMQTRTCKFGDSCKFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDC 228
Query: 204 SNYSMYGICKFGPTCRFDHP 223
Y CK+G C+F+HP
Sbjct: 229 PYYIKTQRCKYGSRCKFNHP 248
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
R+ +CPYYM+TG+CK+G CKF HP P +
Sbjct: 470 REGALNCPYYMKTGTCKYGATCKFDHPPPGEV 501
>gi|357478675|ref|XP_003609623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510678|gb|AES91820.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 582
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 134/322 (41%), Gaps = 109/322 (33%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSS--LGTALPLTGNASL-----GSMGSSVL 53
+R EK C YY++TG CKFG CKFHHPQP+ + P+ + L + +V
Sbjct: 136 LRVGEKECSYYVKTGQCKFGATCKFHHPQPAGGQMIAPSPVPQVSPLPMPVPSPIYQTVQ 195
Query: 54 PSSG--LQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIG 110
P SG Q G L + R P L S +QG Y P+++SP+ +VP GW+ Y G
Sbjct: 196 PPSGPSQQQYGVL----VARPPLLHGSFVQG--PYGPMVMSPT--MVPFSGWSPYQAPAG 247
Query: 111 -PLSPTS---IAGSNLIY--------------------------------------SSRN 128
P+ P+S GS +Y S +
Sbjct: 248 SPVLPSSNPLSVGSTQLYGITQLPSPTTAYTQLPSPTTAYTGPYQSSGPSAGPYQSSGPS 307
Query: 129 QGDLGAGAQMHILSASSQ---NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 185
G + S SSQ +LPERPDQ +C++YM TG CK+G+ C++HHP + A
Sbjct: 308 AGPYQSSGPSTGPSGSSQKEHSLPERPDQQECQHYMKTGDCKFGSTCRYHHPPDMGAPKV 367
Query: 186 ASNIGPLGLPSRP--------------------------------------------GQA 201
N+ P+GLP RP G
Sbjct: 368 --NLSPIGLPLRPLMLFRCILLHASTKPHIILTWLFVFIDLFGFISPLMQYFVFGLQGAQ 425
Query: 202 ICSNYSMYGICKFGPTCRFDHP 223
C++Y+ G CKFG C+FDHP
Sbjct: 426 PCTHYTQRGFCKFGSACKFDHP 447
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R++G + A++ + PER QP C+YY TG+CK+GA CK+HHP++ +
Sbjct: 73 RDRGAVIGAARI------AGEYPERVGQPVCQYYARTGSCKFGASCKYHHPRQAAGTTPP 126
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
++ G P R G+ CS Y G CKFG TC+F HP
Sbjct: 127 VSLNCYGYPLRVGEKECSYYVKTGQCKFGATCKFHHP 163
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
++ P+RPD+ DC YY+ TG C YG+ C+F+HP++R A A+ I P R GQ +C
Sbjct: 41 ESYPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARIA-GEYPERVGQPVCQY 99
Query: 206 YSMYGICKFGPTCRFDHP 223
Y+ G CKFG +C++ HP
Sbjct: 100 YARTGSCKFGASCKYHHP 117
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK----ERIAQSAASNIGPLGLP 195
+S + P R + +C YY+ TG CK+GA CKFHHP+ + IA S + PL +P
Sbjct: 127 VSLNCYGYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPAGGQMIAPSPVPQVSPLPMP 185
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGN 42
R + C YY RTGSCKFG +CK+HHP+ + GT P++ N
Sbjct: 91 RVGQPVCQYYARTGSCKFGASCKYHHPR-QAAGTTPPVSLN 130
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG C +G C+F+HP+
Sbjct: 46 RPDEADCIYYLRTGFCGYGSRCRFNHPR 73
>gi|224032243|gb|ACN35197.1| unknown [Zea mays]
Length = 429
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 100/203 (49%), Gaps = 12/203 (5%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSS 56
+R EK CPYYMRTGSCKF CKFHHP P++ + P G+ L ++ S PS
Sbjct: 132 LRPGEKECPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPS- 190
Query: 57 GLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTY-MGNIGPLSPT 115
LQ + Q P+L+ SY +V P QG+ P+ W+ Y + P P
Sbjct: 191 -LQMWPDQRALNEQHVPFLAP----APSYSGGMVPP-QGMYPSSDWSGYHQVPLNPYYPP 244
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+ + + N A S PERP QP+C++++ +G CKY C++H
Sbjct: 245 GVPFPHFPAAHMNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYH 304
Query: 176 HPKERIAQSAASNIGPLGLPSRP 198
HP+ R + + + P+GLP +P
Sbjct: 305 HPRSRQSAPPPAGLSPIGLPIKP 327
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGLPSRPGQAICSNYSMYGI 211
Q +C+YY G CK+G CK+ H + ++ + + LGLP RPG+ C Y G
Sbjct: 88 QEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKECPYYMRTGS 147
Query: 212 CKFGPTCRFDHP 223
CKF C+F HP
Sbjct: 148 CKFATNCKFHHP 159
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 133 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
G ++ + LP RP + +C YYM TG+CK+ +CKFHHP
Sbjct: 115 GGKTEVEKAELNFLGLPLRPGEKECPYYMRTGSCKFATNCKFHHP 159
>gi|224109138|ref|XP_002315096.1| predicted protein [Populus trichocarpa]
gi|222864136|gb|EEF01267.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 121/280 (43%), Gaps = 51/280 (18%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASL-GSMGSSVLPSSGLQY 60
R E C +YM+TG CKFG +CKFHHP+ +PL+G + G SV+ + G+
Sbjct: 267 RPSEPPCAFYMKTGKCKFGASCKFHHPK----DIQIPLSGLGNDNGVQTDSVVKNEGI-- 320
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGW------------------ 102
G + P L +G +P+ + G V P +
Sbjct: 321 TGDVDVIYSPVTPALHHNSKG----LPIRL----GEVDCPFYLKTGSCKYGATCRYNHPE 372
Query: 103 ----NTYMGNIG-PLSPTSIAGSNL-IYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD 156
N IG P+ S+A N +++ ++ +L P+RP Q +
Sbjct: 373 RTAINPPAAAIGHPIVAPSLANLNFGVFNPAASIYQTIDPRLSMLGVGPTFYPQRPGQTE 432
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIA------QSAASNIGPLGLPSRPGQAICSNYSMYG 210
C +YM TG CK+G CKFHHP +R A Q + GLP R G C Y G
Sbjct: 433 CDFYMKTGECKFGERCKFHHPIDRSAPTEKQIQQQTVKLTLAGLPRREGAVHCPYYMKTG 492
Query: 211 ICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA 250
CK+G TC+FDHP G + S LD++++ +A
Sbjct: 493 ACKYGATCKFDHPPPGEVMAVATS------LDAAVLGAEA 526
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 54/83 (65%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 200
L A+S+ PERP +PDC Y++ T CKYG +CKF+HPKE+++ + N LP RP +
Sbjct: 211 LIATSETFPERPGEPDCPYFLKTQRCKYGLNCKFNHPKEKLSLGDSENSSVSALPERPSE 270
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C+ Y G CKFG +C+F HP
Sbjct: 271 PPCAFYMKTGKCKFGASCKFHHP 293
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 106/264 (40%), Gaps = 73/264 (27%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG-SMGSSVLPSSGLQY 60
R E CPY+++T CK+G+ CKF+HP+ SLG S SSV S L
Sbjct: 221 RPGEPDCPYFLKTQRCKYGLNCKFNHPKE-----------KLSLGDSENSSV---SALPE 266
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
S P + + + P + +P G +GN + S+
Sbjct: 267 RPSEPPCAFYMKTGKCKFGASCKFHHPKDIQ-----IPLSG----LGNDNGVQTDSVV-- 315
Query: 121 NLIYSSRNQGDLGAGAQMH-----ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+N+G G ++ L +S+ LP R + DC +Y+ TG+CKYGA C+++
Sbjct: 316 ------KNEGITGDVDVIYSPVTPALHHNSKGLPIRLGEVDCPFYLKTGSCKYGATCRYN 369
Query: 176 HPKER-------------IAQSAAS-----------------------NIGPLGLPSRPG 199
HP+ +A S A+ +GP P RPG
Sbjct: 370 HPERTAINPPAAAIGHPIVAPSLANLNFGVFNPAASIYQTIDPRLSMLGVGPTFYPQRPG 429
Query: 200 QAICSNYSMYGICKFGPTCRFDHP 223
Q C Y G CKFG C+F HP
Sbjct: 430 QTECDFYMKTGECKFGERCKFHHP 453
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 85/221 (38%), Gaps = 53/221 (23%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E CP+Y++TGSCK+G C+++HP+ +++ N ++G ++
Sbjct: 344 IRLGEVDCPFYLKTGSCKYGATCRYNHPERTAI--------NPPAAAIGHPIV------- 388
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
AP L++ G + +P+ I M +GP G
Sbjct: 389 -----------APSLANLNFG-------VFNPAASIYQTIDPRLSMLGVGPTFYPQRPGQ 430
Query: 121 NL--IYSSRNQGDLGAGAQMH----------------ILSASSQNLPERPDQPDCRYYMN 162
Y + G + H + + LP R C YYM
Sbjct: 431 TECDFYMKTGECKFGERCKFHHPIDRSAPTEKQIQQQTVKLTLAGLPRREGAVHCPYYMK 490
Query: 163 TGTCKYGADCKFHH--PKERIAQSAASNIGPLGLPSRPGQA 201
TG CKYGA CKF H P E +A + + + LG + QA
Sbjct: 491 TGACKYGATCKFDHPPPGEVMAVATSLDAAVLGAEAGTSQA 531
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 14/85 (16%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPK----------ERIAQSAASNIGPLGLPSRP 198
P+RP + DC +YM T TCK+G CKF HP + + A S P RP
Sbjct: 167 PQRPGEKDCAHYMLTRTCKFGDTCKFDHPVWVPEGGIPDWKEVPLIATSET----FPERP 222
Query: 199 GQAICSNYSMYGICKFGPTCRFDHP 223
G+ C + CK+G C+F+HP
Sbjct: 223 GEPDCPYFLKTQRCKYGLNCKFNHP 247
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R EK C +YM T +CKFG CKF HP
Sbjct: 169 RPGEKDCAHYMLTRTCKFGDTCKFDHP 195
>gi|449461124|ref|XP_004148293.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
[Cucumis sativus]
Length = 527
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 116/257 (45%), Gaps = 54/257 (21%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E C +Y++TG+CKFG+ CKFHHP+ + L+G S + ++ + + A
Sbjct: 259 RPSEPLCAFYVKTGNCKFGINCKFHHPKDIQI-----LSGEEYGNSEQTLMVKTE--ERA 311
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNT---YMGN---------- 108
G + L + P S P I+ S+G+ PG Y+
Sbjct: 312 GD---FKLVKPPI---------SLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCR 359
Query: 109 --------IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMH----------ILSASSQNLPE 150
I P +P + + + ++ N G + ++ +L + S P+
Sbjct: 360 YNHPDRNAINPSTPAMVHPAMVSTANMNTGFVNPSNAIYQAVDPRLIQPLLGSGSSIYPQ 419
Query: 151 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIA--QSAASNIGPL--GLPSRPGQAICSNY 206
RP Q +C +YM TG CK+G CKFHHP +R A Q A N+ GLP R IC Y
Sbjct: 420 RPGQIECDFYMKTGDCKFGERCKFHHPIDRSAPKQGALHNVKLTLAGLPRREEAIICPYY 479
Query: 207 SMYGICKFGPTCRFDHP 223
G CK+G TC+FDHP
Sbjct: 480 LKTGTCKYGTTCKFDHP 496
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
A+S++LPER PDC Y++ T CK+G+ CKF+HPK+R A LP RP + +
Sbjct: 205 ANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDASSLPERPSEPL 264
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C+ Y G CKFG C+F HP
Sbjct: 265 CAFYVKTGNCKFGINCKFHHP 285
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 32/113 (28%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK----------------------ER 180
+ + +LPERP +P C +Y+ TG CK+G +CKFHHPK ER
Sbjct: 251 SDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSEQTLMVKTEER 310
Query: 181 ----------IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
I+ S A GLP RPG+ C Y G CK+G TCR++HP
Sbjct: 311 AGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCRYNHP 363
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 28/183 (15%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLT---GNASLGSMGSSVLPSSG 57
+R E CP+Y++TGSCK+G C+++HP +++ + P S +M + + S
Sbjct: 336 IRPGEVDCPFYLKTGSCKYGTTCRYNHPDRNAINPSTPAMVHPAMVSTANMNTGFVNPSN 395
Query: 58 LQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGW---NTYMGNIGPLSP 114
Y P RL PL+ S S PG + YM
Sbjct: 396 AIYQAVDP------------RL-----IQPLLGSGSSIYPQRPGQIECDFYMKT----GD 434
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
+ ++ GA +H + + LP R + C YY+ TGTCKYG CKF
Sbjct: 435 CKFGERCKFHHPIDRSAPKQGA-LHNVKLTLAGLPRREEAIICPYYLKTGTCKYGTTCKF 493
Query: 175 HHP 177
HP
Sbjct: 494 DHP 496
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 144 SSQNLP---ERPDQPDCRYYMNTGTCKYGADCKFHHPK----------ERIAQSAASNIG 190
S+ NLP +RP + DC +YM T TCK+G CKF HP + + Q A S
Sbjct: 151 STSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPQIANSE-- 208
Query: 191 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
LP R G C + CKFG C+F+HP
Sbjct: 209 --DLPERLGDPDCPYFLKTQRCKFGSRCKFNHP 239
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 35
R++ CPYY++TG+CK+G CKF HP P + T
Sbjct: 470 REEAIICPYYLKTGTCKYGTTCKFDHPPPGEVMT 503
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R EK C +YM T +CKFG +CKF HP
Sbjct: 161 RPGEKDCAHYMLTRTCKFGDSCKFDHP 187
>gi|147833028|emb|CAN72812.1| hypothetical protein VITISV_004748 [Vitis vinifera]
Length = 1504
Score = 103 bits (258), Expect = 9e-20, Method: Composition-based stats.
Identities = 71/233 (30%), Positives = 101/233 (43%), Gaps = 56/233 (24%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MR E CP+Y++TGSCK+G C+++HP +++ G+A + S P++ L
Sbjct: 503 MRLGEVDCPFYLKTGSCKYGATCRYNHPDRNAINPPAAAIGHAIVAS------PAANLNV 556
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPA--PGWNTYMGNIGPLSPTSIA 118
+V+P I+ P + MG +GP
Sbjct: 557 G---------------------------VVNPVTSILHPIDPRLSQTMG-VGP------- 581
Query: 119 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
IY R G + +H+L S +P D +YM TG CK+G CKFHHP
Sbjct: 582 ---TIYPQR-PGQMECDVCLHLL---SNFIPTDATFMD-EFYMKTGECKFGERCKFHHPI 633
Query: 179 ERIAQSAAS-----NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
+R A +A + G P R G IC Y G CK+G TC+FDHP G
Sbjct: 634 DRSAPTATKLQQNIRLTLAGFPRREGTIICPFYLKTGTCKYGVTCKFDHPPPG 686
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 133 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGP 191
G G + I++A+ + LP+RP +PDC Y+M T CK+G CKF+HPK++ I+ A N
Sbjct: 363 GCGVMVPIVAAN-EFLPQRPGEPDCPYFMKTQKCKFGHKCKFNHPKDQIISLGAPENTDV 421
Query: 192 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
LP RP + C+ Y G CKFG TC+F HP
Sbjct: 422 FVLPERPSELPCAFYVKTGKCKFGATCKFHHP 453
Score = 80.9 bits (198), Expect = 7e-13, Method: Composition-based stats.
Identities = 72/279 (25%), Positives = 100/279 (35%), Gaps = 83/279 (29%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E CPY+M+T CKFG CKF+HP+ + P + + S LP +
Sbjct: 380 RPGEPDCPYFMKTQKCKFGHKCKFNHPKDQIISLGAPENTDVFVLPERPSELPCAFYVKT 439
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
G + T + P + + G N G + T G+
Sbjct: 440 GK-------------CKFGATCKFH----HPKDIQIASTGKNNADGE---QAETGAKGAG 479
Query: 122 LIYSSRNQGDLGAGAQMH-ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
GD+ + L +S+ LP R + DC +Y+ TG+CKYGA C+++HP
Sbjct: 480 ------TTGDVKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYNHPDRN 533
Query: 181 ------------IAQSAASN-------------------------IGPLGLPSRPGQAIC 203
I S A+N +GP P RPGQ C
Sbjct: 534 AINPPAAAIGHAIVASPAANLNVGVVNPVTSILHPIDPRLSQTMGVGPTIYPQRPGQMEC 593
Query: 204 -------SN------------YSMYGICKFGPTCRFDHP 223
SN Y G CKFG C+F HP
Sbjct: 594 DVCLHLLSNFIPTDATFMDEFYMKTGECKFGERCKFHHP 632
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 49/148 (33%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKE-RIAQSAASN------------------ 188
LPERP + C +Y+ TG CK+GA CKFHHPK+ +IA + +N
Sbjct: 424 LPERPSELPCAFYVKTGKCKFGATCKFHHPKDIQIASTGKNNADGEQAETGAKGAGTTGD 483
Query: 189 ------IGPL------GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLP 236
+ P GLP R G+ C Y G CK+G TCR++HP
Sbjct: 484 VKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYNHP------------- 530
Query: 237 PLSILDSSLMNHQAISATHSIETSPDAS 264
D + +N A + H+I SP A+
Sbjct: 531 -----DRNAINPPAAAIGHAIVASPAAN 553
>gi|168000222|ref|XP_001752815.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695978|gb|EDQ82319.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 207
PER QP+C+YYM TG CK+G C++HHPK+R S+ ++ +GLP RPG CS Y+
Sbjct: 4 FPERLGQPECQYYMKTGECKFGTTCRYHHPKDRSTPSSTCHLSAMGLPLRPGNPPCSFYT 63
Query: 208 MYGICKFGPTCRFDH 222
YGICKFGPTC+FDH
Sbjct: 64 RYGICKFGPTCKFDH 78
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSS 32
R + C YYM+TG CKFG C++HHP+ S
Sbjct: 7 RLGQPECQYYMKTGECKFGTTCRYHHPKDRS 37
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
S+ LP RP P C +Y G CK+G CKF H
Sbjct: 46 SAMGLPLRPGNPPCSFYTRYGICKFGPTCKFDH 78
>gi|255575514|ref|XP_002528658.1| conserved hypothetical protein [Ricinus communis]
gi|223531909|gb|EEF33724.1| conserved hypothetical protein [Ricinus communis]
Length = 500
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 98/229 (42%), Gaps = 71/229 (31%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E CP+Y++TGSCK+G C+++HP +++ N ++G
Sbjct: 306 IRPGEVDCPFYLKTGSCKYGATCRYNHPDRNAI--------NPPAAAIGH---------- 347
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
PL+ SP+ N +G+I P + A
Sbjct: 348 --------------------------PLLASPAA--------NLNLGDINPAASIYQA-- 371
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
IY S + LG G ++ P+RP +C YYM TG CK+G C+FHHP +R
Sbjct: 372 --IYPSFSSPMLGVGPTIY---------PQRPGHAECDYYMKTGECKFGERCRFHHPIDR 420
Query: 181 ------IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
AQ A + GLP R G C Y G CK+G TC+FDHP
Sbjct: 421 SAPTATQAQQQAVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 469
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 58/83 (69%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 200
L+A+++ LPERP +PDC Y++ T CKYG+ CKF+HPK+ +A ++ + LP RP +
Sbjct: 172 LAATTEPLPERPGEPDCPYFLKTQRCKYGSKCKFNHPKDELALGSSQSNDVFALPERPSE 231
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
IC+ Y+ G CKFG TC+F HP
Sbjct: 232 PICAFYAKTGRCKFGATCKFHHP 254
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 33/109 (30%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKE----------RIAQSAASNI-------- 189
LPERP +P C +Y TG CK+GA CKFHHPK+ I Q+ A+ +
Sbjct: 225 LPERPSEPICAFYAKTGRCKFGATCKFHHPKDIQIALGQENCNIMQNEAAAMTHGTTGDV 284
Query: 190 ---------------GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
GLP RPG+ C Y G CK+G TCR++HP
Sbjct: 285 NAVKACISFNQALLHNSKGLPIRPGEVDCPFYLKTGSCKYGATCRYNHP 333
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 53/121 (43%), Gaps = 38/121 (31%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER------------IAQSAASN 188
L +S+ LP RP + DC +Y+ TG+CKYGA C+++HP + S A+N
Sbjct: 297 LLHNSKGLPIRPGEVDCPFYLKTGSCKYGATCRYNHPDRNAINPPAAAIGHPLLASPAAN 356
Query: 189 --------------------------IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
+GP P RPG A C Y G CKFG CRF H
Sbjct: 357 LNLGDINPAASIYQAIYPSFSSPMLGVGPTIYPQRPGHAECDYYMKTGECKFGERCRFHH 416
Query: 223 P 223
P
Sbjct: 417 P 417
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
R+ CPYYM+TG+CK+G CKF HP P +
Sbjct: 443 REGAVHCPYYMKTGTCKYGATCKFDHPPPGEV 474
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E CPY+++T CK+G CKF+HP+
Sbjct: 182 RPGEPDCPYFLKTQRCKYGSKCKFNHPK 209
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R EK C +YM T +CKFG +CKF HP
Sbjct: 130 RPGEKDCAHYMLTRTCKFGDSCKFDHP 156
>gi|222618134|gb|EEE54266.1| hypothetical protein OsJ_01160 [Oryza sativa Japonica Group]
Length = 182
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 17/104 (16%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 207
P RP QP+C+YY+ TG+CK+G+ CK+HHP+ + + PLGLP RPG C+ Y+
Sbjct: 12 FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYT 71
Query: 208 MYGICKFGPTCRFDH-----------------PYAGYPINYGLS 234
+G CKFGPTC+FDH P A YP+NY ++
Sbjct: 72 QHGFCKFGPTCKFDHPMGTLSYSPSASSITDLPIAPYPLNYAVA 115
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R + C YY++TGSCKFG ACK+HHPQ
Sbjct: 15 RPGQPECQYYLKTGSCKFGSACKYHHPQ 42
>gi|295913205|gb|ADG57861.1| transcription factor [Lycoris longituba]
Length = 165
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 204
Q PERP QP+C+Y+M TG CK+G CK+HHP E + GLP RPG C
Sbjct: 39 EQTFPERPGQPECQYFMRTGDCKFGPTCKYHHPPEWRTPRTDCVLSSAGLPLRPGVQPCI 98
Query: 205 NYSMYGICKFGPTCRFDHP 223
Y+ +G+CKFGPTC+FDHP
Sbjct: 99 FYAQHGVCKFGPTCKFDHP 117
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R + C Y+MRTG CKFG CK+HHP
Sbjct: 45 RPGQPECQYFMRTGDCKFGPTCKYHHP 71
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
SS LP RP C +Y G CK+G CKF HP
Sbjct: 84 SSAGLPLRPGVQPCIFYAQHGVCKFGPTCKFDHP 117
>gi|357478677|ref|XP_003609624.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510679|gb|AES91821.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 379
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 117/254 (46%), Gaps = 65/254 (25%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPS--SLGTALPLTGNASL-----GSMGSSVL 53
+R EK C YY++TG CKFG CKFHHPQP+ + P+ + L + +V
Sbjct: 136 LRVGEKECSYYVKTGQCKFGATCKFHHPQPAGGQMIAPSPVPQVSPLPMPVPSPIYQTVQ 195
Query: 54 PSSG--LQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIG 110
P SG Q G L + R P L S +QG Y P+++SP+ +VP GW+ Y G
Sbjct: 196 PPSGPSQQQYGVL----VARPPLLHGSFVQGP--YGPMVMSPT--MVPFSGWSPYQAPAG 247
Query: 111 -PLSPTS---IAGSNLIY--------------------------------------SSRN 128
P+ P+S GS +Y S +
Sbjct: 248 SPVLPSSNPLSVGSTQLYGITQLPSPTTAYTQLPSPTTAYTGPYQSSGPSAGPYQSSGPS 307
Query: 129 QGDLGAGAQMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 185
G + S SSQ LPERPDQ +C++YM TG CK+G+ C++HHP + A
Sbjct: 308 AGPYQSSGPSTGPSGSSQKEHSLPERPDQQECQHYMKTGDCKFGSTCRYHHPPDMGAPKV 367
Query: 186 ASNIGPLGLPSRPG 199
N+ P+GLP RPG
Sbjct: 368 --NLSPIGLPLRPG 379
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
R++G + A++ + PER QP C+YY TG+CK+GA CK+HHP++ +
Sbjct: 73 RDRGAVIGAARI------AGEYPERVGQPVCQYYARTGSCKFGASCKYHHPRQAAGTTPP 126
Query: 187 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
++ G P R G+ CS Y G CKFG TC+F HP
Sbjct: 127 VSLNCYGYPLRVGEKECSYYVKTGQCKFGATCKFHHP 163
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
++ P+RPD+ DC YY+ TG C YG+ C+F+HP++R A A+ I P R GQ +C
Sbjct: 41 ESYPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARIA-GEYPERVGQPVCQY 99
Query: 206 YSMYGICKFGPTCRFDHP 223
Y+ G CKFG +C++ HP
Sbjct: 100 YARTGSCKFGASCKYHHP 117
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK----ERIAQSAASNIGPLGLP 195
+S + P R + +C YY+ TG CK+GA CKFHHP+ + IA S + PL +P
Sbjct: 127 VSLNCYGYPLRVGEKECSYYVKTGQCKFGATCKFHHPQPAGGQMIAPSPVPQVSPLPMP 185
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGN 42
R + C YY RTGSCKFG +CK+HHP+ + GT P++ N
Sbjct: 91 RVGQPVCQYYARTGSCKFGASCKYHHPR-QAAGTTPPVSLN 130
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R DE C YY+RTG C +G C+F+HP+
Sbjct: 46 RPDEADCIYYLRTGFCGYGSRCRFNHPR 73
>gi|357135532|ref|XP_003569363.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like
[Brachypodium distachyon]
Length = 479
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 95/232 (40%), Gaps = 72/232 (31%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E C +Y++TGSC +G C+F+HP+ PL + +G S+LP+S +
Sbjct: 278 IRPGEVDCSFYIKTGSCMYGSTCRFNHPERHHPVLDFPL-----VAPLGQSILPTSSV-- 330
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
+P L RA P ++ + ++ P+ P IA
Sbjct: 331 ---VPVEMLNRATNF-----------------------LPNFDFHATHV-PIEPEPIA-- 361
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
P+RP + C +YM TG CK+ CKFHHP +R
Sbjct: 362 ---------------------------YPQRPGETVCDFYMKTGFCKFSEKCKFHHPVDR 394
Query: 181 IAQSAASNIGP---------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
A + ++ P GLP R +CS Y G CKFG C+FDHP
Sbjct: 395 SASAPVASTEPRQKSVTLTLAGLPRREDAEVCSFYMKTGTCKFGVQCKFDHP 446
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 63/263 (23%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E CP++M+T C F CKF+HP+ + + TGN SS+ P ++ +
Sbjct: 151 RPGEPDCPFFMKTRRCGFASKCKFNHPK-EKVNVTVAGTGNKGSQISESSISP---VKPS 206
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGI-VPAPGWNTYMGNIGPLSPTSIAGS 120
P + + + GT S ++ I VP+ G + + +IA S
Sbjct: 207 EPCPFFPKGKCKF------GTNCKF----SHAKDIEVPSSGHESKSTATVEAAGHNIAAS 256
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
+ + + + L AQ H +S+ +P RP + DC +Y+ TG+C YG+ C+F+HP+
Sbjct: 257 DSVSAKK----LTPVAQEH----NSKGMPIRPGEVDCSFYIKTGSCMYGSTCRFNHPERH 308
Query: 181 -----------IAQSA--------------ASNI---------------GPLGLPSRPGQ 200
+ QS A+N P+ P RPG+
Sbjct: 309 HPVLDFPLVAPLGQSILPTSSVVPVEMLNRATNFLPNFDFHATHVPIEPEPIAYPQRPGE 368
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
+C Y G CKF C+F HP
Sbjct: 369 TVCDFYMKTGFCKFSEKCKFHHP 391
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 17/89 (19%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-----------AQSAASNIGPLG 193
++ PERP +PDC ++M T C + + CKF+HPKE++ +Q + S+I P+
Sbjct: 145 EESYPERPGEPDCPFFMKTRRCGFASKCKFNHPKEKVNVTVAGTGNKGSQISESSISPVK 204
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDH 222
PS P C + G CKFG C+F H
Sbjct: 205 -PSEP----CPFFPK-GKCKFGTNCKFSH 227
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 40/179 (22%)
Query: 133 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE------------- 179
G G + +S SS + P +P +P C ++ G CK+G +CKF H K+
Sbjct: 187 GTGNKGSQISESSIS-PVKPSEP-CPFFPK-GKCKFGTNCKFSHAKDIEVPSSGHESKST 243
Query: 180 --------RIAQS---AASNIGPL-------GLPSRPGQAICSNYSMYGICKFGPTCRFD 221
IA S +A + P+ G+P RPG+ CS Y G C +G TCRF+
Sbjct: 244 ATVEAAGHNIAASDSVSAKKLTPVAQEHNSKGMPIRPGEVDCSFYIKTGSCMYGSTCRFN 303
Query: 222 HPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQ 280
HP +P+ L P ++ L S++ S+ +E A++ +PN+ ++ V ++
Sbjct: 304 HPERHHPV---LDFPLVAPLGQSIL---PTSSVVPVEMLNRATNFLPNFDFHATHVPIE 356
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL-----GLPSRPGQAIC 203
P+RP + DC +YM T TC YG CKF HP + + + N P RPG+ C
Sbjct: 99 PQRPGEKDCAFYMRTRTCMYGEGCKFDHP-QWVPEGGIPNWKEAPKDEESYPERPGEPDC 157
Query: 204 SNYSMYGICKFGPTCRFDHP 223
+ C F C+F+HP
Sbjct: 158 PFFMKTRRCGFASKCKFNHP 177
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 44
R+D + C +YM+TG+CKFGV CKF HP P + G A
Sbjct: 420 REDAEVCSFYMKTGTCKFGVQCKFDHPPPEEAIAKVSKQGAAE 462
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R EK C +YMRT +C +G CKF HPQ
Sbjct: 101 RPGEKDCAFYMRTRTCMYGEGCKFDHPQ 128
>gi|47499870|gb|AAT28673.1| zinc finger protein [Oryza sativa Japonica Group]
gi|47559177|gb|AAT35591.1| zinc-finger transcription factor [Oryza sativa Japonica Group]
Length = 207
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 207
PERP QPDC+YYM TG CK+GA CK+HHP+E A + + L LP RPG C+ Y+
Sbjct: 35 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 94
Query: 208 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 241
G C++G C++DHP + Y S PLS +
Sbjct: 95 QNGYCRYGVACKYDHPMGT--LGYSPSALPLSDM 126
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R + C YYMRTG CKFG CK+HHP+
Sbjct: 38 RPGQPDCQYYMRTGDCKFGATCKYHHPR 65
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG---TALPLT 40
+R + C YY + G C++GVACK+ HP +LG +ALPL+
Sbjct: 83 LRPGAQPCAYYAQNGYCRYGVACKYDHPM-GTLGYSPSALPLS 124
>gi|224101283|ref|XP_002312214.1| predicted protein [Populus trichocarpa]
gi|222852034|gb|EEE89581.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
A+S+ P+RP PDC Y++ T CKYG +CKF+HPKE+++ + N LP RP +
Sbjct: 198 ATSETFPDRPGVPDCPYFLKTQRCKYGLNCKFNHPKEKMSLGVSENTSISALPERPSEPP 257
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C+ Y GICKFG TC+F HP
Sbjct: 258 CAFYMKTGICKFGATCKFHHP 278
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 54/110 (49%), Gaps = 34/110 (30%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKE-RIAQSAASN------------------ 188
LPERP +P C +YM TG CK+GA CKFHHPK+ +I+ + N
Sbjct: 249 LPERPSEPPCAFYMKTGICKFGATCKFHHPKDIQISLAGQGNDDGVQTNSVVDNGGITGD 308
Query: 189 ---IGPL------------GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
I L GLP RPG+ C Y G CK+G TCR++HP
Sbjct: 309 VNVIKALVSVTPALLHNSKGLPMRPGEVDCPFYLKTGSCKYGATCRYNHP 358
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 96/232 (41%), Gaps = 53/232 (22%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E C +YM+TG CKFG CKFHHP+ + +L GN G +SV+ + G+
Sbjct: 252 RPSEPPCAFYMKTGICKFGATCKFHHPK--DIQISLAGQGNDD-GVQTNSVVDNGGI--T 306
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPG-------------------- 101
G + + ++ S P ++ S+G+ PG
Sbjct: 307 GDV------------NVIKALVSVTPALLHNSKGLPMRPGEVDCPFYLKTGSCKYGATCR 354
Query: 102 --------WNTYMGNIG-PLSPTSIAGSNL-IYSSRNQGDLGAGAQMHILSASSQNLPER 151
N IG P+ S+A NL ++S ++ L P+R
Sbjct: 355 YNHPERTAINPPAAAIGHPIIAPSMANLNLGVFSPAASIYQTIDPRLSTLGVGPTVYPQR 414
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS------NIGPLGLPSR 197
P Q +C +YM TG CK+G CKFHHP +R A +A + GLP R
Sbjct: 415 PGQAECDFYMKTGECKFGETCKFHHPIDRSAPTAKQTEPQTVKLTLAGLPRR 466
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 56/119 (47%), Gaps = 36/119 (30%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-------------IAQSAAS 187
L +S+ LP RP + DC +Y+ TG+CKYGA C+++HP+ IA S A+
Sbjct: 322 LLHNSKGLPMRPGEVDCPFYLKTGSCKYGATCRYNHPERTAINPPAAAIGHPIIAPSMAN 381
Query: 188 -----------------------NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+GP P RPGQA C Y G CKFG TC+F HP
Sbjct: 382 LNLGVFSPAASIYQTIDPRLSTLGVGPTVYPQRPGQAECDFYMKTGECKFGETCKFHHP 440
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
MR E CP+Y++TGSCK+G C+++HP+ +++
Sbjct: 331 MRPGEVDCPFYLKTGSCKYGATCRYNHPERTAI 363
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 18/27 (66%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R EK C YYM T +CKFG CKF HP
Sbjct: 154 RPGEKDCAYYMLTRTCKFGDTCKFDHP 180
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPS-SLGTA 36
CPY+++T CK+G+ CKF+HP+ SLG +
Sbjct: 212 CPYFLKTQRCKYGLNCKFNHPKEKMSLGVS 241
>gi|218187915|gb|EEC70342.1| hypothetical protein OsI_01241 [Oryza sativa Indica Group]
Length = 385
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 110/255 (43%), Gaps = 72/255 (28%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLP---SSG 57
+R EK C YY++TG CKFG CKFHHP+ + G + +M V P SS
Sbjct: 115 LRSGEKDCTYYVKTGHCKFGSTCKFHHPE---------IGGVSETPNMYPPVQPQPISSS 165
Query: 58 LQYAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 116
Y L W + R P L S L G SY P+++ PS +VP GWN Y+ + ++ S
Sbjct: 166 HPYQ-HLAGWQMGRPPVLPGSFLSG--SYPPMML-PST-VVPMQGWNPYISPVNQVA--S 218
Query: 117 IAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
G + + R G + L A Y+NT
Sbjct: 219 AGGHQTVQAGRFMAYRTKGLLLQSLMA----------------YLNT------------- 249
Query: 177 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH-------------- 222
PK S PLGLP RPG C+ Y+ +G CKFGPTC+FDH
Sbjct: 250 PKSNCMLS------PLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPMGTLSYSPSASSI 303
Query: 223 ---PYAGYPINYGLS 234
P A YP+NY ++
Sbjct: 304 TDLPIAPYPLNYAVA 318
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG----LPSR 197
+ ++ LPERP + DC YY+ TG C YG +C+++HP++R A + + G P R
Sbjct: 13 AVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPER 72
Query: 198 PGQAICSNYSMYGICKFGPTCRFDHPYAG 226
PGQ +C Y G CKFG C++DHP G
Sbjct: 73 PGQPVCEYYMKNGTCKFGSNCKYDHPREG 101
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 204
S PERP QP C YYM GTCK+G++CK+ HP+E Q+ N G P R G+ C+
Sbjct: 66 SAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQAVMLNSS--GYPLRSGEKDCT 123
Query: 205 NYSMYGICKFGPTCRFDHPYAG 226
Y G CKFG TC+F HP G
Sbjct: 124 YYVKTGHCKFGSTCKFHHPEIG 145
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 98/239 (41%), Gaps = 58/239 (24%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL------PL------------TGNA 43
R + C YYM+ G+CKFG CK+ HP+ S+ + PL TG+
Sbjct: 72 RPGQPVCEYYMKNGTCKFGSNCKYDHPREGSVQAVMLNSSGYPLRSGEKDCTYYVKTGHC 131
Query: 44 SLGSM---------GSSVLP-----------SSGLQYAGSLPTWSLQRAPYL-SSRLQGT 82
GS G S P SS Y L W + R P L S L G
Sbjct: 132 KFGSTCKFHHPEIGGVSETPNMYPPVQPQPISSSHPYQ-HLAGWQMGRPPVLPGSFLSG- 189
Query: 83 QSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILS 142
SY P+++ PS +VP GWN Y+ + ++ S G + + R G + L
Sbjct: 190 -SYPPMML-PST-VVPMQGWNPYISPVNQVA--SAGGHQTVQAGRFMAYRTKGLLLQSLM 244
Query: 143 A-----------SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS-AASNI 189
A S LP RP C YY G CK+G CKF HP ++ S +AS+I
Sbjct: 245 AYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPMGTLSYSPSASSI 303
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 67/177 (37%), Gaps = 55/177 (31%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E C YY+RTG+C +G C+++HP+ + L N + S+ P
Sbjct: 22 RPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVL----NGGGKTTHSAEYPE------ 71
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
P Q P YM N T GSN
Sbjct: 72 -----------------------------RPGQ-----PVCEYYMKNG-----TCKFGSN 92
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
Y +G + A + +S P R + DC YY+ TG CK+G+ CKFHHP+
Sbjct: 93 CKYDHPREGSVQA------VMLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPE 143
>gi|11994409|dbj|BAB02411.1| zinc finger protein-like [Arabidopsis thaliana]
Length = 326
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 112/276 (40%), Gaps = 53/276 (19%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E C +YM+TG CKFG++CKFHHP+ LP + S+G + P A
Sbjct: 85 RPSEPMCTFYMKTGKCKFGLSCKFHHPK----DIQLPSSSQDIGSSVGLTSEPD-----A 135
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAP-----GWNTYMGNIGPLSPTS 116
+ P + A Y +S+ +S QG V P G Y P
Sbjct: 136 TNNPHVTFTPALYHNSKGLPVRSLF-------QGEVDCPFYLKTGSCKYGATCRYNHPER 188
Query: 117 IA------GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 170
A G N S N +L G L + + + QP YYM TG CK+G
Sbjct: 189 TAFIPQAAGVNYSLVSSNTANLNLG-----LVTPATSFYQTLTQPT--YYMKTGECKFGE 241
Query: 171 DCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
CKFHHP +R++ Q + G P R G C Y G CK+G TC+FDHP
Sbjct: 242 RCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHP 301
Query: 224 YAGYPINYGLSLPPLSILDSSLMNHQAISATHSIET 259
PP ++ + A AT++ T
Sbjct: 302 ------------PPGEVMAKTTSEADAAGATNTDTT 325
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 204
++ PERP +PDC YY+ T CKYG+ CKF+HP+E A S + LP RP + +C+
Sbjct: 36 NEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD---SLPERPSEPMCT 92
Query: 205 NYSMYGICKFGPTCRFDHP 223
Y G CKFG +C+F HP
Sbjct: 93 FYMKTGKCKFGLSCKFHHP 111
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 94/242 (38%), Gaps = 86/242 (35%)
Query: 12 MRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSLPTWSLQR 71
M+T +CKFG +C+F HP +P G +P W +
Sbjct: 1 MQTRTCKFGESCRFDHP------IWVP----------------------EGGIPDW--KE 30
Query: 72 APYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGD 131
AP V P++ PG P P I Y S+ +
Sbjct: 31 AP----------------VVPNEEYPERPG--------EPDCPYYIKTQRCKYGSKCK-- 64
Query: 132 LGAGAQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 190
+ +S +Q+ LPERP +P C +YM TG CK+G CKFHHPK+ S++ +IG
Sbjct: 65 FNHPREEAAVSVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIG 124
Query: 191 -PLGLPSRP----------------------------GQAICSNYSMYGICKFGPTCRFD 221
+GL S P G+ C Y G CK+G TCR++
Sbjct: 125 SSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSLFQGEVDCPFYLKTGSCKYGATCRYN 184
Query: 222 HP 223
HP
Sbjct: 185 HP 186
>gi|42571795|ref|NP_973988.1| zinc finger CCCH domain-containing protein 13 [Arabidopsis
thaliana]
gi|122215429|sp|Q3ECU8.1|C3H13_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 13;
Short=AtC3H13
gi|332194141|gb|AEE32262.1| zinc finger CCCH domain-containing protein 13 [Arabidopsis
thaliana]
Length = 82
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 203
S + PERP +P+C YY+ TG C +CK+HHPK + GLP RPGQAIC
Sbjct: 2 SEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAIC 61
Query: 204 SNYSMYGICKFGPTCRFDH 222
+YS +GIC+ GPTC+FDH
Sbjct: 62 PHYSRFGICRSGPTCKFDH 80
>gi|326521656|dbj|BAK00404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1431
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 92/233 (39%), Gaps = 67/233 (28%)
Query: 4 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGS 63
+E CP+YM+ G CKFG CKF+HP+ ++ P +A + PS+ +
Sbjct: 1178 EEPECPFYMKRGFCKFGAQCKFYHPEDANPTMQSPT--DAKISVTMDEHHPSTRITPEDH 1235
Query: 64 LPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLI 123
+P Q+ Y R T + PS I P + P P
Sbjct: 1236 VP----QQPQYPERRSVTTDDH-----HPSTRITP---------EVLPQQP--------- 1268
Query: 124 YSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 183
PERP QPDCRYYM G CKY + C FHHPK+R+A
Sbjct: 1269 -----------------------QYPERPGQPDCRYYMQFGKCKYLSACIFHHPKDRLAA 1305
Query: 184 -------SAASNIGPL--GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 227
+ + IGP G+P C Y G C+FG C F HP Y
Sbjct: 1306 MWSPSDPAHSDQIGPKIHGMPD------CPFYMKSGKCQFGSLCEFRHPKDIY 1352
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
N PERP +PDC +YM G CK+ + C +HHPK++ P GLP P C Y
Sbjct: 1138 NYPERPGRPDCPFYMRFGDCKFASACNYHHPKDKY---------PTGLPEEPE---CPFY 1185
Query: 207 SMYGICKFGPTCRFDHPYAGYP 228
G CKFG C+F HP P
Sbjct: 1186 MKRGFCKFGAQCKFYHPEDANP 1207
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
+ PERP + +C ++ G CK+ + CK+HHPK+ + + + P RPG+ C Y
Sbjct: 1098 DYPERPGRQECPFFARYGDCKFASACKYHHPKQ------SKDKEQVNYPERPGRPDCPFY 1151
Query: 207 SMYGICKFGPTCRFDHPYAGYP 228
+G CKF C + HP YP
Sbjct: 1152 MRFGDCKFASACNYHHPKDKYP 1173
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH-------------PKERIAQSAAS-- 187
A ++ P++P + +C YM+ GTC YG C F+H P ER AA
Sbjct: 837 APARRYPQKPRKLNCPSYMSKGTCTYGPSCHFNHPPQFNAKTNDSWRPSERRDHGAAEIL 896
Query: 188 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLM- 246
+ LGLP R G C Y G C++G C F+HP + I+ S P D++L
Sbjct: 897 ELNRLGLPIREGARNCDYYMRTGACRYGKNCHFNHP--DHVIDARFS-SPTGWEDNALET 953
Query: 247 ----NHQAISATHSIETSPDAS-SKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSSKV 300
+H A+H + S DA+ + + ++SD V++ ++ K+S DD S +
Sbjct: 954 EKSSDHALTEASHMKKASDDATLNDRSHLKKSSDGVTLDDRSHLNKSSDNATLDDRSHL 1012
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 32/178 (17%)
Query: 7 SCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSLPT 66
C YYM+ G CK+ AC FHHP+ L +M S P+ Q +
Sbjct: 1278 DCRYYMQFGKCKYLSACIFHHPKDR-------------LAAMWSPSDPAHSDQIGPKI-- 1322
Query: 67 WSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSS 126
+ P+ +S S + P ++T G + GS Y S
Sbjct: 1323 HGMPDCPFY------MKSGKCQFGSLCEFRHPKDIYSTTEEAFGERT-----GSG-AYDS 1370
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 184
+ D G Q S PERP +P+C +YM G CK+ +CK+HHP +R+++
Sbjct: 1371 LTRSDNGVEQQ-----EGSVMYPERPGEPECAHYMRQGYCKFQMNCKYHHPGDRLSKK 1423
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 114 PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCK 173
P A +N + + D GA IL + LP R +C YYM TG C+YG +C
Sbjct: 872 PQFNAKTNDSWRPSERRDHGAAE---ILELNRLGLPIREGARNCDYYMRTGACRYGKNCH 928
Query: 174 FHHPKERIAQSAASNIG 190
F+HP I +S G
Sbjct: 929 FNHPDHVIDARFSSPTG 945
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 17/23 (73%)
Query: 7 SCPYYMRTGSCKFGVACKFHHPQ 29
CP+YMR G CKF AC +HHP+
Sbjct: 1147 DCPFYMRFGDCKFASACNYHHPK 1169
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R+ ++C YYMRTG+C++G C F+HP
Sbjct: 905 IREGARNCDYYMRTGACRYGKNCHFNHP 932
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 6 KSCPYYMRTGSCKFGVACKFHHPQPSS 32
+ CP++ R G CKF ACK+HHP+ S
Sbjct: 1106 QECPFFARYGDCKFASACKYHHPKQSK 1132
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHP 28
E C +YMR G CKF + CK+HHP
Sbjct: 1393 EPECAHYMRQGYCKFQMNCKYHHP 1416
>gi|414876870|tpg|DAA54001.1| TPA: hypothetical protein ZEAMMB73_676626 [Zea mays]
Length = 269
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSA 185
R + G GA+ + ++Q PER QP C YY+ TGTCK+G++CK+HHPK+ QS
Sbjct: 90 RGGTEFGGGAK----NGAAQYFPERQGQPVCEYYLKTGTCKFGSNCKYHHPKQDGSVQSV 145
Query: 186 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPI 229
N G P RPG+ CS Y G CKFG TC+F HP + G P+
Sbjct: 146 ILNNN--GFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGIPV 188
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAICS 204
LPERP + DC YY+ TG C +G C+++HP++R A N P R GQ +C
Sbjct: 58 LPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQYFPERQGQPVCE 117
Query: 205 NYSMYGICKFGPTCRFDHP 223
Y G CKFG C++ HP
Sbjct: 118 YYLKTGTCKFGSNCKYHHP 136
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
+R EK C YYM+TG CKFG CKFHHP+
Sbjct: 154 LRPGEKECSYYMKTGQCKFGSTCKFHHPE 182
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
RQ + C YY++TG+CKFG CK+HHP+
Sbjct: 110 RQGQPVCEYYLKTGTCKFGSNCKYHHPK 137
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E C YY+RTG+C FG C+++HP+
Sbjct: 61 RPGEADCGYYLRTGACGFGERCRYNHPR 88
>gi|218188663|gb|EEC71090.1| hypothetical protein OsI_02867 [Oryza sativa Indica Group]
Length = 463
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 110/258 (42%), Gaps = 56/258 (21%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
+Q E CP++M+TG CKFG CKF+HP+ A T + L + SS+LP
Sbjct: 157 QQGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGKTNDKHLIA-DSSILPVR----- 210
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
P+ L + + + M P +P+ P S ++ G
Sbjct: 211 ---PSEPL--CSFYAKTGKCKFRAMCKFNHPKDIEIPS-------SQNEPESAVTVEGET 258
Query: 122 LIYSSRNQGDLGAGAQMHILSA---SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
I S+ + + A Q + +A +S+ LP RP + DC +YM G+CK+G+ C+F+HP
Sbjct: 259 DIGSAAD--SVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPD 316
Query: 179 ------------------ERIAQSAASNI---------------GPLGLPSRPGQAICSN 205
E + ++++N GP+ P RPG +C
Sbjct: 317 RLVLNFPLPLGQTILPTPESMLLNSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCDF 376
Query: 206 YSMYGICKFGPTCRFDHP 223
Y G CKF C+F HP
Sbjct: 377 YMKTGFCKFADRCKFHHP 394
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 110/262 (41%), Gaps = 60/262 (22%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSSLG---TALPLTGNASLGSMGSSV- 52
+R E C +Y +TG CKF CKF+HP+ PSS +A+ + G +GS SV
Sbjct: 209 VRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVS 268
Query: 53 ----LPSSGLQYAGS--LPTWSLQ-RAPYL----SSRLQGTQSY---------MPLIVSP 92
P + Q S LP + P+ S + T + PL +
Sbjct: 269 AKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLG- 327
Query: 93 SQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN--QGDLGAGAQMHILSASSQNLPE 150
Q I+P P S L+ SS N QG A M + P+
Sbjct: 328 -QTILPTPE------------------SMLLNSSANFMQGFDFHAAHMPV-GPGPVTYPQ 367
Query: 151 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP---------LGLPSRPGQA 201
RP C +YM TG CK+ CKFHHP +R A ++N P GLP R
Sbjct: 368 RPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAV 427
Query: 202 ICSNYSMYGICKFGPTCRFDHP 223
+C+ Y G+CKFG C+FDHP
Sbjct: 428 VCAFYMKTGVCKFGMQCKFDHP 449
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-------LPSR 197
++ PE+ +PDC ++M TG CK+G+ CKF+HPKE++ A+ LP R
Sbjct: 151 EESYPEQQGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGKTNDKHLIADSSILPVR 210
Query: 198 PGQAICSNYSMYGICKFGPTCRFDHP 223
P + +CS Y+ G CKF C+F+HP
Sbjct: 211 PSEPLCSFYAKTGKCKFRAMCKFNHP 236
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 38/146 (26%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE--------------------- 179
L A S LP RP +P C +Y TG CK+ A CKF+HPK+
Sbjct: 200 LIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETD 259
Query: 180 ------------RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---Y 224
+ +AA GLP RPG+ C Y G CKFG TCRF+HP
Sbjct: 260 IGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLV 319
Query: 225 AGYPINYGLSLPPLSILDSSLMNHQA 250
+P+ G ++ P +S L+N A
Sbjct: 320 LNFPLPLGQTILPTP--ESMLLNSSA 343
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 74/194 (38%), Gaps = 23/194 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MR E CP+YM+ GSCKFG C+F+HP L LPL G ++LP+
Sbjct: 288 MRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPL---------GQTILPTPE--- 335
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
+ L + ++MP V P P T A
Sbjct: 336 -----SMLLNSSANFMQGFDFHAAHMP--VGPGPVTYPQRPGATVCDFYMKTGFCKFADR 388
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQ----NLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
+ ++ A S Q LP R D C +YM TG CK+G CKF H
Sbjct: 389 CKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDH 448
Query: 177 PKERIAQSAASNIG 190
P + A + SN G
Sbjct: 449 PPPQEAIAKVSNSG 462
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA-----QSAASNIGPLGLP 195
L +S P+RP + DC +YM T TCK+G CKF HP+ A+N+ P
Sbjct: 97 LESSLPIYPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEAANVEE-SYP 155
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ G+ C + G CKFG C+F+HP
Sbjct: 156 EQQGEPDCPFFMKTGKCKFGSKCKFNHP 183
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R EK C +YM T +CKFG +CKF HPQ
Sbjct: 107 RPGEKDCAFYMMTRTCKFGGSCKFDHPQ 134
>gi|449531215|ref|XP_004172583.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like,
partial [Cucumis sativus]
Length = 205
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 64/102 (62%), Gaps = 8/102 (7%)
Query: 137 QMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLG 193
++ I +A + PER QP+C+YY+ TGTCK+GA CKFHHP+++ IA A NI LG
Sbjct: 47 ELAIATARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNI--LG 104
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSL 235
P RP + C+ Y G CKFG TC+F HP P N +SL
Sbjct: 105 YPLRPSETECAYYLRTGQCKFGNTCKFHHP---QPTNMMVSL 143
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 131 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNI 189
+LG+G M S + P RP +PDC YY+ TG C++GA C+F+HP R +A + A
Sbjct: 2 NLGSGEIM-----GSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIATARMK 56
Query: 190 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFG TC+F HP
Sbjct: 57 GE--FPERIGQPECQYYLKTGTCKFGATCKFHHP 88
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 11/107 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ- 59
+R E C YY+RTG CKFG CKFHHPQP+++ + L G+ ++ S P+ G Q
Sbjct: 107 LRPSETECAYYLRTGQCKFGNTCKFHHPQPTNM--MVSLRGSPIYPTVQS---PTPGQQS 161
Query: 60 YAGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTY 105
Y G WS RA ++ S R QG SY LI+ QG++ PGWN +
Sbjct: 162 YPGGSTNWS--RASFIPSPRWQGPSSYASLIL--PQGVLSVPGWNAF 204
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
+R E C YY+RTG C+FG C+F+HP L A
Sbjct: 16 VRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIA 51
>gi|297847070|ref|XP_002891416.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337258|gb|EFH67675.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 82
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 203
S N PERP +P+C YY+ TG C +CK+HHPK + + GLP RP QAIC
Sbjct: 2 SDGNFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPREPPCPLNDKGLPLRPDQAIC 61
Query: 204 SNYSMYGICKFGPTCRFDH 222
+YS +GICK GPTC+FDH
Sbjct: 62 PHYSRFGICKSGPTCKFDH 80
>gi|115438594|ref|NP_001043577.1| Os01g0616400 [Oryza sativa Japonica Group]
gi|54290411|dbj|BAD61281.1| zinc finger protein 3-like [Oryza sativa Japonica Group]
gi|113533108|dbj|BAF05491.1| Os01g0616400 [Oryza sativa Japonica Group]
gi|215767326|dbj|BAG99554.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618856|gb|EEE54988.1| hypothetical protein OsJ_02611 [Oryza sativa Japonica Group]
Length = 461
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 110/262 (41%), Gaps = 60/262 (22%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSSLG---TALPLTGNASLGSMGSSV- 52
+R E C +Y +TG CKF CKF+HP+ PSS +A+ + G +GS SV
Sbjct: 207 VRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVS 266
Query: 53 ----LPSSGLQYAGS--LPTWSLQ-RAPYL----SSRLQGTQSY---------MPLIVSP 92
P + Q S LP + P+ S + T + PL +
Sbjct: 267 AKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLG- 325
Query: 93 SQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN--QGDLGAGAQMHILSASSQNLPE 150
Q I+P P S L+ SS N QG A M + P+
Sbjct: 326 -QTILPTPE------------------SMLLNSSANFMQGFDFHAAHMPV-GPGPVTYPQ 365
Query: 151 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP---------LGLPSRPGQA 201
RP C +YM TG CK+ CKFHHP +R A ++N P GLP R
Sbjct: 366 RPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAV 425
Query: 202 ICSNYSMYGICKFGPTCRFDHP 223
+C+ Y G+CKFG C+FDHP
Sbjct: 426 VCAFYMKTGVCKFGMQCKFDHP 447
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 56/258 (21%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
++ E CP++M+TG CKFG CKF+HP+ A T + L + SS+LP
Sbjct: 155 QEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIA-DSSILPVR----- 208
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
P+ L + + + M P +P+ P S ++ G
Sbjct: 209 ---PSEPL--CSFYAKTGKCKFRAMCKFNHPKDIEIPS-------SQNEPESAVTVEGET 256
Query: 122 LIYSSRNQGDLGAGAQMHILSA---SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
I S+ + + A Q + +A +S+ LP RP + DC +YM G+CK+G+ C+F+HP
Sbjct: 257 DIGSAAD--SVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPD 314
Query: 179 ------------------ERIAQSAASNI---------------GPLGLPSRPGQAICSN 205
E + ++++N GP+ P RPG +C
Sbjct: 315 RLVLNFPLPLGQTILPTPESMLLNSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCDF 374
Query: 206 YSMYGICKFGPTCRFDHP 223
Y G CKF C+F HP
Sbjct: 375 YMKTGFCKFADRCKFHHP 392
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-------LPSR 197
++ PE+ +PDC ++M TG CK+G+ CKF+HPKE++ A+ N LP R
Sbjct: 149 EESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVR 208
Query: 198 PGQAICSNYSMYGICKFGPTCRFDHP 223
P + +CS Y+ G CKF C+F+HP
Sbjct: 209 PSEPLCSFYAKTGKCKFRAMCKFNHP 234
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 38/146 (26%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE--------------------- 179
L A S LP RP +P C +Y TG CK+ A CKF+HPK+
Sbjct: 198 LIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETD 257
Query: 180 ------------RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---Y 224
+ +AA GLP RPG+ C Y G CKFG TCRF+HP
Sbjct: 258 IGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLV 317
Query: 225 AGYPINYGLSLPPLSILDSSLMNHQA 250
+P+ G ++ P +S L+N A
Sbjct: 318 LNFPLPLGQTILPTP--ESMLLNSSA 341
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 74/194 (38%), Gaps = 23/194 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MR E CP+YM+ GSCKFG C+F+HP L LPL G ++LP+
Sbjct: 286 MRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPL---------GQTILPTPE--- 333
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
+ L + ++MP V P P T A
Sbjct: 334 -----SMLLNSSANFMQGFDFHAAHMP--VGPGPVTYPQRPGATVCDFYMKTGFCKFADR 386
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQ----NLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
+ ++ A S Q LP R D C +YM TG CK+G CKF H
Sbjct: 387 CKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDH 446
Query: 177 PKERIAQSAASNIG 190
P + A + SN G
Sbjct: 447 PPPQEAIAKVSNSG 460
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA-----QSAASNIGPLGLP 195
L +S P+RP + DC +YM T TCK+G CKF HP+ A+N+ P
Sbjct: 95 LESSLPIYPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEAANVEE-SYP 153
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ G+ C + G CKFG C+F+HP
Sbjct: 154 EQEGEPDCPFFMKTGKCKFGSKCKFNHP 181
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R EK C +YM T +CKFG +CKF HPQ
Sbjct: 105 RPGEKDCAFYMMTRTCKFGGSCKFDHPQ 132
>gi|205688147|sp|Q5ZDJ6.2|C3H8_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 8;
Short=OsC3H8
gi|54290410|dbj|BAD61280.1| zinc finger protein 3-like [Oryza sativa Japonica Group]
gi|215767138|dbj|BAG99366.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 462
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 110/262 (41%), Gaps = 60/262 (22%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSSLG---TALPLTGNASLGSMGSSV- 52
+R E C +Y +TG CKF CKF+HP+ PSS +A+ + G +GS SV
Sbjct: 208 VRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVS 267
Query: 53 ----LPSSGLQYAGS--LPTWSLQ-RAPYL----SSRLQGTQSY---------MPLIVSP 92
P + Q S LP + P+ S + T + PL +
Sbjct: 268 AKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLG- 326
Query: 93 SQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN--QGDLGAGAQMHILSASSQNLPE 150
Q I+P P S L+ SS N QG A M + P+
Sbjct: 327 -QTILPTPE------------------SMLLNSSANFMQGFDFHAAHMPV-GPGPVTYPQ 366
Query: 151 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP---------LGLPSRPGQA 201
RP C +YM TG CK+ CKFHHP +R A ++N P GLP R
Sbjct: 367 RPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAV 426
Query: 202 ICSNYSMYGICKFGPTCRFDHP 223
+C+ Y G+CKFG C+FDHP
Sbjct: 427 VCAFYMKTGVCKFGMQCKFDHP 448
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 106/285 (37%), Gaps = 83/285 (29%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R EK C +YM T +CKFG +CKF HPQ +P G+
Sbjct: 105 RPGEKDCAFYMMTRTCKFGGSCKFDHPQ----------------------WVPEGGI--- 139
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
P W Q A +SY P Q P + G S N
Sbjct: 140 ---PNWKEQAA-------NVEESY------PEQEGEPD---CPFFMKTGKCKFGSKCKFN 180
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE-- 179
N G H++ A S LP RP +P C +Y TG CK+ A CKF+HPK+
Sbjct: 181 HPKEKVNALASGNTNDKHLI-ADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIE 239
Query: 180 -------------------------------RIAQSAASNIGPLGLPSRPGQAICSNYSM 208
+ +AA GLP RPG+ C Y
Sbjct: 240 IPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMK 299
Query: 209 YGICKFGPTCRFDHP---YAGYPINYGLSLPPLSILDSSLMNHQA 250
G CKFG TCRF+HP +P+ G ++ P +S L+N A
Sbjct: 300 MGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTP--ESMLLNSSA 342
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 74/194 (38%), Gaps = 23/194 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
MR E CP+YM+ GSCKFG C+F+HP L LPL G ++LP+
Sbjct: 287 MRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPL---------GQTILPTPE--- 334
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
+ L + ++MP V P P T A
Sbjct: 335 -----SMLLNSSANFMQGFDFHAAHMP--VGPGPVTYPQRPGATVCDFYMKTGFCKFADR 387
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQ----NLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
+ ++ A S Q LP R D C +YM TG CK+G CKF H
Sbjct: 388 CKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDH 447
Query: 177 PKERIAQSAASNIG 190
P + A + SN G
Sbjct: 448 PPPQEAIAKVSNSG 461
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 17/94 (18%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP-----------KERIAQSAASNI 189
L +S P+RP + DC +YM T TCK+G CKF HP KE+ A S
Sbjct: 95 LESSLPIYPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEES-- 152
Query: 190 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P + G+ C + G CKFG C+F+HP
Sbjct: 153 ----YPEQEGEPDCPFFMKTGKCKFGSKCKFNHP 182
>gi|413916353|gb|AFW56285.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 287
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Query: 12 MRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSSGLQYAGSLPTW 67
MRTGSCKF CKFHHP P++ + P G+ L ++ S PS LQ
Sbjct: 1 MRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPS--LQMWPDQRAL 58
Query: 68 SLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSS 126
+ Q P+L+ SY +V P QG+ P+ W+ Y + P P + + +
Sbjct: 59 NEQHVPFLAP----APSYSGGMVPP-QGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAH 113
Query: 127 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
N A S PERP QP+C++++ +G CKY C++HHP+ R +
Sbjct: 114 MNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPP 173
Query: 187 SNIGPLGLPSRP 198
+ + P+GLP +P
Sbjct: 174 AGLSPIGLPIKP 185
>gi|413950620|gb|AFW83269.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 308
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 97/245 (39%), Gaps = 57/245 (23%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ---------PSSLGTALPLTGNASLGSMGSS 51
+R E C +Y +TG CKFG CKF+HP+ ++ TA +A + +
Sbjct: 70 VRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAK 129
Query: 52 VLP-------SSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNT 104
LP S GS S+ R + G + + +V Q +P+
Sbjct: 130 GLPIRQGEVDCSFYMKTGSCKYGSICR--FNHPDRPGPAADIAFMVPLVQATLPSSA--- 184
Query: 105 YMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTG 164
P+ P + +IY P+RP + C +YM TG
Sbjct: 185 ------PIVPAVVEPLPMIY------------------------PQRPGETVCDFYMKTG 214
Query: 165 TCKYGADCKFHHPKERIAQSAASNIGP------LGLPSRPGQAICSNYSMYGICKFGPTC 218
+CKY CKFHHP R A + N P LP R C+ Y G+C+FG C
Sbjct: 215 SCKYSQKCKFHHPISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMRSGMCRFGAHC 274
Query: 219 RFDHP 223
+FDHP
Sbjct: 275 KFDHP 279
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 132 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE------------ 179
LG G L A S LP RP +P C +Y TG CK+GA CKF+HPK+
Sbjct: 52 LGTGTNNESLIADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETI 111
Query: 180 -----RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
A + GLP R G+ CS Y G CK+G CRF+HP
Sbjct: 112 YTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICRFNHP 160
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 98/252 (38%), Gaps = 66/252 (26%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQP--SSLGTALPLTGNASLGSMGSSVLPSSGLQ 59
R E CPY + CKF CKF+HP+ ++LGT T N SL + S+VLP
Sbjct: 20 RPGEPDCPYLL-NNRCKFKSKCKFNHPKDMVNALGTG---TNNESLIA-DSAVLP----- 69
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP--APGWNTYMGNIGPLS-PTS 116
V PS+ I A G I + P
Sbjct: 70 ------------------------------VRPSEPICVFYAKTGKCKFGAICKFNHPKD 99
Query: 117 IAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
I S LI A + +++ LP R + DC +YM TG+CKYG+ C+F+H
Sbjct: 100 IKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICRFNH 159
Query: 177 PKER-----------IAQS----------AASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
P + Q+ A P+ P RPG+ +C Y G CK+
Sbjct: 160 PDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPGETVCDFYMKTGSCKYS 219
Query: 216 PTCRFDHPYAGY 227
C+F HP + +
Sbjct: 220 QKCKFHHPISRF 231
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPL-----GLPSRPGQAI 202
PERP +PDC Y +N CK+ + CKF+HPK+ + A +N L LP RP + I
Sbjct: 18 PERPGEPDCPYLLNN-RCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C Y+ G CKFG C+F+HP
Sbjct: 77 CVFYAKTGKCKFGAICKFNHP 97
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 78/202 (38%), Gaps = 46/202 (22%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+RQ E C +YM+TGSCK+G C+F+HP P A + + + LPSS
Sbjct: 133 IRQGEVDCSFYMKTGSCKYGSICRFNHPDRPG-----PAADIAFMVPLVQATLPSS---- 183
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP-APGWNT--YMGNIGPLSPTSI 117
AP + P +V P I P PG + G +
Sbjct: 184 -----------APIV-----------PAVVEPLPMIYPQRPGETVCDFYMKTGSCKYSQK 221
Query: 118 AG-----SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADC 172
S S+ GD A + +LP R D C +YM +G C++GA C
Sbjct: 222 CKFHHPISRFAPHSKENGDPQQPATL-------ASLPRREDAEACAFYMRSGMCRFGAHC 274
Query: 173 KFHHPKERIAQSAASNIGPLGL 194
KF HP A S G G+
Sbjct: 275 KFDHPPREEAISELQAAGKEGI 296
>gi|413947008|gb|AFW79657.1| hypothetical protein ZEAMMB73_788382 [Zea mays]
Length = 239
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
S AG+ L S R G LG + A + LPERP + DC YY+ TG C YG C+++
Sbjct: 12 SDAGTGLEESMRKLG-LGEDDE-----AGEEKLPERPGEADCTYYLRTGACGYGERCRYN 65
Query: 176 HPKERIA-QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
HP++R A + + P RPGQ +C Y+ G CKFG C+FDHP
Sbjct: 66 HPRDRPAPVNGVGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHP 114
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 140 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 199
+ + PERP QP C YY GTCK+G++CKF HP+E A N G P R G
Sbjct: 77 VGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRESGFVPVALNNS--GFPLRLG 134
Query: 200 QAICSNYSMYGICKFGPTCRFDHPYAGY 227
+ CS Y G CKFG TC+F HP G+
Sbjct: 135 EKECSYYMKTGHCKFGGTCKFHHPELGF 162
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YYM+TG CKFG CKFHHP+ L T P M V PS +
Sbjct: 131 LRLGEKECSYYMKTGHCKFGGTCKFHHPELGFL-TETP--------GMYPPVQPSP-ISS 180
Query: 61 AGSLP---TWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYM 106
P W + R + S L G Y P+++ P+ ++P GWN Y+
Sbjct: 181 PHPYPHHSNWQMGRPAVVPGSFLPG--PYPPMMLPPT--VMPMQGWNPYV 226
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R E C YY+RTG+C +G C+++HP+
Sbjct: 41 RPGEADCTYYLRTGACGYGERCRYNHPR 68
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
R + C YY + G+CKFG CKF HP+ S
Sbjct: 88 RPGQPLCEYYAKNGTCKFGSNCKFDHPRESGF 119
>gi|413950617|gb|AFW83266.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 333
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 93/236 (39%), Gaps = 57/236 (24%)
Query: 10 YYMRTGSCKFGVACKFHHPQ---------PSSLGTALPLTGNASLGSMGSSVLP------ 54
+Y +TG CKFG CKF+HP+ ++ TA +A + + LP
Sbjct: 104 FYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQGEV 163
Query: 55 -SSGLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLS 113
S GS S+ R + G + + +V Q +P+ P+
Sbjct: 164 DCSFYMKTGSCKYGSICR--FNHPDRPGPAADIAFMVPLVQATLPSSA---------PIV 212
Query: 114 PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCK 173
P + +IY P+RP + C +YM TG+CKY CK
Sbjct: 213 PAVVEPLPMIY------------------------PQRPGETVCDFYMKTGSCKYSQKCK 248
Query: 174 FHHPKERIAQSAASNIGP------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
FHHP R A + N P LP R C+ Y G+C+FG C+FDHP
Sbjct: 249 FHHPISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMRSGMCRFGAHCKFDHP 304
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 107/262 (40%), Gaps = 61/262 (23%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQP--SSLGTALPLTGNASLGSMGSSVLPSSGLQ 59
R E CPY + CKF CKF+HP+ ++LGT T N SL + S+VLP
Sbjct: 20 RPGEPDCPYLL-NNRCKFKSKCKFNHPKDMVNALGTG---TNNESLIA-DSAVLPVRP-- 72
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIV-----SPSQGIVPAPGWNTY-------MG 107
S + +SY+ +I SPS + P + Y G
Sbjct: 73 ----------------SEPICVVRSYIAVIFFFSWHSPS--FLGCPVFQFYAKTGKCKFG 114
Query: 108 NIGPLS-PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTC 166
I + P I S LI A + +++ LP R + DC +YM TG+C
Sbjct: 115 AICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTGSC 174
Query: 167 KYGADCKFHHPKE-----------RIAQS----------AASNIGPLGLPSRPGQAICSN 205
KYG+ C+F+HP + Q+ A P+ P RPG+ +C
Sbjct: 175 KYGSICRFNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPGETVCDF 234
Query: 206 YSMYGICKFGPTCRFDHPYAGY 227
Y G CK+ C+F HP + +
Sbjct: 235 YMKTGSCKYSQKCKFHHPISRF 256
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 78/202 (38%), Gaps = 46/202 (22%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+RQ E C +YM+TGSCK+G C+F+HP P A + + + LPSS
Sbjct: 158 IRQGEVDCSFYMKTGSCKYGSICRFNHPDRPG-----PAADIAFMVPLVQATLPSS---- 208
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP-APGWNT--YMGNIGPLSPTSI 117
AP + P +V P I P PG + G +
Sbjct: 209 -----------APIV-----------PAVVEPLPMIYPQRPGETVCDFYMKTGSCKYSQK 246
Query: 118 AG-----SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADC 172
S S+ GD A + +LP R D C +YM +G C++GA C
Sbjct: 247 CKFHHPISRFAPHSKENGDPQQPATL-------ASLPRREDAEACAFYMRSGMCRFGAHC 299
Query: 173 KFHHPKERIAQSAASNIGPLGL 194
KF HP A S G G+
Sbjct: 300 KFDHPPREEAISELQAAGKEGI 321
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 32/106 (30%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPL-----GLPSRPGQAI 202
PERP +PDC Y +N CK+ + CKF+HPK+ + A +N L LP RP + I
Sbjct: 18 PERPGEPDCPYLLNN-RCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 203 C-------------------------SNYSMYGICKFGPTCRFDHP 223
C Y+ G CKFG C+F+HP
Sbjct: 77 CVVRSYIAVIFFFSWHSPSFLGCPVFQFYAKTGKCKFGAICKFNHP 122
>gi|168028390|ref|XP_001766711.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682143|gb|EDQ68564.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 323
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 16/93 (17%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS----------------AASNIG 190
+LP+RP +PDC Y+M TG C+YG+ C+F+HPKE++ S A+
Sbjct: 44 SLPQRPTEPDCAYFMKTGECRYGSKCRFNHPKEKLESSNTDEQSSVVNQAAPINPATTFN 103
Query: 191 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
GLP RPG+ C Y G CK+G CR++HP
Sbjct: 104 SKGLPLRPGEGNCVFYGKTGSCKYGTACRYNHP 136
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI--------AQSAASNIGPLGLPSRPGQ 200
P+RP +PDC +Y+ TG C +GA CKFHHP +RI A + GLP R +
Sbjct: 188 PQRPGEPDCTFYIKTGECSFGATCKFHHPPDRIPSGIPKPAKNQATVKLSLAGLPRRETE 247
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C+ Y G CKFG TC++DHP
Sbjct: 248 TPCAYYMKTGACKFGQTCKYDHP 270
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
P+RP + C YYM T TC +G C++ HP A + + P LP RP + C+ +
Sbjct: 2 PQRPGEKVCAYYMITRTCSFGVTCRYDHPAWVTA--VGTPVDPSSLPQRPTEPDCAYFMK 59
Query: 209 YGICKFGPTCRFDHP 223
G C++G CRF+HP
Sbjct: 60 TGECRYGSKCRFNHP 74
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 88/243 (36%), Gaps = 55/243 (22%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP-----------QPSSLGTALPLTGNASLGSMGS 50
R E C Y+M+TG C++G C+F+HP Q S + A P+ + S G
Sbjct: 48 RPTEPDCAYFMKTGECRYGSKCRFNHPKEKLESSNTDEQSSVVNQAAPINPATTFNSKGL 107
Query: 51 SVLPSSG----------LQYAGS---------LPTWSLQ--RAPYLSSRLQGTQSYMPLI 89
+ P G +Y + LP S Q A Y + Q +Q Y
Sbjct: 108 PLRPGEGNCVFYGKTGSCKYGTACRYNHPEILLPDVSGQATTADYAYTSTQNSQEYAYAA 167
Query: 90 VSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMH---------- 139
V P + MG P P + Y + GA + H
Sbjct: 168 AQAYHQNV-TPMYVASMGLPHPQRPGEPDCT--FYIKTGECSFGATCKFHHPPDRIPSGI 224
Query: 140 --------ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASNI 189
+ S LP R + C YYM TG CK+G CK+ H P+E IA++
Sbjct: 225 PKPAKNQATVKLSLAGLPRRETETPCAYYMKTGACKFGQTCKYDHPPPQEIIARAVEQAR 284
Query: 190 GPL 192
G +
Sbjct: 285 GEV 287
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 34/114 (29%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI------------AQSAASN--- 188
+S+ LP RP + +C +Y TG+CKYG C+++HP+ + A ++ N
Sbjct: 103 NSKGLPLRPGEGNCVFYGKTGSCKYGTACRYNHPEILLPDVSGQATTADYAYTSTQNSQE 162
Query: 189 -----------------IGPLGL--PSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ +GL P RPG+ C+ Y G C FG TC+F HP
Sbjct: 163 YAYAAAQAYHQNVTPMYVASMGLPHPQRPGEPDCTFYIKTGECSFGATCKFHHP 216
>gi|449533652|ref|XP_004173786.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like,
partial [Cucumis sativus]
Length = 266
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
A+S++LPER PDC Y++ T CK+G+ CKF+HPK+R A LP RP + +
Sbjct: 62 ANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDASSLPERPSEPL 121
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C+ Y G CKFG C+F HP
Sbjct: 122 CAFYVKTGNCKFGINCKFHHP 142
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 55/114 (48%), Gaps = 32/114 (28%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK----------------------E 179
+ + +LPERP +P C +Y+ TG CK+G +CKFHHPK E
Sbjct: 107 KSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSEQTLMVKTEE 166
Query: 180 R----------IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
R I+ S A GLP RPG+ C Y G CK+G TCR++HP
Sbjct: 167 RAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCRYNHP 220
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 35/181 (19%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS-----MGSSVLPSS 56
R + CPY+++T CKFG CKF+HP+ S + +SL + + + +
Sbjct: 70 RLGDPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDASSLPERPSEPLCAFYVKTG 129
Query: 57 GLQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 116
++ + + LS G ++ + + G+ + P
Sbjct: 130 NCKFGINCKFHHPKDIQILSGEEYGNSEQTLMVKTEERA-----------GDFKLVKPPI 178
Query: 117 IAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
++++S+ LP RP + DC +Y+ TG+CKYG C+++H
Sbjct: 179 SLSPAIMHNSK-------------------GLPIRPGEVDCPFYLKTGSCKYGTTCRYNH 219
Query: 177 P 177
P
Sbjct: 220 P 220
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP 38
+R E CP+Y++TGSCK+G C+++HP +++ + P
Sbjct: 193 IRPGEVDCPFYLKTGSCKYGTTCRYNHPDRNAINPSTP 230
>gi|222635668|gb|EEE65800.1| hypothetical protein OsJ_21508 [Oryza sativa Japonica Group]
Length = 830
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 27/106 (25%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP------------------------KER 180
++ P RP +PDC YY+ G+CK+G +C+F+HP K +
Sbjct: 227 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 286
Query: 181 IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
+ Q + LGLP RPG +CS Y GICKFG C+FDHP G
Sbjct: 287 VEQV---KLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPG 329
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
P RP +PDC YY+ G+CK+G C ++HP R A P RPG+ CS Y
Sbjct: 185 PRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVK 244
Query: 209 YGICKFGPTCRFDHP 223
+G CKFG CRF+HP
Sbjct: 245 FGSCKFGMNCRFNHP 259
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 44
C YYM G CKFG CKF HP P S ++ NA+
Sbjct: 306 CSYYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNAN 342
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHPQP 30
E C YY++ GSCKFG++C ++HP P
Sbjct: 190 EPDCSYYVKFGSCKFGISCVYNHPDP 215
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHP 28
E C YY++ GSCKFG+ C+F+HP
Sbjct: 236 EPDCSYYVKFGSCKFGMNCRFNHP 259
>gi|218198295|gb|EEC80722.1| hypothetical protein OsI_23177 [Oryza sativa Indica Group]
Length = 705
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP---------------------KERIAQ 183
++ P RP +PDC YY+ G+CK+G +C+F+HP E ++
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 184 SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
+ LGLP RPG +CS Y GICKFG C+FDHP G
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPG 186
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
P RP +PDC YY+ G+CK+G C ++HP R A P RPG+ CS Y
Sbjct: 42 PRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVK 101
Query: 209 YGICKFGPTCRFDHP 223
+G CKFG CRF+HP
Sbjct: 102 FGSCKFGMNCRFNHP 116
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 44
C YYM G CKFG CKF HP P S ++ NA+
Sbjct: 163 CSYYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNAN 199
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQP 30
R E C YY++ GSCKFG++C ++HP P
Sbjct: 44 RPGEPDCSYYVKFGSCKFGISCVYNHPDP 72
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY++ GSCKFG+ C+F+HP
Sbjct: 90 RPGEPDCSYYVKFGSCKFGMNCRFNHP 116
>gi|115468286|ref|NP_001057742.1| Os06g0520600 [Oryza sativa Japonica Group]
gi|75252736|sp|Q5Z5Q3.1|C3H43_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 43;
Short=OsC3H43
gi|54291262|dbj|BAD62014.1| translation initiation factor eIF-4F isozyme form subunit p82-like
[Oryza sativa Japonica Group]
gi|113595782|dbj|BAF19656.1| Os06g0520600 [Oryza sativa Japonica Group]
Length = 711
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP---------------------KERIAQ 183
++ P RP +PDC YY+ G+CK+G +C+F+HP E ++
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 184 SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
+ LGLP RPG +CS Y GICKFG C+FDHP G
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPG 186
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
P RP +PDC YY+ G+CK+G C ++HP R A P RPG+ CS Y
Sbjct: 42 PRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVK 101
Query: 209 YGICKFGPTCRFDHP 223
+G CKFG CRF+HP
Sbjct: 102 FGSCKFGMNCRFNHP 116
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 44
C YYM G CKFG CKF HP P S ++ NA+
Sbjct: 163 CSYYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNAN 199
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQP 30
R E C YY++ GSCKFG++C ++HP P
Sbjct: 44 RPGEPDCSYYVKFGSCKFGISCVYNHPDP 72
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY++ GSCKFG+ C+F+HP
Sbjct: 90 RPGEPDCSYYVKFGSCKFGMNCRFNHP 116
>gi|194705310|gb|ACF86739.1| unknown [Zea mays]
Length = 235
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
Query: 106 MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 165
+G+ G + + G+ L YSS + G Q H PERP QP+C+YYM TG
Sbjct: 34 IGHHGSSTAIAYGGTYLPYSS-STGQSSNNHQEH-------GFPERPGQPECQYYMRTGD 85
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
CK+G CK++HP++ + L LP RPG C+ Y+ G C++G C++DHP
Sbjct: 86 CKFGTTCKYNHPQDWSTSKSNYMFSHLCLPLRPGAQPCTYYAQNGYCRYGIACKYDHPMG 145
Query: 226 GYPINYGLSLPPLSIL 241
+ Y S PLS +
Sbjct: 146 T--LGYSSSALPLSDM 159
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R + C YYMRTG CKFG CK++HPQ
Sbjct: 71 RPGQPECQYYMRTGDCKFGTTCKYNHPQ 98
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG---TALPLT 40
+R + C YY + G C++G+ACK+ HP +LG +ALPL+
Sbjct: 116 LRPGAQPCTYYAQNGYCRYGIACKYDHPM-GTLGYSSSALPLS 157
>gi|219888781|gb|ACL54765.1| unknown [Zea mays]
gi|414879021|tpg|DAA56152.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 192
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 133 GAGAQMHILSASSQ---NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASN 188
G QM + S ++ + PERP +PDC YY+ TG C++G C+F+HP +R +A ++A
Sbjct: 52 GMWQQMAMDSGATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASARM 111
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R GQ C Y G CKFGPTC+F HP
Sbjct: 112 KG--EYPERAGQPECQYYLKTGTCKFGPTCKFHHP 144
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + G P RP
Sbjct: 116 PERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRP 165
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R + C YY++TG+CKFG CKFHHP+
Sbjct: 118 RAGQPECQYYLKTGTCKFGPTCKFHHPR 145
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG++C+F+HP +L A
Sbjct: 73 RPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIA 107
>gi|255635495|gb|ACU18099.1| unknown [Glycine max]
Length = 235
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
+ PER +P C+YY+ TGTCK+GA CKFHHPK + + + G P R G+ CS Y
Sbjct: 56 DYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNIYGYPLRLGEKECSYY 115
Query: 207 SMYGICKFGPTCRFDHP 223
G CKFG +C+F HP
Sbjct: 116 LKTGQCKFGISCKFHHP 132
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R EK C YY++TG CKFG++CKFHHPQP+ GT+LP + + S +P QY
Sbjct: 105 LRLGEKECSYYLKTGQCKFGISCKFHHPQPA--GTSLPTSAPQFYQQVQSPTVPLP-EQY 161
Query: 61 AGSLPTWSLQRAPYL-SSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSPTS-- 116
G+ + + R P L S +QG +Y P+++SP G+V PGW+ Y + P LSP +
Sbjct: 162 GGASTSLRVARPPVLPGSYVQG--AYGPVLLSP--GVVQFPGWSHYSAPVSPVLSPGTQP 217
Query: 117 IAGSNLIY 124
+ G+ +Y
Sbjct: 218 VVGATSLY 225
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 139 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
H+ ++ PERP P+C YYM TG C YG C+F+HP++R A +AA P R
Sbjct: 3 HLTLGGVESYPERPGVPNCVYYMRTGVCGYGDRCRFNHPRDRAAVAAAVRAT-GDYPERV 61
Query: 199 GQAICSNYSMYGICKFGPTCRFDHPYAG 226
G+ C Y G CKFG +C+F HP G
Sbjct: 62 GEPPCQYYLKTGTCKFGASCKFHHPKNG 89
>gi|222635666|gb|EEE65798.1| hypothetical protein OsJ_21506 [Oryza sativa Japonica Group]
Length = 718
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 20/98 (20%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--------------------SN 188
P+RP + DC +Y+ G CKYG +C+F+HP +R+ Q
Sbjct: 99 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVK 158
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
+ LGLP RPG +CS Y GICKFG C+F HP +G
Sbjct: 159 LNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSG 196
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
Q P RP PDC YY+ G+CK+G C ++HP + A L P RPG+ C +
Sbjct: 55 QEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKH-----AGGCDKLEHPQRPGEHDCLH 109
Query: 206 YSMYGICKFGPTCRFDHP 223
Y +G CK+G CRF+HP
Sbjct: 110 YLRFGRCKYGMNCRFNHP 127
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP C YYMN G CK+G++CKFHHP
Sbjct: 164 LPLRPGTGLCSYYMNRGICKFGSNCKFHHP 193
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 16/25 (64%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSS 32
C YYM G CKFG CKFHHP S
Sbjct: 173 CSYYMNRGICKFGSNCKFHHPNSGS 197
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ P P RPG CS Y +G CKFG C ++HP
Sbjct: 52 VEPQEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHP 86
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHP 28
E C +Y+R G CK+G+ C+F+HP
Sbjct: 104 EHDCLHYLRFGRCKYGMNCRFNHP 127
>gi|307103601|gb|EFN51860.1| hypothetical protein CHLNCDRAFT_27455, partial [Chlorella
variabilis]
Length = 71
Score = 81.6 bits (200), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 207
P+RP QP C +Y TG C++G CK+HHP E A + P GLP RPGQ +C+ Y
Sbjct: 1 FPQRPGQPVCDFYQKTGHCRFGELCKYHHPAE-----FAVRLNPRGLPVRPGQPVCTFYQ 55
Query: 208 MYGICKFGPTCRFDHP 223
G CKFGP C++ HP
Sbjct: 56 KTGECKFGPACKYHHP 71
Score = 45.4 bits (106), Expect = 0.035, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
+ LP RP QP C +Y TG CK+G CK+HHP
Sbjct: 40 RGLPVRPGQPVCTFYQKTGECKFGPACKYHHP 71
Score = 39.3 bits (90), Expect = 2.6, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + C +Y +TG CKFG ACK+HHP
Sbjct: 44 VRPGQPVCTFYQKTGECKFGPACKYHHP 71
>gi|125555540|gb|EAZ01146.1| hypothetical protein OsI_23175 [Oryza sativa Indica Group]
Length = 628
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 20/98 (20%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--------------------SN 188
P+RP + DC +Y+ G CKYG +C+F+HP +R+ Q
Sbjct: 99 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVK 158
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
+ LGLP RPG +CS Y GICKFG C+F HP +G
Sbjct: 159 LNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSG 196
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
Q P RP PDC YY+ G+CK+G C ++HP + A L P RPG+ C +
Sbjct: 55 QEYPRRPGVPDCSYYVEFGSCKFGMGCLYNHPAKH-----AGGCDKLEHPQRPGEHDCLH 109
Query: 206 YSMYGICKFGPTCRFDHP 223
Y +G CK+G CRF+HP
Sbjct: 110 YLRFGRCKYGMNCRFNHP 127
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP C YYMN G CK+G++CKFHHP
Sbjct: 164 LPLRPGTGLCSYYMNRGICKFGSNCKFHHP 193
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 16/25 (64%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSS 32
C YYM G CKFG CKFHHP S
Sbjct: 173 CSYYMNRGICKFGSNCKFHHPNSGS 197
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ P P RPG CS Y +G CKFG C ++HP
Sbjct: 52 VEPQEYPRRPGVPDCSYYVEFGSCKFGMGCLYNHP 86
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 5 EKSCPYYMRTGSCKFGVACKFHHP 28
E C +Y+R G CK+G+ C+F+HP
Sbjct: 104 EHDCLHYLRFGRCKYGMNCRFNHP 127
>gi|168037437|ref|XP_001771210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677451|gb|EDQ63921.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 278
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 99/244 (40%), Gaps = 53/244 (21%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP----QPSSLGTALPLTGNASLGSMGSSVLPSSG 57
R E C Y+M+TG C++G C+F+HP +PS+ +A+ G+ P++
Sbjct: 53 RPAEPDCAYFMKTGECRYGPQCRFNHPKEKLEPSNTDDQYSAASSAAFGN------PATA 106
Query: 58 LQYAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 117
G +PL V G + G G
Sbjct: 107 YNTNG-----------------------LPLRPVTCARDVQGEGNCVFYGKTGSCKHGPA 143
Query: 118 AGSN---LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDC-------RYYMNTGTCK 167
N ++ S R Q D + I S++L Q C ++Y+ TG C
Sbjct: 144 CRYNHPEILLSMRMQLDNNLSVKKIIPMQLSRSL--ETGQSTCTQQSNQDKFYIKTGECS 201
Query: 168 YGADCKFHHPKERIAQSA---ASNIGPL-----GLPSRPGQAICSNYSMYGICKFGPTCR 219
+GA CKFHHP +RI A N G + GLP R +A C+ Y G CKFG TC+
Sbjct: 202 FGATCKFHHPPDRIPTGIPKPAKNQGLVKLSLAGLPRRETEAPCAYYMKTGACKFGQTCK 261
Query: 220 FDHP 223
+DHP
Sbjct: 262 YDHP 265
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 24/100 (24%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI----------AQSAASNIGPL----- 192
LP+RP +PDC Y+M TG C+YG C+F+HPKE++ A S+A+ P
Sbjct: 50 LPQRPAEPDCAYFMKTGECRYGPQCRFNHPKEKLEPSNTDDQYSAASSAAFGNPATAYNT 109
Query: 193 -GLPSRP--------GQAICSNYSMYGICKFGPTCRFDHP 223
GLP RP G+ C Y G CK GP CR++HP
Sbjct: 110 NGLPLRPVTCARDVQGEGNCVFYGKTGSCKHGPACRYNHP 149
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI---AQSAASNIGPLGLPSRPGQAICSN 205
P+RP Q C YYM T TC +G C++ HP + + + P LP RP + C+
Sbjct: 2 PQRPGQKVCAYYMATRTCSFGVTCRYDHPACGTGGQVTAVGTPVDPCLLPQRPAEPDCAY 61
Query: 206 YSMYGICKFGPTCRFDHP 223
+ G C++GP CRF+HP
Sbjct: 62 FMKTGECRYGPQCRFNHP 79
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 33
R+ E C YYM+TG+CKFG CK+ HP P +
Sbjct: 239 RETEAPCAYYMKTGACKFGQTCKYDHPPPQEI 270
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 195 PSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
P RPGQ +C+ Y C FG TCR+DHP G
Sbjct: 2 PQRPGQKVCAYYMATRTCSFGVTCRYDHPACG 33
>gi|115468284|ref|NP_001057741.1| Os06g0519400 [Oryza sativa Japonica Group]
gi|122168174|sp|Q0DBW8.1|C3H42_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 42;
Short=OsC3H42
gi|113595781|dbj|BAF19655.1| Os06g0519400 [Oryza sativa Japonica Group]
Length = 279
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 34/144 (23%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--------------------SN 188
P+RP + DC +Y+ G CKYG +C+F+HP +R+ Q
Sbjct: 118 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVK 177
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY------------PINYGLSLP 236
+ LGLP RPG +CS Y GICKFG C+F HP +G I+ G+++
Sbjct: 178 LNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSGHEKWDGSLQTNQISSGVNI- 236
Query: 237 PLSILDSSLMNHQAISATHSIETS 260
S+LD +N Q + + + S
Sbjct: 237 -YSVLDHGELNEQPVPSKDDFQVS 259
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
Q P RP PDC YY+ G+CK+G C ++HP + A L P RPG+ C +
Sbjct: 74 QEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKH-----AGGCDKLEHPQRPGEHDCLH 128
Query: 206 YSMYGICKFGPTCRFDHP 223
Y +G CK+G CRF+HP
Sbjct: 129 YLRFGRCKYGMNCRFNHP 146
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP RP C YYMN G CK+G++CKFHHP
Sbjct: 183 LPLRPGTGLCSYYMNRGICKFGSNCKFHHP 212
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 16/25 (64%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSS 32
C YYM G CKFG CKFHHP S
Sbjct: 192 CSYYMNRGICKFGSNCKFHHPNSGS 216
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ P P RPG CS Y +G CKFG C ++HP
Sbjct: 71 VEPQEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHP 105
>gi|219362557|ref|NP_001136614.1| uncharacterized protein LOC100216738 [Zea mays]
gi|194696378|gb|ACF82273.1| unknown [Zea mays]
Length = 339
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 18/197 (9%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ-- 59
R E CP+Y++TGSCKFG CKFHHP+ + P + S+ + + LQ
Sbjct: 141 RPSEPDCPFYVKTGSCKFGANCKFHHPKDITPNMQGPASPKRSVAAKEHHAAARATLQDQ 200
Query: 60 --YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 117
P Q + + I + S+ I+ + GW+ + T
Sbjct: 201 MYQQQKFPERPGQPDCRYYMQFGKCKFQSACIFNHSKDIL-SSGWHPAECPFYMKTRTCQ 259
Query: 118 AGSNLIYSSRNQGDLGAGAQM------HILSASSQNL-------PERPDQPDCRYYMNTG 164
GS + G G + H + S+N+ PERPD+ +C +YM G
Sbjct: 260 FGSACEFYHPKDRCSGRGGVIDGTDYGHDFATKSRNVLQELAIYPERPDELECSHYMKHG 319
Query: 165 TCKYGADCKFHHPKERI 181
CKY +CKFHHP++R+
Sbjct: 320 YCKYKMNCKFHHPRDRL 336
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 101/291 (34%), Gaps = 97/291 (33%)
Query: 7 SCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSLPT 66
CP+ +R G+CKF +C+++HP+ S+ P Q
Sbjct: 75 ECPFLLRFGNCKFASSCQYYHPK----------------DKFPSTYHPEDKFQSRYHQKE 118
Query: 67 WSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNI----------------- 109
S + P L G L+V P + P + G+
Sbjct: 119 KSSRHHPKKEPALSGE-----LMVYPDRPSEPDCPFYVKTGSCKFGANCKFHHPKDITPN 173
Query: 110 --GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTG--- 164
GP SP + +++ A A + Q PERP QPDCRYYM G
Sbjct: 174 MQGPASPKRSVAAKEHHAA-------ARATLQDQMYQQQKFPERPGQPDCRYYMQFGKCK 226
Query: 165 ------------------------------TCKYGADCKFHHPKER-------------- 180
TC++G+ C+F+HPK+R
Sbjct: 227 FQSACIFNHSKDILSSGWHPAECPFYMKTRTCQFGSACEFYHPKDRCSGRGGVIDGTDYG 286
Query: 181 --IAQSAASNIGPLGL-PSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 228
A + + + L + P RP + CS+Y +G CK+ C+F HP P
Sbjct: 287 HDFATKSRNVLQELAIYPERPDELECSHYMKHGYCKYKMNCKFHHPRDRLP 337
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 27/135 (20%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI---------------AQSAASNI 189
Q + P++P+C + + G CK+ + C+++HPK++ + +S
Sbjct: 64 KQEHEDYPERPECPFLLRFGNCKFASSCQYYHPKDKFPSTYHPEDKFQSRYHQKEKSSRH 123
Query: 190 GP----------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
P + P RP + C Y G CKFG C+F HP P G + P S
Sbjct: 124 HPKKEPALSGELMVYPDRPSEPDCPFYVKTGSCKFGANCKFHHPKDITPNMQGPASPKRS 183
Query: 240 ILDSSLMNHQAISAT 254
+ ++ +H A AT
Sbjct: 184 V--AAKEHHAAARAT 196
>gi|295913146|gb|ADG57833.1| transcription factor [Lycoris longituba]
Length = 148
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 67/187 (35%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS-MGSSVLPSSGLQ 59
+R E CP+Y++TGSCK+G C+++HP+ +S+ N LG+ +G +++PS
Sbjct: 21 IRPGETDCPFYLKTGSCKYGATCRYNHPERTSI--------NPPLGANIGQTIMPSGTSL 72
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
AG +V+P+ ++P+ + PL
Sbjct: 73 PAG--------------------------LVNPAANLIPS---------LDPL------- 90
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
Q LG M+ P+RP QP+C +YM TG C +G CKFHHP +
Sbjct: 91 -------LAQASLGVCPTMY---------PQRPGQPECDFYMKTGRCNFGERCKFHHPVD 134
Query: 180 RIAQSAA 186
R A A+
Sbjct: 135 RSAPKAS 141
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 53/121 (43%), Gaps = 38/121 (31%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIG--------- 190
L +S+ LP RP + DC +Y+ TG+CKYGA C+++HP+ I +NIG
Sbjct: 12 LLHNSKGLPIRPGETDCPFYLKTGSCKYGATCRYNHPERTSINPPLGANIGQTIMPSGTS 71
Query: 191 -PLGL---------------------------PSRPGQAICSNYSMYGICKFGPTCRFDH 222
P GL P RPGQ C Y G C FG C+F H
Sbjct: 72 LPAGLVNPAANLIPSLDPLLAQASLGVCPTMYPQRPGQPECDFYMKTGRCNFGERCKFHH 131
Query: 223 P 223
P
Sbjct: 132 P 132
>gi|397567414|gb|EJK45571.1| hypothetical protein THAOC_35807 [Thalassiosira oceanica]
Length = 505
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNY 206
P R +PDCR Y+ TG CKYG CK++HP ER +N G P RPG+ C Y
Sbjct: 9 PLRLGEPDCRDYLRTGRCKYGESCKYNHPLNVERGGGVKPANPGEPLYPVRPGEPPCQYY 68
Query: 207 SMYGICKFGPTCRFDHPYAGYPIN 230
+G CKFG C+FDHP G P N
Sbjct: 69 LKHGTCKFGQACKFDHP-TGAPRN 91
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 19/94 (20%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKER----------IAQSAASNIGPLG- 193
P RP +P C+YY+ GTCK+G CKF H P+ R + + +S G
Sbjct: 57 PVRPGEPPCQYYLKHGTCKFGQACKFDHPTGAPRNRNNLPAGQYVFVTSNGSSTTVAEGT 116
Query: 194 ----LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
LP RP + C + G CK+G TC+F HP
Sbjct: 117 SVQVLPQRPSEPNCIYFLRNGKCKYGATCKFHHP 150
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 10/65 (15%)
Query: 127 RNQGDLGAGAQMHILS----------ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
RN+ +L AG + + S S Q LP+RP +P+C Y++ G CKYGA CKFHH
Sbjct: 90 RNRNNLPAGQYVFVTSNGSSTTVAEGTSVQVLPQRPSEPNCIYFLRNGKCKYGATCKFHH 149
Query: 177 PKERI 181
P + +
Sbjct: 150 PLDAL 154
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E +C Y++R G CK+G CKFHHP
Sbjct: 124 RPSEPNCIYFLRNGKCKYGATCKFHHP 150
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R E C YY++ G+CKFG ACKF HP
Sbjct: 58 VRPGEPPCQYYLKHGTCKFGQACKFDHP 85
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R E C Y+RTG CK+G +CK++HP
Sbjct: 10 LRLGEPDCRDYLRTGRCKYGESCKYNHP 37
>gi|223973265|gb|ACN30820.1| unknown [Zea mays]
gi|413950619|gb|AFW83268.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 170
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 132 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE------------ 179
LG G L A S LP RP +P C +Y TG CK+GA CKF+HPK+
Sbjct: 52 LGTGTNNESLIADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETI 111
Query: 180 -----RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
A + GLP R G+ CS Y G CK+G CRF+HP
Sbjct: 112 YTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICRFNHP 160
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPL-----GLPSRPGQAI 202
PERP +PDC Y +N CK+ + CKF+HPK+ + A +N L LP RP + I
Sbjct: 18 PERPGEPDCPYLLNN-RCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C Y+ G CKFG C+F+HP
Sbjct: 77 CVFYAKTGKCKFGAICKFNHP 97
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
+RQ E C +YM+TGSCK+G C+F+HP
Sbjct: 133 IRQGEVDCSFYMKTGSCKYGSICRFNHPD 161
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
+R E C +Y +TG CKFG CKF+HP+
Sbjct: 70 VRPSEPICVFYAKTGKCKFGAICKFNHPK 98
>gi|295913510|gb|ADG58004.1| transcription factor [Lycoris longituba]
Length = 170
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-------AQSAASNIGPLG 193
L ++++ PERP + DC YY+ T CK+G CKF+HPK+++ + A I
Sbjct: 67 LVPATESFPERPGERDCPYYIKTQKCKFGFRCKFNHPKDKLNALTVGGDRVGAGFIDHSL 126
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
LP RP + IC YS G CKFG C+F HP
Sbjct: 127 LPERPSEPICVFYSKTGKCKFGMNCKFHHP 156
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 46/178 (25%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R EK C +YM T +CKFG ACKF HP +P G + ++P++
Sbjct: 25 RPGEKDCTHYMLTRTCKFGEACKFDHP------IWVPEGGIPDWKEV--PLVPATE---- 72
Query: 62 GSLPTWSLQR-APYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
S P +R PY + + P L+ ++ G
Sbjct: 73 -SFPERPGERDCPYYIKTQKCKFGFRCKFNHPKDK----------------LNALTVGGD 115
Query: 121 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
+ GAG H L LPERP +P C +Y TG CK+G +CKFHHPK
Sbjct: 116 RV----------GAGFIDHSL------LPERPSEPICVFYSKTGKCKFGMNCKFHHPK 157
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKERIAQSAASNIGPL--GLPSRPGQAI 202
P+RP + DC +YM T TCK+G CKF H P+ I + P P RPG+
Sbjct: 23 PQRPGEKDCTHYMLTRTCKFGEACKFDHPIWVPEGGIPDWKEVPLVPATESFPERPGERD 82
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C Y CKFG C+F+HP
Sbjct: 83 CPYYIKTQKCKFGFRCKFNHP 103
>gi|414872185|tpg|DAA50742.1| TPA: hypothetical protein ZEAMMB73_704527 [Zea mays]
Length = 741
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 18/197 (9%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ-- 59
R E CP+Y++TGSCKFG CKFHHP+ + P + S+ + + LQ
Sbjct: 543 RPSEPDCPFYVKTGSCKFGANCKFHHPKDITPNMQGPASPKRSVAAKEHHAAARATLQDQ 602
Query: 60 --YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSI 117
P Q + + I + S+ I+ + GW+ + T
Sbjct: 603 MYQQQKFPERPGQPDCRYYMQFGKCKFQSACIFNHSKDIL-SSGWHPAECPFYMKTRTCQ 661
Query: 118 AGSNLIYSSRNQGDLGAGAQM------HILSASSQNL-------PERPDQPDCRYYMNTG 164
GS + G G + H + S+N+ PERPD+ +C +YM G
Sbjct: 662 FGSACEFYHPKDRCSGRGGVIDGTDYGHDFATKSRNVLQELAIYPERPDELECSHYMKHG 721
Query: 165 TCKYGADCKFHHPKERI 181
CKY +CKFHHP++R+
Sbjct: 722 YCKYKMNCKFHHPRDRL 738
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 101/291 (34%), Gaps = 97/291 (33%)
Query: 7 SCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSLPT 66
CP+ +R G+CKF +C+++HP+ S+ P Q
Sbjct: 477 ECPFLLRFGNCKFASSCQYYHPK----------------DKFPSTYHPEDKFQSRYHQKE 520
Query: 67 WSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNI----------------- 109
S + P L G L+V P + P + G+
Sbjct: 521 KSSRHHPKKEPALSGE-----LMVYPDRPSEPDCPFYVKTGSCKFGANCKFHHPKDITPN 575
Query: 110 --GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTG--- 164
GP SP + +++ A A + Q PERP QPDCRYYM G
Sbjct: 576 MQGPASPKRSVAAKEHHAA-------ARATLQDQMYQQQKFPERPGQPDCRYYMQFGKCK 628
Query: 165 ------------------------------TCKYGADCKFHHPKER-------------- 180
TC++G+ C+F+HPK+R
Sbjct: 629 FQSACIFNHSKDILSSGWHPAECPFYMKTRTCQFGSACEFYHPKDRCSGRGGVIDGTDYG 688
Query: 181 --IAQSAASNIGPLGL-PSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 228
A + + + L + P RP + CS+Y +G CK+ C+F HP P
Sbjct: 689 HDFATKSRNVLQELAIYPERPDELECSHYMKHGYCKYKMNCKFHHPRDRLP 739
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK-------------ERIAQSAASNIGP 191
S+ P++P + +CR+YM+TG C YG+ C F+HP+ +R ++ +
Sbjct: 278 SEGYPQKPGKLNCRFYMSTGRCSYGSSCHFNHPRLKAKLEVSSFPSEQRNHEAEFLELNR 337
Query: 192 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+GLP R G C Y G C++G C F+HP
Sbjct: 338 VGLPIREGARKCIYYMRNGTCRYGKKCCFNHP 369
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 53/282 (18%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R+ + C YYMR G+C++G C F+HP+ L + + + G +++ S +
Sbjct: 342 IREGARKCIYYMRNGTCRYGKKCCFNHPE-----QVLDVQRHTATGWDDTNLQSSPHSKK 396
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVS---PSQGIVPAPGWNTYMGNIGPLSPTSI 117
+ T + G++ P I+ P Q + P+ P ++
Sbjct: 397 SPEHKT--------MDDISSGSEVLPPNILRMLLPPQNVPPSTKEKEIRIKKDPDWASAS 448
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
S+ S+ + D Q H ++ PER P+C + + G CK+ + C+++HP
Sbjct: 449 DDSDGCCSA-DSSDGPLCKQEH------EDYPER---PECPFLLRFGNCKFASSCQYYHP 498
Query: 178 KERI---------------AQSAASNIGP----------LGLPSRPGQAICSNYSMYGIC 212
K++ + +S P + P RP + C Y G C
Sbjct: 499 KDKFPSTYHPEDKFQSRYHQKEKSSRHHPKKEPALSGELMVYPDRPSEPDCPFYVKTGSC 558
Query: 213 KFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISAT 254
KFG C+F HP P G + P S+ ++ +H A AT
Sbjct: 559 KFGANCKFHHPKDITPNMQGPASPKRSV--AAKEHHAAARAT 598
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 137 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
+ L + LP R C YYM GTC+YG C F+HP++
Sbjct: 329 EAEFLELNRVGLPIREGARKCIYYMRNGTCRYGKKCCFNHPEQ 371
>gi|384250119|gb|EIE23599.1| hypothetical protein COCSUDRAFT_15464 [Coccomyxa subellipsoidea
C-169]
Length = 500
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
+ P RP QP C +Y TG CK+G CKF HP Q + LGLP R G+++C ++
Sbjct: 423 SFPCRPGQPLCDFYTKTGHCKFGEACKFDHPAHFGVQ-----LNSLGLPLRQGESVCGHF 477
Query: 207 SMYGICKFGPTCRFDHP 223
CKFGP C+F HP
Sbjct: 478 EKTHTCKFGPACKFHHP 494
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLP 236
P RPGQ +C Y+ G CKFG C+FDHP + G +N L LP
Sbjct: 424 FPCRPGQPLCDFYTKTGHCKFGEACKFDHPAHFGVQLN-SLGLP 466
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQP 30
+RQ E C ++ +T +CKFG ACKFHHP+P
Sbjct: 467 LRQGESVCGHFEKTHTCKFGPACKFHHPEP 496
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Query: 8 CPYYMRTGSCKFGVACKFHHP-----QPSSLGTALPLTGNASL 45
C +Y +TG CKFG ACKF HP Q +SLG LPL S+
Sbjct: 433 CDFYTKTGHCKFGEACKFDHPAHFGVQLNSLG--LPLRQGESV 473
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
+ +S LP R + C ++ T TCK+G CKFHHP+
Sbjct: 458 VQLNSLGLPLRQGESVCGHFEKTHTCKFGPACKFHHPE 495
>gi|242033337|ref|XP_002464063.1| hypothetical protein SORBIDRAFT_01g011590 [Sorghum bicolor]
gi|241917917|gb|EER91061.1| hypothetical protein SORBIDRAFT_01g011590 [Sorghum bicolor]
Length = 1390
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 90/242 (37%), Gaps = 48/242 (19%)
Query: 4 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP---LTGNASLGSMGSSVLPSSGLQY 60
+ CP+ +R G+C+FG +C+++HP+ T P S P
Sbjct: 1123 ERPECPFLLRFGNCRFGSSCQYYHPKDKVSSTYHPKDKFQSRYHPKEKSSRYHPKKEPAL 1182
Query: 61 AGSLPTWSLQ----RAPYL----SSRLQGT-QSYMPLIVSPSQGIVPAPGWNTYMGNIGP 111
+G L + + P+ S + + + P ++PS GP
Sbjct: 1183 SGELMVYPDRPGEPECPFYVKTGSCKFGANCKFHHPKDIAPSMQ--------------GP 1228
Query: 112 LSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 171
SP +N + A + Q PERP QPDCRYYM G CK+ +
Sbjct: 1229 ASPKRSVAAN-------EHHPAARTTLQDQMYQQQKYPERPGQPDCRYYMQFGKCKFESA 1281
Query: 172 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 231
C F+HPK L S A C Y G C+FG C F HP P
Sbjct: 1282 CIFNHPK---------------LSSGWHLAECPFYMKTGSCQFGSACEFYHPKVRCPSRG 1326
Query: 232 GL 233
G+
Sbjct: 1327 GV 1328
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 25/114 (21%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---------------AASNIGP----- 191
P++P+C + + G C++G+ C+++HPK++++ + +S P
Sbjct: 1122 PERPECPFLLRFGNCRFGSSCQYYHPKDKVSSTYHPKDKFQSRYHPKEKSSRYHPKKEPA 1181
Query: 192 -----LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
+ P RPG+ C Y G CKFG C+F HP P G + P S+
Sbjct: 1182 LSGELMVYPDRPGEPECPFYVKTGSCKFGANCKFHHPKDIAPSMQGPASPKRSV 1235
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 72/188 (38%), Gaps = 65/188 (34%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R + C YYM+ G CKF AC F+HP+ SS
Sbjct: 1261 RPGQPDCRYYMQFGKCKFESACIFNHPKLSS----------------------------- 1291
Query: 62 GSLPTWSLQRAPYL----SSRL-QGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 116
W L P+ S + + Y P + PS+G V
Sbjct: 1292 ----GWHLAECPFYMKTGSCQFGSACEFYHPKVRCPSRGGV------------------- 1328
Query: 117 IAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFH 175
I G++ G A ++L Q + PERP + +C +YM G CK+ +CKFH
Sbjct: 1329 IDGTDY-------GHDFATKSQNVLQQHEQAIYPERPGELECPHYMKHGYCKFQMNCKFH 1381
Query: 176 HPKERIAQ 183
HP++R+ +
Sbjct: 1382 HPRDRLPK 1389
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 52/128 (40%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ--------------------- 183
S+ P+RP + +CR+YM+TG+C YG+ C F+HP+ +
Sbjct: 1023 SEGYPQRPGKLNCRFYMSTGSCSYGSSCHFNHPRLKAKLEVSSFPSEQRNHEVEFLELNR 1082
Query: 184 ----------------------SAASNIGPL------GLPSRPGQAICSNYSMYGICKFG 215
SA S+ GPL G P RP C +G C+FG
Sbjct: 1083 VGLPIREDPDWASASDDSDGCCSADSSDGPLCKQEHGGYPERPE---CPFLLRFGNCRFG 1139
Query: 216 PTCRFDHP 223
+C++ HP
Sbjct: 1140 SSCQYYHP 1147
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ---PSSLGTALP 38
R E CP+Y++TGSCKFG CKFHHP+ PS G A P
Sbjct: 1192 RPGEPECPFYVKTGSCKFGANCKFHHPKDIAPSMQGPASP 1231
Score = 37.4 bits (85), Expect = 8.5, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R + +C +YM TGSC +G +C F+HP+
Sbjct: 1029 RPGKLNCRFYMSTGSCSYGSSCHFNHPR 1056
>gi|414881850|tpg|DAA58981.1| TPA: hypothetical protein ZEAMMB73_531605 [Zea mays]
Length = 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 58/128 (45%), Gaps = 36/128 (28%)
Query: 132 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK------------- 178
LG L A + LP RP +P C +Y TG CK+GA CKF+HPK
Sbjct: 39 LGTRTDNESLIADTTILPVRPSEPVCSFYAKTGKCKFGAVCKFNHPKLEDIKTPSLIAKE 98
Query: 179 --ERIAQSAASNIG------------PL---------GLPSRPGQAICSNYSMYGICKFG 215
R AA++IG P+ GLP RPG+ CS Y G CK+G
Sbjct: 99 TIYRATTDAAAHIGGTDDSVPAKTHAPIAPAEAHNAKGLPIRPGEVDCSFYMKTGSCKYG 158
Query: 216 PTCRFDHP 223
CRF+HP
Sbjct: 159 SICRFNHP 166
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN--------IGPLGLPSRPGQ 200
P+RP + C +YM TG+CKY +CKFHHP +R A + N + GLP R
Sbjct: 222 PQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRREDA 281
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C+ Y G C FG C+FDHP
Sbjct: 282 EACAFYMRSGTCGFGARCKFDHP 304
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 57/254 (22%)
Query: 11 YMRTGSCKFGVACKFHHPQP--SSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSLPTWS 68
Y+ + CKF CKF+HP+ ++LGT T N SL + +++LP + S ++
Sbjct: 15 YLLSSRCKFKSKCKFNHPKEMVNALGTR---TDNESLIA-DTTILPVRPSEPVCSF--YA 68
Query: 69 LQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN 128
+ + + I +PS Y + I G++ ++
Sbjct: 69 KTGKCKFGAVCKFNHPKLEDIKTPSL----IAKETIYRATTD--AAAHIGGTDDSVPAKT 122
Query: 129 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA--- 185
+ A A+ H +++ LP RP + DC +YM TG+CKYG+ C+F+HP + A
Sbjct: 123 HAPI-APAEAH----NAKGLPIRPGEVDCSFYMKTGSCKYGSICRFNHPDRSVVDIAFMA 177
Query: 186 --------------------ASNI---------------GPLGLPSRPGQAICSNYSMYG 210
A+N P+ P RPG+ +C Y G
Sbjct: 178 PVQATLPFPAPIVPAVALNPAANFLQSFDFHATHVPVEPMPMIYPQRPGEIVCDFYMKTG 237
Query: 211 ICKFGPTCRFDHPY 224
CK+ C+F HP+
Sbjct: 238 SCKYAQNCKFHHPF 251
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 21/182 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E C +YM+TGSCK+G C+F+HP S + A A+L + ++P+ L
Sbjct: 139 IRPGEVDCSFYMKTGSCKYGSICRFNHPDRSVVDIAFMAPVQATL-PFPAPIVPAVALNP 197
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPA-----PGWNTYMGNIGPLSPT 115
A + LQ + ++ + MP+I G + G Y N P
Sbjct: 198 AANF----LQSFDFHATHVPVEP--MPMIYPQRPGEIVCDFYMKTGSCKYAQNCKFHHPF 251
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+ +S N+ ++ + LP R D C +YM +GTC +GA CKF
Sbjct: 252 DRSAP---HSKENED------TQQPVALTLAGLPRREDAEACAFYMRSGTCGFGARCKFD 302
Query: 176 HP 177
HP
Sbjct: 303 HP 304
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 35
+R E C +Y +TG CKFG CKF+HP+ + T
Sbjct: 57 VRPSEPVCSFYAKTGKCKFGAVCKFNHPKLEDIKT 91
>gi|293335701|ref|NP_001169053.1| uncharacterized protein LOC100382893 [Zea mays]
gi|223974689|gb|ACN31532.1| unknown [Zea mays]
Length = 462
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 58/128 (45%), Gaps = 36/128 (28%)
Query: 132 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK------------- 178
LG L A + LP RP +P C +Y TG CK+GA CKF+HPK
Sbjct: 191 LGTRTDNESLIADTTILPVRPSEPVCSFYAKTGKCKFGAVCKFNHPKLEDIKTPSLIAKE 250
Query: 179 --ERIAQSAASNIG------------PL---------GLPSRPGQAICSNYSMYGICKFG 215
R AA++IG P+ GLP RPG+ CS Y G CK+G
Sbjct: 251 TIYRATTDAAAHIGGTDDSVPAKTHAPIAPAEAHNAKGLPIRPGEVDCSFYMKTGSCKYG 310
Query: 216 PTCRFDHP 223
CRF+HP
Sbjct: 311 SICRFNHP 318
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN--------IGPLGLPSRPGQ 200
P+RP + C +YM TG+CKY +CKFHHP +R A + N + GLP R
Sbjct: 374 PQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRREDA 433
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C+ Y G C FG C+FDHP
Sbjct: 434 EACAFYMRSGTCGFGARCKFDHP 456
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 108/263 (41%), Gaps = 58/263 (22%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQP--SSLGTALPLTGNASLGSMGSSVLPSSGLQ 59
R E CPY + + CKF CKF+HP+ ++LGT T N SL + +++LP +
Sbjct: 159 RPGEPDCPYLL-SSRCKFKSKCKFNHPKEMVNALGTR---TDNESLIA-DTTILPVRPSE 213
Query: 60 YAGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAG 119
S ++ + + + I +PS Y + I G
Sbjct: 214 PVCSF--YAKTGKCKFGAVCKFNHPKLEDIKTPSL----IAKETIYRATTD--AAAHIGG 265
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
++ ++ + A A+ H +++ LP RP + DC +YM TG+CKYG+ C+F+HP
Sbjct: 266 TDDSVPAKTHAPI-APAEAH----NAKGLPIRPGEVDCSFYMKTGSCKYGSICRFNHPDR 320
Query: 180 RIAQSA-----------------------ASNI---------------GPLGLPSRPGQA 201
+ A A+N P+ P RPG+
Sbjct: 321 SVVDIAFMAPVQATLPFPAPIVPAVALNPAANFLQSFDFHATHVPVEPMPMIYPQRPGEI 380
Query: 202 ICSNYSMYGICKFGPTCRFDHPY 224
+C Y G CK+ C+F HP+
Sbjct: 381 VCDFYMKTGSCKYAQNCKFHHPF 403
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ--SAASNIGPLG----LPSRPGQAI 202
PERP +PDC Y +++ CK+ + CKF+HPKE + + N + LP RP + +
Sbjct: 157 PERPGEPDCPYLLSS-RCKFKSKCKFNHPKEMVNALGTRTDNESLIADTTILPVRPSEPV 215
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
CS Y+ G CKFG C+F+HP
Sbjct: 216 CSFYAKTGKCKFGAVCKFNHP 236
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 115 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 174
+++ S +YSS A+ L +S P+RP Q DC +YM+TGTCKYG CKF
Sbjct: 79 STVGQSETLYSSITM------AKRPRLESSLPIYPQRPGQKDCAFYMSTGTCKYGETCKF 132
Query: 175 HHPKERIAQSAASNIGPL-----GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
HP + + + N + P RPG+ C Y + CKF C+F+HP
Sbjct: 133 DHP-QWVPEGGVPNWKEVLNDEDYYPERPGEPDCP-YLLSSRCKFKSKCKFNHP 184
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 21/182 (11%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E C +YM+TGSCK+G C+F+HP S + A A+L + ++P+ L
Sbjct: 291 IRPGEVDCSFYMKTGSCKYGSICRFNHPDRSVVDIAFMAPVQATL-PFPAPIVPAVALNP 349
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPA-----PGWNTYMGNIGPLSPT 115
A + LQ + ++ + MP+I G + G Y N P
Sbjct: 350 AANF----LQSFDFHATHVPVEP--MPMIYPQRPGEIVCDFYMKTGSCKYAQNCKFHHPF 403
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+ +S N+ ++ + LP R D C +YM +GTC +GA CKF
Sbjct: 404 DRSAP---HSKENED------TQQPVALTLAGLPRREDAEACAFYMRSGTCGFGARCKFD 454
Query: 176 HP 177
HP
Sbjct: 455 HP 456
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 35
+R E C +Y +TG CKFG CKF+HP+ + T
Sbjct: 209 VRPSEPVCSFYAKTGKCKFGAVCKFNHPKLEDIKT 243
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R +K C +YM TG+CK+G CKF HPQ
Sbjct: 109 RPGQKDCAFYMSTGTCKYGETCKFDHPQ 136
>gi|219363609|ref|NP_001136594.1| uncharacterized protein LOC100216717 [Zea mays]
gi|194696306|gb|ACF82237.1| unknown [Zea mays]
gi|413950616|gb|AFW83265.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 165
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP------LGLPSRPGQAI 202
P+RP + C +YM TG+CKY CKFHHP R A + N P LP R
Sbjct: 56 PQRPGETVCDFYMKTGSCKYSQKCKFHHPISRFAPHSKENGDPQQPATLASLPRREDAEA 115
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C+ Y G+C+FG C+FDHP
Sbjct: 116 CAFYMRSGMCRFGAHCKFDHP 136
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 71/191 (37%), Gaps = 46/191 (24%)
Query: 12 MRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSLPTWSLQR 71
M+TGSCK+G C+F+HP P A + + + LPSS
Sbjct: 1 MKTGSCKYGSICRFNHPDRPG-----PAADIAFMVPLVQATLPSS--------------- 40
Query: 72 APYLSSRLQGTQSYMPLIVSPSQGIVPA-PGWNT--YMGNIGPLSPTSIAG-----SNLI 123
AP + P +V P I P PG + G + S
Sbjct: 41 APIV-----------PAVVEPLPMIYPQRPGETVCDFYMKTGSCKYSQKCKFHHPISRFA 89
Query: 124 YSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 183
S+ GD A + +LP R D C +YM +G C++GA CKF HP A
Sbjct: 90 PHSKENGDPQQPATL-------ASLPRREDAEACAFYMRSGMCRFGAHCKFDHPPREEAI 142
Query: 184 SAASNIGPLGL 194
S G G+
Sbjct: 143 SELQAAGKEGI 153
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 21/88 (23%)
Query: 161 MNTGTCKYGADCKFHHPKER-----------IAQS----------AASNIGPLGLPSRPG 199
M TG+CKYG+ C+F+HP + Q+ A P+ P RPG
Sbjct: 1 MKTGSCKYGSICRFNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPG 60
Query: 200 QAICSNYSMYGICKFGPTCRFDHPYAGY 227
+ +C Y G CK+ C+F HP + +
Sbjct: 61 ETVCDFYMKTGSCKYSQKCKFHHPISRF 88
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASL 45
R+D ++C +YMR+G C+FG CKF HP + L G +
Sbjct: 110 REDAEACAFYMRSGMCRFGAHCKFDHPPREEAISELQAAGKEGI 153
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C +YM+TGSCK+ CKFHHP
Sbjct: 58 RPGETVCDFYMKTGSCKYSQKCKFHHP 84
>gi|302143643|emb|CBI22396.3| unnamed protein product [Vitis vinifera]
Length = 134
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
ER QPDC YY+ T TCKYG+ CK+HH ++R+ S + +GL R + CS Y
Sbjct: 19 EFLERIGQPDCGYYLKTRTCKYGSICKYHHSRDRLDAGPVS-LNIVGLSMRQEEKPCSYY 77
Query: 207 SMYGICKFGPTCRFDH 222
G+CKFG C+F H
Sbjct: 78 MRTGLCKFGVACKFHH 93
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 32/39 (82%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPL 39
MRQ+EK C YYMRTG CKFGVACKFHH QP+S+GT +
Sbjct: 67 MRQEEKPCSYYMRTGLCKFGVACKFHHLQPASIGTGYRM 105
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 126 SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
SR++ D G +S + L R ++ C YYM TG CK+G CKFHH
Sbjct: 49 SRDRLDAGP------VSLNIVGLSMRQEEKPCSYYMRTGLCKFGVACKFHH 93
>gi|388519213|gb|AFK47668.1| unknown [Medicago truncatula]
Length = 455
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 15/107 (14%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E+ CPYYMRTGSCKFG C+F+HP P+++G + P +G + GS+
Sbjct: 326 IRLGERECPYYMRTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSV------------ 373
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVP-APGWNTYM 106
SL S Q SSR + PL+ +P+QG+ P WN Y
Sbjct: 374 --SLRGVSQQPVASWSSRKLNETPFAPLMPTPTQGLAPQTSDWNGYQ 418
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGLPSR-P 198
S + P RP+ DC +YM TG+CK+G +CKF+HP R Q+ A + P
Sbjct: 225 SDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENA 284
Query: 199 GQAICSNYSMYGICKFGPTCRFDHP-----------YAGYPINYG 232
GQ C Y G CKFG C+++H + G PI G
Sbjct: 285 GQTECKYYQRSGGCKFGKACKYNHSRGFTAPISELNFLGLPIRLG 329
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + + C +YM+TGSCKFG CKF+HP
Sbjct: 233 LRPEAEDCSFYMKTGSCKFGFNCKFNHP 260
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP R + +C YYM TG+CK+G++C+F+HP
Sbjct: 324 LPIRLGERECPYYMRTGSCKFGSNCRFNHP 353
>gi|357128272|ref|XP_003565798.1| PREDICTED: uncharacterized protein LOC100842536, partial
[Brachypodium distachyon]
Length = 1451
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 62/234 (26%), Positives = 92/234 (39%), Gaps = 37/234 (15%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R E CP+YM+ CKFG C F HP+ + T P S+ GS S+ +
Sbjct: 1229 RPGEPECPFYMKNRYCKFGAHCNFDHPKDLNPTTYSPTNEKKSVA--GSDHHASTRITLK 1286
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSY----------MPLIVSPSQGIVPAPGWNTYMGNIGP 111
P Q+ Y Q Y I + +P+ GW+
Sbjct: 1287 DPAP----QQQQYPERPGQPDCRYYMQFGKCKYLFACIFHHPKDRLPS-GWH-------- 1333
Query: 112 LSPTSIAGSNL--IYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 169
P+ A S+ + N + Q + A +PE C +YM TG C++G
Sbjct: 1334 --PSDPAQSDQYDTWQPTNASRIENFCQQEQIGAEIHGMPE------CPFYMKTGKCQFG 1385
Query: 170 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ C+F H K+ + + P RPG+ CS+Y +G C F C+F HP
Sbjct: 1386 SACEFRHLKDTRSTTEVEEHAMY--PERPGEPECSHYMKHGYCNFQMNCKFHHP 1437
Score = 70.9 bits (172), Expect = 8e-10, Method: Composition-based stats.
Identities = 69/249 (27%), Positives = 88/249 (35%), Gaps = 62/249 (24%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ---PSSLGTALPLTGNASLGSMGSSVLPSSGL 58
R ++ CP+ R G CKF CK+ H + PS P S G V+
Sbjct: 1178 RPHKRECPFIKRFGDCKFESLCKYQHSKDRYPSRYHRKDP--------SQGGEVVEYPTR 1229
Query: 59 QYAGSLPTWSLQRAPYLSSR--LQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTS 116
P + R + + P SP+ S
Sbjct: 1230 PGEPECPFYMKNRYCKFGAHCNFDHPKDLNPTTYSPTN------------------EKKS 1271
Query: 117 IAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 176
+AGS+ S+R + + Q PERP QPDCRYYM G CKY C FHH
Sbjct: 1272 VAGSDHHASTR--------ITLKDPAPQQQQYPERPGQPDCRYYMQFGKCKYLFACIFHH 1323
Query: 177 PKERI---------AQS---------AASNIGPLGLPSRPGQAI-----CSNYSMYGICK 213
PK+R+ AQS AS I + G I C Y G C+
Sbjct: 1324 PKDRLPSGWHPSDPAQSDQYDTWQPTNASRIENFCQQEQIGAEIHGMPECPFYMKTGKCQ 1383
Query: 214 FGPTCRFDH 222
FG C F H
Sbjct: 1384 FGSACEFRH 1392
Score = 60.8 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS---------------NIGP 191
N P+RP + +C YM+ G+C G C F+HP + A+ S +
Sbjct: 907 NYPQRPGKLNCPSYMSKGSCSNGLSCHFNHPSVKTAKPDVSWFPSEQDNHGVAEILELNR 966
Query: 192 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+GLP R G C Y G C++G C F+HP
Sbjct: 967 VGLPIREGARNCVYYMRNGACRYGKRCHFNHP 998
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 23/114 (20%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKE-------------RIAQSAASNIGPLGL- 194
P RP +P+C +YM CK+GA C F HPK+ +A S + L
Sbjct: 1227 PTRPGEPECPFYMKNRYCKFGAHCNFDHPKDLNPTTYSPTNEKKSVAGSDHHASTRITLK 1286
Query: 195 ---------PSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 239
P RPGQ C Y +G CK+ C F HP P + S P S
Sbjct: 1287 DPAPQQQQYPERPGQPDCRYYMQFGKCKYLFACIFHHPKDRLPSGWHPSDPAQS 1340
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 36/182 (19%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R + C YYM+ G CK+ AC FHHP+ LP + S P+ QY
Sbjct: 1298 RPGQPDCRYYMQFGKCKYLFACIFHHPKDR-----LPSGWHPSD--------PAQSDQY- 1343
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
TW A + + Q Q I + G+ P + G S
Sbjct: 1344 ---DTWQPTNASRIENFCQQEQ-----IGAEIHGMPECP----FYMKTGKCQFGSACEFR 1391
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 181
+ +R+ ++ A PERP +P+C +YM G C + +CKFHHP +R+
Sbjct: 1392 HLKDTRSTTEVEEHAMY----------PERPGEPECSHYMKHGYCNFQMNCKFHHPGDRL 1441
Query: 182 AQ 183
+
Sbjct: 1442 CK 1443
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-----LPSRPGQAICS 204
ERP + +C + G CK+ + CK+ H K+R G P+RPG+ C
Sbjct: 1177 ERPHKRECPFIKRFGDCKFESLCKYQHSKDRYPSRYHRKDPSQGGEVVEYPTRPGEPECP 1236
Query: 205 NYSMYGICKFGPTCRFDHPYAGYPINY 231
Y CKFG C FDHP P Y
Sbjct: 1237 FYMKNRYCKFGAHCNFDHPKDLNPTTY 1263
Score = 42.4 bits (98), Expect = 0.28, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 140 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 190
IL + LP R +C YYM G C+YG C F+HP+ I +S G
Sbjct: 961 ILELNRVGLPIREGARNCVYYMRNGACRYGKRCHFNHPEHVIDAHFSSPTG 1011
Score = 40.8 bits (94), Expect = 0.85, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
+R+ ++C YYMR G+C++G C F+HP+
Sbjct: 971 IREGARNCVYYMRNGACRYGKRCHFNHPE 999
>gi|223993851|ref|XP_002286609.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977924|gb|EED96250.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 622
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS--NIGPLGLPSRPGQAICSNY 206
P+R +PDCR Y+ TG CKYG CK++HP + N G P RP + C +
Sbjct: 9 PQRSGEPDCRDYLRTGRCKYGESCKYNHPPNVESGGGVKPLNPGEPMFPIRPTEPPCQYF 68
Query: 207 SMYGICKFGPTCRFDHPYAG 226
+G CKFG +C+F+HP G
Sbjct: 69 LKHGTCKFGQSCKFNHPAGG 88
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 61/183 (33%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+R E C Y+++ G+CKFG +CKF+HP + + + + G G+
Sbjct: 58 IRPTEPPCQYFLKHGTCKFGQSCKFNHPAGGVVDSHVAVGGEGCGGT------------- 104
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGS 120
A LP G+V ++ +P+ S
Sbjct: 105 ANGLPA----------------------------GLV-------FLTTTNNSTPSYTVDS 129
Query: 121 NLIYSSRNQGDLGAGAQMHILSASS------QNLPERPDQPDCRYYMNTGTCKYGADCKF 174
N ++ +G+ H+ S + Q LP+RP +P+C Y++ G CKYGA CKF
Sbjct: 130 NGVFRQ-------SGSDAHVSSLMAAASSSVQVLPQRPTEPNCIYFLRNGRCKYGATCKF 182
Query: 175 HHP 177
HHP
Sbjct: 183 HHP 185
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 54/130 (41%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS----------AASNIGPLGL--- 194
P RP +P C+Y++ GTCK+G CKF+HP + S +N P GL
Sbjct: 56 FPIRPTEPPCQYFLKHGTCKFGQSCKFNHPAGGVVDSHVAVGGEGCGGTANGLPAGLVFL 115
Query: 195 -----------------------------------------PSRPGQAICSNYSMYGICK 213
P RP + C + G CK
Sbjct: 116 TTTNNSTPSYTVDSNGVFRQSGSDAHVSSLMAAASSSVQVLPQRPTEPNCIYFLRNGRCK 175
Query: 214 FGPTCRFDHP 223
+G TC+F HP
Sbjct: 176 YGATCKFHHP 185
>gi|414881849|tpg|DAA58980.1| TPA: hypothetical protein ZEAMMB73_531605 [Zea mays]
Length = 94
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN--------IGPLGLPSRPGQ 200
P+RP + C +YM TG+CKY +CKFHHP +R A + N + GLP R
Sbjct: 6 PQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRREDA 65
Query: 201 AICSNYSMYGICKFGPTCRFDHP 223
C+ Y G C FG C+FDHP
Sbjct: 66 EACAFYMRSGTCGFGARCKFDHP 88
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R+D ++C +YMR+G+C FG CKF HP
Sbjct: 62 REDAEACAFYMRSGTCGFGARCKFDHP 88
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
LP R D C +YM +GTC +GA CKF HP
Sbjct: 59 LPRREDAEACAFYMRSGTCGFGARCKFDHP 88
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C +YM+TGSCK+ CKFHHP
Sbjct: 8 RPGEIVCDFYMKTGSCKYAQNCKFHHP 34
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 191 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
P+ P RPG+ +C Y G CK+ C+F HP+
Sbjct: 2 PMIYPQRPGEIVCDFYMKTGSCKYAQNCKFHHPF 35
>gi|159486531|ref|XP_001701292.1| key regulator in ER unfolded protein response [Chlamydomonas
reinhardtii]
gi|158271775|gb|EDO97587.1| key regulator in ER unfolded protein response [Chlamydomonas
reinhardtii]
Length = 1573
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
+ P RP + C +Y+ TG CK+ C F HP E + A LGLP RP + +C+
Sbjct: 1478 REFPRRPGKQLCDFYVKTGHCKFADTCVFDHPVEHAVRLTA-----LGLPLRPAEPVCTF 1532
Query: 206 YSMYGICKFGPTCRFDHP 223
Y C FGP C+F+HP
Sbjct: 1533 YLKNNECGFGPACKFNHP 1550
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 139 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
H + ++ LP RP +P C +Y+ C +G CKF+HP R
Sbjct: 1512 HAVRLTALGLPLRPAEPVCTFYLKNNECGFGPACKFNHPMLR 1553
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R E C +Y++ C FG ACKF+HP
Sbjct: 1523 LRPAEPVCTFYLKNNECGFGPACKFNHP 1550
>gi|413950621|gb|AFW83270.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 167
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPL-----GLPSRPGQAI 202
PERP +PDC Y +N CK+ + CKF+HPK+ + A +N L LP RP + I
Sbjct: 18 PERPGEPDCPYLLN-NRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C Y+ G CKFG C+F+HP
Sbjct: 77 CVFYAKTGKCKFGAICKFNHP 97
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 132 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE------------ 179
LG G L A S LP RP +P C +Y TG CK+GA CKF+HPK+
Sbjct: 52 LGTGTNNESLIADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETI 111
Query: 180 -----RIAQSAASNIGPLGLPSRPGQAICSNY 206
A + GLP R G+ CS Y
Sbjct: 112 YTATTDAADAPTEACNAKGLPIRQGEVDCSFY 143
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
+R E C +Y +TG CKFG CKF+HP+
Sbjct: 70 VRPSEPICVFYAKTGKCKFGAICKFNHPK 98
>gi|309256993|gb|ADO62624.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 71.2 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENDGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 218 CRF 220
C+F
Sbjct: 61 CKF 63
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS + LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENDGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 41.6 bits (96), Expect = 0.49, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R E C +YM+TG CKFG+ CKFH
Sbjct: 40 RPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|309257037|gb|ADO62646.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMRTGKCKFGLT 60
Query: 218 CRF 220
C+F
Sbjct: 61 CKF 63
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMRTGKCKFGLTCKFH 64
Score = 42.7 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 18/25 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R E C +YMRTG CKFG+ CKFH
Sbjct: 40 RPSEPQCAFYMRTGKCKFGLTCKFH 64
>gi|309256901|gb|ADO62578.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256903|gb|ADO62579.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256905|gb|ADO62580.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256907|gb|ADO62581.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256909|gb|ADO62582.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256911|gb|ADO62583.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256913|gb|ADO62584.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256915|gb|ADO62585.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256917|gb|ADO62586.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256919|gb|ADO62587.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256925|gb|ADO62590.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256927|gb|ADO62591.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256929|gb|ADO62592.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256931|gb|ADO62593.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256933|gb|ADO62594.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256935|gb|ADO62595.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256937|gb|ADO62596.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256939|gb|ADO62597.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256941|gb|ADO62598.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256943|gb|ADO62599.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256945|gb|ADO62600.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256947|gb|ADO62601.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256949|gb|ADO62602.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256951|gb|ADO62603.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256953|gb|ADO62604.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256955|gb|ADO62605.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256957|gb|ADO62606.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256959|gb|ADO62607.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256961|gb|ADO62608.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256963|gb|ADO62609.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256965|gb|ADO62610.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256967|gb|ADO62611.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256969|gb|ADO62612.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256971|gb|ADO62613.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256973|gb|ADO62614.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256975|gb|ADO62615.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256977|gb|ADO62616.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256979|gb|ADO62617.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256981|gb|ADO62618.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256983|gb|ADO62619.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256985|gb|ADO62620.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256987|gb|ADO62621.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256995|gb|ADO62625.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256997|gb|ADO62626.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256999|gb|ADO62627.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257001|gb|ADO62628.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257003|gb|ADO62629.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257005|gb|ADO62630.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257007|gb|ADO62631.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257009|gb|ADO62632.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257011|gb|ADO62633.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257013|gb|ADO62634.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257015|gb|ADO62635.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257017|gb|ADO62636.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257019|gb|ADO62637.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257021|gb|ADO62638.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257023|gb|ADO62639.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257025|gb|ADO62640.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257029|gb|ADO62642.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257033|gb|ADO62644.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257039|gb|ADO62647.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257041|gb|ADO62648.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257043|gb|ADO62649.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257045|gb|ADO62650.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257047|gb|ADO62651.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257049|gb|ADO62652.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257051|gb|ADO62653.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257053|gb|ADO62654.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257055|gb|ADO62655.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257057|gb|ADO62656.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257059|gb|ADO62657.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257061|gb|ADO62658.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257063|gb|ADO62659.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257069|gb|ADO62662.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257073|gb|ADO62664.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257075|gb|ADO62665.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257077|gb|ADO62666.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257079|gb|ADO62667.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257081|gb|ADO62668.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257083|gb|ADO62669.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257085|gb|ADO62670.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257087|gb|ADO62671.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257089|gb|ADO62672.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257091|gb|ADO62673.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257097|gb|ADO62676.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257101|gb|ADO62678.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257103|gb|ADO62679.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257109|gb|ADO62682.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257113|gb|ADO62684.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257115|gb|ADO62685.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257125|gb|ADO62690.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257127|gb|ADO62691.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257129|gb|ADO62692.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257131|gb|ADO62693.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257133|gb|ADO62694.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257135|gb|ADO62695.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257137|gb|ADO62696.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257139|gb|ADO62697.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257141|gb|ADO62698.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257143|gb|ADO62699.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257145|gb|ADO62700.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257147|gb|ADO62701.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257149|gb|ADO62702.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257151|gb|ADO62703.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257153|gb|ADO62704.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257157|gb|ADO62706.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257159|gb|ADO62707.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257161|gb|ADO62708.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257163|gb|ADO62709.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|328693109|gb|AEB38166.1| HUA1 [Helianthus exilis]
Length = 64
Score = 70.9 bits (172), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 218 CRF 220
C+F
Sbjct: 61 CKF 63
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 41.2 bits (95), Expect = 0.56, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R E C +YM+TG CKFG+ CKFH
Sbjct: 40 RPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|295913268|gb|ADG57891.1| transcription factor [Lycoris longituba]
Length = 73
Score = 70.9 bits (172), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
+C+YY+ G C +G CKFHHP ++ + + LG P RP + C+ Y G CKFG
Sbjct: 4 ECQYYLKMGICXFGPTCKFHHPVDKAGIAGRVQLNILGYPLRPSEKECAYYLRTGQCKFG 63
Query: 216 PTCRFDHP 223
TC+F HP
Sbjct: 64 STCKFHHP 71
Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQP 30
+R EK C YY+RTG CKFG CKFHHPQP
Sbjct: 44 LRPSEKECAYYLRTGQCKFGSTCKFHHPQP 73
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
P RP + +C YY+ TG CK+G+ CKFHHP+
Sbjct: 43 PLRPSEKECAYYLRTGQCKFGSTCKFHHPQ 72
Score = 37.4 bits (85), Expect = 8.0, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS 55
C YY++ G C FG CKFHHP + + G L +G + PS
Sbjct: 5 CQYYLKMGICXFGPTCKFHHPVDKA-----GIAGRVQLNILGYPLRPS 47
>gi|413950618|gb|AFW83267.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 156
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPL-----GLPSRPGQAI 202
PERP +PDC Y +N CK+ + CKF+HPK+ + A +N L LP RP + I
Sbjct: 18 PERPGEPDCPYLLN-NRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C Y+ G CKFG C+F+HP
Sbjct: 77 CVFYAKTGKCKFGAICKFNHP 97
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 17/96 (17%)
Query: 132 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE------------ 179
LG G L A S LP RP +P C +Y TG CK+GA CKF+HPK+
Sbjct: 52 LGTGTNNESLIADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETI 111
Query: 180 -----RIAQSAASNIGPLGLPSRPGQAICSNYSMYG 210
A + GLP R G+ CS Y G
Sbjct: 112 YTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTG 147
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
+R E C +Y +TG CKFG CKF+HP+
Sbjct: 70 VRPSEPICVFYAKTGKCKFGAICKFNHPK 98
>gi|328693057|gb|AEB38140.1| HUA1 [Helianthus petiolaris]
gi|328693059|gb|AEB38141.1| HUA1 [Helianthus petiolaris]
Length = 64
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
+++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 218 CRF 220
C+F
Sbjct: 61 CKF 63
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 41.6 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R E C +YM+TG CKFG+ CKFH
Sbjct: 40 RPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|328693111|gb|AEB38167.1| HUA1 [Helianthus exilis]
Length = 64
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQSAAS-NIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA AS N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLFASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 218 CRF 220
C+F
Sbjct: 61 CKF 63
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
L AS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LFASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R E C +YM+TG CKFG+ CKFH
Sbjct: 40 RPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|295913132|gb|ADG57827.1| transcription factor [Lycoris longituba]
Length = 206
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 60
+RQ EK CPYY++TG CKFG ACKFHHP+P S + ++++ M L S QY
Sbjct: 75 LRQGEKECPYYVKTGQCKFGSACKFHHPEPVSSFFS---PPSSAVNPMVQPPLVPSPQQY 131
Query: 61 AGSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTY 105
SL +W + R P +S Y P+ +S S IVP PGW+ Y
Sbjct: 132 P-SLASWQVGR-PSISPTTYMPGPYGPVYISSS--IVPVPGWSPY 172
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 131 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 190
D G ++ SAS PE QP C+ ++ TG C++G+ C+++HP++ + S + N
Sbjct: 15 DRGVVSKAPRFSASDH--PEHASQPVCQNFLKTGACRFGSTCRYYHPRQ-VGGSVSLNY- 70
Query: 191 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G P R G+ C Y G CKFG C+F HP
Sbjct: 71 -HGYPLRQGEKECPYYVKTGQCKFGSACKFHHP 102
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 168 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---- 223
YG C+++HP++R S A P Q +C N+ G C+FG TCR+ HP
Sbjct: 4 YGVRCRYNHPRDRGVVSKAPRFSASDHPEHASQPVCQNFLKTGACRFGSTCRYYHPRQVG 63
Query: 224 ------YAGYPINYG 232
Y GYP+ G
Sbjct: 64 GSVSLNYHGYPLRQG 78
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
+S + P R + +C YY+ TG CK+G+ CKFHHP+
Sbjct: 66 VSLNYHGYPLRQGEKECPYYVKTGQCKFGSACKFHHPE 103
>gi|328693041|gb|AEB38132.1| HUA1 [Helianthus petiolaris]
gi|328693045|gb|AEB38134.1| HUA1 [Helianthus petiolaris]
gi|328693065|gb|AEB38144.1| HUA1 [Helianthus paradoxus]
gi|328693067|gb|AEB38145.1| HUA1 [Helianthus paradoxus]
gi|328693069|gb|AEB38146.1| HUA1 [Helianthus paradoxus]
gi|328693075|gb|AEB38149.1| HUA1 [Helianthus paradoxus]
gi|328693079|gb|AEB38151.1| HUA1 [Helianthus paradoxus]
gi|328693085|gb|AEB38154.1| HUA1 [Helianthus paradoxus]
gi|328693087|gb|AEB38155.1| HUA1 [Helianthus paradoxus]
gi|328693089|gb|AEB38156.1| HUA1 [Helianthus exilis]
gi|328693091|gb|AEB38157.1| HUA1 [Helianthus exilis]
gi|328693093|gb|AEB38158.1| HUA1 [Helianthus exilis]
gi|328693095|gb|AEB38159.1| HUA1 [Helianthus exilis]
gi|328693101|gb|AEB38162.1| HUA1 [Helianthus exilis]
gi|328693103|gb|AEB38163.1| HUA1 [Helianthus exilis]
gi|328693105|gb|AEB38164.1| HUA1 [Helianthus exilis]
gi|328693107|gb|AEB38165.1| HUA1 [Helianthus exilis]
Length = 65
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 218 CRF 220
C+F
Sbjct: 62 CKF 64
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 40.8 bits (94), Expect = 0.93, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R E C +YM+TG CKFG+ CKFH
Sbjct: 41 RPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|328693049|gb|AEB38136.1| HUA1 [Helianthus petiolaris]
gi|328693051|gb|AEB38137.1| HUA1 [Helianthus petiolaris]
gi|328693053|gb|AEB38138.1| HUA1 [Helianthus petiolaris]
gi|328693055|gb|AEB38139.1| HUA1 [Helianthus petiolaris]
gi|328693061|gb|AEB38142.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
+++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 218 CRF 220
C+F
Sbjct: 62 CKF 64
Score = 51.2 bits (121), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 40.8 bits (94), Expect = 0.74, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R E C +YM+TG CKFG+ CKFH
Sbjct: 41 RPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|302853185|ref|XP_002958109.1| hypothetical protein VOLCADRAFT_107956 [Volvox carteri f.
nagariensis]
gi|300256577|gb|EFJ40840.1| hypothetical protein VOLCADRAFT_107956 [Volvox carteri f.
nagariensis]
Length = 1304
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
+ P RP + C +Y+ TG CK+G C F HP + A + LGLP RP + IC+
Sbjct: 1181 REFPRRPGKQLCDFYVKTGHCKFGESCVFDHP-----ELYAVRLTALGLPLRPEEQICTF 1235
Query: 206 YSMYGICKFGPTCRFDHP 223
Y C+FGP C+F HP
Sbjct: 1236 YLKNNECRFGPACKFHHP 1253
Score = 42.4 bits (98), Expect = 0.25, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 137 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
+++ + ++ LP RP++ C +Y+ C++G CKFHHP R
Sbjct: 1213 ELYAVRLTALGLPLRPEEQICTFYLKNNECRFGPACKFHHPPLR 1256
Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R +E+ C +Y++ C+FG ACKFHHP
Sbjct: 1226 LRPEEQICTFYLKNNECRFGPACKFHHP 1253
>gi|328693071|gb|AEB38147.1| HUA1 [Helianthus paradoxus]
gi|328693073|gb|AEB38148.1| HUA1 [Helianthus paradoxus]
gi|328693077|gb|AEB38150.1| HUA1 [Helianthus paradoxus]
Length = 65
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSDPQCAFYMKTGKCKFGLT 61
Query: 218 CRF 220
C+F
Sbjct: 62 CKF 64
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSDPQCAFYMKTGKCKFGLTCKFH 65
Score = 39.3 bits (90), Expect = 2.4, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R + C +YM+TG CKFG+ CKFH
Sbjct: 41 RPSDPQCAFYMKTGKCKFGLTCKFH 65
>gi|302832796|ref|XP_002947962.1| hypothetical protein VOLCADRAFT_103744 [Volvox carteri f.
nagariensis]
gi|300266764|gb|EFJ50950.1| hypothetical protein VOLCADRAFT_103744 [Volvox carteri f.
nagariensis]
Length = 315
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C +++ TGTC YG CKF HP +R + G P R + C++Y G C FGP
Sbjct: 124 CTFFIRTGTCAYGDRCKFKHPLDR----PPPQLNTRGYPIRADEPDCAHYLKKGWCAFGP 179
Query: 217 TCRFDHPYAGYPI--NYGLSLPPLSIL 241
TC+F+HP I +YGLS PP + +
Sbjct: 180 TCKFNHPEMQPSILNSYGLSQPPTAYV 206
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
+++ P R D+PDC +Y+ G C +G CKF+HP+
Sbjct: 153 NTRGYPIRADEPDCAHYLKKGWCAFGPTCKFNHPE 187
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP--QPSSL---GTALPLTGNASL 45
+R DE C +Y++ G C FG CKF+HP QPS L G + P T SL
Sbjct: 159 IRADEPDCAHYLKKGWCAFGPTCKFNHPEMQPSILNSYGLSQPPTAYVSL 208
>gi|328693113|gb|AEB38168.1| HUA1 [Helianthus tuberosus]
gi|328693115|gb|AEB38169.1| HUA1 [Helianthus tuberosus]
gi|328693117|gb|AEB38170.1| HUA1 [Helianthus tuberosus]
gi|328693119|gb|AEB38171.1| HUA1 [Helianthus tuberosus]
gi|328693121|gb|AEB38172.1| HUA1 [Helianthus tuberosus]
gi|328693123|gb|AEB38173.1| HUA1 [Helianthus tuberosus]
gi|328693125|gb|AEB38174.1| HUA1 [Helianthus tuberosus]
gi|328693127|gb|AEB38175.1| HUA1 [Helianthus tuberosus]
gi|328693131|gb|AEB38177.1| HUA1 [Helianthus tuberosus]
gi|328693133|gb|AEB38178.1| HUA1 [Helianthus tuberosus]
gi|328693135|gb|AEB38179.1| HUA1 [Helianthus tuberosus]
gi|328693137|gb|AEB38180.1| HUA1 [Helianthus tuberosus]
gi|328693139|gb|AEB38181.1| HUA1 [Helianthus tuberosus]
gi|328693141|gb|AEB38182.1| HUA1 [Helianthus tuberosus]
gi|328693143|gb|AEB38183.1| HUA1 [Helianthus tuberosus]
gi|328693145|gb|AEB38184.1| HUA1 [Helianthus tuberosus]
gi|328693147|gb|AEB38185.1| HUA1 [Helianthus tuberosus]
gi|328693149|gb|AEB38186.1| HUA1 [Helianthus tuberosus]
gi|328693151|gb|AEB38187.1| HUA1 [Helianthus tuberosus]
gi|328693153|gb|AEB38188.1| HUA1 [Helianthus tuberosus]
gi|328693157|gb|AEB38190.1| HUA1 [Helianthus tuberosus]
gi|328693159|gb|AEB38191.1| HUA1 [Helianthus tuberosus]
Length = 65
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T +CK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLSCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 218 CRF 220
C+F
Sbjct: 62 CKF 64
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R E C +YM+TG CKFG+ CKFH
Sbjct: 41 RPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|309257027|gb|ADO62641.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPRCAFYMKTGKCKFGLT 60
Query: 218 CRF 220
C+F
Sbjct: 61 CKF 63
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPE P +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLVLPESPSEPRCAFYMKTGKCKFGLTCKFH 64
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 5 EKSCPYYMRTGSCKFGVACKFH 26
E C +YM+TG CKFG+ CKFH
Sbjct: 43 EPRCAFYMKTGKCKFGLTCKFH 64
>gi|309257031|gb|ADO62643.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFYMKTGKCKFGLT 60
Query: 218 CRF 220
C+F
Sbjct: 61 CKF 63
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPE P +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPESPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 5 EKSCPYYMRTGSCKFGVACKFH 26
E C +YM+TG CKFG+ CKFH
Sbjct: 43 EPQCAFYMKTGKCKFGLTCKFH 64
>gi|328693129|gb|AEB38176.1| HUA1 [Helianthus tuberosus]
Length = 65
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 218 CRF 220
C+
Sbjct: 62 CKL 64
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP +P C +YM TG CK+G CK H
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKLH 65
Score = 38.5 bits (88), Expect = 4.3, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R E C +YM+TG CKFG+ CK H
Sbjct: 41 RPSEPQCAFYMKTGKCKFGLTCKLH 65
>gi|309257093|gb|ADO62674.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257095|gb|ADO62675.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 61
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 218 C 218
C
Sbjct: 61 C 61
Score = 44.3 bits (103), Expect = 0.080, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADC 172
LSAS N LPERP +P C +YM TG CK+G C
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTC 61
>gi|217074532|gb|ACJ85626.1| unknown [Medicago truncatula]
Length = 162
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
+++ PER P+C YYM TG C YG C+F+HP++R A +AA P R G+
Sbjct: 41 GGAESYPERHGVPNCAYYMRTGFCGYGGRCRFNHPRDRAAVAAAVRATG-DYPERLGEPP 99
Query: 203 CSNYSMYGICKFGPTCRFDHP 223
C Y G CKFG +C+F HP
Sbjct: 100 CQYYLKTGTCKFGASCKFHHP 120
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY++TG+CKFG +CKFHHP
Sbjct: 94 RLGEPPCQYYLKTGTCKFGASCKFHHP 120
>gi|328693155|gb|AEB38189.1| HUA1 [Helianthus tuberosus]
Length = 65
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y+ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFPKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKAGKCKFGLT 61
Query: 218 CRF 220
C+F
Sbjct: 62 CKF 64
Score = 47.8 bits (112), Expect = 0.008, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP +P C +YM G CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKAGKCKFGLTCKFH 65
Score = 38.1 bits (87), Expect = 5.6, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R E C +YM+ G CKFG+ CKFH
Sbjct: 41 RPSEPQCAFYMKAGKCKFGLTCKFH 65
>gi|328693063|gb|AEB38143.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 218 CR 219
C+
Sbjct: 62 CK 63
Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP +P C +YM TG CK+G CK H
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKSH 65
>gi|328693043|gb|AEB38133.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 218 CRF 220
+F
Sbjct: 62 SKF 64
Score = 46.6 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP +P C +YM TG CK+G KFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTSKFH 65
>gi|219130045|ref|XP_002185185.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403364|gb|EEC43317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 549
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-----LPSRPGQAICSNYSMYG 210
DCR Y+ TG CKYG CK++HP QS P+ P R + +C Y +G
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPAN--VQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHG 82
Query: 211 ICKFGPTCRFDHP 223
CKFG C+F+HP
Sbjct: 83 SCKFGQACKFNHP 95
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 28/107 (26%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-------------- 193
P R ++P C+YYM G+CK+G CKF+HP + S + P+
Sbjct: 66 FPVRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTPVTGNGRSTDVPVVFSQ 125
Query: 194 ---------LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 231
LP RP + C + G CK+G TCR+ H P+NY
Sbjct: 126 CDGPMMLQFLPQRPDEPDCIYFLKNGRCKYGATCRYHH-----PVNY 167
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
Q LP+RPD+PDC Y++ G CKYGA C++HHP
Sbjct: 133 QFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP----QPSSLGTALPLTGNA 43
+R +E C YYM+ GSCKFG ACKF+HP S + P+TGN
Sbjct: 68 VRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTPVTGNG 114
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R DE C Y+++ G CK+G C++HHP
Sbjct: 138 RPDEPDCIYFLKNGRCKYGATCRYHHP 164
>gi|219127658|ref|XP_002184048.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404279|gb|EEC44226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 549
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-----LPSRPGQAICSNYSMYG 210
DCR Y+ TG CKYG CK++HP QS P+ P R + +C Y +G
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPAN--VQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHG 82
Query: 211 ICKFGPTCRFDHP 223
CKFG C+F+HP
Sbjct: 83 SCKFGQACKFNHP 95
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 28/107 (26%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-------------- 193
P R ++P C+YYM G+CK+G CKF+HP + S + P+
Sbjct: 66 FPVRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTPVTGNGRSTDVPVVFSQ 125
Query: 194 ---------LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 231
LP RP + C + G CK+G TCR+ H P+NY
Sbjct: 126 CDGPMMLQFLPQRPDEPDCIYFLKNGRCKYGATCRYHH-----PVNY 167
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
Q LP+RPD+PDC Y++ G CKYGA C++HHP
Sbjct: 133 QFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP----QPSSLGTALPLTGNA 43
+R +E C YYM+ GSCKFG ACKF+HP S + P+TGN
Sbjct: 68 VRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTPVTGNG 114
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R DE C Y+++ G CK+G C++HHP
Sbjct: 138 RPDEPDCIYFLKNGRCKYGATCRYHHP 164
>gi|328693047|gb|AEB38135.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T CK+G+ CKF+HPK++IA SA+ N G LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLACKFGSKCKFNHPKDKIASLSASENNGVPELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 218 CRF 220
C+F
Sbjct: 62 CKF 64
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 175
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVPELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFH 26
R E C +YM+TG CKFG+ CKFH
Sbjct: 41 RPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|223945565|gb|ACN26866.1| unknown [Zea mays]
Length = 212
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 90 VSPSQGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL 148
+ P QG+ P+ W+ Y + P P + + + N A S
Sbjct: 1 MVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNHPMYKAADIPGHQPPPSDEY 60
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
PERP QP+C++++ +G CKY C++HHP+ R + + + P+GLP +P
Sbjct: 61 PERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIGLPIKP 110
>gi|328693081|gb|AEB38152.1| HUA1 [Helianthus paradoxus]
gi|328693083|gb|AEB38153.1| HUA1 [Helianthus paradoxus]
Length = 61
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 217
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Score = 40.8 bits (94), Expect = 0.74, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Query: 141 LSASSQN----LPERPDQPDCRYYMNTGTCKYG 169
LSAS N LPERP +P C +YM TG CK+G
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFG 59
>gi|452825226|gb|EME32224.1| tetratricopeptide repeat (TPR)-containing protein [Galdieria
sulphuraria]
Length = 736
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 15/77 (19%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNY 206
P R + PDC YY+ TG C YG+ CKF+HP ER+ + L R C ++
Sbjct: 342 PVRLNSPDCMYYLKTGKCNYGSRCKFNHPPRDERLIK---------ALSRRD----CFDF 388
Query: 207 SMYGICKFGPTCRFDHP 223
+G C +G +C+++HP
Sbjct: 389 LQFGRCPYGKSCKYNHP 405
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 8 CPYYMRTGSCKFGVACKFHHP 28
C YY++TG C +G CKF+HP
Sbjct: 350 CMYYLKTGKCNYGSRCKFNHP 370
>gi|449015918|dbj|BAM79320.1| unknown zinc-finger protein [Cyanidioschyzon merolae strain 10D]
Length = 688
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 130 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAAS 187
G L AGA L++ P R PDC +Y+ TG C++GA CKF+HP R+ S
Sbjct: 222 GMLSAGANTAQLTSRPGVYPCREGAPDCLHYLKTGRCQFGARCKFNHPPRDARLIDSL-- 279
Query: 188 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+ C ++ M G C +G +C+++HP
Sbjct: 280 -----------NRRDCFDWVMTGSCPYGSSCKYNHP 304
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R+ C +Y++TG C+FG CKF+HP
Sbjct: 243 REGAPDCLHYLKTGRCQFGARCKFNHP 269
>gi|297735284|emb|CBI17646.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 137 QMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNIGPL 192
QM++ S+ + PERP +PDC YY+ TG C++G C+F+HP R +A + A G
Sbjct: 31 QMNLRSSETMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIATARMKGE- 89
Query: 193 GLPSRPGQAICSNYSMYGI 211
P R GQ C ++ I
Sbjct: 90 -FPERMGQPECQACVLFFI 107
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 36
R E C YY+RTG C+FG+ C+F+HP L A
Sbjct: 48 RPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIA 82
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 195 PSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ CS Y G+C+FG TCRF+HP
Sbjct: 46 PERPGEPDCSYYIRTGLCRFGITCRFNHP 74
>gi|242036657|ref|XP_002465723.1| hypothetical protein SORBIDRAFT_01g044515 [Sorghum bicolor]
gi|241919577|gb|EER92721.1| hypothetical protein SORBIDRAFT_01g044515 [Sorghum bicolor]
Length = 155
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 13/77 (16%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
Q PERP QPDC++YM G CKY ++C F+HPK+ + +S P A C
Sbjct: 52 QKYPERPGQPDCQHYMQFGKCKYQSECIFNHPKDTL----SSAWHP---------AECPF 98
Query: 206 YSMYGICKFGPTCRFDH 222
Y G +FG C F H
Sbjct: 99 YMETGTYQFGSACEFYH 115
>gi|452819110|gb|EME26200.1| putative zinc-finger protein [Galdieria sulphuraria]
Length = 494
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 25/105 (23%)
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH-PK 178
SNL+ S NQ + SS P R +PDC YY+ TG C YG CK++H P+
Sbjct: 180 SNLVNSEDNQLN------------SSYKYPIRRSRPDCIYYLKTGKCSYGTKCKYNHPPR 227
Query: 179 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
++ A S + C ++ +G C +G C++ HP
Sbjct: 228 DQTLVKALS------------RRECFDFLQFGRCPYGKKCKYSHP 260
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHH-PQPSSLGTAL 37
+R+ C YY++TG C +G CK++H P+ +L AL
Sbjct: 198 IRRSRPDCIYYLKTGKCSYGTKCKYNHPPRDQTLVKAL 235
>gi|227438273|gb|ACP30626.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1276
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 174 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
FHHPK+ ++ GLP RPG+ +C++Y G C GPTC FDHP
Sbjct: 1084 FHHPKDTETSVPEGSLNLEGLPLRPGKPVCASYFHTGSCISGPTCIFDHP 1133
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
S + + LP RP +P C Y +TG+C G C F HP
Sbjct: 1098 SLNLEGLPLRPGKPVCASYFHTGSCISGPTCIFDHP 1133
>gi|440302333|gb|ELP94655.1| tristetraproline, putative [Entamoeba invadens IP1]
Length = 211
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y+ TGTC+YGA C+F H + P+ R IC + G CK+G
Sbjct: 115 CRSYVETGTCRYGAKCQFAH--------GEKELRPVQRHPRYKTEICQTFQQTGSCKYGS 166
Query: 217 TCRFDH 222
CRF H
Sbjct: 167 RCRFIH 172
>gi|147795077|emb|CAN60857.1| hypothetical protein VITISV_026075 [Vitis vinifera]
Length = 300
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL--GLPSRPGQAICSNYSMYGICKF 214
CR + + +C+YGA C+F H KE + PL + +RP +C +++ G C +
Sbjct: 144 CRSWEDLASCRYGAKCQFAHGKEELR--------PLRYSMRTRPEGNVCKQFAVTGTCPY 195
Query: 215 GPTCRFDH 222
GP CRF H
Sbjct: 196 GPRCRFSH 203
>gi|227438197|gb|ACP30588.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1108
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
LPERP P+C +YM G C G DCKFHHP++R
Sbjct: 1051 LPERPGLPECLFYMKRGYCILGNDCKFHHPRDR 1083
>gi|308800900|ref|XP_003075231.1| endoribonuclease/protein kinase IRE1-like protein (ISS)
[Ostreococcus tauri]
gi|116061785|emb|CAL52503.1| endoribonuclease/protein kinase IRE1-like protein (ISS), partial
[Ostreococcus tauri]
Length = 971
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 139 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
H + Q PERP + C +YM TG CK+GA C+FHHP++
Sbjct: 917 HAPMVAPQIFPERPGRELCEFYMKTGRCKFGASCRFHHPRD 957
Score = 46.6 bits (109), Expect = 0.017, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 184 SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
S A + P P RPG+ +C Y G CKFG +CRF HP
Sbjct: 916 SHAPMVAPQIFPERPGRELCEFYMKTGRCKFGASCRFHHP 955
Score = 45.1 bits (105), Expect = 0.047, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R + C +YM+TG CKFG +C+FHHP+
Sbjct: 929 RPGRELCEFYMKTGRCKFGASCRFHHPR 956
>gi|167378199|ref|XP_001734711.1| tristetraproline [Entamoeba dispar SAW760]
gi|165903659|gb|EDR29114.1| tristetraproline, putative [Entamoeba dispar SAW760]
Length = 211
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR ++ TGTC+YG C+F H + P+ R IC + G CK+G
Sbjct: 111 CRSFVETGTCRYGNKCQFAH--------GEKELRPVQRHPRYKTEICQTFHQTGTCKYGS 162
Query: 217 TCRFDHPYAGYP 228
CRF H G P
Sbjct: 163 RCRFIHVLPGEP 174
>gi|183232062|ref|XP_652977.2| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|169802218|gb|EAL47591.2| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|407042890|gb|EKE41602.1| zinc finger protein, putative [Entamoeba nuttalli P19]
gi|449705641|gb|EMD45650.1| zinc finger protein, putative [Entamoeba histolytica KU27]
Length = 212
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR ++ TGTC+YG C+F H ++ + P+ R IC + G CK+G
Sbjct: 112 CRSFVETGTCRYGNKCQFAHGEKELR--------PVQRHPRYKTEICQTFHQTGTCKYGS 163
Query: 217 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQ 272
CRF H G LS P + S N IS+T + S+++P + Q
Sbjct: 164 RCRFIHVLPG-----ELSPAPDCVDISQSQNFSDISSTD------EDSNRLPVFEQ 208
>gi|413947009|gb|AFW79658.1| hypothetical protein ZEAMMB73_788382, partial [Zea mays]
Length = 96
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS 187
A + LPERP + DC YY+ TG C YG C+++HP++R A +AS
Sbjct: 33 AGEEKLPERPGEADCTYYLRTGACGYGERCRYNHPRDRPAPVSAS 77
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS 47
R E C YY+RTG+C +G C+++HP+ + LT ASL +
Sbjct: 41 RPGEADCTYYLRTGACGYGERCRYNHPRDRPAPVSASLTHAASLSA 86
Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 190 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G LP RPG+A C+ Y G C +G CR++HP
Sbjct: 34 GEEKLPERPGEADCTYYLRTGACGYGERCRYNHP 67
>gi|309257099|gb|ADO62677.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 51
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 206
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFY 49
>gi|309256989|gb|ADO62622.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257065|gb|ADO62660.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257067|gb|ADO62661.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257117|gb|ADO62686.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257119|gb|ADO62687.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257121|gb|ADO62688.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257123|gb|ADO62689.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257155|gb|ADO62705.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|328693097|gb|AEB38160.1| HUA1 [Helianthus exilis]
gi|328693099|gb|AEB38161.1| HUA1 [Helianthus exilis]
Length = 51
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 206
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFY 49
>gi|309256921|gb|ADO62588.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256923|gb|ADO62589.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
Length = 52
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 206
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFY 49
>gi|309257035|gb|ADO62645.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 50
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 206
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPQCAFY 49
>gi|412988846|emb|CCO15437.1| predicted protein [Bathycoccus prasinos]
Length = 1073
Score = 53.1 bits (126), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
QN P RP+ DC +Y+ TG CKYG CKF+HP
Sbjct: 1034 QNFPVRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 188 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
++ P P RP C Y G CK+G TC+F+HP
Sbjct: 1030 DLPPQNFPVRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + C +Y++TG CK+G CKF+HP
Sbjct: 1038 VRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
>gi|205688000|sp|A3CEM4.2|C3H64_ORYSJ RecName: Full=Putative zinc finger CCCH domain-containing protein
64; Short=OsC3H64
gi|108862135|gb|ABG21865.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza sativa
Japonica Group]
Length = 527
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 103 NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMN 162
N + G + ++ IAG ++ S + AG + +L Q PERP +P CRYYM
Sbjct: 167 NAHDGILDDINCAQIAGKHVGDHSNCANVIKAGV-ISLLGKLVQ-YPERPGEPFCRYYMK 224
Query: 163 TGTCKYGADCKFHHPKERIAQSAASNI 189
G CK+ CK++HPK+R + + I
Sbjct: 225 FGECKHMTFCKYNHPKDRFSCKTTNTI 251
>gi|309257071|gb|ADO62663.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257105|gb|ADO62680.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257107|gb|ADO62681.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257111|gb|ADO62683.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 50
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 206
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFY 49
>gi|302790343|ref|XP_002976939.1| hypothetical protein SELMODRAFT_416803 [Selaginella moellendorffii]
gi|300155417|gb|EFJ22049.1| hypothetical protein SELMODRAFT_416803 [Selaginella moellendorffii]
Length = 425
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TG+C+YG C+F H KE ++ P+ + +C +S G C +G
Sbjct: 16 CRSWEETGSCRYGNKCQFAHGKE--------DLRPVNRHPKYKTEVCRTFSAAGTCPYGK 67
Query: 217 TCRFDHPYAGYPINYGLSLPPL 238
CRF H P + LPPL
Sbjct: 68 RCRFIH---ATPKLSDVKLPPL 86
>gi|449015411|dbj|BAM78813.1| unknown zinc finger protein [Cyanidioschyzon merolae strain 10D]
Length = 647
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR ++ TG C+YG+ C+F H +E + PL + +C N++ G C +G
Sbjct: 245 CRSWIETGACRYGSKCQFAHGQE--------ELRPLPRHPKYKTKVCKNFAENGSCPYGS 296
Query: 217 TCRFDH 222
CRF H
Sbjct: 297 RCRFIH 302
>gi|413916357|gb|AFW56289.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 19/103 (18%)
Query: 95 GIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS-------SQ 146
G P P GW+ GP+ P I L+ GD GAG + + +
Sbjct: 53 GGFPEPSGWDD-----GPV-PVPIPADVLV-----GGDEGAGEKPRAPAPAPTGAVDVKV 101
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 189
P RP +PDC YY+ GTC++G CKF+HP + S +
Sbjct: 102 RFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGV 144
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ CS Y +G C+FG C+F+HP
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHP 132
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R E C YY++ G+C+FG+ CKF+HP
Sbjct: 106 RPGEPDCSYYLKFGTCRFGMKCKFNHP 132
>gi|224123158|ref|XP_002330353.1| predicted protein [Populus trichocarpa]
gi|222871557|gb|EEF08688.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 132 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 183
L G L + PER ++ DC YY+ TG C YGA C+++HP++R A+
Sbjct: 28 LEEGVWQLGLGETESEYPERSNEQDCMYYLRTGFCGYGARCRYNHPRDRNAE 79
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQ 29
R +E+ C YY+RTG C +G C+++HP+
Sbjct: 47 RSNEQDCMYYLRTGFCGYGARCRYNHPR 74
>gi|309256991|gb|ADO62623.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 51
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 206
Y++ T TCK+G+ CKF+HPK +IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKYKIASLSASENNGVLELPERPSEPQCAFY 49
>gi|413947006|gb|AFW79655.1| hypothetical protein ZEAMMB73_121035 [Zea mays]
Length = 132
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
++ LPERP + DC YY+ TG C +G C+++HP++R
Sbjct: 54 ANARLPERPGEADCGYYLRTGACGFGERCRYNHPRDR 90
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP--YAGYPINYGLSLPPLS 239
LP RPG+A C Y G C FG CR++HP G + G P S
Sbjct: 58 LPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEVRAGGRFSPAS 105
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSV 52
R E C YY+RTG+C FG C+++HP+ GT + G S S S+
Sbjct: 61 RPGEADCGYYLRTGACGFGERCRYNHPRDRG-GTEVRAGGRFSPASASRSL 110
>gi|28393414|gb|AAO42129.1| unknown protein [Arabidopsis thaliana]
Length = 151
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
R+ A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 1 RVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 44
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 181
LP RP C +Y+ G CK+G+ CKF HP I
Sbjct: 15 LPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTI 48
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R + C +Y++ G CKFG CKF HP
Sbjct: 17 LRPGVQRCTFYVQNGFCKFGSTCKFDHP 44
>gi|302797845|ref|XP_002980683.1| hypothetical protein SELMODRAFT_112852 [Selaginella moellendorffii]
gi|300151689|gb|EFJ18334.1| hypothetical protein SELMODRAFT_112852 [Selaginella moellendorffii]
Length = 119
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TG+C+YG C+F H KE ++ P+ + +C +S G C +G
Sbjct: 16 CRSWEETGSCRYGNKCQFAHGKE--------DLRPVNRHPKYKTEVCRTFSAAGTCPYGK 67
Query: 217 TCRFDHPYAGYPINYGLSLPPL 238
CRF H P + LPPL
Sbjct: 68 RCRFIH---ATPKLSDVKLPPL 86
>gi|145479755|ref|XP_001425900.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392972|emb|CAK58502.1| unnamed protein product [Paramecium tetraurelia]
Length = 155
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+Y+ G C YG C F H K + Q + +P IC NY+ G C +G
Sbjct: 54 CKYWSIEGYCPYGKQCAFAHGKHEVRQK-------VHVPHNYKTQICKNYTKDGYCCYGE 106
Query: 217 TCRFDHPYAGYPINYGLSLPPLS 239
C+F HP G LPPL+
Sbjct: 107 RCQFKHPEKK-----GNKLPPLT 124
>gi|303275406|ref|XP_003056997.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461349|gb|EEH58642.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 481
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHP 177
P RP QP+C +Y+ TG CK+G CKFHHP
Sbjct: 448 PSRPGQPECVFYVKTGRCKFGHTCKFHHP 476
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 178 KERIAQSAASNIG--PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
++R A+ AA P+ PSRPGQ C Y G CKFG TC+F HP
Sbjct: 429 QKRAAERAAVIDATPPVTYPSRPGQPECVFYVKTGRCKFGHTCKFHHP 476
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 7 SCPYYMRTGSCKFGVACKFHHP 28
C +Y++TG CKFG CKFHHP
Sbjct: 455 ECVFYVKTGRCKFGHTCKFHHP 476
>gi|145553048|ref|XP_001462199.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430037|emb|CAK94826.1| unnamed protein product [Paramecium tetraurelia]
Length = 157
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+Y+ G C YG C F H K+ + Q + +PS C NY+ G C +G
Sbjct: 51 CKYWAIEGYCPYGQQCAFAHGKDEVRQK-------VHVPSNYKTKTCKNYTQDGYCCYGE 103
Query: 217 TCRFDHP 223
C+F HP
Sbjct: 104 RCQFKHP 110
>gi|145483383|ref|XP_001427714.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394797|emb|CAK60316.1| unnamed protein product [Paramecium tetraurelia]
Length = 157
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+Y+ G C YG C F H K+ + Q + +PS C NY+ G C +G
Sbjct: 51 CKYWAIEGYCPYGQQCAFAHGKDEVRQK-------VHVPSNYKTKTCKNYTQDGYCCYGE 103
Query: 217 TCRFDHP 223
C+F HP
Sbjct: 104 RCQFKHP 110
>gi|118357333|ref|XP_001011916.1| hypothetical protein TTHERM_00394440 [Tetrahymena thermophila]
gi|89293683|gb|EAR91671.1| hypothetical protein TTHERM_00394440 [Tetrahymena thermophila
SB210]
Length = 459
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ +++ G C+YG C+F H KE + I L + +CS Y +C++
Sbjct: 188 CKNWVSKGVCQYGQKCRFAHGKEEL-------IERLAMNKNYKTKLCSAYHKEQVCQYAA 240
Query: 217 TCRFDH 222
C F H
Sbjct: 241 RCHFKH 246
>gi|167524835|ref|XP_001746753.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775023|gb|EDQ88649.1| predicted protein [Monosiga brevicollis MX1]
Length = 391
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + NTG C+YG C+F H + + PL + +C + G+C +GP
Sbjct: 72 CRSWSNTGACRYGDKCQFAH--------GEAELRPLQRHPKYKTELCRTFHTQGVCPYGP 123
Query: 217 TCRFDH 222
C F H
Sbjct: 124 RCHFVH 129
>gi|255077605|ref|XP_002502437.1| Endoribonuclease/protein kinase [Micromonas sp. RCC299]
gi|226517702|gb|ACO63695.1| Endoribonuclease/protein kinase [Micromonas sp. RCC299]
Length = 1053
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 144 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
+S P RP +PDC +++ TG CK+GA CKF+HP
Sbjct: 1015 TSVEYPVRPGEPDCVFWIKTGRCKFGAGCKFNHP 1048
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHP 28
+R E C ++++TG CKFG CKF+HP
Sbjct: 1021 VRPGEPDCVFWIKTGRCKFGAGCKFNHP 1048
>gi|255071555|ref|XP_002499452.1| predicted protein [Micromonas sp. RCC299]
gi|226514714|gb|ACO60710.1| predicted protein [Micromonas sp. RCC299]
Length = 469
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TGTC+YGA C+F H ++ + P+ + +C ++ G C +G
Sbjct: 288 CRSWEETGTCRYGAKCQFSHGRD--------ELRPVLRHPKYKTEVCRTFAQNGTCPYGT 339
Query: 217 TCRFDH 222
CRF H
Sbjct: 340 RCRFIH 345
>gi|390332031|ref|XP_782924.3| PREDICTED: uncharacterized protein LOC577616 isoform 1
[Strongylocentrotus purpuratus]
Length = 886
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 157 CRYYMNTGTCKYGADCKFHHP-------KER------IAQSAASNIGPLGLPSRPGQAIC 203
C Y++ +G C YG +C+F HP +ER A++ AS+ G S+P Q +C
Sbjct: 124 CSYFVRSGRCSYGRNCRFLHPARPEGHSRERGSTAKPDAKTPASSTGDKAT-SQPKQ-VC 181
Query: 204 SNYSMYGICKFGPTCRFDH 222
Y+ G C +G CRF H
Sbjct: 182 KFYARSGWCSYGYRCRFSH 200
>gi|297845880|ref|XP_002890821.1| hypothetical protein ARALYDRAFT_313613 [Arabidopsis lyrata subsp.
lyrata]
gi|297336663|gb|EFH67080.1| hypothetical protein ARALYDRAFT_313613 [Arabidopsis lyrata subsp.
lyrata]
Length = 295
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 25/135 (18%)
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
+GS ++ R QG +LSA P RP + +C +Y+ C +G+DC ++HP
Sbjct: 106 SGSTMMLEERTQG-----RSEPVLSA----YPIRPGEENCPFYLKNHLCGWGSDCCYNHP 156
Query: 178 KERIAQSAASNIGPL-GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG-YPINYGLSL 235
PL +P R G + + G CK G C+F HP G P+ G +
Sbjct: 157 -------------PLHEIPYRIGNKLDCKFFKAGSCKRGSNCQFYHPRDGAEPMRQGRT- 202
Query: 236 PPLSILDSSLMNHQA 250
P L DS ++
Sbjct: 203 PDLRRNDSGRRRYKT 217
>gi|452823861|gb|EME30868.1| zinc finger protein isoform 2 [Galdieria sulphuraria]
gi|452823862|gb|EME30869.1| zinc finger protein isoform 1 [Galdieria sulphuraria]
Length = 364
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR +M TG C+Y + C+F H E + P+ + +C N+ G C +G
Sbjct: 259 CRSFMETGFCRYHSKCQFAHGVEELR--------PVKRHPKYKTRLCKNFVENGTCPYGS 310
Query: 217 TCRFDHPYAGYPINYGLSLP-PLSILDSSL---MNHQAISATHSIETSPDASSK 266
CRF H +G GL L++ SL H + ++E D SK
Sbjct: 311 RCRFIHGSSGASSFEGLQTDLLLAVQGISLGKERRHSRLPVFQTLEEKSDIHSK 364
>gi|297845874|ref|XP_002890818.1| hypothetical protein ARALYDRAFT_890484 [Arabidopsis lyrata subsp.
lyrata]
gi|297336660|gb|EFH67077.1| hypothetical protein ARALYDRAFT_890484 [Arabidopsis lyrata subsp.
lyrata]
Length = 269
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 14/74 (18%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
P RP +C+ Y+ TG C++G+ C+++HP +R P P IC Y +
Sbjct: 65 PVRPGVENCQCYIKTGLCRFGSSCRYNHPNQR----------PQVRIDAP---ICK-YFL 110
Query: 209 YGICKFGPTCRFDH 222
G CKFG C F H
Sbjct: 111 KGSCKFGSACIFQH 124
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 178 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
KER+ QS+ P RPG C Y G+C+FG +CR++HP
Sbjct: 55 KERMTQSSP-------YPVRPGVENCQCYIKTGLCRFGSSCRYNHP 93
>gi|440798766|gb|ELR19831.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 740
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR ++ TG C+YG+ C+F H ++ + P+ + IC + G C +G
Sbjct: 245 CRSFVETGACRYGSKCQFAHGRKELR--------PVLRHPKYKTEICKTFHTIGTCPYGT 296
Query: 217 TCRFDHPYAG 226
CRF H G
Sbjct: 297 RCRFIHKRPG 306
>gi|145342006|ref|XP_001416089.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576313|gb|ABO94381.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 457
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
Q P RP + C +YM TG CK+GA CKF HP+
Sbjct: 415 QVFPSRPGREPCEFYMKTGRCKFGATCKFDHPQ 447
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 22/35 (62%)
Query: 189 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
I P PSRPG+ C Y G CKFG TC+FDHP
Sbjct: 412 IAPQVFPSRPGREPCEFYMKTGRCKFGATCKFDHP 446
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 17/22 (77%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQ 29
C +YM+TG CKFG CKF HPQ
Sbjct: 426 CEFYMKTGRCKFGATCKFDHPQ 447
>gi|62318618|dbj|BAD95055.1| zinc finger protein 2 [Arabidopsis thaliana]
Length = 120
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 111 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL---PERPDQPDCRYYMNTGTCK 167
P+S T S+L+ + A +M + + L P+RP + DC++Y+ TG C
Sbjct: 4 PMSDTQHVQSSLVSIRSSDKIEDAFRKMKVNETGVEELNPYPDRPGERDCQFYLRTGLCG 63
Query: 168 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 204
YG+ C+++HP + Q A LP R GQ C
Sbjct: 64 YGSSCRYNHPT-HLPQDVAYYKEE--LPERIGQPDCE 97
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 178 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
K ++ ++ + P P RPG+ C Y G+C +G +CR++HP
Sbjct: 30 KMKVNETGVEELNPY--PDRPGERDCQFYLRTGLCGYGSSCRYNHP 73
>gi|402580615|gb|EJW74564.1| hypothetical protein WUBG_14528 [Wuchereria bancrofti]
Length = 253
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ ++ +G C + +C+F H +E + N P+ P + +C Y+M G+C +G
Sbjct: 2 CQAWLESGICNFAENCRFAHGEEELR---PCNKLPMKNPKYKTK-LCDKYTMAGLCPYGD 57
Query: 217 TCRFDHPYAG 226
C F HP A
Sbjct: 58 RCLFIHPEAS 67
>gi|170590238|ref|XP_001899879.1| Tristetraproline [Brugia malayi]
gi|158592511|gb|EDP31109.1| Tristetraproline, putative [Brugia malayi]
Length = 256
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 14/120 (11%)
Query: 116 SIAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYYMN 162
++ G +L+ S + DL + S L ER + C+ + +
Sbjct: 3 AVIGQDLLREKPFDSGFKKSDLYIWQWFQFIHQSQVLLAERKQKRKAETHKTVPCQAWKD 62
Query: 163 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
TG C YG CKF H E + + + P R A C Y+ +G C +G C F H
Sbjct: 63 TGRCNYGKRCKFAHGPEELRPMPKTEVKIFSNP-RYRTAFCIKYTTFGYCPYGDQCHFIH 121
>gi|452819712|gb|EME26766.1| zinc finger protein [Galdieria sulphuraria]
Length = 278
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR +M TG C+YG C+F H E + Q + + C N+ G C +G
Sbjct: 170 CRSFMETGFCRYGVKCQFAHGTEELRQ--------VKRHPKYKTRYCRNFMKEGNCPYGS 221
Query: 217 TCRFDHPYAG 226
CRF H G
Sbjct: 222 RCRFIHRRRG 231
>gi|402592884|gb|EJW86811.1| hypothetical protein WUBG_02280 [Wuchereria bancrofti]
Length = 256
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 14/120 (11%)
Query: 116 SIAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYYMN 162
++ G +L+ S + DL + S L ER + C+ + +
Sbjct: 3 AVIGQDLLREKPFDSGFEKSDLYIWQWFQFVYQSQVLLAERKQKRKAETHKTVPCQAWKD 62
Query: 163 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
TG C YG CKF H E + + + P R A C Y+ +G C +G C F H
Sbjct: 63 TGRCNYGKRCKFAHGPEELRPMPKAEVKIFSNP-RYRTAFCIKYTTFGYCPYGDQCHFIH 121
>gi|268533062|ref|XP_002631659.1| C. briggsae CBR-MEX-1 protein [Caenorhabditis briggsae]
Length = 405
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 34/144 (23%)
Query: 136 AQMHILSASSQNLPERPDQPD-------CRYYMNTGTCKYGADCKFHHPKERIAQSAASN 188
AQ ++ + L +R + + C + GTC YG C+F H +
Sbjct: 119 AQWETMTDDERELIQRQKRKEEAFKTALCDAFKRAGTCPYGETCRFAHGE---------- 168
Query: 189 IGPLGLPSRP-GQA-------ICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
L +PS+P G+A +C +S YG C +GP C+F H + GL PL
Sbjct: 169 -NELRMPSQPRGKAHPKYKTQLCDKFSTYGQCPYGPRCQFIH-----KLKKGL---PLLE 219
Query: 241 LDSSLMNHQAISATHSIETSPDAS 264
+ +L + A T+PD S
Sbjct: 220 YNRALFQGRISPAREDEITNPDES 243
>gi|312071645|ref|XP_003138704.1| tristetraproline [Loa loa]
gi|307766137|gb|EFO25371.1| tristetraproline [Loa loa]
Length = 266
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 9/122 (7%)
Query: 109 IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYY 160
+G S ++L + + DL + S L ER + C+ +
Sbjct: 10 LGEKSQDFSLKTSLSLTDFHNNDLYIWQWFQFIYQSQLLLAERKQKRKAETHKTVPCQAW 69
Query: 161 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRF 220
+TG C YG CKF H E + + + P R A+C Y+ +G C +G C F
Sbjct: 70 KDTGRCNYGKRCKFAHGPEELRPMPKAEVKVFNNP-RYRTALCIKYTTFGYCPYGDQCHF 128
Query: 221 DH 222
H
Sbjct: 129 IH 130
>gi|148225622|ref|NP_001081884.1| ZFP36 ring finger protein [Xenopus laevis]
gi|4580020|gb|AAD24207.1|AF061980_1 CCCH zinc finger protein C3H-1 [Xenopus laevis]
gi|51950038|gb|AAH82435.1| C3H-1 protein [Xenopus laevis]
gi|80477840|gb|AAI08849.1| C3H-1 protein [Xenopus laevis]
Length = 313
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TGTCKYGA C+F H K + + N P + +C + +YG C +G
Sbjct: 109 CRTFSETGTCKYGAKCQFAHGKIELRE---PNRHP-----KYKTELCHKFYLYGECPYGS 160
Query: 217 TCRFDH 222
C F H
Sbjct: 161 RCNFIH 166
>gi|326433056|gb|EGD78626.1| hypothetical protein PTSG_01604 [Salpingoeca sp. ATCC 50818]
Length = 888
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR +++ CKYG C+F H +E + P+ + +C + G+C +GP
Sbjct: 243 CRAWLDGKVCKYGEKCQFAHGEEELR--------PIQRHPKYKTELCRTFHTTGVCPYGP 294
Query: 217 TCRFDH 222
C F H
Sbjct: 295 RCHFIH 300
>gi|392891963|ref|NP_001254325.1| Protein MEX-1, isoform a [Caenorhabditis elegans]
gi|1899062|gb|AAC47486.1| MEX-1 [Caenorhabditis elegans]
gi|14530587|emb|CAA91362.2| Protein MEX-1, isoform a [Caenorhabditis elegans]
Length = 494
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP-GQA-------ICSNYSM 208
C + +G+C YG C+F H + L +PS+P G+A +C +S
Sbjct: 144 CDAFKRSGSCPYGEACRFAHGE-----------NELRMPSQPRGKAHPKYKTQLCDKFSN 192
Query: 209 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASS 265
+G C +GP C+F H + GL PLS + +L + A T+PD SS
Sbjct: 193 FGQCPYGPRCQFIH-----KLKKGL---PLSEYNRALQEGEISPARDDEITNPDESS 241
>gi|307108237|gb|EFN56478.1| hypothetical protein CHLNCDRAFT_15825, partial [Chlorella
variabilis]
Length = 64
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TG+C+YGA C+F H +E + P+ + +C ++ G C +G
Sbjct: 6 CRSWEETGSCRYGAKCQFAHGREELR--------PVLRHPKYKTEVCRTFAQSGTCPYGT 57
Query: 217 TCRFDH 222
CRF H
Sbjct: 58 RCRFIH 63
>gi|409051670|gb|EKM61146.1| hypothetical protein PHACADRAFT_134399 [Phanerochaete carnosa
HHB-10118-sp]
Length = 296
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQ----AICSNYSMY 209
P+C +Y G C G +C + HPKER + N G L PS P + +C NY +
Sbjct: 123 PECWWYAKYGYCSAGDECLYAHPKERRVECPDYNRGFCKLGPSCPRKHVRRVVCQNY-LT 181
Query: 210 GICKFGPTCRFDHPYAGYPI 229
G C GP C HP P+
Sbjct: 182 GFCPLGPECPRGHPKPDLPL 201
>gi|326513767|dbj|BAJ87902.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 88
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 151 RPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
RP +PDC YY+ TG C +G C F+HP++R
Sbjct: 21 RPGEPDCTYYLRTGLCSFGMSCTFNHPQDR 50
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPL 39
+R E C YY+RTG C FG++C F+HPQ + + LPL
Sbjct: 20 VRPGEPDCTYYLRTGLCSFGMSCTFNHPQDRNTVSRLPL 58
>gi|403418466|emb|CCM05166.1| predicted protein [Fibroporia radiculosa]
Length = 281
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 210
P+C +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 125 PECWWYAKYGYCSAGDECLYAHPKERRIECPDYNRGFCQLGPTCPRKHVRRVACQLYLTG 184
Query: 211 ICKFGPTCRFDHPYAGYPINYGLSLPP 237
C GP C HP G P+ PP
Sbjct: 185 FCPMGPDCARGHPKPGVPLPEAYEPPP 211
>gi|229596656|ref|XP_001007937.3| zinc finger protein [Tetrahymena thermophila]
gi|225565181|gb|EAR87692.3| zinc finger protein [Tetrahymena thermophila SB210]
Length = 309
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 142 SASSQNLPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 199
+AS+ +PE C+ ++ G C YG CKF H K + Q A+N
Sbjct: 167 AASTNVIPEEAKYKTEMCKNWVENGKCNYGDKCKFAHGKNELVQKVAAN-------KHFK 219
Query: 200 QAICSNYSMYGICKFGPTCRFDH 222
C Y +C +GP C F H
Sbjct: 220 TKKCKQYYESCVCNYGPRCHFVH 242
>gi|340710256|ref|XP_003393709.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Bombus terrestris]
Length = 419
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+ N G C+ G +C++ H + I +P P IC + +GICKFG
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTEGAWNDETNETIISSSVP--PVNNICR-FFKHGICKFGN 66
Query: 217 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKIPNWVQ 272
C F H N + S+ +SS H + IS + +I+ + D WV+
Sbjct: 67 QCYFRHTIESVDNNV---VNANSVENSSAGQHTSNISTSTTIKIAKDNIRNAEEWVK 120
>gi|149239799|ref|XP_001525775.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449898|gb|EDK44154.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 504
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C +M TG C YG C+F H ++ + P S+P C+N++ YG C++G
Sbjct: 445 CAPFMKTGVCTYGTKCQFAHGEQELKHVER----PPKWRSKP----CTNWAKYGSCRYGN 496
Query: 217 TCRFDH 222
C F H
Sbjct: 497 RCCFKH 502
>gi|17543792|ref|NP_502805.1| Protein CCCH-5 [Caenorhabditis elegans]
gi|3881203|emb|CAB16528.1| Protein CCCH-5 [Caenorhabditis elegans]
Length = 199
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ + T C YG CKF H E + Q N+G + P + +C N+S G CK+G
Sbjct: 74 CKTFQLTKACSYGEQCKFAHSVEEL-QLKHQNLG-INNP-KYKTVLCDNFSTTGHCKYGT 130
Query: 217 TCRFDH 222
C+F H
Sbjct: 131 KCQFIH 136
>gi|190348309|gb|EDK40740.2| hypothetical protein PGUG_04838 [Meyerozyma guilliermondii ATCC
6260]
Length = 156
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C YM G C YG C+F H E + Q + P S+P C N++ YG C++G
Sbjct: 98 CASYMKMGVCPYGGKCQFAHGTEELKQVSR----PPKWRSKP----CVNWAKYGACRYGN 149
Query: 217 TCRFDH 222
C F H
Sbjct: 150 RCCFKH 155
>gi|146413825|ref|XP_001482883.1| hypothetical protein PGUG_04838 [Meyerozyma guilliermondii ATCC
6260]
Length = 156
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C YM G C YG C+F H E + Q + P S+P C N++ YG C++G
Sbjct: 98 CASYMKMGVCPYGGKCQFAHGTEELKQVSR----PPKWRSKP----CVNWAKYGACRYGN 149
Query: 217 TCRFDH 222
C F H
Sbjct: 150 RCCFKH 155
>gi|302842550|ref|XP_002952818.1| hypothetical protein VOLCADRAFT_93596 [Volvox carteri f.
nagariensis]
gi|300261858|gb|EFJ46068.1| hypothetical protein VOLCADRAFT_93596 [Volvox carteri f.
nagariensis]
Length = 1316
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
+ +S LP RP+ +C YYM GTC YG CK++HP
Sbjct: 826 AGTSDALPRRPNTMNCPYYMRYGTCGYGGSCKYNHP 861
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R + +CPYYMR G+C +G +CK++HP
Sbjct: 835 RPNTMNCPYYMRYGTCGYGGSCKYNHP 861
>gi|50307627|ref|XP_453793.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642927|emb|CAH00889.1| KLLA0D16610p [Kluyveromyces lactis]
Length = 310
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + GTCKYG C+F H + SN ++P C N+ YG C++G
Sbjct: 214 CESFATKGTCKYGNKCQFAHGLHELKIKERSN----NFRTKP----CVNWQKYGYCRYGK 265
Query: 217 TCRFDH 222
C F H
Sbjct: 266 RCCFKH 271
>gi|443705950|gb|ELU02246.1| hypothetical protein CAPTEDRAFT_213784 [Capitella teleta]
Length = 334
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 77/221 (34%), Gaps = 56/221 (25%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R D ++C ++ + CKFG +C F H L G+A L + ++
Sbjct: 169 RNDTEACRFFAKYDWCKFGDSCHFSHAN---------LDGSADLPYQEQDLFDPEFFGFS 219
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
Y L+ SQG P WN +
Sbjct: 220 --------------------EDDYTELL---SQGFQP---WND--------------DHD 239
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 181
L+ + + G + S+ + ++P C ++ + G CKYGADC F H +
Sbjct: 240 LMTRALSVLHSGEDYDDDVYSSVGPSPAKKP----CFFFQDHGYCKYGADCYFSHDVPAV 295
Query: 182 AQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
A+ P R + I + + C++G CRF H
Sbjct: 296 PTGGATYTSP---QQRNTKDIPCRFFLNDSCRYGDQCRFSH 333
>gi|432892293|ref|XP_004075749.1| PREDICTED: uncharacterized protein LOC101175179 [Oryzias latipes]
Length = 412
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNY 206
P R CR + TG+CKYG+ C+F H + + GL P C +
Sbjct: 145 PNRYKTELCRGFQETGSCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTF 194
Query: 207 SMYGICKFGPTCRFDHP--YAGYPIN 230
+G C +GP C F H AG P++
Sbjct: 195 YNFGYCPYGPRCHFIHEEKIAGAPLS 220
>gi|384485557|gb|EIE77737.1| hypothetical protein RO3G_02441 [Rhizopus delemar RA 99-880]
Length = 434
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR ++ G C+YG+ C++ H ++ I + +R IC +Y + G C +G
Sbjct: 283 CRNWIELGVCRYGSKCRYAHGEQEIR--------TITRHARYKTEICRDYHLDGTCPYGT 334
Query: 217 TCRFDHP 223
C F H
Sbjct: 335 RCTFIHA 341
>gi|302695329|ref|XP_003037343.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
gi|300111040|gb|EFJ02441.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
Length = 287
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 210
P+C +Y G C G +C + HPKER + G L P + + I + G
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERKVECPDYKRGFCKLGPSCPRKHIRRIACQLYLTG 180
Query: 211 ICKFGPTCRFDHPYAGYPINYGLSLPP 237
C GP C HP G P LPP
Sbjct: 181 FCPMGPDCPRGHPKPGLPPPEAYELPP 207
>gi|448111297|ref|XP_004201809.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
gi|359464798|emb|CCE88503.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
Length = 334
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C Y+ TG C YG+ C+F H + + P S+P C+N+S +G C++G
Sbjct: 275 CASYVKTGVCPYGSKCQFAHGESELKHVDR----PPNWRSKP----CANWSKFGTCRYGS 326
Query: 217 TCRFDH 222
C F H
Sbjct: 327 RCCFKH 332
>gi|341885390|gb|EGT41325.1| CBN-MEX-1 protein [Caenorhabditis brenneri]
Length = 501
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 136 AQMHILSASSQNLPERPDQPD-------CRYYMNTGTCKYGADCKFHHPKERIAQSAASN 188
AQ ++ + + +R + + C + G+C YG C+F H +
Sbjct: 133 AQWETMTDDEREIVQRQKRKEEAFKTALCDAFKRNGSCPYGESCRFAHGE---------- 182
Query: 189 IGPLGLPSRP-GQA-------ICSNYSMYGICKFGPTCRFDHPY-AGYPI 229
L +PS+P G+A +C +S YG C +GP C+F H G P+
Sbjct: 183 -NELRMPSQPRGKAHPKYKTQLCDKFSTYGQCPYGPRCQFIHKLKKGLPL 231
>gi|328877006|gb|EGG25369.1| CCCH-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 699
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 14/74 (18%)
Query: 151 RPDQPD----CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 206
R D P C+ + +GTC YG CK+ H + + +IG C +
Sbjct: 121 REDVPKELRLCQLNLRSGTCTYGDSCKYSHDLVKYMELKPKSIGDK----------CIFF 170
Query: 207 SMYGICKFGPTCRF 220
YG CK+G TCRF
Sbjct: 171 DTYGFCKYGITCRF 184
>gi|308502528|ref|XP_003113448.1| CRE-MEX-1 protein [Caenorhabditis remanei]
gi|308263407|gb|EFP07360.1| CRE-MEX-1 protein [Caenorhabditis remanei]
Length = 518
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 27/110 (24%)
Query: 136 AQMHILSASSQNLPERPDQPD-------CRYYMNTGTCKYGADCKFHHPKERIAQSAASN 188
AQ ++ + + +R + + C Y G+C YG C+F H +
Sbjct: 141 AQWETMTDDEREMIQRQKRKEEAFKTALCDAYKRNGSCPYGEACRFAHGE---------- 190
Query: 189 IGPLGLPSRP-GQA-------ICSNYSMYGICKFGPTCRFDHPY-AGYPI 229
L +PS+P G+A +C +S YG C +GP C+F H G P+
Sbjct: 191 -NELRMPSQPRGKAHPKYKTQLCDKFSTYGQCPYGPRCQFIHKLKKGLPL 239
>gi|453087467|gb|EMF15508.1| hypothetical protein SEPMUDRAFT_123789 [Mycosphaerella populorum
SO2202]
Length = 1206
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 21/124 (16%)
Query: 157 CRYYMNTGTCKYGA-DCKFHHPKERIAQSAASNIG-----PLGLP-----SRPGQAICSN 205
CR++ GTCK+ A +C F H A A+ IG L LP PGQ C
Sbjct: 471 CRFWRE-GTCKHSAQNCSFAHS---FAAGDATKIGGEYASKLRLPPPDERYDPGQLRCHF 526
Query: 206 YSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASS 265
+ +GICK G C++ H Y PP + + Q + A ++ P +
Sbjct: 527 FRTHGICKRGAVCKYAHHDTPY------DAPPPGVTVEDVRASQLVYAQSTMSRDPQKTR 580
Query: 266 KIPN 269
K P+
Sbjct: 581 KRPD 584
>gi|449493048|ref|XP_004159177.1| PREDICTED: uncharacterized protein LOC101231961 [Cucumis sativus]
Length = 286
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 144 SSQNLP---ERPDQPDCRYYMNTGTCKYGADCKFHHP 177
S+ NLP +RP + DC +YM T TCK+G CKF HP
Sbjct: 151 STSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP 187
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 195 PSRPGQAICSNYSMYGICKFGPTCRFDHP 223
P RPG+ C++Y + CKFG +C+FDHP
Sbjct: 159 PQRPGEKDCAHYMLTRTCKFGDSCKFDHP 187
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHP 28
R EK C +YM T +CKFG +CKF HP
Sbjct: 161 RPGEKDCAHYMLTRTCKFGDSCKFDHP 187
>gi|255725390|ref|XP_002547624.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135515|gb|EER35069.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 254
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C +M TG C YG+ C+F H + + P S+P C+N+S YG C++G
Sbjct: 195 CASFMKTGVCPYGSKCQFAHGENELKHVDR----PPKWRSKP----CANWSKYGSCRYGN 246
Query: 217 TCRFDH 222
C F H
Sbjct: 247 RCCFKH 252
>gi|307186056|gb|EFN71788.1| Makorin-1 [Camponotus floridanus]
Length = 418
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR-PGQAICSNYSMYGICKFG 215
CRY+ N G C+ G +C++ H + + ++ A+ + P+ PG + + GICKFG
Sbjct: 11 CRYFKN-GACREGNNCRYRHAQ--VNRNDANINETVTTPTNSPGYIVTCRFFKQGICKFG 67
Query: 216 PTCRFDH 222
CRF H
Sbjct: 68 NQCRFSH 74
>gi|168005493|ref|XP_001755445.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693573|gb|EDQ79925.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL 194
LP+ +P C +++ TGTC+YG++C+F HP + A SA G L
Sbjct: 49 LPQDAKRPPCTFFLRTGTCQYGSECRFEHPVQPPAPSAPGPFGRFRL 95
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 3 QDEKS--CPYYMRTGSCKFGVACKFHHP-QPSSLGTALPLTGNASLGSM 48
QD K C +++RTG+C++G C+F HP QP + P G LG M
Sbjct: 51 QDAKRPPCTFFLRTGTCQYGSECRFEHPVQPPAPSAPGPF-GRFRLGLM 98
>gi|363751853|ref|XP_003646143.1| hypothetical protein Ecym_4262 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889778|gb|AET39326.1| hypothetical protein Ecym_4262 [Eremothecium cymbalariae
DBVPG#7215]
Length = 294
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 26/181 (14%)
Query: 58 LQYAGSLPTWSLQRAPYLSSR---LQGTQSYMPLIVS----PSQGIVPAPGWNTYM---- 106
++ G +P W LQR + G++S + + ++ P+ G +P N M
Sbjct: 70 VKVGGGVPGW-LQRCGGFGEEQGGVVGSESSLEVEINSQYRPANGTLPLTTENLAMLQHP 128
Query: 107 GNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQ-----PDCRYYM 161
G +AG + ++ G+ G A++ Q E+ ++ C +
Sbjct: 129 VREGEKESVVVAGVQQRHVTQEDGE-GRAAELDEQQQQQQQPQEKVNKTLYKTELCESFA 187
Query: 162 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 221
TG CKY C+F H + SN ++P C N+S G C++G C F
Sbjct: 188 TTGFCKYATKCQFAHGLHELKFKERSN----KFRTKP----CINWSTTGYCRYGKRCCFK 239
Query: 222 H 222
H
Sbjct: 240 H 240
>gi|241733215|ref|XP_002412317.1| hypothetical protein IscW_ISCW021372 [Ixodes scapularis]
gi|215505564|gb|EEC15058.1| hypothetical protein IscW_ISCW021372 [Ixodes scapularis]
Length = 382
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS-------AASNIGPLGLPS--RPGQAI 202
P QP CR++ N G C+Y C++ H + A ++ PS P + +
Sbjct: 69 PSQP-CRFFANHGHCRYRDRCRYSHGDVGVVSDHLDAETPEAEDVAKQKKPSSGEPTE-V 126
Query: 203 CSNYSMYGICKFGPTCRFDH 222
C Y G C+FG +CRF H
Sbjct: 127 CRFYERTGYCRFGRSCRFVH 146
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
CR+Y TG C++G C+F H + R A +G L +P Q SN
Sbjct: 127 CRFYERTGYCRFGRSCRFVH-RPRSKAKNARRVGKTALNCQPNQVADSN 174
>gi|163915111|ref|NP_001106542.1| ZFP36 ring finger protein [Xenopus (Silurana) tropicalis]
gi|159155749|gb|AAI54919.1| zfp36 protein [Xenopus (Silurana) tropicalis]
Length = 313
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TG CKYGA C+F H K + + N P + +C + +YG C +G
Sbjct: 109 CRTFSETGICKYGAKCQFAHGKIELRE---PNRHP-----KYKTELCHKFYLYGECPYGS 160
Query: 217 TCRFDH 222
C F H
Sbjct: 161 RCNFIH 166
>gi|5869806|emb|CAA76889.2| zinc finger protein [Danio rerio]
Length = 308
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 138 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS- 196
+H L P R + P CR + G C +G C F H + A PS
Sbjct: 110 VHNLKEQRPIRPRRRNVP-CRTFRAFGVCPFGTRCHFLHVEGGSESDGAEEEQTWQPPSQ 168
Query: 197 ----RPGQAICSNYSMYGICKFGPTCRFDH 222
+P A+C +S +G C +G CRF H
Sbjct: 169 SQEWKPRGALCRTFSAFGFCLYGTRCRFQH 198
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 213
C Y TGTCKY C+F H + L +PSR + +C Y G C
Sbjct: 54 CSRYAETGTCKYAERCQFAH-----------GLHDLHVPSRHPKYKTELCRTYHTAGYCV 102
Query: 214 FGPTCRFDH 222
+G C F H
Sbjct: 103 YGTRCLFVH 111
>gi|308801741|ref|XP_003078184.1| CCCH-type Zn-finger protein (ISS) [Ostreococcus tauri]
gi|116056635|emb|CAL52924.1| CCCH-type Zn-finger protein (ISS) [Ostreococcus tauri]
Length = 276
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTC+YG+ C+F H ++ + P+ + +C ++ G C +G
Sbjct: 113 CRSWEESGTCRYGSKCQFAHGRD--------ELRPVLRHPKYKTEVCRTFAAQGSCPYGS 164
Query: 217 TCRFDH 222
CRF H
Sbjct: 165 RCRFIH 170
>gi|330792528|ref|XP_003284340.1| hypothetical protein DICPUDRAFT_91287 [Dictyostelium purpureum]
gi|325085686|gb|EGC39088.1| hypothetical protein DICPUDRAFT_91287 [Dictyostelium purpureum]
Length = 442
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TG C+YG C+F H K+ + P+ + C + G C +G
Sbjct: 197 CRSFAETGVCRYGLKCQFAHGKDELR--------PVMRHPKYKTEACKTFYSVGSCPYGA 248
Query: 217 TCRFDH 222
CRF H
Sbjct: 249 RCRFIH 254
>gi|403338887|gb|EJY68686.1| Protein CPSF-4 [Oxytricha trifallax]
Length = 373
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSA------ASNIGPLGLPSRPGQAICSNY 206
P CRY++ G C G C F H P+E+ + +G + + IC NY
Sbjct: 59 PPCRYFIQDGVCSKGDKCVFRHVIPQEKRTEDCPYYERGFCRMGLFCTFNHIHKKICENY 118
Query: 207 SMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL--DSSLMNHQAISATHSIETSP 261
MYG C GP C +H + N +L L+ + + + A+ ATH + P
Sbjct: 119 -MYGFCPKGPDCEKEHIKSVIADN-DTTLKILANFPDNENWADKSALQATHQQQQQP 173
>gi|292623933|ref|XP_002665468.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Danio
rerio]
Length = 361
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 214
CR + +GTCKYGA C+F H E + GL P C + G C +
Sbjct: 148 CRTFEESGTCKYGAKCQFAHGMEELR----------GLNRHPKYKTEPCRTFHTIGFCPY 197
Query: 215 GPTCRFDH 222
G C F H
Sbjct: 198 GARCHFIH 205
>gi|168062631|ref|XP_001783282.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665200|gb|EDQ51892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 335
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TG C+Y A C+F H + ++ P+ + +C +Y+ G+C +G
Sbjct: 197 CRSWEETGHCRYAAKCQFAHGND--------DLRPVPRHPKYKTELCRSYTETGLCSYGK 248
Query: 217 TCRFDH 222
CRF H
Sbjct: 249 RCRFIH 254
>gi|350423562|ref|XP_003493520.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Bombus impatiens]
Length = 420
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+ N G C+ G +C++ H + I PS IC + +GICKFG
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTQGVWNDGNNETIISSSAPSMNN--IC-RFFKHGICKFGN 66
Query: 217 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKIPNWVQ 272
C F H + N + S+ +SS H + IS + +I+ + D WV+
Sbjct: 67 HCYFRHTTESFDNNV---VNANSVENSSAGQHTSNISTSTTIKIAKDNIRNAEEWVK 120
>gi|110762396|ref|XP_001121248.1| PREDICTED: hypothetical protein LOC725393 [Apis mellifera]
Length = 401
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 85 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 136
Query: 217 TCRFDHPY 224
C F H +
Sbjct: 137 RCHFIHNF 144
>gi|18858483|ref|NP_571014.1| cth1 [Danio rerio]
gi|5911474|emb|CAB55775.1| putative zinc finger protein [Danio rerio]
gi|79158856|gb|AAI07985.1| Cth1 [Danio rerio]
Length = 319
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 138 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS- 196
+H L P R + P CR + G C +G C F H + A PS
Sbjct: 121 VHNLKEQRPIRPRRRNVP-CRTFRAFGVCPFGNRCHFLHVEGGSESDGAEEEQTWQPPSQ 179
Query: 197 ----RPGQAICSNYSMYGICKFGPTCRFDH 222
+P A+C +S +G C +G CRF H
Sbjct: 180 SQEWKPRGALCRTFSAFGFCLYGTRCRFQH 209
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 213
C Y TGTCKY C+F H + L +PSR + +C Y G C
Sbjct: 65 CSRYAETGTCKYAERCQFAH-----------GLHDLHVPSRHPKYKTELCRTYHTAGYCV 113
Query: 214 FGPTCRFDH 222
+G C F H
Sbjct: 114 YGTRCLFVH 122
>gi|443704541|gb|ELU01558.1| hypothetical protein CAPTEDRAFT_157003 [Capitella teleta]
Length = 740
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIA-QSAASNIGPLGLPSRPGQAICSNYSMYGIC 212
+ DC + +TG C++G C++ H + + P+ P + + ICS + G C
Sbjct: 70 RKDCHVFRDTGICRFGNSCRYSHATTTDKDEEVKTEKKPVQKPKKEIR-ICSAFERTGKC 128
Query: 213 KFGPTCRFDH 222
++G CR+ H
Sbjct: 129 RYGEGCRYSH 138
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 9/93 (9%)
Query: 138 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN---IGPL-- 192
M S N P RP CR+Y G C G C + H ++ ++ + + P+
Sbjct: 1 MSTSSLQRSNSPTRPSDQICRFY-RKGICLRGTSCSYLHQSDQNHEAVIATPEAVDPVLD 59
Query: 193 ---GLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
+ C + GIC+FG +CR+ H
Sbjct: 60 PPQIQQQPKQRKDCHVFRDTGICRFGNSCRYSH 92
>gi|383857861|ref|XP_003704422.1| PREDICTED: uncharacterized protein LOC100877850 [Megachile
rotundata]
Length = 380
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 96 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 147
Query: 217 TCRFDHPY 224
C F H +
Sbjct: 148 RCHFIHNF 155
>gi|350422621|ref|XP_003493231.1| PREDICTED: hypothetical protein LOC100743445 [Bombus impatiens]
Length = 351
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 86 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 137
Query: 217 TCRFDHPY 224
C F H +
Sbjct: 138 RCHFIHNF 145
>gi|281206643|gb|EFA80829.1| hypothetical protein PPL_06417 [Polysphondylium pallidum PN500]
Length = 388
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TG C+YG C+F H ++ + P+ + C + G C +G
Sbjct: 158 CRSFAETGICRYGFKCQFAHGRDELR--------PVMRHPKYKTETCKTFHTVGSCPYGS 209
Query: 217 TCRFDH 222
CRF H
Sbjct: 210 RCRFIH 215
>gi|349802739|gb|AEQ16842.1| hypothetical protein [Pipa carvalhoi]
Length = 174
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TGTCKYGA C+F H K + + N P + +C Y +YG C +G
Sbjct: 112 CRTFSETGTCKYGAKCQFAHGKTELRE---PNRHP-----KYKTELCHKY-LYGECPYGT 162
Query: 217 TCRFDH 222
C F H
Sbjct: 163 RCNFIH 168
>gi|118400634|ref|XP_001032639.1| 50S ribosomal protein [Tetrahymena thermophila]
gi|89286982|gb|EAR84976.1| 50S ribosomal protein [Tetrahymena thermophila SB210]
Length = 1347
Score = 45.4 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRYY+ G C G +CKF H K+ +RP + +C N+ G CK G
Sbjct: 103 CRYYLQ-GNCTKGDECKFLHQKD-------------DGEARP-KKVCYNFQNTGFCKMGD 147
Query: 217 TCRFDH 222
C+F H
Sbjct: 148 RCKFSH 153
>gi|340723738|ref|XP_003400246.1| PREDICTED: hypothetical protein LOC100651220 [Bombus terrestris]
Length = 397
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 86 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 137
Query: 217 TCRFDHPY 224
C F H +
Sbjct: 138 RCHFIHNF 145
>gi|324518763|gb|ADY47198.1| Tristetraprolin, partial [Ascaris suum]
Length = 381
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +TG C YGA+C+F H + + + P P Q +C+ + G C +G
Sbjct: 167 CREFRDTGGCGYGAECRFAHGESEL------RLPPQAHPKYKTQ-LCNKFVWLGRCPYGS 219
Query: 217 TCRFDH 222
C+F H
Sbjct: 220 RCQFIH 225
>gi|260949487|ref|XP_002619040.1| hypothetical protein CLUG_00199 [Clavispora lusitaniae ATCC 42720]
gi|238846612|gb|EEQ36076.1| hypothetical protein CLUG_00199 [Clavispora lusitaniae ATCC 42720]
Length = 235
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C YM G C YGA C+F H + + S P S+P CSN++ YG C++G
Sbjct: 176 CVSYMKMGGCPYGAKCQFAHGEHDLK----SVPRPANYRSKP----CSNWAKYGSCRYGK 227
Query: 217 TCRFDH 222
C F H
Sbjct: 228 RCCFKH 233
>gi|154315641|ref|XP_001557143.1| predicted protein [Botryotinia fuckeliana B05.10]
Length = 739
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C++++ G CK+G DC+F HP A++ P+RP C N+ C++G
Sbjct: 31 CKHFVFYGECKWGLDCRFGHPARIHAENPE--------PTRPA---CKNFLSRRGCQYGW 79
Query: 217 TCRFDHPYA 225
C HP A
Sbjct: 80 KCHSHHPVA 88
>gi|448097279|ref|XP_004198630.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
gi|359380052|emb|CCE82293.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
Length = 328
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C Y+ TG C YG+ C+F H + + P S+P C+N+S +G C++G
Sbjct: 269 CASYVKTGVCPYGSKCQFAHGESELKHVDR----PPNWRSKP----CANWSKFGSCRYGS 320
Query: 217 TCRFDH 222
C F H
Sbjct: 321 RCCFKH 326
>gi|383851850|ref|XP_003701444.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Megachile rotundata]
Length = 417
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+ N G C+ G++C++ H +E I +N + S P + + +G+CKFG
Sbjct: 11 CRYFKN-GICREGSNCRYRHTQE-IGNDGNTN--ETVISSVPSFSSVCRFFKHGVCKFGN 66
Query: 217 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPD--ASSKIPNWVQNS 274
C F H P + D++L+N ++ + S + + + AS+ I N +N+
Sbjct: 67 QCHFRHN------------PEID--DNNLVNANSVENSSSGQQTSNTSASTTIKNVKENA 112
Query: 275 DAVSVQHQNPDM 286
A + P+
Sbjct: 113 HAAEEWVKAPEF 124
>gi|146165384|ref|XP_001014899.2| hypothetical protein TTHERM_00052030 [Tetrahymena thermophila]
gi|146145562|gb|EAR94717.2| hypothetical protein TTHERM_00052030 [Tetrahymena thermophila
SB210]
Length = 212
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+Y+ NTG C + C F H + + LP+ C N+ G C +G
Sbjct: 71 CKYWKNTGHCHFSDSCAFAHGYHEVREKTH-------LPNNYRTKKCKNFHEIGFCLYGE 123
Query: 217 TCRFDHPYAGYPINYG 232
C+F H P N+
Sbjct: 124 RCQFLHTVHKKPNNFA 139
>gi|320581641|gb|EFW95860.1| Member of the CCCH zinc finger family [Ogataea parapolymorpha DL-1]
Length = 423
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G+C YGA C+F H +E + + +N L C+N+ G C++G
Sbjct: 358 CTQFQEKGSCPYGAKCQFAHGEEELKKVKRANNWKTKL--------CANWLKAGSCRYGK 409
Query: 217 TCRFDH 222
C F H
Sbjct: 410 RCCFKH 415
>gi|303272789|ref|XP_003055756.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463730|gb|EEH61008.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 63
Score = 45.1 bits (105), Expect = 0.041, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TG C+YG C+F H ++ + P+ + +C ++ G C +G
Sbjct: 6 CRSWEETGACRYGVKCQFAHGRDELR--------PVLRHPKYKTEVCRTFAQNGTCPYGT 57
Query: 217 TCRFDH 222
CRF H
Sbjct: 58 RCRFIH 63
>gi|291240055|ref|XP_002739936.1| PREDICTED: zinc finger protein 36, C3H type-like 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 355
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 214
CR + GTCKYG C+F H + GL P +C + G C +
Sbjct: 106 CRPFEENGTCKYGDKCQFAHGDHELR----------GLSRHPKYKTELCRTFHTIGFCPY 155
Query: 215 GPTCRFDH 222
GP C F H
Sbjct: 156 GPRCHFIH 163
>gi|291240057|ref|XP_002739937.1| PREDICTED: zinc finger protein 36, C3H type-like 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 367
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 214
CR + GTCKYG C+F H + GL P +C + G C +
Sbjct: 118 CRPFEENGTCKYGDKCQFAHGDHELR----------GLSRHPKYKTELCRTFHTIGFCPY 167
Query: 215 GPTCRFDH 222
GP C F H
Sbjct: 168 GPRCHFIH 175
>gi|354548255|emb|CCE44992.1| hypothetical protein CPAR2_407950 [Candida parapsilosis]
Length = 265
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C +M TG+C YG C+F H + + + P + C+N+S YG C++G
Sbjct: 206 CGPFMKTGSCPYGLKCQFAH--------GEAELKHIERPPKWRSKPCANWSKYGSCRYGN 257
Query: 217 TCRFDH 222
C F H
Sbjct: 258 RCCFKH 263
>gi|72010393|ref|XP_782811.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like isoform
2 [Strongylocentrotus purpuratus]
Length = 386
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y GTCKYG C+F H + L + +C + G C +GP
Sbjct: 123 CRPYEENGTCKYGDKCQFAH--------GIHELRVLSRHPKYKTELCRTFHTVGFCPYGP 174
Query: 217 TCRFDH 222
C F H
Sbjct: 175 RCHFIH 180
>gi|17533629|ref|NP_496795.1| Protein MOE-3 [Caenorhabditis elegans]
gi|3876591|emb|CAB04229.1| Protein MOE-3 [Caenorhabditis elegans]
Length = 367
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA----ICSNYSMYGIC 212
C+ ++ + TC + +C+F H +E + P L SR +C Y+ G+C
Sbjct: 136 CQAWLESKTCTFAENCRFAHGEEELR--------PAKLESRQNNKYKTKLCDKYTTTGLC 187
Query: 213 KFGPTCRFDHP 223
+G C F HP
Sbjct: 188 PYGKRCLFIHP 198
>gi|393218795|gb|EJD04283.1| hypothetical protein FOMMEDRAFT_155406 [Fomitiporia mediterranea
MF3/22]
Length = 914
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTC+YG C+F H +E I + A + IC + + G C +G
Sbjct: 584 CRSWEEKGTCRYGPKCQFAHGEEEIRKVARH--------PKYKTEICRTFWVSGSCPYGK 635
Query: 217 TCRFDH---PYAGYP 228
C F H P +G P
Sbjct: 636 RCCFIHTELPTSGTP 650
>gi|414879023|tpg|DAA56154.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 71
Score = 45.1 bits (105), Expect = 0.049, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 199 GQAICSNYSMYGICKFGPTCRFDHPYAGYPINYG 232
G+ +C YS YGICKFG C+FDHP P+ Y
Sbjct: 5 GEELCKFYSRYGICKFGANCKFDHPTVVAPMVYA 38
Score = 37.4 bits (85), Expect = 9.4, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHP 28
Q E+ C +Y R G CKFG CKF HP
Sbjct: 4 QGEELCKFYSRYGICKFGANCKFDHP 29
>gi|324505301|gb|ADY42279.1| Tristetraprolin [Ascaris suum]
Length = 388
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 15/70 (21%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP----GQAICSNYSMYGIC 212
CR Y TG C YG C+F H G L LP + +C+ ++++G C
Sbjct: 158 CREYRGTGKCSYGDGCRFAH-----------GAGELRLPPQAHPKYKTQLCNKFALFGTC 206
Query: 213 KFGPTCRFDH 222
+G C+F H
Sbjct: 207 PYGARCQFIH 216
>gi|449688559|ref|XP_002159721.2| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Hydra
magnipapillata]
Length = 332
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 55/146 (37%), Gaps = 27/146 (18%)
Query: 82 TQSYMPLIVSPSQ-GIVPAPG--WNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 138
TQ ++SPS P P + + GN+ P + + S Q +L A +
Sbjct: 57 TQITKAQVLSPSSLSFYPMPSSPKDKFSGNVSPFRERAQSASF-------QEELDAQQRK 109
Query: 139 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
+ SS+ E CR + GTCKYG C+F H + GL P
Sbjct: 110 RNSTNSSRYKTEL-----CRPFEENGTCKYGDKCQFAHGFHELR----------GLNRHP 154
Query: 199 --GQAICSNYSMYGICKFGPTCRFDH 222
C Y G C +GP C F H
Sbjct: 155 KYKTEFCRTYHTIGFCPYGPRCHFIH 180
>gi|393910345|gb|EJD75831.1| hypothetical protein LOAG_17084 [Loa loa]
Length = 411
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ ++ +G C + +C+F H E + N P P + +C Y+M G+C +G
Sbjct: 162 CQAWLESGICSFAENCRFAHGDEELR---PCNRLPTKNPKYKTK-LCDKYTMAGLCPYGD 217
Query: 217 TCRFDHP 223
C F HP
Sbjct: 218 RCLFIHP 224
>gi|392571211|gb|EIW64383.1| hypothetical protein TRAVEDRAFT_158581 [Trametes versicolor
FP-101664 SS1]
Length = 280
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 210
P+C +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 117 PECWWYAKYGYCSAGDECLYAHPKERRVECPDYNRGFCKLGPTCPRKHVRRVACQLYLTG 176
Query: 211 ICKFGPTCRFDHPYAGYP 228
C GP C HP G P
Sbjct: 177 FCPLGPDCPRGHPKPGIP 194
>gi|395334665|gb|EJF67041.1| hypothetical protein DICSQDRAFT_96073 [Dichomitus squalens LYAD-421
SS1]
Length = 283
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 210
P+C +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 118 PECWWYAKYGYCSAGDECLYAHPKERKVECPDYNRGFCRLGPNCPRKHVRRVACQLYLTG 177
Query: 211 ICKFGPTCRFDHPYAGYP 228
C GP C HP G P
Sbjct: 178 FCPLGPDCPRGHPKPGIP 195
>gi|17540276|ref|NP_502931.1| Protein CCCH-2 [Caenorhabditis elegans]
gi|3876905|emb|CAB05191.1| Protein CCCH-2 [Caenorhabditis elegans]
Length = 186
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ + T C YG CKF H E + Q N G + P + +C N+S G CK+G
Sbjct: 78 CKTFQLTRACSYGEQCKFAHSVEEL-QLKQKNRG-VNHP-KYKTVLCDNFSRTGHCKYGT 134
Query: 217 TCRFDH 222
C+F H
Sbjct: 135 KCQFIH 140
>gi|392576362|gb|EIW69493.1| hypothetical protein TREMEDRAFT_68721 [Tremella mesenterica DSM
1558]
Length = 346
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRP----GQAICSNYSMY 209
P C +++ G C+ G +C ++HP++R + N G L P P + IC Y M
Sbjct: 128 PVCVWFVMAGKCELGGECLYYHPRDRRVECPDYNRGFCRLGPECPRRHIRRQICGAY-MA 186
Query: 210 GICKFGPTCRFDHP 223
G C GP C+ HP
Sbjct: 187 GFCPDGPNCKLAHP 200
>gi|241952458|ref|XP_002418951.1| zinc finger-containing regulatory protein, putative [Candida
dubliniensis CD36]
gi|223642290|emb|CAX44259.1| zinc finger-containing regulatory protein, putative [Candida
dubliniensis CD36]
Length = 202
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C +M TG C Y + C+F H S + + P + C+N+S YG C++G
Sbjct: 143 CASFMKTGVCPYASKCQFAH--------GESELKHVERPPKWRSKPCANWSKYGSCRYGN 194
Query: 217 TCRFDH 222
C F H
Sbjct: 195 RCCFKH 200
>gi|347840056|emb|CCD54628.1| hypothetical protein [Botryotinia fuckeliana]
Length = 398
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C++++ G CK+G DC+F HP A++ P+RP C N+ C++G
Sbjct: 31 CKHFVFYGECKWGLDCRFGHPARIHAENPE--------PTRPA---CKNFLSRRGCQYGW 79
Query: 217 TCRFDHPYA 225
C HP A
Sbjct: 80 KCHSHHPVA 88
>gi|320168070|gb|EFW44969.1| tRNA-dihydrouridine synthase 3 [Capsaspora owczarzaki ATCC 30864]
Length = 741
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 13/64 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ + GTC +G C+F H +E + + S+ P L YG CKFG
Sbjct: 157 CKQFAIKGTCSFGDKCRFVHEREANSDAVISDQCPFFL-------------QYGQCKFGL 203
Query: 217 TCRF 220
CRF
Sbjct: 204 ACRF 207
>gi|224073744|ref|XP_002304152.1| predicted protein [Populus trichocarpa]
gi|222841584|gb|EEE79131.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 20/127 (15%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHP-----KERIAQ---SAASNIGPLGLPSRPGQA-- 201
D+ CR + + C YG C+F H ++ + Q S+A +IG G S G
Sbjct: 99 EDKNLCRMFNSGKGCTYGNKCRFLHVVPENFQKNLGQNWESSAISIGTTGTASSGGHKKG 158
Query: 202 -----ICSNYSMYGICKFGPTCRFDH-----PYAGYPINYGLSLPPLSILDSSLMNHQAI 251
+C+N+ M G C +G C F H + I + P +S LM I
Sbjct: 159 YKKTRLCNNWEMTGGCPYGKVCHFAHGQQELEKSDGSIALASGIVPTKASNSLLMGKDGI 218
Query: 252 SATHSIE 258
+ H E
Sbjct: 219 GSNHKHE 225
>gi|392597302|gb|EIW86624.1| hypothetical protein CONPUDRAFT_134023 [Coniophora puteana
RWD-64-598 SS2]
Length = 292
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQ-----SAASNIGPLGLPSRPGQAICSNYSMY 209
P+C +Y G C G +C + HPKER A+ +GP+ + C Y +
Sbjct: 119 PECWWYAKYGYCSAGDECLYAHPKERRAECPDYRRGFCKLGPMCPRKHVRRVACQAY-LT 177
Query: 210 GICKFGPTCRFDHPYAG 226
G+C GP C HP G
Sbjct: 178 GLCPLGPECPRGHPKPG 194
>gi|336376373|gb|EGO04708.1| hypothetical protein SERLA73DRAFT_173919 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389412|gb|EGO30555.1| hypothetical protein SERLADRAFT_454858 [Serpula lacrymans var.
lacrymans S7.9]
Length = 344
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+C+YG+ C+F H +E I + A + IC + + G C +G
Sbjct: 29 CRSWEEKGSCRYGSKCQFAHGEEEIRKVARH--------PKYKTEICRTFWVSGACPYGK 80
Query: 217 TCRFDH 222
C F H
Sbjct: 81 RCCFIH 86
>gi|312084674|ref|XP_003144371.1| see oma family member [Loa loa]
Length = 341
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ ++ +G C + +C+F H E + N P P + +C Y+M G+C +G
Sbjct: 92 CQAWLESGICSFAENCRFAHGDEELR---PCNRLPTKNPKYKTK-LCDKYTMAGLCPYGD 147
Query: 217 TCRFDHP 223
C F HP
Sbjct: 148 RCLFIHP 154
>gi|168053987|ref|XP_001779415.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669213|gb|EDQ55805.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 552
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TG C+Y + C+F H ++ P+ + +C +Y+ G+C +G
Sbjct: 455 CRSWEETGYCRYASKCQFAH--------GNDDLRPVPRHPKYKTELCRSYTETGLCNYGK 506
Query: 217 TCRFDH 222
CRF H
Sbjct: 507 RCRFIH 512
>gi|432889388|ref|XP_004075252.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like [Oryzias
latipes]
Length = 390
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 214
CR Y +G+CKYGA C+F H E + GL P C + G C +
Sbjct: 151 CRTYEESGSCKYGAKCQFAHGLEELR----------GLSRHPKYKTEPCRTFHTIGFCPY 200
Query: 215 GPTCRFDH 222
G C F H
Sbjct: 201 GARCHFIH 208
>gi|146162775|ref|XP_001010054.2| tristetraproline, zinc finger protein [Tetrahymena thermophila]
gi|146146277|gb|EAR89809.2| tristetraproline, zinc finger protein [Tetrahymena thermophila
SB210]
Length = 294
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ + TGTCK+G C F H KE++ G + L C + + GIC +G
Sbjct: 130 CKNWTATGTCKFGDKCSFAHGKEQLQ-------GKIHLHPNYKTKPCKKFFIKGICSYGN 182
Query: 217 TCRFDH 222
C++ H
Sbjct: 183 RCQYIH 188
>gi|91080779|ref|XP_968440.1| PREDICTED: similar to Tis11-like protein [Tribolium castaneum]
Length = 250
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y G CKYG C+F H + + L + +C Y G C +GP
Sbjct: 102 CRPYEEFGVCKYGDKCQFAH--------GGAELRSLARHPKYKTELCRTYHTVGFCPYGP 153
Query: 217 TCRFDH 222
C F H
Sbjct: 154 RCHFVH 159
>gi|409083443|gb|EKM83800.1| hypothetical protein AGABI1DRAFT_33150 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 290
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMY 209
P+C ++ G C G +C + HPKER + N +GP+ P + + + +
Sbjct: 121 PECYWFAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPI-CPRKHVRKVACQLYLT 179
Query: 210 GICKFGPTCRFDHPYAGYPINYGLSLPP 237
G C GP C HP P+ PP
Sbjct: 180 GFCPMGPECPRGHPKPNLPLASAYEPPP 207
>gi|391331981|ref|XP_003740417.1| PREDICTED: uncharacterized protein LOC100906487 [Metaseiulus
occidentalis]
Length = 485
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H E + L + +C + G+C +GP
Sbjct: 178 CRPFEENGICKYGDKCQFAHGIEELRS--------LARHPKYKTELCRTFHTTGLCPYGP 229
Query: 217 TCRFDH 222
C F H
Sbjct: 230 RCHFIH 235
>gi|395334078|gb|EJF66454.1| hypothetical protein DICSQDRAFT_150954 [Dichomitus squalens
LYAD-421 SS1]
Length = 750
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTC+YGA C+F H +E + + + + IC + + G C +G
Sbjct: 438 CRSWEEKGTCRYGAKCQFAHGEEELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 489
Query: 217 TCRFDH 222
C F H
Sbjct: 490 RCCFIH 495
>gi|410927364|ref|XP_003977119.1| PREDICTED: uncharacterized protein LOC101065621 [Takifugu rubripes]
Length = 415
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 214
CR + TGTCKYG+ C+F H + + GL P C + +G C +
Sbjct: 153 CRGFQETGTCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTFYNFGYCPY 202
Query: 215 GPTCRFDH 222
G C F H
Sbjct: 203 GSRCHFIH 210
>gi|270005438|gb|EFA01886.1| hypothetical protein TcasGA2_TC007496 [Tribolium castaneum]
Length = 213
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y G CKYG C+F H + + L + +C Y G C +GP
Sbjct: 65 CRPYEEFGVCKYGDKCQFAH--------GGAELRSLARHPKYKTELCRTYHTVGFCPYGP 116
Query: 217 TCRFDH 222
C F H
Sbjct: 117 RCHFVH 122
>gi|17538616|ref|NP_501542.1| Protein OMA-1 [Caenorhabditis elegans]
gi|3874120|emb|CAA90977.1| Protein OMA-1 [Caenorhabditis elegans]
Length = 407
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ ++ + TC + +C+F H +E + + + PL ++ +C Y+ G+C +G
Sbjct: 118 CQAWLESKTCSFADNCRFAHGEEELRPTF---VEPLQ-NNKYKTKLCDKYTTTGLCPYGK 173
Query: 217 TCRFDHPYAG 226
C F HP G
Sbjct: 174 RCLFIHPDHG 183
>gi|390359026|ref|XP_793440.2| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Strongylocentrotus purpuratus]
Length = 628
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 209
ERP C ++ C++G CKF H +++ A +I P C N+ +
Sbjct: 109 ERP----CLDFLRGAGCRFGDKCKFSHDIQKLMAGKAPDINPR----------CINFDKF 154
Query: 210 GICKFGPTCRF 220
G C +G CRF
Sbjct: 155 GSCPYGMLCRF 165
>gi|156357309|ref|XP_001624163.1| predicted protein [Nematostella vectensis]
gi|156210922|gb|EDO32063.1| predicted protein [Nematostella vectensis]
Length = 70
Score = 43.9 bits (102), Expect = 0.099, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + Q L + +C + G C +GP
Sbjct: 9 CRPFEESGTCKYGDKCQFAHGYHELRQ--------LARHPKYKTELCRTFHTIGFCPYGP 60
Query: 217 TCRFDH 222
C F H
Sbjct: 61 RCHFIH 66
>gi|427781319|gb|JAA56111.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 368
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGDKCQFAH--------GGHELRTLARHPKYKTELCRTFHTAGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|302692746|ref|XP_003036052.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
gi|300109748|gb|EFJ01150.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
Length = 287
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 209
P+C +Y G C G +C + HPKER + G L PS P + I C NY +
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERRVECPDYKRGFCKLGPSCPRKHIRRIACQNY-LT 179
Query: 210 GICKFGPTCRFDHP 223
G C GP C HP
Sbjct: 180 GFCPLGPECPRGHP 193
>gi|118344116|ref|NP_001071879.1| zinc finger protein [Ciona intestinalis]
gi|70571730|dbj|BAE06810.1| zinc finger protein [Ciona intestinalis]
Length = 380
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 17/102 (16%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H K + + + + +C Y G C +GP
Sbjct: 136 CRPFEENGKCKYGDKCQFAHGKHELRR--------MVRHPKYKTELCRTYHTSGFCPYGP 187
Query: 217 TCRFDHPYAGYPINYGLSLP---------PLSILDSSLMNHQ 249
C F H I + P P+ I + L HQ
Sbjct: 188 RCHFIHNQEDVGIAKKQTQPTRIQSQTSVPVKINNRQLSQHQ 229
>gi|268567848|ref|XP_002647887.1| Hypothetical protein CBG23753 [Caenorhabditis briggsae]
gi|52548266|gb|AAU82117.1| POS-1 [Caenorhabditis briggsae]
Length = 271
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 28/103 (27%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 208
C Y + TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRSQTCSYGEQCRFAH-----------GVHELRLPQNPRGRNHPKYKTVLCDKFST 154
Query: 209 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAI 251
G CK+G C+F H P L +S ++N+ A+
Sbjct: 155 TGNCKYGTRCQFIHKIVN---------PTLLAQESGILNNTAV 188
>gi|17566742|ref|NP_505069.1| Protein OMA-2 [Caenorhabditis elegans]
gi|351049995|emb|CCD64069.1| Protein OMA-2 [Caenorhabditis elegans]
Length = 393
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAICSNYSMYGICK 213
C+ ++ + TC + +C+F H +E + S A N ++ +C Y+ G+C
Sbjct: 111 CQAWLESKTCAFAENCRFAHGEEELRPSLIEARQN-------NKYRTKLCDKYTTTGLCP 163
Query: 214 FGPTCRFDHPYAG 226
+G C F HP G
Sbjct: 164 YGKRCLFIHPDNG 176
>gi|389632125|ref|XP_003713715.1| CCCH zinc finger protein [Magnaporthe oryzae 70-15]
gi|351646048|gb|EHA53908.1| CCCH zinc finger protein [Magnaporthe oryzae 70-15]
Length = 452
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 23/107 (21%)
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
++ G SRN G + I+ A QN P R Q CR + TG+C G C++
Sbjct: 225 AVVGGVKFLRSRN----GNMVRHDIVKAQRQNGPVRKVQTPCRMFSTTGSCTKGPLCRYQ 280
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
H PL + AIC ++ + G C G +C H
Sbjct: 281 HD-------------PLKV------AICKDFLLKGDCIGGDSCDLSH 308
>gi|307947822|gb|ABV54790.2| Tis11-like protein [Ilyanassa obsoleta]
Length = 503
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G CKYG C+F H A + L + +C Y G C +GP
Sbjct: 152 CRPFEESGHCKYGDKCQFAH--------GAHELRNLSRHPKYKTELCRTYHSVGFCPYGP 203
Query: 217 TCRFDH 222
C F H
Sbjct: 204 RCHFIH 209
>gi|268535642|ref|XP_002632956.1| C. briggsae CBR-OMA-2 protein [Caenorhabditis briggsae]
Length = 379
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ ++ + TC + +C+F H +E + S I P ++ +C Y+ G+C +G
Sbjct: 95 CQAWLESKTCTFAENCRFAHGEEELRPSL---IEPRQ-NNKYKTKLCDKYTTTGLCPYGK 150
Query: 217 TCRFDHPYAG 226
C F HP G
Sbjct: 151 RCLFIHPDHG 160
>gi|225713900|gb|ACO12796.1| RING finger protein unkempt [Lepeophtheirus salmonis]
Length = 469
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 89/249 (35%), Gaps = 64/249 (25%)
Query: 8 CPYYMRTGSCKFGVACKFHH-----PQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAG 62
C ++ GSC FGVAC+F +P + L T L S + Q+A
Sbjct: 72 CAKFLSIGSCPFGVACRFARGVRELRKPKNKNNPLFKTTLCKLFSESGFCPNAVNCQFAH 131
Query: 63 SLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQ------GIVPAPGWNTYMG--------- 107
+ L+ P S L+ +SP + PG+ T +
Sbjct: 132 GVA--ELRSKPIDSFELES--------LSPEERQRRLEKAKNTPGYKTKICSKYREHNHC 181
Query: 108 NIGPLS-----PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMN 162
G L I G +L++ + N A + + CR M+
Sbjct: 182 EFGELCHFIHGNEVIPGIDLMHKNDNSNKFDATYKTTM----------------CRKIMS 225
Query: 163 TGTCKYGADCKFHHPKER------IAQSAASNIG---PLGLPSRPGQAICSNYSMYGICK 213
C+YG+ C+F H + ++ +A N L + +CSNY+ G CK
Sbjct: 226 KEMCEYGSKCRFAHSESELRKPLNVSMNAPHNTNYHNSLAFKT----VLCSNYTETGQCK 281
Query: 214 FGPTCRFDH 222
+G C+F H
Sbjct: 282 YGDNCQFAH 290
>gi|324508112|gb|ADY43428.1| Protein TIS11 [Ascaris suum]
Length = 305
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 133 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 192
G G Q +S+ P+ CR +M+ G C YG C++ H + P+
Sbjct: 39 GNGVQSSTISSQQPKNPKLYKTELCRSWMDHGRCNYGDRCQYAHGEHEKR--------PI 90
Query: 193 GLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
+ A C +Y G C +GP C F H
Sbjct: 91 PRHPKYKTAYCQSYHQSGYCPYGPRCHFIH 120
>gi|238883900|gb|EEQ47538.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 203
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C +M TG C Y C+F H + + P S+P C+N+S YG C++G
Sbjct: 144 CASFMKTGVCPYANKCQFAHGENELKHVER----PPKWRSKP----CANWSKYGSCRYGN 195
Query: 217 TCRFDH 222
C F H
Sbjct: 196 RCCFKH 201
>gi|401882106|gb|EJT46379.1| essential RNA-binding component of cleavage and polyadenylation
factor, Yth1p [Trichosporon asahii var. asahii CBS 2479]
gi|406700846|gb|EKD04008.1| essential RNA-binding component of cleavage and polyadenylation
factor, Yth1p [Trichosporon asahii var. asahii CBS 8904]
Length = 324
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 210
P C +++ G C+ G +C ++HPK+R + N G L P R + + G
Sbjct: 121 PTCVWFVKLGKCELGGECLYYHPKDRRVECPDYNRGFCRLGPECPRRHVRRTLCQAYLAG 180
Query: 211 ICKFGPTCRFDHPYAGYPINYGLSLPPL 238
C GP C+ HP P PP+
Sbjct: 181 FCPDGPDCKQAHPSPKLPDPESYVNPPV 208
>gi|391330077|ref|XP_003739491.1| PREDICTED: uncharacterized protein LOC100902394 [Metaseiulus
occidentalis]
Length = 354
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Query: 123 IYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA 182
+ + RN A ++ + N R CR + G CKYGA C+F H
Sbjct: 64 LQNRRNNMSDNADDNLNTTADGVSNRSSRYKTELCRPFEENGMCKYGARCQFAH------ 117
Query: 183 QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
A+ + L + +C + G+C +G C F H
Sbjct: 118 --GAAELRTLARHPKYKSQLCRTFHSNGLCPYGHRCHFIH 155
>gi|345497755|ref|XP_001599033.2| PREDICTED: hypothetical protein LOC100113609 [Nasonia vitripennis]
Length = 386
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G+CKYG C+F H + + L + +C + G C +GP
Sbjct: 84 CRPFEESGSCKYGDKCQFAH--------GYNELRNLARHPKYKTELCRTFHKIGFCPYGP 135
Query: 217 TCRFDHPY 224
C F H +
Sbjct: 136 RCHFVHNF 143
>gi|334312211|ref|XP_001382196.2| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like
[Monodelphis domestica]
Length = 516
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 165 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 216
Query: 217 TCRFDH 222
C F H
Sbjct: 217 RCHFIH 222
>gi|242210067|ref|XP_002470878.1| predicted protein [Postia placenta Mad-698-R]
gi|220730105|gb|EED83968.1| predicted protein [Postia placenta Mad-698-R]
Length = 213
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 210
PDC +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 107 PDCWWYAKYGYCSAGDECLYAHPKERRIECPDYNRGFCKLGPDCPRKHIRRVACQLYLTG 166
Query: 211 ICKFGPTCRFDHP 223
C GP C HP
Sbjct: 167 FCPLGPDCPRGHP 179
>gi|443685968|gb|ELT89404.1| hypothetical protein CAPTEDRAFT_193102 [Capitella teleta]
Length = 270
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 77/221 (34%), Gaps = 59/221 (26%)
Query: 2 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 61
R D ++C ++ + CKFG +C F H L G+A L + ++
Sbjct: 108 RNDTEACRFFAKYDWCKFGDSCHFSHAN---------LDGSADLPYQEQDLFDPEFFGFS 158
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
Y L+ SQG P WN +
Sbjct: 159 --------------------EDDYTELL---SQGFQP---WND--------------DHD 178
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 181
L+ + + G + S+ + ++P C ++ + G CKYGADC F H +
Sbjct: 179 LMTRALSVLHSGEDYDDDVYSSVGPSPAKKP----CFFFQDHGYCKYGADCCFSHD---V 231
Query: 182 AQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
A+ P R + I + + C++G CRF H
Sbjct: 232 PTGGATYTSP---QQRNTKDIPCRFFLNDSCRYGDQCRFSH 269
>gi|324510740|gb|ADY44489.1| Tristetraprolin [Ascaris suum]
Length = 455
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 213
C+ ++ C + +C+F H +E + P +P + + +C Y++ G+C
Sbjct: 193 CQAWVKNNRCNFAENCRFAHGEEELR--------PCKIPIKNAKYKTKLCDKYTLTGLCP 244
Query: 214 FGPTCRFDHPYA 225
+G C F HP A
Sbjct: 245 YGNRCLFIHPDA 256
>gi|365990802|ref|XP_003672230.1| hypothetical protein NDAI_0J00950 [Naumovozyma dairenensis CBS 421]
gi|343771005|emb|CCD26987.1| hypothetical protein NDAI_0J00950 [Naumovozyma dairenensis CBS 421]
Length = 411
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + GTCKYG C+F H + SN ++P C N++ G C +G
Sbjct: 293 CESFTTKGTCKYGNKCQFAHGLHELKLKQRSN----NFRTKP----CVNWAKLGYCPYGK 344
Query: 217 TCRFDH 222
C F H
Sbjct: 345 RCCFKH 350
>gi|307169532|gb|EFN62174.1| Protein TIS11 [Camponotus floridanus]
Length = 361
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y +G+CKYG C+F H + L + +C + G C +GP
Sbjct: 39 CRPYEESGSCKYGDKCQFAH--------GYGELRNLARHPKYKTELCRTFHTIGFCPYGP 90
Query: 217 TCRFDHPY 224
C F H +
Sbjct: 91 RCHFIHNF 98
>gi|170086075|ref|XP_001874261.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651813|gb|EDR16053.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 835
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTC+YGA C+F H ++ + + + + IC + + G C +G
Sbjct: 532 CRSWEEKGTCRYGAKCQFAHGEDELRK--------VSRHPKYKTEICRTFWVSGSCPYGK 583
Query: 217 TCRFDH---PYAGYPINYG 232
C F H P +G P G
Sbjct: 584 RCCFIHTELPSSGAPPTAG 602
>gi|2353340|gb|AAB69448.1| Tis11 family protein [Crassostrea virginica]
Length = 401
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G CKYG C+F H A + L + +C + G C +GP
Sbjct: 121 CRPFEESGHCKYGDKCQFAH--------GAHELRNLNRHPKYKTELCRTFHTIGFCPYGP 172
Query: 217 TCRFDH 222
C F H
Sbjct: 173 RCHFIH 178
>gi|302784404|ref|XP_002973974.1| hypothetical protein SELMODRAFT_16790 [Selaginella moellendorffii]
gi|300158306|gb|EFJ24929.1| hypothetical protein SELMODRAFT_16790 [Selaginella moellendorffii]
Length = 136
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHH------PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 210
C+ + G C YG C F H P A S AS PL +R +C+ + G
Sbjct: 63 CKRFFAEGVCPYGERCIFSHEDPAVKPAATTAISNASTAKPLNWKTR----LCNKWETTG 118
Query: 211 ICKFGPTCRFDHPYAG 226
C FG C F H AG
Sbjct: 119 SCPFGDKCHFAHGIAG 134
>gi|405960411|gb|EKC26337.1| Butyrate response factor 1 [Crassostrea gigas]
Length = 396
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G CKYG C+F H A + L + +C + G C +GP
Sbjct: 119 CRPFEESGHCKYGDKCQFAH--------GAHELRNLNRHPKYKTELCRTFHTIGFCPYGP 170
Query: 217 TCRFDH 222
C F H
Sbjct: 171 RCHFIH 176
>gi|334182942|ref|NP_174253.2| putative zinc finger CCCH domain-containing protein 10 [Arabidopsis
thaliana]
gi|380865369|sp|Q9C7P1.2|C3H10_ARATH RecName: Full=Putative zinc finger CCCH domain-containing protein
10; Short=AtC3H10
gi|332192988|gb|AEE31109.1| putative zinc finger CCCH domain-containing protein 10 [Arabidopsis
thaliana]
Length = 389
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 33/117 (28%)
Query: 120 SNLIYSSRNQGDLGAGAQMH-----------ILSASSQNLPERPDQPDCRYYMNTGTCKY 168
S L +R Q G+ ++M +LS++ P RP + +C +YM C++
Sbjct: 92 SRLWQRARTQDRRGSESRMMFDGRTQWSHAPVLSSA---YPVRPGEDNCLFYMKNHLCEW 148
Query: 169 GADCKFHHPKERIAQSAASNIGPL-GLPSRPGQAI-CSNYSMYGICKFGPTCRFDHP 223
G++C ++HP PL +P R G+ + C G CK G C F+HP
Sbjct: 149 GSECCYNHP-------------PLQEIPCRIGKKLDCK----AGACKRGSNCPFNHP 188
>gi|302694935|ref|XP_003037146.1| hypothetical protein SCHCODRAFT_80684 [Schizophyllum commune H4-8]
gi|300110843|gb|EFJ02244.1| hypothetical protein SCHCODRAFT_80684 [Schizophyllum commune H4-8]
Length = 735
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTC+YGA C+F H +E + + + IC + + G C +G
Sbjct: 438 CRSWEEKGTCRYGAKCQFAHGEEELRT--------VQRHPKYKTEICRTFWVSGSCPYGK 489
Query: 217 TCRFDH 222
C F H
Sbjct: 490 RCCFIH 495
>gi|302771343|ref|XP_002969090.1| hypothetical protein SELMODRAFT_16791 [Selaginella moellendorffii]
gi|300163595|gb|EFJ30206.1| hypothetical protein SELMODRAFT_16791 [Selaginella moellendorffii]
Length = 136
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHH------PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 210
C+ + G C YG C F H P A S AS PL +R +C+ + G
Sbjct: 63 CKRFFAEGVCPYGERCIFSHEDPAVKPAATTAISNASTAKPLNWKTR----LCNKWETTG 118
Query: 211 ICKFGPTCRFDHPYAG 226
C FG C F H AG
Sbjct: 119 SCPFGDKCHFAHGIAG 134
>gi|196016786|ref|XP_002118243.1| hypothetical protein TRIADDRAFT_33882 [Trichoplax adhaerens]
gi|190579144|gb|EDV19246.1| hypothetical protein TRIADDRAFT_33882 [Trichoplax adhaerens]
Length = 102
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C Y G C +GP
Sbjct: 41 CRPFEESGTCKYGDKCQFAH--------GIHELRALARHPKYKTELCRTYHTIGFCPYGP 92
Query: 217 TCRFDH 222
C F H
Sbjct: 93 RCHFIH 98
>gi|159117685|ref|XP_001709062.1| Zinc finger domain [Giardia lamblia ATCC 50803]
gi|157437177|gb|EDO81388.1| Zinc finger domain protein [Giardia lamblia ATCC 50803]
Length = 193
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
SI N+ S RN L G ++SS + + +C + G C YG C+F
Sbjct: 2 SIVMRNMESSLRNAESLAVGQ-----TSSSTGAKYKTEFCNC--FAEFGRCDYGDRCQFA 54
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
H E SN+ + L C+++ +G C +G C F H
Sbjct: 55 HSMEEFQHRRRSNVKDMKL--------CTDFITHGYCPYGRRCNFLH 93
>gi|388856515|emb|CCF49821.1| uncharacterized protein [Ustilago hordei]
Length = 681
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 14/70 (20%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 214
P C +Y+ G C+ G C + H + L G IC N+S YG C+
Sbjct: 390 PHCVHYLRAGKCRNGKQCFYTHSDK--------------LKDGTGTKICRNFSDYGWCER 435
Query: 215 GPTCRFDHPY 224
G C H Y
Sbjct: 436 GKDCEERHTY 445
>gi|308474554|ref|XP_003099498.1| hypothetical protein CRE_01134 [Caenorhabditis remanei]
gi|308266687|gb|EFP10640.1| hypothetical protein CRE_01134 [Caenorhabditis remanei]
Length = 356
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ ++ + TC + +C+F H +E + S I P ++ +C Y+ G+C +G
Sbjct: 83 CQAWLESKTCTFAENCRFAHGEEELR---PSFIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 138
Query: 217 TCRFDHPYAG 226
C F HP G
Sbjct: 139 RCLFIHPDHG 148
>gi|449550650|gb|EMD41614.1| hypothetical protein CERSUDRAFT_128533 [Ceriporiopsis subvermispora
B]
Length = 780
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+C+YGA C+F H +E + + + + IC + + G C +G
Sbjct: 470 CRSWEEKGSCRYGAKCQFAHGEEELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 521
Query: 217 TCRFDH---PYAGYP 228
C F H P +G P
Sbjct: 522 RCCFIHTELPASGAP 536
>gi|344288823|ref|XP_003416146.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Loxodonta
africana]
Length = 497
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 217 TCRFDH 222
C F H
Sbjct: 213 RCHFIH 218
>gi|347840920|emb|CCD55492.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1169
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 147 NLPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 204
LP D P C Y+ + +C G DCK H +A N L + ++PG C
Sbjct: 449 RLPASVDGPQWVCYYWYHDNSCTKGVDCKMAH--------SADN--DLRVAAKPGSVTC- 497
Query: 205 NYSMYGICKFGPTCRFDH--PYAGYPINYGLSLPPLSILDSSLMNHQAI 251
Y + G C+ G C F H P+ G I+Y S P +++DS + +++
Sbjct: 498 RYWIQGHCRNGIDCFFAHESPHNGRSISYT-SQPYSNVIDSEPLVEKSV 545
>gi|448524536|ref|XP_003871522.1| hypothetical protein CORT_0C07300 [Candida orthopsilosis Co 90-125]
gi|380353344|emb|CCG26100.1| hypothetical protein CORT_0C07300 [Candida orthopsilosis]
Length = 293
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C +M TG C YG C+F H + + + P + C+N++ YG C++G
Sbjct: 234 CGPFMKTGNCPYGHKCQFAHGQAELKH--------IERPPKWRSKPCANWAKYGSCRYGN 285
Query: 217 TCRFDH 222
C F H
Sbjct: 286 RCCFKH 291
>gi|322799634|gb|EFZ20906.1| hypothetical protein SINV_11495 [Solenopsis invicta]
Length = 388
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 8/68 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y G+CKYG C+F H + L + +C + G C +GP
Sbjct: 72 CRPYEENGSCKYGDKCQFAH--------GYGELRNLARHPKYKTELCRTFHTIGFCPYGP 123
Query: 217 TCRFDHPY 224
C F H +
Sbjct: 124 RCHFIHNF 131
>gi|223649040|gb|ACN11278.1| Butyrate response factor 1 [Salmo salar]
Length = 400
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 214
CR Y +GTCKYGA C+F H + GL P C + G C +
Sbjct: 162 CRTYEESGTCKYGAKCQFAHGMDEQR----------GLSRHPKYKTEPCRTFHTIGFCPY 211
Query: 215 GPTCRFDH 222
G C F H
Sbjct: 212 GARCHFIH 219
>gi|308161222|gb|EFO63678.1| Zinc finger domain-containing protein [Giardia lamblia P15]
Length = 193
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
SI N+ S RN L G ++SS + + +C + G C YG C+F
Sbjct: 2 SIVMRNIESSLRNVESLAVGQ-----TSSSTGAKYKTEFCNC--FAEFGRCDYGDRCQFA 54
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
H E SN+ + L C+++ +G C +G C F H
Sbjct: 55 HSMEEFQHRRRSNVKDMKL--------CTDFITHGYCPYGRRCNFLH 93
>gi|224143966|ref|XP_002325139.1| AP2 domain-containing transcription factor [Populus trichocarpa]
gi|222866573|gb|EEF03704.1| AP2 domain-containing transcription factor [Populus trichocarpa]
Length = 549
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 151 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 184
RP+ D YMN GT K+GA+CKF+HP R Q+
Sbjct: 422 RPEAKDRASYMNIGTYKFGANCKFNHPIRRKNQA 455
>gi|57526296|ref|NP_001009765.1| tristetraprolin [Ovis aries]
gi|54036437|sp|Q6S9E0.1|TTP_SHEEP RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Zinc finger
protein 36 homolog; Short=Zfp-36
gi|39777543|gb|AAR31111.1| tristetraprolin [Ovis aries]
Length = 325
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 213
CR + +G C+YGA C+F H +G L PSR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQPSRHPKYKTELCHKFYLQGRCP 155
Query: 214 FGPTCRFDH 222
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|294874524|ref|XP_002766999.1| hypothetical protein Pmar_PMAR010979 [Perkinsus marinus ATCC 50983]
gi|239868374|gb|EEQ99716.1| hypothetical protein Pmar_PMAR010979 [Perkinsus marinus ATCC 50983]
Length = 463
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHH---PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
CR + +G C++G CKF H P+++I P +C Y+ C+
Sbjct: 40 CRDWRRSGKCRFGDKCKFAHIDSPEKKIEDDKKRAAKEKERP------VCRYYAAGKNCR 93
Query: 214 FGPTCRFDH 222
FG CR+ H
Sbjct: 94 FGERCRYRH 102
>gi|146218585|gb|AAI39895.1| Zgc:162730 protein [Danio rerio]
Length = 336
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+CKYGA C+F H + + G P QA C + +G C +G
Sbjct: 118 CRSFQEHGSCKYGAKCQFAHGENELR-------GLYRHPKYKTQA-CRTFYQFGYCPYGS 169
Query: 217 TCRFDH 222
C F H
Sbjct: 170 RCHFIH 175
>gi|115313847|gb|AAI24447.1| Zgc:162730 protein [Danio rerio]
Length = 335
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+CKYGA C+F H + + G P QA C + +G C +G
Sbjct: 117 CRSFQEHGSCKYGAKCQFAHGENELR-------GLYRHPKYKTQA-CRTFYQFGYCPYGS 168
Query: 217 TCRFDH 222
C F H
Sbjct: 169 RCHFIH 174
>gi|253735916|gb|ACT34179.1| ZFP36 [Ovis aries]
Length = 325
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 213
CR + +G C+YGA C+F H +G L PSR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQPSRHPKYKTELCHKFYLQGRCP 155
Query: 214 FGPTCRFDH 222
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|324521953|gb|ADY47962.1| Tristetraprolin [Ascaris suum]
Length = 203
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +TG C YG CKF H +E + + + P R A C Y + G C +G
Sbjct: 59 CRAWTDTGRCNYGNKCKFAHGEEDLRKLPPEPVKVYNNP-RYRTAPCLKYRLLGSCPYGD 117
Query: 217 TCRFDH 222
C + H
Sbjct: 118 RCSYIH 123
>gi|19113245|ref|NP_596453.1| zinc finger protein [Schizosaccharomyces pombe 972h-]
gi|1731429|sp|P47979.1|ZFS1_SCHPO RecName: Full=Zinc finger protein zfs1; AltName: Full=Multicopy
suppressor of overexpressed cyr1 protein 4
gi|755103|dbj|BAA08654.1| zinc-finger protein [Schizosaccharomyces pombe]
gi|7106064|emb|CAB75997.1| CCCH tandem zinc finger protein, human Tristetraprolin homolog
Zfs1, involved in mRNA catabolism [Schizosaccharomyces
pombe]
Length = 404
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ + +GTC+YG+ C+F H + + + P P + C ++ MYG C +G
Sbjct: 332 CKNWQISGTCRYGSKCQFAHGNQELKE-------PPRHPKYKSER-CRSFMMYGYCPYGL 383
Query: 217 TCRFDH 222
C F H
Sbjct: 384 RCCFLH 389
>gi|111226448|ref|XP_637949.2| hypothetical protein DDB_G0285973 [Dictyostelium discoideum AX4]
gi|90970577|gb|EAL64445.2| hypothetical protein DDB_G0285973 [Dictyostelium discoideum AX4]
Length = 437
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + TG C+YG C+F H ++ + + P + C + G C +G
Sbjct: 201 CRSFQETGVCRYGLKCQFAHGRDELR-------SVMRHPKYKTET-CKTFYSIGSCPYGS 252
Query: 217 TCRFDH 222
CRF H
Sbjct: 253 RCRFIH 258
>gi|389742287|gb|EIM83474.1| hypothetical protein STEHIDRAFT_160055 [Stereum hirsutum FP-91666
SS1]
Length = 803
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTC+YG C+F H +E I + + + IC + + G C +G
Sbjct: 487 CRSWEEKGTCRYGPKCQFAHGEEEIRK--------VSRHPKYKTEICRTFWVSGSCPYGK 538
Query: 217 TCRFDH 222
C F H
Sbjct: 539 RCCFIH 544
>gi|348541959|ref|XP_003458454.1| PREDICTED: hypothetical protein LOC100700871 [Oreochromis
niloticus]
Length = 300
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGP----LGLPSR--- 197
NL R + P CR + G C +G C F H K+ + +N+G + P R
Sbjct: 130 NLRRRRNVP-CRTFRAFGICPFGTRCNFLHVEGKDEDGRHDLANVGEKTSLVQNPQRHQK 188
Query: 198 -----PGQAICSNYSMYGICKFGPTCRFDH 222
P A+C +S +G C +G C F H
Sbjct: 189 TKGWKPRGALCRTFSAFGFCLYGTRCHFQH 218
>gi|308509954|ref|XP_003117160.1| CRE-MOE-3 protein [Caenorhabditis remanei]
gi|308242074|gb|EFO86026.1| CRE-MOE-3 protein [Caenorhabditis remanei]
Length = 383
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ ++ + TC + +C+F H ++ + S I P ++ +C Y+ G+C +G
Sbjct: 144 CQAWLESKTCTFAENCRFAHGEDELR---PSKIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 199
Query: 217 TCRFDHPYAG 226
C F HP G
Sbjct: 200 RCLFIHPDHG 209
>gi|395514832|ref|XP_003761616.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Sarcophilus harrisii]
Length = 211
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 213
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 68 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 125
Query: 214 FGPTCRFDHPYAGYPI 229
GP+C+F HP P+
Sbjct: 126 EGPSCKFMHPRFELPM 141
>gi|426201512|gb|EKV51435.1| hypothetical protein AGABI2DRAFT_62161 [Agaricus bisporus var.
bisporus H97]
Length = 290
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMY 209
P+C ++ G C G +C + HPKER + N +GP+ P + + + +
Sbjct: 121 PECYWFAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPI-CPRKHVRKVACQLYLT 179
Query: 210 GICKFGPTCRFDHPYAGYPI 229
G C GP C HP P+
Sbjct: 180 GFCPMGPECPRGHPKPNLPL 199
>gi|410926251|ref|XP_003976592.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Takifugu
rubripes]
Length = 398
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 214
CR Y +GTCKYG C+F H + + G+ P +C + G C +
Sbjct: 157 CRTYEESGTCKYGTKCQFAHGLDELR----------GISRHPKYKTELCRTFHTIGFCPY 206
Query: 215 GPTCRFDH 222
G C F H
Sbjct: 207 GARCHFVH 214
>gi|307111265|gb|EFN59500.1| expressed protein [Chlorella variabilis]
Length = 594
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 26/67 (38%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C +++ TGTC YG CKF HP ++ + C FG
Sbjct: 389 CAFFLKTGTCAYGDSCKFAHPFDKAPKV--------------------------DCAFGH 422
Query: 217 TCRFDHP 223
TC+F HP
Sbjct: 423 TCKFHHP 429
>gi|255083106|ref|XP_002504539.1| superfamily I helicase [Micromonas sp. RCC299]
gi|226519807|gb|ACO65797.1| superfamily I helicase [Micromonas sp. RCC299]
Length = 1155
Score = 42.7 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 22/81 (27%)
Query: 149 PERPDQPD----CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 204
PE P QPD CR ++ G C YG+DC+F H K A+S + +C
Sbjct: 1054 PENP-QPDNQRVCREWL-AGKCLYGSDCRFAHEKRYDAKS---------------KKLCR 1096
Query: 205 NYSMYGICKFGPTCRFDHPYA 225
++ M G C G C F H A
Sbjct: 1097 DF-MMGKCHRGAECVFSHDTA 1116
>gi|348688082|gb|EGZ27896.1| hypothetical protein PHYSODRAFT_353449 [Phytophthora sojae]
Length = 250
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C++Y G+C+YG+ C+F H +E + G L P + C + G C +G
Sbjct: 48 CKHYTENGSCRYGSKCQFAHGEEELR-------GVLRHP-KYKTTRCKAFMSTGKCMYGS 99
Query: 217 TCRFDH 222
CRF H
Sbjct: 100 RCRFIH 105
>gi|348523051|ref|XP_003449037.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like
[Oreochromis niloticus]
Length = 422
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 214
CR Y +G CKYGA C+F H + + GL P C + G C +
Sbjct: 174 CRTYEESGACKYGAKCQFAHGMDELR----------GLNRHPKYKTEPCRTFHTIGFCPY 223
Query: 215 GPTCRFDH 222
G C F H
Sbjct: 224 GARCHFIH 231
>gi|110751353|ref|XP_001121251.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1 [Apis mellifera]
Length = 415
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 157 CRYYMNTGTCKYGADCKFHHPK--------ERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
CRY+ N G C+ G +C++ H + E I S+AS++ +C + +
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTQGIWNDGNNETIISSSASSMN----------TVCRFFKL 59
Query: 209 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKI 267
GICKFG C F H N + SI SS H + IS +I+ D +S
Sbjct: 60 -GICKFGNQCYFRHSTETVDNNL---VNANSIESSSPGQHTSNISTPTTIKNVKDNTSIA 115
Query: 268 PNWVQ 272
WV+
Sbjct: 116 EEWVK 120
>gi|431912731|gb|ELK14749.1| Butyrate response factor 2 [Pteropus alecto]
Length = 446
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 111 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 162
Query: 217 TCRFDH 222
C F H
Sbjct: 163 RCHFIH 168
>gi|410897635|ref|XP_003962304.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Takifugu
rubripes]
Length = 370
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 42/114 (36%), Gaps = 34/114 (29%)
Query: 109 IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 168
+GP SPT GS + SSR + +L CR + G+CKY
Sbjct: 127 LGPASPT--GGSGQVNSSRYKTEL------------------------CRPFEENGSCKY 160
Query: 169 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G C+F H + L + +C + G C +GP C F H
Sbjct: 161 GDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGPRCHFIH 206
>gi|30466247|ref|NP_848671.1| cleavage and polyadenylation specificity factor subunit 4 [Mus
musculus]
gi|348568560|ref|XP_003470066.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 3 [Cavia porcellus]
gi|37999672|sp|Q8BQZ5.1|CPSF4_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit; AltName: Full=Clipper homolog; AltName:
Full=Clipper/CPSF 30K
gi|26337803|dbj|BAC32587.1| unnamed protein product [Mus musculus]
Length = 211
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 213
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 68 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 125
Query: 214 FGPTCRFDHPYAGYPI 229
GP+C+F HP P+
Sbjct: 126 EGPSCKFMHPRFELPM 141
>gi|390604243|gb|EIN13634.1| hypothetical protein PUNSTDRAFT_117353 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 814
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTC+YG C+F H +E + A + IC + + G C +G
Sbjct: 509 CRSWEEKGTCRYGTKCQFAHGEEELRVVARH--------PKYKTEICRTFWVSGSCPYGK 560
Query: 217 TCRFDH 222
C F H
Sbjct: 561 RCCFIH 566
>gi|444322576|ref|XP_004181929.1| hypothetical protein TBLA_0H01230 [Tetrapisispora blattae CBS 6284]
gi|387514975|emb|CCH62410.1| hypothetical protein TBLA_0H01230 [Tetrapisispora blattae CBS 6284]
Length = 348
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + GTCKYG C+F H + S+ ++P C+N+ G C +G
Sbjct: 253 CETFTTKGTCKYGNKCQFAHGLHELNFKNISS----NFRTKP----CNNWEKLGYCPYGK 304
Query: 217 TCRFDH 222
C+F H
Sbjct: 305 RCQFKH 310
>gi|68477649|ref|XP_717137.1| hypothetical protein CaO19.5334 [Candida albicans SC5314]
gi|68477812|ref|XP_717058.1| hypothetical protein CaO19.12794 [Candida albicans SC5314]
gi|46438755|gb|EAK98081.1| hypothetical protein CaO19.12794 [Candida albicans SC5314]
gi|46438837|gb|EAK98162.1| hypothetical protein CaO19.5334 [Candida albicans SC5314]
Length = 203
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C +M TG C Y C+F H + + P S+P C+N++ YG C++G
Sbjct: 144 CASFMKTGVCPYANKCQFAHGENELKHVER----PPKWRSKP----CANWTKYGSCRYGN 195
Query: 217 TCRFDH 222
C F H
Sbjct: 196 RCCFKH 201
>gi|308490987|ref|XP_003107685.1| hypothetical protein CRE_13265 [Caenorhabditis remanei]
gi|308250554|gb|EFO94506.1| hypothetical protein CRE_13265 [Caenorhabditis remanei]
Length = 387
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ ++ + TC + +C+F H +E + S I P ++ +C Y+ G+C +G
Sbjct: 110 CQAWLESKTCTFAENCRFAHGEEELR---PSFIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 165
Query: 217 TCRFDHPYAG 226
C F HP G
Sbjct: 166 RCLFIHPDNG 175
>gi|294658177|ref|XP_460514.2| DEHA2F03410p [Debaryomyces hansenii CBS767]
gi|202952931|emb|CAG88827.2| DEHA2F03410p [Debaryomyces hansenii CBS767]
Length = 287
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C Y+ G C YG C+F H + + + P S+P C+N+S +G C++G
Sbjct: 228 CASYIKMGICPYGNKCQFAHGENELKSVSR----PPKWRSKP----CANWSKFGSCRYGN 279
Query: 217 TCRFDH 222
C F H
Sbjct: 280 RCCFKH 285
>gi|15220486|ref|NP_174250.1| putative zinc finger CCCH domain-containing protein 9 [Arabidopsis
thaliana]
gi|75268252|sp|Q9C7P4.1|C3H9_ARATH RecName: Full=Putative zinc finger CCCH domain-containing protein
9; Short=AtC3H9
gi|12323526|gb|AAG51738.1|AC068667_17 zinc finger protein, putative; 78337-80281 [Arabidopsis thaliana]
gi|332192984|gb|AEE31105.1| putative zinc finger CCCH domain-containing protein 9 [Arabidopsis
thaliana]
Length = 321
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER 180
P RP + DC++Y+ G C+Y + C+F+HP +R
Sbjct: 53 PVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQR 84
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 178 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
KER+ QS+ P RPG+ C Y G+C++ +CRF+HP
Sbjct: 43 KERMRQSSP-------YPVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
>gi|359320685|ref|XP_003639394.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Canis
lupus familiaris]
Length = 491
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 163 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 214
Query: 217 TCRFDH 222
C F H
Sbjct: 215 RCHFIH 220
>gi|5731751|emb|CAA71245.2| CTH1 protein [Cyprinus carpio]
Length = 327
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 157 CRYYMNTGTCKYGADCKFHHPK---ERIAQSAASNIGPLGLPS--RPGQAICSNYSMYGI 211
CR + G C +G C F H + E P+ +P A+C +S +G
Sbjct: 137 CRTFRAFGVCPFGTRCHFLHVEGGSESDGGEEEQTCQPMSQSQEWKPRGALCRTFSAFGF 196
Query: 212 CKFGPTCRFDH 222
C +G CRF H
Sbjct: 197 CLYGTRCRFQH 207
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 61/170 (35%), Gaps = 28/170 (16%)
Query: 64 LPTWSLQRAPY-----LSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIA 118
PT L A + S L ++ +PL+ SPS + P W L
Sbjct: 12 FPTEGLNEAFFPEEGLASGSLSLAKALLPLVESPSPPMTP---WLCSTRYKTELCSRYAE 68
Query: 119 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH-- 176
Y+ R Q G +H L S++ + + CR Y G C YG C F H
Sbjct: 69 TGTCKYAERCQFAHG----LHDLHVPSRHPKYKTEL--CRTYHTAGYCVYGTRCLFVHNL 122
Query: 177 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 226
++R + N+ C + +G+C FG C F H G
Sbjct: 123 KEQRPVRQRCRNVP------------CRTFRAFGVCPFGTRCHFLHVEGG 160
>gi|170085227|ref|XP_001873837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651389|gb|EDR15629.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 292
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 210
P+C ++ G C G +C + HPKER + N G L P + + + + G
Sbjct: 121 PECWWFAKYGYCSAGDECLYAHPKERRVECPDYNRGFCKLGPSCPRKHVRKVACQLYLTG 180
Query: 211 ICKFGPTCRFDHPYAGYP 228
C GP C HP P
Sbjct: 181 FCPLGPECLRGHPKPDLP 198
>gi|344302417|gb|EGW32691.1| hypothetical protein SPAPADRAFT_60049 [Spathaspora passalidarum
NRRL Y-27907]
Length = 353
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C +M G C YG C+F H + + P S+P C N++ YG C++G
Sbjct: 294 CASFMKMGICPYGNKCQFAHGENELKVVER----PPKWRSKP----CVNWAKYGSCRYGN 345
Query: 217 TCRFDH 222
C F H
Sbjct: 346 RCCFKH 351
>gi|148687046|gb|EDL18993.1| cleavage and polyadenylation specific factor 4, isoform CRA_b [Mus
musculus]
Length = 251
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 213
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 92 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 149
Query: 214 FGPTCRFDHPYAGYPI 229
GP+C+F HP P+
Sbjct: 150 EGPSCKFMHPRFELPM 165
>gi|12323533|gb|AAG51745.1|AC068667_24 zinc finger protein, putative; 86473-88078 [Arabidopsis thaliana]
Length = 287
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 120 SNLIYSSRNQGDLGAGAQMHILSAS--------SQNLPERPDQPDCRYYMNTGTCKYGAD 171
S L +R Q G+ ++M + S P RP + +C +YM C++G++
Sbjct: 92 SRLWQRARTQDRRGSESRMMFDGRTQWSHAPVLSSAYPVRPGEDNCLFYMKNHLCEWGSE 151
Query: 172 CKFHHPKERIAQSAASNIGPL-GLPSRPGQAI-CSNYSMYGICKFGPTCRFDHP 223
C ++HP PL +P R G+ + C G CK G C F+HP
Sbjct: 152 CCYNHP-------------PLQEIPCRIGKKLDCK----AGACKRGSNCPFNHP 188
>gi|313235948|emb|CBY25091.1| unnamed protein product [Oikopleura dioica]
Length = 288
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +TG C+YG C+F H ++ + L + +C ++ G+C +G
Sbjct: 52 CRSWDDTGFCRYGKKCQFAHSQKELRN--------LMRHPKYKTEMCDSFHTVGVCPYGN 103
Query: 217 TCRFDH 222
C F H
Sbjct: 104 RCHFVH 109
>gi|170092415|ref|XP_001877429.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647288|gb|EDR11532.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 2289
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA------ICSNYS 207
+P C+Y C+ GA+CKF H I+ S + P G S P ++ +C+ Y
Sbjct: 4 RPTCKYLNTPRGCRQGANCKFSHDSSAISNSPVAR--PSGSQSSPARSHNTPAGVCNFYW 61
Query: 208 MYGICKFGPTCRFDH 222
G C G CRF H
Sbjct: 62 SRGDCNRGFECRFKH 76
>gi|47204423|emb|CAG14799.1| unnamed protein product [Tetraodon nigroviridis]
Length = 477
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 214
CR Y +GTCKYG C+F H + + G+ P +C + G C +
Sbjct: 153 CRTYEESGTCKYGTKCQFAHGVDELR----------GISRHPKYKTELCRTFHTIGFCPY 202
Query: 215 GPTCRFDH 222
G C F H
Sbjct: 203 GARCHFIH 210
>gi|268531842|ref|XP_002631049.1| C. briggsae CBR-MOE-3 protein [Caenorhabditis briggsae]
Length = 357
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ ++ + TC + +C+F H ++ + S I P ++ +C Y+ G+C +G
Sbjct: 120 CQAWLESKTCNFAENCRFAHGEDELR---PSKIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 175
Query: 217 TCRFDHPYAG 226
C F HP G
Sbjct: 176 RCLFIHPDHG 185
>gi|145533841|ref|XP_001452665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420364|emb|CAK85268.1| unnamed protein product [Paramecium tetraurelia]
Length = 198
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+Y+ C YG C F H + I Q +P +C NY G C +G
Sbjct: 97 CKYWAIEDYCPYGQQCAFAHGQHEIRQKTH-------VPHNYKTQVCKNYITIGYCCYGE 149
Query: 217 TCRFDHP 223
C+F HP
Sbjct: 150 RCQFKHP 156
>gi|432937814|ref|XP_004082483.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like, partial
[Oryzias latipes]
Length = 411
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 209 CRPFEENGSCKYGDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGP 260
Query: 217 TCRFDH 222
C F H
Sbjct: 261 RCHFIH 266
>gi|300794488|ref|NP_001178120.1| zinc finger protein 36, C3H1 type-like 2 [Bos taurus]
Length = 485
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 155 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 206
Query: 217 TCRFDH 222
C F H
Sbjct: 207 RCHFIH 212
>gi|339256988|ref|XP_003370127.1| conserved hypothetical protein [Trichinella spiralis]
gi|316964971|gb|EFV49843.1| conserved hypothetical protein [Trichinella spiralis]
Length = 181
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY++N C++G++C F H + S N P C N +G CK+GP
Sbjct: 35 CRYFVNGPGCRFGSNCFFAHNLVELRPSMYRNFLYKTEP-------CRNLRTWGHCKYGP 87
Query: 217 TCRFDH 222
C + H
Sbjct: 88 RCLYLH 93
>gi|348680071|gb|EGZ19887.1| hypothetical protein PHYSODRAFT_489640 [Phytophthora sojae]
Length = 536
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + N G C GA C+F H + ++ AS + + + Q++C N+ G C G
Sbjct: 400 CRNFQN-GRCMRGASCRFAHTGQVAQEAPASAVEEVSEYQKRFQSVCYNWQRGGSCVRGD 458
Query: 217 TCRFDHPYA 225
C F H A
Sbjct: 459 NCSFQHDGA 467
>gi|313228137|emb|CBY23287.1| unnamed protein product [Oikopleura dioica]
Length = 404
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y TG C+YG C+F H + + L + +C ++ G C +G
Sbjct: 138 CRSYEETGNCRYGKKCQFAH--------SVKEVRVLNRHPKYKTEMCKSFHTNGYCPYGA 189
Query: 217 TCRFDH 222
C F H
Sbjct: 190 RCHFVH 195
>gi|330797093|ref|XP_003286597.1| hypothetical protein DICPUDRAFT_31125 [Dictyostelium purpureum]
gi|325083422|gb|EGC36875.1| hypothetical protein DICPUDRAFT_31125 [Dictyostelium purpureum]
Length = 561
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + + C+YG CKF H E ++ ++G C +Y YG CKFG
Sbjct: 2 CDKMVQSEKCEYGDKCKFSHNVEEYLKTKPKSLGK-----------CLSYEAYGKCKFGI 50
Query: 217 TCRF--DH 222
C F DH
Sbjct: 51 NCYFGEDH 58
>gi|296223994|ref|XP_002757880.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like
[Callithrix jacchus]
Length = 857
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 521 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 572
Query: 217 TCRFDH 222
C F H
Sbjct: 573 RCHFIH 578
>gi|417401900|gb|JAA47814.1| Putative zinc finger protein 36 c3h1 type-like 2 [Desmodus
rotundus]
Length = 496
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 162 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 213
Query: 217 TCRFDH 222
C F H
Sbjct: 214 RCHFIH 219
>gi|145344880|ref|XP_001416952.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577178|gb|ABO95245.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 72
Score = 42.4 bits (98), Expect = 0.28, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G+C+YGA C+F H ++ + P+ + +C ++ G C +G
Sbjct: 15 CRSWEESGSCRYGAKCQFAHGRDELR--------PVLRHPKYKTEVCRTFAAQGNCPYGS 66
Query: 217 TCRFDH 222
CRF H
Sbjct: 67 RCRFIH 72
>gi|74144555|dbj|BAE36112.1| unnamed protein product [Mus musculus]
Length = 568
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 245 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 296
Query: 217 TCRFDH 222
C F H
Sbjct: 297 RCHFIH 302
>gi|355778689|gb|EHH63725.1| hypothetical protein EGM_16749 [Macaca fascicularis]
Length = 338
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 202
S Q P R CR + G CKYG C+F H + L + +
Sbjct: 106 GSGQGNPSRYKTELCRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTEL 157
Query: 203 CSNYSMYGICKFGPTCRFDH 222
C + G C +GP C F H
Sbjct: 158 CRTFHTIGFCPYGPRCHFIH 177
>gi|268554124|ref|XP_002635049.1| C. briggsae CBR-POS-1 protein [Caenorhabditis briggsae]
gi|52548268|gb|AAU82118.1| POS-1 [Caenorhabditis briggsae]
Length = 263
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 19/74 (25%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 208
C Y + TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRSATCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 209 YGICKFGPTCRFDH 222
G CK+G C+F H
Sbjct: 155 TGNCKYGTRCQFIH 168
>gi|311252736|ref|XP_003125238.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Sus
scrofa]
Length = 493
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|417411287|gb|JAA52088.1| Putative zinc finger protein 36 c3h1 type-like 2, partial [Desmodus
rotundus]
Length = 507
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 145 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 196
Query: 217 TCRFDH 222
C F H
Sbjct: 197 RCHFIH 202
>gi|149050529|gb|EDM02702.1| zinc finger protein 36, C3H type-like 2 [Rattus norvegicus]
Length = 400
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 157 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 208
Query: 217 TCRFDH 222
C F H
Sbjct: 209 RCHFIH 214
>gi|402890699|ref|XP_003908616.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Papio anubis]
gi|384949034|gb|AFI38122.1| zinc finger protein 36, C3H1 type-like 2 [Macaca mulatta]
gi|387542100|gb|AFJ71677.1| zinc finger protein 36, C3H1 type-like 2 [Macaca mulatta]
Length = 492
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|402471238|gb|EJW05085.1| hypothetical protein EDEG_00798 [Edhazardia aedis USNM 41457]
Length = 293
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y +TG CKYG C+F H K + ++ AIC ++ + C +G
Sbjct: 52 CRNYEDTGFCKYGDKCQFAHNKNELRYKTRHHLYKT--------AICRSFWVNNYCPYGK 103
Query: 217 TCRFDH 222
C F H
Sbjct: 104 RCCFIH 109
>gi|47212350|emb|CAF93268.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 214
CR + TGTCKYG+ C+F H + + GL P C + +G C +
Sbjct: 143 CRGFQETGTCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTFYNFGYCPY 192
Query: 215 GPTCRFDH 222
G C F H
Sbjct: 193 GSRCHFIH 200
>gi|403213677|emb|CCK68179.1| hypothetical protein KNAG_0A05120 [Kazachstania naganishii CBS
8797]
Length = 290
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G CKYG C+F H + +N ++P C+N+ G C +G
Sbjct: 180 CESFTTKGFCKYGNKCQFAHGLHELNFKTFTN----NFRTKP----CNNWQKLGYCPYGK 231
Query: 217 TCRFDH 222
CRF H
Sbjct: 232 RCRFKH 237
>gi|348508156|ref|XP_003441621.1| PREDICTED: hypothetical protein LOC100704231 [Oreochromis
niloticus]
Length = 404
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 214
CR + TG+CKYG+ C+F H + + GL P C + +G C +
Sbjct: 141 CRGFQETGSCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTFYNFGYCPY 190
Query: 215 GPTCRFDH 222
G C F H
Sbjct: 191 GSRCHFIH 198
>gi|302805284|ref|XP_002984393.1| hypothetical protein SELMODRAFT_445909 [Selaginella moellendorffii]
gi|300147781|gb|EFJ14443.1| hypothetical protein SELMODRAFT_445909 [Selaginella moellendorffii]
Length = 624
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C ++ G+C+ G++C++ H + A SAA++ LP PG C N+ G C+ G
Sbjct: 343 CYDFITKGSCERGSECRYLHSSDENASSAAAD-NEQQLP--PGS--CFNFFKKGSCEKGD 397
Query: 217 TCRFDH 222
CRF H
Sbjct: 398 DCRFSH 403
>gi|296482648|tpg|DAA24763.1| TPA: zinc finger protein 36, C3H type-like 2 [Bos taurus]
Length = 486
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 155 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 206
Query: 217 TCRFDH 222
C F H
Sbjct: 207 RCHFIH 212
>gi|147904354|ref|NP_001080610.1| zinc finger protein 36, C3H1 type-like 2-A [Xenopus laevis]
gi|82176684|sp|Q7ZXW9.1|TISDA_XENLA RecName: Full=Zinc finger protein 36, C3H1 type-like 2-A; AltName:
Full=CCCH zinc finger protein 3; Short=XC3H-3
gi|28278580|gb|AAH44086.1| Zfp36l2-prov protein [Xenopus laevis]
Length = 363
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G CKYG C+F H + L + +C + G C +GP
Sbjct: 137 CRPFEESGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 188
Query: 217 TCRFDH 222
C F H
Sbjct: 189 RCHFIH 194
>gi|302687148|ref|XP_003033254.1| hypothetical protein SCHCODRAFT_256806 [Schizophyllum commune H4-8]
gi|300106948|gb|EFI98351.1| hypothetical protein SCHCODRAFT_256806 [Schizophyllum commune H4-8]
Length = 1239
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 22/91 (24%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERI-------------------AQSAASNIGPL 192
P Q CR+++ GTC +G +C++ H E S+ S+ P
Sbjct: 197 PGQDVCRFWLK-GTCMHGKNCRYKHSNESRNVFDKSPAPRGNSTSRASPRGSSTSSPAPW 255
Query: 193 GL-PSRPGQAICSNYSMYGICKFGPTCRFDH 222
G S PG+ +C + + G CK+G +CR++H
Sbjct: 256 GSSASAPGRDVC-RFWLKGDCKYGNSCRYEH 285
>gi|294901008|ref|XP_002777208.1| hypothetical protein Pmar_PMAR007113 [Perkinsus marinus ATCC 50983]
gi|239884700|gb|EER09024.1| hypothetical protein Pmar_PMAR007113 [Perkinsus marinus ATCC 50983]
Length = 433
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G C++G CKF H ++ RP +C Y+ C+FG
Sbjct: 40 CRDWRRNGKCRFGDKCKFAHIDSPEKKTEDDKKRAAKEKERP---VCRYYAAGKNCRFGE 96
Query: 217 TCRFDH 222
CR+ H
Sbjct: 97 RCRYRH 102
>gi|392570407|gb|EIW63580.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 2341
Score = 42.0 bits (97), Expect = 0.33, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 15/83 (18%)
Query: 151 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL-GLPSRP----------G 199
R +P CR+Y G CK G+ C F H I ++ S G G P +P
Sbjct: 5 RNHRPPCRFYSKPGGCKNGSSCTFAH----IDGASPSPPGQFQGGPRQPFVPRPPVPNAP 60
Query: 200 QAICSNYSMYGICKFGPTCRFDH 222
+C Y G C G CRF H
Sbjct: 61 PGVCKFYYDRGFCSRGSDCRFRH 83
>gi|159477867|ref|XP_001697030.1| hypothetical protein CHLREDRAFT_192634 [Chlamydomonas reinhardtii]
gi|158274942|gb|EDP00722.1| predicted protein [Chlamydomonas reinhardtii]
Length = 272
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 181 IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPLS 239
++ SA + P+G P R + C++Y G C FGPTC+++HP G +YGL PP +
Sbjct: 83 LSLSAPNPPPPVGYPVRAEEPDCAHYLKKGWCAFGPTCKYNHPEIVGGLSSYGLGQPPTA 142
Query: 240 ILD 242
+
Sbjct: 143 YVS 145
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPK 178
P R ++PDC +Y+ G C +G CK++HP+
Sbjct: 97 PVRAEEPDCAHYLKKGWCAFGPTCKYNHPE 126
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQP----SSLGTALPLTGNASL 45
+R +E C +Y++ G C FG CK++HP+ SS G P T SL
Sbjct: 98 VRAEEPDCAHYLKKGWCAFGPTCKYNHPEIVGGLSSYGLGQPPTAYVSL 146
>gi|341875115|gb|EGT31050.1| hypothetical protein CAEBREN_24850 [Caenorhabditis brenneri]
Length = 265
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 19/77 (24%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 208
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 209 YGICKFGPTCRFDHPYA 225
G CK+G C+F H A
Sbjct: 155 TGNCKYGTRCQFIHKLA 171
>gi|403414935|emb|CCM01635.1| predicted protein [Fibroporia radiculosa]
Length = 2146
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTC+Y A C+F H +E + + + + IC + + G C +G
Sbjct: 1842 CRSWEEKGTCRYSAKCQFAHGEEELRKVSRH--------PKYKTEICRTFWVSGSCPYGK 1893
Query: 217 TCRFDH 222
C F H
Sbjct: 1894 RCCFIH 1899
>gi|114577167|ref|XP_515435.2| PREDICTED: zinc finger protein 36, C3H type-like 2 [Pan
troglodytes]
gi|410267656|gb|JAA21794.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
gi|410267658|gb|JAA21795.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
Length = 491
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|348510817|ref|XP_003442941.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like
[Oreochromis niloticus]
Length = 372
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 149 CRPFEENGSCKYGDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGP 200
Query: 217 TCRFDH 222
C F H
Sbjct: 201 RCHFIH 206
>gi|410351521|gb|JAA42364.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
gi|410351523|gb|JAA42365.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
Length = 491
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|395829566|ref|XP_003787923.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Otolemur
garnettii]
Length = 495
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 217 TCRFDH 222
C F H
Sbjct: 213 RCHFIH 218
>gi|66801291|ref|XP_629571.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|74850928|sp|Q54CU9.1|DUS3L_DICDI RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=tRNA-dihydrouridine synthase 3-like
gi|60462949|gb|EAL61146.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 671
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 27/104 (25%)
Query: 165 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 224
C++ CKF H E+ S +IG IC N+ YG CK+G C F +
Sbjct: 113 VCEFNETCKFSHDVEKYLASKPKSIG-----------ICQNFQTYGECKYGLNCYFGECH 161
Query: 225 AGYPINYGLSLPPLSILDS-SLMNHQAISATHSIETSPDASSKI 267
I+D+ +++N + I ++T + S++I
Sbjct: 162 ---------------IVDNKTIVNKELIGKVEPVKTLNEVSNEI 190
>gi|397475530|ref|XP_003809188.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 36, C3H1
type-like 2, partial [Pan paniscus]
Length = 475
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 289 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 340
Query: 217 TCRFDH 222
C F H
Sbjct: 341 RCHFIH 346
>gi|403374207|gb|EJY87042.1| Tristetraproline, zinc finger protein [Oxytricha trifallax]
Length = 542
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G CK+ C F H K + + + LPS IC+ + C +G
Sbjct: 360 CRNWEISGKCKFMDSCSFAHGKHEL-------VKKVHLPSNYKTKICTQFHTTAFCPYGN 412
Query: 217 TCRFDH 222
C+F H
Sbjct: 413 RCQFLH 418
>gi|49249965|ref|NP_001001806.1| zinc finger protein 36, C3H1 type-like 2 [Mus musculus]
gi|223460781|gb|AAI39417.1| Zinc finger protein 36, C3H type-like 2 [Mus musculus]
Length = 484
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 217 TCRFDH 222
C F H
Sbjct: 213 RCHFIH 218
>gi|74218063|dbj|BAE42014.1| unnamed protein product [Mus musculus]
Length = 484
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 217 TCRFDH 222
C F H
Sbjct: 213 RCHFIH 218
>gi|402594222|gb|EJW88148.1| hypothetical protein WUBG_00943 [Wuchereria bancrofti]
Length = 394
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + +TG C YG C+F H + + AA P + +C+ +++YG+C +G
Sbjct: 166 CNAFRDTGQCAYGFHCRFAHGIDEL--RAAPGPHP-----KYKTRLCNKFTLYGLCPYGS 218
Query: 217 TCRFDH 222
C+F H
Sbjct: 219 HCQFIH 224
>gi|62857339|ref|NP_001016822.1| zinc finger protein 36, C3H type-like 2, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89273981|emb|CAJ81284.1| zinc finger protein 36 C3H type like 2 [Xenopus (Silurana)
tropicalis]
Length = 271
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 23/86 (26%)
Query: 141 LSASSQNLPER----PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 196
+S + LP R P + CR + + G C YGA C F HPK
Sbjct: 118 VSPDAPRLPTRKYAGPYRERCRLWRSPGGCPYGARCHFQHPKS----------------- 160
Query: 197 RPGQAICSNYSMYGICKFGPTCRFDH 222
+ +C +++ G C +G C F H
Sbjct: 161 --SREVCRHFAALGDCPYGARCHFSH 184
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGIC 212
CR + GTC YG C F H + +S S P LP+R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERRESPVSPDAPR-LPTRKYAGPYRERCRLWRSPGGC 147
Query: 213 KFGPTCRFDHP 223
+G C F HP
Sbjct: 148 PYGARCHFQHP 158
>gi|424512981|emb|CCO66565.1| predicted protein [Bathycoccus prasinos]
Length = 524
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR ++ TG C+Y C+F H ++ + + P Q +C Y+ G C +G
Sbjct: 332 CRSWIETGECRYNDKCQFAHGRDELR-------CVVRHPKYKTQ-VCRTYTTTGQCPYGN 383
Query: 217 TCRFDH 222
CRF H
Sbjct: 384 RCRFIH 389
>gi|60652785|gb|AAX29087.1| zinc finger protein 36 C3H type-like 2 [synthetic construct]
Length = 498
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|15812178|ref|NP_008818.3| zinc finger protein 36, C3H1 type-like 2 [Homo sapiens]
gi|146291085|sp|P47974.3|TISD_HUMAN RecName: Full=Zinc finger protein 36, C3H1 type-like 2;
Short=ZFP36-like 2; AltName: Full=Butyrate response
factor 2; AltName: Full=EGF-response factor 2;
Short=ERF-2; AltName: Full=Protein TIS11D
gi|62822444|gb|AAY14992.1| unknown [Homo sapiens]
gi|119620711|gb|EAX00306.1| zinc finger protein 36, C3H type-like 2, isoform CRA_b [Homo
sapiens]
Length = 494
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|13477111|gb|AAH05010.1| ZFP36L2 protein [Homo sapiens]
gi|123993447|gb|ABM84325.1| zinc finger protein 36, C3H type-like 2 [synthetic construct]
gi|124000545|gb|ABM87781.1| zinc finger protein 36, C3H type-like 2 [synthetic construct]
Length = 497
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|357624170|gb|EHJ75049.1| hypothetical protein KGM_19145 [Danaus plexippus]
Length = 265
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 112 CRPFEEAGVCKYGDKCQFAH--------GVRELRNLQRHPKYKTELCRTFHSVGFCPYGP 163
Query: 217 TCRFDH 222
C F H
Sbjct: 164 RCHFVH 169
>gi|118404606|ref|NP_001072758.1| ZFP36 ring finger protein-like 1 [Xenopus (Silurana) tropicalis]
gi|116487406|gb|AAI25787.1| hypothetical protein MGC147385 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 8/105 (7%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGSCKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 217 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSP 261
C F H + G S+ SS M + + S P
Sbjct: 173 RCHFIHNAEERRLVSGRDQAQFSLSSSSKMERPRLQHSFSFAGFP 217
>gi|168061106|ref|XP_001782532.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666017|gb|EDQ52684.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
QD+++CP+Y++TG C+FGV C HP + T L
Sbjct: 1 QDKRNCPFYIKTGVCRFGVRCSRLHPVFNEACTLL 35
>gi|301617734|ref|XP_002938300.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Xenopus (Silurana)
tropicalis]
Length = 529
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
+D +CP+Y++TG+C+FG C H PSS T L + + G
Sbjct: 156 KDRANCPFYLKTGACRFGERCSRKHNYPSSSQTLLIRSMFVTFG 199
>gi|509778|emb|CAA55592.1| ERF-2 [Homo sapiens]
Length = 492
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|170585736|ref|XP_001897638.1| Zinc finger C-x8-C-x5-C-x3-H type containing protein [Brugia
malayi]
gi|158594945|gb|EDP33522.1| Zinc finger C-x8-C-x5-C-x3-H type containing protein, putative
[Brugia malayi]
Length = 355
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 37/122 (30%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+ N C+ GA C F H + S+P + Y + G C FG
Sbjct: 23 CRYFAN-NICREGASCPFSHDRN----------------SKPDRT--CRYYLIGKCDFGT 63
Query: 217 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA 276
+CR+DH PPL + +A+ + SP+A+ + N NS+
Sbjct: 64 SCRYDH-----------KRPPLDGV-------KAVKSVARTTGSPNATKVVENGCSNSEG 105
Query: 277 VS 278
V+
Sbjct: 106 VT 107
>gi|195478028|ref|XP_002100381.1| GE17025 [Drosophila yakuba]
gi|194187905|gb|EDX01489.1| GE17025 [Drosophila yakuba]
Length = 448
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 21/112 (18%)
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGA 170
S+L+ + N G++ +H +Q+ P P QP CR + G CKYG
Sbjct: 110 SSLVTITENLGNMN----LHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGE 165
Query: 171 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
C+F H + + + + C + G C +GP C F H
Sbjct: 166 KCQFAH--------GSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 209
>gi|79750234|ref|NP_001031703.1| butyrate response factor 2 [Rattus norvegicus]
Length = 482
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 157 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 208
Query: 217 TCRFDH 222
C F H
Sbjct: 209 RCHFIH 214
>gi|393218484|gb|EJD03972.1| hypothetical protein FOMMEDRAFT_133331 [Fomitiporia mediterranea
MF3/22]
Length = 292
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQ-----SAASNIGPLGLPSRPGQAICSNYSMY 209
P+C +Y G C+ G +C + HPKE+ + +GP + C NY +
Sbjct: 119 PECWWYAKFGYCQAGDECLYAHPKEKKIECPDYKRGFCKLGPHCPRKHVRRVACQNY-LT 177
Query: 210 GICKFGPTCRFDHPYAGYP 228
G C GP C HP P
Sbjct: 178 GYCPLGPECTRGHPKPDLP 196
>gi|392349170|ref|XP_003750309.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Rattus
norvegicus]
Length = 482
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 157 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 208
Query: 217 TCRFDH 222
C F H
Sbjct: 209 RCHFIH 214
>gi|17562800|ref|NP_505172.1| Protein POS-1 [Caenorhabditis elegans]
gi|3767590|dbj|BAA33854.1| cytoplasmic zinc-finger protein [Caenorhabditis elegans]
gi|373254396|emb|CCD70802.1| Protein POS-1 [Caenorhabditis elegans]
Length = 264
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 19/74 (25%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 208
C Y + C YG C+F H + L LP P +C +SM
Sbjct: 104 CDAYKRSQACSYGDQCRFAH-----------GVHELRLPMNPRGRNHPKYKTVLCDKFSM 152
Query: 209 YGICKFGPTCRFDH 222
G CK+G C+F H
Sbjct: 153 TGNCKYGTRCQFIH 166
>gi|41054479|ref|NP_955943.1| zinc finger protein 36, C3H type-like 1b [Danio rerio]
gi|39645454|gb|AAH63991.1| Zinc finger protein 36, C3H type-like 1 like [Danio rerio]
Length = 348
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTCKYG C+F H + L + +C + G C +GP
Sbjct: 143 CRPFEENGTCKYGDKCQFAH--------GMHELRSLNRHPKYKTELCRTFHSIGYCPYGP 194
Query: 217 TCRFDH 222
C F H
Sbjct: 195 RCHFIH 200
>gi|162287133|ref|NP_001089645.1| ZFP36 ring finger protein-like 1 [Xenopus laevis]
gi|71681229|gb|AAI00163.1| MGC114600 protein [Xenopus laevis]
Length = 345
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGSCKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 217 TCRFDH 222
C F H
Sbjct: 173 RCHFIH 178
>gi|984509|gb|AAA91778.1| Tis11d [Homo sapiens]
Length = 482
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|46015500|pdb|1RGO|A Chain A, Structural Basis For Recognition Of The Mrna Class Ii Au-
Rich Element By The Tandem Zinc Finger Domain Of Tis11d
Length = 70
Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 9 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 60
Query: 217 TCRFDH 222
C F H
Sbjct: 61 RCHFIH 66
>gi|328771087|gb|EGF81127.1| hypothetical protein BATDEDRAFT_10653 [Batrachochytrium
dendrobatidis JAM81]
Length = 624
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/134 (19%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + C G++CK+ H + ++GP +C +++ G CKFG
Sbjct: 112 CNKFATGEQCNLGSNCKYSHDIQAYLAEKELDLGP----------VCPQFALLGECKFGI 161
Query: 217 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQ--NS 274
CRF + N ++ L+ D + N S I+ ++ ++Q ++
Sbjct: 162 KCRFSKAHTDAEGNQMVAEKKLN-EDQFIKNCSTKSIIQDIKQKNIDCTRSKEFIQWWSA 220
Query: 275 DAVSVQHQNPDMKN 288
+ + +Q + ++K
Sbjct: 221 EEIKLQQRLNELKK 234
>gi|135865|sp|P23949.1|TISD_MOUSE RecName: Full=Zinc finger protein 36, C3H1 type-like 2;
Short=ZFP36-like 2; AltName: Full=Butyrate response
factor 2; AltName: Full=Protein TIS11D
gi|202067|gb|AAA72946.1| TIS11 primary response gene [Mus musculus]
Length = 367
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 132 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 183
Query: 217 TCRFDH 222
C F H
Sbjct: 184 RCHFIH 189
>gi|426335364|ref|XP_004029195.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Gorilla
gorilla gorilla]
Length = 464
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|148234376|ref|NP_001084214.1| ZFP36 ring finger protein-like 1 [Xenopus laevis]
gi|4580022|gb|AAD24208.1|AF061981_1 CCCH zinc finger protein C3H-2 [Xenopus laevis]
gi|54038156|gb|AAH84197.1| C3H-2 protein [Xenopus laevis]
Length = 345
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGSCKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 217 TCRFDH 222
C F H
Sbjct: 173 RCHFIH 178
>gi|223649192|gb|ACN11354.1| Butyrate response factor 1 [Salmo salar]
Length = 400
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHH---PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
CR Y +GTCKYGA C+F H + +++ P C + G C
Sbjct: 162 CRTYEESGTCKYGAKCQFAHGTDEQRDLSRHPKYKTEP-----------CRTFHTIGFCP 210
Query: 214 FGPTCRFDH 222
+G C F H
Sbjct: 211 YGARCHFIH 219
>gi|95769571|gb|ABF57445.1| butyrate response factor 2 [Bos taurus]
Length = 318
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 155 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 206
Query: 217 TCRFDH 222
C F H
Sbjct: 207 RCHFIH 212
>gi|167535049|ref|XP_001749199.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772352|gb|EDQ86005.1| predicted protein [Monosiga brevicollis MX1]
Length = 468
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPK 178
+P C++++ TGTC+YG DC F HP+
Sbjct: 89 KPQCKHWLRTGTCRYGTDCFFLHPE 113
>gi|444705919|gb|ELW47297.1| Thyroid adenoma-associated protein [Tupaia chinensis]
Length = 2301
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 1896 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 1947
Query: 217 TCRFDHP 223
C F P
Sbjct: 1948 RCHFIPP 1954
>gi|290985913|ref|XP_002675669.1| predicted protein [Naegleria gruberi]
gi|284089267|gb|EFC42925.1| predicted protein [Naegleria gruberi]
Length = 299
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 14/84 (16%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ- 200
+ +S N +R CR + TG C+YG C+F H + L L +R +
Sbjct: 176 NQASYNGKDRYKTELCRSWEETGYCRYGDKCQFAHGRHE-----------LRLVTRHHKY 224
Query: 201 --AICSNYSMYGICKFGPTCRFDH 222
+C+NY G C +G C F H
Sbjct: 225 KSELCNNYHYEGTCMYGIRCCFIH 248
>gi|332227305|ref|XP_003262835.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Nomascus
leucogenys]
Length = 500
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G CKYG C+F H + + + + L + +C + G C +GP
Sbjct: 159 CRPFEESGMCKYGEKCQFAHGFHEL--RSLTRLQNLTRHPKYKTELCRTFHTIGFCPYGP 216
Query: 217 TCRFDH 222
C F H
Sbjct: 217 RCHFIH 222
>gi|348508274|ref|XP_003441679.1| PREDICTED: hypothetical protein LOC100696516 [Oreochromis
niloticus]
Length = 393
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H E + L + +C + G C +G
Sbjct: 125 CRSFTENGLCKYGGKCQFAHGPEELRD--------LNRHPKYKTELCRTFHTIGFCPYGI 176
Query: 217 TCRFDH 222
C F H
Sbjct: 177 RCHFVH 182
>gi|170068665|ref|XP_001868953.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864657|gb|EDS28040.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 251
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + + L + +C + G C +GP
Sbjct: 12 CRPFEEAGECKYGDKCQFAHGMQELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 63
Query: 217 TCRFDH 222
C F H
Sbjct: 64 RCHFVH 69
>gi|395731886|ref|XP_003775975.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 36, C3H1
type-like 2-like [Pongo abelii]
Length = 489
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|395526914|ref|XP_003765599.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Sarcophilus harrisii]
Length = 470
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
+D+ +CP+Y++TGSC+FG C H P+S T L + + G
Sbjct: 167 KDQANCPFYIKTGSCRFGDRCSRKHNYPTSSQTLLIRSMFITFG 210
>gi|195398865|ref|XP_002058041.1| GJ15863 [Drosophila virilis]
gi|194150465|gb|EDW66149.1| GJ15863 [Drosophila virilis]
Length = 433
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y G CKYG C+F H + L + C + G C +GP
Sbjct: 125 CRPYEEAGECKYGEKCQFAH--------GYHELRNLQRHPKYKTEYCRTFHSVGFCPYGP 176
Query: 217 TCRFDH 222
C F H
Sbjct: 177 RCHFVH 182
>gi|149034888|gb|EDL89608.1| rCG42591, isoform CRA_c [Rattus norvegicus]
Length = 180
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 213
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 36 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 93
Query: 214 FGPTCRFDHPYAGYPI 229
GP+C+F HP P+
Sbjct: 94 EGPSCKFMHPRFELPM 109
>gi|380026391|ref|XP_003696935.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Apis florea]
Length = 416
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+ N G C+ G +C++ H + I PS +C + + GICKFG
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTQGIWNDGNNETIISSSAPSM--NTVCRFFKL-GICKFGN 66
Query: 217 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKIPNWVQ 272
C F H N + SI SS H + IS +I+ D +S WV+
Sbjct: 67 QCYFRHSTETVDNNL---VNANSIESSSPGQHTSNISTPTTIKNVKDNTSIAEEWVK 120
>gi|148706626|gb|EDL38573.1| mCG15594 [Mus musculus]
Length = 334
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 137 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 188
Query: 217 TCRFDH 222
C F H
Sbjct: 189 RCHFIH 194
>gi|351726504|ref|NP_001236361.1| uncharacterized protein LOC100527203 [Glycine max]
gi|255631776|gb|ACU16255.1| unknown [Glycine max]
Length = 127
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 142 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
S Q +P P++P C +++NTG C+YG CK+ HP
Sbjct: 41 SFKQQQIPPIPNRPLCFHFVNTGFCRYGDSCKYLHP 76
>gi|213409996|ref|XP_002175768.1| zinc finger protein [Schizosaccharomyces japonicus yFS275]
gi|212003815|gb|EEB09475.1| zinc finger protein [Schizosaccharomyces japonicus yFS275]
Length = 495
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 26/75 (34%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL---------PSRPGQAICSNYS 207
C+ +M G C+YG+ C+F H GP+ L SRP C +YS
Sbjct: 433 CKNWMAYGRCRYGSKCQFAH-------------GPMELKTPVRHPKYKSRP----CRSYS 475
Query: 208 MYGICKFGPTCRFDH 222
+G C +G C F H
Sbjct: 476 QFGYCPYGQRCCFLH 490
>gi|254573282|ref|XP_002493750.1| Member of the CCCH zinc finger family [Komagataella pastoris GS115]
gi|238033549|emb|CAY71571.1| Member of the CCCH zinc finger family [Komagataella pastoris GS115]
gi|328354427|emb|CCA40824.1| Zinc finger CCCH domain-containing protein 7 [Komagataella pastoris
CBS 7435]
Length = 244
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G C YG C+F H + + PS C+N++ +G C++G
Sbjct: 184 CDQFNQKGHCPYGTKCQFAH--------GTHELKSVKRPSNWKTKPCANWTKFGKCRYGK 235
Query: 217 TCRFDH 222
C F H
Sbjct: 236 RCCFKH 241
>gi|24641595|ref|NP_727633.1| Tis11 homolog, isoform B [Drosophila melanogaster]
gi|22832154|gb|AAN09314.1| Tis11 homolog, isoform B [Drosophila melanogaster]
Length = 408
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 168
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 69 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 124
Query: 169 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G C+F H + + C + G C +GP C F H
Sbjct: 125 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 170
>gi|195132534|ref|XP_002010698.1| GI21684 [Drosophila mojavensis]
gi|193907486|gb|EDW06353.1| GI21684 [Drosophila mojavensis]
Length = 411
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y G CKYG C+F H + L + C + G C +GP
Sbjct: 161 CRPYEEAGECKYGEKCQFAH--------GCHELRNLQRHPKYKTEYCRTFHSVGFCPYGP 212
Query: 217 TCRFDH 222
C F H
Sbjct: 213 RCHFVH 218
>gi|157127959|ref|XP_001661247.1| butyrate response factor 1 (TIS11B protein) [Aedes aegypti]
gi|108882307|gb|EAT46532.1| AAEL002308-PA [Aedes aegypti]
Length = 355
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + + L + +C + G C +GP
Sbjct: 91 CRPFEEAGECKYGDKCQFAHGMQELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 142
Query: 217 TCRFDH 222
C F H
Sbjct: 143 RCHFVH 148
>gi|334346699|ref|XP_001380936.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Monodelphis
domestica]
Length = 466
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
+D+ +CP+Y++TGSC+FG C H P+S T L + + G
Sbjct: 166 KDQANCPFYIKTGSCRFGDRCSRKHNYPTSSQTLLIRSMFITFG 209
>gi|116004517|ref|NP_001070621.1| zinc finger protein 36, C3H type-like 1a [Danio rerio]
gi|115313405|gb|AAI24506.1| Zinc finger protein 36, C3H type-like 2 [Danio rerio]
gi|182890842|gb|AAI65552.1| Zfp36l2 protein [Danio rerio]
Length = 374
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 150 CRPFEENGACKYGDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGP 201
Query: 217 TCRFDH 222
C F H
Sbjct: 202 RCHFIH 207
>gi|147901333|ref|NP_001081886.1| zinc finger protein 36, C3H1 type-like 2-B [Xenopus laevis]
gi|4580024|gb|AAD24209.1|AF061982_1 CCCH zinc finger protein C3H-3 [Xenopus laevis]
Length = 364
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 139 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 190
Query: 217 TCRFDH 222
C F H
Sbjct: 191 RCHFIH 196
>gi|113931266|ref|NP_001039082.1| zinc finger protein 36, C3H type-like 2, gene 2 [Xenopus (Silurana)
tropicalis]
gi|89267207|emb|CAJ81408.1| zinc finger protein 36 C3H type like 2 [Xenopus (Silurana)
tropicalis]
Length = 279
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGIC 212
CR + GTC YG C F H + + S P GLP+R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVSPDAP-GLPTRRYAGPYREQCRLWRSPGGC 147
Query: 213 KFGPTCRFDHP 223
+G C F HP
Sbjct: 148 PYGARCHFQHP 158
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 23/86 (26%)
Query: 141 LSASSQNLPER----PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 196
+S + LP R P + CR + + G C YGA C F HPK G
Sbjct: 118 VSPDAPGLPTRRYAGPYREQCRLWRSPGGCPYGARCHFQHPK--------------GF-- 161
Query: 197 RPGQAICSNYSMYGICKFGPTCRFDH 222
+ C +++ +G C +G C F H
Sbjct: 162 ---REACRHFAAHGDCPYGARCHFSH 184
>gi|82132888|sp|Q805B4.1|TISDB_XENLA RecName: Full=Zinc finger protein 36, C3H1 type-like 2-B; AltName:
Full=CCCH zinc finger protein 3-B; Short=XC3H-3b
gi|27544283|dbj|BAC54909.1| hypothetical protein [Xenopus laevis]
Length = 364
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 139 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 190
Query: 217 TCRFDH 222
C F H
Sbjct: 191 RCHFIH 196
>gi|354546718|emb|CCE43450.1| hypothetical protein CPAR2_210940 [Candida parapsilosis]
Length = 220
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 17/133 (12%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASNIGPLG----LPSRPGQAICSNYSM 208
P+C +Y G C G++C + H P+ +I + N G SR + Y M
Sbjct: 97 PECLFYSKNGYCTQGSECLYQHIDPQSKIPECMNYNAGFCAEGPNCKSRHVRRTICPYYM 156
Query: 209 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDA--SSK 266
G C GP C HP Y N L + P I +A A S E D S+
Sbjct: 157 AGFCPQGPECEHTHPKFDYH-NLYLRIKPDPI--------RATQAESSGEEEKDGVMVSQ 207
Query: 267 IPNWVQNSDAVSV 279
I S+A+SV
Sbjct: 208 IEGNASESNAISV 220
>gi|302830796|ref|XP_002946964.1| CCCH-type zinc finger protein [Volvox carteri f. nagariensis]
gi|300268008|gb|EFJ52190.1| CCCH-type zinc finger protein [Volvox carteri f. nagariensis]
Length = 118
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 157 CRYYMNTGTCKYGADCK--FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 214
CR + TG+C+YG+ C+ F H E + P+ + C ++ GIC++
Sbjct: 5 CRSWTETGSCRYGSKCQASFAHGPEELR--------PVVRHPKYKTEHCRTFAATGICQY 56
Query: 215 GPTCRFDHPYA 225
G CRF H A
Sbjct: 57 GNRCRFIHAAA 67
>gi|312383024|gb|EFR28263.1| hypothetical protein AND_04029 [Anopheles darlingi]
Length = 572
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y G CKYG C+F H + L + +C + G C +GP
Sbjct: 281 CRPYEEAGECKYGDKCQFAHGMHELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 332
Query: 217 TCRFDH 222
C F H
Sbjct: 333 RCHFVH 338
>gi|409051356|gb|EKM60832.1| hypothetical protein PHACADRAFT_247008 [Phanerochaete carnosa
HHB-10118-sp]
Length = 710
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKE--RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 214
CR + G+C+YGA C+F H +E R+ Q + IC + + G C +
Sbjct: 407 CRSWEEKGSCRYGAKCQFAHGEEELRLVQRHP----------KYKTEICRTFWVSGSCPY 456
Query: 215 GPTCRFDH 222
G C F H
Sbjct: 457 GKRCCFIH 464
>gi|54038658|gb|AAH84221.1| Unknown (protein for MGC:80832) [Xenopus laevis]
Length = 335
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 110 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 161
Query: 217 TCRFDH 222
C F H
Sbjct: 162 RCHFIH 167
>gi|50286627|ref|XP_445742.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525048|emb|CAG58661.1| unnamed protein product [Candida glabrata]
Length = 453
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G CKYG C+F H + + SN ++P C N+ G C +G
Sbjct: 345 CETFTTKGFCKYGNKCQFAHGLQELKLKKTSN----NFRTKP----CINWDKLGYCPYGK 396
Query: 217 TCRFDH 222
C F H
Sbjct: 397 RCCFKH 402
>gi|321466129|gb|EFX77126.1| hypothetical protein DAPPUDRAFT_9312 [Daphnia pulex]
Length = 70
Score = 41.2 bits (95), Expect = 0.60, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y GTCKYG C+F H + L + +C + G C +GP
Sbjct: 9 CRPYEENGTCKYGDKCQFAH--------GFHELRSLIRHPKYKTELCRTFHTIGFCPYGP 60
Query: 217 TCRFDH 222
C F H
Sbjct: 61 RCHFVH 66
>gi|392571357|gb|EIW64529.1| hypothetical protein TRAVEDRAFT_139454 [Trametes versicolor
FP-101664 SS1]
Length = 761
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+C+YGA C+F H ++ + + + + IC + + G C +G
Sbjct: 452 CRSWEEKGSCRYGAKCQFAHGEDELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 503
Query: 217 TCRFDH 222
C F H
Sbjct: 504 RCCFIH 509
>gi|356574074|ref|XP_003555177.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Glycine max]
Length = 160
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 124 YSSRNQGDLGAGAQMHIL-------------SASSQNLPERPDQPDCRYYMNTGTCKYGA 170
Y + D A + H+L S Q +P P++ C +++NTG C+YG
Sbjct: 7 YCEKQFQDTAADRKRHVLGIQQQQAKARWYDSFKQQQIPPVPNRSLCFHFVNTGFCRYGD 66
Query: 171 DCKFHHP 177
CK+ HP
Sbjct: 67 SCKYLHP 73
>gi|340505388|gb|EGR31720.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 241
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY------- 209
CR++ N G C+ G+ C F H +E + + +N P+ +P+ + +C+NY
Sbjct: 42 CRHFKN-GNCQLGSACHFAHGQEELRNT--NNPTPINVPTSQPKVLCNNYKTVKCQYFQR 98
Query: 210 GICKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
G CK C F P+ + G+S P S+
Sbjct: 99 GFCKNQQACSF--PHGDEEMMSGISSFPTSV 127
>gi|63054460|ref|NP_588409.2| zf-CCCH type zinc finger protein [Schizosaccharomyces pombe 972h-]
gi|48474269|sp|O74463.2|YQC1_SCHPO RecName: Full=Uncharacterized protein C1739.01
gi|157310530|emb|CAA20774.2| zf-CCCH type zinc finger protein [Schizosaccharomyces pombe]
Length = 547
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 20/70 (28%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+++ N GTC G +C F H E RP IC Y + G CKFGP
Sbjct: 47 CKFFRN-GTCTAGENCPFSHSLET---------------ERP---IC-KYFLKGNCKFGP 86
Query: 217 TCRFDHPYAG 226
C H G
Sbjct: 87 KCALSHALPG 96
>gi|154303548|ref|XP_001552181.1| hypothetical protein BC1G_09345 [Botryotinia fuckeliana B05.10]
Length = 1161
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 15/89 (16%)
Query: 147 NLPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 204
LP D P C Y+ + +C G DCK H +A N L + ++PG C
Sbjct: 483 RLPASVDGPQWVCYYWYHDNSCTKGVDCKMAH--------SADN--DLRVAAKPGSVTC- 531
Query: 205 NYSMYGICKFGPTCRFDH--PYAGYPINY 231
Y + G C+ G C F H P+ G I+Y
Sbjct: 532 RYWIQGHCRNGIDCFFAHESPHNGRSISY 560
>gi|325188682|emb|CCA23213.1| tRNAdihydrouridine synthase 3 putative [Albugo laibachii Nc14]
Length = 637
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 150 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 209
E P CR+ + C+YG CKF H + + +I P C + +
Sbjct: 58 EDPSDVLCRFLAVSKPCEYGERCKFSHEIKDFMKRKPKDIHPY----------CPIFESF 107
Query: 210 GICKFGPTCRF 220
G C++G CRF
Sbjct: 108 GECEYGLKCRF 118
>gi|395526014|ref|XP_003765170.1| PREDICTED: tristetraprolin [Sarcophilus harrisii]
Length = 291
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YG+ C+F H E + P + +C + + G C +G
Sbjct: 51 CRTFSESGKCRYGSKCQFTHGLE--------ELRPASRHPKYKTELCRKFLLLGACPYGT 102
Query: 217 TCRFDH-PY 224
C F H PY
Sbjct: 103 RCHFIHTPY 111
>gi|293352395|ref|XP_002727980.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Rattus norvegicus]
Length = 243
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL R + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRRTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|297298126|ref|XP_002808510.1| PREDICTED: LOW QUALITY PROTEIN: butyrate response factor 1-like
[Macaca mulatta]
Length = 332
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 114 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 165
Query: 217 TCRFDH 222
C F H
Sbjct: 166 RCHFIH 171
>gi|148356224|ref|NP_579824.2| tristetraprolin [Rattus norvegicus]
gi|149056466|gb|EDM07897.1| zinc finger protein 36 [Rattus norvegicus]
Length = 326
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 108 CRTYSESGRCRYGAKCQFAHGPGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 159
Query: 217 TCRFDH 222
C F H
Sbjct: 160 RCHFIH 165
>gi|402224498|gb|EJU04560.1| hypothetical protein DACRYDRAFT_62698, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 314
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQ--SAASNIGPLGLPSRPGQAI---CSNYSMY 209
P+C +Y G C G +C + HPKER A PLG A C NY +
Sbjct: 145 PECWWYAKYGYCSAGDECLYTHPKERKIDCPDYARGFCPLGPKCERKHARRVPCQNY-LS 203
Query: 210 GICKFGPTCRFDHPYAGYP 228
G C G C HP P
Sbjct: 204 GFCPLGKECALAHPKWELP 222
>gi|118779804|ref|XP_309752.3| AGAP010954-PA [Anopheles gambiae str. PEST]
gi|116131343|gb|EAA05601.3| AGAP010954-PA [Anopheles gambiae str. PEST]
Length = 226
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y G CKYG C+F H + + L + +C + G C +GP
Sbjct: 95 CRPYEEAGECKYGDKCQFAHGMQELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 146
Query: 217 TCRFDH 222
C F H
Sbjct: 147 RCHFVH 152
>gi|1717819|sp|P47973.1|TTP_RAT RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Protein
TIS11A; Short=TIS11; AltName: Full=Zinc finger protein
36; Short=Zfp-36
gi|57759|emb|CAA44970.1| Tis 11 protein [Rattus rattus]
gi|9971206|dbj|BAB12432.1| TIS11 [Rattus norvegicus]
gi|37805235|gb|AAH60308.1| Zinc finger protein 36 [Rattus norvegicus]
Length = 320
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 102 CRTYSESGRCRYGAKCQFAHGPGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 153
Query: 217 TCRFDH 222
C F H
Sbjct: 154 RCHFIH 159
>gi|392332511|ref|XP_003752602.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Rattus norvegicus]
Length = 247
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL R + IC NY
Sbjct: 98 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRRTRRVICVNY- 155
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 156 LVGFCPEGPSCKFMHPRFELPM 177
>gi|449502445|ref|XP_004174509.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 36, C3H1
type-like 2-like [Taeniopygia guttata]
Length = 384
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 167 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 218
Query: 217 TCRFDH 222
C F H
Sbjct: 219 RCHFIH 224
>gi|449016249|dbj|BAM79651.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 401
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 201
CRYY+ G CK+G C++ HP +++ +GP G+P+ GQA
Sbjct: 4 CRYYLQ-GNCKFGDRCRYEHPPGLGGRASRQQVGP-GMPAASGQA 46
>gi|409044771|gb|EKM54252.1| hypothetical protein PHACADRAFT_174761 [Phanerochaete carnosa
HHB-10118-sp]
Length = 2312
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 19/121 (15%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL---------GLPSRPGQAICSNYS 207
CR+++ G C+YG+ C F H + + + + P+ PG+ C+ Y
Sbjct: 6 CRFHLKPGGCRYGSSCTFAHIEGATSATGGNTTDAATPGSSSTFESSPAPPGK--CTFYW 63
Query: 208 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLS-----ILDSSLMNHQAISATHSIETSPD 262
G CK G CRF H P++ S P ++ + D+ L I + ET D
Sbjct: 64 KTGDCKRGFQCRFKH---DRPVDPSTSTPEVTTTRANVTDALLPFLTPIGISRLFETGSD 120
Query: 263 A 263
A
Sbjct: 121 A 121
>gi|24641593|ref|NP_511141.2| Tis11 homolog, isoform A [Drosophila melanogaster]
gi|442616128|ref|NP_001259490.1| Tis11 homolog, isoform C [Drosophila melanogaster]
gi|76803822|sp|P47980.2|TIS1_DROME RecName: Full=Protein TIS11; AltName: Full=dTIS11
gi|22832153|gb|AAF48194.2| Tis11 homolog, isoform A [Drosophila melanogaster]
gi|189182164|gb|ACD81858.1| LD36337p [Drosophila melanogaster]
gi|440216705|gb|AGB95332.1| Tis11 homolog, isoform C [Drosophila melanogaster]
Length = 436
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 168
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 97 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 152
Query: 169 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G C+F H + + C + G C +GP C F H
Sbjct: 153 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 198
>gi|6756059|ref|NP_035886.1| tristetraprolin [Mus musculus]
gi|135862|sp|P22893.1|TTP_MOUSE RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Growth
factor-inducible nuclear protein NUP475; AltName:
Full=Protein TIS11A; Short=TIS11; AltName:
Full=TPA-induced sequence 11; AltName: Full=Zinc finger
protein 36; Short=Zfp-36
gi|200100|gb|AAA39837.1| nuclear protein [Mus musculus]
gi|202169|gb|AAA72947.1| TIS11 primary response gene [Mus musculus]
gi|202206|gb|AAA40498.1| tristetraproline [Mus musculus]
gi|1020395|gb|AAC37676.1| tristetraprolin [Mus musculus]
gi|18204723|gb|AAH21391.1| Zinc finger protein 36 [Mus musculus]
gi|74191806|dbj|BAE32856.1| unnamed protein product [Mus musculus]
gi|148692194|gb|EDL24141.1| zinc finger protein 36 [Mus musculus]
Length = 319
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 101 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 152
Query: 217 TCRFDH 222
C F H
Sbjct: 153 RCHFIH 158
>gi|148235813|ref|NP_001081888.1| zinc finger protein 36, C3H type-like 2, gene 1 [Xenopus laevis]
gi|4580026|gb|AAD24210.1|AF061983_1 CCCH zinc finger protein C3H-4 [Xenopus laevis]
Length = 276
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 157 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGI 211
CR + GTC YG C F H P+ER + L LP R P + C +S G
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDN--LSLPPRRYGGPYRERCRLWSAPGG 146
Query: 212 CKFGPTCRFDHP 223
C +G C F HP
Sbjct: 147 CPYGARCHFQHP 158
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 19/71 (26%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
P + CR + G C YGA C F HPK + C +++ G
Sbjct: 133 PYRERCRLWSAPGGCPYGARCHFQHPKS-------------------ARETCRHFAALGD 173
Query: 212 CKFGPTCRFDH 222
C +G C F H
Sbjct: 174 CPYGACCHFSH 184
>gi|195447116|ref|XP_002071071.1| GK25600 [Drosophila willistoni]
gi|194167156|gb|EDW82057.1| GK25600 [Drosophila willistoni]
Length = 451
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y G CKYG C+F H + L + C + G C +GP
Sbjct: 157 CRPYEEAGECKYGEKCQFAHGYHELRN--------LQRHPKYKTEYCRTFHSVGFCPYGP 208
Query: 217 TCRFDH 222
C F H
Sbjct: 209 RCHFVH 214
>gi|170285014|gb|AAI61276.1| zinc finger protein 36, C3H type-like 2, gene 1 [Xenopus (Silurana)
tropicalis]
Length = 271
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 23/86 (26%)
Query: 141 LSASSQNLPER----PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 196
+S + LP R P + CR + + G C YGA C F HPK
Sbjct: 118 VSPDAPRLPTRKYAGPYRERCRLWRSPGGCPYGARCHFQHPKS----------------- 160
Query: 197 RPGQAICSNYSMYGICKFGPTCRFDH 222
+ +C +++ G C +G C F H
Sbjct: 161 --IREVCRHFAALGDCPYGARCHFSH 184
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGIC 212
CR + GTC YG C F H + +S S P LP+R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERRESPVSPDAP-RLPTRKYAGPYRERCRLWRSPGGC 147
Query: 213 KFGPTCRFDHP 223
+G C F HP
Sbjct: 148 PYGARCHFQHP 158
>gi|663198|emb|CAA57066.1| TIScc1 [Drosophila melanogaster]
gi|1093615|prf||2104281A cc1 gene
Length = 436
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 168
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 97 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 152
Query: 169 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G C+F H + + C + G C +GP C F H
Sbjct: 153 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 198
>gi|405118334|gb|AFR93108.1| no arches protein [Cryptococcus neoformans var. grubii H99]
Length = 332
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 209
P+C +++ G C+ G +C + HP++R + N G L P+ P + I C Y+
Sbjct: 125 PECIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAA- 183
Query: 210 GICKFGPTCRFDHP 223
G C G C+ HP
Sbjct: 184 GFCPDGKDCKLAHP 197
>gi|403269875|ref|XP_003926933.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2, partial
[Saimiri boliviensis boliviensis]
Length = 332
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 217 TCRFDH 222
C F H
Sbjct: 211 RCHFIH 216
>gi|194895813|ref|XP_001978349.1| GG17735 [Drosophila erecta]
gi|190649998|gb|EDV47276.1| GG17735 [Drosophila erecta]
Length = 457
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 21/112 (18%)
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGA 170
++L+ + N G++ +H +Q+ P P QP CR + G CKYG
Sbjct: 104 ASLVTITENLGNMN----LHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGE 159
Query: 171 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
C+F H + + + + C + G C +GP C F H
Sbjct: 160 KCQFAH--------GSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 203
>gi|169843403|ref|XP_001828431.1| hypothetical protein CC1G_04402 [Coprinopsis cinerea okayama7#130]
gi|116510528|gb|EAU93423.1| hypothetical protein CC1G_04402 [Coprinopsis cinerea okayama7#130]
Length = 738
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+C+YG+ C+F H +E + + + + IC + + G C +G
Sbjct: 411 CRSWEEKGSCRYGSKCQFAHGEEELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 462
Query: 217 TCRFDH 222
C F H
Sbjct: 463 RCCFIH 468
>gi|213623886|gb|AAI70356.1| C3H-4 protein [Xenopus laevis]
Length = 276
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 157 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGI 211
CR + GTC YG C F H P+ER + L LP R P + C +S G
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDN--LSLPPRRYGGPYRERCRLWSAPGG 146
Query: 212 CKFGPTCRFDHP 223
C +G C F HP
Sbjct: 147 CPYGARCHFQHP 158
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 19/71 (26%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
P + CR + G C YGA C F HPK + C +++ G
Sbjct: 133 PYRERCRLWSAPGGCPYGARCHFQHPKS-------------------ARETCRHFAALGD 173
Query: 212 CKFGPTCRFDH 222
C +G C F H
Sbjct: 174 CPYGACCHFSH 184
>gi|118382894|ref|XP_001024603.1| hypothetical protein TTHERM_00301750 [Tetrahymena thermophila]
gi|89306370|gb|EAS04358.1| hypothetical protein TTHERM_00301750 [Tetrahymena thermophila
SB210]
Length = 383
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
Query: 147 NLPERPDQPD--------CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
NL + P+Q + C+ +M G C YG C+F H K + + N +
Sbjct: 207 NLTQGPNQQETSKFKTEMCKNWMEFGKCNYGKKCQFAHGKNELVDKSTVN------KRQY 260
Query: 199 GQAICSNYSMYGICKFGPTCRFDHP 223
+C+++ C +G C F H
Sbjct: 261 KSKLCNSFHTQKFCPYGNRCMFIHE 285
>gi|170595935|ref|XP_001902576.1| C3H-1 protein [Brugia malayi]
gi|158589673|gb|EDP28575.1| C3H-1 protein, putative [Brugia malayi]
Length = 349
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + +TG C YG C+F H + + AA P + +C+ +++YG+C +G
Sbjct: 122 CNAFRDTGQCAYGFHCRFAHGIDEL--RAAPGPHP-----KYKTRLCNKFTLYGLCPYGS 174
Query: 217 TCRFDH 222
C+F H
Sbjct: 175 HCQFIH 180
>gi|229594940|ref|XP_001020846.3| hypothetical protein TTHERM_00411520 [Tetrahymena thermophila]
gi|225566487|gb|EAS00601.3| hypothetical protein TTHERM_00411520 [Tetrahymena thermophila
SB210]
Length = 272
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQ--------SAASNIGPLGLPSRPGQAICSNYSM 208
CR++ +G C+ GA C F H +E + + +N+ + + ++I Y+
Sbjct: 19 CRHWQTSGNCQIGAKCHFAHGQEELRNPNDPIKDATVIANVLSNPIQIQSYKSIRCKYND 78
Query: 209 YGICKFGPTCRFDH 222
G C++G C F H
Sbjct: 79 IGACRYGQACYFSH 92
>gi|354483439|ref|XP_003503900.1| PREDICTED: tristetraprolin-like [Cricetulus griseus]
Length = 374
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 157 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 208
Query: 217 TCRFDH 222
C F H
Sbjct: 209 RCHFIH 214
>gi|213511967|ref|NP_001133923.1| Butyrate response factor 1 [Salmo salar]
gi|209155826|gb|ACI34145.1| Butyrate response factor 1 [Salmo salar]
Length = 364
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+CKYG+ C+F H + + G P +A C + +G C +G
Sbjct: 126 CRSFQENGSCKYGSKCQFAHGEPELR-------GLYRHPKYKTEA-CRTFYNFGYCPYGA 177
Query: 217 TCRFDHPYAGYPI 229
C F H P+
Sbjct: 178 RCHFIHEEKLTPL 190
>gi|347659013|ref|NP_001231630.1| zinc finger protein 36, C3H1 type-like 1 isoform 2 [Homo sapiens]
Length = 407
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 189 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 240
Query: 217 TCRFDH 222
C F H
Sbjct: 241 RCHFIH 246
>gi|336365876|gb|EGN94225.1| hypothetical protein SERLA73DRAFT_78143 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378558|gb|EGO19716.1| hypothetical protein SERLADRAFT_453661 [Serpula lacrymans var.
lacrymans S7.9]
Length = 304
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 210
P+C ++ G C G +C + HPKER + G L P + + + + G
Sbjct: 121 PECWWFAKYGYCSAGDECLYAHPKERRVECPDYKRGFCKLGPTCPRKHVRRVACQLYLTG 180
Query: 211 ICKFGPTCRFDHPYAGYP 228
IC GP C HP P
Sbjct: 181 ICPLGPDCPRGHPKPDLP 198
>gi|321252264|ref|XP_003192345.1| essential RNA-binding component of cleavage and polyadenylation
factor; Yth1p [Cryptococcus gattii WM276]
gi|317458813|gb|ADV20558.1| Essential RNA-binding component of cleavage and polyadenylation
factor, putative; Yth1p [Cryptococcus gattii WM276]
Length = 332
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 209
P+C +++ G C+ G +C + HP++R + N G L P+ P + I C Y+
Sbjct: 125 PECIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRMCEAYAA- 183
Query: 210 GICKFGPTCRFDHP 223
G C G C+ HP
Sbjct: 184 GFCPDGRDCKLAHP 197
>gi|308496473|ref|XP_003110424.1| CRE-POS-1 protein [Caenorhabditis remanei]
gi|308243765|gb|EFO87717.1| CRE-POS-1 protein [Caenorhabditis remanei]
Length = 261
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 19/74 (25%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 208
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGDQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 209 YGICKFGPTCRFDH 222
G CK+G C+F H
Sbjct: 155 TGNCKYGTRCQFIH 168
>gi|45201139|ref|NP_986709.1| AGR044Cp [Ashbya gossypii ATCC 10895]
gi|44985922|gb|AAS54533.1| AGR044Cp [Ashbya gossypii ATCC 10895]
gi|374109960|gb|AEY98865.1| FAGR044Cp [Ashbya gossypii FDAG1]
Length = 300
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + TG CKY C+F H + S+ ++P C N+S G C++G
Sbjct: 191 CESFATTGACKYDNKCQFAHGLHELKFKERSD----KFRTKP----CINWSKTGYCRYGK 242
Query: 217 TCRFDH 222
C F H
Sbjct: 243 RCCFKH 248
>gi|281349381|gb|EFB24965.1| hypothetical protein PANDA_005238 [Ailuropoda melanoleuca]
Length = 320
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 102 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 153
Query: 217 TCRFDH 222
C F H
Sbjct: 154 RCHFIH 159
>gi|388505774|gb|AFK40953.1| unknown [Medicago truncatula]
Length = 37
Score = 40.8 bits (94), Expect = 0.80, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 161 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
M G CK+G C++HHP++++A A I P GLP RP
Sbjct: 1 MRNGDCKFGLACRYHHPRDQVA--ARPLISPFGLPLRP 36
>gi|213623884|gb|AAI70354.1| C3H-4 protein [Xenopus laevis]
Length = 276
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 157 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGI 211
CR + GTC YG C F H P+ER + L LP R P + C +S G
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDN--LSLPPRRYGGPYRERCRLWSAPGG 146
Query: 212 CKFGPTCRFDHP 223
C +G C F HP
Sbjct: 147 CPYGARCHFQHP 158
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 19/71 (26%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
P + CR + G C YGA C F HPK + C +++ G
Sbjct: 133 PYRERCRLWSAPGGCPYGARCHFQHPKSV-------------------RETCRHFAALGD 173
Query: 212 CKFGPTCRFDH 222
C +G C F H
Sbjct: 174 CPYGACCHFSH 184
>gi|397507282|ref|XP_003824130.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1 [Pan
paniscus]
Length = 407
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 189 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 240
Query: 217 TCRFDH 222
C F H
Sbjct: 241 RCHFIH 246
>gi|320592591|gb|EFX05021.1| hypothetical protein CMQ_5283 [Grosmannia clavigera kw1407]
Length = 740
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 13/80 (16%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
Q++ P +P C YY N G C G C+F H P LP+ Q C +
Sbjct: 49 QHIRPTPVRPQCTYY-NRGNCLRGMTCRFSHEG-----------TPQQLPAIRAQNPC-H 95
Query: 206 YSMYGICKFGPTCRFDHPYA 225
+ G C+ G TCRF H A
Sbjct: 96 FFARGRCRNGATCRFSHNQA 115
>gi|156379395|ref|XP_001631443.1| predicted protein [Nematostella vectensis]
gi|156218483|gb|EDO39380.1| predicted protein [Nematostella vectensis]
Length = 357
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
QD +C +Y++TGSC+FG C HP+P S T L
Sbjct: 193 QDTVNCAFYLKTGSCRFGERCSRQHPRPPSSVTLL 227
>gi|344236941|gb|EGV93044.1| Tristetraproline [Cricetulus griseus]
Length = 315
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 98 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 149
Query: 217 TCRFDH 222
C F H
Sbjct: 150 RCHFIH 155
>gi|301116960|ref|XP_002906208.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107557|gb|EEY65609.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 250
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+++ G+C+YG+ C+F H +E + G L P + C + G C +G
Sbjct: 48 CKHFTENGSCRYGSKCQFAHGEEELR-------GVLRHP-KYKTTRCKAFLSTGKCMYGS 99
Query: 217 TCRFDH 222
CRF H
Sbjct: 100 RCRFIH 105
>gi|426201842|gb|EKV51765.1| hypothetical protein AGABI2DRAFT_62064 [Agaricus bisporus var.
bisporus H97]
Length = 738
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTC+Y A C+F H ++ + + + + IC + + G C +G
Sbjct: 437 CRSWEEKGTCRYAAKCQFAHGEDELRK--------VSRHPKYKTEICRTFWVSGSCPYGK 488
Query: 217 TCRFDH 222
C F H
Sbjct: 489 RCCFIH 494
>gi|341904659|gb|EGT60492.1| hypothetical protein CAEBREN_18470 [Caenorhabditis brenneri]
Length = 265
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 19/74 (25%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 208
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 209 YGICKFGPTCRFDH 222
G CK+G C+F H
Sbjct: 155 TGNCKYGTRCQFIH 168
>gi|12836625|dbj|BAB23739.1| unnamed protein product [Mus musculus]
Length = 307
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 89 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 140
Query: 217 TCRFDH 222
C F H
Sbjct: 141 RCHFIH 146
>gi|449270924|gb|EMC81567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Columba livia]
Length = 453
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
+D +CP+Y++TGSC+FG C H P+S T L
Sbjct: 154 KDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLL 188
>gi|402584002|gb|EJW77944.1| hypothetical protein WUBG_11146, partial [Wuchereria bancrofti]
Length = 184
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 37/122 (30%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY++N C+ GA C F H + S+P + Y + G C FG
Sbjct: 11 CRYFVN-NICREGASCPFSHDRN----------------SKPDRTC--RYYLIGKCAFGT 51
Query: 217 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA 276
+CR+DH PPL + +A+ + +P+A+ + N +S+
Sbjct: 52 SCRYDHKR-----------PPLDGV-------KAVKSVSRTTGTPNATKVVENGCSSSEV 93
Query: 277 VS 278
V+
Sbjct: 94 VT 95
>gi|73963334|ref|XP_853070.1| PREDICTED: zinc finger protein 36, C3H type-like 1 isoform 3 [Canis
lupus familiaris]
Length = 338
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|389751127|gb|EIM92200.1| hypothetical protein STEHIDRAFT_47086 [Stereum hirsutum FP-91666
SS1]
Length = 296
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 210
P+C +Y G C G +C + HPKER + G L P + + + + G
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERKVECPDYKRGFCKLGPKCPRKHIRRVACQLYLTG 180
Query: 211 ICKFGPTCRFDHPYAGYP 228
C GP C HP P
Sbjct: 181 FCPLGPDCPRGHPKPNIP 198
>gi|301763295|ref|XP_002917068.1| PREDICTED: butyrate response factor 1-like [Ailuropoda melanoleuca]
Length = 338
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|332024832|gb|EGI65020.1| Putative E3 ubiquitin-protein ligase makorin-1 [Acromyrmex
echinatior]
Length = 417
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+ N GTC+ G +C++ H + ++I + + G+CKFG
Sbjct: 11 CRYFKN-GTCREGNNCRYRHVQ---GNRNDASINEATSTHSSAYIVTCRFFKQGMCKFGS 66
Query: 217 TCRFDH 222
CRF H
Sbjct: 67 QCRFRH 72
>gi|195352688|ref|XP_002042843.1| GM11580 [Drosophila sechellia]
gi|194126890|gb|EDW48933.1| GM11580 [Drosophila sechellia]
Length = 431
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 118 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 168
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 98 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 153
Query: 169 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G C+F H + + C + G C +GP C F H
Sbjct: 154 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 199
>gi|409083106|gb|EKM83463.1| hypothetical protein AGABI1DRAFT_33015 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 748
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTC+Y A C+F H ++ + + + + IC + + G C +G
Sbjct: 447 CRSWEEKGTCRYAAKCQFAHGEDELRK--------VSRHPKYKTEICRTFWVSGSCPYGK 498
Query: 217 TCRFDH 222
C F H
Sbjct: 499 RCCFIH 504
>gi|351714712|gb|EHB17631.1| Butyrate response factor 1 [Heterocephalus glaber]
Length = 338
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|340501726|gb|EGR28473.1| hypothetical protein IMG5_174580 [Ichthyophthirius multifiliis]
Length = 222
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 13/78 (16%)
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI-----------CS 204
+CR + G CKYG +CK+ H K R + G + I C
Sbjct: 83 ECRAFQ-RGECKYGENCKYSHEKRRTCNDFQNGNCKYGENCKYSHEIQQKRTTQQTKPCR 141
Query: 205 NYSMYGICKFGPTCRFDH 222
++ + G CK+G CRF H
Sbjct: 142 DF-LNGECKYGENCRFSH 158
>gi|155372187|ref|NP_001094704.1| zinc finger protein 36, C3H1 type-like 1 [Bos taurus]
gi|154425731|gb|AAI51441.1| ZFP36L1 protein [Bos taurus]
gi|296482999|tpg|DAA25114.1| TPA: butyrate response factor 1 [Bos taurus]
gi|440897352|gb|ELR49063.1| Zinc finger protein 36, C3H1 type-like 1 [Bos grunniens mutus]
Length = 338
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|417399200|gb|JAA46628.1| Putative ccch-type zn-finger protein [Desmodus rotundus]
Length = 338
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|395504153|ref|XP_003756421.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Sarcophilus
harrisii]
Length = 338
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 217 TCRFDH 222
C F H
Sbjct: 173 RCHFIH 178
>gi|326913598|ref|XP_003203123.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Meleagris gallopavo]
Length = 473
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
+D +CP+Y++TGSC+FG C H P+S T L
Sbjct: 168 KDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLL 202
>gi|253743945|gb|EET00219.1| Zinc finger domain-containing protein [Giardia intestinalis ATCC
50581]
Length = 192
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G C YG C+F H E SN+ + L C+++ G C +G
Sbjct: 36 CNCFAEFGRCDYGDRCQFAHSMEEFQHRRRSNVKDMKL--------CTDFITQGYCPYGR 87
Query: 217 TCRFDH 222
C F H
Sbjct: 88 RCNFLH 93
>gi|410048467|ref|XP_003314464.2| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Pan
troglodytes]
Length = 391
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 173 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 224
Query: 217 TCRFDH 222
C F H
Sbjct: 225 RCHFIH 230
>gi|348573284|ref|XP_003472421.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Cavia
porcellus]
Length = 338
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|291406477|ref|XP_002719590.1| PREDICTED: butyrate response factor 1 [Oryctolagus cuniculus]
Length = 338
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|145346967|ref|XP_001417952.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578180|gb|ABO96245.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 465
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 153 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL--PSRPGQAICSNYSMYG 210
++ D + + G+C ADC+F H E AA + G+ P R +C +++ G
Sbjct: 38 ERSDACFDWSRGSCAR-ADCRFSHEGEAGGNPAAGGVMGRGVGSPHRAAAGVCFDHAK-G 95
Query: 211 ICKFGPTCRFDH 222
CK G CRF H
Sbjct: 96 TCKRGDQCRFSH 107
>gi|54695804|gb|AAV38274.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|61366592|gb|AAX42880.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
Length = 339
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|410962515|ref|XP_003987814.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Felis catus]
gi|410962517|ref|XP_003987815.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2
[Felis catus]
Length = 338
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|354472162|ref|XP_003498309.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Cricetulus
griseus]
gi|344235754|gb|EGV91857.1| Butyrate response factor 1 [Cricetulus griseus]
Length = 338
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|335292719|ref|XP_003356787.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Sus scrofa]
Length = 338
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|149737318|ref|XP_001500199.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Equus
caballus]
Length = 338
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|431904505|gb|ELK09888.1| Butyrate response factor 1 [Pteropus alecto]
Length = 338
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|6680808|ref|NP_031590.1| zinc finger protein 36, C3H1 type-like 1 [Mus musculus]
gi|135863|sp|P23950.1|TISB_MOUSE RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName: Full=Protein
TIS11B
gi|202065|gb|AAA72948.1| TIS11 primary response gene [Mus musculus]
gi|26331836|dbj|BAC29648.1| unnamed protein product [Mus musculus]
gi|26341688|dbj|BAC34506.1| unnamed protein product [Mus musculus]
gi|148670707|gb|EDL02654.1| zinc finger protein 36, C3H type-like 1 [Mus musculus]
Length = 338
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|388580037|gb|EIM20355.1| hypothetical protein WALSEDRAFT_33405 [Wallemia sebi CBS 633.66]
Length = 292
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 20/121 (16%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 214
CR + GTC+YG C+F H ++ + +P P +C+ Y G C +
Sbjct: 101 CRSWEEKGTCRYGCKCQFAHGQDELRD----------VPRHPKFKTQLCATYWHSGSCPY 150
Query: 215 GPTCRFDHPYAGYPINYGLSLPPLSILDS----SLMNHQAISAT---HSIETSPDASSKI 267
G C F H + N PPL + + ++ Q+ + T HS+ +P+ S+
Sbjct: 151 GKRCCFIHSTFPHGANAN-GAPPLPLSEEEPTMTVSPRQSFTQTPTMHSLSLTPNTSTDS 209
Query: 268 P 268
P
Sbjct: 210 P 210
>gi|296215346|ref|XP_002754086.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Callithrix
jacchus]
Length = 338
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|363728701|ref|XP_425572.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Gallus gallus]
Length = 473
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
+D +CP+Y++TGSC+FG C H P+S T L
Sbjct: 168 KDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLL 202
>gi|402876515|ref|XP_003902009.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Papio anubis]
gi|403264495|ref|XP_003924515.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Saimiri
boliviensis boliviensis]
gi|355693383|gb|EHH27986.1| hypothetical protein EGK_18316 [Macaca mulatta]
gi|380815918|gb|AFE79833.1| zinc finger protein 36, C3H1 type-like 1 [Macaca mulatta]
Length = 338
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|344273937|ref|XP_003408775.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Loxodonta
africana]
Length = 338
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|90075092|dbj|BAE87226.1| unnamed protein product [Macaca fascicularis]
Length = 338
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|8392999|ref|NP_058868.1| zinc finger protein 36, C3H1 type-like 1 [Rattus norvegicus]
gi|135864|sp|P17431.1|TISB_RAT RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName:
Full=EGF-inducible protein CMG1; AltName: Full=Protein
TIS11B
gi|55961|emb|CAA36826.1| unnamed protein product [Rattus norvegicus]
Length = 338
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|395849618|ref|XP_003797418.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Otolemur garnettii]
gi|395849620|ref|XP_003797419.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2
[Otolemur garnettii]
gi|395849622|ref|XP_003797420.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 3
[Otolemur garnettii]
Length = 338
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|351696721|gb|EHA99639.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Heterocephalus glaber]
Length = 511
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 185 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSSTLLIRSMFTTFG 230
>gi|532796|gb|AAA62666.1| DTIS11 protein [Drosophila melanogaster]
Length = 437
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 21/112 (18%)
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGA 170
++L+ + N G++ +H +Q+ P P QP CR + G CKYG
Sbjct: 100 ASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGE 155
Query: 171 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
C+F H + + C + G C +GP C F H
Sbjct: 156 KCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 199
>gi|207080074|ref|NP_001128956.1| DKFZP469G0620 protein [Pongo abelii]
gi|55732554|emb|CAH92977.1| hypothetical protein [Pongo abelii]
Length = 338
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|194377356|dbj|BAG57626.1| unnamed protein product [Homo sapiens]
Length = 316
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|449483114|ref|XP_002194245.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Taeniopygia guttata]
Length = 644
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
+D +CP+Y++TGSC+FG C H P+S T L
Sbjct: 339 KDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLL 373
>gi|15812180|ref|NP_004917.2| zinc finger protein 36, C3H1 type-like 1 isoform 1 [Homo sapiens]
gi|347659004|ref|NP_001231627.1| zinc finger protein 36, C3H1 type-like 1 isoform 1 [Homo sapiens]
gi|1351254|sp|Q07352.1|TISB_HUMAN RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName:
Full=EGF-response factor 1; Short=ERF-1; AltName:
Full=Protein TIS11B
gi|825653|emb|CAA55670.1| ERF-1 [Homo sapiens]
gi|17390794|gb|AAH18340.1| Zinc finger protein 36, C3H type-like 1 [Homo sapiens]
gi|54695806|gb|AAV38275.1| zinc finger protein 36, C3H type-like 1 [Homo sapiens]
gi|61356812|gb|AAX41289.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
gi|61360527|gb|AAX41874.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
gi|119601373|gb|EAW80967.1| zinc finger protein 36, C3H type-like 1, isoform CRA_a [Homo
sapiens]
gi|119601374|gb|EAW80968.1| zinc finger protein 36, C3H type-like 1, isoform CRA_a [Homo
sapiens]
gi|123980892|gb|ABM82275.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|123995707|gb|ABM85455.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|168277788|dbj|BAG10872.1| butyrate response factor 1 [synthetic construct]
Length = 338
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|61370292|gb|AAX43470.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
Length = 339
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|366990107|ref|XP_003674821.1| hypothetical protein NCAS_0B03640 [Naumovozyma castellii CBS 4309]
gi|342300685|emb|CCC68448.1| hypothetical protein NCAS_0B03640 [Naumovozyma castellii CBS 4309]
Length = 376
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G CKYG C+F H + SN ++P C N++ G C +G
Sbjct: 275 CESFTTKGHCKYGNKCQFAHGLHELKIKQRSN----NFRTKP----CVNWTKLGYCPYGK 326
Query: 217 TCRFDH 222
C F H
Sbjct: 327 RCCFKH 332
>gi|332228957|ref|XP_003263654.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Nomascus leucogenys]
gi|441595135|ref|XP_004087218.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Nomascus
leucogenys]
Length = 338
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|256088194|ref|XP_002580237.1| hypothetical protein [Schistosoma mansoni]
gi|353228956|emb|CCD75127.1| hypothetical protein Smp_172780 [Schistosoma mansoni]
Length = 872
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 60/160 (37%), Gaps = 18/160 (11%)
Query: 145 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-------PSR 197
SQ P+ P P C YY G C+ G +C F HPK R A+ P G PS
Sbjct: 18 SQTDPQMPFPPVC-YYYQAGCCRNGNECTFTHPKVRCRTFASDGWCPYGYNCHFWHDPSV 76
Query: 198 PGQAI------CSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAI 251
+ C Y+ CK+G C F H N G++L H I
Sbjct: 77 KPNVVNLIKKPCLFYA-NNQCKYGDKCSFSHD-IDVQNNSGITLKEYRATKKVTGVHINI 134
Query: 252 SATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTT 291
A S T+ + S N + + SV N + S+T
Sbjct: 135 EALES--TTNEISHGKENGISEASLTSVMKSNLNKTLSST 172
>gi|50755569|ref|XP_414800.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Gallus gallus]
Length = 243
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GPTC+F HP P+
Sbjct: 152 LVGFCPEGPTCKFMHPRFELPM 173
>gi|393222216|gb|EJD07700.1| hypothetical protein FOMMEDRAFT_150244 [Fomitiporia mediterranea
MF3/22]
Length = 396
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 19/75 (25%)
Query: 148 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 207
+PER P C ++ N G CK GADC F H + +GP +C +++
Sbjct: 218 IPER--TPLCVHFANNGRCKNGADCLFPHVR----------VGPRS-------GVCRDFA 258
Query: 208 MYGICKFGPTCRFDH 222
+ G C G C H
Sbjct: 259 VLGYCDKGIDCEHQH 273
>gi|366997863|ref|XP_003683668.1| hypothetical protein TPHA_0A01510 [Tetrapisispora phaffii CBS 4417]
gi|357521963|emb|CCE61234.1| hypothetical protein TPHA_0A01510 [Tetrapisispora phaffii CBS 4417]
Length = 294
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 107 GNIGPLSPTSIAGSNLIYSSRN--QGDLGAGAQMHILSASSQNLPERPDQPD-CRYYMNT 163
N+ LS T++ ++ S + + + A ++ + S N+ ++ + + C +
Sbjct: 130 ANLQKLSSTNVTKNDENISHKKPIKIVITTAASVNAIDYSGTNINKQLFKTELCETFTTK 189
Query: 164 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G CKYG C+F H + +N ++P C N++ G C +G C F H
Sbjct: 190 GFCKYGNKCQFAHGLNELKLKQKTN----NFRTKP----CINWAKLGYCPYGKRCCFKH 240
>gi|397507284|ref|XP_003824131.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2 [Pan
paniscus]
Length = 338
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|193785835|dbj|BAG51270.1| unnamed protein product [Homo sapiens]
Length = 338
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|432107119|gb|ELK32542.1| Zinc finger protein 36, C3H1 type-like 1 [Myotis davidii]
Length = 319
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 101 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 152
Query: 217 TCRFDH 222
C F H
Sbjct: 153 RCHFIH 158
>gi|410076854|ref|XP_003956009.1| hypothetical protein KAFR_0B05780 [Kazachstania africana CBS 2517]
gi|372462592|emb|CCF56874.1| hypothetical protein KAFR_0B05780 [Kazachstania africana CBS 2517]
Length = 298
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G CKYG C+F H + SN +RP C N+ G C +G
Sbjct: 198 CESFTTKGFCKYGNKCQFAHGLTELKFKQRSN----NFRTRP----CINWQKLGYCPYGK 249
Query: 217 TCRFDH 222
C F H
Sbjct: 250 RCCFKH 255
>gi|1480243|emb|CAA67781.1| Berg36 [Homo sapiens]
Length = 338
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|197097548|ref|NP_001124577.1| zinc finger protein 36, C3H1 type-like 1 [Pongo abelii]
gi|55725015|emb|CAH89375.1| hypothetical protein [Pongo abelii]
Length = 316
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 98 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 149
Query: 217 TCRFDH 222
C F H
Sbjct: 150 RCHFIH 155
>gi|198470731|ref|XP_001355382.2| GA17935 [Drosophila pseudoobscura pseudoobscura]
gi|198145593|gb|EAL32440.2| GA17935 [Drosophila pseudoobscura pseudoobscura]
Length = 456
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 16/109 (14%)
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERP------DQPDCRYYMNTGTCKYGADCK 173
++L+ N G++ ++ S+ LP++P CR + G CKYG C+
Sbjct: 107 ASLVTIIENLGNMNLHRKLE--RTQSEPLPQQPMNISRYKTELCRPFEEAGECKYGEKCQ 164
Query: 174 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
F H + L + C + G C +GP C F H
Sbjct: 165 FAH--------GFHELRNLQRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 205
>gi|195059763|ref|XP_001995696.1| GH17894 [Drosophila grimshawi]
gi|193896482|gb|EDV95348.1| GH17894 [Drosophila grimshawi]
Length = 425
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y G CKYG C+F H + L + C + G C +GP
Sbjct: 115 CRPYEEAGECKYGEKCQFAHGYHELRN--------LQRHPKYKTEYCRTFHSAGFCPYGP 166
Query: 217 TCRFDH 222
C F H
Sbjct: 167 RCHFVH 172
>gi|327278691|ref|XP_003224094.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Anolis
carolinensis]
Length = 480
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G CKYG C+F H + L + +C + G C +GP
Sbjct: 176 CRPFEESGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 227
Query: 217 TCRFDH 222
C F H
Sbjct: 228 RCHFIH 233
>gi|156837017|ref|XP_001642545.1| hypothetical protein Kpol_344p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156113087|gb|EDO14687.1| hypothetical protein Kpol_344p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 304
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ + G CKYG C+F H + + SN ++P C N++ G C +G
Sbjct: 184 CKTFTTKGYCKYGNKCQFAHGLHEVKFKSRSN----NYRTKP----CINWTKLGYCPYGV 235
Query: 217 TCRFDH 222
C F H
Sbjct: 236 RCCFKH 241
>gi|339247875|ref|XP_003375571.1| conserved hypothetical protein [Trichinella spiralis]
gi|316971046|gb|EFV54885.1| conserved hypothetical protein [Trichinella spiralis]
Length = 198
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY++N C++G+ C F H + S N P C N +G CK+GP
Sbjct: 35 CRYFVNGPGCRFGSSCFFAHNLVELRPSMYRNFLYKTEP-------CRNLRTWGHCKYGP 87
Query: 217 TCRFDH 222
C + H
Sbjct: 88 RCLYLH 93
>gi|303277795|ref|XP_003058191.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460848|gb|EEH58142.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 216
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 147 NLPERPDQPDCRYYMNTGTCKYGADCKFHHP 177
+LP+RP+ C + TG C YG +C +HHP
Sbjct: 182 DLPQRPNAAHCIEFQKTGGCSYGKECPYHHP 212
>gi|195174909|ref|XP_002028208.1| GL13141 [Drosophila persimilis]
gi|194116707|gb|EDW38750.1| GL13141 [Drosophila persimilis]
Length = 446
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 16/109 (14%)
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERP------DQPDCRYYMNTGTCKYGADCK 173
++L+ N G++ ++ S+ LP++P CR + G CKYG C+
Sbjct: 94 ASLVTIIENLGNMNLHRKLE--RTQSEPLPQQPMNISRYKTELCRPFEEAGECKYGEKCQ 151
Query: 174 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
F H + L + C + G C +GP C F H
Sbjct: 152 FAH--------GFHELRNLQRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 192
>gi|156344584|ref|XP_001621239.1| hypothetical protein NEMVEDRAFT_v1g222211 [Nematostella vectensis]
gi|156206977|gb|EDO29139.1| predicted protein [Nematostella vectensis]
Length = 220
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 7 SCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
+C +Y++TGSC+FG C HP+P S T L
Sbjct: 165 NCAFYLKTGSCRFGERCSRQHPRPPSSVTLL 195
>gi|392597123|gb|EIW86445.1| hypothetical protein CONPUDRAFT_78791 [Coniophora puteana
RWD-64-598 SS2]
Length = 654
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTC+YG C+F H + + A + IC + + G C +G
Sbjct: 360 CRSWEEKGTCRYGTKCQFAHGEGELRSVARH--------PKYKTEICRTFWVSGACPYGK 411
Query: 217 TCRFDH---PYAGYPINYGLSLPPLSILDS 243
C F H P G + PP + +DS
Sbjct: 412 RCCFIHTELPANGAAPGAEGAPPPSATIDS 441
>gi|270289752|ref|NP_001161891.1| tristetraprolin [Sus scrofa]
gi|335289681|ref|XP_003355955.1| PREDICTED: tristetraprolin-like [Sus scrofa]
gi|262069462|gb|ACY08229.1| tristetraprolin [Sus scrofa]
gi|299832919|gb|ADJ56410.1| tristetraprolin [Sus scrofa]
gi|304422959|gb|ADM32892.1| tristetraprolin [Sus scrofa]
Length = 326
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 108 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 159
Query: 217 TCRFDH 222
C F H
Sbjct: 160 RCHFIH 165
>gi|431920161|gb|ELK18200.1| Tristetraproline [Pteropus alecto]
Length = 326
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 108 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 159
Query: 217 TCRFDH 222
C F H
Sbjct: 160 RCHFIH 165
>gi|357144913|ref|XP_003573458.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Brachypodium distachyon]
Length = 362
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 23/135 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQ-------------------SAASNIGPLGLPSR 197
C+ + C YG C F H ++ A+ +AA+N + PS
Sbjct: 181 CKKFYTEEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGSYNSPTAAANGPTILKPSN 240
Query: 198 PGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS---ILDSSLMNHQAISAT 254
IC+ + M G C FG C F H A YG L + I + A+SA
Sbjct: 241 WKTRICNKWEMTGYCPFGSKCHFAHGAAEL-HKYGGGLVDVEGRDIASTPDSKQAALSAK 299
Query: 255 HSIETSPDASSKIPN 269
ET+P +++ P+
Sbjct: 300 APAETTPASTAAPPH 314
>gi|145505017|ref|XP_001438475.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405647|emb|CAK71078.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ + TG+CK+G++C + H + + A + ++P C N+ YG C +G
Sbjct: 65 CKNFTLTGSCKFGSNCSYAHGQSELLPKAHLH---QNYKTKP----CKNFLNYGWCNYGS 117
Query: 217 TCRFDHP 223
C++ HP
Sbjct: 118 RCQYIHP 124
>gi|406607221|emb|CCH41482.1| Chromodomain-helicase-DNA-binding protein [Wickerhamomyces
ciferrii]
Length = 503
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + TG+C YG C+F H + N G S+P C+N+S G C++G
Sbjct: 444 CSTFNKTGSCPYGNKCQFAHGGNEL---KVVNRGS-KYRSKP----CANWSKTGSCRYGN 495
Query: 217 TCRFDH 222
C F H
Sbjct: 496 RCCFKH 501
>gi|353239624|emb|CCA71528.1| hypothetical protein PIIN_05464 [Piriformospora indica DSM 11827]
Length = 613
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+C+YG C+F H +E + + + + IC + + G C +G
Sbjct: 344 CRSWEEKGSCRYGPKCQFAHGEEELKK--------VQRHPKYKTEICRTFWLSGSCPYGK 395
Query: 217 TCRFDH 222
C F H
Sbjct: 396 RCCFIH 401
>gi|146094028|ref|XP_001467125.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
gi|134071489|emb|CAM70178.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
Length = 338
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 195
C+ ++ TG C +GA C +HHP A AS++ P LP
Sbjct: 300 CKQFVQTGRCTFGARCLYHHPTAVAAAPNASHVVPQRLP 338
>gi|417398920|gb|JAA46493.1| Putative ccch-type zn-finger protein [Desmodus rotundus]
Length = 322
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 104 CRTFSESGRCRYGAKCQFAHGPGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 155
Query: 217 TCRFDH 222
C F H
Sbjct: 156 RCHFIH 161
>gi|320582100|gb|EFW96318.1| mRNA 3'-end-processing protein, putative [Ogataea parapolymorpha
DL-1]
Length = 219
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 17/73 (23%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
PD+P C +++ +G C G DC+ HP + I Y + G+
Sbjct: 38 PDRPICEFWLQSGKCPNGNDCENKHPSKIF-----------------NNKIVCKYWLRGL 80
Query: 212 CKFGPTCRFDHPY 224
CK G C F H Y
Sbjct: 81 CKMGDDCDFLHEY 93
>gi|17544440|ref|NP_503020.1| Protein Y116A8C.20 [Caenorhabditis elegans]
gi|5832788|emb|CAB55126.1| Protein Y116A8C.20 [Caenorhabditis elegans]
Length = 201
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 15/115 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHH-PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
C + TC YG CKF H E Q A N +C ++ G CK+G
Sbjct: 94 CLSHKRGKTCIYGEQCKFAHGVHELRCQQAKKN------HRNYKTVLCDKFTTTGYCKYG 147
Query: 216 PTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNW 270
C+F H ++ P+ D L +S ++ D+SS +PNW
Sbjct: 148 IRCQFIHR----SMDATNVTRPIDTADFKLDVQSDLSRAFAL----DSSSFLPNW 194
>gi|350595997|ref|XP_003360579.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Sus scrofa]
Length = 407
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D CP+Y++TG+C+FG C H P+S T L + + G
Sbjct: 136 MEKDRAHCPFYIKTGACRFGDKCSRKHSFPASSPTLLIKSMFTTFG 181
>gi|403305264|ref|XP_003943187.1| PREDICTED: tristetraprolin [Saimiri boliviensis boliviensis]
Length = 332
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 115 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 166
Query: 217 TCRFDH 222
C F H
Sbjct: 167 RCHFIH 172
>gi|390478942|ref|XP_002762143.2| PREDICTED: tristetraprolin [Callithrix jacchus]
Length = 326
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 109 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 160
Query: 217 TCRFDH 222
C F H
Sbjct: 161 RCHFIH 166
>gi|126138312|ref|XP_001385679.1| hypothetical protein PICST_36883 [Scheffersomyces stipitis CBS
6054]
gi|126092957|gb|ABN67650.1| zinc finger-containing protein [Scheffersomyces stipitis CBS 6054]
Length = 223
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 23/103 (22%)
Query: 120 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 179
SN Y S+NQ + L C +M G C YG C+F H +
Sbjct: 142 SNFAYHSKNQQQVNTQLYKTEL---------------CVSFMKMGICPYGNKCQFAHGEN 186
Query: 180 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
+ P S+P C+N++ G C++G C F H
Sbjct: 187 ELKTVER----PPKWRSKP----CANWAKLGSCRYGNRCCFKH 221
>gi|111307030|gb|AAI20044.1| ZFP36 protein [Bos taurus]
gi|296477782|tpg|DAA19897.1| TPA: tristetraproline [Bos taurus]
Length = 325
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 213
CR + +G C+YGA C+F H +G L SR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQASRHPKYKTELCHKFYLQGRCP 155
Query: 214 FGPTCRFDH 222
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|440910333|gb|ELR60141.1| Tristetraprolin, partial [Bos grunniens mutus]
Length = 318
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 213
CR + +G C+YGA C+F H +G L SR + +C + + G C
Sbjct: 100 CRTFSESGRCRYGAKCQFAH-----------GLGELRQASRHPKYKTELCHKFYLQGRCP 148
Query: 214 FGPTCRFDH 222
+G C F H
Sbjct: 149 YGSRCHFIH 157
>gi|403355299|gb|EJY77222.1| Tristetraproline, zinc finger protein [Oxytricha trifallax]
Length = 343
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ + N G+C +G C F H +++ + LPS+ +C Y C +G
Sbjct: 42 CKNWENQGSCIFGDQCSFAHGLQQLH-------TKIDLPSKYKTRLCKKYQEELYCPYGV 94
Query: 217 TCRFDH 222
C+F H
Sbjct: 95 RCQFIH 100
>gi|149590799|ref|XP_001521042.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-B-like
[Ornithorhynchus anatinus]
Length = 345
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G CKYG C+F H + L + +C + G C +GP
Sbjct: 133 CRPFEESGACKYGDKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 184
Query: 217 TCRFDH 222
C F H
Sbjct: 185 RCHFIH 190
>gi|449551266|gb|EMD42230.1| hypothetical protein CERSUDRAFT_110762 [Ceriporiopsis subvermispora
B]
Length = 282
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 210
P+C +Y G C G +C + HPKER + G L P + + + + G
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERRIECPDYKRGFCKLGPTCPRKHVRRVACQLYLTG 180
Query: 211 ICKFGPTCRFDHPYAGYP 228
C GP C HP P
Sbjct: 181 FCPLGPECPRGHPKPDIP 198
>gi|348562835|ref|XP_003467214.1| PREDICTED: tristetraprolin-like [Cavia porcellus]
Length = 535
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 323 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 374
Query: 217 TCRFDH 222
C F H
Sbjct: 375 RCHFIH 380
>gi|327288843|ref|XP_003229134.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Anolis
carolinensis]
Length = 624
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
C +GA C + H E+ + +IG C +S++G C+FG TCRF +
Sbjct: 83 CLFGAMCPWQHDLEKYIATKLPDIGD----------CCILFSLFGKCRFGITCRFGGAHL 132
Query: 226 G 226
G
Sbjct: 133 G 133
>gi|302782087|ref|XP_002972817.1| hypothetical protein SELMODRAFT_413447 [Selaginella moellendorffii]
gi|300159418|gb|EFJ26038.1| hypothetical protein SELMODRAFT_413447 [Selaginella moellendorffii]
Length = 568
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C ++ G+C+ G++C++ H + A S A++ LP PG C N+ G C+ G
Sbjct: 287 CYDFITKGSCERGSECRYLHSSDENASSTAAD-NEQQLP--PGS--CFNFFKKGSCEKGD 341
Query: 217 TCRFDH 222
CRF H
Sbjct: 342 DCRFSH 347
>gi|114677174|ref|XP_001136016.1| PREDICTED: tristetraprolin [Pan troglodytes]
Length = 503
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 286 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 337
Query: 217 TCRFDH 222
C F H
Sbjct: 338 RCHFIH 343
>gi|328851409|gb|EGG00564.1| hypothetical protein MELLADRAFT_32022 [Melampsora larici-populina
98AG31]
Length = 63
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTC+Y C+F H ++ + P+ + IC + ++G C +G
Sbjct: 6 CRSWEEKGTCRYSTKCQFAHGQDELR--------PVSRHPKFKTEICRTFCLHGSCPYGK 57
Query: 217 TCRFDH 222
C F H
Sbjct: 58 RCCFLH 63
>gi|71406692|ref|XP_805864.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70869435|gb|EAN84013.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 181
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
+ ++ K+C + G+CKFG C +HH PS A P ASLG
Sbjct: 116 VERNRKTCKQFWENGACKFGSRCLYHHLAPSQGHLADPSVTKASLG 161
>gi|356528629|ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 587
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 15/176 (8%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAG 62
QD+ CP++++TG+C+FG+ C H P T L + S + GL+Y
Sbjct: 171 QDKAHCPFHLKTGACRFGIRCSRVHFYPDKSSTLL-IKNMYSGPGLACDQDQDEGLEYTD 229
Query: 63 SLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNL 122
++R + + V G GN+ + S+ + L
Sbjct: 230 E----EVERC--FEEFYEDVHTEFLKFGEIVNFKVCKNGSFHLRGNV-YVQYKSLDSALL 282
Query: 123 IYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTG--TCKYGADCKFHH 176
Y++ N G AG Q +S NL R C YM +G TC +G C F H
Sbjct: 283 AYNTVN-GRYFAGKQ---VSCQFVNLT-RWKVAICGEYMKSGFKTCSHGTTCNFIH 333
>gi|297742083|emb|CBI33870.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 16/78 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAA------------SNIGPLGLPSRPGQAICS 204
C+ + C YG +C F H ++ A+ + SNI P +R IC+
Sbjct: 161 CKKFYTDEGCPYGDNCTFLHDEQSKARESVAISLGPGAGGGGSNIKPSNWKTR----ICN 216
Query: 205 NYSMYGICKFGPTCRFDH 222
+ + G C FG C F H
Sbjct: 217 KWELTGYCPFGSKCHFAH 234
>gi|344231854|gb|EGV63733.1| hypothetical protein CANTEDRAFT_113770 [Candida tenuis ATCC 10573]
Length = 235
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C +M C YG C+F H + + + P S+P C+N+S +G C++G
Sbjct: 176 CGSFMKNSYCPYGNKCQFAHGECELKRVER----PSNWRSKP----CANWSRFGSCRYGN 227
Query: 217 TCRFDH 222
C F H
Sbjct: 228 RCCFKH 233
>gi|301784037|ref|XP_002927428.1| PREDICTED: tristetraproline-like [Ailuropoda melanoleuca]
Length = 325
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 158
Query: 217 TCRFDH 222
C F H
Sbjct: 159 RCHFIH 164
>gi|299755658|ref|XP_002912126.1| no arches protein [Coprinopsis cinerea okayama7#130]
gi|298411323|gb|EFI28632.1| no arches protein [Coprinopsis cinerea okayama7#130]
Length = 278
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 210
P+C ++ G C G +C + HPKER + N G L P + + + + G
Sbjct: 120 PECWWFAKYGYCSAGDECLYAHPKERRIECPDYNRGFCKLGPTCPRKHVRKVACQLYLTG 179
Query: 211 ICKFGPTCRFDHP 223
C GP C HP
Sbjct: 180 FCPAGPECPKGHP 192
>gi|27819622|ref|NP_776918.1| tristetraprolin [Bos taurus]
gi|1717818|sp|P53781.1|TTP_BOVIN RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Protein
TIS11A; Short=TIS11; AltName: Full=Zinc finger protein
36 homolog; Short=Zfp-36
gi|1100071|gb|AAB05819.1| tristetraprolin [Bos taurus]
Length = 324
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 213
CR + +G C+YGA C+F H +G L SR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQASRHPKYKTELCHKFYLQGRCP 155
Query: 214 FGPTCRFDH 222
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|413947046|gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays]
Length = 166
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 44
C +++RTG+CK+G +C++ HP+P+ + AL G S
Sbjct: 66 CHHFVRTGACKYGDSCRYFHPKPNGVNPALAAPGLGS 102
>gi|356555094|ref|XP_003545874.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 518
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 69/177 (38%), Gaps = 17/177 (9%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG-SMGSSVLPSSGLQYA 61
QD+ CP++++TG+C FG+ C H P T L N G + GL+Y
Sbjct: 182 QDKAHCPFHLKTGACCFGIRCSRVHFYPDKSSTF--LIKNMYNGPGLACDRDQDEGLEYK 239
Query: 62 GSLPTWSLQRAPYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSN 121
++R + + V G + GN+ + S+ +
Sbjct: 240 DE----EVERC--FEEFYEDVHTEFLKFGEVVNFKVCKNGSFHWRGNV-YVQYKSLDSAL 292
Query: 122 LIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTG--TCKYGADCKFHH 176
L Y+S N G AG Q +S NL R C YM +G TC +G C F H
Sbjct: 293 LAYNSVN-GRYFAGKQ---VSCQFVNLT-RWKVAICGEYMKSGFKTCSHGTACNFIH 344
>gi|345305259|ref|XP_001512096.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Ornithorhynchus anatinus]
Length = 243
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 69 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 126
Query: 208 MYGICKFGPTCRFDHPYAGYPINYGLSLPPL 238
+ G C GP+C+F HP P+ PPL
Sbjct: 127 LVGFCPEGPSCKFMHPRFELPMGTA-EQPPL 156
>gi|186479025|ref|NP_174249.2| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
gi|332192982|gb|AEE31103.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
Length = 572
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
C+ G C+++HP + P LP R IC Y + G CKFG C F H
Sbjct: 228 CRNGGSCRYNHPTQ----------LPQELPVRNRLQIC-RYFLRGYCKFGSVCGFQH 273
>gi|350581420|ref|XP_003481031.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Sus scrofa]
Length = 422
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 247 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 304
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 305 LVGFCPEGPSCKFMHPRFELPM 326
>gi|311250935|ref|XP_003124350.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Sus scrofa]
Length = 269
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I + GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDARFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|281344081|gb|EFB19665.1| hypothetical protein PANDA_017207 [Ailuropoda melanoleuca]
Length = 318
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 100 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 151
Query: 217 TCRFDH 222
C F H
Sbjct: 152 RCHFIH 157
>gi|402905502|ref|XP_003915558.1| PREDICTED: tristetraprolin [Papio anubis]
Length = 332
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 115 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 166
Query: 217 TCRFDH 222
C F H
Sbjct: 167 RCHFIH 172
>gi|410927366|ref|XP_003977120.1| PREDICTED: uncharacterized protein LOC101065854 [Takifugu rubripes]
Length = 412
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G CKYG C+F H E + L + C + G C +G
Sbjct: 161 CRSFTESGFCKYGGKCQFAHGAEELRD--------LNRHPKYKTEPCRTFHTIGFCPYGV 212
Query: 217 TCRFDH 222
C F H
Sbjct: 213 RCHFVH 218
>gi|62204272|gb|AAH92716.1| Cth1 protein, partial [Danio rerio]
Length = 257
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 213
C Y TGTCKY C+F H + L +PSR + +C Y G C
Sbjct: 103 CSRYAETGTCKYAERCQFAH-----------GLHDLHVPSRHPKYKTELCRTYHTAGYCV 151
Query: 214 FGPTCRFDH 222
+G C F H
Sbjct: 152 YGTRCLFVH 160
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 56/147 (38%), Gaps = 25/147 (17%)
Query: 83 QSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILS 142
++ +PL+ SPS + P W L Y+ R Q G +H L
Sbjct: 76 EALLPLVESPSPPMTP---WLCSTRYKTELCSRYAETGTCKYAERCQFAHG----LHDLH 128
Query: 143 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSRPGQ- 200
S++ + + CR Y G C YG C F H+ KE+ P RP +
Sbjct: 129 VPSRHPKYKTEL--CRTYHTAGYCVYGTRCLFVHNLKEQ-------------RPIRPRRR 173
Query: 201 -AICSNYSMYGICKFGPTCRFDHPYAG 226
C + +G+C FG C F H G
Sbjct: 174 NVPCRTFRAFGVCPFGNRCHFLHVEGG 200
>gi|355703539|gb|EHH30030.1| hypothetical protein EGK_10599 [Macaca mulatta]
gi|383421389|gb|AFH33908.1| tristetraprolin [Macaca mulatta]
gi|384942444|gb|AFI34827.1| tristetraprolin [Macaca mulatta]
gi|387541058|gb|AFJ71156.1| tristetraprolin [Macaca mulatta]
Length = 326
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 109 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 160
Query: 217 TCRFDH 222
C F H
Sbjct: 161 RCHFIH 166
>gi|168052362|ref|XP_001778619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669937|gb|EDQ56514.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1227
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 157 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
CRY+ +GTC +G C F H+P +R A + +P R + C + G CK
Sbjct: 38 CRYWATSGTCFFGDQCNFAHNPADRAATGKS-------VPKR--EKACKELLLTGYCKNE 88
Query: 216 PT-CRFDHPYAG 226
C ++H G
Sbjct: 89 KNGCEYNHEIPG 100
>gi|384247317|gb|EIE20804.1| hypothetical protein COCSUDRAFT_9841, partial [Coccomyxa
subellipsoidea C-169]
Length = 62
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G+C+YG+ C+F H ++ + P+ + C ++ G C +G
Sbjct: 5 CRSWKESGSCRYGSKCQFAHGEKELK--------PVQRHPKYKTEPCRQFATTGACPYGS 56
Query: 217 TCRFDH 222
CRF H
Sbjct: 57 RCRFIH 62
>gi|355755823|gb|EHH59570.1| hypothetical protein EGM_09710 [Macaca fascicularis]
Length = 326
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 109 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 160
Query: 217 TCRFDH 222
C F H
Sbjct: 161 RCHFIH 166
>gi|291411295|ref|XP_002721911.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Oryctolagus cuniculus]
Length = 269
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|136471|sp|P26651.1|TTP_HUMAN RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=G0/G1
switch regulatory protein 24; AltName: Full=Growth
factor-inducible nuclear protein NUP475; AltName:
Full=Protein TIS11A; Short=TIS11; AltName: Full=Zinc
finger protein 36 homolog; Short=Zfp-36
gi|183443|gb|AAA58489.1| zinc finger transcriptional regulator [Homo sapiens]
gi|183445|gb|AAC37600.1| zinc finger transcriptional regulator [Homo sapiens]
gi|340013|gb|AAA61240.1| tristetraproline [Homo sapiens]
gi|16307209|gb|AAH09693.1| Zinc finger protein 36, C3H type, homolog (mouse) [Homo sapiens]
gi|54112078|gb|AAV28731.1| zinc finger protein 36, C3H type, homolog (mouse) [Homo sapiens]
gi|167773617|gb|ABZ92243.1| zinc finger protein 36, C3H type, homolog (mouse) [synthetic
construct]
gi|189054231|dbj|BAG36751.1| unnamed protein product [Homo sapiens]
gi|190690135|gb|ACE86842.1| zinc finger protein 36, C3H type, homolog (mouse) protein
[synthetic construct]
gi|190691509|gb|ACE87529.1| zinc finger protein 36, C3H type, homolog (mouse) protein
[synthetic construct]
Length = 326
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 109 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 160
Query: 217 TCRFDH 222
C F H
Sbjct: 161 RCHFIH 166
>gi|82268116|sp|Q4SRI6.1|MKRN1_TETNG RecName: Full=Probable E3 ubiquitin-protein ligase makorin-1
gi|47217223|emb|CAF96746.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 17/66 (25%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+M+ G CK G +C++ H +N S+P IC + G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHD--------LTN-------SKPAAMICKFFQK-GNCVFGE 66
Query: 217 TCRFDH 222
CRFDH
Sbjct: 67 RCRFDH 72
>gi|332867114|ref|XP_519234.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 7 [Pan troglodytes]
gi|397489494|ref|XP_003815761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Pan paniscus]
gi|410214168|gb|JAA04303.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249442|gb|JAA12688.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289414|gb|JAA23307.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353009|gb|JAA43108.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 269
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|395332863|gb|EJF65241.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 2372
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 11/77 (14%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNI------GPLGLPSRPG-----QAICSN 205
CR+Y G C G+DC F H ++S S+ P G RP +C
Sbjct: 7 CRFYGKPGGCSRGSDCHFQHVDGGSSESNISSGSSRGRGAPRGGAPRPAIPRAPHGVCDF 66
Query: 206 YSMYGICKFGPTCRFDH 222
Y G C G CRF H
Sbjct: 67 YYSRGFCNRGSDCRFRH 83
>gi|145507218|ref|XP_001439564.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406759|emb|CAK72167.1| unnamed protein product [Paramecium tetraurelia]
Length = 200
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 146 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
QN RP C+ +MN G C YG+ C++ HP+ I + + + + Q ICSN
Sbjct: 95 QNYKTRP----CKNFMNDGWCNYGSRCQYIHPENSIIKKKTHKL--ISQDKQAQQKICSN 148
>gi|410983058|ref|XP_003997861.1| PREDICTED: tristetraprolin [Felis catus]
Length = 325
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 158
Query: 217 TCRFDH 222
C F H
Sbjct: 159 RCHFIH 164
>gi|397482139|ref|XP_003812290.1| PREDICTED: tristetraprolin [Pan paniscus]
gi|410299430|gb|JAA28315.1| zinc finger protein 36, C3H type, homolog [Pan troglodytes]
gi|410333007|gb|JAA35450.1| zinc finger protein 36, C3H type, homolog [Pan troglodytes]
Length = 332
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 115 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 166
Query: 217 TCRFDH 222
C F H
Sbjct: 167 RCHFIH 172
>gi|410988239|ref|XP_004000394.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Felis catus]
Length = 519
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H PSS T L + + G
Sbjct: 219 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFG 264
>gi|393539038|ref|NP_003398.2| tristetraprolin [Homo sapiens]
gi|119577289|gb|EAW56885.1| zinc finger protein 36, C3H type, homolog (mouse), isoform CRA_a
[Homo sapiens]
gi|119577290|gb|EAW56886.1| zinc finger protein 36, C3H type, homolog (mouse), isoform CRA_a
[Homo sapiens]
Length = 332
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 115 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 166
Query: 217 TCRFDH 222
C F H
Sbjct: 167 RCHFIH 172
>gi|432115228|gb|ELK36738.1| Cleavage and polyadenylation specificity factor subunit 4 [Myotis
davidii]
Length = 269
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|145524992|ref|XP_001448318.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415862|emb|CAK80921.1| unnamed protein product [Paramecium tetraurelia]
Length = 212
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 134 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 193
++ I + P + + CR Y G CKYG C F H A++ ++
Sbjct: 33 VQRKLRIKKCYQEEEPLKKKKDLCRNYQMNGCCKYGDQCFFIHTP---AKTESTLYSSTS 89
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDH 222
++P C Y G C FGP C+F H
Sbjct: 90 TKTKP----CKRY-FSGFCGFGPKCQFLH 113
>gi|5729939|ref|NP_006684.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Homo sapiens]
gi|402862924|ref|XP_003895788.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Papio anubis]
gi|426357076|ref|XP_004045874.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Gorilla gorilla gorilla]
gi|37999487|sp|O95639.1|CPSF4_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit; AltName: Full=NS1 effector domain-binding
protein 1; Short=Neb-1; AltName: Full=No arches homolog
gi|4098572|gb|AAD00321.1| no arches [Homo sapiens]
gi|49457318|emb|CAG46958.1| CPSF4 [Homo sapiens]
gi|51094626|gb|EAL23878.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597073|gb|EAW76667.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|119597074|gb|EAW76668.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|124302214|gb|ABN05292.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|261861580|dbj|BAI47312.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
gi|355560471|gb|EHH17157.1| hypothetical protein EGK_13489 [Macaca mulatta]
gi|355747522|gb|EHH52019.1| hypothetical protein EGM_12382 [Macaca fascicularis]
gi|380809012|gb|AFE76381.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|383413433|gb|AFH29930.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|384940110|gb|AFI33660.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
Length = 269
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|426388672|ref|XP_004060757.1| PREDICTED: tristetraprolin [Gorilla gorilla gorilla]
Length = 332
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 115 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 166
Query: 217 TCRFDH 222
C F H
Sbjct: 167 RCHFIH 172
>gi|126334486|ref|XP_001363797.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Monodelphis domestica]
gi|395514828|ref|XP_003761614.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Sarcophilus harrisii]
Length = 269
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|449297565|gb|EMC93583.1| hypothetical protein BAUCODRAFT_133464 [Baudoinia compniacensis
UAMH 10762]
Length = 421
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 27/97 (27%)
Query: 134 AGAQMH------ILSASSQNLPERPD--QPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 185
AG H ++ AS+ P RP +P C + GTC YG C+F H ++
Sbjct: 193 AGVDFHRTKNGNLIRASALADPARPAPLRPQCENFTKHGTCPYGPICRFTHDPNKV---- 248
Query: 186 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
AIC ++ G C G +C H
Sbjct: 249 ---------------AICKDFLKAGTCALGDSCDMSH 270
>gi|73957940|ref|XP_850149.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Canis lupus familiaris]
Length = 269
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|395852822|ref|XP_003798929.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Otolemur garnettii]
Length = 269
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|417398298|gb|JAA46182.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 279
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|74204729|dbj|BAE35432.1| unnamed protein product [Mus musculus]
Length = 262
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 44 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 95
Query: 217 TCRFDH 222
C F H
Sbjct: 96 RCHFIH 101
>gi|348536391|ref|XP_003455680.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Oreochromis niloticus]
Length = 431
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 17/66 (25%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+M+ G CK G +C++ H S+P IC + G C FG
Sbjct: 24 CRYFMH-GLCKEGENCRYSHDL---------------TSSKPASMICKFFQK-GNCAFGD 66
Query: 217 TCRFDH 222
CRF+H
Sbjct: 67 RCRFEH 72
>gi|281349874|gb|EFB25458.1| hypothetical protein PANDA_013548 [Ailuropoda melanoleuca]
Length = 252
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|194763985|ref|XP_001964112.1| GF21384 [Drosophila ananassae]
gi|190619037|gb|EDV34561.1| GF21384 [Drosophila ananassae]
Length = 470
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + C + G C +GP
Sbjct: 143 CRPFEEAGECKYGEKCQFAH--------GFHELRNLQRHPKYKTEYCRTFHSVGFCPYGP 194
Query: 217 TCRFDH 222
C F H
Sbjct: 195 RCHFVH 200
>gi|428172249|gb|EKX41160.1| hypothetical protein GUITHDRAFT_42616, partial [Guillardia theta
CCMP2712]
Length = 66
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG--QAICSNYSMYGICKF 214
CR +M GTC++ C F H ++ + P R +C+NY G CK+
Sbjct: 6 CREFMQKGTCQFERICSFAHGRDELRS-------PFDTSKRWNYKTELCANYLKLGRCKY 58
Query: 215 GPTCRFDH 222
C F H
Sbjct: 59 MEHCLFAH 66
>gi|395859716|ref|XP_003802178.1| PREDICTED: tristetraprolin [Otolemur garnettii]
Length = 328
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 111 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 162
Query: 217 TCRFDH 222
C F H
Sbjct: 163 RCHFIH 168
>gi|326437098|gb|EGD82668.1| mRNA 3'-end-processing protein yth1 [Salpingoeca sp. ATCC 50818]
Length = 398
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSA------ASNIGPLGLPSRPGQAICSNY 206
P+C ++ N G C+ G DC F H P++R A N L R +C NY
Sbjct: 94 PECHFFRNDGHCEKGKDCLFLHITPEQRRRDCAWYWRGFCKNGANCRLRHRKA-VLCPNY 152
Query: 207 SMYGICKFGPTCRFDHPYAGYPINYGLS 234
+ G C GP C+ HP P + ++
Sbjct: 153 -LVGFCPKGPDCQHMHPRWELPTSNAIN 179
>gi|156717766|ref|NP_001096423.1| zinc finger protein 36, C3H1 type-like 2 [Xenopus (Silurana)
tropicalis]
gi|306756031|sp|A4IIN5.1|TISD_XENTR RecName: Full=Zinc finger protein 36, C3H1 type-like 2
gi|134026262|gb|AAI36092.1| zfp36l2 protein [Xenopus (Silurana) tropicalis]
Length = 333
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G CKYG C+F H + L + +C + G C +GP
Sbjct: 107 CRPFEESGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 158
Query: 217 TCRFDH 222
C H
Sbjct: 159 RCHLIH 164
>gi|149755350|ref|XP_001494963.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Equus caballus]
gi|301777646|ref|XP_002924237.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Ailuropoda melanoleuca]
gi|348568558|ref|XP_003470065.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Cavia porcellus]
gi|410984387|ref|XP_003998510.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Felis catus]
gi|431908022|gb|ELK11629.1| Cleavage and polyadenylation specificity factor subunit 4 [Pteropus
alecto]
Length = 269
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|156084372|ref|XP_001609669.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796921|gb|EDO06101.1| hypothetical protein BBOV_II001430 [Babesia bovis]
Length = 227
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 14/109 (12%)
Query: 128 NQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH-----PKERIA 182
N ++ ++ S + + P +P C+YY TG+C +G+DC+F H + +
Sbjct: 29 NDWEIPENKDLNCPSRTVSDTPITDHRPLCKYYYRTGSCLHGSDCRFSHNCLPLTSKELK 88
Query: 183 QSAASNIGPLGLP---------SRPGQAICSNYSMYGICKFGPTCRFDH 222
+GP PG +C N + G C C+F H
Sbjct: 89 LCRYFLMGPTNCKYTAAECKYSHEPGLFLCRNNIVNGECNNLLRCKFKH 137
>gi|348670357|gb|EGZ10179.1| hypothetical protein PHYSODRAFT_338857 [Phytophthora sojae]
Length = 269
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 218
Y G CK+G C F H + + +S + + + +C N++ C+FG C
Sbjct: 210 YDFMRGECKWGDRCNFEHTETKAMRSGRA-------LDKTRRRVCDNFARTKNCRFGDKC 262
Query: 219 RFDH 222
F H
Sbjct: 263 LFSH 266
>gi|242065404|ref|XP_002453991.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
gi|241933822|gb|EES06967.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
Length = 263
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
QD+ CP++++TG+C+FGV C H P T L
Sbjct: 210 QDKAHCPFHLKTGACRFGVRCSRVHFYPDKSSTLL 244
>gi|294878046|ref|XP_002768253.1| hypothetical protein Pmar_PMAR004934 [Perkinsus marinus ATCC 50983]
gi|239870456|gb|EER00971.1| hypothetical protein Pmar_PMAR004934 [Perkinsus marinus ATCC 50983]
Length = 454
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPL 39
C +Y + G CKFG AC+F H +P ++ L
Sbjct: 136 CKFYYKNGKCKFGKACRFRHERPKQAVASMVL 167
>gi|145474127|ref|XP_001423086.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390146|emb|CAK55688.1| unnamed protein product [Paramecium tetraurelia]
Length = 141
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 149 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 208
E+ C+ ++ G+CKY +C F H + +N ++P C NY
Sbjct: 40 EEKKKTEICKNFLFKGSCKYQENCSFAHGDNELRDRVPAN---ENFKTKP----CKNYHK 92
Query: 209 YGICKFGPTCRFDH 222
+G C +G C++ H
Sbjct: 93 FGTCSYGLRCQYLH 106
>gi|119597068|gb|EAW76662.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_a [Homo sapiens]
Length = 216
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 41 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 98
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 99 LVGFCPEGPSCKFMHPRFELPM 120
>gi|341899233|gb|EGT55168.1| hypothetical protein CAEBREN_30011 [Caenorhabditis brenneri]
Length = 208
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 36/102 (35%), Gaps = 28/102 (27%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 208
C Y TC YG C+F H + L LP P +C +S
Sbjct: 92 CDSYKRNQTCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 140
Query: 209 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA 250
G CK+ C+F H P L L S ++N+ A
Sbjct: 141 TGNCKYETRCQFIHKLVN---------PTLLALASGMLNNTA 173
>gi|395756908|ref|XP_002834549.2| PREDICTED: tristetraprolin-like, partial [Pongo abelii]
Length = 233
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 120 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|344289700|ref|XP_003416579.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Loxodonta africana]
Length = 269
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|5360265|dbj|BAA81905.1| HrZF-1 [Halocynthia roretzi]
Length = 621
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 131 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 190
D G IL++SS+ R C+ G C YGA C F H ++ +
Sbjct: 527 DFAHGTDDLILNSSSK---PRYKTRMCKVLQQIGRCPYGAQCTFAHKQDELRTD------ 577
Query: 191 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
L L + IC+ ++M C G C F H
Sbjct: 578 -LSLIYKYKTEICNVWAMGLRCSHGSDCHFAH 608
>gi|37665522|dbj|BAC99018.1| Makorin1 [Seriola quinqueradiata]
Length = 418
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 17/66 (25%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+M+ G CK G +C++ H +N S+P IC + G C FG
Sbjct: 7 CRYFMH-GLCKEGDNCRYSHD--------LTN-------SKPAAMIC-KFFQKGNCVFGD 49
Query: 217 TCRFDH 222
CRF+H
Sbjct: 50 RCRFEH 55
>gi|254584178|ref|XP_002497657.1| ZYRO0F10560p [Zygosaccharomyces rouxii]
gi|238940550|emb|CAR28724.1| ZYRO0F10560p [Zygosaccharomyces rouxii]
Length = 342
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + GTC+YG C+F H + N ++P C N++ G C +G
Sbjct: 246 CESFTTKGTCRYGNKCQFAHGLSELKFRQFGN----NFRTKP----CINWTKLGYCPYGK 297
Query: 217 TCRFDH 222
C F H
Sbjct: 298 RCCFKH 303
>gi|47086099|ref|NP_998431.1| probable helicase with zinc finger domain [Danio rerio]
gi|82185991|sp|Q6NYU2.1|HELZ_DANRE RecName: Full=Probable helicase with zinc finger domain
gi|42542947|gb|AAH66461.1| Zgc:77407 [Danio rerio]
Length = 1860
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 112 LSPTSIAGSNLIYSSRNQGDLGAGAQMH-----ILSASSQNLPERPDQPDCRYYMNTGTC 166
LS A S +++S N+ D+ G Q + S+ L C+ ++ G C
Sbjct: 132 LSEIEAARSKVVFSEENEEDVQEGWQFRPPPRGVTSSEEYTL--------CKRFLEQGLC 183
Query: 167 KYGADCKFHHPKERIAQ 183
+YGA C H +E + +
Sbjct: 184 RYGAQCTSAHSQEELTE 200
>gi|118376804|ref|XP_001021583.1| Zinc finger protein CTH1 [Tetrahymena thermophila]
gi|89303350|gb|EAS01338.1| Zinc finger protein CTH1 [Tetrahymena thermophila SB210]
Length = 279
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 146 QNL--PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 203
QNL ER CR Y GTC YG C++ H + + Q +RP C
Sbjct: 71 QNLIQKERYKTELCRNYQIHGTCNYGKKCQYAHGRHELQQKPERKTNQY-YKTRP----C 125
Query: 204 SNYSMYGICKFGPTCRFDH 222
+ C +G C+++H
Sbjct: 126 KEFFNTLTCPYGQRCKYNH 144
>gi|291389990|ref|XP_002711511.1| PREDICTED: zinc finger protein 36, C3H type, homolog [Oryctolagus
cuniculus]
Length = 305
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 88 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 139
Query: 217 TCRFDH 222
C F H
Sbjct: 140 RCHFIH 145
>gi|119604356|gb|EAW83950.1| makorin, ring finger protein, 1, isoform CRA_b [Homo sapiens]
Length = 258
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSH----------------DLSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|148231564|ref|NP_001086337.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
laevis]
gi|82183649|sp|Q6DJP7.1|CPSF4_XENLA RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|49522087|gb|AAH75128.1| MGC81862 protein [Xenopus laevis]
Length = 269
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPINYGLSLPPL 238
+ G C GP C+F HP P+ PPL
Sbjct: 152 LVGFCIEGPNCKFMHPRFELPMGTA-EQPPL 181
>gi|71406680|ref|XP_805858.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70869429|gb|EAN84007.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 276
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
+ ++ K+C + G+CKFG C +HH PS A P ASLG
Sbjct: 116 VERNRKTCKQFWENGACKFGSRCLYHHLAPSQGHLADPSVTKASLG 161
>gi|432090696|gb|ELK24036.1| Tristetraprolin [Myotis davidii]
Length = 320
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q++ + C + + G C +G
Sbjct: 103 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTEFCHKFYLQGRCPYGS 154
Query: 217 TCRFDH 222
C F H
Sbjct: 155 RCHFIH 160
>gi|307199310|gb|EFN79963.1| Makorin-1 [Harpegnathos saltator]
Length = 398
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+ N G C+ G +C+F H + + +N S P + + GIC+FG
Sbjct: 11 CRYFKN-GVCREGNNCRFRHVQGTRDDADVNNAETTS--SGPIFNVTCRFFKQGICRFGN 67
Query: 217 TCRFDH 222
C F H
Sbjct: 68 QCHFRH 73
>gi|242052467|ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
gi|241927354|gb|EES00499.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
Length = 164
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNA 43
C +++RTG+CK+G +C++ HP+P + AL G+
Sbjct: 66 CHHFVRTGTCKYGDSCRYFHPKPDGVNPALAAPGSG 101
>gi|443899276|dbj|GAC76607.1| predicted metal-dependent hydrolase [Pseudozyma antarctica T-34]
Length = 407
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 12/74 (16%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 214
CR + G C YG C++ H +E + + LP P C + +YG C +
Sbjct: 319 CRNWEERGKCLYGNRCQYAHGEEELRR----------LPRDPRWKTRPCKVFMLYGHCPY 368
Query: 215 GPTCRFDHPYAGYP 228
C F H G P
Sbjct: 369 ASRCCFRHDQGGVP 382
>gi|189525066|ref|XP_001920562.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Danio rerio]
Length = 635
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
+D+ +CP++++TG+C+FG C H P+S T + S G
Sbjct: 180 KDKANCPFFLKTGACRFGDRCSRKHDHPASSCTLMVRGMFVSFG 223
>gi|58263406|ref|XP_569113.1| no arches protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134108566|ref|XP_777234.1| hypothetical protein CNBB4640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819807|sp|P0CS65.1|YTH1_CRYNB RecName: Full=mRNA 3'-end-processing protein YTH1
gi|338819808|sp|P0CS64.1|YTH1_CRYNJ RecName: Full=mRNA 3'-end-processing protein YTH1
gi|50259919|gb|EAL22587.1| hypothetical protein CNBB4640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223763|gb|AAW41806.1| no arches protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 332
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 209
P C +++ G C+ G +C + HP++R + N G L P+ P + I C Y+
Sbjct: 125 PVCIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAA- 183
Query: 210 GICKFGPTCRFDHP 223
G C G C+ HP
Sbjct: 184 GFCPDGKDCKLAHP 197
>gi|327268246|ref|XP_003218909.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Anolis carolinensis]
Length = 487
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
+D +CP+Y++TG+C+FG C H P+S T L
Sbjct: 196 KDRANCPFYIKTGACRFGDRCSRKHNYPTSSQTLL 230
>gi|301788732|ref|XP_002929785.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ailuropoda
melanoleuca]
Length = 464
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H PSS T L + + G
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFG 209
>gi|312072010|ref|XP_003138871.1| zinc finger C-x8-C-x5-C-x3-H type containing protein [Loa loa]
Length = 347
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 32/127 (25%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+ N C+ G+ C F H + S+P + Y + G C FG
Sbjct: 15 CRYFAN-NICREGSSCPFSHDRN----------------SKPDRTC--RYYLIGKCAFGT 55
Query: 217 TCRFDH---PYAGYPINYGLSLP-----PLSILDSSLMNHQAISATHSIETSP-----DA 263
+CR+DH P G S P ++++ N + + ++ S DA
Sbjct: 56 SCRYDHKRPPLDGIKTVKSFSRVTENSNPTKVVENGCSNDEIATTAAAVNRSSHVFSVDA 115
Query: 264 SSKIPNW 270
+ IP+W
Sbjct: 116 AEFIPSW 122
>gi|189069316|dbj|BAG36348.1| unnamed protein product [Homo sapiens]
Length = 479
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 170 MEKDRANCPFYSKTGACRFGDRCSRRHNFPTSSPTLLIKSMFTTFG 215
>gi|281340363|gb|EFB15947.1| hypothetical protein PANDA_020065 [Ailuropoda melanoleuca]
Length = 398
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
M +D +CP+Y +TG+C+FG C H PSS T L + + G P +
Sbjct: 98 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 157
Query: 58 LQYA 61
L+Y+
Sbjct: 158 LEYS 161
>gi|256052756|ref|XP_002569918.1| zinc finger protein [Schistosoma mansoni]
gi|353232204|emb|CCD79559.1| putative zinc finger protein [Schistosoma mansoni]
Length = 273
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 16/71 (22%)
Query: 157 CRYYMNT--GTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRP--GQAICSNYSMYGI 211
C+ Y+N+ G C YG C+F H I L P P IC +Y ++G
Sbjct: 140 CKRYLNSSNGDCSYGNKCQFAHG-----------INELRFAPRHPRYKTEICYSYHVFGT 188
Query: 212 CKFGPTCRFDH 222
C +G C F H
Sbjct: 189 CNYGKRCDFIH 199
>gi|149051562|gb|EDM03735.1| zinc finger protein 36, C3H type-like 1 [Rattus norvegicus]
Length = 220
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 217 TCRFDH 222
C F H
Sbjct: 172 RCHFIH 177
>gi|50554803|ref|XP_504810.1| YALI0F00242p [Yarrowia lipolytica]
gi|49650680|emb|CAG77612.1| YALI0F00242p [Yarrowia lipolytica CLIB122]
Length = 210
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 6 KSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNA 43
K C ++M+TG C+FG C+F H + + T +G A
Sbjct: 120 KKCSFFMKTGKCRFGDKCRFSHDKSGATATGSASSGGA 157
>gi|355731037|gb|AES10395.1| zinc finger , RNA-binding motif and serine/arginine rich 2 [Mustela
putorius furo]
Length = 463
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H PSS T L + + G
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFG 209
>gi|358420073|ref|XP_003584415.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 686
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 399 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 444
>gi|54804|emb|CAA32807.1| unnamed protein product [Mus musculus]
Length = 183
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 53 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 104
Query: 217 TCRFDH 222
C F H
Sbjct: 105 RCHFIH 110
>gi|341877927|gb|EGT33862.1| hypothetical protein CAEBREN_04146 [Caenorhabditis brenneri]
Length = 444
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 19/67 (28%)
Query: 156 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
DCRYY+N G C G C F H + AA N + +C ++M G C FG
Sbjct: 7 DCRYYVN-GICSKGNACAFIHDQ------AARN-----------EYVCQ-FNMAGKCSFG 47
Query: 216 PTCRFDH 222
CRF H
Sbjct: 48 QACRFKH 54
>gi|71834630|ref|NP_001025418.1| zinc finger protein 36, C3H type, homolog [Danio rerio]
gi|66911936|gb|AAH97188.1| Zgc:114130 [Danio rerio]
Length = 329
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H E + L + C + G C +G
Sbjct: 81 CRTFAERGLCKYGGKCQFAHGPEELRD--------LNRHPKYKTEPCRTFHSIGFCPYGI 132
Query: 217 TCRFDH 222
C F H
Sbjct: 133 RCHFVH 138
>gi|6320355|ref|NP_010435.1| Cth1p [Saccharomyces cerevisiae S288c]
gi|52788259|sp|P47976.2|CTH1_YEAST RecName: Full=mRNA decay factor CTH1; AltName:
Full=Cysteine-three-histidine protein 1
gi|899400|emb|CAA90373.1| unknown [Saccharomyces cerevisiae]
gi|45269273|gb|AAS56016.1| YDR151C [Saccharomyces cerevisiae]
gi|151942135|gb|EDN60491.1| CCCH zinc finger protein [Saccharomyces cerevisiae YJM789]
gi|190404893|gb|EDV08160.1| zinc finger protein CTH1 [Saccharomyces cerevisiae RM11-1a]
gi|256269333|gb|EEU04635.1| Cth1p [Saccharomyces cerevisiae JAY291]
gi|259145391|emb|CAY78655.1| Cth1p [Saccharomyces cerevisiae EC1118]
gi|285811169|tpg|DAA11993.1| TPA: Cth1p [Saccharomyces cerevisiae S288c]
Length = 325
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G CKYG C+F H + SN ++P C N+S G C +G
Sbjct: 210 CESFTIKGYCKYGNKCQFAHGLNELKFKKKSN----NYRTKP----CINWSKLGYCPYGK 261
Query: 217 TCRFDH 222
C F H
Sbjct: 262 RCCFKH 267
>gi|323305506|gb|EGA59248.1| Cth1p [Saccharomyces cerevisiae FostersB]
gi|323338249|gb|EGA79481.1| Cth1p [Saccharomyces cerevisiae Vin13]
gi|323349278|gb|EGA83506.1| Cth1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355682|gb|EGA87499.1| Cth1p [Saccharomyces cerevisiae VL3]
gi|365766632|gb|EHN08128.1| Cth1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 324
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G CKYG C+F H + SN ++P C N+S G C +G
Sbjct: 209 CESFTIKGYCKYGNKCQFAHGLNELKFKKKSN----NYRTKP----CINWSKLGYCPYGK 260
Query: 217 TCRFDH 222
C F H
Sbjct: 261 RCCFKH 266
>gi|52548270|gb|AAU82119.1| POS-1 [Caenorhabditis remanei]
Length = 261
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 19/72 (26%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 208
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGDQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 209 YGICKFGPTCRF 220
G CK+G C+F
Sbjct: 155 TGNCKYGTRCQF 166
>gi|350606345|ref|NP_001108269.2| zinc finger protein 36, C3H type-like 2, gene 2 [Xenopus laevis]
Length = 289
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR---PGQAICSNYSMYGICK 213
CR + GTC YG C F H + + S P P R P + C + G C
Sbjct: 99 CRSFHVLGTCNYGLRCLFIHSPQERREPPVSPDTPRIPPRRHTGPYRERCRLWRSPGGCP 158
Query: 214 FGPTCRFDHP 223
+G C F HP
Sbjct: 159 YGARCHFQHP 168
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 19/71 (26%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
P + CR + + G C YGA C F HPK + C +++ G
Sbjct: 143 PYRERCRLWRSPGGCPYGARCHFQHPKS-------------------VREACRHFAALGE 183
Query: 212 CKFGPTCRFDH 222
C +G C F H
Sbjct: 184 CPYGARCHFSH 194
>gi|359082061|ref|XP_003588255.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 130
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 27 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 72
>gi|395821701|ref|XP_003784175.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 482
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
+ +D +CP+Y +TG+C+FG C H P+S T L + + G P +G
Sbjct: 160 VEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDAG 219
Query: 58 LQYA 61
L+Y+
Sbjct: 220 LEYS 223
>gi|390604805|gb|EIN14196.1| hypothetical protein PUNSTDRAFT_49022 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 286
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQ-----SAASNIGPLGLPSRPGQAICSNYSMY 209
P+C +Y G C G +C + HPKER + +GP P + + + +
Sbjct: 120 PECWWYAKYGYCSAGDECLYAHPKERKIECPDYRRGFCKLGPT-CPRKHIRRVACQLYLS 178
Query: 210 GICKFGPTCRFDHP 223
G C GP C HP
Sbjct: 179 GFCPMGPDCPRGHP 192
>gi|349577214|dbj|GAA22383.1| K7_Cth1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300264|gb|EIW11355.1| Cth1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 325
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G CKYG C+F H + SN ++P C N+S G C +G
Sbjct: 210 CESFTIKGYCKYGNKCQFAHGLNELKFKKKSN----NYRTKP----CINWSKLGYCPYGK 261
Query: 217 TCRFDH 222
C F H
Sbjct: 262 RCCFKH 267
>gi|346320383|gb|EGX89984.1| spindle poison sensitivity protein Scp3, putative [Cordyceps
militaris CM01]
Length = 805
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 52/131 (39%), Gaps = 36/131 (27%)
Query: 119 GSNLIYSSRNQGDLGAGAQMHILSASSQ------NLPE---RPDQPD-------CRYYMN 162
G+ L++ R G G + LSA+ Q +LP RP P C++Y
Sbjct: 228 GAALVFFCRASGQAGQHSAHPALSATDQLPTRYPSLPRLVCRPRAPRAYTAHVPCKFYRQ 287
Query: 163 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
G C+ G C F H LG+ S + +C Y G CKFGP C H
Sbjct: 288 -GACQAGNACPFSHE--------------LGVAS---ETVC-KYFAKGNCKFGPKCANMH 328
Query: 223 PY-AGYPINYG 232
G +NYG
Sbjct: 329 VLPDGRRVNYG 339
>gi|326435888|gb|EGD81458.1| DUS3L protein [Salpingoeca sp. ATCC 50818]
Length = 612
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNI-GPLGLPSRPGQAICSNYSMYGICKFG 215
C + +G C YG CKF H ++ Q+ ++ P R G G C+FG
Sbjct: 102 CLAFAKSGACSYGDKCKFEHDFDKYLQTKPPDVDAPCPFWEREG----------GKCRFG 151
Query: 216 PTCRF 220
CRF
Sbjct: 152 IMCRF 156
>gi|163916509|gb|AAI57454.1| LOC100137650 protein [Xenopus laevis]
Length = 279
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR---PGQAICSNYSMYGICK 213
CR + GTC YG C F H + + S P P R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVSPDTPRIPPRRHTGPYRERCRLWRSPGGCP 148
Query: 214 FGPTCRFDHP 223
+G C F HP
Sbjct: 149 YGARCHFQHP 158
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 19/71 (26%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
P + CR + + G C YGA C F HPK + C +++ G
Sbjct: 133 PYRERCRLWRSPGGCPYGARCHFQHPKS-------------------VREACRHFAALGE 173
Query: 212 CKFGPTCRFDH 222
C +G C F H
Sbjct: 174 CPYGARCHFSH 184
>gi|444707445|gb|ELW48720.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Tupaia chinensis]
Length = 612
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 294 MEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIRSMFTTFG 339
>gi|1020083|gb|AAB39897.1| zinc finger protein [Saccharomyces cerevisiae]
Length = 325
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G CKYG C+F H + SN ++P C N+S G C +G
Sbjct: 210 CESFTIKGYCKYGNKCQFAHGLNELKFKKKSN----NYRTKP----CINWSKLGYCPYGK 261
Query: 217 TCRFDH 222
C F H
Sbjct: 262 RCCFKH 267
>gi|50555936|ref|XP_505376.1| YALI0F13497p [Yarrowia lipolytica]
gi|49651246|emb|CAG78183.1| YALI0F13497p [Yarrowia lipolytica CLIB122]
Length = 395
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + TG+C YG C+F H + + + P + +C N+ G C +
Sbjct: 337 CSSFQKTGSCSYGEKCQFAHGEHELKN--------VDRPPKWRSKLCQNWLRTGTCAYND 388
Query: 217 TCRFDH 222
C F H
Sbjct: 389 RCCFKH 394
>gi|327288272|ref|XP_003228852.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Anolis carolinensis]
Length = 269
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKYGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP C+F HP P+
Sbjct: 152 LVGFCPEGPACKFMHPRFELPM 173
>gi|444732084|gb|ELW72403.1| Tristetraprolin [Tupaia chinensis]
Length = 377
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 162 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 213
Query: 217 TCRFDH 222
C F H
Sbjct: 214 RCHFIH 219
>gi|156376344|ref|XP_001630321.1| predicted protein [Nematostella vectensis]
gi|156217339|gb|EDO38258.1| predicted protein [Nematostella vectensis]
Length = 752
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 193
D P CRYY+ C +GA+C + HP++ IA N+GP+
Sbjct: 44 EDVPVCRYYLE-DRCMFGAECWYRHPEQDIA-----NVGPMA 79
>gi|119619308|gb|EAW98902.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform
CRA_c [Homo sapiens]
Length = 344
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
M +D +CP+Y +TG+C+FG C H P+S T L + + G P +
Sbjct: 27 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 86
Query: 58 LQYA 61
L+Y+
Sbjct: 87 LEYS 90
>gi|407416712|gb|EKF37774.1| hypothetical protein MOQ_002026 [Trypanosoma cruzi marinkellei]
Length = 279
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
+ ++ K+C + G+CKFG C +HH PS A P AS+G
Sbjct: 119 VERNRKACRQFWENGACKFGSRCLYHHSAPSRGHFAAPSVTKASVG 164
>gi|119597069|gb|EAW76663.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_b [Homo sapiens]
Length = 255
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPIN 230
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPMG 174
>gi|32566849|ref|NP_505927.2| Protein CCCH-1, isoform b [Caenorhabditis elegans]
gi|24817304|emb|CAA98476.2| Protein CCCH-1, isoform b [Caenorhabditis elegans]
Length = 419
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 42/141 (29%)
Query: 114 PTSIAGSNLIYSSRNQGDLGA-----GAQ------MHILSASS-----QNLPER------ 151
PTS AGS+L +S LGA G+Q +++SASS Q P
Sbjct: 90 PTSFAGSSLFGASEFGNPLGAPGTPIGSQHQMSIGQNLVSASSPYSTPQLTPMATPNGQA 149
Query: 152 --PDQPD------CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQA 201
P P CR +M+ G C YG C++ H + +P P
Sbjct: 150 PPPKNPKLYKTELCRSWMDHGRCNYGERCQYAH----------GELEKRPVPRHPKYKTE 199
Query: 202 ICSNYSMYGICKFGPTCRFDH 222
C ++ G C +GP C F H
Sbjct: 200 ACQSFHQSGYCPYGPRCHFIH 220
>gi|2833265|sp|Q15695.2|U2AFL_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 1
gi|1293653|gb|AAA98669.1| U2AFBPL [Homo sapiens]
Length = 479
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 170 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 215
>gi|410900360|ref|XP_003963664.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like
[Takifugu rubripes]
Length = 419
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G+CKYG C+F H + L + C + G C +GP
Sbjct: 135 CRPFEESGSCKYGEKCQFAH--------GFHELRSLSRHPKYKTEPCRTFHTIGFCPYGP 186
Query: 217 TCRFDH 222
C F H
Sbjct: 187 RCHFIH 192
>gi|395841461|ref|XP_003793555.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 491
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
M +D +CP+Y +TG+C+FG C H P+S T L + + G P +
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFGMEQCRRDDYDPDAS 223
Query: 58 LQYA 61
L+Y+
Sbjct: 224 LEYS 227
>gi|393907027|gb|EFO25206.2| zinc finger protein [Loa loa]
Length = 373
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 32/127 (25%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+ N C+ G+ C F H + S+P + Y + G C FG
Sbjct: 15 CRYFAN-NICREGSSCPFSHDRN----------------SKPDRT--CRYYLIGKCAFGT 55
Query: 217 TCRFDH---PYAGYPINYGLSLP-----PLSILDSSLMNHQAISATHSIETSP-----DA 263
+CR+DH P G S P ++++ N + + ++ S DA
Sbjct: 56 SCRYDHKRPPLDGIKTVKSFSRVTENSNPTKVVENGCSNDEIATTAAAVNRSSHVFSVDA 115
Query: 264 SSKIPNW 270
+ IP+W
Sbjct: 116 AEFIPSW 122
>gi|46309479|ref|NP_996938.1| butyrate response factor 2 [Danio rerio]
gi|42542610|gb|AAH66478.1| Zgc:76924 [Danio rerio]
Length = 310
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+CKYG C+F H + L + C + G C +GP
Sbjct: 60 CRPFEENGSCKYGEKCQFAH--------GYHELRNLSRHPKYKTEPCRTFHTIGFCPYGP 111
Query: 217 TCRFDH 222
C F H
Sbjct: 112 RCHFIH 117
>gi|301625362|ref|XP_002941871.1| PREDICTED: muscleblind-like protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 399
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 22/160 (13%)
Query: 23 CKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSL-PTWSLQRAPYLSSRLQG 81
CK+ HP P L T L + G +L + + + +Q A ++ P +Q P S
Sbjct: 66 CKYLHP-PPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMIPGTQIQPVPMFS----- 119
Query: 82 TQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSPTSIAGSNLIYSSRNQGDLGAGAQMHI 140
V+PS +N Y+G + P L P I + + + N G A
Sbjct: 120 --------VAPSLATSATAAFNPYLGPVSPGLMPAEILPTTPMLVTGNPG----VAVPSA 167
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGA-DCKFHHPKE 179
+A++Q L CR Y G C G +C+F HP E
Sbjct: 168 AAAAAQKLMRTDRLEVCREYQR-GNCNRGENECRFAHPAE 206
>gi|281204195|gb|EFA78391.1| CCCH-type zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 664
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ ++ +C YG CK+ H ++ + ++G C Y YG CK+G
Sbjct: 117 CQVFLKEKSCPYGDSCKYSHDLQKYLSTKQPSLGK-----------CYLYETYGECKYGI 165
Query: 217 TCRF--DH 222
C F DH
Sbjct: 166 KCLFGGDH 173
>gi|1125020|dbj|BAA08532.1| U2AF1-RS1 [Homo sapiens]
Length = 479
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 170 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 215
>gi|449435870|ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
[Cucumis sativus]
gi|449489882|ref|XP_004158448.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
[Cucumis sativus]
Length = 606
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 14/68 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + ++G+C G C FHH + QS + +C ++ G C+ GP
Sbjct: 316 CFKFTSSGSCPRGEKCNFHHDMDAREQSQ--------------RGVCFDFLNKGKCERGP 361
Query: 217 TCRFDHPY 224
C F H +
Sbjct: 362 DCNFKHSF 369
>gi|56118476|ref|NP_001007933.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
(Silurana) tropicalis]
gi|82181478|sp|Q66KE3.1|CPSF4_XENTR RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|51513396|gb|AAH80440.1| cpsf4 protein [Xenopus (Silurana) tropicalis]
Length = 269
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP C+F HP P+
Sbjct: 152 LVGFCIEGPNCKFMHPRFELPM 173
>gi|387015182|gb|AFJ49710.1| Cleavage and polyadenylation specificity factor subunit 4-like
[Crotalus adamanteus]
Length = 268
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKYGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP C+F HP P+
Sbjct: 152 LVGFCPEGPACKFMHPRFELPM 173
>gi|385301347|gb|EIF45541.1| tis11p [Dekkera bruxellensis AWRI1499]
Length = 403
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 22/115 (19%)
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYYMNTGTCK 167
SI+GS+ + S G + + A+ H S+S + R + D C + G C
Sbjct: 268 SISGSSALRS----GSVVSKARSHKASSSHDSF--RSKKKDNQLYKTEMCVQFQRNGYCP 321
Query: 168 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 222
YG+ C+F H ++ + + ++P C N+ G C++G C F H
Sbjct: 322 YGSKCQFAHGEQELKRIKRCE----NWKTKP----CINWMRTGTCRYGKRCCFKH 368
>gi|332223957|ref|XP_003261134.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Nomascus
leucogenys]
Length = 478
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
M +D +CP+Y +TG+C+FG C H P+S T L + + G P +
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 58 LQYA 61
L+Y+
Sbjct: 225 LEYS 228
>gi|157119898|ref|XP_001659561.1| hypothetical protein AaeL_AAEL001527 [Aedes aegypti]
gi|108883145|gb|EAT47370.1| AAEL001527-PA, partial [Aedes aegypti]
Length = 312
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 60/213 (28%)
Query: 23 CKFHHPQPSSLGTALPLTG-------NASLGSMGSS----VLPSSGLQYAGSLPTWSLQR 71
CK+ HP P L L + G NA + MG S VLP G +P +
Sbjct: 15 CKYFHP-PQHLKDQLLINGRNHLALKNAIMQQMGISPGQPVLP-------GQVPAVATN- 65
Query: 72 APYLSSRLQGTQSYMPLIVSPSQGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGD 131
PYL+S T +Y P P ++P +GP P++++
Sbjct: 66 -PYLAS--MPTSTYSPYF--PPGHLMPT--------LLGPADPSAVS------------Q 100
Query: 132 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG-ADCKFHHPKERIAQSAASNIG 190
+G Q ++ A+ Q +P CR +M G CK ++C+F HP++ + ++
Sbjct: 101 VGPVVQQTLVPATQQKIPRSDRLEVCREFMR-GACKRAESECRFAHPQDSVTTHEDGSV- 158
Query: 191 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
+C + ++ G C P CR+ HP
Sbjct: 159 ----------TVCMD-AVKGRCAREP-CRYFHP 179
>gi|402909571|ref|XP_003917490.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Papio anubis]
Length = 480
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
M +D +CP+Y +TG+C+FG C H P+S T L + + G P +
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 58 LQYA 61
L+Y+
Sbjct: 225 LEYS 228
>gi|358420032|ref|XP_003584397.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
gi|359082042|ref|XP_003588252.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
Length = 477
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 168 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 213
>gi|344249745|gb|EGW05849.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Cricetulus griseus]
Length = 138
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
+ +D +CP+Y +TG+C+FG C H P+S T L + + G P S
Sbjct: 27 LEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSS 86
Query: 58 LQYA 61
L+Y+
Sbjct: 87 LEYS 90
>gi|255071919|ref|XP_002499634.1| predicted protein [Micromonas sp. RCC299]
gi|226514896|gb|ACO60892.1| predicted protein [Micromonas sp. RCC299]
Length = 177
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 194 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
LP RPG +C YS G C G C +DHP
Sbjct: 146 LPRRPGSTVCIEYSRLGGCALGAACPYDHP 175
>gi|341903722|gb|EGT59657.1| hypothetical protein CAEBREN_31186 [Caenorhabditis brenneri]
Length = 468
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 214
CR +M+ G C YG C++ H + +P P C ++ G C +
Sbjct: 211 CRSWMDHGRCNYGERCQYAH----------GEVEKRPVPRHPKYKTEACQSFHQSGYCPY 260
Query: 215 GPTCRFDH 222
GP C F H
Sbjct: 261 GPRCHFIH 268
>gi|322708153|gb|EFY99730.1| CCCH zinc finger domain protein [Metarhizium anisopliae ARSEF 23]
Length = 576
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 201 AICSNYSMYGICKFGPTCRFDHPYAG 226
AIC Y G CKFG TCRF+HP AG
Sbjct: 2 AICKFYQQ-GYCKFGNTCRFEHPDAG 26
>gi|294946373|ref|XP_002785044.1| hypothetical protein Pmar_PMAR011353 [Perkinsus marinus ATCC 50983]
gi|239898436|gb|EER16840.1| hypothetical protein Pmar_PMAR011353 [Perkinsus marinus ATCC 50983]
Length = 303
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 101 GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYY 160
G NT G+ GP+ P AG ++ G Q+ I + + P R C+++
Sbjct: 153 GVNTLPGSNGPMGPPVAAGMGMM-----------GQQVSIQAPA----PRRYRTELCKHF 197
Query: 161 MNTGTCKYGADCKFHHPKERIAQSAASNI 189
M G C YG C + H E I Q A N+
Sbjct: 198 ME-GKCGYGEHCSYAHSMEEIRQHVAGNL 225
>gi|395736068|ref|XP_002815836.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pongo abelii]
Length = 489
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 180 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 225
>gi|296234985|ref|XP_002762699.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Callithrix jacchus]
Length = 474
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
M +D +CP+Y +TG+C+FG C H P+S T L + + G P +
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 224
Query: 58 LQYA 61
L+Y+
Sbjct: 225 LEYS 228
>gi|357144905|ref|XP_003573455.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Brachypodium distachyon]
Length = 363
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 20/105 (19%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQ-------------------SAASNIGPLGLPSR 197
C+ + C YG C F H ++ A+ +AA+N + PS
Sbjct: 182 CKKFYTEEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGSYSSPTAAANGPTILKPSN 241
Query: 198 PGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILD 242
IC+ + M G C FG C F H A NYG L + D
Sbjct: 242 WKTRICNKWEMTGYCPFGSKCHFAHGAAELH-NYGGGLVDIDGRD 285
>gi|355757207|gb|EHH60732.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
fascicularis]
Length = 467
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
M +D +CP+Y +TG+C+FG C H P+S T L + + G P +
Sbjct: 152 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 211
Query: 58 LQYA 61
L+Y+
Sbjct: 212 LEYS 215
>gi|391325207|ref|XP_003737130.1| PREDICTED: uncharacterized protein LOC100897859 [Metaseiulus
occidentalis]
Length = 395
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G CKYG C+F H + + L + +C + G+C +G
Sbjct: 59 CRPFEESGVCKYGDKCQFAHGFQELRT--------LTRHPKYKTELCCTFHTTGLCPYGS 110
Query: 217 TCRFDH 222
C F H
Sbjct: 111 RCHFIH 116
>gi|348554507|ref|XP_003463067.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cavia porcellus]
Length = 490
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFG 209
>gi|297303397|ref|XP_001116975.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Macaca mulatta]
Length = 479
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 209
>gi|355691520|gb|EHH26705.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
mulatta]
Length = 472
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 163 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 208
>gi|397512930|ref|XP_003826786.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Pan
paniscus]
Length = 504
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 195 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 240
>gi|449476092|ref|XP_002192710.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Taeniopygia guttata]
Length = 243
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP C+F HP P+
Sbjct: 152 LVGFCPEGPACKFMHPRFELPM 173
>gi|307169924|gb|EFN62433.1| RING finger protein 113A [Camponotus floridanus]
Length = 312
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 20/139 (14%)
Query: 107 GNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTC 166
GN P P S G+ I + + D A A ++ L + D R N
Sbjct: 78 GNALPAGP-SDQGATAILQTETEKDKDAQALFEKAQKINEELEGKEDDKIYRGLNNYA-- 134
Query: 167 KYGADCKFHHPKERIAQSAASNI---GPLGLPSRPGQA--------ICSNYSMYGICKFG 215
+++ K+ A +A+S + GP+ PS IC +Y G C FG
Sbjct: 135 ------QYYKKKDTAAGNASSGMVRKGPIRAPSNLRATVRWDYQPDICKDYKETGFCGFG 188
Query: 216 PTCRFDHPYAGYPINYGLS 234
+C+F H + Y + + L
Sbjct: 189 DSCKFLHDRSDYKLGWQLE 207
>gi|205688456|sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
++QD+ CP++++TG+C+FGV C H P T L
Sbjct: 162 IQQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLL 198
>gi|397467387|ref|XP_003805402.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pan paniscus]
Length = 478
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|348529734|ref|XP_003452368.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like
[Oreochromis niloticus]
Length = 419
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+CKYG C+F H + L + C + G C +GP
Sbjct: 134 CRPFEENGSCKYGEKCQFAHGYHELRS--------LSRHPKYKTEPCRTFHTIGFCPYGP 185
Query: 217 TCRFDH 222
C F H
Sbjct: 186 RCHFIH 191
>gi|341892767|gb|EGT48702.1| CBN-CCCH-1 protein [Caenorhabditis brenneri]
Length = 465
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 214
CR +M+ G C YG C++ H + +P P C ++ G C +
Sbjct: 211 CRSWMDHGRCNYGERCQYAH----------GEVEKRPVPRHPKYKTEACQSFHQSGYCPY 260
Query: 215 GPTCRFDH 222
GP C F H
Sbjct: 261 GPRCHFIH 268
>gi|4827046|ref|NP_005080.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Homo sapiens]
gi|2833266|sp|Q15696.2|U2AFM_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=Renal carcinoma antigen
NY-REN-20; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|1808582|dbj|BAA08533.1| U2AF1-RS2 [Homo sapiens]
gi|109731267|gb|AAI13455.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|109731281|gb|AAI13481.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|119619306|gb|EAW98900.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_a
[Homo sapiens]
gi|313883686|gb|ADR83329.1| zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [synthetic construct]
Length = 482
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|332860347|ref|XP_520951.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Pan
troglodytes]
Length = 478
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|297709488|ref|XP_002831462.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pongo abelii]
Length = 478
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|397512928|ref|XP_003826785.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Pan
paniscus]
gi|397512932|ref|XP_003826787.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 3 [Pan
paniscus]
gi|397512934|ref|XP_003826788.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 4 [Pan
paniscus]
gi|410039576|ref|XP_003950650.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pan troglodytes]
Length = 489
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 180 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 225
>gi|127797587|gb|AAH50451.2| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
Length = 482
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|355758818|gb|EHH61525.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 1 [Macaca
fascicularis]
Length = 472
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
M +D +CP+Y +TG+C+FG C H P+S T L + + G P +
Sbjct: 163 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDAS 222
Query: 58 LQYA 61
L+Y+
Sbjct: 223 LEYS 226
>gi|32566847|ref|NP_505926.2| Protein CCCH-1, isoform a [Caenorhabditis elegans]
gi|24817303|emb|CAA98475.2| Protein CCCH-1, isoform a [Caenorhabditis elegans]
Length = 460
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 55/141 (39%), Gaps = 42/141 (29%)
Query: 114 PTSIAGSNLIYSSRNQGDLGA-----GAQ------MHILSASS-----QNLPER------ 151
PTS AGS+L +S LGA G+Q +++SASS Q P
Sbjct: 131 PTSFAGSSLFGASEFGNPLGAPGTPIGSQHQMSIGQNLVSASSPYSTPQLTPMATPNGQA 190
Query: 152 --PDQPD------CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQA 201
P P CR +M+ G C YG C++ H + +P P
Sbjct: 191 PPPKNPKLYKTELCRSWMDHGRCNYGERCQYAH----------GELEKRPVPRHPKYKTE 240
Query: 202 ICSNYSMYGICKFGPTCRFDH 222
C ++ G C +GP C F H
Sbjct: 241 ACQSFHQSGYCPYGPRCHFIH 261
>gi|257219672|gb|ACV51810.1| ZRSR2Y, partial [Bos taurus]
Length = 445
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 158 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 203
>gi|301106378|ref|XP_002902272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098892|gb|EEY56944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 528
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 35/93 (37%), Gaps = 22/93 (23%)
Query: 153 DQPDCRYYMNTGTCKYGADCKFHH---------------PKERIAQSAASNIGPLGLPSR 197
D P C + G CK GA CKF H E + Q AA +
Sbjct: 282 DAPVCINFQK-GKCKRGAACKFQHLHGNGNDEMSLEENVKMETVRQDAAPE--EEETQAD 338
Query: 198 PGQAICSNYSMYGICKFGPTCRFDH---PYAGY 227
G +C NY G CK G CRF H P GY
Sbjct: 339 EGAPVCENYQK-GKCKRGAACRFRHVAAPAEGY 370
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+C GA C+F H + + A+ + + + Q++C N+ G C G
Sbjct: 397 CRNFQR-GSCMRGASCRFAHTGQAPQAAPATAVEEVSEYQKRFQSVCYNWQSTGSCARGE 455
Query: 217 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHS 256
C F H A +++ + +A+ A S
Sbjct: 456 NCPFQHDGA------------FEEVETKKIKQEAVEAVES 483
>gi|119619307|gb|EAW98901.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_b
[Homo sapiens]
Length = 446
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 162 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 207
>gi|426395275|ref|XP_004063900.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 461
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 152 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 197
>gi|148687045|gb|EDL18992.1| cleavage and polyadenylation specific factor 4, isoform CRA_a [Mus
musculus]
Length = 292
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 118 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 175
Query: 208 MYGICKFGPTCRFDHPYAGYPIN 230
+ G C GP+C+F HP P+
Sbjct: 176 LVGFCPEGPSCKFMHPRFELPMG 198
>gi|443922894|gb|ELU42246.1| zf-CCCH domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 477
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 142 SASSQNLPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 199
S+S ++ P P+ P CRY+ + G C G C H +R + I P G
Sbjct: 242 SSSGRHPPLDPNTPAGVCRYFWSRGVCNRGTSCT--HMHQRPDSQGNNPIFPRG------ 293
Query: 200 QAICSNYSMYGICKFGPTCRFDH 222
+C + G+C G +C+F+H
Sbjct: 294 --VCRTFWTSGLCGRGASCKFEH 314
>gi|401841181|gb|EJT43668.1| CTH1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 325
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G CKYG C+F H + SN ++P C N+S G C +G
Sbjct: 210 CESFTIRGYCKYGNKCQFAHGLNELKFKKKSN----NYRTKP----CINWSKLGYCPYGK 261
Query: 217 TCRFDH 222
C F H
Sbjct: 262 RCCFKH 267
>gi|194227695|ref|XP_001490095.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Equus caballus]
Length = 470
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 163 MEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIRSMFTTFG 208
>gi|335284056|ref|XP_003354505.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Sus scrofa]
Length = 244
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I + GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDARFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|145548375|ref|XP_001459868.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427695|emb|CAK92471.1| unnamed protein product [Paramecium tetraurelia]
Length = 134
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 16/116 (13%)
Query: 132 LGAGAQMHILSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS 187
+ A + ++ S S+Q+ L + C+Y+ C YG C F H +E++
Sbjct: 1 MYADCEDYLSSTSTQDDYGTLNVKLKTEFCKYWTEGKICPYGNKCYFAHGEEQLLSK--- 57
Query: 188 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY---PINYGLSLPPLSI 240
+P C N+ + CK+G C+F H Y + Y S+ + +
Sbjct: 58 -----DVPKNYRTKECKNFQEF-FCKYGQRCQFSHMLTKYQMPQLKYWTSVEKIEV 107
>gi|332860349|ref|XP_003317416.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Pan
troglodytes]
Length = 482
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|395837998|ref|XP_003791914.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Otolemur garnettii]
Length = 493
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 209
>gi|413917332|gb|AFW57264.1| hypothetical protein ZEAMMB73_056446 [Zea mays]
Length = 363
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 17/83 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHH-----PKERIAQSAASNIGPLGL------------PSRPG 199
C+ + C YG C F H +E +A S + +G G PS
Sbjct: 180 CKKFYTEEGCPYGDTCTFLHDEQSKARESVAISLSPTVGGGGYNAASANGVMVQKPSNWK 239
Query: 200 QAICSNYSMYGICKFGPTCRFDH 222
IC+ + M G C FG C F H
Sbjct: 240 TRICNKWEMTGYCPFGSKCHFAH 262
>gi|332223959|ref|XP_003261135.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Nomascus
leucogenys]
Length = 482
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 165 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|115491013|ref|XP_001210134.1| predicted protein [Aspergillus terreus NIH2624]
gi|114196994|gb|EAU38694.1| predicted protein [Aspergillus terreus NIH2624]
Length = 561
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 157 CRYYMNTGTCKYGADCKFHHPK-ER-IAQSAASNIGPLGL 194
CR+++ TG C G +CKF H K ER + Q AA G GL
Sbjct: 467 CRHFLRTGRCLRGDNCKFLHEKPERPVKQKAAEKPGRKGL 506
>gi|380805529|gb|AFE74640.1| tristetraprolin, partial [Macaca mulatta]
Length = 215
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 24 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 75
Query: 217 TCRFDH 222
C F H
Sbjct: 76 RCHFIH 81
>gi|402872263|ref|XP_003900043.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Papio
anubis]
Length = 500
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 191 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 236
>gi|402872265|ref|XP_003900044.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Papio
anubis]
Length = 485
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 176 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 221
>gi|405120032|gb|AFR94803.1| hypothetical protein CNAG_01342 [Cryptococcus neoformans var.
grubii H99]
Length = 577
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQS 184
CR Y+N G C+YG CKF+HP R AQS
Sbjct: 7 CRNYLN-GNCRYGNSCKFYHPP-RTAQS 32
>gi|443898685|dbj|GAC76019.1| predicted E3 ubiquitin ligase [Pseudozyma antarctica T-34]
Length = 1301
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 23/116 (19%)
Query: 116 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 175
+ AG++ + ++ G A A++ S E Q C+++ + G C GA C F
Sbjct: 638 TAAGTDELVDDKDSGSALANAKL------SSKKKEALGQVPCKFFRSNG-CSAGASCPFA 690
Query: 176 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 231
H LP GQ + + G C+FG C H G P++
Sbjct: 691 HT----------------LPGDGGQKSVCQWFLKGNCRFGHKCALAHVLPGQPMSM 730
>gi|395514830|ref|XP_003761615.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Sarcophilus harrisii]
Length = 244
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|365761482|gb|EHN03133.1| Cth1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 324
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G CKYG C+F H + SN ++P C N+S G C +G
Sbjct: 209 CESFTIRGYCKYGNKCQFAHGLNELKFKKKSN----NYRTKP----CINWSKLGYCPYGK 260
Query: 217 TCRFDH 222
C F H
Sbjct: 261 RCCFKH 266
>gi|332867112|ref|XP_001137776.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 6 [Pan troglodytes]
gi|397489492|ref|XP_003815760.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Pan paniscus]
gi|410214166|gb|JAA04302.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249440|gb|JAA12687.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289412|gb|JAA23306.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353007|gb|JAA43107.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 244
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|308478904|ref|XP_003101662.1| CRE-CCCH-1 protein [Caenorhabditis remanei]
gi|308262873|gb|EFP06826.1| CRE-CCCH-1 protein [Caenorhabditis remanei]
Length = 482
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 214
CR +M+ G C YG C++ H + +P P C ++ G C +
Sbjct: 213 CRSWMDHGRCNYGERCQYAH----------GEVEKRPVPRHPKYKTEACQSFHQSGYCPY 262
Query: 215 GPTCRFDH 222
GP C F H
Sbjct: 263 GPRCHFIH 270
>gi|149755352|ref|XP_001494983.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Equus caballus]
gi|301777648|ref|XP_002924238.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Ailuropoda melanoleuca]
gi|348568556|ref|XP_003470064.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Cavia porcellus]
gi|354495217|ref|XP_003509727.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Cricetulus griseus]
gi|410984389|ref|XP_003998511.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Felis catus]
gi|183229548|gb|ACC60272.1| cleavage and polyadenylation specific factor 4 isoform 2 [Mus
musculus]
Length = 244
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|334328570|ref|XP_001368672.2| PREDICTED: tristetraprolin-like [Monodelphis domestica]
Length = 400
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 12/75 (16%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YG+ C+F H + P + +C + G C +G
Sbjct: 164 CRTFSESGKCRYGSKCQFAH--------GPGELRPASRHPKYKTELCRKLLILGSCPYGS 215
Query: 217 TCRFDHPYAGYPINY 231
C F H YP ++
Sbjct: 216 RCHFIH----YPSDF 226
>gi|291411293|ref|XP_002721910.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Oryctolagus cuniculus]
Length = 244
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|170105044|ref|XP_001883735.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641370|gb|EDR05631.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 629
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+YY + C G CKF H +E N+ PL P QA Y +G CK G
Sbjct: 15 CKYYNSPRGCFSGDSCKFLHGEE-----PGQNVQPLLTPY--DQAKQCRYYQHGFCKRGE 67
Query: 217 TCRFDH 222
C F H
Sbjct: 68 LCWFKH 73
>gi|164657462|ref|XP_001729857.1| hypothetical protein MGL_2843 [Malassezia globosa CBS 7966]
gi|159103751|gb|EDP42643.1| hypothetical protein MGL_2843 [Malassezia globosa CBS 7966]
Length = 500
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 16/105 (15%)
Query: 146 QNLPERPDQPD-CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI-- 202
Q ER P C YY TGTC+ G C F H +R A + P G PG +
Sbjct: 226 QRALERAKTPQLCTYYTRTGTCRRGTQCPFIHDDQRKALCPGV-LKPSGCVLPPGTCLLS 284
Query: 203 ----------CSNYSMYGICKFGPTCRFDHPYAGY--PINYGLSL 235
C ++ C+ G C F H + P+ +L
Sbjct: 285 HTRCPQNVPHCVHFLRLHSCRNGDACAFTHAQVAHDAPVCRAFAL 329
>gi|125987603|ref|NP_001075028.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Homo sapiens]
gi|383872422|ref|NP_001244547.1| cleavage and polyadenylation specificity factor subunit 4 [Macaca
mulatta]
gi|332258048|ref|XP_003278115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Nomascus leucogenys]
gi|402862922|ref|XP_003895787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Papio anubis]
gi|403285963|ref|XP_003934278.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Saimiri boliviensis boliviensis]
gi|426357074|ref|XP_004045873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Gorilla gorilla gorilla]
gi|13111867|gb|AAH03101.1| Cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597070|gb|EAW76664.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_c [Homo sapiens]
gi|380809014|gb|AFE76382.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|383413435|gb|AFH29931.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|384940112|gb|AFI33661.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
Length = 244
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|426257963|ref|XP_004023719.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2-like
[Ovis aries]
Length = 502
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 193 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 238
>gi|351712194|gb|EHB15113.1| tRNA-dihydrouridine synthase 3-like protein [Heterocephalus glaber]
Length = 645
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 20/95 (21%)
Query: 164 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 223
G C +G C+F H R +S ++GP C + +G C +G TCRF
Sbjct: 128 GQCFFGDRCRFLHDVGRYLESKPPDLGPH----------CVLFETFGRCPYGVTCRFAGA 177
Query: 224 YAG---------YPINYGLSLPPL-SILDSSLMNH 248
+ G + YG PPL + LD +L
Sbjct: 178 HLGPEGQNLVREELLAYGAHPPPLRNGLDKALQQQ 212
>gi|344289702|ref|XP_003416580.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Loxodonta africana]
Length = 244
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|332221469|ref|XP_003259883.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 5 [Nomascus
leucogenys]
Length = 507
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 195 MEKDRANCPFYSKTGACRFGHRCSRKHNFPTSSPTLLIKSMFTTFG 240
>gi|29792109|gb|AAH50738.1| CPSF4 protein [Homo sapiens]
gi|119597071|gb|EAW76665.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_d [Homo sapiens]
gi|312153176|gb|ADQ33100.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
Length = 243
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|417397723|gb|JAA45895.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 243
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|212723490|ref|NP_001131826.1| uncharacterized protein LOC100193200 [Zea mays]
gi|194692650|gb|ACF80409.1| unknown [Zea mays]
gi|195628590|gb|ACG36125.1| zinc finger C-x8-C-x5-C-x3-H type family protein [Zea mays]
gi|224031423|gb|ACN34787.1| unknown [Zea mays]
gi|407232606|gb|AFT82645.1| C3H31 transcription factor, partial [Zea mays subsp. mays]
gi|413917333|gb|AFW57265.1| putative Zinc finger C-x8-C-x5-C-x3-H type family protein [Zea
mays]
gi|413917334|gb|AFW57266.1| putative Zinc finger C-x8-C-x5-C-x3-H type family protein [Zea
mays]
Length = 359
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 17/83 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHH-----PKERIAQSAASNIGPLGL------------PSRPG 199
C+ + C YG C F H +E +A S + +G G PS
Sbjct: 180 CKKFYTEEGCPYGDTCTFLHDEQSKARESVAISLSPTVGGGGYNAASANGVMVQKPSNWK 239
Query: 200 QAICSNYSMYGICKFGPTCRFDH 222
IC+ + M G C FG C F H
Sbjct: 240 TRICNKWEMTGYCPFGSKCHFAH 262
>gi|27806837|ref|NP_776367.1| cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
gi|75057446|sp|O19137.1|CPSF4_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|2327052|gb|AAC48759.1| cleavage and polyadenylation specificity factor 30 kDa subunit [Bos
taurus]
gi|296472897|tpg|DAA15012.1| TPA: cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
Length = 243
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|395852820|ref|XP_003798928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Otolemur garnettii]
Length = 244
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|441598673|ref|XP_004087475.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
gi|441598677|ref|XP_004087476.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
Length = 492
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 180 MEKDRANCPFYSKTGACRFGHRCSRKHNFPTSSPTLLIKSMFTTFG 225
>gi|313235823|emb|CBY19807.1| unnamed protein product [Oikopleura dioica]
Length = 454
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR ++ GTC YG C F H + ++ + + +C ++ GIC +G
Sbjct: 307 CRTFIERGTCPYGDKCDFAHGTKDLSYDITKH-------PKYRTKLCRSFQDTGICVYGD 359
Query: 217 TCRFDH 222
C F H
Sbjct: 360 RCCFSH 365
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G C YG C F H K+ Q+ S +PS +C + G C +G
Sbjct: 267 CITFHTLGFCPYGVRCNFVHDKDEHRQAKHS------VPSLYKTRLCRTFIERGTCPYGD 320
Query: 217 TCRFDH 222
C F H
Sbjct: 321 KCDFAH 326
>gi|426249713|ref|XP_004018594.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2 [Ovis
aries]
Length = 416
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGCCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGARCRYDH 55
>gi|73957938|ref|XP_860761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Canis lupus familiaris]
Length = 244
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|343958430|dbj|BAK63070.1| signal recognition particle 19kDa [Pan troglodytes]
Length = 310
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 1 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 46
>gi|59891425|ref|NP_001012351.1| cleavage and polyadenylation specificity factor subunit 4 [Rattus
norvegicus]
gi|81882852|sp|Q5FVR7.1|CPSF4_RAT RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|58476448|gb|AAH89824.1| Cleavage and polyadenylation specific factor 4 [Rattus norvegicus]
gi|183229546|gb|ACC60271.1| cleavage and polyadenylation specific factor 4 isoform 1 [Mus
musculus]
Length = 243
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|313222163|emb|CBY39153.1| unnamed protein product [Oikopleura dioica]
Length = 454
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR ++ GTC YG C F H + ++ + + +C ++ GIC +G
Sbjct: 307 CRTFIERGTCPYGDKCDFAHGTKDLSYDITKH-------PKYRTKLCRSFQDTGICVYGD 359
Query: 217 TCRFDH 222
C F H
Sbjct: 360 RCCFSH 365
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G C YG C F H K+ Q+ S +PS +C + G C +G
Sbjct: 267 CITFHTLGFCPYGVRCNFVHDKDEHRQAKHS------VPSLYKTRLCRTFIERGTCPYGD 320
Query: 217 TCRFDH 222
C F H
Sbjct: 321 KCDFAH 326
>gi|291407124|ref|XP_002719965.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2
[Oryctolagus cuniculus]
Length = 498
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
M +D +CP+Y +TG+C+FG C H P+S T L + + G P +
Sbjct: 168 MEKDRANCPFYNKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDAS 227
Query: 58 LQYA 61
L+Y+
Sbjct: 228 LEYS 231
>gi|268557114|ref|XP_002636546.1| Hypothetical protein CBG23235 [Caenorhabditis briggsae]
Length = 340
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 214
CR +M+ G C YG C++ H + +P P C ++ G C +
Sbjct: 152 CRSWMDHGRCNYGERCQYAH----------GEVEKRPVPRHPKYKTEACQSFHQSGYCPY 201
Query: 215 GPTCRFDH 222
GP C F H
Sbjct: 202 GPRCHFIH 209
>gi|395738149|ref|XP_003780757.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 4 [Pongo abelii]
Length = 171
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 41 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 98
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 99 LVGFCPEGPSCKFMHPRFELPM 120
>gi|213514644|ref|NP_001133741.1| Butyrate response factor 2 [Salmo salar]
gi|209155172|gb|ACI33818.1| Butyrate response factor 2 [Salmo salar]
Length = 411
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G CKYG C+F H + L + C + G C +GP
Sbjct: 135 CRPFEENGACKYGEKCQFAHGYHELRN--------LSRHPKYKTEPCRTFHTIGFCPYGP 186
Query: 217 TCRFDH 222
C F H
Sbjct: 187 RCHFIH 192
>gi|398390261|ref|XP_003848591.1| hypothetical protein MYCGRDRAFT_111278 [Zymoseptoria tritici
IPO323]
gi|339468466|gb|EGP83567.1| hypothetical protein MYCGRDRAFT_111278 [Zymoseptoria tritici
IPO323]
Length = 550
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASN-IGPLGLPS------RPG 199
C++++ G C++G DCKF HP + QS+ N PL P+ RPG
Sbjct: 11 CKFFLE-GRCRFGNDCKFEHPSNQAPQSSNQNRFAPLQNPANANQRGRPG 59
>gi|410978386|ref|XP_003995574.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Felis catus]
Length = 468
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H PSS T L + + G
Sbjct: 165 MEKDRANCPFYGKTGACRFGDRCLRKHNFPSSSPTLLIKSMFTTFG 210
>gi|403345758|gb|EJY72260.1| CCCH-type Zn-finger protein [Oxytricha trifallax]
Length = 296
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 14/88 (15%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQS-----AASNIGPLGLP-SRPGQAICSNYSMY- 209
C+++M T C GA C F H + + ++ + + +P + C + +
Sbjct: 62 CKHFMQTKHCHVGAKCHFAHGEHELRKADDALPIEQTMKMMNIPYNNYKTQTCKYFELSG 121
Query: 210 GICKFGPTCRFDH-------PYAGYPIN 230
G CKFG C F H PY P+N
Sbjct: 122 GNCKFGKNCSFAHGGFELRNPYDAVPLN 149
>gi|402074044|gb|EJT69596.1| hypothetical protein GGTG_13212 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 930
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 10/64 (15%)
Query: 159 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 218
+Y G C +G C+F H ++R+ + A LP P +C Y G C G C
Sbjct: 45 HYFAAGHCAHGNSCRFAHSRDRVVAAEA-------LP--PKTEVC-RYFAAGRCTKGEEC 94
Query: 219 RFDH 222
RF H
Sbjct: 95 RFAH 98
>gi|348673356|gb|EGZ13175.1| hypothetical protein PHYSODRAFT_316572 [Phytophthora sojae]
Length = 634
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR ++ G C+YG CK++HP A + P + + P +C ++S G C G
Sbjct: 88 CRGFI-AGICRYGDLCKYYHP-------AGPVVVPPEIQAIPSSRLCRHFS-RGSCAQGS 138
Query: 217 TCRFDH 222
C+F H
Sbjct: 139 ECKFAH 144
>gi|169790769|ref|NP_001116070.1| probable E3 ubiquitin-protein ligase makorin-2 [Xenopus laevis]
gi|150416784|gb|ABR68861.1| makorin-2 [Xenopus laevis]
Length = 408
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 21/86 (24%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
P Q CRY+++ G C+ G+ C F H +A S S + + + G
Sbjct: 3 PKQVTCRYFLH-GVCREGSRCLFSHD---LATSKPSTV--------------CRFFLRGQ 44
Query: 212 CKFGPTCRFDHPYAGYPINYGLSLPP 237
C +G CR+DH P N + +PP
Sbjct: 45 CAYGTRCRYDHV---KPCNGTVFIPP 67
>gi|432107120|gb|ELK32543.1| Zinc finger protein 36, C3H1 type-like 1 [Myotis davidii]
Length = 155
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 15/83 (18%)
Query: 140 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 199
L+ +++ L +RP + G CKYG C+F H + L +
Sbjct: 17 FLAENTEGLKKRP-------FEENGACKYGDKCQFAH--------GIHELRSLTRHPKYK 61
Query: 200 QAICSNYSMYGICKFGPTCRFDH 222
+C + G C +GP C F H
Sbjct: 62 TELCRTFHTIGFCPYGPRCHFIH 84
>gi|31615566|pdb|1M9O|A Chain A, Nmr Structure Of The First Zinc Binding Domain Of
Nup475TTPTIS11
Length = 77
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR Y +G C+YGA C+F H + + +N P + +C + + G C +G
Sbjct: 15 CRTYSESGRCRYGAKCQFAHG---LGELRQANRHP-----KYKTELCHKFKLQGRCPYGS 66
Query: 217 TCRFDH 222
C F H
Sbjct: 67 RCHFIH 72
>gi|71402546|ref|XP_804175.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70867005|gb|EAN82324.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 276
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
+ ++ K+C + G+CKFG C +HH PS A P AS+G
Sbjct: 116 VERNRKTCKQFWENGACKFGSRCLYHHLAPSQGHLADPSVTKASVG 161
>gi|395847233|ref|XP_003796285.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2 isoform 1
[Otolemur garnettii]
Length = 416
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGYCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGTRCRYDH 55
>gi|335305731|ref|XP_001926829.3| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Sus
scrofa]
Length = 485
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 172 MEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFG 217
>gi|902735|emb|CAA60414.1| Lee1p [Saccharomyces cerevisiae]
Length = 301
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 80 QGTQSYMPLIVSPSQGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 138
+ +QS ++ S Q P +N N+ LS G+ L +SSR Q + +
Sbjct: 19 RNSQSANEMLASQIQDFQNIPRSFNDSNANVN-LSKNCTVGNQLPFSSRQQKIIME--HL 75
Query: 139 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
I +SQ + P C+++ G C+ G+ C F H + I S+A+N LP +
Sbjct: 76 LITKNNSQQQKDYSHVP-CKFFK-MGNCQAGSSCPFSHSPDII--SSANN-----LPCK- 125
Query: 199 GQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYGLSLPPLSILDSSLMNH--QAISATH 255
Y G CKFG C H G+ +N S P+ I S N+ A SA+
Sbjct: 126 -------YFAKGNCKFGNKCVNAHVLPNGFKMN---SKEPIDITPPSQNNYLSHARSASF 175
Query: 256 SIETSP--DASSKIPNWVQNSDAVSVQH 281
S TSP A ++ + N++ S Q+
Sbjct: 176 STYTSPPLSAQTEFSHSASNANFFSSQY 203
>gi|218190979|gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indica Group]
Length = 731
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
QD+ CP++++TG+C+FGV C H P T L
Sbjct: 217 QDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLL 251
>gi|125560223|gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indica Group]
Length = 367
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 34/146 (23%)
Query: 157 CRYYMNTGTCKYGADCKFHH-----PKERIAQSAASNI---------------------- 189
C+ + C YG C F H +E +A S + ++
Sbjct: 175 CKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGSYNSAAAAAASASAA 234
Query: 190 ---GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLM 246
GP+ PS IC+ + M G C FG C F H A YG L + D++
Sbjct: 235 AGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELH-KYGGGLVDIDSRDAAAT 293
Query: 247 ---NHQAISATHSIETSPDASSKIPN 269
+SA ET+ +++ +P+
Sbjct: 294 PDSKQAVVSAKAPAETTAASTTVLPH 319
>gi|255080914|ref|XP_002504023.1| predicted protein [Micromonas sp. RCC299]
gi|226519290|gb|ACO65281.1| predicted protein [Micromonas sp. RCC299]
Length = 227
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 19/66 (28%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+YYM+ G C GA C+F H + P +C+ Y + G C +G
Sbjct: 6 CKYYMH-GACNKGAACRFSHDIQA-----------------PKSTVCT-YYLAGNCSYGD 46
Query: 217 TCRFDH 222
CR+DH
Sbjct: 47 KCRYDH 52
>gi|221272069|sp|B0F0H3.2|MKRN2_XENLA RecName: Full=Probable E3 ubiquitin-protein ligase makorin-2
Length = 409
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 21/89 (23%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 211
P Q CRY+++ G C+ G+ C F H +A S S + + + G
Sbjct: 3 PKQVTCRYFLH-GVCREGSRCLFSHD---LATSKPSTV--------------CRFFLRGQ 44
Query: 212 CKFGPTCRFDHPYAGYPINYGLSLPPLSI 240
C +G CR+DH P N + +PP +
Sbjct: 45 CAYGTRCRYDHV---KPCNGTVFIPPQEM 70
>gi|353242469|emb|CCA74111.1| hypothetical protein PIIN_08065 [Piriformospora indica DSM 11827]
Length = 547
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +C+YG C+F H S+I + + IC + + G C +G
Sbjct: 389 CRNWEEKQSCRYGVKCQFAH--------GPSDIRTVPRHPKYKTEICRTFWVTGNCPYGK 440
Query: 217 TCRFDHP 223
C F HP
Sbjct: 441 RCCFIHP 447
>gi|350014484|dbj|GAA37204.1| zinc finger protein 36 C3H1 type-like 1 [Clonorchis sinensis]
Length = 383
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 157 CRYY-MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
CR++ MN G C G C F H E + P P + +C N++ G+C FG
Sbjct: 268 CRHFDMNGGLCPAGDKCHFAHGPEELR-------NPQSHPKYRTK-LCRNFAESGVCSFG 319
Query: 216 PTCRFDH 222
C F H
Sbjct: 320 DNCFFLH 326
>gi|344288699|ref|XP_003416084.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Loxodonta africana]
Length = 532
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
M +D CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 214 MEKDRAYCPFYSKTGACRFGDRCSRKHSFPTSSPTLLIKSMFTTFG 259
>gi|322692568|gb|EFY84469.1| CCCH zinc finger domain protein [Metarhizium acridum CQMa 102]
Length = 576
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 201 AICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNH-----QAISATH 255
AIC Y G CKFG +CRF+HP AG N + L S Q A +
Sbjct: 2 AICKFYQQ-GNCKFGNSCRFEHPDAGNDRNQSQNR--FGTLASGAGGGSSGGLQDALAKY 58
Query: 256 SIETS---PDASSKIPNWV 271
SI T D +S++P W+
Sbjct: 59 SIATDTMVKDLTSEVPQWI 77
>gi|222623064|gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
QD+ CP++++TG+C+FGV C H P T L
Sbjct: 121 QDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLL 155
>gi|407851923|gb|EKG05616.1| hypothetical protein TCSYLVIO_003308 [Trypanosoma cruzi]
Length = 367
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 46
+ + K+C + +G+CKFG C +HH PS A P AS+G
Sbjct: 207 VERSRKTCKQFWESGACKFGSRCLYHHLSPSQGHLADPSVTKASVG 252
>gi|358335246|dbj|GAA31229.2| zinc finger CCCH domain-containing protein 6 [Clonorchis sinensis]
Length = 622
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
Query: 152 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP-------GQAICS 204
P Q CRY+M G C G C F H + + +G+ S+ + C
Sbjct: 69 PMQAKCRYFME-GRCNKGDSCPFAHDFQPTKKQELCKFYAVGVCSKGPTCLYLHEEVPCK 127
Query: 205 NYSMYGICKFGPTCRFDH 222
Y +G C G +C+F H
Sbjct: 128 FYHFFGKCSHGDSCKFSH 145
>gi|442762051|gb|JAA73184.1| Hypothetical protein, partial [Ixodes ricinus]
Length = 175
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 157 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSRPGQAICSN 205
CR+Y TG C++G C+F H P+ + A +G L +P Q SN
Sbjct: 24 CRFYERTGYCRFGRSCRFVHLPRSKTKN--ARRVGKTALNCQPNQVADSN 71
>gi|431922347|gb|ELK19438.1| tRNA-dihydrouridine synthase 3-like protein [Pteropus alecto]
Length = 439
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 10/61 (16%)
Query: 166 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 225
C +G C+F H R ++ +++GP C + YG C +G TCRF +
Sbjct: 135 CFFGDRCRFLHDVGRYLETKPADLGP----------CCVLFETYGRCPYGVTCRFAGAHL 184
Query: 226 G 226
G
Sbjct: 185 G 185
>gi|149034886|gb|EDL89606.1| rCG42591, isoform CRA_a [Rattus norvegicus]
Length = 199
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 62 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 119
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 120 LVGFCPEGPSCKFMHPRFELPM 141
>gi|354498940|ref|XP_003511570.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cricetulus griseus]
Length = 537
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
+ +D +CP+Y +TG+C+FG C H P+S T L + + G P S
Sbjct: 213 LEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSS 272
Query: 58 LQYA 61
L+Y+
Sbjct: 273 LEYS 276
>gi|351712308|gb|EHB15227.1| Muscleblind-like protein 1, partial [Heterocephalus glaber]
Length = 329
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 80/206 (38%), Gaps = 34/206 (16%)
Query: 23 CKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSL-PTWSLQRAPYLSSRLQG 81
CK+ HP P L T L + G +L + + + +Q A ++ P LQ P S
Sbjct: 8 CKYLHP-PPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFS----- 61
Query: 82 TQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSPTSIAGSNLIYSSRNQGDLGAGAQMHI 140
V+PS + +N Y+G + P L P I + + + N G A
Sbjct: 62 --------VAPSLATNASAAFNPYLGPVSPSLVPAEILPTTPMLVTGNPGVPVPAAA--- 110
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGA-DCKFHHPKERIAQSAASNIGPLGLPSRPG 199
+A++Q L CR Y G C G DC+F HP + N
Sbjct: 111 -AAAAQKLMRTDRLEVCREYQR-GNCNRGENDCRFAHPADSTMIDTNDNTV--------- 159
Query: 200 QAICSNYSMYGICKFGPTCRFDHPYA 225
+C +Y + G C C++ HP A
Sbjct: 160 -TVCMDY-IKGRCS-REKCKYFHPPA 182
>gi|90075930|dbj|BAE87645.1| unnamed protein product [Macaca fascicularis]
Length = 280
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGYCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGTRCRYDH 55
>gi|34784575|gb|AAH57067.1| Cpsf4 protein [Mus musculus]
Length = 159
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNY 206
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 40 MPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY 98
Query: 207 SMYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 99 -LVGFCPEGPSCKFMHPRFELPM 120
>gi|393247657|gb|EJD55164.1| hypothetical protein AURDEDRAFT_78116 [Auricularia delicata
TFB-10046 SS5]
Length = 308
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMY 209
P+C +Y G C G +C + HPKER + N +GP+ + C Y +
Sbjct: 126 PECWWYAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPICPRKHVRRVACPQY-LA 184
Query: 210 GICKFGPTCRFDH 222
G C GP C H
Sbjct: 185 GFCPAGPDCPRGH 197
>gi|357142577|ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Brachypodium distachyon]
Length = 748
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 3 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 37
QD+ CP+Y++T +C+FGV C H P T L
Sbjct: 207 QDKAHCPFYLKTAACRFGVRCSRVHFYPDKSCTLL 241
>gi|293350806|ref|XP_001067753.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
gi|293362880|ref|XP_217612.5| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Rattus norvegicus]
Length = 541
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 1 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG---SMGSSVLPSSG 57
+ +D +CP+Y +TG+C+FG C H P+S T L + + G P S
Sbjct: 165 LEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFGMEQCRRDDYDPDSS 224
Query: 58 LQYA 61
L+Y+
Sbjct: 225 LEYS 228
>gi|403371081|gb|EJY85417.1| CCCH-type Zn-finger protein [Oxytricha trifallax]
Length = 536
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + GTCK+G C F H + + + +PS+ +C Y C +G
Sbjct: 205 CRNWELHGTCKFGDTCAFAHGDFELQKKS-------HVPSKYKTKLCKQYHENLYCPYGQ 257
Query: 217 TCRFDHPYAGY 227
C+F H +
Sbjct: 258 RCQFAHSQRSF 268
>gi|332243383|ref|XP_003270859.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Nomascus
leucogenys]
Length = 482
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSH----------------DLSDSPCSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|426357078|ref|XP_004045875.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Gorilla gorilla gorilla]
gi|221043738|dbj|BAH13546.1| unnamed protein product [Homo sapiens]
Length = 191
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 41 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 98
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 99 LVGFCPEGPSCKFMHPRFELPM 120
>gi|401880835|gb|EJT45146.1| hypothetical protein A1Q1_06463 [Trichosporon asahii var. asahii
CBS 2479]
Length = 507
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSSLGTALP 38
C ++ RTG C+ G C+F H +P S + P
Sbjct: 346 CKFFARTGKCRHGAKCRFEHTRPESATSTAP 376
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
+P C+++ TG C++GA C+F H + A S A
Sbjct: 343 RPVCKFFARTGKCRHGAKCRFEHTRPESATSTA 375
>gi|6325203|ref|NP_015271.1| Lee1p [Saccharomyces cerevisiae S288c]
gi|51701649|sp|Q02799.1|LEE1_YEAST RecName: Full=Zinc finger protein LEE1
gi|1079688|gb|AAB68311.1| Lee1p [Saccharomyces cerevisiae]
gi|51013597|gb|AAT93092.1| YPL054W [Saccharomyces cerevisiae]
gi|190407896|gb|EDV11161.1| zinc finger protein LEE1 [Saccharomyces cerevisiae RM11-1a]
gi|207340508|gb|EDZ68838.1| YPL054Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285815484|tpg|DAA11376.1| TPA: Lee1p [Saccharomyces cerevisiae S288c]
gi|392295955|gb|EIW07058.1| Lee1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 301
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 80 QGTQSYMPLIVSPSQGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 138
+ +QS ++ S Q P +N N+ LS G+ L +SSR Q + +
Sbjct: 19 RNSQSANEMLASQIQDFQNIPRSFNDSNANVN-LSKNCTVGNQLPFSSRQQKIIME--HL 75
Query: 139 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
I +SQ + P C+++ G C+ G+ C F H + I S+A+N LP +
Sbjct: 76 LITKNNSQQQKDYSHVP-CKFFK-MGNCQAGSSCPFSHSPDII--SSANN-----LPCK- 125
Query: 199 GQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYGLSLPPLSILDSSLMNH--QAISATH 255
Y G CKFG C H G+ +N S P+ I S N+ A SA+
Sbjct: 126 -------YFAKGNCKFGNKCVNAHVLPNGFKMN---SKEPIDITPPSQNNYLSHARSASF 175
Query: 256 SIETSP--DASSKIPNWVQNSDAVSVQH 281
S TSP A ++ + N++ S Q+
Sbjct: 176 STYTSPPLSAQTEFSHSASNANYFSSQY 203
>gi|323331246|gb|EGA72664.1| Lee1p [Saccharomyces cerevisiae AWRI796]
Length = 301
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 29/208 (13%)
Query: 80 QGTQSYMPLIVSPSQGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQM 138
+ +QS ++ S Q P +N N+ LS G+ L +SSR Q + +
Sbjct: 19 RNSQSANEMLASQIQDFQNIPRSFNDSNANVN-LSKNCTVGNQLPFSSRQQKIIME--HL 75
Query: 139 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 198
I +SQ + P C+++ G C+ G+ C F H + I S+A+N LP +
Sbjct: 76 LITKNNSQQQKDYSHVP-CKFFK-MGNCQAGSSCPFSHSPDII--SSANN-----LPCK- 125
Query: 199 GQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYGLSLPPLSILDSSLMNH--QAISATH 255
Y G CKFG C H G+ +N S P+ I S N+ A SA+
Sbjct: 126 -------YFAKGNCKFGNKCVNAHVLPNGFKMN---SKEPIDITPPSQNNYLSHARSASF 175
Query: 256 SIETSP--DASSKIPNWVQNSDAVSVQH 281
S TSP A ++ + N++ S Q+
Sbjct: 176 STYTSPPLSAQTEFSHSASNANYFSSQY 203
>gi|332231724|ref|XP_003265044.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2 isoform 1
[Nomascus leucogenys]
Length = 415
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGYCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGTRCRYDH 55
>gi|156033111|ref|XP_001585392.1| hypothetical protein SS1G_13631 [Sclerotinia sclerotiorum 1980]
gi|154699034|gb|EDN98772.1| hypothetical protein SS1G_13631 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 829
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 11/69 (15%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ ++ TC +GA C++ HP A+ P ++ C N+ CKFG
Sbjct: 31 CKNFVLHNTCTWGARCRYAHPTPVAAEDP-----------DPSRSSCKNFLSRRGCKFGS 79
Query: 217 TCRFDHPYA 225
C HP A
Sbjct: 80 KCLNYHPGA 88
>gi|71022525|ref|XP_761492.1| hypothetical protein UM05345.1 [Ustilago maydis 521]
gi|46101361|gb|EAK86594.1| hypothetical protein UM05345.1 [Ustilago maydis 521]
Length = 673
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 15/70 (21%)
Query: 155 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 214
P C +Y+ + C+ GADC + H + +N IC ++S YG C
Sbjct: 399 PHCVHYLRSRNCRNGADCLYTHAD--LKDGVKTN-------------ICRDFSDYGWCGR 443
Query: 215 GPTCRFDHPY 224
G C H Y
Sbjct: 444 GKDCEQRHTY 453
>gi|412992223|emb|CCO19936.1| PREDICTED: similar to predicted protein [Bathycoccus prasinos]
Length = 823
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Query: 160 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCR 219
+ GTC G CKF H A+ A + +P C ++ G CK+G TC+
Sbjct: 767 FFAKGTCNKGNACKFSHHASSAAEGAGEVVDTSNVP-------CVFFAK-GKCKYGETCK 818
Query: 220 FDH 222
F H
Sbjct: 819 FSH 821
>gi|410218040|gb|JAA06239.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410264696|gb|JAA20314.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410304626|gb|JAA30913.1| makorin ring finger protein 1 [Pan troglodytes]
Length = 482
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|332867116|ref|XP_001137528.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 4 [Pan troglodytes]
gi|397489496|ref|XP_003815762.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Pan paniscus]
Length = 191
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 41 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 98
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 99 LVGFCPEGPSCKFMHPRFELPM 120
>gi|320165321|gb|EFW42220.1| zinc finger protein [Capsaspora owczarzaki ATCC 30864]
Length = 184
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 23/77 (29%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
+ DC +Y G C++GA CK H K + IC+NY + G C
Sbjct: 122 KKDCPWYAR-GFCRHGAQCKLRHRK---------------------RVICTNY-LTGFCP 158
Query: 214 FGPTCRFDHPYAGYPIN 230
GPTC+F HP P+
Sbjct: 159 DGPTCQFAHPSWDIPMR 175
>gi|193788572|ref|NP_001123332.1| zinc finger protein ZF(C3H/RING)-1 [Ciona intestinalis]
gi|93003020|tpd|FAA00093.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 447
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 24/87 (27%)
Query: 141 LSASSQNLPERPDQP-----DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 195
+++S QN P QP CRY+++ G CK+G++C + H + A +N+
Sbjct: 31 MASSGQNTPCHNSQPWTKKVLCRYFLH-GACKFGSECSYSHDTK-----AQANM------ 78
Query: 196 SRPGQAICSNYSMYGICKFGPTCRFDH 222
+C Y G C +G CR+DH
Sbjct: 79 ------VCRYYQS-GHCSYGDRCRYDH 98
>gi|403270236|ref|XP_003927094.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 416
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGYCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGTRCRYDH 55
>gi|355559437|gb|EHH16165.1| hypothetical protein EGK_11409 [Macaca mulatta]
gi|355746515|gb|EHH51129.1| hypothetical protein EGM_10459 [Macaca fascicularis]
gi|384946168|gb|AFI36689.1| putative E3 ubiquitin-protein ligase makorin-2 [Macaca mulatta]
Length = 416
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGYCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGTRCRYDH 55
>gi|118344188|ref|NP_001071917.1| zinc finger protein [Ciona intestinalis]
gi|92081526|dbj|BAE93310.1| zinc finger protein [Ciona intestinalis]
Length = 335
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 12/79 (15%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C Y GTC YG C F+H ++ +R +C +++ G C++G
Sbjct: 197 CTTYYTIGTCPYGDKCNFYHTEDEKNS------------TRVKTRLCKSWNSSGACEYGE 244
Query: 217 TCRFDHPYAGYPINYGLSL 235
C F H + Y +
Sbjct: 245 RCDFAHGSEELVVKYKTRM 263
>gi|2687591|gb|AAC53567.1| clipper/cleavage and polyadenylation specificity factor 30 kDa
subunit homolog [Mus musculus]
Length = 208
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 207
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 81 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 138
Query: 208 MYGICKFGPTCRFDHPYAGYPI 229
+ G C GP+C+F HP P+
Sbjct: 139 LVGFCPEGPSCKFMHPRFELPM 160
>gi|11037478|gb|AAG27596.1|AF277171_1 Makorin RING zinc-finger protein 2 [Mus musculus]
Length = 416
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGYCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGARCRYDH 55
>gi|223468620|ref|NP_038474.2| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Homo sapiens]
gi|67477468|sp|Q9UHC7.3|MKRN1_HUMAN RecName: Full=E3 ubiquitin-protein ligase makorin-1; AltName:
Full=RING finger protein 61
gi|12053135|emb|CAB66746.1| hypothetical protein [Homo sapiens]
gi|23273984|gb|AAH37400.1| Makorin ring finger protein 1 [Homo sapiens]
gi|40787667|gb|AAH64838.1| Makorin ring finger protein 1 [Homo sapiens]
gi|51094780|gb|EAL24026.1| makorin, ring finger protein, 1 [Homo sapiens]
gi|119604355|gb|EAW83949.1| makorin, ring finger protein, 1, isoform CRA_a [Homo sapiens]
gi|123983178|gb|ABM83330.1| makorin, ring finger protein, 1 [synthetic construct]
gi|157928042|gb|ABW03317.1| makorin, ring finger protein, 1 [synthetic construct]
gi|189054945|dbj|BAG37929.1| unnamed protein product [Homo sapiens]
Length = 482
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|402865000|ref|XP_003896727.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Papio anubis]
Length = 486
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|114616323|ref|XP_519424.2| PREDICTED: E3 ubiquitin-protein ligase makorin-1 isoform 5 [Pan
troglodytes]
gi|410218038|gb|JAA06238.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410264694|gb|JAA20313.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410304624|gb|JAA30912.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410329651|gb|JAA33772.1| makorin ring finger protein 1 [Pan troglodytes]
Length = 482
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|56605708|ref|NP_001008315.1| probable E3 ubiquitin-protein ligase makorin-2 [Rattus norvegicus]
gi|54035497|gb|AAH83870.1| Makorin, ring finger protein, 2 [Rattus norvegicus]
Length = 417
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGYCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGARCRYDH 55
>gi|6601434|gb|AAF18979.1| makorin 1 [Homo sapiens]
gi|19684160|gb|AAH25955.1| Makorin ring finger protein 1 [Homo sapiens]
gi|261858840|dbj|BAI45942.1| Makorin-1 (RING finger protein 61) [synthetic construct]
Length = 482
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|297669963|ref|XP_002813152.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2 isoform 1
[Pongo abelii]
Length = 416
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGYCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGARCRYDH 55
>gi|255718555|ref|XP_002555558.1| KLTH0G12100p [Lachancea thermotolerans]
gi|238936942|emb|CAR25121.1| KLTH0G12100p [Lachancea thermotolerans CBS 6340]
Length = 279
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C + G+CKYG +C+F H + + +N ++P C N+ G C +G
Sbjct: 182 CESFSTKGSCKYGHNCQFAHGLQELKFKERNN----KFRTKP----CVNWMRTGSCPYGQ 233
Query: 217 TCRFDH 222
C F H
Sbjct: 234 RCCFKH 239
>gi|157117752|ref|XP_001658920.1| hypothetical protein AaeL_AAEL000198 [Aedes aegypti]
gi|108884587|gb|EAT48812.1| AAEL000198-PA [Aedes aegypti]
Length = 551
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 27/103 (26%)
Query: 141 LSASSQNLPERPD-QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 199
+S + PE + +P CR+Y G C +G C+F H PG
Sbjct: 373 VSDEDEKRPEETEPKPVCRFYTR-GQCTWGMSCRFLH---------------------PG 410
Query: 200 QAICSNYSMYGICKFGPTCRFDHPYAGYPI----NYGLSLPPL 238
NY+M+ + + P PYA +P+ +Y + PP+
Sbjct: 411 VTDKGNYTMFDMVRPVPIPHQPPPYAAHPVVYQSDYRIERPPM 453
>gi|410906761|ref|XP_003966860.1| PREDICTED: uncharacterized protein LOC101079369 [Takifugu rubripes]
Length = 317
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 12/78 (15%)
Query: 157 CRYYMNTGTCKYGADCKFHHPK---------ERIAQSA---ASNIGPLGLPSRPGQAICS 204
CR + + G C +G C F H + + + + A AS P +P C
Sbjct: 142 CRTFCSFGICPFGTRCNFLHVEGHNSDAESPDGVREKAPLPASPYAPQARELKPRLPFCH 201
Query: 205 NYSMYGICKFGPTCRFDH 222
++ +G C G CRF H
Sbjct: 202 TFTTFGFCLNGTRCRFQH 219
>gi|6572964|gb|AAF17487.1|AF192784_1 makorin 1 [Homo sapiens]
Length = 482
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|241951540|ref|XP_002418492.1| mRNA 3'-end-processing protein, putative [Candida dubliniensis
CD36]
gi|223641831|emb|CAX43793.1| mRNA 3'-end-processing protein, putative [Candida dubliniensis
CD36]
Length = 216
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASN-----IGPLGLPSRPGQAICSNYS 207
P+C +Y G C ++C + H P+ +I + N GP + +C Y
Sbjct: 97 PECLFYSKNGYCTQTSECLYLHVDPQSKIPECLNYNQGFCSEGPNCKNRHVRRVLCPLY- 155
Query: 208 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 241
+YG C GP C F HP + N L + P +++
Sbjct: 156 LYGFCPKGPECEFTHPKFDFH-NLNLRIRPDNLI 188
>gi|88853570|ref|NP_075779.2| probable E3 ubiquitin-protein ligase makorin-2 [Mus musculus]
gi|341940955|sp|Q9ERV1.2|MKRN2_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase makorin-2
gi|12847323|dbj|BAB27523.1| unnamed protein product [Mus musculus]
gi|19344037|gb|AAH25547.1| Makorin, ring finger protein, 2 [Mus musculus]
gi|26346839|dbj|BAC37068.1| unnamed protein product [Mus musculus]
gi|148667116|gb|EDK99532.1| makorin, ring finger protein, 2 [Mus musculus]
Length = 416
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGYCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGARCRYDH 55
>gi|68486577|ref|XP_712839.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|68486632|ref|XP_712810.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|74584839|sp|Q59T36.1|YTH1_CANAL RecName: Full=mRNA 3'-end-processing protein YTH1
gi|46434225|gb|EAK93641.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|46434255|gb|EAK93670.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|238882336|gb|EEQ45974.1| protein YTH1 [Candida albicans WO-1]
Length = 215
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASN-----IGPLGLPSRPGQAICSNYS 207
P+C +Y G C ++C + H P+ +I + N GP + +C Y
Sbjct: 97 PECLFYSKNGYCTQTSECLYLHVDPQSKIPECLNYNQGFCSEGPNCKNRHVRRVLCPLY- 155
Query: 208 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 241
+YG C GP C F HP + N L + P +++
Sbjct: 156 LYGFCPKGPECEFTHPKFDFH-NLNLRIRPDNLI 188
>gi|47221719|emb|CAG10191.1| unnamed protein product [Tetraodon nigroviridis]
Length = 351
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+CKYG C+F H + L + C + G C +GP
Sbjct: 41 CRPFEENGSCKYGEKCQFAHGYHELRS--------LSRHPKYKTEPCRTFHTIGFCPYGP 92
Query: 217 TCRFDH 222
C F H
Sbjct: 93 RCHFIH 98
>gi|410218042|gb|JAA06240.1| makorin ring finger protein 1 [Pan troglodytes]
Length = 482
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|406697273|gb|EKD00538.1| hypothetical protein A1Q2_05203 [Trichosporon asahii var. asahii
CBS 8904]
Length = 618
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSSLGTALP 38
C ++ RTG C+ G C+F H +P S + P
Sbjct: 457 CKFFARTGKCRHGAKCRFEHTRPESATSTAP 487
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 186
+P C+++ TG C++GA C+F H + A S A
Sbjct: 454 RPVCKFFARTGKCRHGAKCRFEHTRPESATSTA 486
>gi|62088176|dbj|BAD92535.1| makorin, ring finger protein, 1 variant [Homo sapiens]
Length = 409
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 55 QVTCRYFMH-GVCKEGDNCRYSH----------------DLSDSPYSVVC-KYFQRGYCI 96
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 97 YGDRCRYEH 105
>gi|402859353|ref|XP_003894127.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2 isoform 1
[Papio anubis]
Length = 416
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S I Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTI--------------CKYYQKGYCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGTRCRYDH 55
>gi|403213908|emb|CCK68410.1| hypothetical protein KNAG_0A07570 [Kazachstania naganishii CBS
8797]
Length = 215
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 25/117 (21%)
Query: 155 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASNIGPLGLPSRPGQA---------IC 203
P+C Y+ G C DC++ H P+ RI + + LG S Q IC
Sbjct: 93 PECVYFAKNGYCTQSPDCQYLHVDPQSRIPRCEYYD---LGFCSEGAQCKNRHVKKNGIC 149
Query: 204 SNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETS 260
Y + G C G C +HP + P ++ D S+ N I + I T
Sbjct: 150 QRY-LNGFCPVGRECSDEHP----------AFPDDALTDVSVRNRVGIKKDYEINTR 195
>gi|393247884|gb|EJD55391.1| hypothetical protein AURDEDRAFT_109731 [Auricularia delicata
TFB-10046 SS5]
Length = 723
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G+C+YG C+F H ++ + + + + IC + + G C +G
Sbjct: 395 CRSWEEKGSCRYGPKCQFAHGEDELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 446
Query: 217 TCRFDH 222
C F H
Sbjct: 447 RCCFIH 452
>gi|383412891|gb|AFH29659.1| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Macaca mulatta]
Length = 482
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|325182946|emb|CCA17401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 772
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 21/88 (23%)
Query: 153 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ------------ 200
D+ +C +Y G C +G +C++ H K +A+ L S+ +
Sbjct: 112 DRMECAFY-RQGFCSHGPNCRYRHIK--LAREECPETADFALQSKVAEEENVKRRKTQPV 168
Query: 201 ------AICSNYSMYGICKFGPTCRFDH 222
AIC ++ G C FG C F H
Sbjct: 169 NEFYKIAICKHWEKLGSCPFGDECHFAH 196
>gi|383417145|gb|AFH31786.1| E3 ubiquitin-protein ligase makorin-1 isoform 2 [Macaca mulatta]
Length = 329
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|380787373|gb|AFE65562.1| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Macaca mulatta]
gi|384939788|gb|AFI33499.1| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Macaca mulatta]
Length = 482
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|95768217|gb|ABF57338.1| makorin, ring finger protein, 2 [Bos taurus]
Length = 172
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S + Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTV--------------CKYYQKGCCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGARCRYDH 55
>gi|223468622|ref|NP_001138597.1| E3 ubiquitin-protein ligase makorin-1 isoform 2 [Homo sapiens]
gi|89885440|emb|CAJ84705.1| makorin-1 [Homo sapiens]
Length = 329
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|325192979|emb|CCA27361.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 275
Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C+ + G+C+YGA C+F H + Q + C +Y G C +G
Sbjct: 84 CKRFREFGSCRYGAKCQFAHGFSELRQVVRH--------PKYKTTKCKSYWGSGHCPYGS 135
Query: 217 TCRFDH 222
CRF H
Sbjct: 136 RCRFIH 141
>gi|345785049|ref|XP_541624.3| PREDICTED: LOW QUALITY PROTEIN: tristetraprolin [Canis lupus
familiaris]
Length = 330
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 112 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTKVCHKFYLQGGCPYGS 163
Query: 217 TCRF 220
C F
Sbjct: 164 RCHF 167
>gi|148703429|gb|EDL35376.1| muscleblind-like 1 (Drosophila), isoform CRA_d [Mus musculus]
Length = 350
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 80/206 (38%), Gaps = 34/206 (16%)
Query: 23 CKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSL-PTWSLQRAPYLSSRLQG 81
CK+ HP P L T L + G +L + + + +Q A ++ P LQ P S
Sbjct: 69 CKYLHP-PPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFS----- 122
Query: 82 TQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSPTSIAGSNLIYSSRNQGDLGAGAQMHI 140
V+PS + +N Y+G + P L P I + + + N G A
Sbjct: 123 --------VAPSLATSASAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAA--- 171
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGA-DCKFHHPKERIAQSAASNIGPLGLPSRPG 199
+A++Q L CR Y G C G DC+F HP + N
Sbjct: 172 -AAAAQKLMRTDRLEVCREYQR-GNCNRGENDCRFAHPADSTMIDTNDNTV--------- 220
Query: 200 QAICSNYSMYGICKFGPTCRFDHPYA 225
+C +Y + G C C++ HP A
Sbjct: 221 -TVCMDY-IKGRCS-REKCKYFHPPA 243
>gi|118344564|ref|NP_001072050.1| probable E3 ubiquitin-protein ligase makorin-1 [Takifugu rubripes]
gi|75570704|sp|Q5NU14.1|MKRN1_TAKRU RecName: Full=Probable E3 ubiquitin-protein ligase makorin-1
gi|56709991|dbj|BAD80899.1| makorin RING zinc finger protein 1a [Takifugu rubripes]
Length = 429
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 17/66 (25%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CRY+M+ G CK G +C++ H S+P +C + G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHDL---------------TSSKPAAMMCKFFQK-GNCVFGE 66
Query: 217 TCRFDH 222
CRF+H
Sbjct: 67 RCRFEH 72
>gi|353228768|emb|CCD74939.1| putative propionyl-CoA carboxylase alpha subunit [Schistosoma
mansoni]
Length = 915
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 9/67 (13%)
Query: 157 CRYYMN-TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
C+Y+ G C G C F H E + P P Q IC NYS G C +G
Sbjct: 817 CKYFQEHGGYCPVGVKCHFAHGIEELRD-------PKSHPKFRSQ-ICRNYSTTGNCSYG 868
Query: 216 PTCRFDH 222
C F H
Sbjct: 869 DKCYFKH 875
>gi|334182742|ref|NP_173577.2| zinc finger CCCH domain-containing protein [Arabidopsis thaliana]
gi|332191999|gb|AEE30120.1| zinc finger CCCH domain-containing protein [Arabidopsis thaliana]
Length = 2166
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 8 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLT 40
CP + TGSC G+ CK HHP+ S G T
Sbjct: 2046 CPVFEATGSCSQGLKCKLHHPKNQSKGRKRKRT 2078
>gi|114053291|ref|NP_001039454.1| probable E3 ubiquitin-protein ligase makorin-2 [Bos taurus]
gi|82571561|gb|AAI10202.1| Makorin ring finger protein 2 [Bos taurus]
Length = 416
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G C+ G+ C F H +A S S + Y G C
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHD---LANSKPSTV--------------CKYYQKGCCA 46
Query: 214 FGPTCRFDH 222
+G CR+DH
Sbjct: 47 YGARCRYDH 55
>gi|6563240|gb|AAF17214.1|AF117233_1 znf-xp protein [Homo sapiens]
Length = 328
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 18/69 (26%)
Query: 154 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 213
Q CRY+M+ G CK G +C++ H L P +C Y G C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHD----------------LSDSPYSVVC-KYFQRGYCI 99
Query: 214 FGPTCRFDH 222
+G CR++H
Sbjct: 100 YGDRCRYEH 108
>gi|367015960|ref|XP_003682479.1| hypothetical protein TDEL_0F04570 [Torulaspora delbrueckii]
gi|359750141|emb|CCE93268.1| hypothetical protein TDEL_0F04570 [Torulaspora delbrueckii]
Length = 245
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
Query: 157 CRYYMNTGTCKYGADCKFHH-PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 215
C + G CKYG C+F H +E + A+N ++P C N+S G C +G
Sbjct: 158 CESFTTKGHCKYGNKCQFAHGLQELKIKPRATN-----FRTKP----CINWSKLGYCPYG 208
Query: 216 PTCRFDH 222
C F H
Sbjct: 209 KRCCFKH 215
>gi|443916613|gb|ELU37617.1| zf-CCCH domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 179
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 19/70 (27%)
Query: 157 CRYYMNTGTCKYGADCKFHH----PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 212
CR+Y ++G C+YG DC+F H P +++ S S +C NY C
Sbjct: 68 CRFY-SSGMCEYGKDCRFLHVVPEPADQVQASPKST-----------STLCRNYPG---C 112
Query: 213 KFGPTCRFDH 222
+G C F H
Sbjct: 113 AYGDRCDFKH 122
>gi|293332510|ref|NP_001169334.1| uncharacterized protein LOC100383201 [Zea mays]
gi|224028765|gb|ACN33458.1| unknown [Zea mays]
gi|414885168|tpg|DAA61182.1| TPA: hypothetical protein ZEAMMB73_523623 [Zea mays]
Length = 607
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 14/70 (20%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
C ++++G+C+ G+ C + H +E + + +C ++ G C+ GP
Sbjct: 319 CFKFVSSGSCQRGSRCSYRHDEEAVEHYQ--------------RNVCFDFLNKGKCERGP 364
Query: 217 TCRFDHPYAG 226
C+F H +G
Sbjct: 365 ECKFVHSLSG 374
>gi|145552858|ref|XP_001462104.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429942|emb|CAK94731.1| unnamed protein product [Paramecium tetraurelia]
Length = 214
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 11/66 (16%)
Query: 157 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 216
CR + G C+Y C F H RI SA+ P C + G+C FG
Sbjct: 72 CRNFQEKGYCQYKDKCSFIHEPCRIENSASRRTKP-----------CRCFFSMGVCPFGL 120
Query: 217 TCRFDH 222
C++ H
Sbjct: 121 NCQYAH 126
>gi|148703431|gb|EDL35378.1| muscleblind-like 1 (Drosophila), isoform CRA_f [Mus musculus]
Length = 329
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 80/206 (38%), Gaps = 34/206 (16%)
Query: 23 CKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGSL-PTWSLQRAPYLSSRLQG 81
CK+ HP P L T L + G +L + + + +Q A ++ P LQ P S
Sbjct: 66 CKYLHP-PPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFS----- 119
Query: 82 TQSYMPLIVSPSQGIVPAPGWNTYMGNIGP-LSPTSIAGSNLIYSSRNQGDLGAGAQMHI 140
V+PS + +N Y+G + P L P I + + + N G A
Sbjct: 120 --------VAPSLATSASAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAA--- 168
Query: 141 LSASSQNLPERPDQPDCRYYMNTGTCKYGA-DCKFHHPKERIAQSAASNIGPLGLPSRPG 199
+A++Q L CR Y G C G DC+F HP + N
Sbjct: 169 -AAAAQKLMRTDRLEVCREYQR-GNCNRGENDCRFAHPADSTMIDTNDNTV--------- 217
Query: 200 QAICSNYSMYGICKFGPTCRFDHPYA 225
+C +Y + G C C++ HP A
Sbjct: 218 -TVCMDY-IKGRCS-REKCKYFHPPA 240
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.130 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,576,335,007
Number of Sequences: 23463169
Number of extensions: 237561119
Number of successful extensions: 487101
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 1115
Number of HSP's that attempted gapping in prelim test: 477312
Number of HSP's gapped (non-prelim): 7706
length of query: 319
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 177
effective length of database: 9,027,425,369
effective search space: 1597854290313
effective search space used: 1597854290313
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)