Query 021008
Match_columns 318
No_of_seqs 284 out of 938
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 11:23:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021008.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021008hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fpf_A Mtnas, putative unchara 100.0 1.2E-51 4.2E-56 390.4 18.5 260 1-276 1-267 (298)
2 4gek_A TRNA (CMO5U34)-methyltr 99.8 6.3E-18 2.1E-22 156.2 15.8 127 97-231 50-178 (261)
3 1pjz_A Thiopurine S-methyltran 99.7 1.2E-16 4E-21 141.1 9.3 102 120-226 21-135 (203)
4 3dr5_A Putative O-methyltransf 99.7 2.6E-16 8.8E-21 141.6 9.5 104 123-232 58-164 (221)
5 3r3h_A O-methyltransferase, SA 99.6 2.2E-16 7.4E-21 143.8 8.3 107 120-232 59-171 (242)
6 3duw_A OMT, O-methyltransferas 99.6 2.8E-15 9.5E-20 132.6 14.8 107 120-232 57-168 (223)
7 2gb4_A Thiopurine S-methyltran 99.6 2.3E-15 7.9E-20 138.3 13.4 106 120-229 67-189 (252)
8 3tfw_A Putative O-methyltransf 99.6 2.3E-15 7.8E-20 136.9 13.1 107 120-232 62-171 (248)
9 3dlc_A Putative S-adenosyl-L-m 99.6 2.3E-15 7.9E-20 131.0 11.5 107 120-231 42-148 (219)
10 3orh_A Guanidinoacetate N-meth 99.6 1.2E-15 3.9E-20 138.1 9.6 107 119-231 58-170 (236)
11 1sui_A Caffeoyl-COA O-methyltr 99.6 2E-15 6.8E-20 137.8 11.1 106 120-231 78-190 (247)
12 3bus_A REBM, methyltransferase 99.6 8.6E-15 2.9E-19 132.9 15.2 108 119-231 59-166 (273)
13 3c3y_A Pfomt, O-methyltransfer 99.6 2.3E-15 7.8E-20 136.2 11.3 107 120-232 69-182 (237)
14 3tr6_A O-methyltransferase; ce 99.6 2.4E-15 8.2E-20 133.0 11.0 107 120-232 63-175 (225)
15 3ntv_A MW1564 protein; rossman 99.6 1.6E-15 5.6E-20 136.2 9.9 105 120-231 70-176 (232)
16 3dh0_A SAM dependent methyltra 99.6 1.8E-15 6E-20 132.9 9.4 149 119-273 35-193 (219)
17 3jwg_A HEN1, methyltransferase 99.6 7.1E-15 2.4E-19 129.5 13.2 109 120-231 28-141 (219)
18 3dtn_A Putative methyltransfer 99.6 6E-15 2E-19 131.0 12.5 105 120-231 43-148 (234)
19 1nkv_A Hypothetical protein YJ 99.6 4.1E-15 1.4E-19 133.6 11.5 107 119-231 34-140 (256)
20 3jwh_A HEN1; methyltransferase 99.6 1.6E-14 5.5E-19 127.2 15.0 109 120-231 28-141 (217)
21 3mti_A RRNA methylase; SAM-dep 99.6 7.2E-15 2.5E-19 126.1 12.4 108 119-232 20-136 (185)
22 3u81_A Catechol O-methyltransf 99.6 1.8E-15 6.1E-20 134.5 8.0 108 120-231 57-170 (221)
23 3f4k_A Putative methyltransfer 99.6 1.1E-14 3.8E-19 130.8 13.0 106 120-231 45-150 (257)
24 3vc1_A Geranyl diphosphate 2-C 99.6 1.8E-14 6.2E-19 134.5 14.5 105 120-231 116-221 (312)
25 3lcc_A Putative methyl chlorid 99.6 7.1E-15 2.4E-19 131.0 10.9 106 120-231 65-171 (235)
26 2o57_A Putative sarcosine dime 99.6 1.4E-14 4.7E-19 133.5 13.0 106 120-231 81-187 (297)
27 3kkz_A Uncharacterized protein 99.6 1.3E-14 4.3E-19 132.0 12.1 106 120-231 45-150 (267)
28 3ujc_A Phosphoethanolamine N-m 99.6 2.1E-14 7.3E-19 128.9 13.1 106 119-231 53-159 (266)
29 3c3p_A Methyltransferase; NP_9 99.6 5.4E-15 1.9E-19 130.0 9.0 106 120-232 55-161 (210)
30 3g5t_A Trans-aconitate 3-methy 99.6 2E-14 6.7E-19 133.2 13.1 107 119-229 34-147 (299)
31 3e05_A Precorrin-6Y C5,15-meth 99.6 3.7E-14 1.3E-18 123.9 14.0 105 119-231 38-142 (204)
32 2p8j_A S-adenosylmethionine-de 99.6 2E-14 6.8E-19 125.0 12.1 106 120-231 22-128 (209)
33 1kpg_A CFA synthase;, cyclopro 99.6 5.4E-14 1.9E-18 128.9 15.6 106 119-231 62-168 (287)
34 4htf_A S-adenosylmethionine-de 99.6 1.6E-14 5.3E-19 132.6 11.7 107 119-231 66-173 (285)
35 3cbg_A O-methyltransferase; cy 99.6 5.5E-15 1.9E-19 133.0 8.4 107 120-232 71-183 (232)
36 3g2m_A PCZA361.24; SAM-depende 99.5 1.7E-14 5.7E-19 133.7 11.0 108 119-232 80-191 (299)
37 2avd_A Catechol-O-methyltransf 99.5 1.2E-14 3.9E-19 128.9 9.4 107 120-232 68-180 (229)
38 2xvm_A Tellurite resistance pr 99.5 2.4E-14 8.1E-19 123.2 11.1 105 120-231 31-136 (199)
39 3ocj_A Putative exported prote 99.5 1.2E-14 4.2E-19 135.3 9.8 110 119-231 116-227 (305)
40 3njr_A Precorrin-6Y methylase; 99.5 9.1E-14 3.1E-18 122.9 14.9 103 119-232 53-155 (204)
41 3p9n_A Possible methyltransfer 99.5 1E-13 3.5E-18 119.9 14.9 109 120-233 43-155 (189)
42 3hem_A Cyclopropane-fatty-acyl 99.5 1E-13 3.6E-18 128.4 15.9 106 119-231 70-183 (302)
43 1vl5_A Unknown conserved prote 99.5 1.7E-14 5.9E-19 130.4 10.1 104 120-231 36-140 (260)
44 2fk8_A Methoxy mycolic acid sy 99.5 1.6E-13 5.4E-18 128.0 16.6 105 120-231 89-194 (318)
45 3eey_A Putative rRNA methylase 99.5 6.6E-14 2.3E-18 121.3 13.1 112 119-232 20-140 (197)
46 3mgg_A Methyltransferase; NYSG 99.5 2.8E-14 9.4E-19 129.9 11.1 108 120-232 36-143 (276)
47 3hm2_A Precorrin-6Y C5,15-meth 99.5 1E-13 3.5E-18 117.3 13.3 104 119-231 23-127 (178)
48 3g5l_A Putative S-adenosylmeth 99.5 7.9E-14 2.7E-18 125.3 12.7 102 120-231 43-145 (253)
49 3ofk_A Nodulation protein S; N 99.5 7.8E-14 2.7E-18 122.3 12.3 103 120-231 50-154 (216)
50 3hnr_A Probable methyltransfer 99.5 1.7E-13 5.9E-18 120.2 14.4 101 120-231 44-145 (220)
51 1xdz_A Methyltransferase GIDB; 99.5 3E-14 1E-18 128.3 9.6 103 120-231 69-174 (240)
52 1zx0_A Guanidinoacetate N-meth 99.5 5.4E-14 1.9E-18 125.9 10.9 107 119-231 58-170 (236)
53 2gpy_A O-methyltransferase; st 99.5 3.6E-14 1.2E-18 126.6 9.6 105 120-231 53-160 (233)
54 1wzn_A SAM-dependent methyltra 99.5 2.7E-13 9.3E-18 121.6 15.3 104 120-231 40-145 (252)
55 2hnk_A SAM-dependent O-methylt 99.5 3.8E-14 1.3E-18 127.3 9.5 106 120-231 59-181 (239)
56 3g07_A 7SK snRNA methylphospha 99.5 5.2E-14 1.8E-18 130.9 10.7 109 120-231 45-220 (292)
57 3m70_A Tellurite resistance pr 99.5 9E-14 3.1E-18 127.6 12.0 104 120-231 119-223 (286)
58 1jsx_A Glucose-inhibited divis 99.5 3.6E-14 1.2E-18 123.6 8.9 102 121-232 65-166 (207)
59 3dxy_A TRNA (guanine-N(7)-)-me 99.5 5.9E-14 2E-18 125.9 10.5 109 120-232 33-151 (218)
60 3g89_A Ribosomal RNA small sub 99.5 1E-13 3.4E-18 126.9 12.2 103 120-231 79-184 (249)
61 2kw5_A SLR1183 protein; struct 99.5 1.4E-13 4.8E-18 119.4 12.5 103 120-231 29-131 (202)
62 1yzh_A TRNA (guanine-N(7)-)-me 99.5 2.4E-13 8.2E-18 119.9 14.1 109 120-232 40-157 (214)
63 3sm3_A SAM-dependent methyltra 99.5 1.9E-13 6.5E-18 120.2 13.2 107 120-231 29-141 (235)
64 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.7E-13 5.9E-18 121.7 12.9 109 120-232 37-154 (213)
65 3gu3_A Methyltransferase; alph 99.5 7.5E-14 2.6E-18 128.7 10.8 108 120-233 21-128 (284)
66 3dp7_A SAM-dependent methyltra 99.5 2.4E-13 8.3E-18 130.2 14.5 107 120-231 178-287 (363)
67 2qe6_A Uncharacterized protein 99.5 4.3E-13 1.5E-17 124.3 15.3 108 120-232 76-197 (274)
68 1ve3_A Hypothetical protein PH 99.5 5.7E-13 2E-17 117.0 15.3 106 120-232 37-143 (227)
69 2ex4_A Adrenal gland protein A 99.5 1.1E-13 3.8E-18 123.9 10.8 106 121-231 79-185 (241)
70 1xxl_A YCGJ protein; structura 99.5 1.6E-13 5.5E-18 123.0 11.0 105 119-231 19-124 (239)
71 1ri5_A MRNA capping enzyme; me 99.5 5.4E-13 1.9E-17 121.8 14.6 109 119-231 62-174 (298)
72 3ggd_A SAM-dependent methyltra 99.5 4.8E-13 1.6E-17 119.6 13.9 103 120-231 55-163 (245)
73 2yqz_A Hypothetical protein TT 99.5 3.1E-13 1.1E-17 121.3 12.7 103 120-230 38-140 (263)
74 1xtp_A LMAJ004091AAA; SGPP, st 99.5 6.9E-13 2.4E-17 118.6 14.8 105 120-231 92-197 (254)
75 3l8d_A Methyltransferase; stru 99.5 2.4E-13 8.3E-18 120.7 11.6 102 120-231 52-153 (242)
76 4hg2_A Methyltransferase type 99.5 6.3E-14 2.1E-18 129.2 8.0 98 120-231 38-135 (257)
77 1dus_A MJ0882; hypothetical pr 99.5 6E-13 2E-17 113.2 13.5 108 120-233 51-159 (194)
78 3ou2_A SAM-dependent methyltra 99.5 1.5E-12 5.3E-17 113.3 16.3 102 120-232 45-147 (218)
79 3h2b_A SAM-dependent methyltra 99.5 2E-13 7E-18 118.5 10.5 101 121-232 41-142 (203)
80 4fsd_A Arsenic methyltransfera 99.5 1.8E-13 6.1E-18 132.2 11.0 109 120-231 82-203 (383)
81 2pxx_A Uncharacterized protein 99.5 3.2E-13 1.1E-17 117.2 11.3 126 95-233 21-161 (215)
82 3cgg_A SAM-dependent methyltra 99.5 5.6E-13 1.9E-17 113.5 12.6 103 119-232 44-148 (195)
83 2p35_A Trans-aconitate 2-methy 99.4 3.1E-13 1E-17 121.3 11.0 102 119-231 31-132 (259)
84 1y8c_A S-adenosylmethionine-de 99.4 5.8E-13 2E-17 117.9 12.6 104 120-231 36-142 (246)
85 3bkw_A MLL3908 protein, S-aden 99.4 3.9E-13 1.3E-17 119.3 11.4 102 120-231 42-144 (243)
86 3thr_A Glycine N-methyltransfe 99.4 5.6E-13 1.9E-17 122.3 12.5 107 120-231 56-175 (293)
87 2vdw_A Vaccinia virus capping 99.4 2.1E-13 7.2E-18 128.3 9.7 108 121-232 48-170 (302)
88 3i53_A O-methyltransferase; CO 99.4 1.2E-12 4.1E-17 123.2 14.7 106 120-231 168-274 (332)
89 3pfg_A N-methyltransferase; N, 99.4 8E-13 2.7E-17 119.6 12.9 100 120-231 49-151 (263)
90 3cvo_A Methyltransferase-like 99.4 7.5E-13 2.6E-17 118.6 12.2 100 120-231 29-154 (202)
91 2p7i_A Hypothetical protein; p 99.4 6.1E-13 2.1E-17 117.6 11.5 100 120-232 41-142 (250)
92 2esr_A Methyltransferase; stru 99.4 3E-13 1E-17 115.2 8.9 107 120-232 30-139 (177)
93 2gs9_A Hypothetical protein TT 99.4 9.1E-13 3.1E-17 115.0 12.1 108 109-232 25-133 (211)
94 2fyt_A Protein arginine N-meth 99.4 1.2E-12 4.2E-17 124.8 14.0 104 120-228 63-168 (340)
95 3ckk_A TRNA (guanine-N(7)-)-me 99.4 7.3E-13 2.5E-17 120.1 11.8 110 120-232 45-169 (235)
96 3bkx_A SAM-dependent methyltra 99.4 1.1E-12 3.8E-17 119.0 13.0 109 119-231 41-159 (275)
97 1nt2_A Fibrillarin-like PRE-rR 99.4 9.6E-13 3.3E-17 117.2 12.3 102 120-231 56-161 (210)
98 3dli_A Methyltransferase; PSI- 99.4 7.2E-13 2.5E-17 118.5 11.4 99 120-232 40-141 (240)
99 3e23_A Uncharacterized protein 99.4 6.6E-13 2.3E-17 116.1 10.8 99 120-231 42-141 (211)
100 2ift_A Putative methylase HI07 99.4 4E-13 1.4E-17 118.2 9.4 106 121-232 53-164 (201)
101 3d2l_A SAM-dependent methyltra 99.4 1.3E-12 4.5E-17 115.8 12.9 103 120-231 32-137 (243)
102 3mb5_A SAM-dependent methyltra 99.4 4.2E-13 1.4E-17 120.9 9.8 104 119-231 91-194 (255)
103 3uwp_A Histone-lysine N-methyl 99.4 1.9E-12 6.4E-17 127.5 14.5 107 119-231 171-288 (438)
104 2r3s_A Uncharacterized protein 99.4 1.1E-12 3.7E-17 122.8 12.2 107 120-231 164-271 (335)
105 3r0q_C Probable protein argini 99.4 1.6E-12 5.5E-17 125.6 13.6 105 120-231 62-169 (376)
106 3gwz_A MMCR; methyltransferase 99.4 3.8E-12 1.3E-16 122.1 16.1 106 120-231 201-307 (369)
107 3gjy_A Spermidine synthase; AP 99.4 6E-13 2.1E-17 126.7 10.2 108 122-233 90-202 (317)
108 3sso_A Methyltransferase; macr 99.4 4.9E-13 1.7E-17 131.2 9.5 115 96-232 199-325 (419)
109 3lec_A NADB-rossmann superfami 99.4 1.2E-12 4.1E-17 119.4 11.4 107 120-232 20-126 (230)
110 3mcz_A O-methyltransferase; ad 99.4 2.2E-12 7.6E-17 122.0 13.7 108 120-231 177-287 (352)
111 2b2c_A Spermidine synthase; be 99.4 4.5E-13 1.6E-17 127.0 8.9 110 120-232 107-223 (314)
112 3grz_A L11 mtase, ribosomal pr 99.4 1.7E-12 5.9E-17 113.2 11.9 101 120-231 59-159 (205)
113 3mq2_A 16S rRNA methyltransfer 99.4 7.7E-13 2.6E-17 116.5 9.8 106 119-231 25-140 (218)
114 3adn_A Spermidine synthase; am 99.4 8.5E-13 2.9E-17 124.0 10.4 109 120-231 82-198 (294)
115 2bm8_A Cephalosporin hydroxyla 99.4 4E-13 1.4E-17 121.7 7.8 101 120-232 80-188 (236)
116 3lbf_A Protein-L-isoaspartate 99.4 1.9E-12 6.4E-17 113.1 11.8 101 119-233 75-176 (210)
117 1l3i_A Precorrin-6Y methyltran 99.4 2.1E-12 7.3E-17 109.6 11.8 104 119-231 31-134 (192)
118 1p91_A Ribosomal RNA large sub 99.4 2.2E-12 7.6E-17 117.0 12.7 95 120-231 84-178 (269)
119 1fbn_A MJ fibrillarin homologu 99.4 2.9E-12 9.8E-17 114.5 13.0 102 119-230 72-177 (230)
120 2ip2_A Probable phenazine-spec 99.4 2.1E-12 7.1E-17 121.3 12.6 103 123-231 169-272 (334)
121 3ege_A Putative methyltransfer 99.4 4.7E-13 1.6E-17 121.7 7.9 98 120-231 33-130 (261)
122 4df3_A Fibrillarin-like rRNA/T 99.4 2.6E-12 8.8E-17 117.4 12.7 104 119-230 75-181 (233)
123 1x19_A CRTF-related protein; m 99.4 4.3E-12 1.5E-16 120.8 14.8 106 120-231 189-295 (359)
124 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.2E-12 4.1E-17 117.5 10.4 105 119-232 94-199 (258)
125 3evz_A Methyltransferase; NYSG 99.4 3.9E-12 1.3E-16 112.6 13.5 109 119-233 53-181 (230)
126 1qzz_A RDMB, aclacinomycin-10- 99.4 4.2E-12 1.5E-16 120.8 14.2 106 120-232 181-288 (374)
127 3p2e_A 16S rRNA methylase; met 99.4 1.3E-12 4.4E-17 117.7 10.0 105 119-229 22-137 (225)
128 3fzg_A 16S rRNA methylase; met 99.4 5.9E-13 2E-17 118.7 7.5 105 120-231 48-152 (200)
129 1g8a_A Fibrillarin-like PRE-rR 99.4 2.8E-12 9.6E-17 113.7 12.0 104 119-230 71-177 (227)
130 3ccf_A Cyclopropane-fatty-acyl 99.4 1.9E-12 6.6E-17 118.4 11.1 99 120-231 56-154 (279)
131 2ipx_A RRNA 2'-O-methyltransfe 99.4 2.6E-12 8.8E-17 114.7 11.6 104 119-230 75-181 (233)
132 2aot_A HMT, histamine N-methyl 99.4 1E-12 3.4E-17 121.6 9.1 109 120-231 51-172 (292)
133 1xj5_A Spermidine synthase 1; 99.4 1.4E-12 4.8E-17 124.7 10.3 109 120-231 119-235 (334)
134 3m33_A Uncharacterized protein 99.4 2.4E-12 8.1E-17 114.6 10.9 124 80-228 14-139 (226)
135 2fpo_A Methylase YHHF; structu 99.4 2.1E-12 7.1E-17 113.7 10.3 104 121-231 54-160 (202)
136 1i9g_A Hypothetical protein RV 99.4 2E-12 6.9E-17 118.0 10.5 106 119-232 97-204 (280)
137 2frn_A Hypothetical protein PH 99.4 1.7E-12 5.8E-17 120.2 10.0 102 120-232 124-226 (278)
138 3q7e_A Protein arginine N-meth 99.4 3.9E-12 1.3E-16 121.6 12.8 106 120-230 65-172 (349)
139 3bgv_A MRNA CAP guanine-N7 met 99.4 3.9E-12 1.3E-16 118.6 12.5 109 120-232 33-156 (313)
140 2vdv_E TRNA (guanine-N(7)-)-me 99.4 3.2E-12 1.1E-16 115.5 11.6 108 120-231 48-173 (246)
141 1mjf_A Spermidine synthase; sp 99.4 1.2E-12 4.1E-17 121.6 8.9 107 120-231 74-193 (281)
142 3kr9_A SAM-dependent methyltra 99.4 3.1E-12 1E-16 116.3 11.3 108 120-233 14-121 (225)
143 3gnl_A Uncharacterized protein 99.4 4.2E-12 1.4E-16 116.8 12.2 109 120-234 20-128 (244)
144 2fhp_A Methylase, putative; al 99.4 7E-13 2.4E-17 113.0 6.6 107 120-232 43-155 (187)
145 3lpm_A Putative methyltransfer 99.4 3.3E-12 1.1E-16 116.3 11.4 106 121-230 49-175 (259)
146 3bxo_A N,N-dimethyltransferase 99.4 6.4E-12 2.2E-16 111.1 12.9 100 120-231 39-141 (239)
147 3e8s_A Putative SAM dependent 99.3 2.7E-12 9.3E-17 112.0 9.9 100 120-233 51-154 (227)
148 1yb2_A Hypothetical protein TA 99.3 2.2E-12 7.4E-17 118.6 9.7 104 119-232 108-212 (275)
149 4dzr_A Protein-(glutamine-N5) 99.3 2.2E-13 7.6E-18 118.0 2.7 106 120-231 29-165 (215)
150 1o54_A SAM-dependent O-methylt 99.3 2.6E-12 8.9E-17 117.9 10.0 105 119-232 110-214 (277)
151 2a14_A Indolethylamine N-methy 99.3 2.2E-12 7.7E-17 117.8 9.5 109 119-231 53-197 (263)
152 2yvl_A TRMI protein, hypotheti 99.3 6.1E-12 2.1E-16 112.2 12.1 102 120-232 90-191 (248)
153 1iy9_A Spermidine synthase; ro 99.3 1.8E-12 6E-17 120.3 8.9 112 120-233 74-191 (275)
154 2pbf_A Protein-L-isoaspartate 99.3 1.5E-12 5.2E-17 115.2 8.1 105 119-232 78-194 (227)
155 1i1n_A Protein-L-isoaspartate 99.3 1.8E-12 6E-17 114.7 8.3 105 119-232 75-183 (226)
156 2i7c_A Spermidine synthase; tr 99.3 2.9E-12 9.9E-17 119.2 10.1 110 120-232 77-193 (283)
157 3i9f_A Putative type 11 methyl 99.3 3.2E-12 1.1E-16 107.9 9.3 137 120-273 16-160 (170)
158 3gdh_A Trimethylguanosine synt 99.3 1.7E-13 5.7E-18 122.5 1.3 105 120-231 77-181 (241)
159 3bwc_A Spermidine synthase; SA 99.3 2.5E-12 8.6E-17 120.8 9.3 112 120-233 94-212 (304)
160 1tw3_A COMT, carminomycin 4-O- 99.3 1.1E-11 3.7E-16 117.6 13.7 105 120-231 182-288 (360)
161 2ozv_A Hypothetical protein AT 99.3 6.9E-12 2.4E-16 114.9 11.4 110 120-231 35-170 (260)
162 1ixk_A Methyltransferase; open 99.3 6.4E-12 2.2E-16 118.6 11.2 110 119-231 116-246 (315)
163 2avn_A Ubiquinone/menaquinone 99.3 6.9E-12 2.3E-16 113.7 11.0 99 120-231 53-152 (260)
164 2yxd_A Probable cobalt-precorr 99.3 1.5E-11 5.2E-16 103.7 12.4 98 120-231 34-131 (183)
165 3htx_A HEN1; HEN1, small RNA m 99.3 1.5E-11 5E-16 129.5 14.7 111 120-233 720-836 (950)
166 2o07_A Spermidine synthase; st 99.3 2.8E-12 9.7E-17 120.8 8.5 110 120-231 94-209 (304)
167 1uir_A Polyamine aminopropyltr 99.3 2.5E-12 8.6E-17 121.4 8.1 110 120-231 76-195 (314)
168 4dcm_A Ribosomal RNA large sub 99.3 8.1E-12 2.8E-16 121.0 11.7 108 120-231 221-334 (375)
169 2pt6_A Spermidine synthase; tr 99.3 6.3E-12 2.1E-16 119.3 10.5 112 120-233 115-232 (321)
170 1u2z_A Histone-lysine N-methyl 99.3 1.9E-11 6.4E-16 120.9 14.3 108 119-231 240-359 (433)
171 1g6q_1 HnRNP arginine N-methyl 99.3 1.8E-11 6.2E-16 115.9 13.4 105 120-229 37-143 (328)
172 1ws6_A Methyltransferase; stru 99.3 1.5E-12 5.1E-17 109.2 5.2 101 121-231 41-147 (171)
173 2yxe_A Protein-L-isoaspartate 99.3 2E-11 6.7E-16 107.0 12.6 106 119-234 75-180 (215)
174 1dl5_A Protein-L-isoaspartate 99.3 1.3E-11 4.4E-16 116.1 12.1 102 119-231 73-175 (317)
175 3giw_A Protein of unknown func 99.3 1.8E-11 6.1E-16 114.5 12.8 109 120-231 77-200 (277)
176 2g72_A Phenylethanolamine N-me 99.3 4E-12 1.4E-16 117.0 8.4 109 120-231 70-215 (289)
177 2y1w_A Histone-arginine methyl 99.3 2.2E-11 7.4E-16 116.3 13.6 105 120-230 49-154 (348)
178 3ajd_A Putative methyltransfer 99.3 8.8E-12 3E-16 115.0 10.3 109 119-231 81-211 (274)
179 3tma_A Methyltransferase; thum 99.3 2.4E-11 8.4E-16 115.7 13.5 111 120-233 202-319 (354)
180 2i62_A Nicotinamide N-methyltr 99.3 1.3E-11 4.4E-16 110.8 10.9 107 120-231 55-198 (265)
181 2nxc_A L11 mtase, ribosomal pr 99.3 1.4E-11 4.9E-16 112.4 11.4 115 104-231 104-218 (254)
182 3iv6_A Putative Zn-dependent a 99.3 2.6E-11 8.8E-16 112.4 13.2 102 119-233 43-150 (261)
183 1inl_A Spermidine synthase; be 99.3 8.8E-12 3E-16 116.8 10.0 112 120-233 89-207 (296)
184 3dmg_A Probable ribosomal RNA 99.3 1.6E-11 5.6E-16 119.3 12.2 105 120-231 232-340 (381)
185 2b25_A Hypothetical protein; s 99.3 7E-12 2.4E-16 118.4 9.4 106 119-232 103-220 (336)
186 4a6d_A Hydroxyindole O-methylt 99.3 5.8E-11 2E-15 113.5 15.6 105 120-231 178-283 (353)
187 2b3t_A Protein methyltransfera 99.3 2.9E-11 9.8E-16 111.0 12.8 107 120-231 108-238 (276)
188 3lst_A CALO1 methyltransferase 99.3 1.7E-11 6E-16 116.4 11.5 103 120-231 183-286 (348)
189 1af7_A Chemotaxis receptor met 99.3 5.1E-11 1.8E-15 111.0 14.3 113 121-234 105-255 (274)
190 1nv8_A HEMK protein; class I a 99.3 2.1E-11 7.2E-16 113.6 11.4 108 120-233 122-251 (284)
191 3id6_C Fibrillarin-like rRNA/T 99.3 3.3E-11 1.1E-15 109.9 12.3 104 119-231 74-181 (232)
192 1vbf_A 231AA long hypothetical 99.3 4.8E-11 1.6E-15 105.6 12.7 99 119-232 68-166 (231)
193 2qm3_A Predicted methyltransfe 99.2 3.4E-11 1.2E-15 116.0 12.2 101 120-227 171-273 (373)
194 1o9g_A RRNA methyltransferase; 99.2 8.7E-12 3E-16 112.6 7.6 109 120-230 50-213 (250)
195 1vlm_A SAM-dependent methyltra 99.2 1.9E-11 6.4E-16 107.9 9.6 93 121-231 47-139 (219)
196 2igt_A SAM dependent methyltra 99.2 2E-11 6.7E-16 116.5 10.0 107 120-231 152-272 (332)
197 3a27_A TYW2, uncharacterized p 99.2 2.1E-11 7.1E-16 112.6 9.9 103 119-231 117-219 (272)
198 2h00_A Methyltransferase 10 do 99.2 1.2E-11 4E-16 111.7 7.3 107 121-230 65-191 (254)
199 2cmg_A Spermidine synthase; tr 99.2 8.2E-12 2.8E-16 115.4 6.4 99 120-232 71-172 (262)
200 3b3j_A Histone-arginine methyl 99.2 5.2E-11 1.8E-15 119.0 12.1 104 120-229 157-261 (480)
201 3cc8_A Putative methyltransfer 99.2 4.1E-11 1.4E-15 104.7 9.5 97 120-231 31-130 (230)
202 2pjd_A Ribosomal RNA small sub 99.2 3.1E-11 1E-15 114.8 9.0 105 120-231 195-303 (343)
203 1jg1_A PIMT;, protein-L-isoasp 99.2 1.5E-10 5E-15 103.5 12.1 102 119-233 89-191 (235)
204 3bzb_A Uncharacterized protein 99.2 2.1E-10 7.3E-15 106.1 13.0 105 120-230 78-204 (281)
205 3k6r_A Putative transferase PH 99.2 8.3E-11 2.8E-15 110.0 10.2 113 108-231 113-225 (278)
206 3reo_A (ISO)eugenol O-methyltr 99.2 1.7E-10 5.7E-15 110.8 12.5 98 120-231 202-300 (368)
207 1r18_A Protein-L-isoaspartate( 99.2 3.9E-11 1.3E-15 106.6 7.4 106 119-233 82-196 (227)
208 1ej0_A FTSJ; methyltransferase 99.2 4.5E-11 1.5E-15 99.4 7.2 99 120-232 21-137 (180)
209 3m6w_A RRNA methylase; rRNA me 99.2 2.8E-11 9.7E-16 120.6 6.8 109 119-231 99-229 (464)
210 2frx_A Hypothetical protein YE 99.2 9.2E-11 3.1E-15 117.3 10.3 108 121-231 117-246 (479)
211 3p9c_A Caffeic acid O-methyltr 99.1 2.2E-10 7.6E-15 109.9 12.6 98 120-231 200-298 (364)
212 2b78_A Hypothetical protein SM 99.1 1.4E-10 4.9E-15 112.4 11.1 107 120-231 211-331 (385)
213 4hc4_A Protein arginine N-meth 99.1 2.2E-10 7.6E-15 111.3 12.0 105 120-231 82-189 (376)
214 2as0_A Hypothetical protein PH 99.1 7.6E-11 2.6E-15 114.2 8.7 109 120-232 216-336 (396)
215 4azs_A Methyltransferase WBDD; 99.1 6.6E-11 2.3E-15 120.2 8.6 103 120-228 65-170 (569)
216 3m4x_A NOL1/NOP2/SUN family pr 99.1 5.6E-11 1.9E-15 118.2 7.6 110 119-231 103-234 (456)
217 3frh_A 16S rRNA methylase; met 99.1 3.3E-10 1.1E-14 104.2 12.2 102 120-231 104-206 (253)
218 2yx1_A Hypothetical protein MJ 99.1 2.3E-10 7.7E-15 108.9 11.2 98 120-231 194-291 (336)
219 1wy7_A Hypothetical protein PH 99.1 2.7E-09 9.3E-14 92.7 17.0 100 120-230 48-148 (207)
220 2yxl_A PH0851 protein, 450AA l 99.1 3.4E-10 1.2E-14 111.8 12.3 109 119-231 257-389 (450)
221 2plw_A Ribosomal RNA methyltra 99.1 3.6E-10 1.2E-14 97.7 11.0 97 120-231 21-154 (201)
222 2qfm_A Spermine synthase; sper 99.1 1.6E-10 5.4E-15 111.8 9.5 110 120-232 187-315 (364)
223 3o4f_A Spermidine synthase; am 99.1 2E-10 7E-15 108.2 9.9 112 119-232 81-199 (294)
224 1fp2_A Isoflavone O-methyltran 99.1 2.6E-10 8.8E-15 108.3 10.7 98 120-231 187-288 (352)
225 3c0k_A UPF0064 protein YCCW; P 99.1 1.3E-10 4.6E-15 112.5 8.9 108 120-231 219-339 (396)
226 4dmg_A Putative uncharacterize 99.1 2.9E-10 1E-14 110.9 11.2 105 120-232 213-327 (393)
227 4e2x_A TCAB9; kijanose, tetron 99.1 4.4E-11 1.5E-15 115.8 5.2 101 120-231 106-208 (416)
228 1wxx_A TT1595, hypothetical pr 99.1 1.5E-10 5E-15 111.8 8.5 106 121-232 209-326 (382)
229 1fp1_D Isoliquiritigenin 2'-O- 99.1 4E-10 1.4E-14 107.9 11.1 98 120-231 208-306 (372)
230 3v97_A Ribosomal RNA large sub 99.1 7.7E-10 2.6E-14 115.3 13.7 108 120-232 538-658 (703)
231 1sqg_A SUN protein, FMU protei 99.1 5.1E-10 1.7E-14 109.8 11.4 108 119-231 244-374 (429)
232 1zq9_A Probable dimethyladenos 99.1 5.7E-10 1.9E-14 103.8 10.4 75 119-200 26-100 (285)
233 3tm4_A TRNA (guanine N2-)-meth 99.0 6.6E-10 2.3E-14 107.1 10.9 107 119-229 215-328 (373)
234 3q87_B N6 adenine specific DNA 99.0 4.5E-10 1.5E-14 96.1 8.4 94 120-231 22-123 (170)
235 3dou_A Ribosomal RNA large sub 99.0 7E-10 2.4E-14 97.3 9.1 121 120-261 24-166 (191)
236 1ne2_A Hypothetical protein TA 99.0 2.6E-09 9E-14 92.6 12.6 97 120-231 50-147 (200)
237 3opn_A Putative hemolysin; str 99.0 4.3E-11 1.5E-15 108.5 0.6 97 120-230 36-136 (232)
238 3lcv_B Sisomicin-gentamicin re 99.0 9.2E-10 3.2E-14 102.4 9.4 105 120-231 131-236 (281)
239 2zfu_A Nucleomethylin, cerebra 99.0 4.4E-10 1.5E-14 98.3 6.9 121 120-274 66-192 (215)
240 2jjq_A Uncharacterized RNA met 99.0 2.5E-09 8.5E-14 105.3 12.6 99 120-231 289-387 (425)
241 3bt7_A TRNA (uracil-5-)-methyl 99.0 4.4E-10 1.5E-14 108.1 7.0 100 120-232 212-327 (369)
242 2ld4_A Anamorsin; methyltransf 99.0 2.7E-10 9.2E-15 96.9 4.7 89 119-231 10-101 (176)
243 2b9e_A NOL1/NOP2/SUN domain fa 99.0 3.3E-09 1.1E-13 100.2 12.6 109 119-231 100-234 (309)
244 2wa2_A Non-structural protein 99.0 2E-10 7E-15 106.9 3.3 105 119-231 80-193 (276)
245 2wk1_A NOVP; transferase, O-me 99.0 1.5E-09 5E-14 101.8 9.1 107 120-232 105-245 (282)
246 2nyu_A Putative ribosomal RNA 99.0 2.2E-09 7.5E-14 92.2 9.4 99 120-232 21-146 (196)
247 1zg3_A Isoflavanone 4'-O-methy 99.0 1.9E-09 6.7E-14 102.4 9.9 98 120-231 192-293 (358)
248 2xyq_A Putative 2'-O-methyl tr 99.0 2.2E-09 7.5E-14 100.9 10.0 96 119-231 61-171 (290)
249 1uwv_A 23S rRNA (uracil-5-)-me 98.9 5.9E-09 2E-13 102.4 13.4 100 120-230 285-388 (433)
250 2oxt_A Nucleoside-2'-O-methylt 98.9 2E-10 6.9E-15 106.3 2.6 105 119-231 72-185 (265)
251 3axs_A Probable N(2),N(2)-dime 98.9 1.4E-09 4.8E-14 106.3 7.8 104 120-231 51-158 (392)
252 2dul_A N(2),N(2)-dimethylguano 98.9 1.9E-09 6.6E-14 104.6 8.6 102 121-231 47-164 (378)
253 2h1r_A Dimethyladenosine trans 98.9 4.4E-09 1.5E-13 98.5 9.8 75 119-201 40-114 (299)
254 2qy6_A UPF0209 protein YFCK; s 98.9 4E-09 1.4E-13 97.3 8.9 113 120-233 59-215 (257)
255 2p41_A Type II methyltransfera 98.9 3.5E-09 1.2E-13 99.8 7.9 104 120-234 81-194 (305)
256 3hp7_A Hemolysin, putative; st 98.9 1.4E-09 4.9E-14 102.3 5.1 97 120-230 84-184 (291)
257 3ll7_A Putative methyltransfer 98.8 6.1E-09 2.1E-13 102.3 6.9 75 120-200 92-170 (410)
258 3c6k_A Spermine synthase; sper 98.8 2.2E-08 7.5E-13 97.3 9.9 109 120-231 204-331 (381)
259 3gru_A Dimethyladenosine trans 98.7 7.3E-08 2.5E-12 90.6 12.6 74 119-200 48-121 (295)
260 1m6y_A S-adenosyl-methyltransf 98.7 1.5E-08 5.3E-13 95.5 8.0 78 119-201 24-106 (301)
261 3k0b_A Predicted N6-adenine-sp 98.7 8.6E-08 2.9E-12 93.4 13.1 110 120-232 200-351 (393)
262 3ldg_A Putative uncharacterize 98.7 1.6E-07 5.4E-12 91.3 14.5 110 120-232 193-344 (384)
263 2f8l_A Hypothetical protein LM 98.7 3.3E-08 1.1E-12 93.7 8.9 109 120-234 129-259 (344)
264 2r6z_A UPF0341 protein in RSP 98.7 4.4E-09 1.5E-13 96.9 2.4 77 120-201 82-169 (258)
265 1qam_A ERMC' methyltransferase 98.7 3.5E-07 1.2E-11 83.0 13.9 70 120-197 29-99 (244)
266 3ldu_A Putative methylase; str 98.6 1.5E-07 5.1E-12 91.4 11.7 109 120-231 194-344 (385)
267 2ih2_A Modification methylase 98.6 5E-08 1.7E-12 93.9 7.9 101 120-233 38-166 (421)
268 1yub_A Ermam, rRNA methyltrans 98.6 4E-09 1.4E-13 95.3 -0.2 103 120-231 28-145 (245)
269 2oyr_A UPF0341 protein YHIQ; a 98.6 1.5E-08 5.1E-13 93.7 3.1 80 120-203 85-174 (258)
270 3fut_A Dimethyladenosine trans 98.6 2.8E-07 9.6E-12 85.6 10.5 70 119-198 45-115 (271)
271 3tqs_A Ribosomal RNA small sub 98.5 2.1E-07 7.3E-12 85.5 8.2 70 119-196 27-100 (255)
272 2okc_A Type I restriction enzy 98.4 2.7E-07 9.2E-12 90.7 7.9 112 120-234 170-310 (445)
273 3ftd_A Dimethyladenosine trans 98.4 9.6E-07 3.3E-11 80.7 9.3 99 119-229 29-129 (249)
274 4gqb_A Protein arginine N-meth 98.4 1.5E-06 5.3E-11 89.5 11.3 105 121-228 357-464 (637)
275 3ua3_A Protein arginine N-meth 98.3 1.6E-06 5.3E-11 90.2 10.5 104 122-228 410-531 (745)
276 3v97_A Ribosomal RNA large sub 98.3 4.3E-06 1.5E-10 87.1 12.3 83 148-231 257-347 (703)
277 4fzv_A Putative methyltransfer 98.3 1.5E-06 5E-11 84.0 8.0 110 119-231 146-284 (359)
278 3uzu_A Ribosomal RNA small sub 98.2 1.5E-06 5.1E-11 80.9 7.2 64 119-189 40-104 (279)
279 1qyr_A KSGA, high level kasuga 98.2 1.2E-06 4E-11 80.4 5.7 61 119-189 19-81 (252)
280 2k4m_A TR8_protein, UPF0146 pr 98.1 2.8E-06 9.5E-11 72.4 5.6 87 120-231 34-121 (153)
281 2ar0_A M.ecoki, type I restric 98.1 1.1E-05 3.8E-10 81.6 9.8 113 120-234 168-315 (541)
282 1wg8_A Predicted S-adenosylmet 97.9 1.8E-05 6.3E-10 74.0 7.9 85 106-203 10-99 (285)
283 4auk_A Ribosomal RNA large sub 97.8 9.5E-05 3.2E-09 71.6 11.1 88 119-224 209-296 (375)
284 3s2e_A Zinc-containing alcohol 97.8 8.8E-05 3E-09 69.6 9.5 97 119-231 164-263 (340)
285 3tos_A CALS11; methyltransfera 97.8 0.00027 9.2E-09 65.2 12.6 137 89-232 36-218 (257)
286 3lkd_A Type I restriction-modi 97.7 0.00014 4.9E-09 73.6 11.5 113 120-234 220-361 (542)
287 3khk_A Type I restriction-modi 97.7 2.8E-05 9.5E-10 78.8 6.2 111 121-234 244-398 (544)
288 3two_A Mannitol dehydrogenase; 97.7 3.8E-05 1.3E-09 72.4 6.2 92 119-231 174-265 (348)
289 3m6i_A L-arabinitol 4-dehydrog 97.7 0.00011 3.9E-09 69.4 9.2 97 119-231 177-283 (363)
290 1pl8_A Human sorbitol dehydrog 97.7 9.4E-05 3.2E-09 70.0 8.4 98 119-231 169-273 (356)
291 2h6e_A ADH-4, D-arabinose 1-de 97.6 2.9E-05 9.8E-10 73.1 4.0 98 121-231 170-269 (344)
292 4ej6_A Putative zinc-binding d 97.6 5.4E-05 1.8E-09 72.3 4.9 99 119-231 180-284 (370)
293 3evf_A RNA-directed RNA polyme 97.5 0.00016 5.4E-09 67.4 7.7 120 102-233 59-186 (277)
294 1f8f_A Benzyl alcohol dehydrog 97.5 0.00012 4.1E-09 69.5 6.9 99 119-231 188-289 (371)
295 1e3j_A NADP(H)-dependent ketos 97.5 0.00032 1.1E-08 66.1 9.4 97 119-231 166-271 (352)
296 3fpc_A NADP-dependent alcohol 97.5 0.00017 5.9E-09 67.9 7.4 98 119-231 164-266 (352)
297 3fwz_A Inner membrane protein 97.5 0.00052 1.8E-08 56.3 9.3 96 122-232 7-106 (140)
298 1uuf_A YAHK, zinc-type alcohol 97.5 0.00012 4.2E-09 69.8 5.9 96 119-231 192-288 (369)
299 1kol_A Formaldehyde dehydrogen 97.4 7.1E-05 2.4E-09 71.8 3.9 105 119-231 183-300 (398)
300 1rjw_A ADH-HT, alcohol dehydro 97.4 0.00038 1.3E-08 65.3 8.5 94 119-231 162-261 (339)
301 2dph_A Formaldehyde dismutase; 97.4 4.7E-05 1.6E-09 73.3 2.2 103 119-231 183-299 (398)
302 2vhw_A Alanine dehydrogenase; 97.4 6.7E-05 2.3E-09 72.3 3.1 103 120-231 166-268 (377)
303 3uog_A Alcohol dehydrogenase; 97.4 0.00018 6.3E-09 68.2 6.0 96 119-232 187-288 (363)
304 4eez_A Alcohol dehydrogenase 1 97.3 0.00028 9.4E-09 66.1 6.4 99 119-231 161-263 (348)
305 3uko_A Alcohol dehydrogenase c 97.3 0.00049 1.7E-08 65.5 8.2 97 119-231 191-295 (378)
306 3jv7_A ADH-A; dehydrogenase, n 97.3 0.00014 4.7E-09 68.3 4.3 99 119-232 169-271 (345)
307 3tqh_A Quinone oxidoreductase; 97.3 0.00078 2.7E-08 62.6 9.2 94 119-231 150-245 (321)
308 3p2y_A Alanine dehydrogenase/p 97.3 8.2E-05 2.8E-09 72.3 2.4 100 120-231 182-302 (381)
309 4dio_A NAD(P) transhydrogenase 97.3 0.0001 3.5E-09 72.2 2.9 109 120-231 188-312 (405)
310 3s1s_A Restriction endonucleas 97.3 0.0008 2.7E-08 71.1 9.7 112 120-234 320-468 (878)
311 3ip1_A Alcohol dehydrogenase, 97.3 0.001 3.6E-08 63.9 9.9 100 119-232 211-319 (404)
312 2d8a_A PH0655, probable L-thre 97.3 0.00029 9.8E-09 66.3 5.7 96 121-231 167-267 (348)
313 1vj0_A Alcohol dehydrogenase, 97.3 0.00037 1.3E-08 66.6 6.6 95 119-231 193-298 (380)
314 3goh_A Alcohol dehydrogenase, 97.2 0.00032 1.1E-08 65.0 5.8 90 119-231 140-229 (315)
315 1piw_A Hypothetical zinc-type 97.2 0.00014 4.6E-09 69.0 3.3 99 119-231 177-276 (360)
316 3c85_A Putative glutathione-re 97.2 0.0013 4.4E-08 55.9 9.2 96 121-231 38-139 (183)
317 1e3i_A Alcohol dehydrogenase, 97.2 0.00094 3.2E-08 63.4 9.1 98 119-232 193-298 (376)
318 1p0f_A NADP-dependent alcohol 97.2 0.00083 2.8E-08 63.7 8.7 95 119-231 189-293 (373)
319 2cf5_A Atccad5, CAD, cinnamyl 97.2 0.0002 6.8E-09 67.8 4.2 98 119-231 177-275 (357)
320 1cdo_A Alcohol dehydrogenase; 97.2 0.0011 3.6E-08 63.0 9.2 97 119-231 190-294 (374)
321 1pjc_A Protein (L-alanine dehy 97.2 0.00018 6.3E-09 68.7 3.8 103 120-231 165-267 (361)
322 2px2_A Genome polyprotein [con 97.2 0.0017 5.7E-08 60.0 9.9 153 104-273 60-244 (269)
323 3tka_A Ribosomal RNA small sub 97.2 0.00032 1.1E-08 67.1 5.2 88 106-203 45-138 (347)
324 2dpo_A L-gulonate 3-dehydrogen 97.2 0.0014 4.8E-08 61.8 9.5 99 122-230 6-122 (319)
325 4dvj_A Putative zinc-dependent 97.2 0.00032 1.1E-08 66.7 5.0 95 121-230 171-269 (363)
326 3gcz_A Polyprotein; flavivirus 97.2 0.00035 1.2E-08 65.2 5.1 119 103-233 76-203 (282)
327 1iz0_A Quinone oxidoreductase; 97.1 0.00036 1.2E-08 64.3 5.1 95 119-231 123-218 (302)
328 3qwb_A Probable quinone oxidor 97.1 0.00066 2.3E-08 63.3 6.9 96 119-231 146-247 (334)
329 2dq4_A L-threonine 3-dehydroge 97.1 0.00021 7E-09 67.2 3.4 91 121-231 164-262 (343)
330 2fzw_A Alcohol dehydrogenase c 97.1 0.0013 4.4E-08 62.3 8.9 97 119-231 188-292 (373)
331 3jyn_A Quinone oxidoreductase; 97.1 0.0006 2E-08 63.5 6.5 96 119-232 138-240 (325)
332 4e12_A Diketoreductase; oxidor 97.1 0.00081 2.8E-08 61.7 7.2 102 122-231 4-121 (283)
333 2jhf_A Alcohol dehydrogenase E 97.1 0.0015 5.2E-08 61.9 9.3 97 119-231 189-293 (374)
334 3ggo_A Prephenate dehydrogenas 97.1 0.0022 7.6E-08 60.1 10.0 92 122-229 33-126 (314)
335 2g1u_A Hypothetical protein TM 97.1 0.0012 4.3E-08 54.7 7.4 99 120-232 17-119 (155)
336 3fbg_A Putative arginate lyase 97.1 0.00029 9.9E-09 66.3 3.8 95 121-231 150-248 (346)
337 1yqd_A Sinapyl alcohol dehydro 97.1 0.00037 1.3E-08 66.3 4.6 98 119-231 184-282 (366)
338 2c0c_A Zinc binding alcohol de 97.1 0.0011 3.8E-08 62.8 7.9 96 119-231 161-261 (362)
339 3r24_A NSP16, 2'-O-methyl tran 97.0 0.0037 1.3E-07 58.9 10.9 100 119-235 107-221 (344)
340 4b7c_A Probable oxidoreductase 97.0 0.00035 1.2E-08 65.2 4.0 95 119-231 147-248 (336)
341 2zig_A TTHA0409, putative modi 97.0 0.0017 5.9E-08 60.1 8.6 46 120-169 234-279 (297)
342 1pqw_A Polyketide synthase; ro 97.0 0.00022 7.7E-09 61.3 2.4 97 119-232 36-138 (198)
343 1zcj_A Peroxisomal bifunctiona 97.0 0.0068 2.3E-07 59.8 13.2 99 122-229 37-148 (463)
344 2b5w_A Glucose dehydrogenase; 97.0 0.00025 8.5E-09 67.1 2.7 94 123-231 174-273 (357)
345 4a2c_A Galactitol-1-phosphate 97.0 0.0007 2.4E-08 63.2 5.7 99 119-231 158-260 (346)
346 2uyo_A Hypothetical protein ML 97.0 0.0071 2.4E-07 56.8 12.6 107 120-231 101-218 (310)
347 2eez_A Alanine dehydrogenase; 97.0 0.00041 1.4E-08 66.4 4.0 103 120-231 164-266 (369)
348 1lss_A TRK system potassium up 97.0 0.0083 2.8E-07 47.7 11.1 96 121-231 3-102 (140)
349 3llv_A Exopolyphosphatase-rela 97.0 0.0041 1.4E-07 50.3 9.3 96 122-233 6-105 (141)
350 2efj_A 3,7-dimethylxanthine me 96.9 0.0098 3.4E-07 57.7 13.4 106 122-231 53-225 (384)
351 3nx4_A Putative oxidoreductase 96.9 0.0023 7.7E-08 59.2 8.6 91 124-231 149-241 (324)
352 3b5i_A S-adenosyl-L-methionine 96.9 0.0032 1.1E-07 60.9 9.8 111 121-231 52-225 (374)
353 2vn8_A Reticulon-4-interacting 96.9 0.00055 1.9E-08 65.1 4.2 97 119-231 181-280 (375)
354 2hcy_A Alcohol dehydrogenase 1 96.9 0.00096 3.3E-08 62.6 5.7 94 119-231 167-269 (347)
355 1f0y_A HCDH, L-3-hydroxyacyl-C 96.9 0.0044 1.5E-07 57.1 10.0 98 122-229 15-134 (302)
356 4eye_A Probable oxidoreductase 96.9 0.0011 3.9E-08 62.2 6.0 95 119-231 157-257 (342)
357 2eih_A Alcohol dehydrogenase; 96.9 0.002 6.9E-08 60.3 7.6 96 119-231 164-265 (343)
358 1l7d_A Nicotinamide nucleotide 96.9 0.00047 1.6E-08 66.4 3.2 109 120-231 170-294 (384)
359 3krt_A Crotonyl COA reductase; 96.8 0.0034 1.2E-07 61.4 9.3 98 119-231 226-344 (456)
360 3mog_A Probable 3-hydroxybutyr 96.8 0.0039 1.3E-07 62.1 9.7 100 122-231 5-120 (483)
361 3gms_A Putative NADPH:quinone 96.8 0.0014 4.8E-08 61.3 6.2 95 119-231 142-243 (340)
362 3gaz_A Alcohol dehydrogenase s 96.8 0.00096 3.3E-08 62.7 4.9 95 119-231 148-246 (343)
363 3vyw_A MNMC2; tRNA wobble urid 96.8 0.0018 6E-08 61.2 6.6 115 120-235 95-230 (308)
364 1x13_A NAD(P) transhydrogenase 96.8 0.0003 1E-08 68.4 1.4 99 120-231 170-292 (401)
365 4dup_A Quinone oxidoreductase; 96.8 0.0021 7.2E-08 60.6 7.1 95 119-231 165-265 (353)
366 1id1_A Putative potassium chan 96.8 0.0077 2.6E-07 49.6 9.8 100 122-233 3-107 (153)
367 1jvb_A NAD(H)-dependent alcoho 96.8 0.0019 6.6E-08 60.5 6.6 97 119-231 168-271 (347)
368 1v3u_A Leukotriene B4 12- hydr 96.8 0.0042 1.4E-07 57.7 8.8 96 119-231 143-244 (333)
369 2g5c_A Prephenate dehydrogenas 96.7 0.0075 2.6E-07 54.6 10.2 90 123-229 2-94 (281)
370 2j3h_A NADP-dependent oxidored 96.7 0.0023 7.9E-08 59.7 6.8 97 119-231 153-255 (345)
371 4a0s_A Octenoyl-COA reductase/ 96.7 0.0013 4.5E-08 63.9 5.1 98 119-231 218-336 (447)
372 2cdc_A Glucose dehydrogenase g 96.7 0.0018 6.1E-08 61.3 5.9 92 122-231 181-278 (366)
373 1xa0_A Putative NADPH dependen 96.7 0.0012 4.2E-08 61.2 4.6 97 120-231 147-246 (328)
374 3p8z_A Mtase, non-structural p 96.7 0.012 4.2E-07 53.8 10.8 104 119-231 76-186 (267)
375 3l9w_A Glutathione-regulated p 96.7 0.0057 2E-07 59.7 9.3 96 121-231 3-102 (413)
376 1wly_A CAAR, 2-haloacrylate re 96.7 0.0034 1.1E-07 58.5 7.3 96 119-231 143-244 (333)
377 1m6e_X S-adenosyl-L-methionnin 96.7 0.0057 1.9E-07 58.9 9.0 111 120-231 50-209 (359)
378 3ce6_A Adenosylhomocysteinase; 96.6 0.0016 5.5E-08 65.2 5.4 90 119-231 271-361 (494)
379 3lkz_A Non-structural protein 96.6 0.01 3.6E-07 55.8 10.4 108 119-234 92-207 (321)
380 2f1k_A Prephenate dehydrogenas 96.6 0.01 3.5E-07 53.6 10.2 89 123-229 1-89 (279)
381 1qor_A Quinone oxidoreductase; 96.6 0.002 6.9E-08 59.8 5.6 96 119-231 138-239 (327)
382 3k6j_A Protein F01G10.3, confi 96.6 0.013 4.4E-07 58.1 11.6 100 121-231 53-166 (460)
383 2j8z_A Quinone oxidoreductase; 96.6 0.0036 1.2E-07 59.0 7.2 96 119-231 160-261 (354)
384 1yb5_A Quinone oxidoreductase; 96.6 0.0049 1.7E-07 58.1 8.1 96 119-231 168-269 (351)
385 1ldn_A L-lactate dehydrogenase 96.6 0.023 7.7E-07 53.2 12.5 106 120-230 4-122 (316)
386 1tt7_A YHFP; alcohol dehydroge 96.6 0.0014 4.8E-08 60.9 4.2 95 120-231 148-247 (330)
387 3ado_A Lambda-crystallin; L-gu 96.6 0.0057 2E-07 57.9 8.3 104 120-231 4-123 (319)
388 1zej_A HBD-9, 3-hydroxyacyl-CO 96.5 0.0087 3E-07 55.9 9.3 97 120-231 10-107 (293)
389 3gg2_A Sugar dehydrogenase, UD 96.5 0.0076 2.6E-07 59.4 9.3 102 123-231 3-122 (450)
390 2y0c_A BCEC, UDP-glucose dehyd 96.5 0.0043 1.5E-07 61.6 7.4 105 120-231 6-128 (478)
391 3c24_A Putative oxidoreductase 96.5 0.012 4.1E-07 53.6 9.8 87 123-229 12-99 (286)
392 2ew2_A 2-dehydropantoate 2-red 96.4 0.013 4.5E-07 53.2 9.7 99 123-230 4-107 (316)
393 3eld_A Methyltransferase; flav 96.4 0.0053 1.8E-07 57.6 7.0 120 102-233 66-193 (300)
394 3pi7_A NADH oxidoreductase; gr 96.4 0.0045 1.6E-07 58.0 6.6 91 123-231 166-263 (349)
395 3gqv_A Enoyl reductase; medium 96.4 0.0026 8.8E-08 60.5 4.8 97 120-231 163-263 (371)
396 3b1f_A Putative prephenate deh 96.4 0.014 4.8E-07 53.0 9.4 91 122-228 6-98 (290)
397 3k96_A Glycerol-3-phosphate de 96.4 0.011 3.9E-07 56.3 9.1 98 121-229 28-131 (356)
398 1gu7_A Enoyl-[acyl-carrier-pro 96.3 0.0018 6.1E-08 61.0 3.0 102 119-231 164-275 (364)
399 2v6b_A L-LDH, L-lactate dehydr 96.3 0.036 1.2E-06 51.5 11.8 99 123-229 1-114 (304)
400 3l4b_C TRKA K+ channel protien 96.3 0.016 5.4E-07 50.6 8.8 96 123-232 1-100 (218)
401 1i4w_A Mitochondrial replicati 96.2 0.01 3.5E-07 56.9 8.1 60 121-187 58-117 (353)
402 3pvc_A TRNA 5-methylaminomethy 96.2 0.0046 1.6E-07 63.6 5.9 106 121-231 58-211 (689)
403 1y6j_A L-lactate dehydrogenase 96.2 0.02 6.7E-07 53.8 9.7 105 120-230 5-122 (318)
404 2zb4_A Prostaglandin reductase 96.2 0.0072 2.5E-07 56.8 6.7 97 119-231 156-260 (357)
405 2wtb_A MFP2, fatty acid multif 96.2 0.021 7.3E-07 59.5 10.9 99 123-231 313-427 (725)
406 1zsy_A Mitochondrial 2-enoyl t 96.2 0.007 2.4E-07 57.0 6.6 96 119-231 165-270 (357)
407 1rjd_A PPM1P, carboxy methyl t 96.1 0.038 1.3E-06 52.3 11.1 104 120-228 96-229 (334)
408 4ezb_A Uncharacterized conserv 96.0 0.014 4.8E-07 54.5 7.6 92 122-231 24-121 (317)
409 3d4o_A Dipicolinate synthase s 96.0 0.018 6.1E-07 53.1 7.9 90 120-229 153-242 (293)
410 3g79_A NDP-N-acetyl-D-galactos 95.9 0.05 1.7E-06 54.1 11.7 105 120-231 16-147 (478)
411 4e21_A 6-phosphogluconate dehy 95.9 0.013 4.3E-07 56.2 7.1 94 121-231 21-115 (358)
412 3ic5_A Putative saccharopine d 95.9 0.036 1.2E-06 42.5 8.6 70 121-201 4-77 (118)
413 1wdk_A Fatty oxidation complex 95.9 0.017 5.8E-07 60.1 8.6 101 121-231 313-429 (715)
414 2xxj_A L-LDH, L-lactate dehydr 95.9 0.069 2.4E-06 49.9 12.0 104 123-231 1-116 (310)
415 3n58_A Adenosylhomocysteinase; 95.9 0.0078 2.7E-07 59.7 5.5 113 99-234 222-336 (464)
416 2hmt_A YUAA protein; RCK, KTN, 95.8 0.025 8.7E-07 44.9 7.5 97 121-232 5-105 (144)
417 3gvp_A Adenosylhomocysteinase 95.8 0.011 3.8E-07 58.2 6.3 112 100-235 196-310 (435)
418 2rir_A Dipicolinate synthase, 95.8 0.019 6.5E-07 53.0 7.5 90 120-229 155-244 (300)
419 1mv8_A GMD, GDP-mannose 6-dehy 95.8 0.025 8.4E-07 55.1 8.6 102 123-231 1-123 (436)
420 1ez4_A Lactate dehydrogenase; 95.8 0.053 1.8E-06 50.9 10.5 105 121-230 4-120 (318)
421 1lld_A L-lactate dehydrogenase 95.8 0.037 1.3E-06 51.0 9.3 102 120-229 5-122 (319)
422 3zwc_A Peroxisomal bifunctiona 95.7 0.053 1.8E-06 56.8 11.4 100 123-231 317-429 (742)
423 3hwr_A 2-dehydropantoate 2-red 95.7 0.04 1.4E-06 51.2 9.5 98 120-230 17-119 (318)
424 3d1l_A Putative NADP oxidoredu 95.7 0.033 1.1E-06 49.9 8.6 92 122-231 10-102 (266)
425 2aef_A Calcium-gated potassium 95.7 0.032 1.1E-06 49.1 8.4 95 120-232 7-106 (234)
426 3g0o_A 3-hydroxyisobutyrate de 95.7 0.027 9.4E-07 51.8 8.1 93 121-231 6-102 (303)
427 1bg6_A N-(1-D-carboxylethyl)-L 95.7 0.024 8.4E-07 52.6 7.8 99 122-230 4-108 (359)
428 2hjr_A Malate dehydrogenase; m 95.7 0.064 2.2E-06 50.4 10.6 103 121-231 13-131 (328)
429 3d0o_A L-LDH 1, L-lactate dehy 95.7 0.087 3E-06 49.3 11.5 107 121-231 5-123 (317)
430 3pid_A UDP-glucose 6-dehydroge 95.6 0.028 9.4E-07 55.3 8.2 104 120-231 34-153 (432)
431 1g60_A Adenine-specific methyl 95.6 0.031 1.1E-06 50.5 8.0 46 120-169 211-256 (260)
432 4a7p_A UDP-glucose dehydrogena 95.6 0.016 5.4E-07 57.2 6.3 105 120-231 6-129 (446)
433 2o3j_A UDP-glucose 6-dehydroge 95.5 0.024 8.3E-07 56.1 7.6 104 123-231 10-135 (481)
434 1t2d_A LDH-P, L-lactate dehydr 95.5 0.093 3.2E-06 49.3 11.2 103 121-231 3-126 (322)
435 3gt0_A Pyrroline-5-carboxylate 95.5 0.01 3.4E-07 53.1 4.3 87 123-228 3-94 (247)
436 2zqz_A L-LDH, L-lactate dehydr 95.5 0.099 3.4E-06 49.2 11.3 106 120-230 7-124 (326)
437 3pqe_A L-LDH, L-lactate dehydr 95.4 0.13 4.6E-06 48.4 12.0 107 120-231 3-122 (326)
438 3ond_A Adenosylhomocysteinase; 95.4 0.03 1E-06 55.9 7.8 112 100-234 241-354 (488)
439 3tri_A Pyrroline-5-carboxylate 95.4 0.039 1.3E-06 50.5 8.0 97 122-235 3-101 (280)
440 3ktd_A Prephenate dehydrogenas 95.4 0.017 5.7E-07 55.0 5.6 92 120-228 6-98 (341)
441 1pzg_A LDH, lactate dehydrogen 95.4 0.042 1.4E-06 51.8 8.3 104 120-231 7-132 (331)
442 3qha_A Putative oxidoreductase 95.4 0.034 1.2E-06 51.1 7.5 91 122-231 15-105 (296)
443 3lk7_A UDP-N-acetylmuramoylala 95.4 0.1 3.5E-06 50.9 11.3 76 120-205 7-84 (451)
444 4dll_A 2-hydroxy-3-oxopropiona 95.3 0.063 2.1E-06 49.9 9.2 93 121-231 30-124 (320)
445 3ps9_A TRNA 5-methylaminomethy 95.3 0.032 1.1E-06 57.0 7.7 110 121-231 66-219 (676)
446 1vpd_A Tartronate semialdehyde 95.3 0.034 1.2E-06 50.5 7.1 89 123-229 6-97 (299)
447 3h9u_A Adenosylhomocysteinase; 95.3 0.013 4.6E-07 57.7 4.6 112 100-235 187-301 (436)
448 2h78_A Hibadh, 3-hydroxyisobut 95.3 0.052 1.8E-06 49.6 8.4 90 123-230 4-96 (302)
449 1x0v_A GPD-C, GPDH-C, glycerol 95.3 0.031 1.1E-06 52.1 6.9 96 123-229 9-122 (354)
450 1a5z_A L-lactate dehydrogenase 95.3 0.096 3.3E-06 48.8 10.3 101 123-230 1-115 (319)
451 2cvz_A Dehydrogenase, 3-hydrox 95.2 0.051 1.7E-06 48.9 8.0 88 123-230 2-89 (289)
452 3hn2_A 2-dehydropantoate 2-red 95.2 0.025 8.5E-07 52.4 6.0 97 123-229 3-101 (312)
453 2i6t_A Ubiquitin-conjugating e 95.2 0.065 2.2E-06 50.0 8.7 102 120-231 12-125 (303)
454 3vku_A L-LDH, L-lactate dehydr 95.1 0.087 3E-06 49.8 9.6 107 120-231 7-125 (326)
455 2ewd_A Lactate dehydrogenase,; 95.1 0.08 2.7E-06 49.2 9.2 103 121-231 3-121 (317)
456 2oo3_A Protein involved in cat 95.1 0.026 8.8E-07 52.6 5.7 93 126-229 98-196 (283)
457 4gwg_A 6-phosphogluconate dehy 95.1 0.037 1.3E-06 55.1 7.3 99 122-231 4-103 (484)
458 1np3_A Ketol-acid reductoisome 95.1 0.024 8.3E-07 53.4 5.6 94 122-237 16-111 (338)
459 3vtf_A UDP-glucose 6-dehydroge 95.0 0.056 1.9E-06 53.3 8.3 101 123-231 22-144 (444)
460 3ojo_A CAP5O; rossmann fold, c 95.0 0.13 4.5E-06 50.4 10.9 101 120-231 9-129 (431)
461 1txg_A Glycerol-3-phosphate de 95.0 0.039 1.3E-06 50.8 6.8 96 123-229 1-102 (335)
462 2pv7_A T-protein [includes: ch 94.9 0.026 8.8E-07 52.0 5.3 75 123-229 22-97 (298)
463 3pef_A 6-phosphogluconate dehy 94.9 0.029 9.8E-07 51.1 5.5 90 123-231 2-95 (287)
464 3ius_A Uncharacterized conserv 94.9 0.19 6.6E-06 44.6 10.9 66 123-201 6-71 (286)
465 1dlj_A UDP-glucose dehydrogena 94.9 0.048 1.6E-06 52.6 7.3 102 123-232 1-118 (402)
466 2q3e_A UDP-glucose 6-dehydroge 94.9 0.035 1.2E-06 54.7 6.4 102 123-231 6-131 (467)
467 2raf_A Putative dinucleotide-b 94.9 0.065 2.2E-06 46.8 7.4 77 120-235 17-93 (209)
468 2iz1_A 6-phosphogluconate dehy 94.7 0.068 2.3E-06 52.7 8.0 94 123-228 6-100 (474)
469 3dfz_A SIRC, precorrin-2 dehyd 94.7 0.072 2.5E-06 47.8 7.3 105 120-243 29-134 (223)
470 2zyd_A 6-phosphogluconate dehy 94.7 0.063 2.2E-06 53.2 7.6 96 121-228 14-110 (480)
471 1hyh_A L-hicdh, L-2-hydroxyiso 94.6 0.15 5.3E-06 47.0 9.8 99 123-229 2-120 (309)
472 3qsg_A NAD-binding phosphogluc 94.6 0.053 1.8E-06 50.3 6.4 91 121-231 23-117 (312)
473 1evy_A Glycerol-3-phosphate de 94.5 0.067 2.3E-06 50.3 7.1 95 124-229 17-122 (366)
474 1pgj_A 6PGDH, 6-PGDH, 6-phosph 94.5 0.064 2.2E-06 53.1 7.2 98 123-228 2-100 (478)
475 1h2b_A Alcohol dehydrogenase; 94.5 0.043 1.5E-06 51.6 5.7 99 119-231 184-285 (359)
476 1oju_A MDH, malate dehydrogena 94.5 0.19 6.7E-06 46.6 10.0 105 123-231 1-118 (294)
477 3oig_A Enoyl-[acyl-carrier-pro 94.5 0.23 7.8E-06 44.0 10.2 107 120-231 5-147 (266)
478 3c7a_A Octopine dehydrogenase; 94.4 0.058 2E-06 51.5 6.5 94 123-229 3-114 (404)
479 1guz_A Malate dehydrogenase; o 94.4 0.36 1.2E-05 44.7 11.7 102 123-230 1-117 (310)
480 3ghy_A Ketopantoate reductase 94.4 0.025 8.5E-07 52.9 3.7 91 122-229 3-102 (335)
481 3ldh_A Lactate dehydrogenase; 94.3 0.2 6.7E-06 47.5 9.7 105 121-231 20-138 (330)
482 2qyt_A 2-dehydropantoate 2-red 94.2 0.032 1.1E-06 50.8 4.1 102 121-229 7-115 (317)
483 1yj8_A Glycerol-3-phosphate de 94.2 0.055 1.9E-06 51.2 5.9 96 123-229 22-139 (375)
484 3pdu_A 3-hydroxyisobutyrate de 94.2 0.045 1.6E-06 49.8 5.1 90 123-231 2-95 (287)
485 2izz_A Pyrroline-5-carboxylate 94.2 0.08 2.8E-06 49.2 6.7 88 122-229 22-116 (322)
486 3cea_A MYO-inositol 2-dehydrog 94.1 0.19 6.6E-06 46.5 9.3 94 120-229 6-100 (346)
487 3ufb_A Type I restriction-modi 94.1 0.21 7.1E-06 50.1 10.0 124 106-234 205-365 (530)
488 3doj_A AT3G25530, dehydrogenas 94.1 0.044 1.5E-06 50.7 4.8 93 120-231 19-115 (310)
489 1ks9_A KPA reductase;, 2-dehyd 94.1 0.038 1.3E-06 49.6 4.1 92 123-230 1-96 (291)
490 3i83_A 2-dehydropantoate 2-red 94.0 0.064 2.2E-06 49.7 5.7 95 123-229 3-103 (320)
491 1smk_A Malate dehydrogenase, g 94.0 0.24 8.1E-06 46.4 9.7 108 120-231 6-125 (326)
492 2p4q_A 6-phosphogluconate dehy 94.0 0.099 3.4E-06 52.1 7.4 98 121-229 9-107 (497)
493 3cky_A 2-hydroxymethyl glutara 94.0 0.12 4.2E-06 46.8 7.5 91 121-229 3-96 (301)
494 3g7u_A Cytosine-specific methy 93.9 0.49 1.7E-05 45.4 11.9 67 123-200 3-78 (376)
495 4a27_A Synaptic vesicle membra 93.9 0.054 1.8E-06 50.7 5.0 95 119-231 140-238 (349)
496 1jw9_B Molybdopterin biosynthe 93.8 0.078 2.7E-06 47.8 5.7 93 121-220 30-145 (249)
497 3pxx_A Carveol dehydrogenase; 93.7 0.56 1.9E-05 41.8 11.2 106 120-232 8-154 (287)
498 2vz8_A Fatty acid synthase; tr 93.7 0.027 9.1E-07 66.2 2.9 104 120-231 1239-1348(2512)
499 3fr7_A Putative ketol-acid red 93.6 0.17 5.7E-06 50.8 8.1 100 120-236 51-158 (525)
500 3jtm_A Formate dehydrogenase, 93.6 0.046 1.6E-06 52.2 3.8 96 120-233 162-257 (351)
No 1
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=100.00 E-value=1.2e-51 Score=390.44 Aligned_cols=260 Identities=22% Similarity=0.290 Sum_probs=235.8
Q ss_pred CCchhhHHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHh---cC----CCCCcchhhcccccHHHHHHHHHHHHHHhh
Q 021008 1 MVCQNDALVKKVCELYEQISGLESLKPCKDVNMLFTNLVVT---CM----PPNYPIDVTKLCQSVQDIRSKLIRLCGEAE 73 (318)
Q Consensus 1 ~~~~~~~lv~~i~~~~~~i~~l~~l~ps~~vn~lf~~Lv~~---c~----~~~~~~~~~~~~~~~~~l~~~l~~l~~~ae 73 (318)
|.|- ....+|.++|+.|+++.+|+|++.+|+||+.|.++ |. ..+ .++.++.+|+++++++.++++|++++
T Consensus 1 ~~~~--~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~-~~~~vl~~~~~~~l~~~~~~~y~~~~ 77 (298)
T 3fpf_A 1 MSCY--IYWDKIKRIASRLEGMNYHFDEMDTSGVMPLLDEIEEIAHDSTIDFE-SAKHILDDAEMNHALSLIRKFYVNLG 77 (298)
T ss_dssp -CCC--HHHHHHHHHHHHHGGGTTCGGGCCTTTTHHHHHHHHHHHTCTTSCHH-HHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred CcHH--HHHHHHHHHHHHHhcCCCCCccccHHHHHHHHHHHHHhcccCCcCHH-HHHHHhcChhHHHHHHHHHHHHHHHH
Confidence 4454 46899999999999999999999999999955555 44 333 68888899999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCcccccCCcChhhHHHhhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEE
Q 021008 74 GLLESHFSSILASFENPIANLNIFPYYSNYIKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNY 153 (318)
Q Consensus 74 ~~lE~~~A~~l~~~~~P~~~L~~fpY~~ny~~L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gv 153 (318)
+.+|.+||++++++++||++|..||||+||+++++.|+.++. ..++++|||||||++|+|++.+|+. +|++|+||
T Consensus 78 ~~~E~~wa~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~la~---l~~g~rVLDIGcG~G~~ta~~lA~~--~ga~V~gI 152 (298)
T 3fpf_A 78 MKLEMEKAQEVIESDSPWETLRSFYFYPRYLELLKNEAALGR---FRRGERAVFIGGGPLPLTGILLSHV--YGMRVNVV 152 (298)
T ss_dssp HHHHHHHHHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHHTT---CCTTCEEEEECCCSSCHHHHHHHHT--TCCEEEEE
T ss_pred HHHHHHHHHHHhccCChHHhhccCCCcccHHHHHHHHHHHcC---CCCcCEEEEECCCccHHHHHHHHHc--cCCEEEEE
Confidence 999999999999999999999999999999999999987542 5899999999999999999999873 79999999
Q ss_pred eCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 154 DIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 154 Did~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
|+|+++++.||+++++ .|+ ++++|++||+.+++ .++||+||+++++ ++|.+++++++++|||||+|++++++
T Consensus 153 Dis~~~l~~Ar~~~~~-~gl-~~v~~v~gDa~~l~--d~~FDvV~~~a~~----~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 153 EIEPDIAELSRKVIEG-LGV-DGVNVITGDETVID--GLEFDVLMVAALA----EPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp ESSHHHHHHHHHHHHH-HTC-CSEEEEESCGGGGG--GCCCSEEEECTTC----SCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred ECCHHHHHHHHHHHHh-cCC-CCeEEEECchhhCC--CCCcCEEEECCCc----cCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 9999999999999998 888 89999999999986 4689999998764 68999999999999999999999999
Q ss_pred CcccccccCCCccccCCcEEEEEEcCchhHHHHHHHHhhccCC
Q 021008 234 GARAFLYPVVDPSDLLGFEVLSVFHPTDEVINSVVLARKYVMP 276 (318)
Q Consensus 234 g~r~~lYP~v~~~~l~gf~~~~~~~p~~~VvNsvv~ark~~~~ 276 (318)
|++.++||.+++.+++||+.+.+.||.++|+|||++|||...+
T Consensus 225 ~~r~~l~~~v~~~~~~gf~~~~~~~p~~~v~N~vv~a~k~~~~ 267 (298)
T 3fpf_A 225 GMRAILYAPVSDDDITGFRRAGVVLPSGKVNNTSVLVFKCPDK 267 (298)
T ss_dssp GGGGGSSCCCCTGGGTTEEEEEEECCCTTCCCEEEEEEECC--
T ss_pred chhhhccccCChhhhhhhhheeEECCCCCcCcEEEEEEccCCc
Confidence 9999999999999889999999999999999999999998544
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.77 E-value=6.3e-18 Score=156.17 Aligned_cols=127 Identities=17% Similarity=0.193 Sum_probs=103.4
Q ss_pred CcChhhHHHhhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhC-CCCcEEEEEeCChHHHHHHHHHhhcCCCCCC
Q 021008 97 FPYYSNYIKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINH-LTTTCFDNYDIDPSANSKALSLVSSDPDLST 175 (318)
Q Consensus 97 fpY~~ny~~L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~-~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ 175 (318)
-|+|++...++..-.... ..++.||||||||+ |..++.||++. .+|++|+|||+|+++++.|++.++. .+...
T Consensus 50 vP~Y~~~~~~i~~l~~~~----~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~-~~~~~ 123 (261)
T 4gek_A 50 VPGYSNIISMIGMLAERF----VQPGTQVYDLGCSL-GAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDA-YKAPT 123 (261)
T ss_dssp STTHHHHHHHHHHHHHHH----CCTTCEEEEETCTT-THHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHT-SCCSS
T ss_pred CCCHHHHHHHHHHHHHHh----CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHh-hccCc
Confidence 478877776665433322 47889999999996 66667888754 2689999999999999999999988 88889
Q ss_pred CeEEEEccccccCcCCCCccEEEeccc-cCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 176 RMFFHTTDIMNVSSALKDYEVVFLAAL-VGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 176 ri~f~~gDa~~l~~~l~~fD~V~~aal-vgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+++|+++|+.+++. .+||+|+.... ..++.+++.++++++++.|||||+|++.+
T Consensus 124 ~v~~~~~D~~~~~~--~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 124 PVDVIEGDIRDIAI--ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp CEEEEESCTTTCCC--CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEeecccccccc--cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 99999999999865 47998886543 34577888999999999999999999865
No 3
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.67 E-value=1.2e-16 Score=141.12 Aligned_cols=102 Identities=10% Similarity=0.082 Sum_probs=84.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCC-----------CCCCeEEEEccccccC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPD-----------LSTRMFFHTTDIMNVS 188 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~g-----------l~~ri~f~~gDa~~l~ 188 (318)
.++.||||||||+ |..+..||++ |.+|+|||+|++|++.|++.... .+ ...+++|+++|+.+++
T Consensus 21 ~~~~~vLD~GCG~-G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~d~~~l~ 95 (203)
T 1pjz_A 21 VPGARVLVPLCGK-SQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGE-QPHITSQGDFKVYAAPGIEIWCGDFFALT 95 (203)
T ss_dssp CTTCEEEETTTCC-SHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCS-CSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred CCCCEEEEeCCCC-cHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccC-CcccccccccccccCCccEEEECccccCC
Confidence 5789999999996 6777889874 88999999999999999987642 10 1368999999999998
Q ss_pred cCC-CCccEEEec-cccCCChhHHHHHHHHHHHhccCCeE
Q 021008 189 SAL-KDYEVVFLA-ALVGMDKDEKIRVIDHLAKYMAPGAL 226 (318)
Q Consensus 189 ~~l-~~fD~V~~a-alvgm~~~~k~~vl~~l~r~LkpGg~ 226 (318)
... ++||+|+.. ++..++.+++.+++++++++|||||+
T Consensus 96 ~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 96 ARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACS 135 (203)
T ss_dssp HHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEE
T ss_pred cccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcE
Confidence 654 689999953 44456777888999999999999998
No 4
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.65 E-value=2.6e-16 Score=141.59 Aligned_cols=104 Identities=20% Similarity=0.234 Sum_probs=91.4
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCC-CCeEEEEccccccCcCC--CCccEEEe
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLS-TRMFFHTTDIMNVSSAL--KDYEVVFL 199 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~-~ri~f~~gDa~~l~~~l--~~fD~V~~ 199 (318)
.+||+|||| .|.+++++|+.+.++++|+++|+|+++++.|++.++. .|+. ++++|+++|+.+....+ ++||+||+
T Consensus 58 ~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 58 TGAIAITPA-AGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFRE-AGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CEEEEESTT-HHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHH-TTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCEEEEcCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 399999999 5899999998765689999999999999999999998 8998 89999999998864433 58999999
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
++ ++....++++++.+.|||||++++.+.
T Consensus 136 d~----~~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 136 QV----SPMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp CC----CTTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred cC----cHHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 87 346778899999999999999999773
No 5
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.64 E-value=2.2e-16 Score=143.81 Aligned_cols=107 Identities=11% Similarity=0.191 Sum_probs=93.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC------CCC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA------LKD 193 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~------l~~ 193 (318)
.++++||||||| .|.+++.+|+...++++|++||+|+++++.|++.++. .|+.++++|+++|+.+.... .++
T Consensus 59 ~~~~~VLDiG~G-~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~-~g~~~~i~~~~gda~~~l~~~~~~~~~~~ 136 (242)
T 3r3h_A 59 TRAKKVLELGTF-TGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWRE-AKQEHKIKLRLGPALDTLHSLLNEGGEHQ 136 (242)
T ss_dssp HTCSEEEEEESC-CSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHH-TTCTTTEEEEESCHHHHHHHHHHHHCSSC
T ss_pred cCcCEEEEeeCC-cCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEEcCHHHHHHHHhhccCCCC
Confidence 578899999999 5888899998653489999999999999999999998 89989999999999875433 358
Q ss_pred ccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 194 YEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 194 fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
||+||+++ +.....++++++.+.|||||+|++.+.
T Consensus 137 fD~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 137 FDFIFIDA----DKTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEEEEES----CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EeEEEEcC----ChHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 99999987 457788899999999999999999873
No 6
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.64 E-value=2.8e-15 Score=132.65 Aligned_cols=107 Identities=17% Similarity=0.190 Sum_probs=91.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC-----CCCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA-----LKDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~-----l~~f 194 (318)
.++++||+||||+ |..++.+|+.+.++++|+++|+|+++++.|++.+.. .|+.++++|+++|+.+.... .+.|
T Consensus 57 ~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~~~f 134 (223)
T 3duw_A 57 QGARNILEIGTLG-GYSTIWLARGLSSGGRVVTLEASEKHADIARSNIER-ANLNDRVEVRTGLALDSLQQIENEKYEPF 134 (223)
T ss_dssp HTCSEEEEECCTT-SHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHH-TTCTTTEEEEESCHHHHHHHHHHTTCCCC
T ss_pred hCCCEEEEecCCc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEEcCHHHHHHHHHhcCCCCc
Confidence 5789999999995 778888997653389999999999999999999998 89988999999999764222 1479
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|+||+++ ......++++++.+.|+|||++++.+.
T Consensus 135 D~v~~d~----~~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 135 DFIFIDA----DKQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp SEEEECS----CGGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred CEEEEcC----CcHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 9999887 346778999999999999999999874
No 7
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.63 E-value=2.3e-15 Score=138.25 Aligned_cols=106 Identities=11% Similarity=0.098 Sum_probs=86.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc---------CC------CCCCCeEEEEccc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSS---------DP------DLSTRMFFHTTDI 184 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~---------~~------gl~~ri~f~~gDa 184 (318)
.++.||||||||. |..+..||++ |.+|+|||+|+.+++.|++.... .. ....+++|+++|+
T Consensus 67 ~~~~~vLD~GCG~-G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 67 QSGLRVFFPLCGK-AIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp CCSCEEEETTCTT-CTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCCeEEEeCCCC-cHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 4778999999995 6777889973 89999999999999999876531 00 1246899999999
Q ss_pred cccCcCC-CCccEEEec-cccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 185 MNVSSAL-KDYEVVFLA-ALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 185 ~~l~~~l-~~fD~V~~a-alvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
.+++... ++||+|+.. ++..++.+++.+++++++++|||||++++
T Consensus 143 ~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 143 FDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp TTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred ccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 9998654 689999964 34456777889999999999999999864
No 8
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.63 E-value=2.3e-15 Score=136.92 Aligned_cols=107 Identities=16% Similarity=0.224 Sum_probs=91.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc-CcC--CCCccE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV-SSA--LKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l-~~~--l~~fD~ 196 (318)
.++++|||||||+ |..++.+|+.+.++++|+++|+|+++++.|++.++. .|+.++++|+++|+.+. +.. .+.||+
T Consensus 62 ~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~g~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 62 TQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQL-AGVDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp HTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHH-TTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred cCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 5789999999995 788889998653389999999999999999999998 89988999999999873 322 238999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
||+++ +......+++++.+.|||||+|++.+.
T Consensus 140 V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 140 IFIDA----DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp EEECS----CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEECC----chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 99887 456788899999999999999999873
No 9
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.62 E-value=2.3e-15 Score=130.95 Aligned_cols=107 Identities=18% Similarity=0.187 Sum_probs=90.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..++++ ++.+|+|+|+|+.+++.|++.+.. .|+..+++|+++|+.+++...+.||+|+.
T Consensus 42 ~~~~~vLdiG~G~-G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 117 (219)
T 3dlc_A 42 ITAGTCIDIGSGP-GALSIALAKQ--SDFSIRALDFSKHMNEIALKNIAD-ANLNDRIQIVQGDVHNIPIEDNYADLIVS 117 (219)
T ss_dssp CCEEEEEEETCTT-SHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHH-TTCTTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred CCCCEEEEECCCC-CHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHh-ccccCceEEEEcCHHHCCCCcccccEEEE
Confidence 3444999999996 5666778875 789999999999999999999998 88888999999999998877679999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+. ...+..++++++++.|+|||.+++.+
T Consensus 118 ~~~l~-~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 118 RGSVF-FWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp ESCGG-GCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CchHh-hccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 65432 12577889999999999999999875
No 10
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=1.2e-15 Score=138.07 Aligned_cols=107 Identities=7% Similarity=0.054 Sum_probs=88.1
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC--cCCCCccE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS--SALKDYEV 196 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~--~~l~~fD~ 196 (318)
..++.|||+|||| .|.++..+|+. .+.+|||||+||++++.|++.+.. .+.+++++.+|+.++. ...++||.
T Consensus 58 ~~~G~rVLdiG~G-~G~~~~~~~~~--~~~~v~~id~~~~~~~~a~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~FD~ 131 (236)
T 3orh_A 58 SSKGGRVLEVGFG-MAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPR---QTHKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTTCEEEEEECCT-TSHHHHHHTTS--CEEEEEEEECCHHHHHHHHHHGGG---CSSEEEEEESCHHHHGGGSCTTCEEE
T ss_pred ccCCCeEEEECCC-ccHHHHHHHHh--CCcEEEEEeCCHHHHHHHHHHHhh---CCCceEEEeehHHhhcccccccCCce
Confidence 4788999999999 68888889864 467999999999999999999887 3467899999998753 34458999
Q ss_pred EEeccccC----CChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVG----MDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvg----m~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+++..+. ....++.+++++++|+|||||+|++-+
T Consensus 132 i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 98765432 245688999999999999999998865
No 11
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.61 E-value=2e-15 Score=137.83 Aligned_cols=106 Identities=15% Similarity=0.197 Sum_probs=92.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC-------CC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA-------LK 192 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~-------l~ 192 (318)
.++++||+|||| .|++++.+|+.+.++++|+++|+|+++++.|++.++. .|+.++++|+++|+.+.... .+
T Consensus 78 ~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~-~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 78 INAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKK-AGVDHKIDFREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp TTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHH-TTCGGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred hCcCEEEEeCCC-cCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCCeEEEECCHHHHHHHHHhccCCCC
Confidence 578899999999 5899999998753489999999999999999999998 88888999999999874221 35
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.||+||+++ ++.....+++.+.+.|||||++++.+
T Consensus 156 ~fD~V~~d~----~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 156 SYDFIFVDA----DKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp CBSEEEECS----CSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CEEEEEEcC----chHHHHHHHHHHHHhCCCCeEEEEec
Confidence 899999987 34678899999999999999999987
No 12
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.61 E-value=8.6e-15 Score=132.90 Aligned_cols=108 Identities=16% Similarity=0.268 Sum_probs=91.6
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..+..+++++ +++|+|+|+|+++++.|++.+.. .|+.++++|+++|+.+++...++||+|+
T Consensus 59 ~~~~~~vLDiGcG~-G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 134 (273)
T 3bus_A 59 VRSGDRVLDVGCGI-GKPAVRLATAR--DVRVTGISISRPQVNQANARATA-AGLANRVTFSYADAMDLPFEDASFDAVW 134 (273)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHH-TTCTTTEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHh-cCCCcceEEEECccccCCCCCCCccEEE
Confidence 36789999999996 56667788764 89999999999999999999988 8888899999999999887767999998
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....+. ...++.++++++.+.|||||++++.+
T Consensus 135 ~~~~l~-~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 135 ALESLH-HMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EESCTT-TSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred Eechhh-hCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 654332 22467899999999999999998876
No 13
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.61 E-value=2.3e-15 Score=136.18 Aligned_cols=107 Identities=18% Similarity=0.227 Sum_probs=93.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC-------CC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA-------LK 192 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~-------l~ 192 (318)
.++++||+|||| .|.+++++|+.+.++++|+++|+|+++++.|++.++. .|+.++++|+++|+.+.... .+
T Consensus 69 ~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~-~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 69 VNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRK-AGVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp TTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH-TTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred hCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 578999999999 5888899998753489999999999999999999998 88988999999999874221 35
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
.||+||+++ ++.....+++.+.+.|+|||++++.+.
T Consensus 147 ~fD~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 147 SYDFGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp CEEEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CcCEEEECC----chHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 899999987 457888999999999999999999873
No 14
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.61 E-value=2.4e-15 Score=133.00 Aligned_cols=107 Identities=16% Similarity=0.233 Sum_probs=91.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC------CC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL------KD 193 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l------~~ 193 (318)
.++++|||||||+ |..++.+|+.+.++++|+++|+|+++++.|++.++. .|+.++++|+++|+.+..... +.
T Consensus 63 ~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 140 (225)
T 3tr6_A 63 MQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEK-AGLSDKIGLRLSPAKDTLAELIHAGQAWQ 140 (225)
T ss_dssp HTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHH-TTCTTTEEEEESCHHHHHHHHHTTTCTTC
T ss_pred hCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHH-CCCCCceEEEeCCHHHHHHHhhhccCCCC
Confidence 4778999999995 788888997643389999999999999999999998 889889999999997642211 58
Q ss_pred ccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 194 YEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 194 fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
||+||+++ +......+++.+.+.|||||+|++.+.
T Consensus 141 fD~v~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 141 YDLIYIDA----DKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred ccEEEECC----CHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 99999877 356788899999999999999999873
No 15
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.61 E-value=1.6e-15 Score=136.24 Aligned_cols=105 Identities=11% Similarity=0.131 Sum_probs=91.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc--CCCCccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS--ALKDYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~--~l~~fD~V 197 (318)
.++++|||||||+ |..++.+|+. .++.+|+++|+|+++++.|++.++. .|+.++++|+++|+.+... ..++||+|
T Consensus 70 ~~~~~vLDiG~G~-G~~~~~la~~-~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 70 NNVKNILEIGTAI-GYSSMQFASI-SDDIHVTTIERNETMIQYAKQNLAT-YHFENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp HTCCEEEEECCSS-SHHHHHHHTT-CTTCEEEEEECCHHHHHHHHHHHHH-TTCTTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred cCCCEEEEEeCch-hHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEECCHHHHHHhhccCCccEE
Confidence 5789999999995 7888899974 5799999999999999999999998 8888899999999987533 23589999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+++ +.....++++.+.+.|||||+|++.+
T Consensus 147 ~~~~----~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 147 FIDA----AKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEET----TSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEcC----cHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 9876 34567889999999999999999976
No 16
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.60 E-value=1.8e-15 Score=132.90 Aligned_cols=149 Identities=14% Similarity=0.057 Sum_probs=107.0
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..+..+++...++.+|+|+|+|+++++.|++.+.. .++. +++|+.+|+.+++...+.||+|+
T Consensus 35 ~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~-~~~~~~~d~~~~~~~~~~fD~v~ 111 (219)
T 3dh0_A 35 LKEGMTVLDVGTGA-GFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNK-LGLK-NVEVLKSEENKIPLPDNTVDFIF 111 (219)
T ss_dssp CCTTCEEEESSCTT-CTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-HTCT-TEEEEECBTTBCSSCSSCEEEEE
T ss_pred CCCCCEEEEEecCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH-cCCC-cEEEEecccccCCCCCCCeeEEE
Confidence 36788999999996 555567777644678999999999999999999887 6664 89999999999877667899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEcCCCcc----cccccCCCccc----cC--CcEEEEEEcCchhHHHHHH
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGAR----AFLYPVVDPSD----LL--GFEVLSVFHPTDEVINSVV 268 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~g~r----~~lYP~v~~~~----l~--gf~~~~~~~p~~~VvNsvv 268 (318)
....+. ...+..++++++.+.|+|||.+++.+..... .......+.++ ++ ||+...+....+. ...+
T Consensus 112 ~~~~l~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~--~~~~ 188 (219)
T 3dh0_A 112 MAFTFH-ELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGKY--CFGV 188 (219)
T ss_dssp EESCGG-GCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETTT--EEEE
T ss_pred eehhhh-hcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCCc--eEEE
Confidence 765442 1246789999999999999999987622111 11111122332 22 9998766544332 2355
Q ss_pred HHhhc
Q 021008 269 LARKY 273 (318)
Q Consensus 269 ~ark~ 273 (318)
+++|.
T Consensus 189 ~~~k~ 193 (219)
T 3dh0_A 189 YAMIV 193 (219)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 66664
No 17
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.60 E-value=7.1e-15 Score=129.46 Aligned_cols=109 Identities=12% Similarity=0.175 Sum_probs=88.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCC----CeEEEEccccccCcCCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLST----RMFFHTTDIMNVSSALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~----ri~f~~gDa~~l~~~l~~fD 195 (318)
.++.+|||||||+ |..+..++++ .+..+|+|+|+|+.+++.|++.+.. .++.. +++|+++|+..++...++||
T Consensus 28 ~~~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 104 (219)
T 3jwg_A 28 VNAKKVIDLGCGE-GNLLSLLLKD-KSFEQITGVDVSYSVLERAKDRLKI-DRLPEMQRKRISLFQSSLVYRDKRFSGYD 104 (219)
T ss_dssp TTCCEEEEETCTT-CHHHHHHHTS-TTCCEEEEEESCHHHHHHHHHHHTG-GGSCHHHHTTEEEEECCSSSCCGGGTTCS
T ss_pred cCCCEEEEecCCC-CHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHHHh-hccccccCcceEEEeCcccccccccCCCC
Confidence 5789999999996 5566677764 3568999999999999999999887 66654 89999999987766667899
Q ss_pred EEEecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+....+ +++.++..++++++++.|||||+++...
T Consensus 105 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 105 AATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 99965533 5555667899999999999999776654
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.60 E-value=6e-15 Score=131.00 Aligned_cols=105 Identities=13% Similarity=0.159 Sum_probs=88.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++.+ |+++|+|+|+|+.+++.|++.+.. .+ +++|+++|+.+++.. +.||+|+.
T Consensus 43 ~~~~~vLDiG~G~-G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~-~~---~~~~~~~d~~~~~~~-~~fD~v~~ 115 (234)
T 3dtn_A 43 TENPDILDLGAGT-GLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRG-NL---KVKYIEADYSKYDFE-EKYDMVVS 115 (234)
T ss_dssp CSSCEEEEETCTT-SHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCS-CT---TEEEEESCTTTCCCC-SCEEEEEE
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhcc-CC---CEEEEeCchhccCCC-CCceEEEE
Confidence 5779999999996 55566777764 899999999999999999999876 33 899999999998766 79999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++..++.++++++++.|||||.+++.+
T Consensus 116 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 116 ALSIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 6533 5565677789999999999999999866
No 19
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.60 E-value=4.1e-15 Score=133.57 Aligned_cols=107 Identities=17% Similarity=0.152 Sum_probs=90.2
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..++.+|+.+ +++|+|+|+|+.+++.|++.++. .|+..+++|+++|+.++++ .++||+|+
T Consensus 34 ~~~~~~VLDiGcG~-G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~v~~~~~d~~~~~~-~~~fD~V~ 108 (256)
T 1nkv_A 34 MKPGTRILDLGSGS-GEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEE-LGVSERVHFIHNDAAGYVA-NEKCDVAA 108 (256)
T ss_dssp CCTTCEEEEETCTT-CHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHH-TTCTTTEEEEESCCTTCCC-SSCEEEEE
T ss_pred CCCCCEEEEECCCC-CHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHh-cCCCcceEEEECChHhCCc-CCCCCEEE
Confidence 36789999999996 66667788764 88999999999999999999988 7888899999999999876 56899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...... ...+..++++++++.|||||.+++.+
T Consensus 109 ~~~~~~-~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 109 CVGATW-IAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EESCGG-GTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred ECCChH-hcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 644321 12367889999999999999999865
No 20
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.60 E-value=1.6e-14 Score=127.18 Aligned_cols=109 Identities=10% Similarity=0.108 Sum_probs=89.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCC----CeEEEEccccccCcCCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLST----RMFFHTTDIMNVSSALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~----ri~f~~gDa~~l~~~l~~fD 195 (318)
.++.+|||||||+ |..+..++++ .+.++|+|+|+|+++++.|++.+.. .+++. +++|+++|+...+...++||
T Consensus 28 ~~~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 104 (217)
T 3jwh_A 28 SNARRVIDLGCGQ-GNLLKILLKD-SFFEQITGVDVSYRSLEIAQERLDR-LRLPRNQWERLQLIQGALTYQDKRFHGYD 104 (217)
T ss_dssp TTCCEEEEETCTT-CHHHHHHHHC-TTCSEEEEEESCHHHHHHHHHHHTT-CCCCHHHHTTEEEEECCTTSCCGGGCSCS
T ss_pred cCCCEEEEeCCCC-CHHHHHHHhh-CCCCEEEEEECCHHHHHHHHHHHHH-hcCCcccCcceEEEeCCcccccccCCCcC
Confidence 5788999999996 5555677764 3568999999999999999999887 67765 89999999987765556899
Q ss_pred EEEecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+....+ .++.++..++++++.+.|||||++++..
T Consensus 105 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 105 AATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 99965544 5565667899999999999999877655
No 21
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.60 E-value=7.2e-15 Score=126.12 Aligned_cols=108 Identities=10% Similarity=0.051 Sum_probs=85.8
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc-CCCCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS-ALKDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~-~l~~fD~V 197 (318)
..++.+|||||||+ |..++.+|++ +.+|+|+|+|+++++.|++.++. .|+ .+++|+++|..+++. ..++||+|
T Consensus 20 ~~~~~~vLDiGcG~-G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~-~~~-~~v~~~~~~~~~l~~~~~~~fD~v 93 (185)
T 3mti_A 20 LDDESIVVDATMGN-GNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSD-LGI-ENTELILDGHENLDHYVREPIRAA 93 (185)
T ss_dssp CCTTCEEEESCCTT-SHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHH-HTC-CCEEEEESCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEEcCCC-CHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHH-cCC-CcEEEEeCcHHHHHhhccCCcCEE
Confidence 36789999999996 6666788873 89999999999999999999987 777 889999988887542 23479999
Q ss_pred Eec-cccCC-------ChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 198 FLA-ALVGM-------DKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 198 ~~a-alvgm-------~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
++. ..+.. ......++++++.+.|||||++++-..
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 865 22221 235677899999999999999988653
No 22
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.59 E-value=1.8e-15 Score=134.50 Aligned_cols=108 Identities=11% Similarity=0.166 Sum_probs=87.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC------CC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL------KD 193 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l------~~ 193 (318)
.++++|||||||+ |..++.+|+.+.++++|++||+|+++++.|++.++. .|+.++++|+++|+.+....+ +.
T Consensus 57 ~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 57 YSPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNF-AGLQDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp HCCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HTCGGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred cCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHH-cCCCCceEEEECCHHHHHHHHHHhcCCCc
Confidence 5789999999995 788889997544589999999999999999999998 888889999999997632222 47
Q ss_pred ccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 194 YEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 194 fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
||+||+++... ...+..++++.+ +.|||||+|++.+
T Consensus 135 fD~V~~d~~~~-~~~~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 135 LDMVFLDHWKD-RYLPDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp CSEEEECSCGG-GHHHHHHHHHHT-TCCCTTCEEEESC
T ss_pred eEEEEEcCCcc-cchHHHHHHHhc-cccCCCeEEEEeC
Confidence 99999887332 123444677777 9999999999977
No 23
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.58 E-value=1.1e-14 Score=130.79 Aligned_cols=106 Identities=16% Similarity=0.122 Sum_probs=90.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+++.. +.+|+|+|+|+.+++.|++.+.. .|+.++++|+++|+.+++...++||+|+.
T Consensus 45 ~~~~~vLDiG~G~-G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 120 (257)
T 3f4k_A 45 TDDAKIADIGCGT-GGQTLFLADYV--KGQITGIDLFPDFIEIFNENAVK-ANCADRVKGITGSMDNLPFQNEELDLIWS 120 (257)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHHHC--CSEEEEEESCHHHHHHHHHHHHH-TTCTTTEEEEECCTTSCSSCTTCEEEEEE
T ss_pred CCCCeEEEeCCCC-CHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHH-cCCCCceEEEECChhhCCCCCCCEEEEEe
Confidence 5778999999996 66677888764 35999999999999999999998 89989999999999998877679999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+..- +..++++++.+.|||||.+++.+
T Consensus 121 ~~~l~~~--~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 121 EGAIYNI--GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp ESCSCCC--CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cChHhhc--CHHHHHHHHHHHcCCCcEEEEEE
Confidence 6544321 57789999999999999999876
No 24
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.58 E-value=1.8e-14 Score=134.54 Aligned_cols=105 Identities=3% Similarity=0.015 Sum_probs=90.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+|+++ +++|+|+|+|+++++.|++.++. .|+..+++|+++|+.+++...+.||+|+.
T Consensus 116 ~~~~~vLDiGcG~-G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~V~~ 191 (312)
T 3vc1_A 116 GPDDTLVDAGCGR-GGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARE-LRIDDHVRSRVCNMLDTPFDKGAVTASWN 191 (312)
T ss_dssp CTTCEEEEESCTT-SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHH-TTCTTTEEEEECCTTSCCCCTTCEEEEEE
T ss_pred CCCCEEEEecCCC-CHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHH-cCCCCceEEEECChhcCCCCCCCEeEEEE
Confidence 5678999999996 55567788764 88999999999999999999998 88888999999999998876679999986
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .+ +..++++++.+.|||||++++..
T Consensus 192 ~~~l~~~---~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 192 NESTMYV---DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp ESCGGGS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCchhhC---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 5433 33 38899999999999999998866
No 25
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=7.1e-15 Score=130.99 Aligned_cols=106 Identities=14% Similarity=0.149 Sum_probs=88.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||. |..+..+++ ++.+|+|+|+|+.+++.|++.... .+...+++|+++|+.+++. ...||+|+.
T Consensus 65 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~-~~~fD~v~~ 138 (235)
T 3lcc_A 65 LPLGRALVPGCGG-GHDVVAMAS---PERFVVGLDISESALAKANETYGS-SPKAEYFSFVKEDVFTWRP-TELFDLIFD 138 (235)
T ss_dssp SCCEEEEEETCTT-CHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTT-SGGGGGEEEECCCTTTCCC-SSCEEEEEE
T ss_pred CCCCCEEEeCCCC-CHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhc-cCCCcceEEEECchhcCCC-CCCeeEEEE
Confidence 4556999999996 566667775 699999999999999999999887 6667899999999999763 348999996
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++.++..++++++.+.|||||.+++..
T Consensus 139 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 139 YVFFCAIEPEMRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp ESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 5533 5566789999999999999999998855
No 26
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.57 E-value=1.4e-14 Score=133.50 Aligned_cols=106 Identities=13% Similarity=0.244 Sum_probs=90.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||. |..+..+++.+ |++|+|+|+|+.+++.|++..+. .|+..+++|+++|+.+++...++||+|+.
T Consensus 81 ~~~~~vLDiGcG~-G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 156 (297)
T 2o57_A 81 QRQAKGLDLGAGY-GGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQ-AGLADNITVKYGSFLEIPCEDNSYDFIWS 156 (297)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHH-HTCTTTEEEEECCTTSCSSCTTCEEEEEE
T ss_pred CCCCEEEEeCCCC-CHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHh-cCCCcceEEEEcCcccCCCCCCCEeEEEe
Confidence 6788999999996 56666788754 78999999999999999999887 78888999999999999877779999996
Q ss_pred ccc-cCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AAL-VGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aal-vgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
... .++ .++.+++++++++|||||.+++.+
T Consensus 157 ~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 157 QDAFLHS--PDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp ESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhc--CCHHHHHHHHHHHcCCCeEEEEEE
Confidence 543 343 457899999999999999998876
No 27
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.57 E-value=1.3e-14 Score=131.98 Aligned_cols=106 Identities=16% Similarity=0.112 Sum_probs=91.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+|+. ++++|+|+|+|+.+++.|++.++. .|+..+++|+++|+.+++...++||+|+.
T Consensus 45 ~~~~~vLDiGcG~-G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~i~~ 120 (267)
T 3kkz_A 45 TEKSLIADIGCGT-GGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQ-SGLQNRVTGIVGSMDDLPFRNEELDLIWS 120 (267)
T ss_dssp CTTCEEEEETCTT-CHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHH-TTCTTTEEEEECCTTSCCCCTTCEEEEEE
T ss_pred CCCCEEEEeCCCC-CHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHH-cCCCcCcEEEEcChhhCCCCCCCEEEEEE
Confidence 6789999999996 6666778864 688999999999999999999998 88989999999999998866679999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+.. . +..++++++.+.|||||.+++.+
T Consensus 121 ~~~~~~-~-~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 121 EGAIYN-I-GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp SSCGGG-T-CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCcee-c-CHHHHHHHHHHHcCCCCEEEEEE
Confidence 654421 1 56889999999999999998876
No 28
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.57 E-value=2.1e-14 Score=128.90 Aligned_cols=106 Identities=16% Similarity=0.267 Sum_probs=90.9
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..+..+++++ +++|+|+|+|+++++.|++.... . .+++|+++|+.+++...++||+|+
T Consensus 53 ~~~~~~vLdiG~G~-G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~-~---~~~~~~~~d~~~~~~~~~~fD~v~ 125 (266)
T 3ujc_A 53 LNENSKVLDIGSGL-GGGCMYINEKY--GAHTHGIDICSNIVNMANERVSG-N---NKIIFEANDILTKEFPENNFDLIY 125 (266)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCS-C---TTEEEEECCTTTCCCCTTCEEEEE
T ss_pred CCCCCEEEEECCCC-CHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhc-C---CCeEEEECccccCCCCCCcEEEEe
Confidence 36788999999995 66667788764 89999999999999999998876 2 789999999999877777999999
Q ss_pred ecc-ccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAA-LVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aa-lvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
... +.+++..+..++++++++.|||||.+++.+
T Consensus 126 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 126 SRDAILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 764 335566899999999999999999999876
No 29
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.56 E-value=5.4e-15 Score=129.98 Aligned_cols=106 Identities=19% Similarity=0.256 Sum_probs=90.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc-CcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV-SSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l-~~~l~~fD~V~ 198 (318)
.++++||||||| .|..++.+|+.+.++++|+++|+|+++++.|++.++. .|+.++++|+++|+.+. +...+ ||+||
T Consensus 55 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~-fD~v~ 131 (210)
T 3c3p_A 55 KQPQLVVVPGDG-LGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHD-NGLIDRVELQVGDPLGIAAGQRD-IDILF 131 (210)
T ss_dssp HCCSEEEEESCG-GGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HSGGGGEEEEESCHHHHHTTCCS-EEEEE
T ss_pred hCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-CCCCceEEEEEecHHHHhccCCC-CCEEE
Confidence 467899999999 5888889997542389999999999999999999987 78878999999999875 43334 99999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+++ +......+++++.+.|||||++++.+.
T Consensus 132 ~~~----~~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 132 MDC----DVFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp EET----TTSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred EcC----ChhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 886 345778999999999999999999763
No 30
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.56 E-value=2e-14 Score=133.18 Aligned_cols=107 Identities=7% Similarity=0.027 Sum_probs=90.1
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC-CCCCCeEEEEccccccCcCC------
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP-DLSTRMFFHTTDIMNVSSAL------ 191 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~-gl~~ri~f~~gDa~~l~~~l------ 191 (318)
..++.+|||||||+ |..+..+|+.+.++.+|+|+|+|+.+++.|++.++. . +...+++|+++|+.+++...
T Consensus 34 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~~ 111 (299)
T 3g5t_A 34 DGERKLLVDVGCGP-GTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEG-SPDTYKNVSFKISSSDDFKFLGADSVDK 111 (299)
T ss_dssp CSCCSEEEEETCTT-THHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHH-CC-CCTTEEEEECCTTCCGGGCTTTTTS
T ss_pred cCCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHh-ccCCCCceEEEEcCHHhCCccccccccC
Confidence 36889999999996 666678886543799999999999999999999887 4 56789999999999987665
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
++||+|+....++.- +..++++++.+.|||||.|++
T Consensus 112 ~~fD~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 112 QKIDMITAVECAHWF--DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SCEEEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh--CHHHHHHHHHHhcCCCcEEEE
Confidence 689999976544322 788999999999999999988
No 31
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.56 E-value=3.7e-14 Score=123.93 Aligned_cols=105 Identities=12% Similarity=0.039 Sum_probs=89.6
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..++.+|+. .++.+|+++|+|+++++.|++.++. .|+ ++++++++|+.+.......||+|+
T Consensus 38 ~~~~~~vLDiG~G~-G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~-~~~-~~v~~~~~d~~~~~~~~~~~D~i~ 113 (204)
T 3e05_A 38 LQDDLVMWDIGAGS-ASVSIEASNL-MPNGRIFALERNPQYLGFIRDNLKK-FVA-RNVTLVEAFAPEGLDDLPDPDRVF 113 (204)
T ss_dssp CCTTCEEEEETCTT-CHHHHHHHHH-CTTSEEEEEECCHHHHHHHHHHHHH-HTC-TTEEEEECCTTTTCTTSCCCSEEE
T ss_pred CCCCCEEEEECCCC-CHHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHH-hCC-CcEEEEeCChhhhhhcCCCCCEEE
Confidence 46789999999996 6667788876 4789999999999999999999987 777 789999999987655557899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..... .+..++++++.+.|||||++++..
T Consensus 114 ~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 114 IGGSG----GMLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp ESCCT----TCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred ECCCC----cCHHHHHHHHHHhcCCCeEEEEEe
Confidence 87633 367789999999999999999865
No 32
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.56 E-value=2e-14 Score=125.03 Aligned_cols=106 Identities=14% Similarity=0.156 Sum_probs=88.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||++..+...+++ +|.+|+|+|+|+++++.|++.+.. .+ .+++++++|+.+++...+.||+|+.
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~---~~~~v~~vD~s~~~~~~a~~~~~~-~~--~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE---DGYKTYGIEISDLQLKKAENFSRE-NN--FKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH---TTCEEEEEECCHHHHHHHHHHHHH-HT--CCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHh-cC--CceEEEECchhhCCCCCCceeEEEE
Confidence 57899999999975555555554 588999999999999999998876 33 5799999999998766678999997
Q ss_pred cc-ccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AA-LVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aa-lvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.. +.+++.++..++++++++.|||||.+++..
T Consensus 96 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 96 YGTIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 54 335566788999999999999999999876
No 33
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.56 E-value=5.4e-14 Score=128.88 Aligned_cols=106 Identities=6% Similarity=0.026 Sum_probs=89.8
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..++.+|+++ |++|+|+|+|+++++.|++.+.. .|+..+++|+.+|+.+++ ++||+|+
T Consensus 62 ~~~~~~vLDiGcG~-G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~---~~fD~v~ 134 (287)
T 1kpg_A 62 LQPGMTLLDVGCGW-GATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVAN-SENLRSKRVLLAGWEQFD---EPVDRIV 134 (287)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHT-CCCCSCEEEEESCGGGCC---CCCSEEE
T ss_pred CCCcCEEEEECCcc-cHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHh-cCCCCCeEEEECChhhCC---CCeeEEE
Confidence 36778999999996 55566788654 77999999999999999999988 888889999999998876 6899998
Q ss_pred ecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....+ +++.++..++++++++.|||||.+++..
T Consensus 135 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 135 SIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 65433 4444678999999999999999999866
No 34
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.56 E-value=1.6e-14 Score=132.60 Aligned_cols=107 Identities=17% Similarity=0.184 Sum_probs=89.2
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC-cCCCCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS-SALKDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~-~~l~~fD~V 197 (318)
..++.+|||||||+ |..+..+++. |++|+|+|+|+++++.|++.+.. .|+..+++|+++|+.+++ ...++||+|
T Consensus 66 ~~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~fD~v 140 (285)
T 4htf_A 66 GPQKLRVLDAGGGE-GQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEA-KGVSDNMQFIHCAAQDVASHLETPVDLI 140 (285)
T ss_dssp CSSCCEEEEETCTT-CHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC--CCGGGEEEEESCGGGTGGGCSSCEEEE
T ss_pred CCCCCEEEEeCCcc-hHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHh-cCCCcceEEEEcCHHHhhhhcCCCceEE
Confidence 35578999999996 6666778873 88999999999999999999998 888889999999999987 455689999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+....+.. ..+..++++++++.|||||.+++..
T Consensus 141 ~~~~~l~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 141 LFHAVLEW-VADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp EEESCGGG-CSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECchhhc-ccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 97654421 2466889999999999999998865
No 35
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.56 E-value=5.5e-15 Score=132.97 Aligned_cols=107 Identities=14% Similarity=0.221 Sum_probs=91.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc----CcCC--CC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV----SSAL--KD 193 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l----~~~l--~~ 193 (318)
.++++||+|||| .|.+++.+|+.+.++++|+++|+|+++++.|++.++. .|+.++++|+++|+.+. +... +.
T Consensus 71 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~-~g~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 71 TGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQK-AGVAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp HTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-HTCGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred cCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 467899999999 6899999998653388999999999999999999988 78888999999998653 2222 58
Q ss_pred ccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 194 YEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 194 fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
||+||+++ +.....++++++.+.|+|||++++.+.
T Consensus 149 fD~V~~d~----~~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 149 FDLIFIDA----DKRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEEEEECS----CGGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred cCEEEECC----CHHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 99999887 357888999999999999999999873
No 36
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.55 E-value=1.7e-14 Score=133.67 Aligned_cols=108 Identities=10% Similarity=0.126 Sum_probs=88.0
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCC--CCeEEEEccccccCcCCCCccE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLS--TRMFFHTTDIMNVSSALKDYEV 196 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~--~ri~f~~gDa~~l~~~l~~fD~ 196 (318)
...+.+|||||||+ |..+..++++ |.+|+|+|+|+.+++.|++.+.. .+++ .+++|+++|+.+++. .+.||+
T Consensus 80 ~~~~~~vLDlGcG~-G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~v~~~~~d~~~~~~-~~~fD~ 153 (299)
T 3g2m_A 80 GPVSGPVLELAAGM-GRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAE-APADVRDRCTLVQGDMSAFAL-DKRFGT 153 (299)
T ss_dssp CCCCSCEEEETCTT-TTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHT-SCHHHHTTEEEEECBTTBCCC-SCCEEE
T ss_pred CCCCCcEEEEeccC-CHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhh-cccccccceEEEeCchhcCCc-CCCcCE
Confidence 35566999999996 5666778763 88999999999999999999887 4433 789999999999876 468998
Q ss_pred EEec-ccc-CCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 197 VFLA-ALV-GMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 197 V~~a-alv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|++. ... .++.++..++++++++.|||||+|++...
T Consensus 154 v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 154 VVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp EEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 8854 222 33556789999999999999999999763
No 37
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.55 E-value=1.2e-14 Score=128.95 Aligned_cols=107 Identities=13% Similarity=0.188 Sum_probs=90.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC------CC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL------KD 193 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l------~~ 193 (318)
.++++||+|||| .|.+++.+|+.+.++++|+++|+|+++++.|++.++. .|+..+++|+++|+.+....+ +.
T Consensus 68 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~g~~~~i~~~~~d~~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 68 IQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQ-AEAEHKIDLRLKPALETLDELLAAGEAGT 145 (229)
T ss_dssp TTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHH-TTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred cCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-CCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence 578999999999 5888899997543388999999999999999999998 888889999999997642221 58
Q ss_pred ccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 194 YEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 194 fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
||+||+++ +.....++++.+.+.|+|||++++.+.
T Consensus 146 ~D~v~~d~----~~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 146 FDVAVVDA----DKENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEEEECS----CSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred ccEEEECC----CHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 99999886 345778899999999999999999773
No 38
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.55 E-value=2.4e-14 Score=123.18 Aligned_cols=105 Identities=17% Similarity=0.268 Sum_probs=87.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++. |.+|+|+|+|+.+++.|++.+.. .++ .+++|+++|+.+++. .+.||+|+.
T Consensus 31 ~~~~~vLdiG~G~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~-~~~-~~~~~~~~d~~~~~~-~~~~D~v~~ 103 (199)
T 2xvm_A 31 VKPGKTLDLGCGN-GRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSI-ENL-DNLHTRVVDLNNLTF-DRQYDFILS 103 (199)
T ss_dssp SCSCEEEEETCTT-SHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH-HTC-TTEEEEECCGGGCCC-CCCEEEEEE
T ss_pred cCCCeEEEEcCCC-CHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHh-CCC-CCcEEEEcchhhCCC-CCCceEEEE
Confidence 5678999999996 6666778873 88999999999999999999876 555 469999999999876 568999987
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.... .++.++..++++++.+.|+|||.+++-+
T Consensus 104 ~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 104 TVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 6533 4456688999999999999999987654
No 39
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.54 E-value=1.2e-14 Score=135.28 Aligned_cols=110 Identities=16% Similarity=0.184 Sum_probs=92.2
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..++.+|....++++|+|+|+|+.+++.|++.+.. .|+.++++|+++|+.+++.+ +.||+|+
T Consensus 116 l~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~-~~fD~v~ 192 (305)
T 3ocj_A 116 LRPGCVVASVPCGW-MSELLALDYSACPGVQLVGIDYDPEALDGATRLAAG-HALAGQITLHRQDAWKLDTR-EGYDLLT 192 (305)
T ss_dssp CCTTCEEEETTCTT-CHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTT-STTGGGEEEEECCGGGCCCC-SCEEEEE
T ss_pred CCCCCEEEEecCCC-CHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHh-cCCCCceEEEECchhcCCcc-CCeEEEE
Confidence 47889999999995 666677753335899999999999999999999998 88888999999999998876 7999999
Q ss_pred ecc-ccCC-ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAA-LVGM-DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aa-lvgm-~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
... +.++ +.....++++++++.|||||.+++.+
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 755 3344 34455579999999999999999876
No 40
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.54 E-value=9.1e-14 Score=122.90 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=87.2
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..++.+|+. +.+|+|+|+|+++++.|++.++. .|+.++++|+++|+.+.......||+|+
T Consensus 53 ~~~~~~vLDlGcG~-G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~-~g~~~~v~~~~~d~~~~~~~~~~~D~v~ 127 (204)
T 3njr_A 53 PRRGELLWDIGGGS-GSVSVEWCLA---GGRAITIEPRADRIENIQKNIDT-YGLSPRMRAVQGTAPAALADLPLPEAVF 127 (204)
T ss_dssp CCTTCEEEEETCTT-CHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH-TTCTTTEEEEESCTTGGGTTSCCCSEEE
T ss_pred CCCCCEEEEecCCC-CHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHH-cCCCCCEEEEeCchhhhcccCCCCCEEE
Confidence 46789999999996 6677788873 89999999999999999999988 8887799999999998544556899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+... . +.. +++++.+.|||||++++...
T Consensus 128 ~~~~--~---~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 128 IGGG--G---SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp ECSC--C---CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred ECCc--c---cHH-HHHHHHHhcCCCcEEEEEec
Confidence 7762 2 334 99999999999999998763
No 41
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.54 E-value=1e-13 Score=119.85 Aligned_cols=109 Identities=9% Similarity=0.072 Sum_probs=88.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC--CCCccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA--LKDYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~--l~~fD~V 197 (318)
.++.+|||+|||++ ..++.++++ +..+|+|+|+|+++++.|++.++. .++ ++++|+++|+.+++.. .+.||+|
T Consensus 43 ~~~~~vLDlgcG~G-~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~-~~~-~~v~~~~~d~~~~~~~~~~~~fD~i 117 (189)
T 3p9n_A 43 LTGLAVLDLYAGSG-ALGLEALSR--GAASVLFVESDQRSAAVIARNIEA-LGL-SGATLRRGAVAAVVAAGTTSPVDLV 117 (189)
T ss_dssp CTTCEEEEETCTTC-HHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHH-HTC-SCEEEEESCHHHHHHHCCSSCCSEE
T ss_pred CCCCEEEEeCCCcC-HHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHH-cCC-CceEEEEccHHHHHhhccCCCccEE
Confidence 57899999999964 555556653 456899999999999999999988 677 7899999999986432 3589999
Q ss_pred EeccccCCChhHHHHHHHHHHH--hccCCeEEEEEcCC
Q 021008 198 FLAALVGMDKDEKIRVIDHLAK--YMAPGALLMLRSAH 233 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r--~LkpGg~lv~r~~~ 233 (318)
+.+...+...++..++++.+.+ .|+|||++++....
T Consensus 118 ~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 118 LADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 9875433334678899999999 99999999997643
No 42
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.54 E-value=1e-13 Score=128.44 Aligned_cols=106 Identities=7% Similarity=-0.023 Sum_probs=89.5
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..++.+|+++ |++|+|+|+|+++++.|++.+.. .|+.++++|+++|+.++ .+.||+|+
T Consensus 70 ~~~~~~vLDiGcG~-G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~---~~~fD~v~ 142 (302)
T 3hem_A 70 LEPGMTLLDIGCGW-GSTMRHAVAEY--DVNVIGLTLSENQYAHDKAMFDE-VDSPRRKEVRIQGWEEF---DEPVDRIV 142 (302)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHH-SCCSSCEEEEECCGGGC---CCCCSEEE
T ss_pred CCCcCEEEEeeccC-cHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHh-cCCCCceEEEECCHHHc---CCCccEEE
Confidence 36788999999996 56667788764 69999999999999999999998 88988999999999887 45899998
Q ss_pred ecccc-CC-------ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALV-GM-------DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalv-gm-------~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....+ ++ ..+...++++++.+.|||||++++..
T Consensus 143 ~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 143 SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 65433 44 22567899999999999999999876
No 43
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.54 E-value=1.7e-14 Score=130.39 Aligned_cols=104 Identities=9% Similarity=0.094 Sum_probs=86.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..++++ +.+|+|+|+|+++++.|++.+.. .|+ .+++|+++|+.++++..++||+|+.
T Consensus 36 ~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~-~~~-~~v~~~~~d~~~l~~~~~~fD~V~~ 109 (260)
T 1vl5_A 36 KGNEEVLDVATGG-GHVANAFAPF---VKKVVAFDLTEDILKVARAFIEG-NGH-QQVEYVQGDAEQMPFTDERFHIVTC 109 (260)
T ss_dssp CSCCEEEEETCTT-CHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHH-TTC-CSEEEEECCC-CCCSCTTCEEEEEE
T ss_pred CCCCEEEEEeCCC-CHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHh-cCC-CceEEEEecHHhCCCCCCCEEEEEE
Confidence 6789999999996 5666677764 45999999999999999999887 666 4799999999998877779999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ ++ .+..++++++++.|||||.|++.+
T Consensus 110 ~~~l~~~--~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 110 RIAAHHF--PNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp ESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhHhc--CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 6433 43 467799999999999999998864
No 44
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.53 E-value=1.6e-13 Score=127.95 Aligned_cols=105 Identities=8% Similarity=0.019 Sum_probs=90.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+++.+ |++|+|+|+|+++++.|++.+.. .|+..+++|+++|+.+++ ++||+|+.
T Consensus 89 ~~~~~vLDiGcG~-G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~---~~fD~v~~ 161 (318)
T 2fk8_A 89 KPGMTLLDIGCGW-GTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLAS-IDTNRSRQVLLQGWEDFA---EPVDRIVS 161 (318)
T ss_dssp CTTCEEEEESCTT-SHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHT-SCCSSCEEEEESCGGGCC---CCCSEEEE
T ss_pred CCcCEEEEEcccc-hHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHh-cCCCCceEEEECChHHCC---CCcCEEEE
Confidence 6778999999997 56667788764 88999999999999999999988 788889999999998875 58999986
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ +++.++..++++++.+.|||||++++..
T Consensus 162 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 162 IEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp ESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred eChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5433 4455788999999999999999999866
No 45
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.53 E-value=6.6e-14 Score=121.26 Aligned_cols=112 Identities=11% Similarity=0.063 Sum_probs=90.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc-CCCCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS-ALKDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~-~l~~fD~V 197 (318)
..++.+|||+|||+ |..++.+++++.++++|+|+|+|+++++.|++.++. .|+..+++|+++|+.+++. ..++||+|
T Consensus 20 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 20 VKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD-LNLIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHH-TTCGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCCeEEEECCHHHHhhhccCCceEE
Confidence 36788999999996 566677887654668999999999999999999998 7888899999999988763 33589999
Q ss_pred Eecccc-C-------CChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 198 FLAALV-G-------MDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 198 ~~aalv-g-------m~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+..... . ....+..++++++.+.|||||++++...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 865421 1 1234567899999999999999988753
No 46
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.53 E-value=2.8e-14 Score=129.94 Aligned_cols=108 Identities=17% Similarity=0.260 Sum_probs=90.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++. .|+.+|+|+|+|+.+++.|++.+.. .|+ .+++|+++|+.+++...++||+|+.
T Consensus 36 ~~~~~vLDiG~G~-G~~~~~l~~~-~~~~~v~~vD~s~~~~~~a~~~~~~-~~~-~~~~~~~~d~~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 36 PPGAKVLEAGCGI-GAQTVILAKN-NPDAEITSIDISPESLEKARENTEK-NGI-KNVKFLQANIFSLPFEDSSFDHIFV 111 (276)
T ss_dssp CTTCEEEETTCTT-SHHHHHHHHH-CTTSEEEEEESCHHHHHHHHHHHHH-TTC-CSEEEEECCGGGCCSCTTCEEEEEE
T ss_pred CCCCeEEEecCCC-CHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHH-cCC-CCcEEEEcccccCCCCCCCeeEEEE
Confidence 6789999999996 5556677776 4899999999999999999999887 666 4799999999998877779999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
...+. ...+..++++++.+.|||||.+++.+.
T Consensus 112 ~~~l~-~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 112 CFVLE-HLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp ESCGG-GCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred echhh-hcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 65442 124566899999999999999998763
No 47
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.53 E-value=1e-13 Score=117.30 Aligned_cols=104 Identities=15% Similarity=0.136 Sum_probs=85.5
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc-cCcCCCCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN-VSSALKDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~-l~~~l~~fD~V 197 (318)
..++.+|||||||+ |..++.+|+.+ ++++|+++|+|+++++.|++.+.. .|+..++ ++++|+.+ ++...+.||+|
T Consensus 23 ~~~~~~vldiG~G~-G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~-~~~~d~~~~~~~~~~~~D~i 98 (178)
T 3hm2_A 23 PKPHETLWDIGGGS-GSIAIEWLRST-PQTTAVCFEISEERRERILSNAIN-LGVSDRI-AVQQGAPRAFDDVPDNPDVI 98 (178)
T ss_dssp CCTTEEEEEESTTT-THHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHT-TTCTTSE-EEECCTTGGGGGCCSCCSEE
T ss_pred ccCCCeEEEeCCCC-CHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHH-hCCCCCE-EEecchHhhhhccCCCCCEE
Confidence 36778999999996 66777788754 899999999999999999999988 8887789 88999865 33322689999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
++....+. .++++++.+.|+|||.+++..
T Consensus 99 ~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 99 FIGGGLTA-----PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp EECC-TTC-----TTHHHHHHHTCCTTCEEEEEE
T ss_pred EECCcccH-----HHHHHHHHHhcCCCCEEEEEe
Confidence 97764431 679999999999999999866
No 48
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.52 E-value=7.9e-14 Score=125.35 Aligned_cols=102 Identities=11% Similarity=0.071 Sum_probs=84.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
.++.+|||||||+ |..+..+++. +. +|+|+|+|+++++.|++... ..+++|+++|+.+++...++||+|+
T Consensus 43 ~~~~~vLD~GcG~-G~~~~~l~~~---~~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v~ 113 (253)
T 3g5l_A 43 FNQKTVLDLGCGF-GWHCIYAAEH---GAKKVLGIDLSERMLTEAKRKTT-----SPVVCYEQKAIEDIAIEPDAYNVVL 113 (253)
T ss_dssp CTTCEEEEETCTT-CHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHCC-----CTTEEEEECCGGGCCCCTTCEEEEE
T ss_pred cCCCEEEEECCCC-CHHHHHHHHc---CCCEEEEEECCHHHHHHHHHhhc-----cCCeEEEEcchhhCCCCCCCeEEEE
Confidence 4789999999996 5566677764 44 99999999999999998765 3789999999999887667999999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....+. ..++..++++++++.|||||.+++..
T Consensus 114 ~~~~l~-~~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 114 SSLALH-YIASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EESCGG-GCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Echhhh-hhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 765442 12577899999999999999999864
No 49
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.52 E-value=7.8e-14 Score=122.29 Aligned_cols=103 Identities=20% Similarity=0.265 Sum_probs=84.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++. +.+|+|+|+|+++++.|++.... . .+++|+++|+.+++ ..++||+|+.
T Consensus 50 ~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~-~---~~~~~~~~d~~~~~-~~~~fD~v~~ 120 (216)
T 3ofk_A 50 GAVSNGLEIGCAA-GAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKR-W---SHISWAATDILQFS-TAELFDLIVV 120 (216)
T ss_dssp SSEEEEEEECCTT-SHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTT-C---SSEEEEECCTTTCC-CSCCEEEEEE
T ss_pred CCCCcEEEEcCCC-CHHHHHHHHc---CCEEEEEECCHHHHHHHHHhccc-C---CCeEEEEcchhhCC-CCCCccEEEE
Confidence 5678999999996 5555677763 68999999999999999998876 2 38999999999987 4568999997
Q ss_pred cccc-CCC-hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMD-KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~-~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ +++ .+...++++++++.|||||.+++..
T Consensus 121 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 121 AEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp ESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 6533 443 3556789999999999999999865
No 50
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.52 E-value=1.7e-13 Score=120.22 Aligned_cols=101 Identities=10% Similarity=0.111 Sum_probs=84.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..++++ +++|+|+|+|+.+++.|++... .+++|+++|+.+++.. ++||+|+.
T Consensus 44 ~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~d~~~~~~~-~~fD~v~~ 112 (220)
T 3hnr_A 44 KSFGNVLEFGVGT-GNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP------KEFSITEGDFLSFEVP-TSIDTIVS 112 (220)
T ss_dssp TCCSEEEEECCTT-SHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC------TTCCEESCCSSSCCCC-SCCSEEEE
T ss_pred cCCCeEEEeCCCC-CHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC------CceEEEeCChhhcCCC-CCeEEEEE
Confidence 5788999999996 5666677763 8899999999999999988754 5789999999998776 89999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++..++.++++++++.|||||.+++.+
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 6544 4455566669999999999999999875
No 51
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.52 E-value=3e-14 Score=128.28 Aligned_cols=103 Identities=13% Similarity=0.095 Sum_probs=87.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC---CCCccE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA---LKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~---l~~fD~ 196 (318)
.++.+|||||||+ |..++.+|+. .++++|+|||+|+++++.|++.++. .|+. +++|+++|+.+++.. .+.||+
T Consensus 69 ~~~~~vLDiG~G~-G~~~~~la~~-~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~-~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAGA-GFPSLPIKIC-FPHLHVTIVDSLNKRITFLEKLSEA-LQLE-NTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSSS-CTTHHHHHHH-CTTCEEEEEESCHHHHHHHHHHHHH-HTCS-SEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCCEEEEecCCC-CHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHH-cCCC-CEEEEeccHHHhcccccccCCccE
Confidence 4678999999995 7777888864 3789999999999999999999988 6774 599999999988643 358999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+..++ .+..++++.+.+.|+|||.+++-.
T Consensus 145 V~~~~~-----~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 145 VTARAV-----ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEEECC-----SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEecc-----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 998763 357889999999999999998854
No 52
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.51 E-value=5.4e-14 Score=125.91 Aligned_cols=107 Identities=7% Similarity=0.049 Sum_probs=85.6
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc--CcCCCCccE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV--SSALKDYEV 196 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l--~~~l~~fD~ 196 (318)
..++.+|||||||+ |..+..+++. ...+|+|+|+|+++++.|++..+. .+ .+++|+++|+.++ +...++||+
T Consensus 58 ~~~~~~vLDiGcGt-G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~-~~--~~v~~~~~d~~~~~~~~~~~~fD~ 131 (236)
T 1zx0_A 58 SSKGGRVLEVGFGM-AIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPR-QT--HKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTTCEEEEEECCTT-SHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGG-CS--SEEEEEESCHHHHGGGSCTTCEEE
T ss_pred CCCCCeEEEEeccC-CHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHh-cC--CCeEEEecCHHHhhcccCCCceEE
Confidence 36788999999996 5666677752 345999999999999999998887 44 7899999999988 666678999
Q ss_pred EEecccc----CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALV----GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalv----gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+.+.+. ......+..++++++++|||||++++-+
T Consensus 132 V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 9872211 1134567789999999999999999866
No 53
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.51 E-value=3.6e-14 Score=126.64 Aligned_cols=105 Identities=20% Similarity=0.291 Sum_probs=89.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc-CcC--CCCccE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV-SSA--LKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l-~~~--l~~fD~ 196 (318)
.++.+||+||||+ |..++.+|+.+ |+.+|+++|+|+++++.|++.+.. .|+..+++|+.+|+.+. +.. .+.||+
T Consensus 53 ~~~~~vLdiG~G~-G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (233)
T 2gpy_A 53 AAPARILEIGTAI-GYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKA-LGLESRIELLFGDALQLGEKLELYPLFDV 129 (233)
T ss_dssp HCCSEEEEECCTT-SHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHH-TTCTTTEEEECSCGGGSHHHHTTSCCEEE
T ss_pred cCCCEEEEecCCC-cHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEECCHHHHHHhcccCCCccE
Confidence 5778999999995 77778888764 789999999999999999999998 88888999999999874 322 358999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|++++. .....++++.+.+.|+|||++++.+
T Consensus 130 I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 130 LFIDAA----KGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEGG----GSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 998773 2467889999999999999999976
No 54
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.51 E-value=2.7e-13 Score=121.56 Aligned_cols=104 Identities=13% Similarity=0.251 Sum_probs=85.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+++. |.+|+|+|+|+++++.|++.... .+ .+++|+++|+.+++.. ++||+|++
T Consensus 40 ~~~~~vLDlGcG~-G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~-~~--~~v~~~~~d~~~~~~~-~~fD~v~~ 111 (252)
T 1wzn_A 40 REVRRVLDLACGT-GIPTLELAER---GYEVVGLDLHEEMLRVARRKAKE-RN--LKIEFLQGDVLEIAFK-NEFDAVTM 111 (252)
T ss_dssp SCCCEEEEETCTT-CHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH-TT--CCCEEEESCGGGCCCC-SCEEEEEE
T ss_pred cCCCEEEEeCCCC-CHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHh-cC--CceEEEECChhhcccC-CCccEEEE
Confidence 5678999999996 5555677763 88999999999999999999887 44 3799999999987644 58999985
Q ss_pred c--cccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 A--ALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 a--alvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
. .+..++.++..++++++++.|+|||.+++..
T Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 112 FFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp CSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 3 3333456788899999999999999998754
No 55
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.51 E-value=3.8e-14 Score=127.32 Aligned_cols=106 Identities=18% Similarity=0.207 Sum_probs=89.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC---------
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA--------- 190 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~--------- 190 (318)
.++++||+||||. |..++.+|+.+.++++|+++|+|+++++.|++.++. .|+..+++|+++|+.+....
T Consensus 59 ~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 59 SGAKRIIEIGTFT-GYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKE-NGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp HTCSEEEEECCTT-CHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH-TTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred hCcCEEEEEeCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 5788999999995 788888998653388999999999999999999988 78878899999999763111
Q ss_pred -------C-CCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 191 -------L-KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 191 -------l-~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
. +.||+||+++ ......++++.+.+.|+|||++++.+
T Consensus 137 ~~~~f~~~~~~fD~I~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDA----DKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeC----CHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 5799999876 34677789999999999999999976
No 56
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.51 E-value=5.2e-14 Score=130.89 Aligned_cols=109 Identities=16% Similarity=0.193 Sum_probs=84.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCC-------------------------
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLS------------------------- 174 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~------------------------- 174 (318)
.++++|||||||+ |..++.+|+++ ++.+|+|||+|+.+++.|++.+.. .+..
T Consensus 45 ~~~~~VLDiGCG~-G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (292)
T 3g07_A 45 FRGRDVLDLGCNV-GHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRH-YLSEELRLPPQTLEGDPGAEGEEGTTTVR 121 (292)
T ss_dssp TTTSEEEEESCTT-CHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC--------------------------------
T ss_pred cCCCcEEEeCCCC-CHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHh-hhhhhcccccccccccccccccccccccc
Confidence 3689999999996 66667888764 789999999999999999998775 4322
Q ss_pred --------------------------------CCeEEEEccccccC-----cCCCCccEEEecccc-CC----ChhHHHH
Q 021008 175 --------------------------------TRMFFHTTDIMNVS-----SALKDYEVVFLAALV-GM----DKDEKIR 212 (318)
Q Consensus 175 --------------------------------~ri~f~~gDa~~l~-----~~l~~fD~V~~aalv-gm----~~~~k~~ 212 (318)
.+++|+++|..+.+ ...+.||+|+..... ++ ..+...+
T Consensus 122 ~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~ 201 (292)
T 3g07_A 122 KRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKR 201 (292)
T ss_dssp --------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHH
Confidence 68999999998643 345689999976643 11 2357889
Q ss_pred HHHHHHHhccCCeEEEEEc
Q 021008 213 VIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 213 vl~~l~r~LkpGg~lv~r~ 231 (318)
++++++++|+|||.|++..
T Consensus 202 ~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 202 MFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHhCCCcEEEEec
Confidence 9999999999999999964
No 57
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.50 E-value=9e-14 Score=127.56 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=87.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||. |..++.+++. |.+|+|+|+|+.+++.|++.+.. .|+ +++|+++|+.+++. .+.||+|+.
T Consensus 119 ~~~~~vLD~GcG~-G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~-~~~--~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 119 ISPCKVLDLGCGQ-GRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEK-ENL--NISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp SCSCEEEEESCTT-CHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH-TTC--CEEEEECCGGGCCC-CSCEEEEEE
T ss_pred cCCCcEEEECCCC-CHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHH-cCC--ceEEEEeccccccc-cCCccEEEE
Confidence 5789999999996 5666778873 88999999999999999999987 565 89999999999765 568999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.... +++.+...++++++.+.|+|||.+++-.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 6533 4466778899999999999999976644
No 58
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.50 E-value=3.6e-14 Score=123.64 Aligned_cols=102 Identities=12% Similarity=0.074 Sum_probs=85.7
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
++.+|||||||+ |..++.+++.+ ++.+|+++|+|+.+++.|++.+.. .|+.. ++|+++|+.+.+ ..++||+|+..
T Consensus 65 ~~~~vLDiG~G~-G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~-v~~~~~d~~~~~-~~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGP-GLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHE-LKLEN-IEPVQSRVEEFP-SEPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTT-TTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHH-TTCSS-EEEEECCTTTSC-CCSCEEEEECS
T ss_pred CCCeEEEECCCC-CHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHH-cCCCC-eEEEecchhhCC-ccCCcCEEEEe
Confidence 478999999996 56667788754 899999999999999999999988 77754 999999999875 33589999966
Q ss_pred cccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 201 ALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 201 alvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
++ .+..++++.+.+.|+|||.+++..+
T Consensus 140 ~~-----~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 140 AF-----ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp CS-----SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred cc-----CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 53 3567899999999999999988753
No 59
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.50 E-value=5.9e-14 Score=125.87 Aligned_cols=109 Identities=14% Similarity=0.138 Sum_probs=87.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc-C--cCCCCccE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV-S--SALKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l-~--~~l~~fD~ 196 (318)
..+.+|||||||. |..++.+|+.+ |++.|+|||+++++++.|++.+.. .|+ .+++|+++|+.++ + ...++||.
T Consensus 33 ~~~~~vLDiGcG~-G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~-~~l-~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 33 REAPVTLEIGFGM-GASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHE-EGL-SNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp SCCCEEEEESCTT-CHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHH-TTC-SSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCCeEEEEeeeC-hHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHH-hCC-CcEEEEECCHHHHHHHHcCCCChhe
Confidence 5678999999995 77778888764 899999999999999999999987 777 4599999999885 2 34568999
Q ss_pred EEeccccCCCh-hH-H-----HHHHHHHHHhccCCeEEEEEcC
Q 021008 197 VFLAALVGMDK-DE-K-----IRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 197 V~~aalvgm~~-~~-k-----~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|++..-..+++ .. | ..++++++++|||||.|++...
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 98653233322 11 1 2599999999999999998774
No 60
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.50 E-value=1e-13 Score=126.89 Aligned_cols=103 Identities=11% Similarity=0.051 Sum_probs=87.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC---CCCccE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA---LKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~---l~~fD~ 196 (318)
.++.+|||||||+ |..++.+|..+ |+++|++||+|+++++.|+++++. .|+. +++|+++|+.+++.. .++||+
T Consensus 79 ~~~~~vLDiG~G~-G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~-~~l~-~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTGA-GFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEV-LGLK-GARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCTT-TTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHH-HTCS-SEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCCC-CHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH-hCCC-ceEEEECcHHHhhcccccCCCceE
Confidence 4678999999995 78888899764 899999999999999999999998 7885 499999999988653 258999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+..++ .+...+++.+.+.|||||++++-.
T Consensus 155 I~s~a~-----~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 155 AVARAV-----APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EEEESS-----CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEECCc-----CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 998764 245789999999999999988754
No 61
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.50 E-value=1.4e-13 Score=119.42 Aligned_cols=103 Identities=13% Similarity=0.164 Sum_probs=86.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++ +|||||||+ |..+..+++. |.+|+|+|+|+.+++.|++.... .+. +++|+++|+.+++...+.||+|+.
T Consensus 29 ~~~-~vLdiGcG~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~-~~~--~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 29 PQG-KILCLAEGE-GRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQE-KGV--KITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp CSS-EEEECCCSC-THHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHH-HTC--CEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CCC-CEEEECCCC-CHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHh-cCC--ceEEEEcChhhcCCCcCCccEEEE
Confidence 445 999999996 5666778763 78999999999999999999876 444 899999999998766668999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
. +..++.++..++++++.+.|+|||.+++..
T Consensus 101 ~-~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 101 I-FCHLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp E-CCCCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred E-hhcCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4 455566788999999999999999998876
No 62
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.50 E-value=2.4e-13 Score=119.92 Aligned_cols=109 Identities=14% Similarity=0.081 Sum_probs=87.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC--cCCCCccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS--SALKDYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~--~~l~~fD~V 197 (318)
.++.+|||||||. |..++.+|+.+ |+++|+|||+|+++++.|++.+.. .|+ .+++|+++|+.+++ ...+.||+|
T Consensus 40 ~~~~~vLDiGcG~-G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~-~~~-~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSGK-GAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLE-VGV-PNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCTT-SHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHH-HCC-SSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccCc-CHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHH-cCC-CCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 5678999999995 66667788764 899999999999999999999887 677 78999999999876 344589999
Q ss_pred EeccccCCCh--h-----HHHHHHHHHHHhccCCeEEEEEcC
Q 021008 198 FLAALVGMDK--D-----EKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 198 ~~aalvgm~~--~-----~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
++..-.++.+ . ...++++++.+.|+|||.+++...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 9764322211 0 125799999999999999998763
No 63
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.50 E-value=1.9e-13 Score=120.23 Aligned_cols=107 Identities=24% Similarity=0.336 Sum_probs=89.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCC----CCCeEEEEccccccCcCCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDL----STRMFFHTTDIMNVSSALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl----~~ri~f~~gDa~~l~~~l~~fD 195 (318)
.++.+|||||||+ |..++.+++. +++|+|+|+|+.+++.|++.... .++ ..+++|+++|+.+++...+.||
T Consensus 29 ~~~~~vLdiG~G~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 103 (235)
T 3sm3_A 29 QEDDEILDIGCGS-GKISLELASK---GYSVTGIDINSEAIRLAETAARS-PGLNQKTGGKAEFKVENASSLSFHDSSFD 103 (235)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTC-CSCCSSSSCEEEEEECCTTSCCSCTTCEE
T ss_pred CCCCeEEEECCCC-CHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHh-cCCccccCcceEEEEecccccCCCCCcee
Confidence 6789999999996 6666778863 88999999999999999999887 665 3479999999999887667999
Q ss_pred EEEecccc-CC-ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALV-GM-DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalv-gm-~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+....+ .+ +...+.++++++.+.|||||++++.+
T Consensus 104 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 104 FAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 99976544 44 34556699999999999999998875
No 64
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.50 E-value=1.7e-13 Score=121.72 Aligned_cols=109 Identities=11% Similarity=0.070 Sum_probs=86.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC--cCCCCccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS--SALKDYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~--~~l~~fD~V 197 (318)
.++.+|||||||+ |..++.+|+.+ |++.|+|||+|+++++.|++.+.. .|+ .+++|+++|+.+++ ...+.||.|
T Consensus 37 ~~~~~vLDiGcG~-G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~-~~~-~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 37 NDNPIHIEVGTGK-GQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKD-SEA-QNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp SCCCEEEEECCTT-SHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHH-SCC-SSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCCceEEEEecCC-CHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHH-cCC-CCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 5678999999996 66667888764 899999999999999999999887 676 57999999999865 344589998
Q ss_pred EeccccCCChh-------HHHHHHHHHHHhccCCeEEEEEcC
Q 021008 198 FLAALVGMDKD-------EKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 198 ~~aalvgm~~~-------~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
++..-..+.+. ...+++++++++|+|||.|++...
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 86432222211 136799999999999999998763
No 65
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.50 E-value=7.5e-14 Score=128.68 Aligned_cols=108 Identities=14% Similarity=0.144 Sum_probs=89.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+++.+..+++|+|+|+|+.+++.|++.+.. .+ .+++|+++|+.+++.+ ++||+|+.
T Consensus 21 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~--~~v~~~~~d~~~~~~~-~~fD~v~~ 95 (284)
T 3gu3_A 21 TKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL-LP--YDSEFLEGDATEIELN-DKYDIAIC 95 (284)
T ss_dssp CSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS-SS--SEEEEEESCTTTCCCS-SCEEEEEE
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh-cC--CceEEEEcchhhcCcC-CCeeEEEE
Confidence 6789999999996 666778887652269999999999999999999887 34 3899999999998763 58999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
...++ ...+..++++++++.|||||.+++.+.+
T Consensus 96 ~~~l~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 96 HAFLL-HMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ESCGG-GCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CChhh-cCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 66443 2256679999999999999999987654
No 66
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.49 E-value=2.4e-13 Score=130.18 Aligned_cols=107 Identities=11% Similarity=0.205 Sum_probs=91.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc--CcCCCCccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV--SSALKDYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l--~~~l~~fD~V 197 (318)
..+.+|||||||+ |..++.+++++ |+.+++++|+ |++++.|++.+.. .|+.++++|+.+|..+. |.. ++||+|
T Consensus 178 ~~~~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~p-~~~D~v 252 (363)
T 3dp7_A 178 HHPKRLLDIGGNT-GKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAG-LSGSERIHGHGANLLDRDVPFP-TGFDAV 252 (363)
T ss_dssp GCCSEEEEESCTT-CHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTT-CTTGGGEEEEECCCCSSSCCCC-CCCSEE
T ss_pred cCCCEEEEeCCCc-CHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHh-cCcccceEEEEccccccCCCCC-CCcCEE
Confidence 5779999999996 66677888775 8999999999 9999999999988 78888999999999874 223 589999
Q ss_pred Eecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
++...+ .++.++..++++++++.|||||+|++.+
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 253 WMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 976654 4566777899999999999999998866
No 67
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.49 E-value=4.3e-13 Score=124.29 Aligned_cols=108 Identities=19% Similarity=0.217 Sum_probs=83.8
Q ss_pred CCCCEEEEEccCC--ChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC---------
Q 021008 120 RFPTKIAFIGSGP--LPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS--------- 188 (318)
Q Consensus 120 ~~~~rVL~IGsGp--lp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~--------- 188 (318)
...++|||||||+ .|..+..+++. .|+++|++||+||.+++.|++++.. ..+++|+++|+.+..
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~ 150 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAK----DPNTAVFTADVRDPEYILNHPDVR 150 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTT----CTTEEEEECCTTCHHHHHHSHHHH
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCC----CCCeEEEEeeCCCchhhhccchhh
Confidence 3458999999995 04444445543 4899999999999999999998753 368999999997631
Q ss_pred --cCCCCccEEEecccc-CCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 189 --SALKDYEVVFLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 189 --~~l~~fD~V~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
.+..+||+|++...+ .++.++..++++++++.|+|||.|++...
T Consensus 151 ~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 151 RMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp HHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred ccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 233589999876544 44545688999999999999999998773
No 68
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.49 E-value=5.7e-13 Score=116.97 Aligned_cols=106 Identities=16% Similarity=0.130 Sum_probs=86.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||++ ..+..+++. +.+|+|+|+|+++++.|++.... .+ .+++|+++|+.+++...++||+|+.
T Consensus 37 ~~~~~vLDlG~G~G-~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~-~~--~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 37 KKRGKVLDLACGVG-GFSFLLEDY---GFEVVGVDISEDMIRKAREYAKS-RE--SNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp CSCCEEEEETCTTS-HHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH-TT--CCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEEeccCC-HHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHh-cC--CCceEEECchhcCCCCCCcEEEEEE
Confidence 45889999999975 555677764 45999999999999999999887 44 7899999999988755568999987
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
.... ..+..+..++++++++.|+|||.+++...
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 6531 23556788999999999999999988763
No 69
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.48 E-value=1.1e-13 Score=123.89 Aligned_cols=106 Identities=9% Similarity=0.149 Sum_probs=86.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
++.+|||||||+ |..+..++++. +.+|+|+|+|+.+++.|++.+.. .+ ..+++|+++|+.+++...+.||+|+..
T Consensus 79 ~~~~vLDiGcG~-G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~-~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGI-GRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGE-EG-KRVRNYFCCGLQDFTPEPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTT-THHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGG-GG-GGEEEEEECCGGGCCCCSSCEEEEEEE
T ss_pred CCCEEEEECCCC-CHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhh-cC-CceEEEEEcChhhcCCCCCCEEEEEEc
Confidence 589999999996 56666677642 67999999999999999999876 43 467999999999887666689999976
Q ss_pred ccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 201 ALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 201 alv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..+ .++.+...++++++.+.|||||.+++.+
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 533 4454556799999999999999999866
No 70
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.47 E-value=1.6e-13 Score=123.02 Aligned_cols=105 Identities=10% Similarity=0.146 Sum_probs=87.9
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..+..+++. +.+|+|+|+|+.+++.|++.+.. .|+ .+++|+++|+.+++...++||+|+
T Consensus 19 ~~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~-~~~-~~v~~~~~d~~~~~~~~~~fD~v~ 92 (239)
T 1xxl_A 19 CRAEHRVLDIGAGA-GHTALAFSPY---VQECIGVDATKEMVEVASSFAQE-KGV-ENVRFQQGTAESLPFPDDSFDIIT 92 (239)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHH-HTC-CSEEEEECBTTBCCSCTTCEEEEE
T ss_pred cCCCCEEEEEccCc-CHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHH-cCC-CCeEEEecccccCCCCCCcEEEEE
Confidence 47889999999996 6666778764 56999999999999999999877 565 479999999999887767999999
Q ss_pred ecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..... ++ .+..+++++++++|||||.+++.+
T Consensus 93 ~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 93 CRYAAHHF--SDVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCchhhc--cCHHHHHHHHHHHcCCCcEEEEEE
Confidence 76433 33 467889999999999999998865
No 71
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.47 E-value=5.4e-13 Score=121.84 Aligned_cols=109 Identities=12% Similarity=0.116 Sum_probs=89.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc-CCCCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS-ALKDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~-~l~~fD~V 197 (318)
..++.+|||||||++.++ ..+++. +..+|+|+|+|+.+++.|++.... .++..+++|+++|+.+++. ..+.||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~-~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDL-LKYERA--GIGEYYGVDIAEVSINDARVRARN-MKRRFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CCTTCEEEEETCTTTTTH-HHHHHH--TCSEEEEEESCHHHHHHHHHHHHT-SCCSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCCeEEEECCCCCHHH-HHHHHC--CCCEEEEEECCHHHHHHHHHHHHh-cCCCccEEEEECCccccccCCCCCcCEE
Confidence 367899999999975555 457764 355999999999999999999987 7777899999999998876 35589999
Q ss_pred EeccccC---CChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALVG---MDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalvg---m~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+....++ .+.++..++++++.+.|||||.+++..
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9764332 246788899999999999999999865
No 72
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=4.8e-13 Score=119.64 Aligned_cols=103 Identities=10% Similarity=0.013 Sum_probs=83.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC-----CCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL-----KDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l-----~~f 194 (318)
.++.+|||||||+ |..+..+|+. +.+|+|+|+|+.+++.|++.... .+++|+++|+.+++... ..|
T Consensus 55 ~~~~~vLD~GcG~-G~~~~~la~~---~~~v~gvD~s~~~~~~a~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGN-GTQTKFLSQF---FPRVIGLDVSKSALEIAAKENTA-----ANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTT-SHHHHHHHHH---SSCEEEEESCHHHHHHHHHHSCC-----TTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCC-CHHHHHHHHh---CCCEEEEECCHHHHHHHHHhCcc-----cCceEEECcccccccccccccccCc
Confidence 6778999999996 6666788875 44999999999999999988743 58999999999864322 148
Q ss_pred cEEEecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+|+..... .++.++..++++++++.|||||.+++.+
T Consensus 126 d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp CEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 999977655 4456688999999999999999987765
No 73
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.47 E-value=3.1e-13 Score=121.28 Aligned_cols=103 Identities=12% Similarity=0.109 Sum_probs=84.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..++++ +.+|+|+|+|+++++.|++.+.. ...+++|+++|+.+++...++||+|+.
T Consensus 38 ~~~~~vLDiG~G~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~~~d~~~~~~~~~~fD~v~~ 110 (263)
T 2yqz_A 38 GEEPVFLELGVGT-GRIALPLIAR---GYRYIALDADAAMLEVFRQKIAG---VDRKVQVVQADARAIPLPDESVHGVIV 110 (263)
T ss_dssp SSCCEEEEETCTT-STTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTT---SCTTEEEEESCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEeCCcC-CHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhc---cCCceEEEEcccccCCCCCCCeeEEEE
Confidence 6789999999997 5555677763 78999999999999999998732 347899999999998766678999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
...++. ..+..++++++++.|||||.+++.
T Consensus 111 ~~~l~~-~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 111 VHLWHL-VPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ESCGGG-CTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhh-cCCHHHHHHHHHHHCCCCcEEEEE
Confidence 654422 236788999999999999998875
No 74
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.47 E-value=6.9e-13 Score=118.62 Aligned_cols=105 Identities=9% Similarity=0.087 Sum_probs=87.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..++++. ..+|+++|+|+.+++.|++.+.. . .+++|+++|+.+++...+.||+|+.
T Consensus 92 ~~~~~vLDiG~G~-G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~-~---~~~~~~~~d~~~~~~~~~~fD~v~~ 164 (254)
T 1xtp_A 92 HGTSRALDCGAGI-GRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAG-M---PVGKFILASMETATLPPNTYDLIVI 164 (254)
T ss_dssp CCCSEEEEETCTT-THHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTT-S---SEEEEEESCGGGCCCCSSCEEEEEE
T ss_pred cCCCEEEEECCCc-CHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhcc-C---CceEEEEccHHHCCCCCCCeEEEEE
Confidence 5789999999996 55556677653 56899999999999999998875 2 6899999999998766678999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ +++.++..++++++++.|||||.+++..
T Consensus 165 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 165 QWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 6543 4455678999999999999999999876
No 75
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.47 E-value=2.4e-13 Score=120.73 Aligned_cols=102 Identities=11% Similarity=0.138 Sum_probs=85.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++. |++|+|+|+|+.+++.|++.... .+++|+++|+.+++...++||+|+.
T Consensus 52 ~~~~~vLDiG~G~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 52 KKEAEVLDVGCGD-GYGTYKLSRT---GYKAVGVDISEVMIQKGKERGEG-----PDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTCB-----TTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred CCCCeEEEEcCCC-CHHHHHHHHc---CCeEEEEECCHHHHHHHHhhccc-----CCceEEEcchhcCCCCCCCccEEEE
Confidence 5788999999996 5666777763 88999999999999999887533 7899999999998876779999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+. ...+..++++++++.|+|||.+++..
T Consensus 123 ~~~l~-~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 123 INSLE-WTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp ESCTT-SSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cChHh-hccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 65442 23567789999999999999998876
No 76
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.47 E-value=6.3e-14 Score=129.20 Aligned_cols=98 Identities=16% Similarity=0.105 Sum_probs=80.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
..+.+|||||||+ |..+..|++ .+.+|+|+|+|+++++.|++ ..+++|+++|+.+++...++||+|+.
T Consensus 38 ~~~~~vLDvGcGt-G~~~~~l~~---~~~~v~gvD~s~~ml~~a~~--------~~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 38 PARGDALDCGCGS-GQASLGLAE---FFERVHAVDPGEAQIRQALR--------HPRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp SCSSEEEEESCTT-TTTHHHHHT---TCSEEEEEESCHHHHHTCCC--------CTTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCCEEEEcCCC-CHHHHHHHH---hCCEEEEEeCcHHhhhhhhh--------cCCceeehhhhhhhcccCCcccEEEE
Confidence 5568999999996 666678886 37899999999999987642 25799999999999888889999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+++- +..+++++++|+|||||+|++-.
T Consensus 106 ~~~~h~~--~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 106 AQAMHWF--DLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp CSCCTTC--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeehhHh--hHHHHHHHHHHHcCCCCEEEEEE
Confidence 6544432 45679999999999999997744
No 77
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.47 E-value=6e-13 Score=113.23 Aligned_cols=108 Identities=15% Similarity=0.132 Sum_probs=88.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCC-CeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLST-RMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~-ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
.++.+|||||||+ |..++.+++. +.+|+|+|+|+.+++.|++.+.. .++.. +++++++|+.+.. ..+.||+|+
T Consensus 51 ~~~~~vLdiG~G~-G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~-~~~~~~~~~~~~~d~~~~~-~~~~~D~v~ 124 (194)
T 1dus_A 51 DKDDDILDLGCGY-GVIGIALADE---VKSTTMADINRRAIKLAKENIKL-NNLDNYDIRVVHSDLYENV-KDRKYNKII 124 (194)
T ss_dssp CTTCEEEEETCTT-SHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHH-TTCTTSCEEEEECSTTTTC-TTSCEEEEE
T ss_pred CCCCeEEEeCCCC-CHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHH-cCCCccceEEEECchhccc-ccCCceEEE
Confidence 5788999999996 5666677763 88999999999999999999987 67755 6999999998743 345899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
.............++++++.+.|+|||.+++....
T Consensus 125 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 125 TNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp ECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 87644333567789999999999999999887643
No 78
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.47 E-value=1.5e-12 Score=113.33 Aligned_cols=102 Identities=15% Similarity=0.187 Sum_probs=83.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++. +.+|+|+|+|+.+++.|++ . +. .+++|+++|+.++ ...++||+|+.
T Consensus 45 ~~~~~vLdiG~G~-G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~---~--~~-~~~~~~~~d~~~~-~~~~~~D~v~~ 113 (218)
T 3ou2_A 45 NIRGDVLELASGT-GYWTRHLSGL---ADRVTALDGSAEMIAEAGR---H--GL-DNVEFRQQDLFDW-TPDRQWDAVFF 113 (218)
T ss_dssp TSCSEEEEESCTT-SHHHHHHHHH---SSEEEEEESCHHHHHHHGG---G--CC-TTEEEEECCTTSC-CCSSCEEEEEE
T ss_pred CCCCeEEEECCCC-CHHHHHHHhc---CCeEEEEeCCHHHHHHHHh---c--CC-CCeEEEecccccC-CCCCceeEEEE
Confidence 5678999999996 5666777774 8899999999999999987 2 22 6799999999988 55569999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
...+ +++.+...++++++++.|+|||.+++.+.
T Consensus 114 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 114 AHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 6533 44555568999999999999999998764
No 79
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.46 E-value=2e-13 Score=118.49 Aligned_cols=101 Identities=18% Similarity=0.101 Sum_probs=84.4
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
.+.+|||||||+ |..+..++++ |.+|+|+|+|+++++.|++.. .+++|+++|+.+++...+.||+|+..
T Consensus 41 ~~~~vLDiGcG~-G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 41 VDGVILDVGSGT-GRWTGHLASL---GHQIEGLEPATRLVELARQTH-------PSVTFHHGTITDLSDSPKRWAGLLAW 109 (203)
T ss_dssp CCSCEEEETCTT-CHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC-------TTSEEECCCGGGGGGSCCCEEEEEEE
T ss_pred CCCeEEEecCCC-CHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC-------CCCeEEeCcccccccCCCCeEEEEeh
Confidence 488999999996 5555677763 789999999999999998863 36899999999988766799999975
Q ss_pred c-ccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 201 A-LVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 201 a-lvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
. +.+++.++..++++++++.|||||.+++...
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 142 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSFF 142 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 4 3355556889999999999999999998763
No 80
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.46 E-value=1.8e-13 Score=132.16 Aligned_cols=109 Identities=11% Similarity=0.067 Sum_probs=90.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC-----C-C-CCCeEEEEcccccc-----
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP-----D-L-STRMFFHTTDIMNV----- 187 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~-----g-l-~~ri~f~~gDa~~l----- 187 (318)
.++.+|||||||+ |..++.+++.+.++++|+|+|+|+++++.|++.++. . | + ..+++|+++|+.++
T Consensus 82 ~~~~~VLDlGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~g~~~~~~v~~~~~d~~~l~~~~~ 159 (383)
T 4fsd_A 82 LEGATVLDLGCGT-GRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEY-HAEKFFGSPSRSNVRFLKGFIENLATAEP 159 (383)
T ss_dssp GTTCEEEEESCTT-SHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHH-HHHHHHSSTTCCCEEEEESCTTCGGGCBS
T ss_pred CCCCEEEEecCcc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH-hhhhcccccCCCceEEEEccHHHhhhccc
Confidence 5789999999996 677778887655789999999999999999998765 2 2 2 26899999999987
Q ss_pred -CcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 188 -SSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 188 -~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+...++||+|+....+.. ..++.+++++++++|||||.|++.+
T Consensus 160 ~~~~~~~fD~V~~~~~l~~-~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNL-STNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCCTTCEEEEEEESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhc-CCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 666679999997664432 2468899999999999999999865
No 81
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.46 E-value=3.2e-13 Score=117.21 Aligned_cols=126 Identities=12% Similarity=0.224 Sum_probs=94.0
Q ss_pred cCCcChhhHHHhhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCC
Q 021008 95 NIFPYYSNYIKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDL 173 (318)
Q Consensus 95 ~~fpY~~ny~~L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl 173 (318)
..+.+|..|..+.+.- ... ..++.+|||||||+ |..++.+++. +. +|+|+|+|+.+++.|++....
T Consensus 21 ~~~~~~~~~~~~~~~l----~~~-~~~~~~vLdiGcG~-G~~~~~l~~~---~~~~v~~~D~s~~~~~~a~~~~~~---- 87 (215)
T 2pxx_A 21 APYDWFGDFSSFRALL----EPE-LRPEDRILVLGCGN-SALSYELFLG---GFPNVTSVDYSSVVVAAMQACYAH---- 87 (215)
T ss_dssp CCCCTTCCHHHHHHHH----GGG-CCTTCCEEEETCTT-CSHHHHHHHT---TCCCEEEEESCHHHHHHHHHHTTT----
T ss_pred CCcccccCHHHHHHHH----HHh-cCCCCeEEEECCCC-cHHHHHHHHc---CCCcEEEEeCCHHHHHHHHHhccc----
Confidence 3466666666544332 212 26789999999997 5555677764 33 899999999999999998764
Q ss_pred CCCeEEEEccccccCcCCCCccEEEecccc-CCC-------------hhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 174 STRMFFHTTDIMNVSSALKDYEVVFLAALV-GMD-------------KDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 174 ~~ri~f~~gDa~~l~~~l~~fD~V~~aalv-gm~-------------~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
..+++++++|+.+++...++||+|+..... .+. ..+..++++++.+.|||||.+++....
T Consensus 88 ~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 88 VPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp CTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 258999999999987666689999964322 111 346789999999999999999998743
No 82
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.46 E-value=5.6e-13 Score=113.48 Aligned_cols=103 Identities=13% Similarity=0.095 Sum_probs=84.6
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+||+||||. |..+..+++. +.+|+|+|+|+.+++.|++... +++|+++|+.+++...+.||+|+
T Consensus 44 ~~~~~~vLdiG~G~-G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~-------~~~~~~~d~~~~~~~~~~~D~i~ 112 (195)
T 3cgg_A 44 APRGAKILDAGCGQ-GRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP-------EARWVVGDLSVDQISETDFDLIV 112 (195)
T ss_dssp SCTTCEEEEETCTT-THHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT-------TSEEEECCTTTSCCCCCCEEEEE
T ss_pred ccCCCeEEEECCCC-CHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC-------CCcEEEcccccCCCCCCceeEEE
Confidence 46889999999996 5566677763 7899999999999999998653 48999999998766556899999
Q ss_pred ec-ccc-CCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 199 LA-ALV-GMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 199 ~a-alv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
.. ... .++.++..++++++.+.|+|||.+++...
T Consensus 113 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 113 SAGNVMGFLAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp ECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 76 333 44557789999999999999999988653
No 83
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=3.1e-13 Score=121.28 Aligned_cols=102 Identities=15% Similarity=0.196 Sum_probs=84.5
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..+..+++++ |+++|+|+|+|+.+++.|++.. .+++|+++|+.+++ ..++||+|+
T Consensus 31 ~~~~~~vLdiG~G~-G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~~~~~-~~~~fD~v~ 100 (259)
T 2p35_A 31 LERVLNGYDLGCGP-GNSTELLTDRY-GVNVITGIDSDDDMLEKAADRL-------PNTNFGKADLATWK-PAQKADLLY 100 (259)
T ss_dssp CSCCSSEEEETCTT-THHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHS-------TTSEEEECCTTTCC-CSSCEEEEE
T ss_pred CCCCCEEEEecCcC-CHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC-------CCcEEEECChhhcC-ccCCcCEEE
Confidence 46789999999996 56667777764 7999999999999999998862 56899999999987 556899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....++. ..+..++++++++.|||||.+++..
T Consensus 101 ~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 101 ANAVFQW-VPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp EESCGGG-STTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EeCchhh-CCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 7654432 2577899999999999999998865
No 84
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.45 E-value=5.8e-13 Score=117.93 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=85.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++. +.+|+|+|+|+.+++.|++.... .+. +++|+++|+.+++.. +.||+|+.
T Consensus 36 ~~~~~vLdiG~G~-G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~-~~~--~~~~~~~d~~~~~~~-~~fD~v~~ 107 (246)
T 1y8c_A 36 LVFDDYLDLACGT-GNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRS-QGL--KPRLACQDISNLNIN-RKFDLITC 107 (246)
T ss_dssp CCTTEEEEETCTT-STTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHH-TTC--CCEEECCCGGGCCCS-CCEEEEEE
T ss_pred CCCCeEEEeCCCC-CHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhh-cCC--CeEEEecccccCCcc-CCceEEEE
Confidence 4778999999996 5555677763 78999999999999999999887 444 899999999998765 68999997
Q ss_pred cc--ccCC-ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AA--LVGM-DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aa--lvgm-~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.. +.++ +.++..++++++++.|+|||.+++..
T Consensus 108 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 108 CLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 54 3344 34788899999999999999999854
No 85
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.45 E-value=3.9e-13 Score=119.28 Aligned_cols=102 Identities=10% Similarity=0.151 Sum_probs=83.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
.++.+|||||||+ |..+..+++. +. +|+|+|+|+.+++.|++.... .+++|+++|+.+++...++||+|+
T Consensus 42 ~~~~~vLdiG~G~-G~~~~~l~~~---~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCGF-GWFCRWAHEH---GASYVLGLDLSEKMLARARAAGPD-----TGITYERADLDKLHLPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCTT-CHHHHHHHHT---TCSEEEEEESCHHHHHHHHHTSCS-----SSEEEEECCGGGCCCCTTCEEEEE
T ss_pred cCCCEEEEEcCcC-CHHHHHHHHC---CCCeEEEEcCCHHHHHHHHHhccc-----CCceEEEcChhhccCCCCCceEEE
Confidence 5788999999996 5555677763 55 999999999999999987764 479999999999876566899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....++ ...+..++++++++.|+|||.+++..
T Consensus 113 ~~~~l~-~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 113 SSLALH-YVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EESCGG-GCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eecccc-ccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 765432 12467899999999999999999865
No 86
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.44 E-value=5.6e-13 Score=122.28 Aligned_cols=107 Identities=14% Similarity=0.192 Sum_probs=85.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCC---CCCeEEEEccccccC---cCCCC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDL---STRMFFHTTDIMNVS---SALKD 193 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl---~~ri~f~~gDa~~l~---~~l~~ 193 (318)
.++.+|||||||+ |..++.++++ |++|+|+|+|+++++.|++.... .+. ..++.+..+|+.+++ ...++
T Consensus 56 ~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 130 (293)
T 3thr_A 56 HGCHRVLDVACGT-GVDSIMLVEE---GFSVTSVDASDKMLKYALKERWN-RRKEPAFDKWVIEEANWLTLDKDVPAGDG 130 (293)
T ss_dssp TTCCEEEETTCTT-SHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH-TTTSHHHHTCEEEECCGGGHHHHSCCTTC
T ss_pred cCCCEEEEecCCC-CHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhh-cccccccceeeEeecChhhCccccccCCC
Confidence 5778999999996 6666778873 78999999999999999887643 222 257899999999887 55568
Q ss_pred ccEEEec--cccCCCh-----hHHHHHHHHHHHhccCCeEEEEEc
Q 021008 194 YEVVFLA--ALVGMDK-----DEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 194 fD~V~~a--alvgm~~-----~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
||+|+.. .+.++.. ++..++++++++.|||||.+++..
T Consensus 131 fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 131 FDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 9999975 3434432 568999999999999999998865
No 87
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.44 E-value=2.1e-13 Score=128.29 Aligned_cols=108 Identities=11% Similarity=0.098 Sum_probs=79.3
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCC-----CeEEEEccc------cccC-
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLST-----RMFFHTTDI------MNVS- 188 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~-----ri~f~~gDa------~~l~- 188 (318)
++.+|||||||+++.+.. +++. .+++|+|+|+|+++++.|++.... .+... +++|+++|+ .+++
T Consensus 48 ~~~~VLDlGCG~G~~l~~-~~~~--~~~~v~GiD~S~~~l~~A~~~~~~-~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~ 123 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEK-YFYG--EIALLVATDPDADAIARGNERYNK-LNSGIKTKYYKFDYIQETIRSDTFVSSVRE 123 (302)
T ss_dssp SCCEEEETTCTTTTTHHH-HHHT--TCSEEEEEESCHHHHHHHHHHHHH-HCC----CCCEEEEEECCTTSSSHHHHHHT
T ss_pred CCCeEEEEecCCcHhHHH-HHhc--CCCeEEEEECCHHHHHHHHHHHHh-ccccccccccccchhhhhcccchhhhhhhc
Confidence 578999999997555544 4442 368999999999999999998775 34321 277888888 3332
Q ss_pred -cCCCCccEEEeccccC--CChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 189 -SALKDYEVVFLAALVG--MDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 189 -~~l~~fD~V~~aalvg--m~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
...++||+|+....++ ++.+++.+++++++++|||||.+++...
T Consensus 124 ~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 124 VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2345899998543332 2335678999999999999999998763
No 88
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.44 E-value=1.2e-12 Score=123.21 Aligned_cols=106 Identities=14% Similarity=0.117 Sum_probs=89.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++++ |+.+++++|+ |.+++.|++.+.. .|+.++++|+.+|..+ +... +||+|++
T Consensus 168 ~~~~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~-~~p~-~~D~v~~ 241 (332)
T 3i53_A 168 AALGHVVDVGGGS-GGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLD-TGLSGRAQVVVGSFFD-PLPA-GAGGYVL 241 (332)
T ss_dssp GGGSEEEEETCTT-SHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHH-TTCTTTEEEEECCTTS-CCCC-SCSEEEE
T ss_pred CCCCEEEEeCCCh-hHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhh-cCcCcCeEEecCCCCC-CCCC-CCcEEEE
Confidence 4568999999996 56667788765 8999999999 9999999999988 8888999999999973 2222 7999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++.++..++++++++.|+|||+|++.+
T Consensus 242 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 242 SAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 6644 4566667999999999999999998876
No 89
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.44 E-value=8e-13 Score=119.57 Aligned_cols=100 Identities=11% Similarity=0.124 Sum_probs=81.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..++++ +.+|+|+|+|+++++.|++... +++|+++|+.+++. .+.||+|+.
T Consensus 49 ~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-------~~~~~~~d~~~~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 49 PKAASLLDVACGT-GMHLRHLADS---FGTVEGLELSADMLAIARRRNP-------DAVLHHGDMRDFSL-GRRFSAVTC 116 (263)
T ss_dssp TTCCEEEEETCTT-SHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-------TSEEEECCTTTCCC-SCCEEEEEE
T ss_pred CCCCcEEEeCCcC-CHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-------CCEEEECChHHCCc-cCCcCEEEE
Confidence 5679999999996 5556677763 7799999999999999998643 68999999999876 468999997
Q ss_pred cc--ccCCC-hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AA--LVGMD-KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aa--lvgm~-~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.. +..+. .++..++++++++.|||||.+++..
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 63 33442 3677899999999999999999964
No 90
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.43 E-value=7.5e-13 Score=118.60 Aligned_cols=100 Identities=15% Similarity=0.077 Sum_probs=84.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCC--CCCeEEEEcccccc----------
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDL--STRMFFHTTDIMNV---------- 187 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl--~~ri~f~~gDa~~l---------- 187 (318)
.++++||+|||| +|++++|+. ++++|++||.|++..+.|++++++ .|+ .++|+++.||+.+.
T Consensus 29 ~~a~~VLEiGtG---ySTl~lA~~--~~g~VvtvE~d~~~~~~ar~~l~~-~g~~~~~~I~~~~gda~~~~~wg~p~~~~ 102 (202)
T 3cvo_A 29 EEAEVILEYGSG---GSTVVAAEL--PGKHVTSVESDRAWARMMKAWLAA-NPPAEGTEVNIVWTDIGPTGDWGHPVSDA 102 (202)
T ss_dssp HHCSEEEEESCS---HHHHHHHTS--TTCEEEEEESCHHHHHHHHHHHHH-SCCCTTCEEEEEECCCSSBCGGGCBSSST
T ss_pred hCCCEEEEECch---HHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHH-cCCCCCCceEEEEeCchhhhcccccccch
Confidence 568999999996 799999972 589999999999999999999998 898 89999999997653
Q ss_pred -----C---------cCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 188 -----S---------SALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 188 -----~---------~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+ ...+.||+||+++ ++. ...+..+.+.|+|||+|++++
T Consensus 103 ~~~~l~~~~~~i~~~~~~~~fDlIfIDg----~k~--~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 103 KWRSYPDYPLAVWRTEGFRHPDVVLVDG----RFR--VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TGGGTTHHHHGGGGCTTCCCCSEEEECS----SSH--HHHHHHHHHHCSSCEEEEETT
T ss_pred hhhhHHHHhhhhhccccCCCCCEEEEeC----CCc--hhHHHHHHHhcCCCeEEEEeC
Confidence 1 1225799999998 332 366777789999999999987
No 91
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.43 E-value=6.1e-13 Score=117.59 Aligned_cols=100 Identities=14% Similarity=0.198 Sum_probs=81.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++. +.+|+|+|+|+++++.|++.... +++|+++|+.+++ ..++||+|+.
T Consensus 41 ~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~------~v~~~~~d~~~~~-~~~~fD~v~~ 109 (250)
T 2p7i_A 41 FRPGNLLELGSFK-GDFTSRLQEH---FNDITCVEASEEAISHAQGRLKD------GITYIHSRFEDAQ-LPRRYDNIVL 109 (250)
T ss_dssp CCSSCEEEESCTT-SHHHHHHTTT---CSCEEEEESCHHHHHHHHHHSCS------CEEEEESCGGGCC-CSSCEEEEEE
T ss_pred cCCCcEEEECCCC-CHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhhhC------CeEEEEccHHHcC-cCCcccEEEE
Confidence 4778999999996 5666777763 56899999999999999987642 7999999999873 4568999997
Q ss_pred cccc-CCChhHHHHHHHHHH-HhccCCeEEEEEcC
Q 021008 200 AALV-GMDKDEKIRVIDHLA-KYMAPGALLMLRSA 232 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~-r~LkpGg~lv~r~~ 232 (318)
...+ ++ .+..+++++++ ++|||||.+++...
T Consensus 110 ~~~l~~~--~~~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 110 THVLEHI--DDPVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp ESCGGGC--SSHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhHHHhh--cCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 6544 33 45689999999 99999999988763
No 92
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.43 E-value=3e-13 Score=115.18 Aligned_cols=107 Identities=10% Similarity=0.094 Sum_probs=85.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc-CcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV-SSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l-~~~l~~fD~V~ 198 (318)
.++.+|||+|||. |..++.++++ +..+|+|+|+|+++++.|++.++. .|+..+++|+++|+.+. +...+.||+|+
T Consensus 30 ~~~~~vLDlGcG~-G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~fD~i~ 105 (177)
T 2esr_A 30 FNGGRVLDLFAGS-GGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIM-TKAENRFTLLKMEAERAIDCLTGRFDLVF 105 (177)
T ss_dssp CCSCEEEEETCTT-CHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHT-TTCGGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred cCCCeEEEeCCCC-CHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHH-cCCCCceEEEECcHHHhHHhhcCCCCEEE
Confidence 5778999999996 5666777763 457999999999999999999998 78878999999999883 33334799999
Q ss_pred eccccCCChhHHHHHHHHHH--HhccCCeEEEEEcC
Q 021008 199 LAALVGMDKDEKIRVIDHLA--KYMAPGALLMLRSA 232 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~--r~LkpGg~lv~r~~ 232 (318)
..... ......++++.+. +.|+|||.+++...
T Consensus 106 ~~~~~--~~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 106 LDPPY--AKETIVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp ECCSS--HHHHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ECCCC--CcchHHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 76422 1245677888887 99999999988763
No 93
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.43 E-value=9.1e-13 Score=115.05 Aligned_cols=108 Identities=12% Similarity=0.008 Sum_probs=83.4
Q ss_pred HHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc
Q 021008 109 LEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV 187 (318)
Q Consensus 109 ~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l 187 (318)
.+...+.... .++.+|||||||++.++ ..+ +. +|+|+|+|+++++.|++.. .+++++++|+.++
T Consensus 25 ~~~~~l~~~~-~~~~~vLdiG~G~G~~~-~~l------~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~~ 89 (211)
T 2gs9_A 25 EEERALKGLL-PPGESLLEVGAGTGYWL-RRL------PYPQKVGVEPSEAMLAVGRRRA-------PEATWVRAWGEAL 89 (211)
T ss_dssp HHHHHHHTTC-CCCSEEEEETCTTCHHH-HHC------CCSEEEEECCCHHHHHHHHHHC-------TTSEEECCCTTSC
T ss_pred HHHHHHHHhc-CCCCeEEEECCCCCHhH-HhC------CCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcccccC
Confidence 3444444433 47899999999975333 322 56 9999999999999998765 4689999999998
Q ss_pred CcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 188 SSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 188 ~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+...++||+|+....+. ...+..++++++.+.|||||.+++...
T Consensus 90 ~~~~~~fD~v~~~~~l~-~~~~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 90 PFPGESFDVVLLFTTLE-FVEDVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp CSCSSCEEEEEEESCTT-TCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCcEEEEEEcChhh-hcCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 87667899999765442 124678999999999999999988763
No 94
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.43 E-value=1.2e-12 Score=124.80 Aligned_cols=104 Identities=14% Similarity=0.117 Sum_probs=85.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++++|||||||. |.-++.+|+. ...+|+|+|+|+ +++.|++.++. .|+.++++++.+|+.+++...++||+|+.
T Consensus 63 ~~~~~VLDiGcGt-G~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~-~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs 137 (340)
T 2fyt_A 63 FKDKVVLDVGCGT-GILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRL-NKLEDTITLIKGKIEEVHLPVEKVDVIIS 137 (340)
T ss_dssp TTTCEEEEETCTT-SHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHH-TTCTTTEEEEESCTTTSCCSCSCEEEEEE
T ss_pred cCCCEEEEeeccC-cHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHH-cCCCCcEEEEEeeHHHhcCCCCcEEEEEE
Confidence 6789999999996 5556777763 345999999997 99999999988 88889999999999998766568999996
Q ss_pred ccc--cCCChhHHHHHHHHHHHhccCCeEEE
Q 021008 200 AAL--VGMDKDEKIRVIDHLAKYMAPGALLM 228 (318)
Q Consensus 200 aal--vgm~~~~k~~vl~~l~r~LkpGg~lv 228 (318)
..+ ..........++.++.+.|||||+++
T Consensus 138 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 138 EWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 542 11133567789999999999999987
No 95
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.43 E-value=7.3e-13 Score=120.13 Aligned_cols=110 Identities=13% Similarity=0.064 Sum_probs=82.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc-----CCCCCCCeEEEEccccc-cC--cCC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSS-----DPDLSTRMFFHTTDIMN-VS--SAL 191 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~-----~~gl~~ri~f~~gDa~~-l~--~~l 191 (318)
.++.+|||||||. |..++.||+.+ |++.|+|||+|+.+++.|++.+++ ..++ .+++|+++|+.+ ++ ...
T Consensus 45 ~~~~~vLDiGcG~-G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 45 QAQVEFADIGCGY-GGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYK 121 (235)
T ss_dssp -CCEEEEEETCTT-CHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCT
T ss_pred CCCCeEEEEccCC-cHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCC
Confidence 5678999999995 66667888764 899999999999999999887652 0233 679999999987 55 445
Q ss_pred CCccEEEeccccCCCh--hHH-----HHHHHHHHHhccCCeEEEEEcC
Q 021008 192 KDYEVVFLAALVGMDK--DEK-----IRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~--~~k-----~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
++||.|++..-..+.+ ..| ..++++++++|||||.|++...
T Consensus 122 ~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 122 GQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp TCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 6899998653211111 111 4699999999999999998764
No 96
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.42 E-value=1.1e-12 Score=118.99 Aligned_cols=109 Identities=18% Similarity=0.063 Sum_probs=85.4
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChH------HHHHHHHHhhcCCCCCCCeEEEEcc---ccccCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPS------ANSKALSLVSSDPDLSTRMFFHTTD---IMNVSS 189 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~------ai~~Ar~~~~~~~gl~~ri~f~~gD---a~~l~~ 189 (318)
..++.+|||||||. |..++.+++++.++++|+|+|+|+. +++.|++.+.. .|++.+++|+.+| ..+++.
T Consensus 41 ~~~~~~vLDiGcG~-G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~ 118 (275)
T 3bkx_A 41 VKPGEKILEIGCGQ-GDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLA-GPLGDRLTVHFNTNLSDDLGPI 118 (275)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHT-STTGGGEEEECSCCTTTCCGGG
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHh-cCCCCceEEEECChhhhccCCC
Confidence 46889999999996 5666778876445689999999998 99999999987 7887899999999 455555
Q ss_pred CCCCccEEEecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 190 ALKDYEVVFLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 190 ~l~~fD~V~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..++||+|+....+ ++ .+...+++.+.+.++|||.+++.+
T Consensus 119 ~~~~fD~v~~~~~l~~~--~~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYF--ASANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TTCCCSEEEEESCGGGS--SCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCEEEEEEccchhhC--CCHHHHHHHHHHHhCCCCEEEEEE
Confidence 56789999975543 33 234457777777777799998865
No 97
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.42 E-value=9.6e-13 Score=117.17 Aligned_cols=102 Identities=11% Similarity=0.091 Sum_probs=78.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc----CcCCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV----SSALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l----~~~l~~fD 195 (318)
.++.+|||||||+ |..+..+|+.. ++.+|+|+|+|+.+++.+.+.++. . .++.++.+|+.+. +.. +.||
T Consensus 56 ~~g~~VLDlGcGt-G~~~~~la~~~-~~~~V~gvD~s~~~l~~~~~~a~~---~-~~v~~~~~d~~~~~~~~~~~-~~fD 128 (210)
T 1nt2_A 56 RGDERVLYLGAAS-GTTVSHLADIV-DEGIIYAVEYSAKPFEKLLELVRE---R-NNIIPLLFDASKPWKYSGIV-EKVD 128 (210)
T ss_dssp CSSCEEEEETCTT-SHHHHHHHHHT-TTSEEEEECCCHHHHHHHHHHHHH---C-SSEEEECSCTTCGGGTTTTC-CCEE
T ss_pred CCCCEEEEECCcC-CHHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHhc---C-CCeEEEEcCCCCchhhcccc-ccee
Confidence 6788999999997 55666788764 467999999999988777666654 1 4789999999874 222 5899
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+.... +..+...+++++++.|||||.+++..
T Consensus 129 ~V~~~~~---~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 129 LIYQDIA---QKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEecc---ChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9997632 22345556999999999999998874
No 98
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.42 E-value=7.2e-13 Score=118.49 Aligned_cols=99 Identities=13% Similarity=0.052 Sum_probs=80.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc--CcCCCCccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV--SSALKDYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l--~~~l~~fD~V 197 (318)
.++.+|||||||.+ ..+..+++. |++|+|+|+|+++++.|++. ++++++|+.+. +...++||+|
T Consensus 40 ~~~~~vLDiGcG~G-~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~----------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCGRG-EFLELCKEE---GIESIGVDINEDMIKFCEGK----------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCTTT-HHHHHHHHH---TCCEEEECSCHHHHHHHHTT----------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCCCC-HHHHHHHhC---CCcEEEEECCHHHHHHHHhh----------cceeeccHHHHhhhcCCCCeeEE
Confidence 57799999999975 455677764 88999999999999998754 78999999885 5555689999
Q ss_pred Eecccc-CCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 198 FLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 198 ~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+....+ +++.++..++++++.+.|||||.+++...
T Consensus 106 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 106 MISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred EECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 975543 55556779999999999999999998764
No 99
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.42 E-value=6.6e-13 Score=116.11 Aligned_cols=99 Identities=19% Similarity=0.226 Sum_probs=83.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++. |.+|+|+|+|+.+++.|++.. +++++.+|+.+++ ..+.||+|+.
T Consensus 42 ~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~d~~~~~-~~~~fD~v~~ 108 (211)
T 3e23_A 42 PAGAKILELGCGA-GYQAEAMLAA---GFDVDATDGSPELAAEASRRL--------GRPVRTMLFHQLD-AIDAYDAVWA 108 (211)
T ss_dssp CTTCEEEESSCTT-SHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH--------TSCCEECCGGGCC-CCSCEEEEEE
T ss_pred CCCCcEEEECCCC-CHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc--------CCceEEeeeccCC-CCCcEEEEEe
Confidence 5788999999996 5566777763 889999999999999999876 3578899999987 5568999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ +++.++..++++++++.|||||.+++..
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 109 HACLLHVPRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 6533 5566788999999999999999998875
No 100
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.42 E-value=4e-13 Score=118.23 Aligned_cols=106 Identities=12% Similarity=0.122 Sum_probs=83.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCC-CCeEEEEccccccCcC--CCC-ccE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLS-TRMFFHTTDIMNVSSA--LKD-YEV 196 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~-~ri~f~~gDa~~l~~~--l~~-fD~ 196 (318)
++.+|||+|||++.++ +.++++ ...+|+|||+|+++++.|++.++. .|+. ++++|+++|+.++... .+. ||+
T Consensus 53 ~~~~vLDlGcGtG~~~-~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSLG-FEALSR--QAKKVTFLELDKTVANQLKKNLQT-LKCSSEQAEVINQSSLDFLKQPQNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHHH-HHHHHT--TCSEEEEECSCHHHHHHHHHHHHH-TTCCTTTEEEECSCHHHHTTSCCSSCCEEE
T ss_pred CCCeEEEcCCccCHHH-HHHHHc--cCCEEEEEECCHHHHHHHHHHHHH-hCCCccceEEEECCHHHHHHhhccCCCCCE
Confidence 6789999999975554 555543 236999999999999999999988 7775 6899999999886543 347 999
Q ss_pred EEeccccCCChhHHHHHHHHH--HHhccCCeEEEEEcC
Q 021008 197 VFLAALVGMDKDEKIRVIDHL--AKYMAPGALLMLRSA 232 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l--~r~LkpGg~lv~r~~ 232 (318)
|+++.... .....++++.+ .+.|+|||.+++...
T Consensus 129 I~~~~~~~--~~~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 129 VFLDPPFH--FNLAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp EEECCCSS--SCHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EEECCCCC--CccHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 99875322 35677889998 667999999988664
No 101
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.42 E-value=1.3e-12 Score=115.84 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=84.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++. .+|+|+|+|+.+++.|++.... .+ .+++|+++|+.+++.. ++||+|+.
T Consensus 32 ~~~~~vLdiG~G~-G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~-~~--~~~~~~~~d~~~~~~~-~~fD~v~~ 102 (243)
T 3d2l_A 32 EPGKRIADIGCGT-GTATLLLADH----YEVTGVDLSEEMLEIAQEKAME-TN--RHVDFWVQDMRELELP-EPVDAITI 102 (243)
T ss_dssp CTTCEEEEESCTT-CHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHH-TT--CCCEEEECCGGGCCCS-SCEEEEEE
T ss_pred CCCCeEEEecCCC-CHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhh-cC--CceEEEEcChhhcCCC-CCcCEEEE
Confidence 5679999999997 5555667652 7999999999999999999876 33 6799999999988654 68999997
Q ss_pred c--cccCC-ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 A--ALVGM-DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 a--alvgm-~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
. .+.++ +.++..++++++++.|+|||.+++..
T Consensus 103 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 103 LCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 4 33344 45778899999999999999998844
No 102
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.42 E-value=4.2e-13 Score=120.91 Aligned_cols=104 Identities=19% Similarity=0.191 Sum_probs=87.9
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||+|||+ |..++.+++...|+.+|+++|+|+++++.|++.++. .|+.++++++.+|+.+. ...++||+|+
T Consensus 91 ~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~-~~~~~~D~v~ 167 (255)
T 3mb5_A 91 ISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKW-AGFDDRVTIKLKDIYEG-IEEENVDHVI 167 (255)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH-HTCTTTEEEECSCGGGC-CCCCSEEEEE
T ss_pred CCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHH-cCCCCceEEEECchhhc-cCCCCcCEEE
Confidence 36789999999997 566677887645789999999999999999999988 78888899999999875 3445799999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+. .+..++++++.+.|+|||.+++-.
T Consensus 168 ~~~------~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 168 LDL------PQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp ECS------SCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ECC------CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 753 345678999999999999998865
No 103
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.41 E-value=1.9e-12 Score=127.50 Aligned_cols=107 Identities=10% Similarity=0.012 Sum_probs=85.6
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHh-------hcCCCC-CCCeEEEEccccccCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLV-------SSDPDL-STRMFFHTTDIMNVSS 189 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~-------~~~~gl-~~ri~f~~gDa~~l~~ 189 (318)
..++.+|||||||. |..++.+|+.+ ++ +|+|||+++++++.|++.+ +. .|+ ..+|+|++||+.++++
T Consensus 171 l~~gd~VLDLGCGt-G~l~l~lA~~~--g~~kVvGIDiS~~~lelAr~n~e~frkr~~~-~Gl~~~rVefi~GD~~~lp~ 246 (438)
T 3uwp_A 171 MTDDDLFVDLGSGV-GQVVLQVAAAT--NCKHHYGVEKADIPAKYAETMDREFRKWMKW-YGKKHAEYTLERGDFLSEEW 246 (438)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHHC--CCSEEEEEECCHHHHHHHHHHHHHHHHHHHH-HTBCCCEEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCC-CHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHH-hCCCCCCeEEEECcccCCcc
Confidence 47889999999995 66667788753 55 5999999999999998754 33 465 3789999999999875
Q ss_pred CC--CCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 190 AL--KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 190 ~l--~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.. ..||+||+..+.. .++..+.|.++++.|||||+|++-+
T Consensus 247 ~d~~~~aDVVf~Nn~~F--~pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 247 RERIANTSVIFVNNFAF--GPEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp HHHHHTCSEEEECCTTC--CHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred ccccCCccEEEEccccc--CchHHHHHHHHHHcCCCCcEEEEee
Confidence 43 4799999765442 2577888899999999999999865
No 104
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.41 E-value=1.1e-12 Score=122.79 Aligned_cols=107 Identities=16% Similarity=0.166 Sum_probs=89.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++++ |+.+++++|++ .+++.|++.+.. .|+.++++|+.+|..+.+.. +.||+|++
T Consensus 164 ~~~~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~-~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASH-GLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARI-QGVASRYHTIAGSAFEVDYG-NDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTT-CHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHH-HTCGGGEEEEESCTTTSCCC-SCEEEEEE
T ss_pred CCCCEEEEECCCc-CHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHh-cCCCcceEEEecccccCCCC-CCCcEEEE
Confidence 5678999999996 55666788765 89999999999 999999999887 78888999999999876433 25999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++.++..++++++++.|+|||.+++.+
T Consensus 239 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 239 PNFLHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 5533 4566777899999999999999888765
No 105
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.41 E-value=1.6e-12 Score=125.60 Aligned_cols=105 Identities=12% Similarity=0.109 Sum_probs=87.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
.++++|||||||. |..++.+|++ |+ +|+|||+| ++++.|++.++. .|+.++++|+++|+.+++.. +.||+|+
T Consensus 62 ~~~~~VLDlGcGt-G~ls~~la~~---g~~~V~gvD~s-~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~-~~~D~Iv 134 (376)
T 3r0q_C 62 FEGKTVLDVGTGS-GILAIWSAQA---GARKVYAVEAT-KMADHARALVKA-NNLDHIVEVIEGSVEDISLP-EKVDVII 134 (376)
T ss_dssp TTTCEEEEESCTT-THHHHHHHHT---TCSEEEEEESS-TTHHHHHHHHHH-TTCTTTEEEEESCGGGCCCS-SCEEEEE
T ss_pred CCCCEEEEeccCc-CHHHHHHHhc---CCCEEEEEccH-HHHHHHHHHHHH-cCCCCeEEEEECchhhcCcC-CcceEEE
Confidence 6789999999996 6666778873 55 99999999 999999999998 88999999999999998655 6899999
Q ss_pred eccccCC--ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGM--DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm--~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+... .......++..+.+.|||||.+++..
T Consensus 135 ~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 135 SEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp ECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 7543211 23457789999999999999998755
No 106
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.41 E-value=3.8e-12 Score=122.11 Aligned_cols=106 Identities=16% Similarity=0.197 Sum_probs=89.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++++ |+.+++++|+ +.+++.|++.+.. .|+.++++|+.+|..+ +... +||+|++
T Consensus 201 ~~~~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~-~~l~~~v~~~~~d~~~-~~p~-~~D~v~~ 274 (369)
T 3gwz_A 201 SGAATAVDIGGGR-GSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTG-RGLADRCEILPGDFFE-TIPD-GADVYLI 274 (369)
T ss_dssp TTCSEEEEETCTT-SHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHH-TTCTTTEEEEECCTTT-CCCS-SCSEEEE
T ss_pred ccCcEEEEeCCCc-cHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhh-cCcCCceEEeccCCCC-CCCC-CceEEEh
Confidence 5679999999996 66667788764 8999999999 9999999999988 8888999999999983 2222 7999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++.+...++++++++.|+|||+|++.+
T Consensus 275 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 275 KHVLHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred hhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 6644 4566666799999999999999998866
No 107
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=6e-13 Score=126.73 Aligned_cols=108 Identities=15% Similarity=0.199 Sum_probs=85.7
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC--CCCccEEEe
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA--LKDYEVVFL 199 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~--l~~fD~V~~ 199 (318)
+.+||+||||. |..+..+++++ |+++|++||||+++++.||+.+.. . ...|++++.+|+.+.... .++||+|++
T Consensus 90 ~~rVLdIG~G~-G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~-~-~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 90 KLRITHLGGGA-CTMARYFADVY-PQSRNTVVELDAELARLSREWFDI-P-RAPRVKIRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp GCEEEEESCGG-GHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCC-C-CTTTEEEEESCHHHHHHTCCTTCEEEEEE
T ss_pred CCEEEEEECCc-CHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccc-c-CCCceEEEECcHHHHHhhccCCCCCEEEE
Confidence 34999999995 67777888754 899999999999999999999874 2 357999999999875433 358999998
Q ss_pred ccccCCCh---hHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 200 AALVGMDK---DEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 200 aalvgm~~---~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
+...+... -...+++++++++|+|||++++...+
T Consensus 166 D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 166 DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 86543211 11368999999999999999987753
No 108
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.40 E-value=4.9e-13 Score=131.16 Aligned_cols=115 Identities=13% Similarity=0.068 Sum_probs=87.2
Q ss_pred CCcChhhHHHhhHHHHHHHhhcccCCCCEEEEEccC------CChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc
Q 021008 96 IFPYYSNYIKLSQLEFNILTQHCSRFPTKIAFIGSG------PLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSS 169 (318)
Q Consensus 96 ~fpY~~ny~~L~~~E~~~l~~~~~~~~~rVL~IGsG------plp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~ 169 (318)
.+.|...|.++... + ..++.+||||||| ++|. ++.++++++|+++|+|||+|+.+. .
T Consensus 199 ~h~y~~~Ye~lL~~----l----~~~~~rVLDIGCG~~~~~~TGG~-Sl~la~~~fP~a~V~GVDiSp~m~------~-- 261 (419)
T 3sso_A 199 LHWFTPHYDRHFRD----Y----RNQQVRVLEIGVGGYKHPEWGGG-SLRMWKSFFPRGQIYGLDIMDKSH------V-- 261 (419)
T ss_dssp SCBCHHHHHHHHGG----G----TTSCCEEEEECCSCTTCSSCCCH-HHHHHHHHCTTCEEEEEESSCCGG------G--
T ss_pred cchHHHHHHHHHHh----h----cCCCCEEEEEecCCCcCCCCCHH-HHHHHHHhCCCCEEEEEECCHHHh------h--
Confidence 44455556554322 1 2578999999999 4444 456666667999999999999862 1
Q ss_pred CCCCCCCeEEEEccccccCcC------CCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 170 DPDLSTRMFFHTTDIMNVSSA------LKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 170 ~~gl~~ri~f~~gDa~~l~~~------l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
...+++|+++|+.++++. .++||+|+.++.. ...+..++|++++++|||||++++.+-
T Consensus 262 ---~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgsH--~~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 262 ---DELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGSH--INAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp ---CBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSCC--CHHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred ---cCCCcEEEEecccccchhhhhhcccCCccEEEECCcc--cchhHHHHHHHHHHhcCCCeEEEEEec
Confidence 237899999999997654 4689999977543 346788999999999999999999873
No 109
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.40 E-value=1.2e-12 Score=119.43 Aligned_cols=107 Identities=10% Similarity=0.056 Sum_probs=90.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|+|||||+ |+-++.+|+. .+..+|+++|+|+.+++.|+++++. .|+.++++|+.+|+.+.......||+|++
T Consensus 20 ~~g~~VlDIGtGs-G~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~-~gl~~~I~~~~gD~l~~~~~~~~~D~Ivi 96 (230)
T 3lec_A 20 PKGARLLDVGSDH-AYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSE-HGLTSKIDVRLANGLSAFEEADNIDTITI 96 (230)
T ss_dssp CTTEEEEEETCST-THHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHH-TTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCch-HHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEECchhhccccccccCEEEE
Confidence 6778999999996 6667888875 4677999999999999999999998 89999999999999987654337999998
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+..- ..-=.+++++..++++++|.|++-.-
T Consensus 97 aGmG---g~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 97 CGMG---GRLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp EEEC---HHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred eCCc---hHHHHHHHHHHHHHhCcCCEEEEECC
Confidence 7643 34567899999999999999998663
No 110
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.40 E-value=2.2e-12 Score=121.98 Aligned_cols=108 Identities=19% Similarity=0.269 Sum_probs=90.2
Q ss_pred CC-CCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc-CCCCccEE
Q 021008 120 RF-PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS-ALKDYEVV 197 (318)
Q Consensus 120 ~~-~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~-~l~~fD~V 197 (318)
.+ +.+|||||||+ |..+..+++++ |+.+++++|+ +++++.|++.+.. .++.++++|+.+|..+.+. ..++||+|
T Consensus 177 ~~~~~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~D~v 252 (352)
T 3mcz_A 177 FARARTVIDLAGGH-GTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHA-HDLGGRVEFFEKNLLDARNFEGGAADVV 252 (352)
T ss_dssp GTTCCEEEEETCTT-CHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHH-TTCGGGEEEEECCTTCGGGGTTCCEEEE
T ss_pred cCCCCEEEEeCCCc-CHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHh-cCCCCceEEEeCCcccCcccCCCCccEE
Confidence 45 89999999996 56667778764 8999999999 8999999999988 7888899999999988641 22469999
Q ss_pred Eecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
++...+ .++.++..++++++++.|+|||+|++.+
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 253 MLNDCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 976544 5566677999999999999999998865
No 111
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.40 E-value=4.5e-13 Score=127.05 Aligned_cols=110 Identities=12% Similarity=0.137 Sum_probs=83.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC--CC-CCCeEEEEcccccc-CcCCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP--DL-STRMFFHTTDIMNV-SSALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~--gl-~~ri~f~~gDa~~l-~~~l~~fD 195 (318)
..++|||+||||. |..++.+++ +.++.+|+++|+|+++++.|++.+.. . |+ ..+++++.+|+.+. +...+.||
T Consensus 107 ~~~~~VLdIG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~Ar~~~~~-~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 183 (314)
T 2b2c_A 107 PDPKRVLIIGGGD-GGILREVLK-HESVEKVTMCEIDEMVIDVAKKFLPG-MSCGFSHPKLDLFCGDGFEFLKNHKNEFD 183 (314)
T ss_dssp SSCCEEEEESCTT-SHHHHHHTT-CTTCCEEEEECSCHHHHHHHHHHCTT-TSGGGGCTTEEEECSCHHHHHHHCTTCEE
T ss_pred CCCCEEEEEcCCc-CHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHH-hccccCCCCEEEEEChHHHHHHhcCCCce
Confidence 5779999999995 677777876 44689999999999999999999875 3 44 57999999999873 33345899
Q ss_pred EEEeccccCCChhHH---HHHHHHHHHhccCCeEEEEEcC
Q 021008 196 VVFLAALVGMDKDEK---IRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 196 ~V~~aalvgm~~~~k---~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+|++++..+...... .++++++.+.|+|||++++...
T Consensus 184 ~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 184 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp EEEECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 999887432211111 6899999999999999999864
No 112
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.40 E-value=1.7e-12 Score=113.15 Aligned_cols=101 Identities=12% Similarity=0.166 Sum_probs=84.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+++. +..+|+|+|+|+.+++.|++.+.. .++.+ ++|+++|+.+.+ .+.||+|+.
T Consensus 59 ~~~~~vLDiG~G~-G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~-v~~~~~d~~~~~--~~~fD~i~~ 131 (205)
T 3grz_A 59 VKPLTVADVGTGS-GILAIAAHKL--GAKSVLATDISDESMTAAEENAAL-NGIYD-IALQKTSLLADV--DGKFDLIVA 131 (205)
T ss_dssp SSCCEEEEETCTT-SHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHH-TTCCC-CEEEESSTTTTC--CSCEEEEEE
T ss_pred cCCCEEEEECCCC-CHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHH-cCCCc-eEEEeccccccC--CCCceEEEE
Confidence 6789999999997 5666678762 566999999999999999999987 67755 999999998753 358999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
... .....++++++.+.|+|||.+++..
T Consensus 132 ~~~----~~~~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 132 NIL----AEILLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp ESC----HHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred CCc----HHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 653 3556889999999999999998854
No 113
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.40 E-value=7.7e-13 Score=116.45 Aligned_cols=106 Identities=12% Similarity=0.112 Sum_probs=79.1
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHH----HHHhhcCCCCCCCeEEEEccccccCcCCCCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKA----LSLVSSDPDLSTRMFFHTTDIMNVSSALKDY 194 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~A----r~~~~~~~gl~~ri~f~~gDa~~l~~~l~~f 194 (318)
..++.+|||||||+ |..++.+|++ .|+++|+|+|+|+++++.+ ++.... .++ .+++|+++|+.++++..+.
T Consensus 25 ~~~~~~vLDiGcG~-G~~~~~la~~-~p~~~v~gvD~s~~~l~~~~~~a~~~~~~-~~~-~~v~~~~~d~~~l~~~~~~- 99 (218)
T 3mq2_A 25 SQYDDVVLDVGTGD-GKHPYKVARQ-NPSRLVVALDADKSRMEKISAKAAAKPAK-GGL-PNLLYLWATAERLPPLSGV- 99 (218)
T ss_dssp TTSSEEEEEESCTT-CHHHHHHHHH-CTTEEEEEEESCGGGGHHHHHHHTSCGGG-TCC-TTEEEEECCSTTCCSCCCE-
T ss_pred ccCCCEEEEecCCC-CHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHhhhh-cCC-CceEEEecchhhCCCCCCC-
Confidence 36788999999996 6666778876 4899999999999988753 333333 444 4899999999998876555
Q ss_pred cEEEeccccCCC------hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALVGMD------KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalvgm~------~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|.|++.. .+. ..+..++++++++.|||||++++..
T Consensus 100 d~v~~~~--~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 100 GELHVLM--PWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEEEES--CCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEEEc--cchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 8776221 110 1223789999999999999999854
No 114
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.39 E-value=8.5e-13 Score=124.01 Aligned_cols=109 Identities=13% Similarity=0.213 Sum_probs=81.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCC---C-CCCeEEEEccccccCc-CCCCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPD---L-STRMFFHTTDIMNVSS-ALKDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~g---l-~~ri~f~~gDa~~l~~-~l~~f 194 (318)
..++|||+||||. |..+..+++ +.+..+|++||+|+++++.|++.+.. .+ + ..|++++.+|+.+... ..++|
T Consensus 82 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~V~~VDid~~vi~~ar~~~~~-~~~~~~~~~rv~~~~~D~~~~l~~~~~~f 158 (294)
T 3adn_A 82 GHAKHVLIIGGGD-GAMLREVTR-HKNVESITMVEIDAGVVSFCRQYLPN-HNAGSYDDPRFKLVIDDGVNFVNQTSQTF 158 (294)
T ss_dssp TTCCEEEEESCTT-CHHHHHHHT-CTTCCEEEEECSCTTHHHHHHHHCHH-HHSSCTTCTTCCEECSCSCC---CCCCCE
T ss_pred CCCCEEEEEeCCh-hHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHhhhh-cccccccCCceEEEEChHHHHHhhcCCCc
Confidence 6789999999996 566667775 44678999999999999999998765 21 2 4699999999987543 33589
Q ss_pred cEEEeccccCCChhH---HHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALVGMDKDE---KIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalvgm~~~~---k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+|+++...+..... ..++++.+.+.|+|||++++..
T Consensus 159 DvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 999987653221111 1679999999999999999976
No 115
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.39 E-value=4e-13 Score=121.71 Aligned_cols=101 Identities=11% Similarity=0.061 Sum_probs=81.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHh---CCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc---CcCCC-
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAIN---HLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV---SSALK- 192 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~---~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l---~~~l~- 192 (318)
.++.+|||||||+ |..++.||+. ..++++|+|||+|+++++.|+. +..+++|+++|+.+. +...+
T Consensus 80 ~~~~~VLDiG~Gt-G~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-------~~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 80 LRPRTIVELGVYN-GGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-------DMENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp HCCSEEEEECCTT-SHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-------GCTTEEEEECCSSCSGGGGGGSSS
T ss_pred cCCCEEEEEeCCC-CHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-------cCCceEEEECcchhHHHHHhhccC
Confidence 3578999999996 6777788875 3478999999999999988862 347899999999884 43223
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHH-hccCCeEEEEEcC
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAK-YMAPGALLMLRSA 232 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r-~LkpGg~lv~r~~ 232 (318)
.||+|++++.. .+..+++.++.+ .|||||++++.+.
T Consensus 152 ~fD~I~~d~~~----~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 152 AHPLIFIDNAH----ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSSEEEEESSC----SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCCEEEECCch----HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 69999987642 356779999997 9999999999763
No 116
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.39 E-value=1.9e-12 Score=113.13 Aligned_cols=101 Identities=15% Similarity=0.132 Sum_probs=83.0
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..+..+++. +.+|+++|+|+++++.|++.++. .|+. +++|+.+|+.+.....+.||+|+
T Consensus 75 ~~~~~~vLdiG~G~-G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~-~~~~-~v~~~~~d~~~~~~~~~~~D~i~ 148 (210)
T 3lbf_A 75 LTPQSRVLEIGTGS-GYQTAILAHL---VQHVCSVERIKGLQWQARRRLKN-LDLH-NVSTRHGDGWQGWQARAPFDAII 148 (210)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHH-TTCC-SEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCCCEEEEEcCCC-CHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHH-cCCC-ceEEEECCcccCCccCCCccEEE
Confidence 36789999999996 6666788874 88999999999999999999988 7774 79999999998665556899999
Q ss_pred ecccc-CCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 199 LAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 199 ~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
..... .++ +++.+.|||||++++--..
T Consensus 149 ~~~~~~~~~--------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 149 VTAAPPEIP--------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp ESSBCSSCC--------THHHHTEEEEEEEEEEECS
T ss_pred Eccchhhhh--------HHHHHhcccCcEEEEEEcC
Confidence 87644 222 2578999999999887654
No 117
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.39 E-value=2.1e-12 Score=109.59 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=86.1
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||+|||+ |..++.+++. +.+|+++|+|+++++.|++.+.. .|+..+++++++|+.+.....+.||+|+
T Consensus 31 ~~~~~~vldiG~G~-G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 105 (192)
T 1l3i_A 31 PGKNDVAVDVGCGT-GGVTLELAGR---VRRVYAIDRNPEAISTTEMNLQR-HGLGDNVTLMEGDAPEALCKIPDIDIAV 105 (192)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHH-TTCCTTEEEEESCHHHHHTTSCCEEEEE
T ss_pred CCCCCEEEEECCCC-CHHHHHHHHh---cCEEEEEECCHHHHHHHHHHHHH-cCCCcceEEEecCHHHhcccCCCCCEEE
Confidence 36789999999996 6666777763 38999999999999999999988 7777899999999987222335899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..... ....++++++.+.|+|||.+++..
T Consensus 106 ~~~~~----~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 106 VGGSG----GELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp ESCCT----TCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCch----HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 77532 356889999999999999998865
No 118
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.39 E-value=2.2e-12 Score=117.04 Aligned_cols=95 Identities=14% Similarity=0.109 Sum_probs=78.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++.+ ++++|+|+|+|+.+++.|++.. .++.|+.+|+.+++...++||+|+.
T Consensus 84 ~~~~~vLdiG~G~-G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGE-GYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY-------PQVTFCVASSHRLPFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTT-STTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC-------TTSEEEECCTTSCSBCTTCEEEEEE
T ss_pred CCCCEEEEECCCC-CHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcchhhCCCCCCceeEEEE
Confidence 5788999999997 66666777753 7899999999999999998764 4579999999998876679999995
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.. + ...++++.+.|||||.+++-.
T Consensus 155 ~~-~-------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 155 IY-A-------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp ES-C-------CCCHHHHHHHEEEEEEEEEEE
T ss_pred eC-C-------hhhHHHHHHhcCCCcEEEEEE
Confidence 43 2 125889999999999998866
No 119
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.39 E-value=2.9e-12 Score=114.52 Aligned_cols=102 Identities=12% Similarity=0.143 Sum_probs=82.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc----cCcCCCCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN----VSSALKDY 194 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~----l~~~l~~f 194 (318)
..++.+|||||||+ |..++.+|+.+ +..+|+|+|+|+++++.|++.++. . .++.|+.+|+.+ ++.. ..|
T Consensus 72 ~~~~~~VLDlGcG~-G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~---~-~~v~~~~~d~~~~~~~~~~~-~~~ 144 (230)
T 1fbn_A 72 IKRDSKILYLGASA-GTTPSHVADIA-DKGIVYAIEYAPRIMRELLDACAE---R-ENIIPILGDANKPQEYANIV-EKV 144 (230)
T ss_dssp CCTTCEEEEESCCS-SHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHTTT---C-TTEEEEECCTTCGGGGTTTS-CCE
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHc-CCcEEEEEECCHHHHHHHHHHhhc---C-CCeEEEECCCCCcccccccC-ccE
Confidence 35788999999996 67778888764 468999999999999999998776 2 789999999987 5544 589
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
|+|+.+. . +......+++++.+.|||||.+++-
T Consensus 145 D~v~~~~--~-~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYEDV--A-QPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEECC--C-STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEec--C-ChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 9999432 1 2344577899999999999999884
No 120
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.39 E-value=2.1e-12 Score=121.33 Aligned_cols=103 Identities=13% Similarity=0.147 Sum_probs=87.0
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEeccc
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAAL 202 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aal 202 (318)
.+|||||||+ |..+..+++++ |+.+++++|+ +.+++.|++.+.. .|+.++++|+.+|..+ +.. ++||+|++...
T Consensus 169 ~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~v 242 (334)
T 2ip2_A 169 RSFVDVGGGS-GELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSS-LLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRI 242 (334)
T ss_dssp CEEEEETCTT-CHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHH-HHHTTSEEEEESCTTT-CCC-SSCSEEEEESC
T ss_pred CEEEEeCCCc-hHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhh-cCCCCcEEEecCCCCC-CCC-CCCCEEEEchh
Confidence 8999999996 55667778765 8999999999 9999999999887 6777899999999987 333 47999997665
Q ss_pred c-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 203 V-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 203 v-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+ .++.++..++++++++.|+|||++++.+
T Consensus 243 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 243 IGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp GGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 4 4566677799999999999999998876
No 121
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=4.7e-13 Score=121.70 Aligned_cols=98 Identities=14% Similarity=0.066 Sum_probs=80.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+++ ++++|+|+|+|+.+++.|++.. +++|+++|+.+++...++||+|+.
T Consensus 33 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~d~~~~~~~~~~fD~v~~ 100 (261)
T 3ege_A 33 PKGSVIADIGAGT-GGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP--------QVEWFTGYAENLALPDKSVDGVIS 100 (261)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT--------TEEEECCCTTSCCSCTTCBSEEEE
T ss_pred CCCCEEEEEcCcc-cHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc--------CCEEEECchhhCCCCCCCEeEEEE
Confidence 6789999999996 666677886 6899999999999988765321 899999999998877779999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...++ ...+..++++++++.|| ||.+++-+
T Consensus 101 ~~~l~-~~~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 101 ILAIH-HFSHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp ESCGG-GCSSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred cchHh-hccCHHHHHHHHHHHhC-CcEEEEEE
Confidence 66442 22678899999999999 99776655
No 122
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.39 E-value=2.6e-12 Score=117.41 Aligned_cols=104 Identities=10% Similarity=0.140 Sum_probs=86.4
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc---CcCCCCcc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV---SSALKDYE 195 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l---~~~l~~fD 195 (318)
+.++.+|||+|||+ |.++..+|+...|+.+|+|+|+++++++.+++.+++ ..++..+.+|+.+. +.....+|
T Consensus 75 ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~----~~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 75 VKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD----RRNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT----CTTEEEEESCTTCGGGGTTTCCCEE
T ss_pred CCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh----hcCeeEEEEeccCccccccccceEE
Confidence 58999999999995 788889998777899999999999999999998776 25789999998753 33345799
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
+||.+-. ...++..++.++++.|||||.+++-
T Consensus 150 vVf~d~~---~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 150 GLYADVA---QPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecc---CChhHHHHHHHHHHhccCCCEEEEE
Confidence 9986532 2367888999999999999998874
No 123
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.39 E-value=4.3e-12 Score=120.75 Aligned_cols=106 Identities=14% Similarity=0.113 Sum_probs=89.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++++ |+.+++++|+ +.+++.|++.++. .|+.++++|+.+|+.+.+. .++|+|++
T Consensus 189 ~~~~~vLDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~--~~~D~v~~ 262 (359)
T 1x19_A 189 DGVKKMIDVGGGI-GDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAE-KGVADRMRGIAVDIYKESY--PEADAVLF 262 (359)
T ss_dssp TTCCEEEEESCTT-CHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHH-TTCTTTEEEEECCTTTSCC--CCCSEEEE
T ss_pred CCCCEEEEECCcc-cHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHh-cCCCCCEEEEeCccccCCC--CCCCEEEE
Confidence 6778999999996 56667788764 8999999999 9999999999988 7888899999999988643 34599987
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++.++..++++++++.|||||++++.+
T Consensus 263 ~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 263 CRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred echhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 6544 4565668999999999999999997765
No 124
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.39 E-value=1.2e-12 Score=117.49 Aligned_cols=105 Identities=17% Similarity=0.163 Sum_probs=87.2
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC-CCCCCeEEEEccccccCcCCCCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP-DLSTRMFFHTTDIMNVSSALKDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~-gl~~ri~f~~gDa~~l~~~l~~fD~V 197 (318)
..++.+|||+|||+ |..++.+++...|+.+|+++|+|+++++.|++.++. . | ..+++|+.+|+.+.+...+.||+|
T Consensus 94 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~-~~g-~~~v~~~~~d~~~~~~~~~~~D~v 170 (258)
T 2pwy_A 94 LAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRA-FWQ-VENVRFHLGKLEEAELEEAAYDGV 170 (258)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-HCC-CCCEEEEESCGGGCCCCTTCEEEE
T ss_pred CCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-hcC-CCCEEEEECchhhcCCCCCCcCEE
Confidence 36789999999996 666677887645789999999999999999999887 5 6 578999999999875444689999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+++. .+..++++++.+.|+|||.+++-..
T Consensus 171 ~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 171 ALDL------MEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp EEES------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred EECC------cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 9753 2445789999999999999988764
No 125
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.39 E-value=3.9e-12 Score=112.60 Aligned_cols=109 Identities=11% Similarity=0.120 Sum_probs=83.6
Q ss_pred cCCCCEEEEEccC-CChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC-cCCCCccE
Q 021008 119 SRFPTKIAFIGSG-PLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS-SALKDYEV 196 (318)
Q Consensus 119 ~~~~~rVL~IGsG-plp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~-~~l~~fD~ 196 (318)
..++.+||||||| + |..++.+|+.. +.+|+|+|+|+++++.|++++.. .|+ +++|+++|+..+. ...+.||+
T Consensus 53 ~~~~~~vLDlG~G~~-G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~-~~~--~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 53 LRGGEVALEIGTGHT-AMMALMAEKFF--NCKVTATEVDEEFFEYARRNIER-NNS--NVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp CCSSCEEEEECCTTT-CHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHH-TTC--CCEEEECSSCSSTTTCCSCEEE
T ss_pred cCCCCEEEEcCCCHH-HHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHH-hCC--CcEEEeCCchhhhhcccCceeE
Confidence 4688999999999 7 56667788753 89999999999999999999988 666 8999999975432 22358999
Q ss_pred EEecccc-CC-----------------ChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 197 VFLAALV-GM-----------------DKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 197 V~~aalv-gm-----------------~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
|+..--. .. ......++++++.+.|||||.+++-..+
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 181 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD 181 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence 9965211 10 0122478999999999999999886543
No 126
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.38 E-value=4.2e-12 Score=120.84 Aligned_cols=106 Identities=12% Similarity=0.217 Sum_probs=87.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc-cCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN-VSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~-l~~~l~~fD~V~ 198 (318)
.++.+|||||||. |..++.+++++ |+.+++++|+ +.+++.|++.+.. .|+.++++|+.+|+.+ ++. .||+|+
T Consensus 181 ~~~~~vlDvG~G~-G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~---~~D~v~ 253 (374)
T 1qzz_A 181 SAVRHVLDVGGGN-GGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFAD-AGLADRVTVAEGDFFKPLPV---TADVVL 253 (374)
T ss_dssp TTCCEEEEETCTT-SHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHH-TTCTTTEEEEECCTTSCCSC---CEEEEE
T ss_pred CCCCEEEEECCCc-CHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHh-cCCCCceEEEeCCCCCcCCC---CCCEEE
Confidence 5678999999996 56667788765 8999999999 9999999999988 7888899999999976 332 499998
Q ss_pred ecccc-CCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 199 LAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 199 ~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+...+ .++.++..++++++++.|+|||++++.+.
T Consensus 254 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 254 LSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 76544 45556667999999999999998887554
No 127
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.38 E-value=1.3e-12 Score=117.65 Aligned_cols=105 Identities=14% Similarity=0.110 Sum_probs=77.1
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCC-hHHHHHH---HHHhhcCCCCCCCeEEEEccccccCcCC-CC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDID-PSANSKA---LSLVSSDPDLSTRMFFHTTDIMNVSSAL-KD 193 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid-~~ai~~A---r~~~~~~~gl~~ri~f~~gDa~~l~~~l-~~ 193 (318)
..++.+|||||||+ |..++.+|++ .++++|+|||+| +.+++.| ++.+.. .|+ .+++|+++|+.+++... +.
T Consensus 22 ~~~~~~vLDiGCG~-G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~-~~~-~~v~~~~~d~~~l~~~~~d~ 97 (225)
T 3p2e_A 22 GQFDRVHIDLGTGD-GRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSK-GGL-SNVVFVIAAAESLPFELKNI 97 (225)
T ss_dssp TTCSEEEEEETCTT-SHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGG-TCC-SSEEEECCBTTBCCGGGTTC
T ss_pred CCCCCEEEEEeccC-cHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHH-cCC-CCeEEEEcCHHHhhhhccCe
Confidence 36788999999996 6666788865 389999999999 5555555 877776 666 47999999999986422 34
Q ss_pred ccEEEeccccCCCh------hHHHHHHHHHHHhccCCeEEEE
Q 021008 194 YEVVFLAALVGMDK------DEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 194 fD~V~~aalvgm~~------~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
+|.|++.. .++. .+..+++++++++|||||++++
T Consensus 98 v~~i~~~~--~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 98 ADSISILF--PWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEEES--CCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEEeC--CCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 55555321 1111 1225689999999999999988
No 128
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.38 E-value=5.9e-13 Score=118.70 Aligned_cols=105 Identities=14% Similarity=0.147 Sum_probs=82.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||+|||. |.+|+.++.. .|+++|+++|+|+.+++.++++++. .|.+.+++| +|..+.+ .-++||+|+.
T Consensus 48 ~~~~~VLDlGCG~-GplAl~l~~~-~p~a~~~A~Di~~~~leiar~~~~~-~g~~~~v~~--~d~~~~~-~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCGF-NPLALYQWNE-NEKIIYHAYDIDRAEIAFLSSIIGK-LKTTIKYRF--LNKESDV-YKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCTT-HHHHHHHHCS-SCCCEEEEECSCHHHHHHHHHHHHH-SCCSSEEEE--ECCHHHH-TTSEEEEEEE
T ss_pred CCCCeEEEecCCC-CHHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHHh-cCCCccEEE--ecccccC-CCCCcChhhH
Confidence 6789999999995 6666777754 4899999999999999999999998 788777887 5665432 2347999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..+++. ..+....+..+++.|+|||++|-..
T Consensus 122 ~k~LHl-L~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 122 LKMLPV-LKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ETCHHH-HHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhHHHh-hhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 665532 2555667779999999999998765
No 129
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.38 E-value=2.8e-12 Score=113.69 Aligned_cols=104 Identities=13% Similarity=0.127 Sum_probs=82.0
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC--cC-CCCcc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS--SA-LKDYE 195 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~--~~-l~~fD 195 (318)
..++.+|||+|||+ |..++.+|+.+.++.+|+|+|+|+++++.+++.++. . .+++|+++|+.+.. .. .+.||
T Consensus 71 ~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-~---~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 71 IKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-R---RNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-C---TTEEEEECCTTCGGGGTTTCCCEE
T ss_pred CCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-c---CCCEEEEccCCCcchhhcccCCce
Confidence 36788999999996 666678887654568999999999999999998876 2 68999999998732 11 24799
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
+|+.+.. .......++.++.+.|||||.+++.
T Consensus 146 ~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 146 VIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEECCC---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 9997653 2233345599999999999998886
No 130
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=1.9e-12 Score=118.41 Aligned_cols=99 Identities=17% Similarity=0.125 Sum_probs=81.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++ ++++|+|+|+|+.+++.|++.. .+++|+++|+.+++. .++||+|+.
T Consensus 56 ~~~~~vLDiGcG~-G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~fD~v~~ 123 (279)
T 3ccf_A 56 QPGEFILDLGCGT-GQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-------PHLHFDVADARNFRV-DKPLDAVFS 123 (279)
T ss_dssp CTTCEEEEETCTT-SHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-------TTSCEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCCEEEEecCCC-CHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-------CCCEEEECChhhCCc-CCCcCEEEE
Confidence 6788999999996 566667776 6899999999999999998764 468899999999875 358999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...++. ..+..++++++++.|||||.+++..
T Consensus 124 ~~~l~~-~~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 124 NAMLHW-VKEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp ESCGGG-CSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhh-CcCHHHHHHHHHHhcCCCcEEEEEe
Confidence 654421 2467789999999999999998865
No 131
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.37 E-value=2.6e-12 Score=114.71 Aligned_cols=104 Identities=11% Similarity=0.115 Sum_probs=82.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc---cCcCCCCcc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN---VSSALKDYE 195 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~---l~~~l~~fD 195 (318)
..++.+|||||||+ |..+..+|+.+.++.+|+|+|+|+.+++.+.+.++. . .+++|+++|+.+ ++...+.||
T Consensus 75 ~~~~~~vLDlG~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-~---~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 75 IKPGAKVLYLGAAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-R---TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-C---TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-c---CCeEEEEcccCChhhhcccCCcEE
Confidence 36788999999996 666678887654678999999999998888888776 2 689999999987 333345899
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
+|+.+.. .......++.++.+.|||||.+++.
T Consensus 150 ~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 150 VIFADVA---QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp EEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 9997643 2344456788999999999999884
No 132
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.37 E-value=1e-12 Score=121.59 Aligned_cols=109 Identities=12% Similarity=0.222 Sum_probs=78.7
Q ss_pred CCCCEEEEEccCCChHHHHH---HHHhCCCCcEE--EEEeCChHHHHHHHHHhhcCCCCCCCe--EEEEccccccC----
Q 021008 120 RFPTKIAFIGSGPLPLTSIV---LAINHLTTTCF--DNYDIDPSANSKALSLVSSDPDLSTRM--FFHTTDIMNVS---- 188 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~---LA~~~~~ga~V--~gvDid~~ai~~Ar~~~~~~~gl~~ri--~f~~gDa~~l~---- 188 (318)
.++.||||||||++.+|... ++.++ ++++| +|+|+|+++++.|++.++...++ .++ .+..+++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~-~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQY-PGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHS-TTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhC-CCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhc
Confidence 45679999999976555322 23333 67755 99999999999999988752244 344 55677776654
Q ss_pred --cCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 189 --SALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 189 --~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+..++||+|+....++ ..++..+++++++++|||||.+++-.
T Consensus 129 ~~~~~~~fD~V~~~~~l~-~~~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLY-YVKDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TTTCCCCEEEEEEESCGG-GCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCCceeEEEEeeeee-ecCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 3456899999765443 23577889999999999999998753
No 133
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.37 E-value=1.4e-12 Score=124.70 Aligned_cols=109 Identities=16% Similarity=0.202 Sum_probs=86.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC--CC-CCCeEEEEccccccCcC--CCCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP--DL-STRMFFHTTDIMNVSSA--LKDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~--gl-~~ri~f~~gDa~~l~~~--l~~f 194 (318)
..+++||+||||. |..++.+++ +.++.+|++||+|+++++.|++.+.. . |+ ..+++|+++|+.+.... .+.|
T Consensus 119 ~~~~~VLdIG~G~-G~~a~~la~-~~~~~~V~~VDis~~~l~~Ar~~~~~-~~~gl~~~rv~~~~~D~~~~l~~~~~~~f 195 (334)
T 1xj5_A 119 PNPKKVLVIGGGD-GGVLREVAR-HASIEQIDMCEIDKMVVDVSKQFFPD-VAIGYEDPRVNLVIGDGVAFLKNAAEGSY 195 (334)
T ss_dssp SCCCEEEEETCSS-SHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCHH-HHGGGGSTTEEEEESCHHHHHHTSCTTCE
T ss_pred CCCCEEEEECCCc-cHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHh-hccccCCCcEEEEECCHHHHHHhccCCCc
Confidence 5789999999995 677778886 34678999999999999999998764 2 34 46899999999875222 3589
Q ss_pred cEEEeccccCCChhH---HHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALVGMDKDE---KIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalvgm~~~~---k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+|+++...+....+ ..++++++.+.|+|||+|++..
T Consensus 196 DlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 196 DAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999987643222122 5789999999999999999974
No 134
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.37 E-value=2.4e-12 Score=114.62 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=90.0
Q ss_pred HHHHhhcCCCCcccccCCcChhhHHHhhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHH
Q 021008 80 FSSILASFENPIANLNIFPYYSNYIKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSA 159 (318)
Q Consensus 80 ~A~~l~~~~~P~~~L~~fpY~~ny~~L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~a 159 (318)
+++.......+|+....-|....+.. .-...+ ..++.+|||||||+ |..+..+++. +++|+|+|+|+.+
T Consensus 14 ~~~~~g~y~~~~~~~~~~~~~~~l~~---~~~~~~----~~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~~vD~s~~~ 82 (226)
T 3m33_A 14 LARELGGYRHPWARVLSGPDPELTFD---LWLSRL----LTPQTRVLEAGCGH-GPDAARFGPQ---AARWAAYDFSPEL 82 (226)
T ss_dssp HHHHHTTTSCCSCCEESSSCTTHHHH---HHHHHH----CCTTCEEEEESCTT-SHHHHHHGGG---SSEEEEEESCHHH
T ss_pred HHHHhchhhhhhccccCCCCHHHHHH---HHHHhc----CCCCCeEEEeCCCC-CHHHHHHHHc---CCEEEEEECCHHH
Confidence 44444455556655444444433322 222211 36789999999996 6666778864 8899999999999
Q ss_pred HHHHHHHhhcCCCCCCCeEEEEccc-cccCcC-CCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEE
Q 021008 160 NSKALSLVSSDPDLSTRMFFHTTDI-MNVSSA-LKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLM 228 (318)
Q Consensus 160 i~~Ar~~~~~~~gl~~ri~f~~gDa-~~l~~~-l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv 228 (318)
++.|++. . .+++|+++|+ ..++.. .++||+|+... +..++++++.+.|||||.++
T Consensus 83 ~~~a~~~--~-----~~~~~~~~d~~~~~~~~~~~~fD~v~~~~-------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 83 LKLARAN--A-----PHADVYEWNGKGELPAGLGAPFGLIVSRR-------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp HHHHHHH--C-----TTSEEEECCSCSSCCTTCCCCEEEEEEES-------CCSGGGGGHHHHEEEEEEEE
T ss_pred HHHHHHh--C-----CCceEEEcchhhccCCcCCCCEEEEEeCC-------CHHHHHHHHHHHcCCCcEEE
Confidence 9999987 2 4689999999 456666 56899998652 45678999999999999998
No 135
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.36 E-value=2.1e-12 Score=113.67 Aligned_cols=104 Identities=11% Similarity=0.099 Sum_probs=81.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc-cCcCCCCccEEEe
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN-VSSALKDYEVVFL 199 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~-l~~~l~~fD~V~~ 199 (318)
++.+|||+|||+ |..++.++++ ...+|+++|+|+++++.|++.++. .|+ .+++|+++|+.+ ++...+.||+|++
T Consensus 54 ~~~~vLDlgcG~-G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~-~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGS-GALGLEALSR--YAAGATLIEMDRAVSQQLIKNLAT-LKA-GNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTT-CHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHH-TTC-CSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCc-CHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHH-cCC-CcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 678999999996 5555655553 135999999999999999999988 677 789999999988 4444458999998
Q ss_pred ccccCCChhHHHHHHHHHHH--hccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAK--YMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r--~LkpGg~lv~r~ 231 (318)
+...+ .....++++.+.+ .|+|||++++..
T Consensus 129 ~~p~~--~~~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 129 DPPFR--RGLLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp CCSSS--TTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCCC--CCcHHHHHHHHHhcCccCCCcEEEEEE
Confidence 75322 3456778888866 499999998765
No 136
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.36 E-value=2e-12 Score=117.96 Aligned_cols=106 Identities=14% Similarity=0.105 Sum_probs=87.2
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC-C-CCCCeEEEEccccccCcCCCCccE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP-D-LSTRMFFHTTDIMNVSSALKDYEV 196 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~-g-l~~ri~f~~gDa~~l~~~l~~fD~ 196 (318)
..++.+|||||||. |..++.+++...++.+|+++|+|+++++.|++.++. . | +..+++++.+|+.+.+...+.||+
T Consensus 97 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~g~~~~~v~~~~~d~~~~~~~~~~~D~ 174 (280)
T 1i9g_A 97 IFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSG-CYGQPPDNWRLVVSDLADSELPDGSVDR 174 (280)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH-HHTSCCTTEEEECSCGGGCCCCTTCEEE
T ss_pred CCCCCEEEEEcccc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-hcCCCCCcEEEEECchHhcCCCCCceeE
Confidence 36788999999996 555567787555789999999999999999999887 4 3 557899999999987655568999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|+++. .+..++++++.+.|+|||.+++-..
T Consensus 175 v~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 175 AVLDM------LAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp EEEES------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred EEECC------cCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 99753 2344789999999999999988663
No 137
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.36 E-value=1.7e-12 Score=120.20 Aligned_cols=102 Identities=11% Similarity=0.046 Sum_probs=85.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
.++++|||+|||+++ -++.+|+. ++ +|+|+|+|+.+++.|+++++. .|+.++++|+++|+.+++. .+.||+|+
T Consensus 124 ~~~~~VLDlgcG~G~-~~~~la~~---~~~~V~~vD~s~~~~~~a~~n~~~-n~~~~~v~~~~~D~~~~~~-~~~fD~Vi 197 (278)
T 2frn_A 124 KPDELVVDMFAGIGH-LSLPIAVY---GKAKVIAIEKDPYTFKFLVENIHL-NKVEDRMSAYNMDNRDFPG-ENIADRIL 197 (278)
T ss_dssp CTTCEEEETTCTTTT-THHHHHHH---TCCEEEEECCCHHHHHHHHHHHHH-TTCTTTEEEECSCTTTCCC-CSCEEEEE
T ss_pred CCCCEEEEecccCCH-HHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHH-cCCCceEEEEECCHHHhcc-cCCccEEE
Confidence 668999999999755 45677774 33 799999999999999999998 7888889999999999865 45899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
++.. ....+++.++.+.|+|||.+++.+.
T Consensus 198 ~~~p-----~~~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 198 MGYV-----VRTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp ECCC-----SSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ECCc-----hhHHHHHHHHHHHCCCCeEEEEEEe
Confidence 8642 2346789999999999999998663
No 138
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.36 E-value=3.9e-12 Score=121.64 Aligned_cols=106 Identities=12% Similarity=0.134 Sum_probs=86.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++++|||||||+ |..++.+|+. +..+|+|+|+|+ +++.|++.++. .|+.++++|+++|+.+++...++||+|+.
T Consensus 65 ~~~~~VLDvGcG~-G~~~~~la~~--g~~~v~gvD~s~-~l~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~fD~Iis 139 (349)
T 3q7e_A 65 FKDKVVLDVGSGT-GILCMFAAKA--GARKVIGIECSS-ISDYAVKIVKA-NKLDHVVTIIKGKVEEVELPVEKVDIIIS 139 (349)
T ss_dssp HTTCEEEEESCTT-SHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHH-TTCTTTEEEEESCTTTCCCSSSCEEEEEE
T ss_pred CCCCEEEEEeccc-hHHHHHHHHC--CCCEEEEECcHH-HHHHHHHHHHH-cCCCCcEEEEECcHHHccCCCCceEEEEE
Confidence 5789999999996 5566778874 445999999995 99999999998 88989999999999998766679999997
Q ss_pred cccc--CCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 200 AALV--GMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 200 aalv--gm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
..+. .........++..+.+.|||||.++..
T Consensus 140 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 140 EWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 5421 113357788999999999999998743
No 139
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.36 E-value=3.9e-12 Score=118.56 Aligned_cols=109 Identities=8% Similarity=0.016 Sum_probs=83.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCC------CCCCeEEEEccccccC----c
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPD------LSTRMFFHTTDIMNVS----S 189 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~g------l~~ri~f~~gDa~~l~----~ 189 (318)
.++.+|||||||++.++ ..+++. ++.+|+|+|+|+++++.|++.... .+ ...+++|+++|+.+++ .
T Consensus 33 ~~~~~VLDlGcG~G~~~-~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 108 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDL-LKWKKG--RINKLVCTDIADVSVKQCQQRYED-MKNRRDSEYIFSAEFITADSSKELLIDKF 108 (313)
T ss_dssp --CCEEEEETCTTTTTH-HHHHHT--TCSEEEEEESCHHHHHHHHHHHHH-HHSSSCC-CCCEEEEEECCTTTSCSTTTC
T ss_pred CCCCEEEEECCCCcHHH-HHHHhc--CCCEEEEEeCCHHHHHHHHHHHHH-hhhcccccccceEEEEEecccccchhhhc
Confidence 47889999999975555 556653 588999999999999999988764 21 2357999999999875 3
Q ss_pred C--CCCccEEEeccccC-C--ChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 190 A--LKDYEVVFLAALVG-M--DKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 190 ~--l~~fD~V~~aalvg-m--~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
. .++||+|+....++ + +.++..++++++++.|||||.+++...
T Consensus 109 ~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 109 RDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp SSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 2 23899999765442 2 446678999999999999999988663
No 140
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.36 E-value=3.2e-12 Score=115.47 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=81.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC--------CCCCCeEEEEccccc-cC--
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP--------DLSTRMFFHTTDIMN-VS-- 188 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~--------gl~~ri~f~~gDa~~-l~-- 188 (318)
.++.+|||||||. |..++.+|+.. +++.|+|||+|+.+++.|++.++. . |+ .+++|+++|+.+ ++
T Consensus 48 ~~~~~vLDiGcG~-G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~-~nv~~~~~D~~~~l~~~ 123 (246)
T 2vdv_E 48 TKKVTIADIGCGF-GGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIA-LRNNTASKHGF-QNINVLRGNAMKFLPNF 123 (246)
T ss_dssp SCCEEEEEETCTT-SHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHH-HHHTC-CCSTT-TTEEEEECCTTSCGGGT
T ss_pred CCCCEEEEEcCCC-CHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHH-HhhccccccCC-CcEEEEeccHHHHHHHh
Confidence 5778999999996 55557788764 788999999999999999988765 3 55 579999999987 55
Q ss_pred cCCCCccEEEeccccCCChhH-------HHHHHHHHHHhccCCeEEEEEc
Q 021008 189 SALKDYEVVFLAALVGMDKDE-------KIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 189 ~~l~~fD~V~~aalvgm~~~~-------k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+.+.||.|++..--.+.+.. ..++++++.+.|+|||.|++..
T Consensus 124 ~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 124 FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 345589988854211111100 0479999999999999998865
No 141
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.36 E-value=1.2e-12 Score=121.63 Aligned_cols=107 Identities=11% Similarity=0.100 Sum_probs=83.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC--CC--------CCCeEEEEccccccCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP--DL--------STRMFFHTTDIMNVSS 189 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~--gl--------~~ri~f~~gDa~~l~~ 189 (318)
..+++||+||||. |..++.+++ + +..+|++||+|+++++.|++.+ . . ++ ..+++++.+|+.+...
T Consensus 74 ~~~~~VLdiG~G~-G~~~~~l~~-~-~~~~v~~vDid~~~i~~ar~~~-~-~~~~l~~~~~~~~~~~v~~~~~D~~~~l~ 148 (281)
T 1mjf_A 74 PKPKRVLVIGGGD-GGTVREVLQ-H-DVDEVIMVEIDEDVIMVSKDLI-K-IDNGLLEAMLNGKHEKAKLTIGDGFEFIK 148 (281)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTT-S-CCSEEEEEESCHHHHHHHHHHT-C-TTTTHHHHHHTTCCSSEEEEESCHHHHHH
T ss_pred CCCCeEEEEcCCc-CHHHHHHHh-C-CCCEEEEEECCHHHHHHHHHHH-h-hccccccccccCCCCcEEEEECchHHHhc
Confidence 5789999999995 666677775 4 6789999999999999999988 4 3 43 5789999999986422
Q ss_pred CCCCccEEEeccccCCCh-hH--HHHHHHHHHHhccCCeEEEEEc
Q 021008 190 ALKDYEVVFLAALVGMDK-DE--KIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 190 ~l~~fD~V~~aalvgm~~-~~--k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..+.||+|+++...+... .. ..++++.+++.|+|||++++..
T Consensus 149 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 149 NNRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp HCCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 235899999887532211 11 3679999999999999999975
No 142
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.36 E-value=3.1e-12 Score=116.34 Aligned_cols=108 Identities=12% Similarity=0.075 Sum_probs=88.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|+|||||. |.-++.+|+. .|..+|+++|+|+.+++.|+++++. .|+.++++|+.+|+.+.......||+|++
T Consensus 14 ~~g~~VlDIGtGs-G~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~-~gl~~~i~~~~~d~l~~l~~~~~~D~Ivi 90 (225)
T 3kr9_A 14 SQGAILLDVGSDH-AYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEA-HGLKEKIQVRLANGLAAFEETDQVSVITI 90 (225)
T ss_dssp CTTEEEEEETCST-THHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHH-TTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEeCCCc-HHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHH-cCCCceEEEEECchhhhcccCcCCCEEEE
Confidence 6778999999996 5666788875 4778999999999999999999999 89999999999999753222126999998
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
+.. -..--.+++++..++|+|||.|++..-.
T Consensus 91 aG~---Gg~~i~~Il~~~~~~L~~~~~lVlq~~~ 121 (225)
T 3kr9_A 91 AGM---GGRLIARILEEGLGKLANVERLILQPNN 121 (225)
T ss_dssp EEE---CHHHHHHHHHHTGGGCTTCCEEEEEESS
T ss_pred cCC---ChHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 753 2234578999999999999999996643
No 143
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.36 E-value=4.2e-12 Score=116.81 Aligned_cols=109 Identities=16% Similarity=0.098 Sum_probs=90.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||. |+-++.+|+. .+..+|+++|+|+.+++.|+++++. .|+.++++++.+|+.+...+...||+|++
T Consensus 20 ~~g~~VlDIGtGs-G~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~-~gl~~~I~v~~gD~l~~~~~~~~~D~Ivi 96 (244)
T 3gnl_A 20 TKNERIADIGSDH-AYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRS-SGLTEQIDVRKGNGLAVIEKKDAIDTIVI 96 (244)
T ss_dssp CSSEEEEEETCST-THHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHH-TTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCcc-HHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHH-cCCCceEEEEecchhhccCccccccEEEE
Confidence 6778999999997 5556788875 4677999999999999999999998 89999999999999987543336999998
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcCCC
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHG 234 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~g 234 (318)
+.. -..-=.+++++..++|++++.|++-.-.+
T Consensus 97 agm---Gg~lI~~IL~~~~~~L~~~~~lIlq~~~~ 128 (244)
T 3gnl_A 97 AGM---GGTLIRTILEEGAAKLAGVTKLILQPNIA 128 (244)
T ss_dssp EEE---CHHHHHHHHHHTGGGGTTCCEEEEEESSC
T ss_pred eCC---chHHHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 653 23556789999999999999999976433
No 144
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.36 E-value=7e-13 Score=113.02 Aligned_cols=107 Identities=9% Similarity=0.012 Sum_probs=83.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc----CCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS----ALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~----~l~~fD 195 (318)
.++.+|||+|||+ |..++.++++ +..+|+|+|+|+++++.|++.+.. .++.++++|+++|+.+... ..+.||
T Consensus 43 ~~~~~vLD~GcG~-G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 43 FDGGMALDLYSGS-GGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAI-TKEPEKFEVRKMDANRALEQFYEEKLQFD 118 (187)
T ss_dssp CSSCEEEETTCTT-CHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHH-HTCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCCEEEeCCcc-CHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHH-hCCCcceEEEECcHHHHHHHHHhcCCCCC
Confidence 4778999999996 5555666663 457999999999999999999987 6777789999999987422 245899
Q ss_pred EEEeccccCCChhHHHHHHHHH--HHhccCCeEEEEEcC
Q 021008 196 VVFLAALVGMDKDEKIRVIDHL--AKYMAPGALLMLRSA 232 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l--~r~LkpGg~lv~r~~ 232 (318)
+|+...... .....+++..+ .+.|+|||.+++...
T Consensus 119 ~i~~~~~~~--~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 119 LVLLDPPYA--KQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp EEEECCCGG--GCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EEEECCCCC--chhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 999764211 23455677777 888999999988764
No 145
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.36 E-value=3.3e-12 Score=116.26 Aligned_cols=106 Identities=14% Similarity=0.087 Sum_probs=84.5
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC--CCCccEEE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA--LKDYEVVF 198 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~--l~~fD~V~ 198 (318)
++.+|||||||+ |..++.+|++ ...+|+|+|+|+.+++.|++++.. .++.++++|+++|+.+++.. .++||+|+
T Consensus 49 ~~~~vLDlG~G~-G~~~~~la~~--~~~~v~gvDi~~~~~~~a~~n~~~-~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 49 RKGKIIDLCSGN-GIIPLLLSTR--TKAKIVGVEIQERLADMAKRSVAY-NQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp SCCEEEETTCTT-THHHHHHHTT--CCCEEEEECCSHHHHHHHHHHHHH-TTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCEEEEcCCch-hHHHHHHHHh--cCCcEEEEECCHHHHHHHHHHHHH-CCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 689999999996 5666778875 244999999999999999999998 88988999999999987643 35899999
Q ss_pred ecccc------CC-------------ChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 199 LAALV------GM-------------DKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 199 ~aalv------gm-------------~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
..--. +. ......++++.+.+.|||||++++-
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 74210 00 0123467999999999999999884
No 146
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.36 E-value=6.4e-12 Score=111.10 Aligned_cols=100 Identities=9% Similarity=0.113 Sum_probs=80.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..++++ +.+|+|+|+|+++++.|++.. .+++|+++|+.+++. .+.||+|+.
T Consensus 39 ~~~~~vLdiG~G~-G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGT-GTHLEHFTKE---FGDTAGLELSEDMLTHARKRL-------PDATLHQGDMRDFRL-GRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTT-SHHHHHHHHH---HSEEEEEESCHHHHHHHHHHC-------TTCEEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCCeEEEecccC-CHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhC-------CCCEEEECCHHHccc-CCCCcEEEE
Confidence 5779999999996 5555677765 349999999999999998764 358999999998865 458999993
Q ss_pred -c-cccCC-ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 -A-ALVGM-DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 -a-alvgm-~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
. .+.++ +.++..++++++++.|+|||.+++..
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 3 33333 34678899999999999999999975
No 147
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.35 E-value=2.7e-12 Score=112.01 Aligned_cols=100 Identities=17% Similarity=0.226 Sum_probs=81.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc---CcCCC-Ccc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV---SSALK-DYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l---~~~l~-~fD 195 (318)
.++.+|||||||+ |..+..+++. |++|+|+|+|+.+++.|++. .+++++.+|+.++ +...+ .||
T Consensus 51 ~~~~~vLdiG~G~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 51 RQPERVLDLGCGE-GWLLRALADR---GIEAVGVDGDRTLVDAARAA--------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp TCCSEEEEETCTT-CHHHHHHHTT---TCEEEEEESCHHHHHHHHHT--------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred CCCCEEEEeCCCC-CHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh--------cccccchhhHHhhcccccccCCCcc
Confidence 5779999999996 5666777763 88999999999999999876 4467889999887 44444 599
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
+|+....+. ..+..++++++++.|||||.+++...+
T Consensus 119 ~v~~~~~l~--~~~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 119 LICANFALL--HQDIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp EEEEESCCC--SSCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEEECchhh--hhhHHHHHHHHHHHhCCCeEEEEEecC
Confidence 999766544 357789999999999999999997743
No 148
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.35 E-value=2.2e-12 Score=118.63 Aligned_cols=104 Identities=17% Similarity=0.158 Sum_probs=84.9
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC-CCCCCeEEEEccccccCcCCCCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP-DLSTRMFFHTTDIMNVSSALKDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~-gl~~ri~f~~gDa~~l~~~l~~fD~V 197 (318)
..++.+|||+|||+ |..++.+++...++.+|+++|+|+++++.|++.++. . |. .+++|+++|+.+ +...+.||+|
T Consensus 108 ~~~~~~VLD~G~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~g~-~~v~~~~~d~~~-~~~~~~fD~V 183 (275)
T 1yb2_A 108 LRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSE-FYDI-GNVRTSRSDIAD-FISDQMYDAV 183 (275)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHT-TSCC-TTEEEECSCTTT-CCCSCCEEEE
T ss_pred CCCcCEEEEecCCC-CHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHh-cCCC-CcEEEEECchhc-cCcCCCccEE
Confidence 36778999999996 555567777534789999999999999999999987 5 63 689999999988 3344589999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+++. ++..++++++.+.|||||.+++-..
T Consensus 184 i~~~------~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 184 IADI------PDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp EECC------SCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred EEcC------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 9742 3456899999999999999988764
No 149
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.34 E-value=2.2e-13 Score=117.97 Aligned_cols=106 Identities=11% Similarity=0.082 Sum_probs=64.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC-----CCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL-----KDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l-----~~f 194 (318)
.++.+|||||||+ |..++.+++. .++++|+|+|+|+.+++.|++.+.. .|. +++|+++|+.+. ... ++|
T Consensus 29 ~~~~~vLDiG~G~-G~~~~~l~~~-~~~~~v~~vD~~~~~~~~a~~~~~~-~~~--~~~~~~~d~~~~-~~~~~~~~~~f 102 (215)
T 4dzr_A 29 PSGTRVIDVGTGS-GCIAVSIALA-CPGVSVTAVDLSMDALAVARRNAER-FGA--VVDWAAADGIEW-LIERAERGRPW 102 (215)
T ss_dssp CTTEEEEEEESSB-CHHHHHHHHH-CTTEEEEEEECC----------------------CCHHHHHHH-HHHHHHTTCCB
T ss_pred CCCCEEEEecCCH-hHHHHHHHHh-CCCCeEEEEECCHHHHHHHHHHHHH-hCC--ceEEEEcchHhh-hhhhhhccCcc
Confidence 5788999999996 5666778876 4789999999999999999999887 555 899999999873 332 689
Q ss_pred cEEEeccc-------cCCChhH------------------HHHHHHHHHHhccCCeE-EEEEc
Q 021008 195 EVVFLAAL-------VGMDKDE------------------KIRVIDHLAKYMAPGAL-LMLRS 231 (318)
Q Consensus 195 D~V~~aal-------vgm~~~~------------------k~~vl~~l~r~LkpGg~-lv~r~ 231 (318)
|+|+..-- ..++... ..++++++.++|||||. +++..
T Consensus 103 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 103 HAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp SEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred cEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 99997310 0111111 17899999999999999 66644
No 150
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.34 E-value=2.6e-12 Score=117.90 Aligned_cols=105 Identities=19% Similarity=0.116 Sum_probs=87.9
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||+|||+ |..++.+++...|+.+|+++|+|+++++.|+++++. .|+..+++++.+|+.+. ...+.||+|+
T Consensus 110 ~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~-~~~~~~D~V~ 186 (277)
T 1o54_A 110 VKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTK-WGLIERVTIKVRDISEG-FDEKDVDALF 186 (277)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHH-TTCGGGEEEECCCGGGC-CSCCSEEEEE
T ss_pred CCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH-cCCCCCEEEEECCHHHc-ccCCccCEEE
Confidence 36788999999997 566677887655789999999999999999999988 77778999999999886 3335799999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
++. ++..++++++.+.|+|||.+++-..
T Consensus 187 ~~~------~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 187 LDV------PDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp ECC------SCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred ECC------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 753 3445799999999999999998764
No 151
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.34 E-value=2.2e-12 Score=117.78 Aligned_cols=109 Identities=16% Similarity=0.134 Sum_probs=79.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCC-C-----------------------
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPD-L----------------------- 173 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~g-l----------------------- 173 (318)
..++.+|||||||++-++ +.+++ .|+ +|+|+|+|+.+++.|++.++...+ .
T Consensus 53 ~~~g~~vLDiGCG~G~~~-~~~~~---~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~ 128 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQ-VLAAC---DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKE 128 (263)
T ss_dssp SCCEEEEEESSCTTCCGG-GTTGG---GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHH
T ss_pred CCCCceEEEeCCCccHHH-HHHHH---hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHH
Confidence 357789999999984344 44544 365 699999999999999987654111 1
Q ss_pred ---CCCeE-EEEcccccc-Cc---CCCCccEEEecccc---CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 174 ---STRMF-FHTTDIMNV-SS---ALKDYEVVFLAALV---GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 174 ---~~ri~-f~~gDa~~l-~~---~l~~fD~V~~aalv---gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..+++ ++.+|+.+. +. ..++||+|+....+ .-+.++..++++++++.|||||.|++..
T Consensus 129 ~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 129 EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 11344 999999873 32 24589999965322 1134678899999999999999999986
No 152
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.34 E-value=6.1e-12 Score=112.23 Aligned_cols=102 Identities=13% Similarity=0.123 Sum_probs=85.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+||++|||. |..++.+++. +.+|+++|+|+++++.|++..+. .|+..+++++.+|+.+.......||+|+.
T Consensus 90 ~~~~~vldiG~G~-G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 164 (248)
T 2yvl_A 90 NKEKRVLEFGTGS-GALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKK-FNLGKNVKFFNVDFKDAEVPEGIFHAAFV 164 (248)
T ss_dssp CTTCEEEEECCTT-SHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHH-TTCCTTEEEECSCTTTSCCCTTCBSEEEE
T ss_pred CCCCEEEEeCCCc-cHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHH-cCCCCcEEEEEcChhhcccCCCcccEEEE
Confidence 6789999999995 6667778874 88999999999999999999988 78878999999999885423358999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+. .+..++++++.+.|+|||++++-..
T Consensus 165 ~~------~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 165 DV------REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp CS------SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred CC------cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 53 2446789999999999999988764
No 153
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.34 E-value=1.8e-12 Score=120.33 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=85.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcC-CCC-CCCeEEEEcccccc-CcCCCCccE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSD-PDL-STRMFFHTTDIMNV-SSALKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~-~gl-~~ri~f~~gDa~~l-~~~l~~fD~ 196 (318)
..+++||+||||. |..++.+++ +.+..+|++||+|+++++.|++.+... .++ ..|++++.+|+.+. +...+.||+
T Consensus 74 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~ 151 (275)
T 1iy9_A 74 PNPEHVLVVGGGD-GGVIREILK-HPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDV 151 (275)
T ss_dssp SSCCEEEEESCTT-CHHHHHHTT-CTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred CCCCEEEEECCch-HHHHHHHHh-CCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeE
Confidence 5789999999995 666677775 335689999999999999999987530 123 47999999999873 333358999
Q ss_pred EEeccccCCChh---HHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 197 VFLAALVGMDKD---EKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 197 V~~aalvgm~~~---~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
|+++...+.... ...++++++.+.|+|||++++....
T Consensus 152 Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 998864321110 1367999999999999999998644
No 154
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.34 E-value=1.5e-12 Score=115.23 Aligned_cols=105 Identities=12% Similarity=0.149 Sum_probs=84.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCC----CCcEEEEEeCChHHHHHHHHHhhcCCCC----CCCeEEEEccccccC--
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHL----TTTCFDNYDIDPSANSKALSLVSSDPDL----STRMFFHTTDIMNVS-- 188 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~----~ga~V~gvDid~~ai~~Ar~~~~~~~gl----~~ri~f~~gDa~~l~-- 188 (318)
..++.+||+||||+ |..+..+++... ++++|+++|+|+++++.|++.++. .++ ..+++|+++|+.+..
T Consensus 78 ~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~ 155 (227)
T 2pbf_A 78 LKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKR-DKPELLKIDNFKIIHKNIYQVNEE 155 (227)
T ss_dssp SCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHH-HCGGGGSSTTEEEEECCGGGCCHH
T ss_pred CCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHH-cCccccccCCEEEEECChHhcccc
Confidence 36789999999996 666778887643 557999999999999999999887 553 468999999998854
Q ss_pred --cCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 189 --SALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 189 --~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
...+.||+|++.+... .+++++.+.|||||++++-..
T Consensus 156 ~~~~~~~fD~I~~~~~~~-------~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 156 EKKELGLFDAIHVGASAS-------ELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHHCCEEEEEECSBBS-------SCCHHHHHHEEEEEEEEEEEE
T ss_pred cCccCCCcCEEEECCchH-------HHHHHHHHhcCCCcEEEEEEc
Confidence 3445899999876542 245778999999999988764
No 155
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.34 E-value=1.8e-12 Score=114.74 Aligned_cols=105 Identities=19% Similarity=0.102 Sum_probs=82.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCC----CCCeEEEEccccccCcCCCCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDL----STRMFFHTTDIMNVSSALKDY 194 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl----~~ri~f~~gDa~~l~~~l~~f 194 (318)
..++.+|||||||+ |..+..+++...+..+|+++|+|+.+++.|++.+.. .|. ..+++++++|+.+.+...+.|
T Consensus 75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~f 152 (226)
T 1i1n_A 75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRK-DDPTLLSSGRVQLVVGDGRMGYAEEAPY 152 (226)
T ss_dssp SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-HCTHHHHTSSEEEEESCGGGCCGGGCCE
T ss_pred CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh-hcccccCCCcEEEEECCcccCcccCCCc
Confidence 36789999999997 555567777543557999999999999999998876 554 468999999998765445589
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|+|++..... .+++++.+.|||||++++-..
T Consensus 153 D~i~~~~~~~-------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 153 DAIHVGAAAP-------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEEECSBBS-------SCCHHHHHTEEEEEEEEEEES
T ss_pred CEEEECCchH-------HHHHHHHHhcCCCcEEEEEEe
Confidence 9999776431 245678899999999988653
No 156
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.34 E-value=2.9e-12 Score=119.24 Aligned_cols=110 Identities=12% Similarity=0.163 Sum_probs=85.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCC--C-CCCeEEEEccccccC-cCCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPD--L-STRMFFHTTDIMNVS-SALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~g--l-~~ri~f~~gDa~~l~-~~l~~fD 195 (318)
..+++||+||||. |..+..+++ +.++.+|++||+|+++++.|++.+.. .+ + ..+++++.+|+.+.. ...+.||
T Consensus 77 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~a~~~~~~-~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (283)
T 2i7c_A 77 KEPKNVLVVGGGD-GGIIRELCK-YKSVENIDICEIDETVIEVSKIYFKN-ISCGYEDKRVNVFIEDASKFLENVTNTYD 153 (283)
T ss_dssp SSCCEEEEEECTT-SHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCTT-TSGGGGSTTEEEEESCHHHHHHHCCSCEE
T ss_pred CCCCeEEEEeCCc-CHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHhHH-hccccCCCcEEEEECChHHHHHhCCCCce
Confidence 5789999999996 566667775 44678999999999999999998865 32 2 478999999998742 2235899
Q ss_pred EEEeccccCCChhHH---HHHHHHHHHhccCCeEEEEEcC
Q 021008 196 VVFLAALVGMDKDEK---IRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 196 ~V~~aalvgm~~~~k---~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+|+++...+...... .++++.+++.|+|||++++...
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 999876443222222 6899999999999999999864
No 157
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.33 E-value=3.2e-12 Score=107.87 Aligned_cols=137 Identities=15% Similarity=0.093 Sum_probs=95.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++. +.+|+|+|+|+++++.|++. . .+++|+.+| ++...+.||+|+.
T Consensus 16 ~~~~~vLDiG~G~-G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~--~-----~~v~~~~~d---~~~~~~~~D~v~~ 81 (170)
T 3i9f_A 16 GKKGVIVDYGCGN-GFYCKYLLEF---ATKLYCIDINVIALKEVKEK--F-----DSVITLSDP---KEIPDNSVDFILF 81 (170)
T ss_dssp SCCEEEEEETCTT-CTTHHHHHTT---EEEEEEECSCHHHHHHHHHH--C-----TTSEEESSG---GGSCTTCEEEEEE
T ss_pred CCCCeEEEECCCC-CHHHHHHHhh---cCeEEEEeCCHHHHHHHHHh--C-----CCcEEEeCC---CCCCCCceEEEEE
Confidence 6778999999996 5556677764 35999999999999999887 2 579999999 4445568999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcCCCccc-c---cccCCCcc----ccCCcEEEEEEcCchhHHHHHHHHh
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARA-F---LYPVVDPS----DLLGFEVLSVFHPTDEVINSVVLAR 271 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~g~r~-~---lYP~v~~~----~l~gf~~~~~~~p~~~VvNsvv~ar 271 (318)
...+. ...+..++++++.+.|||||.+++.+...... . .+..++++ .+.||++..+....... ..++++
T Consensus 82 ~~~l~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gf~~~~~~~~~~~~--~~l~~~ 158 (170)
T 3i9f_A 82 ANSFH-DMDDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFSNFVVEKRFNPTPYH--FGLVLK 158 (170)
T ss_dssp ESCST-TCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTTTEEEEEEECSSTTE--EEEEEE
T ss_pred ccchh-cccCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHhCcEEEEccCCCCce--EEEEEe
Confidence 65443 22577899999999999999999876321111 1 11112222 12399987776665422 345555
Q ss_pred hc
Q 021008 272 KY 273 (318)
Q Consensus 272 k~ 273 (318)
+.
T Consensus 159 ~~ 160 (170)
T 3i9f_A 159 RK 160 (170)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 158
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.33 E-value=1.7e-13 Score=122.55 Aligned_cols=105 Identities=18% Similarity=0.146 Sum_probs=85.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+|+. |.+|+|+|+|+.+++.|++.++. .|+..+++|+++|+.+++ ....||+|+.
T Consensus 77 ~~~~~vLD~gcG~-G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~~~d~~~~~-~~~~~D~v~~ 150 (241)
T 3gdh_A 77 FKCDVVVDAFCGV-GGNTIQFALT---GMRVIAIDIDPVKIALARNNAEV-YGIADKIEFICGDFLLLA-SFLKADVVFL 150 (241)
T ss_dssp SCCSEEEETTCTT-SHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH-TTCGGGEEEEESCHHHHG-GGCCCSEEEE
T ss_pred cCCCEEEECcccc-CHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHH-cCCCcCeEEEECChHHhc-ccCCCCEEEE
Confidence 4789999999996 5666778863 79999999999999999999998 788789999999999886 3458999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....+. .......+.++++.|+|||.+++..
T Consensus 151 ~~~~~~-~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 151 SPPWGG-PDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CCCCSS-GGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCCcCC-cchhhhHHHHHHhhcCCcceeHHHH
Confidence 754332 2333446778899999999987764
No 159
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.33 E-value=2.5e-12 Score=120.84 Aligned_cols=112 Identities=14% Similarity=0.125 Sum_probs=84.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc--CCCCCCCeEEEEccccccCcC--CCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSS--DPDLSTRMFFHTTDIMNVSSA--LKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~--~~gl~~ri~f~~gDa~~l~~~--l~~fD 195 (318)
..+++||+||||. |..+..+++ +.+..+|++||+|+.+++.|++.+.. ......+++++.+|+.+.+.. .+.||
T Consensus 94 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGD-GGVLREVLR-HGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTT-SHHHHHHHT-CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCeEEEEcCCC-CHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCcee
Confidence 6789999999995 666677775 34678999999999999999998732 012347899999999886543 45899
Q ss_pred EEEeccccCCChhH---HHHHHHHHHHhccCCeEEEEEcCC
Q 021008 196 VVFLAALVGMDKDE---KIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 196 ~V~~aalvgm~~~~---k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
+|+++...+..... ..++++++++.|||||++++....
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 99987643211111 158999999999999999997643
No 160
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.33 E-value=1.1e-11 Score=117.57 Aligned_cols=105 Identities=13% Similarity=0.250 Sum_probs=87.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc-cCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN-VSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~-l~~~l~~fD~V~ 198 (318)
.++.+|||||||. |..+..+++++ ++.+++++|+ +.+++.|++.+.. .|+.++++|+.+|+.+ ++ .+||+|+
T Consensus 182 ~~~~~vLDvG~G~-G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~---~~~D~v~ 254 (360)
T 1tw3_A 182 TNVRHVLDVGGGK-GGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKD-EGLSDRVDVVEGDFFEPLP---RKADAII 254 (360)
T ss_dssp TTCSEEEEETCTT-SHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHH-TTCTTTEEEEECCTTSCCS---SCEEEEE
T ss_pred ccCcEEEEeCCcC-cHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHh-cCCCCceEEEeCCCCCCCC---CCccEEE
Confidence 5678999999996 55667788764 8899999999 9999999999988 7888899999999976 32 2599998
Q ss_pred ecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+...+ .++.++..++++++++.|+|||++++.+
T Consensus 255 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 255 LSFVLLNWPDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 76544 4555566799999999999999988765
No 161
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.32 E-value=6.9e-12 Score=114.86 Aligned_cols=110 Identities=16% Similarity=0.137 Sum_probs=84.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcC--CCCCCCeEEEEccccccC-------cC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSD--PDLSTRMFFHTTDIMNVS-------SA 190 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~--~gl~~ri~f~~gDa~~l~-------~~ 190 (318)
.++.+|||+|||+ |.-++.+|++. ++.+|+|||+|+++++.|++++... .|+.++++|+++|+.+.. ..
T Consensus 35 ~~~~~VLDlG~G~-G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 35 DRACRIADLGAGA-GAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLP 112 (260)
T ss_dssp CSCEEEEECCSSS-SHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCC
T ss_pred cCCCEEEEeCChH-hHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccC
Confidence 5678999999996 66667888764 7899999999999999999987641 356678999999998862 23
Q ss_pred CCCccEEEecc-ccC----------------CChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 191 LKDYEVVFLAA-LVG----------------MDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 191 l~~fD~V~~aa-lvg----------------m~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+.||+|+..- +.. ........+++.+.+.|||||.+++-.
T Consensus 113 ~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 45899999751 000 011235789999999999999987744
No 162
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.32 E-value=6.4e-12 Score=118.59 Aligned_cols=110 Identities=14% Similarity=0.216 Sum_probs=86.4
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||+||||++.| +.+|+.+.++++|+++|+|+.+++.+++++++ .|+. +++++++|+.+++...+.||+|+
T Consensus 116 ~~~g~~VLDlg~G~G~~t-~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~-~g~~-~v~~~~~D~~~~~~~~~~fD~Il 192 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKT-SYLAQLMRNDGVIYAFDVDENRLRETRLNLSR-LGVL-NVILFHSSSLHIGELNVEFDKIL 192 (315)
T ss_dssp CCTTCEEEECCSSCSHHH-HHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH-HTCC-SEEEESSCGGGGGGGCCCEEEEE
T ss_pred CCCCCEEEEeCCCCCHHH-HHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHH-hCCC-eEEEEECChhhcccccccCCEEE
Confidence 367889999999987666 45776543468999999999999999999988 7774 69999999998765345899999
Q ss_pred ecccc---CC-C--h---------------hHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALV---GM-D--K---------------DEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalv---gm-~--~---------------~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+++-. |+ . . ....++++++.+.|||||++++..
T Consensus 193 ~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 193 LDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp EECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 86431 11 1 1 012589999999999999998854
No 163
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.32 E-value=6.9e-12 Score=113.74 Aligned_cols=99 Identities=13% Similarity=0.123 Sum_probs=79.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++. |.+|+|+|+|+++++.|++.... .++++|+.+++...+.||+|+.
T Consensus 53 ~~~~~vLDiGcG~-G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~--------~~~~~d~~~~~~~~~~fD~v~~ 120 (260)
T 2avn_A 53 KNPCRVLDLGGGT-GKWSLFLQER---GFEVVLVDPSKEMLEVAREKGVK--------NVVEAKAEDLPFPSGAFEAVLA 120 (260)
T ss_dssp CSCCEEEEETCTT-CHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTCS--------CEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEeCCCc-CHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcCC--------CEEECcHHHCCCCCCCEEEEEE
Confidence 4788999999996 5555677763 78999999999999999987541 2899999998766678999987
Q ss_pred cc-ccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AA-LVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aa-lvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.. +.++. .+..++++++.+.|||||.+++..
T Consensus 121 ~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 121 LGDVLSYV-ENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp CSSHHHHC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhcc-ccHHHHHHHHHHHcCCCeEEEEEe
Confidence 54 33321 347889999999999999998854
No 164
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=1.5e-11 Score=103.72 Aligned_cols=98 Identities=9% Similarity=0.050 Sum_probs=82.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+++ ++.+|+|+|+|+.+++.|++.+.. .|+ .+++|+++|+.+ +...+.||+|+.
T Consensus 34 ~~~~~vLdiG~G~-G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~-~~~-~~~~~~~~d~~~-~~~~~~~D~i~~ 106 (183)
T 2yxd_A 34 NKDDVVVDVGCGS-GGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAK-FNI-KNCQIIKGRAED-VLDKLEFNKAFI 106 (183)
T ss_dssp CTTCEEEEESCCC-SHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHH-TTC-CSEEEEESCHHH-HGGGCCCSEEEE
T ss_pred CCCCEEEEeCCCC-CHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHH-cCC-CcEEEEECCccc-cccCCCCcEEEE
Confidence 6778999999996 566677776 689999999999999999999988 676 679999999987 333368999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
... ....++++++.+. |||.+++..
T Consensus 107 ~~~-----~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 107 GGT-----KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp CSC-----SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred CCc-----ccHHHHHHHHhhC--CCCEEEEEe
Confidence 763 4667899999887 999998876
No 165
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.31 E-value=1.5e-11 Score=129.54 Aligned_cols=111 Identities=14% Similarity=0.200 Sum_probs=87.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc-----CCCCCCCeEEEEccccccCcCCCCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSS-----DPDLSTRMFFHTTDIMNVSSALKDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~-----~~gl~~ri~f~~gDa~~l~~~l~~f 194 (318)
.++.+|||||||+ |..++.||+...+..+|+|||+|+.+++.|++.+.. ..|+ .+++|+++|+.+++...+.|
T Consensus 720 ~~g~rVLDVGCGT-G~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~~d~sF 797 (950)
T 3htx_A 720 SSASTLVDFGCGS-GSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDSRLHDV 797 (950)
T ss_dssp SCCSEEEEETCSS-SHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCTTSCSC
T ss_pred cCCCEEEEECCCC-CHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCcccCCe
Confidence 5789999999996 666678886432448999999999999999885542 1244 48999999999998877899
Q ss_pred cEEEecccc-CCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 195 EVVFLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 195 D~V~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
|+|+....+ +++.....++++++++.|||| .+++...+
T Consensus 798 DlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 798 DIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp CEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred eEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 999875433 556666778999999999999 77776543
No 166
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.31 E-value=2.8e-12 Score=120.83 Aligned_cols=110 Identities=13% Similarity=0.129 Sum_probs=83.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcC-CCC-CCCeEEEEcccccc-CcCCCCccE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSD-PDL-STRMFFHTTDIMNV-SSALKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~-~gl-~~ri~f~~gDa~~l-~~~l~~fD~ 196 (318)
..+++||+||||. |..++.++++ .+..+|++||+|+++++.|++.+... .++ ..+++++.+|+.+. +...+.||+
T Consensus 94 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 94 PNPRKVLIIGGGD-GGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp SSCCEEEEEECTT-SHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred CCCCEEEEECCCc-hHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceE
Confidence 5789999999995 6777778763 46789999999999999999987530 133 57899999999873 333358999
Q ss_pred EEeccccCCCh---hHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDK---DEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~---~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|++++..+... ....++++++.+.|+|||++++..
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 99876432111 124579999999999999999976
No 167
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.31 E-value=2.5e-12 Score=121.44 Aligned_cols=110 Identities=15% Similarity=0.192 Sum_probs=85.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcC-CC-C-CCCeEEEEccccc-cCcCCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSD-PD-L-STRMFFHTTDIMN-VSSALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~-~g-l-~~ri~f~~gDa~~-l~~~l~~fD 195 (318)
..+++||+||||. |..+..+++ +.++.+|++||+|+++++.|++.+... .| + ..+++++.+|+.+ ++...++||
T Consensus 76 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (314)
T 1uir_A 76 PEPKRVLIVGGGE-GATLREVLK-HPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD 153 (314)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTT-STTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred CCCCeEEEEcCCc-CHHHHHHHh-cCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCcc
Confidence 6789999999995 666677776 346789999999999999999987530 12 2 4789999999987 333345899
Q ss_pred EEEeccccCC---ChhH---HHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGM---DKDE---KIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm---~~~~---k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+++...+. .... ..++++++++.|+|||++++..
T Consensus 154 ~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998865432 1111 4789999999999999999875
No 168
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.31 E-value=8.1e-12 Score=121.03 Aligned_cols=108 Identities=12% Similarity=0.115 Sum_probs=84.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCC--CeEEEEccccccCcCCCCccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLST--RMFFHTTDIMNVSSALKDYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~--ri~f~~gDa~~l~~~l~~fD~V 197 (318)
.++.+|||+|||. |.-++.+|+++ |+++|+|+|+|+.+++.|++.++. .|+.+ +++|+.+|+.+. ...+.||+|
T Consensus 221 ~~~~~VLDlGcG~-G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~-ngl~~~~~v~~~~~D~~~~-~~~~~fD~I 296 (375)
T 4dcm_A 221 NLEGEIVDLGCGN-GVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVET-NMPEALDRCEFMINNALSG-VEPFRFNAV 296 (375)
T ss_dssp SCCSEEEEETCTT-CHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHH-HCGGGGGGEEEEECSTTTT-CCTTCEEEE
T ss_pred cCCCeEEEEeCcc-hHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHH-cCCCcCceEEEEechhhcc-CCCCCeeEE
Confidence 4558999999996 56667788764 899999999999999999999887 66654 688999999873 344589999
Q ss_pred EeccccC----CChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALVG----MDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalvg----m~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+..--.+ +......++++++.+.|||||.+++-.
T Consensus 297 i~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 297 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp EECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9753221 122344579999999999999987743
No 169
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.31 E-value=6.3e-12 Score=119.32 Aligned_cols=112 Identities=12% Similarity=0.154 Sum_probs=85.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcC-CCC-CCCeEEEEcccccc-CcCCCCccE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSD-PDL-STRMFFHTTDIMNV-SSALKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~-~gl-~~ri~f~~gDa~~l-~~~l~~fD~ 196 (318)
..+++||+||||. |..++.+++ +.++.+|+++|+|+++++.|++.+... .++ ..+++++++|+.+. +...+.||+
T Consensus 115 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDv 192 (321)
T 2pt6_A 115 KEPKNVLVVGGGD-GGIIRELCK-YKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 192 (321)
T ss_dssp SSCCEEEEEECTT-CHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCEEEEEcCCc-cHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceE
Confidence 5779999999996 566677775 446899999999999999999987651 123 47899999999873 223358999
Q ss_pred EEeccccCCChhH---HHHHHHHHHHhccCCeEEEEEcCC
Q 021008 197 VFLAALVGMDKDE---KIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 197 V~~aalvgm~~~~---k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
|+++...+..... ..++++++.+.|+|||++++....
T Consensus 193 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 193 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9987643221111 168999999999999999997643
No 170
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.30 E-value=1.9e-11 Score=120.93 Aligned_cols=108 Identities=9% Similarity=0.083 Sum_probs=84.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHH-------HHHhhcCCCCC-CCeEEEEccccccC--
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKA-------LSLVSSDPDLS-TRMFFHTTDIMNVS-- 188 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~A-------r~~~~~~~gl~-~ri~f~~gDa~~l~-- 188 (318)
..++.+|||||||. |..++.+|+.+ +..+|+|||+++++++.| ++.++. .|+. .+++|+++|....+
T Consensus 240 l~~g~~VLDLGCGs-G~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~-~Gl~~~nV~~i~gD~~~~~~~ 316 (433)
T 1u2z_A 240 LKKGDTFMDLGSGV-GNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKL-YGMRLNNVEFSLKKSFVDNNR 316 (433)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHH-TTBCCCCEEEEESSCSTTCHH
T ss_pred CCCCCEEEEeCCCc-CHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHH-cCCCCCceEEEEcCccccccc
Confidence 46789999999995 67777888754 446899999999999999 888887 7764 78999998765321
Q ss_pred --cCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 189 --SALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 189 --~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+.||+|++..... . ++..++++++.+.|||||++++-+
T Consensus 317 ~~~~~~~FDvIvvn~~l~-~-~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 317 VAELIPQCDVILVNNFLF-D-EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp HHHHGGGCSEEEECCTTC-C-HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred cccccCCCCEEEEeCccc-c-ccHHHHHHHHHHhCCCCeEEEEee
Confidence 1235899999753332 2 567788999999999999999875
No 171
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.30 E-value=1.8e-11 Score=115.94 Aligned_cols=105 Identities=14% Similarity=0.137 Sum_probs=84.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++++|||||||+ |..++.+|+. +..+|+|+|+| .+++.|++.++. .|+.++++++.+|+.+++...+.||+|+.
T Consensus 37 ~~~~~VLDiGcGt-G~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~-~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 37 FKDKIVLDVGCGT-GILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVEL-NGFSDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp HTTCEEEEETCTT-SHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHH-TTCTTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred cCCCEEEEecCcc-HHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHH-cCCCCCEEEEECchhhccCCCCcccEEEE
Confidence 5778999999996 5556677763 34599999999 599999999988 88989999999999998665568999997
Q ss_pred cccc-C-CChhHHHHHHHHHHHhccCCeEEEE
Q 021008 200 AALV-G-MDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 200 aalv-g-m~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
..+. . ........++..+.+.|||||.++.
T Consensus 112 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 112 EWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred eCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 6421 1 1234567899999999999999973
No 172
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.30 E-value=1.5e-12 Score=109.23 Aligned_cols=101 Identities=14% Similarity=0.042 Sum_probs=78.4
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC----CCCccE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA----LKDYEV 196 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~----l~~fD~ 196 (318)
++.+|||+|||. |..++.++++ +..|+|+|+|+++++.|++.+.. .++ +++|+++|+.+.... ..+||+
T Consensus 41 ~~~~vLD~GcG~-G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~-~~~--~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGS-GAVGLEAASE---GWEAVLVEKDPEAVRLLKENVRR-TGL--GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCSS-CHHHHHHHHT---TCEEEEECCCHHHHHHHHHHHHH-HTC--CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCCc-CHHHHHHHHC---CCeEEEEeCCHHHHHHHHHHHHH-cCC--ceEEEeccHHHHHHhhhccCCceEE
Confidence 788999999996 5666778763 56699999999999999999887 565 899999999873211 237999
Q ss_pred EEeccccCCChhHHHHHHHHHH--HhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLA--KYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~--r~LkpGg~lv~r~ 231 (318)
|+.....+ ....++++.+. +.|+|||.+++..
T Consensus 114 i~~~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 114 AFMAPPYA---MDLAALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp EEECCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred EEECCCCc---hhHHHHHHHHHhhcccCCCcEEEEEe
Confidence 99875322 23445666666 9999999998865
No 173
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.30 E-value=2e-11 Score=107.00 Aligned_cols=106 Identities=15% Similarity=0.078 Sum_probs=81.9
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+||+||||+ |..+..+++...++.+|+++|+|+++++.|++.+.. .|+ .+++|+.+|+.+.....+.||+|+
T Consensus 75 ~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~-~~v~~~~~d~~~~~~~~~~fD~v~ 151 (215)
T 2yxe_A 75 LKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRK-LGY-DNVIVIVGDGTLGYEPLAPYDRIY 151 (215)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH-HTC-TTEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-cCC-CCeEEEECCcccCCCCCCCeeEEE
Confidence 36788999999996 666677887643458999999999999999999887 666 459999999965433345899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEcCCC
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHG 234 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~g 234 (318)
....... +.+++.+.|||||++++-...+
T Consensus 152 ~~~~~~~-------~~~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 152 TTAAGPK-------IPEPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp ESSBBSS-------CCHHHHHTEEEEEEEEEEESSS
T ss_pred ECCchHH-------HHHHHHHHcCCCcEEEEEECCC
Confidence 7765421 1147789999999998876543
No 174
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.30 E-value=1.3e-11 Score=116.09 Aligned_cols=102 Identities=13% Similarity=0.120 Sum_probs=81.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..++.+|+....+.+|+|+|+|+++++.|++.++. .|+.+ ++|+++|+.+.+...++||+|+
T Consensus 73 ~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~g~~~-v~~~~~d~~~~~~~~~~fD~Iv 149 (317)
T 1dl5_A 73 LDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVER-LGIEN-VIFVCGDGYYGVPEFSPYDVIF 149 (317)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH-TTCCS-EEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHH-cCCCC-eEEEECChhhccccCCCeEEEE
Confidence 36789999999997 566677887642257899999999999999999987 77754 9999999998654456899999
Q ss_pred eccccC-CChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVG-MDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvg-m~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...... +. +.+.+.|||||++++..
T Consensus 150 ~~~~~~~~~--------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 150 VTVGVDEVP--------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp ECSBBSCCC--------HHHHHHEEEEEEEEEEB
T ss_pred EcCCHHHHH--------HHHHHhcCCCcEEEEEE
Confidence 776542 22 46788999999998865
No 175
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.30 E-value=1.8e-11 Score=114.53 Aligned_cols=109 Identities=16% Similarity=0.198 Sum_probs=80.2
Q ss_pred CCCCEEEEEccCC--ChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc----C--C
Q 021008 120 RFPTKIAFIGSGP--LPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS----A--L 191 (318)
Q Consensus 120 ~~~~rVL~IGsGp--lp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~----~--l 191 (318)
...++|||||||. .+.+. .+|++..|+++|++||.||.+++.||+++.. .+ ..+++|+++|+.++.. . .
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~-~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~-~~-~~~~~~v~aD~~~~~~~l~~~~~~ 153 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLH-EIAQSVAPESRVVYVDNDPIVLTLSQGLLAS-TP-EGRTAYVEADMLDPASILDAPELR 153 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHH-HHHHHHCTTCEEEEEECCHHHHHTTHHHHCC-CS-SSEEEEEECCTTCHHHHHTCHHHH
T ss_pred cCCCEEEEeCCCCCcccHHH-HHHHHHCCCCEEEEEeCChHHHHHHHHHhcc-CC-CCcEEEEEecccChhhhhcccccc
Confidence 3558999999994 24443 3454446899999999999999999998876 32 3689999999988521 0 1
Q ss_pred CCcc------EEEeccccCCChhH-HHHHHHHHHHhccCCeEEEEEc
Q 021008 192 KDYE------VVFLAALVGMDKDE-KIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 192 ~~fD------~V~~aalvgm~~~~-k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+.|| +++.+.|.+++..+ ..++++.+++.|+|||.|++..
T Consensus 154 ~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 154 DTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 2344 44444444555444 4789999999999999999875
No 176
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.30 E-value=4e-12 Score=116.99 Aligned_cols=109 Identities=16% Similarity=0.145 Sum_probs=79.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC----------------CCC---------
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP----------------DLS--------- 174 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~----------------gl~--------- 174 (318)
.++.+|||||||++. +++.+++. ++.+|+|+|+|+++++.|++.++... |..
T Consensus 70 ~~~~~vLDiGcG~G~-~~~l~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 146 (289)
T 2g72_A 70 VSGRTLIDIGSGPTV-YQLLSACS--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQ 146 (289)
T ss_dssp SCCSEEEEETCTTCC-GGGTTGGG--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred CCCCeEEEECCCcCh-HHHHhhcc--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHH
Confidence 477899999999755 55555542 47899999999999999998665311 100
Q ss_pred ---CCeEEEEccccc-cCcC-----CCCccEEEecccc-CCC--hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 175 ---TRMFFHTTDIMN-VSSA-----LKDYEVVFLAALV-GMD--KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 175 ---~ri~f~~gDa~~-l~~~-----l~~fD~V~~aalv-gm~--~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..++++.+|+.+ ++.. .++||+|+....+ ++. .++..+++++++++|||||.|++..
T Consensus 147 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 147 LRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 126788889987 5532 2359999865433 211 4578999999999999999998864
No 177
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.29 E-value=2.2e-11 Score=116.27 Aligned_cols=105 Identities=15% Similarity=0.183 Sum_probs=83.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++++|||||||. |.-++.+|+. +..+|+|+|+|+ +++.|++.++. .|+.++++++.+|+.+++.. ++||+|+.
T Consensus 49 ~~~~~VLDiGcGt-G~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~-~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs 122 (348)
T 2y1w_A 49 FKDKIVLDVGCGS-GILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKS-NNLTDRIVVIPGKVEEVSLP-EQVDIIIS 122 (348)
T ss_dssp TTTCEEEEETCTT-SHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHH-TTCTTTEEEEESCTTTCCCS-SCEEEEEE
T ss_pred CCcCEEEEcCCCc-cHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHH-cCCCCcEEEEEcchhhCCCC-CceeEEEE
Confidence 5789999999996 4555677763 456999999997 88999999988 88889999999999987533 47999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
..+. ++..+...+.+.++.+.|||||.+++.
T Consensus 123 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 123 EPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred eCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 6432 223355677888999999999999854
No 178
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.29 E-value=8.8e-12 Score=115.01 Aligned_cols=109 Identities=14% Similarity=0.059 Sum_probs=86.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCC-cEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC----CCC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTT-TCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA----LKD 193 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~g-a~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~----l~~ 193 (318)
..++.+|||+|||+++.|. .+|+.+ ++ .+|+++|+|+.+++.++++++. .|+. +++++++|+.+++.. .+.
T Consensus 81 ~~~g~~VLDlgaG~G~~t~-~la~~~-~~~~~v~avD~~~~~l~~~~~~~~~-~g~~-~v~~~~~D~~~~~~~~~~~~~~ 156 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTT-HLAQLM-KNKGTIVAVEISKTRTKALKSNINR-MGVL-NTIIINADMRKYKDYLLKNEIF 156 (274)
T ss_dssp CCTTCEEEETTCTTCHHHH-HHHHHT-TTCSEEEEEESCHHHHHHHHHHHHH-TTCC-SEEEEESCHHHHHHHHHHTTCC
T ss_pred CCCcCEEEEeCCCccHHHH-HHHHHc-CCCCEEEEECCCHHHHHHHHHHHHH-hCCC-cEEEEeCChHhcchhhhhcccc
Confidence 3678899999999877765 566643 55 8999999999999999999998 7774 899999999887542 458
Q ss_pred ccEEEecccc---CC-C-------------hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 194 YEVVFLAALV---GM-D-------------KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 194 fD~V~~aalv---gm-~-------------~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
||+|++++-. |+ . .....++++++.+.|||||++++..
T Consensus 157 fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 157 FDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp EEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 9999987422 11 0 0234789999999999999999865
No 179
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.29 E-value=2.4e-11 Score=115.72 Aligned_cols=111 Identities=14% Similarity=0.065 Sum_probs=89.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||+|||++ .-++.+|....++.+|+|+|+|+.+++.|+++++. .|+. +++|+++|+.+++.....||+|++
T Consensus 202 ~~~~~vLD~gcGsG-~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~-~g~~-~i~~~~~D~~~~~~~~~~~D~Ii~ 278 (354)
T 3tma_A 202 RPGMRVLDPFTGSG-TIALEAASTLGPTSPVYAGDLDEKRLGLAREAALA-SGLS-WIRFLRADARHLPRFFPEVDRILA 278 (354)
T ss_dssp CTTCCEEESSCTTS-HHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHH-TTCT-TCEEEECCGGGGGGTCCCCSEEEE
T ss_pred CCCCEEEeCCCCcC-HHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHH-cCCC-ceEEEeCChhhCccccCCCCEEEE
Confidence 67789999999974 55566776433679999999999999999999998 8887 999999999998776678999998
Q ss_pred ccccCCC-------hhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 200 AALVGMD-------KDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 200 aalvgm~-------~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
.--.|.. ...+.++++++.+.|+|||.+++-..+
T Consensus 279 npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 279 NPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 5322211 123478999999999999999887754
No 180
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.29 E-value=1.3e-11 Score=110.82 Aligned_cols=107 Identities=12% Similarity=0.103 Sum_probs=81.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCC-------------------------
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDL------------------------- 173 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl------------------------- 173 (318)
.++.+|||||||++ ..++.+++. +. +|+|+|+|+.+++.|++.... .+.
T Consensus 55 ~~~~~vLDlGcG~G-~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (265)
T 2i62_A 55 VKGELLIDIGSGPT-IYQLLSACE---SFTEIIVSDYTDQNLWELQKWLKK-EPGAFDWSPVVTYVCDLEGNRMKGPEKE 129 (265)
T ss_dssp CCEEEEEEESCTTC-CGGGTTGGG---TEEEEEEEESCHHHHHHHHHHHTT-CTTCCCCHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCCEEEEECCCcc-HHHHHHhhc---ccCeEEEecCCHHHHHHHHHHHhc-CCccccchhhhhhhhcccccccchHHHH
Confidence 56789999999975 444566653 55 999999999999999998875 221
Q ss_pred ---CCCe-EEEEccccccCc-CC---CCccEEEeccccC-C--ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 174 ---STRM-FFHTTDIMNVSS-AL---KDYEVVFLAALVG-M--DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 174 ---~~ri-~f~~gDa~~l~~-~l---~~fD~V~~aalvg-m--~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..++ +|+.+|+.+.+. .. +.||+|+....+. + +.++..+++++++++|||||.|++..
T Consensus 130 ~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 130 EKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 1138 999999988643 33 5899998654331 1 24578899999999999999999876
No 181
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.29 E-value=1.4e-11 Score=112.37 Aligned_cols=115 Identities=15% Similarity=0.185 Sum_probs=88.0
Q ss_pred HHhhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc
Q 021008 104 IKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD 183 (318)
Q Consensus 104 ~~L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD 183 (318)
....+.-...+.+. ..++.+|||||||+ |..++.+++. |++|+|+|+|+.+++.|+++++. .++. ++|+++|
T Consensus 104 ~~tt~~~~~~l~~~-~~~~~~VLDiGcG~-G~l~~~la~~---g~~v~gvDi~~~~v~~a~~n~~~-~~~~--v~~~~~d 175 (254)
T 2nxc_A 104 HETTRLALKALARH-LRPGDKVLDLGTGS-GVLAIAAEKL---GGKALGVDIDPMVLPQAEANAKR-NGVR--PRFLEGS 175 (254)
T ss_dssp SHHHHHHHHHHHHH-CCTTCEEEEETCTT-SHHHHHHHHT---TCEEEEEESCGGGHHHHHHHHHH-TTCC--CEEEESC
T ss_pred CHHHHHHHHHHHHh-cCCCCEEEEecCCC-cHHHHHHHHh---CCeEEEEECCHHHHHHHHHHHHH-cCCc--EEEEECC
Confidence 33344444444333 36789999999997 6666777763 56999999999999999999887 6664 9999999
Q ss_pred ccccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 184 IMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 184 a~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+.+. ...++||+|+...+ .....+++.++.+.|+|||.+++..
T Consensus 176 ~~~~-~~~~~fD~Vv~n~~----~~~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 176 LEAA-LPFGPFDLLVANLY----AELHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp HHHH-GGGCCEEEEEEECC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhc-CcCCCCCEEEECCc----HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 9873 22348999996542 3456789999999999999998854
No 182
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.29 E-value=2.6e-11 Score=112.41 Aligned_cols=102 Identities=10% Similarity=0.119 Sum_probs=78.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc----C-CCC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS----A-LKD 193 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~----~-l~~ 193 (318)
..++.+|||||||+ |..++.+|+ .|++|+|||+|+.+++.|++.+.. . ++.+|..+++. . .+.
T Consensus 43 l~~g~~VLDlGcGt-G~~a~~La~---~g~~V~gvD~S~~ml~~Ar~~~~~-~-------~v~~~~~~~~~~~~~~~~~~ 110 (261)
T 3iv6_A 43 IVPGSTVAVIGAST-RFLIEKALE---RGASVTVFDFSQRMCDDLAEALAD-R-------CVTIDLLDITAEIPKELAGH 110 (261)
T ss_dssp CCTTCEEEEECTTC-HHHHHHHHH---TTCEEEEEESCHHHHHHHHHHTSS-S-------CCEEEECCTTSCCCGGGTTC
T ss_pred CCCcCEEEEEeCcc-hHHHHHHHh---cCCEEEEEECCHHHHHHHHHHHHh-c-------cceeeeeecccccccccCCC
Confidence 36789999999996 777788887 388999999999999999998876 2 23344443322 1 248
Q ss_pred ccEEEecccc-CCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 194 YEVVFLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 194 fD~V~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
||+|+....+ ++..++..++++++.+.| |||++++....
T Consensus 111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 9999976644 456678888999999999 99999886533
No 183
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.28 E-value=8.8e-12 Score=116.78 Aligned_cols=112 Identities=10% Similarity=0.035 Sum_probs=83.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcC-CCC-CCCeEEEEcccccc-CcCCCCccE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSD-PDL-STRMFFHTTDIMNV-SSALKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~-~gl-~~ri~f~~gDa~~l-~~~l~~fD~ 196 (318)
..+++||+||||+ |..++.+++ +.+..+|++||+|+.+++.|++.+... .++ ..+++++.+|+.+. +...+.||+
T Consensus 89 ~~~~~VLdiG~G~-G~~~~~l~~-~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 166 (296)
T 1inl_A 89 PNPKKVLIIGGGD-GGTLREVLK-HDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDV 166 (296)
T ss_dssp SSCCEEEEEECTT-CHHHHHHTT-STTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred CCCCEEEEEcCCc-CHHHHHHHh-cCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceE
Confidence 5679999999996 566667775 346789999999999999999987530 123 47899999999873 333358999
Q ss_pred EEeccccC-CCh---hHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 197 VFLAALVG-MDK---DEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 197 V~~aalvg-m~~---~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
|+++...+ ... ....++++++++.|+|||++++....
T Consensus 167 Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 167 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99876321 100 02368999999999999999997643
No 184
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.28 E-value=1.6e-11 Score=119.25 Aligned_cols=105 Identities=12% Similarity=0.094 Sum_probs=85.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||+|||. |..++.++++ +++|+++|+|+.+++.|++++.. .++ +++|+++|+.+.+...+.||+|+.
T Consensus 232 ~~~~~VLDlGcG~-G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~-~~~--~v~~~~~D~~~~~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 232 VRGRQVLDLGAGY-GALTLPLARM---GAEVVGVEDDLASVLSLQKGLEA-NAL--KAQALHSDVDEALTEEARFDIIVT 304 (381)
T ss_dssp TTTCEEEEETCTT-STTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHH-TTC--CCEEEECSTTTTSCTTCCEEEEEE
T ss_pred CCCCEEEEEeeeC-CHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHH-cCC--CeEEEEcchhhccccCCCeEEEEE
Confidence 3678999999996 5556778873 78999999999999999999987 554 389999999998765568999997
Q ss_pred ccccC----CChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVG----MDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvg----m~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....+ .......++++++.+.|+|||.+++-.
T Consensus 305 npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 305 NPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 53222 124677899999999999999998854
No 185
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.28 E-value=7e-12 Score=118.38 Aligned_cols=106 Identities=12% Similarity=0.064 Sum_probs=81.5
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCC----------CCCCeEEEEccccccC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPD----------LSTRMFFHTTDIMNVS 188 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~g----------l~~ri~f~~gDa~~l~ 188 (318)
..++.+|||||||+ |..++.+|+...+..+|+++|+|+++++.|+++++. .| +..+++|+.+|+.+..
T Consensus 103 ~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~ln~~~~~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 103 INPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKH-WRDSWKLSHVEEWPDNVDFIHKDISGAT 180 (336)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHH-HHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred CCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH-hhcccccccccccCCceEEEECChHHcc
Confidence 46889999999997 555667887544668999999999999999998874 22 3478999999998863
Q ss_pred c--CCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 189 S--ALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 189 ~--~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
. ..+.||+|+++.. ....+++++.+.|+|||.+++-..
T Consensus 181 ~~~~~~~fD~V~~~~~------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 181 EDIKSLTFDAVALDML------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -------EEEEEECSS------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred cccCCCCeeEEEECCC------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 2 3347999998642 223388999999999999998664
No 186
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.28 E-value=5.8e-11 Score=113.53 Aligned_cols=105 Identities=13% Similarity=0.168 Sum_probs=87.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
....+|+|||||. |..++.+++++ |+.+++.+|. |++++.|++..+. .+ .+||+|+.+|..+.+ ..++|+|++
T Consensus 178 ~~~~~v~DvGgG~-G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~-~~-~~rv~~~~gD~~~~~--~~~~D~~~~ 250 (353)
T 4a6d_A 178 SVFPLMCDLGGGA-GALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSF-QE-EEQIDFQEGDFFKDP--LPEADLYIL 250 (353)
T ss_dssp GGCSEEEEETCTT-SHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC----CCSEEEEESCTTTSC--CCCCSEEEE
T ss_pred ccCCeEEeeCCCC-CHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhh-cc-cCceeeecCccccCC--CCCceEEEe
Confidence 5668999999995 66677888876 9999999998 8899999998875 44 689999999998643 347899998
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++.++..++|+++++.|+|||+|++.+
T Consensus 251 ~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e 283 (353)
T 4a6d_A 251 ARVLHDWADGKCSHLLERIYHTCKPGGGILVIE 283 (353)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred eeecccCCHHHHHHHHHHHHhhCCCCCEEEEEE
Confidence 7644 5677777899999999999999998866
No 187
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.28 E-value=2.9e-11 Score=111.00 Aligned_cols=107 Identities=16% Similarity=0.240 Sum_probs=84.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+|+.+ ++++|+++|+|+.+++.|++++.. .|+. +++|+++|+.+.. ..+.||+|+.
T Consensus 108 ~~~~~vLDlG~Gs-G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~-~~~~-~v~~~~~d~~~~~-~~~~fD~Iv~ 182 (276)
T 2b3t_A 108 EQPCRILDLGTGT-GAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQH-LAIK-NIHILQSDWFSAL-AGQQFAMIVS 182 (276)
T ss_dssp SSCCEEEEETCTT-SHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHH-HTCC-SEEEECCSTTGGG-TTCCEEEEEE
T ss_pred cCCCEEEEecCCc-cHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHH-cCCC-ceEEEEcchhhhc-ccCCccEEEE
Confidence 4678999999996 55567788654 899999999999999999999987 6764 7999999998742 2358999997
Q ss_pred cc-ccCC-------------C----------hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AA-LVGM-------------D----------KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aa-lvgm-------------~----------~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.. +++. + .....++++++.+.|+|||.+++..
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 52 1110 0 1356789999999999999999864
No 188
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.27 E-value=1.7e-11 Score=116.35 Aligned_cols=103 Identities=13% Similarity=0.167 Sum_probs=81.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++++ |+.+++++|+ +.++. ++..+. .++.++++|+.+|..+ +.. +||+|++
T Consensus 183 ~~~~~vLDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~--~~~~~~-~~~~~~v~~~~~d~~~-~~p--~~D~v~~ 253 (348)
T 3lst_A 183 PATGTVADVGGGR-GGFLLTVLREH-PGLQGVLLDR-AEVVA--RHRLDA-PDVAGRWKVVEGDFLR-EVP--HADVHVL 253 (348)
T ss_dssp CSSEEEEEETCTT-SHHHHHHHHHC-TTEEEEEEEC-HHHHT--TCCCCC-GGGTTSEEEEECCTTT-CCC--CCSEEEE
T ss_pred cCCceEEEECCcc-CHHHHHHHHHC-CCCEEEEecC-HHHhh--cccccc-cCCCCCeEEEecCCCC-CCC--CCcEEEE
Confidence 6778999999996 66667788765 8999999999 55555 444444 5778899999999963 222 8999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++.++..++++++++.|||||+|++.+
T Consensus 254 ~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 254 KRILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred ehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 6544 4565666899999999999999998866
No 189
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.27 E-value=5.1e-11 Score=111.02 Aligned_cols=113 Identities=16% Similarity=0.186 Sum_probs=84.8
Q ss_pred CCCEEEEEccCCChH----HHHHHHHhCC--C-CcEEEEEeCChHHHHHHHHHhhc--------------------CC--
Q 021008 121 FPTKIAFIGSGPLPL----TSIVLAINHL--T-TTCFDNYDIDPSANSKALSLVSS--------------------DP-- 171 (318)
Q Consensus 121 ~~~rVL~IGsGplp~----tai~LA~~~~--~-ga~V~gvDid~~ai~~Ar~~~~~--------------------~~-- 171 (318)
++.||+++|||+ |- -++.|++... + +++|+|+|||+++++.|++.+-. ..
T Consensus 105 ~~~rIld~GCgT-Gee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~ 183 (274)
T 1af7_A 105 GEYRVWSAAAST-GEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHE 183 (274)
T ss_dssp SCEEEEESCCTT-THHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSC
T ss_pred CCcEEEEeeccC-ChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCC
Confidence 457999999996 44 2455665421 1 58999999999999999986410 00
Q ss_pred -------CCCCCeEEEEccccccCcC-CCCccEEEeccc-cCCChhHHHHHHHHHHHhccCCeEEEEEcCCC
Q 021008 172 -------DLSTRMFFHTTDIMNVSSA-LKDYEVVFLAAL-VGMDKDEKIRVIDHLAKYMAPGALLMLRSAHG 234 (318)
Q Consensus 172 -------gl~~ri~f~~gDa~~l~~~-l~~fD~V~~aal-vgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~g 234 (318)
++.++|+|.++|+.+.+.. .+.||+|+.... ..++.+.+.++++.+++.|+|||.|++..+..
T Consensus 184 ~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE~ 255 (274)
T 1af7_A 184 GLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSEN 255 (274)
T ss_dssp SEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTCC
T ss_pred CceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEeccc
Confidence 0124799999999986543 358999997553 35577888999999999999999999966544
No 190
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.26 E-value=2.1e-11 Score=113.56 Aligned_cols=108 Identities=14% Similarity=0.234 Sum_probs=84.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCc---cE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDY---EV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~f---D~ 196 (318)
.++.+|||||||+ |.-++.+|+. ++++|+|+|+|+++++.|++++.. .|+.++++|+++|+.+... +.| |+
T Consensus 122 ~~~~~vLDlG~Gs-G~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~-~~l~~~v~~~~~D~~~~~~--~~f~~~D~ 195 (284)
T 1nv8_A 122 YGIKTVADIGTGS-GAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAER-HGVSDRFFVRKGEFLEPFK--EKFASIEM 195 (284)
T ss_dssp HTCCEEEEESCTT-SHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHH-TTCTTSEEEEESSTTGGGG--GGTTTCCE
T ss_pred cCCCEEEEEeCch-hHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHH-cCCCCceEEEECcchhhcc--cccCCCCE
Confidence 3668999999996 5666788875 899999999999999999999998 8888899999999987422 368 99
Q ss_pred EEecc-ccC----C-------C------hhHHHHHHHHHH-HhccCCeEEEEEcCC
Q 021008 197 VFLAA-LVG----M-------D------KDEKIRVIDHLA-KYMAPGALLMLRSAH 233 (318)
Q Consensus 197 V~~aa-lvg----m-------~------~~~k~~vl~~l~-r~LkpGg~lv~r~~~ 233 (318)
|+..- .++ + + ..+...+++++. +.++|||.+++..++
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 98741 000 0 0 011237899999 999999999986543
No 191
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.26 E-value=3.3e-11 Score=109.89 Aligned_cols=104 Identities=11% Similarity=0.102 Sum_probs=75.9
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc--C-CCCcc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS--A-LKDYE 195 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~--~-l~~fD 195 (318)
..++.+|||+||||++.| ..+|+...++++|+++|+++.+++...+.++. . .++.++++|+..... . ...||
T Consensus 74 l~~g~~VLDlG~GtG~~t-~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-r---~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTI-SHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-R---PNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CCTTCEEEEETCTTSHHH-HHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-C---TTEEEEECCTTCGGGTTTTCCCEE
T ss_pred CCCCCEEEEEeecCCHHH-HHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-c---CCeEEEEcccccchhhhccccceE
Confidence 468899999999985544 56777655688999999999987655554444 1 579999999986431 1 24899
Q ss_pred EEEeccccCCChhHHHHHH-HHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGMDKDEKIRVI-DHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl-~~l~r~LkpGg~lv~r~ 231 (318)
+||.+... .+..+++ ..+.+.|||||.|++--
T Consensus 149 ~I~~d~a~----~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 149 VLYVDIAQ----PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp EEEECCCC----TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEecCCC----hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 99987532 3444444 45556999999998763
No 192
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.26 E-value=4.8e-11 Score=105.65 Aligned_cols=99 Identities=16% Similarity=0.096 Sum_probs=78.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |..+..+++. +.+|+|+|+|+++++.|++.... .| +++|+++|+.+.....++||+|+
T Consensus 68 ~~~~~~vLdiG~G~-G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~-~~---~v~~~~~d~~~~~~~~~~fD~v~ 139 (231)
T 1vbf_A 68 LHKGQKVLEIGTGI-GYYTALIAEI---VDKVVSVEINEKMYNYASKLLSY-YN---NIKLILGDGTLGYEEEKPYDRVV 139 (231)
T ss_dssp CCTTCEEEEECCTT-SHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHTT-CS---SEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCCCEEEEEcCCC-CHHHHHHHHH---cCEEEEEeCCHHHHHHHHHHHhh-cC---CeEEEECCcccccccCCCccEEE
Confidence 36788999999996 5666678764 48999999999999999999887 44 89999999987333345899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
....+.. +.+++.+.|+|||++++...
T Consensus 140 ~~~~~~~-------~~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 140 VWATAPT-------LLCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp ESSBBSS-------CCHHHHHTEEEEEEEEEEEC
T ss_pred ECCcHHH-------HHHHHHHHcCCCcEEEEEEc
Confidence 7764421 12357899999999988764
No 193
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.25 E-value=3.4e-11 Score=115.98 Aligned_cols=101 Identities=13% Similarity=0.065 Sum_probs=81.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc-cCcC-CCCccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN-VSSA-LKDYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~-l~~~-l~~fD~V 197 (318)
.++++||||| |+ |..++.+|+. .++.+|+++|+|+.+++.|+++++. .|+. +++|+.+|+.+ ++.. .++||+|
T Consensus 171 ~~~~~VLDlG-G~-G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~-~g~~-~v~~~~~D~~~~l~~~~~~~fD~V 245 (373)
T 2qm3_A 171 LENKDIFVLG-DD-DLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANE-IGYE-DIEIFTFDLRKPLPDYALHKFDTF 245 (373)
T ss_dssp STTCEEEEES-CT-TCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHH-HTCC-CEEEECCCTTSCCCTTTSSCBSEE
T ss_pred CCCCEEEEEC-CC-CHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHH-cCCC-CEEEEEChhhhhchhhccCCccEE
Confidence 4679999999 96 5566777764 3567999999999999999999988 7776 89999999998 7642 3489999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEE
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALL 227 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~l 227 (318)
+++...+ ...-.++++++.+.|||||++
T Consensus 246 i~~~p~~--~~~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 246 ITDPPET--LEAIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp EECCCSS--HHHHHHHHHHHHHTBCSTTCE
T ss_pred EECCCCc--hHHHHHHHHHHHHHcccCCeE
Confidence 9875332 123478999999999999943
No 194
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.25 E-value=8.7e-12 Score=112.58 Aligned_cols=109 Identities=17% Similarity=0.149 Sum_probs=82.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhC-CCCcEEEEEeCChHHHHHHHHHhhcCC---CCCCC-------------------
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINH-LTTTCFDNYDIDPSANSKALSLVSSDP---DLSTR------------------- 176 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~-~~ga~V~gvDid~~ai~~Ar~~~~~~~---gl~~r------------------- 176 (318)
.++.+|||+|||+ |..++.+++.. .++.+|+|+|+|+.+++.|++.+.. . ++..+
T Consensus 50 ~~~~~vLD~gcGs-G~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 50 DGPVTLWDPCCGS-GYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLAL-LSPAGLTARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp CSCEEEEETTCTT-SHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHT-TSHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCCeEEECCCCC-CHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHH-hhhccccccchhhhhhhhhcccccchhh
Confidence 3678999999996 56667777651 2678999999999999999988876 4 44333
Q ss_pred ------eE-------------EEEccccccCc-----CCCCccEEEecc-ccCCC-------hhHHHHHHHHHHHhccCC
Q 021008 177 ------MF-------------FHTTDIMNVSS-----ALKDYEVVFLAA-LVGMD-------KDEKIRVIDHLAKYMAPG 224 (318)
Q Consensus 177 ------i~-------------f~~gDa~~l~~-----~l~~fD~V~~aa-lvgm~-------~~~k~~vl~~l~r~LkpG 224 (318)
++ |+++|+.+... ....||+|+..- +.... .....++++++.+.|+||
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 77 99999987532 223899998642 11111 256779999999999999
Q ss_pred eEEEEE
Q 021008 225 ALLMLR 230 (318)
Q Consensus 225 g~lv~r 230 (318)
|.+++.
T Consensus 208 G~l~~~ 213 (250)
T 1o9g_A 208 AVIAVT 213 (250)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 999983
No 195
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.25 E-value=1.9e-11 Score=107.92 Aligned_cols=93 Identities=13% Similarity=0.121 Sum_probs=75.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
++.+|||||||++ ..+..+++ . +|+|+|+++++.|++. +++++++|+.+++...+.||+|+..
T Consensus 47 ~~~~vLDiG~G~G-~~~~~l~~----~---~~vD~s~~~~~~a~~~---------~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 47 PEGRGVEIGVGTG-RFAVPLKI----K---IGVEPSERMAEIARKR---------GVFVLKGTAENLPLKDESFDFALMV 109 (219)
T ss_dssp CSSCEEEETCTTS-TTHHHHTC----C---EEEESCHHHHHHHHHT---------TCEEEECBTTBCCSCTTCEEEEEEE
T ss_pred CCCcEEEeCCCCC-HHHHHHHH----H---hccCCCHHHHHHHHhc---------CCEEEEcccccCCCCCCCeeEEEEc
Confidence 4899999999974 44556654 1 9999999999999875 5789999999887666689999976
Q ss_pred cccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 201 ALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 201 alvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..+. ...+..++++++.+.|+|||.+++..
T Consensus 110 ~~l~-~~~~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 110 TTIC-FVDDPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp SCGG-GSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chHh-hccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 5442 12466889999999999999998875
No 196
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.24 E-value=2e-11 Score=116.48 Aligned_cols=107 Identities=17% Similarity=0.112 Sum_probs=83.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCC-CeEEEEccccccCcC----CCCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLST-RMFFHTTDIMNVSSA----LKDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~-ri~f~~gDa~~l~~~----l~~f 194 (318)
.++.+|||+|||++ .-++.+|+ .|++|++||+|+.+++.|+++++. .|+.+ +++|+++|+.+.... ...|
T Consensus 152 ~~~~~VLDlgcGtG-~~sl~la~---~ga~V~~VD~s~~al~~a~~n~~~-~gl~~~~v~~i~~D~~~~l~~~~~~~~~f 226 (332)
T 2igt_A 152 DRPLKVLNLFGYTG-VASLVAAA---AGAEVTHVDASKKAIGWAKENQVL-AGLEQAPIRWICEDAMKFIQREERRGSTY 226 (332)
T ss_dssp SSCCEEEEETCTTC-HHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHH-HTCTTSCEEEECSCHHHHHHHHHHHTCCB
T ss_pred CCCCcEEEcccccC-HHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHH-cCCCccceEEEECcHHHHHHHHHhcCCCc
Confidence 46789999999975 45567776 377999999999999999999987 77766 699999999886432 3489
Q ss_pred cEEEeccc-cCC--------ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAAL-VGM--------DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aal-vgm--------~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+|+++-- .+. ...+..++++.+.+.|+|||.+++-.
T Consensus 227 D~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 227 DIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp SEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred eEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 99987421 010 12456789999999999999976644
No 197
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.24 E-value=2.1e-11 Score=112.63 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=83.9
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++++|||+|||++++ ++.+|++. ++++|+|+|+|+++++.|+++++. .|+ .++.|+++|+.+.+ ....||+|+
T Consensus 117 ~~~~~~VLDlgcG~G~~-s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~-n~l-~~~~~~~~d~~~~~-~~~~~D~Vi 191 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYF-TIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKL-NKL-NNVIPILADNRDVE-LKDVADRVI 191 (272)
T ss_dssp CCTTCEEEETTCTTTTT-HHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHH-TTC-SSEEEEESCGGGCC-CTTCEEEEE
T ss_pred cCCCCEEEEecCcCCHH-HHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHH-cCC-CCEEEEECChHHcC-ccCCceEEE
Confidence 36789999999997554 56788753 577999999999999999999987 677 46889999999883 345899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
++.. ....+++..+.+.|+|||++++..
T Consensus 192 ~d~p-----~~~~~~l~~~~~~LkpgG~l~~s~ 219 (272)
T 3a27_A 192 MGYV-----HKTHKFLDKTFEFLKDRGVIHYHE 219 (272)
T ss_dssp ECCC-----SSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ECCc-----ccHHHHHHHHHHHcCCCCEEEEEE
Confidence 8752 144568899999999999998755
No 198
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.23 E-value=1.2e-11 Score=111.66 Aligned_cols=107 Identities=14% Similarity=0.045 Sum_probs=75.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc-C--cC---CCCc
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV-S--SA---LKDY 194 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l-~--~~---l~~f 194 (318)
++.+|||||||++.++ +.+|++. ++++|+|+|+|+++++.|++.++. .|+.++++|+++|+.+. . .. .+.|
T Consensus 65 ~~~~vLDlG~G~G~~~-~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIY-PLLGATL-NGWYFLATEVDDMCFNYAKKNVEQ-NNLSDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHH-HHHHHHH-HCCEEEEEESCHHHHHHHHHHHHH-TTCTTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHH-HHHHHhC-CCCeEEEEECCHHHHHHHHHHHHH-cCCCccEEEEEcchhhhhhhhhhcccCCcc
Confidence 5789999999975554 5566653 689999999999999999999988 78888999999998762 1 22 1479
Q ss_pred cEEEecc-ccCCC-------------hhHHHHHHHHHHHhccCCeEEEEE
Q 021008 195 EVVFLAA-LVGMD-------------KDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 195 D~V~~aa-lvgm~-------------~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
|+|+..- +.... .+++..++..++++|||||.+.+-
T Consensus 142 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp SEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred cEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 9998752 11111 023446778889999999977553
No 199
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.23 E-value=8.2e-12 Score=115.41 Aligned_cols=99 Identities=12% Similarity=0.058 Sum_probs=79.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC--CC-CCCeEEEEccccccCcCCCCccE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP--DL-STRMFFHTTDIMNVSSALKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~--gl-~~ri~f~~gDa~~l~~~l~~fD~ 196 (318)
..++|||+||||. |.++..+++ + + .+|+++|+|+++++.|++.+.. . ++ ..|++++.+|+.+.. ++||+
T Consensus 71 ~~~~~VL~iG~G~-G~~~~~ll~-~-~-~~v~~veid~~~i~~ar~~~~~-~~~~~~~~rv~~~~~D~~~~~---~~fD~ 142 (262)
T 2cmg_A 71 KELKEVLIVDGFD-LELAHQLFK-Y-D-THIDFVQADEKILDSFISFFPH-FHEVKNNKNFTHAKQLLDLDI---KKYDL 142 (262)
T ss_dssp SCCCEEEEESSCC-HHHHHHHTT-S-S-CEEEEECSCHHHHGGGTTTSTT-HHHHHTCTTEEEESSGGGSCC---CCEEE
T ss_pred CCCCEEEEEeCCc-CHHHHHHHh-C-C-CEEEEEECCHHHHHHHHHHHHh-hccccCCCeEEEEechHHHHH---hhCCE
Confidence 5779999999995 677676775 4 5 8999999999999999987643 1 12 468999999998864 68999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|++++. + ...+++.+.+.|+|||++++...
T Consensus 143 Ii~d~~---d---p~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 143 IFCLQE---P---DIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp EEESSC---C---CHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEECCC---C---hHHHHHHHHHhcCCCcEEEEEcC
Confidence 998852 1 23499999999999999999653
No 200
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.21 E-value=5.2e-11 Score=118.99 Aligned_cols=104 Identities=15% Similarity=0.185 Sum_probs=83.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++++|||||||. |.-++.+|+. +..+|+|+|+|+ +++.|++.++. .|+.++++|+.+|+.+++.. ++||+|+.
T Consensus 157 ~~~~~VLDiGcGt-G~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~-~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs 230 (480)
T 3b3j_A 157 FKDKIVLDVGCGS-GILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKS-NNLTDRIVVIPGKVEEVSLP-EQVDIIIS 230 (480)
T ss_dssp TTTCEEEEESCST-THHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHH-TTCTTTEEEEESCTTTCCCS-SCEEEEEC
T ss_pred cCCCEEEEecCcc-cHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHH-cCCCCcEEEEECchhhCccC-CCeEEEEE
Confidence 5678999999996 5556677762 567999999999 99999999998 88989999999999986432 47999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
..+. .+..+...+.+.++.+.|||||.+++
T Consensus 231 ~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 231 EPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred eCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 5431 11235567788899999999999985
No 201
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.20 E-value=4.1e-11 Score=104.66 Aligned_cols=97 Identities=13% Similarity=0.180 Sum_probs=76.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc--cCcCCCCccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN--VSSALKDYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~--l~~~l~~fD~V 197 (318)
.++.+|||||||+ |..+..+++. +.+|+|+|+|+.+++.|++.. .+++++|+.+ .+...+.||+|
T Consensus 31 ~~~~~vLdiG~G~-G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~---------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCSS-GALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL---------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCTT-SHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS---------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCCC-CHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC---------CcEEEcchhhcCCCCCCCccCEE
Confidence 5789999999996 5555677763 699999999999999998643 2688999986 44444689999
Q ss_pred Eecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+....+ ++ .+..++++++.+.|+|||.+++..
T Consensus 98 ~~~~~l~~~--~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 98 IFGDVLEHL--FDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp EEESCGGGS--SCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred EECChhhhc--CCHHHHHHHHHHHcCCCCEEEEEe
Confidence 976543 33 355789999999999999998865
No 202
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.20 E-value=3.1e-11 Score=114.81 Aligned_cols=105 Identities=10% Similarity=0.144 Sum_probs=84.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||. |.-++.+++. .++++|+++|+|+.+++.|++.+.. .++. ++++.+|+.+.+ .++||+|+.
T Consensus 195 ~~~~~VLDlGcG~-G~~~~~la~~-~~~~~v~~vD~s~~~l~~a~~~~~~-~~~~--~~~~~~d~~~~~--~~~fD~Iv~ 267 (343)
T 2pjd_A 195 HTKGKVLDVGCGA-GVLSVAFARH-SPKIRLTLCDVSAPAVEASRATLAA-NGVE--GEVFASNVFSEV--KGRFDMIIS 267 (343)
T ss_dssp TCCSBCCBTTCTT-SHHHHHHHHH-CTTCBCEEEESBHHHHHHHHHHHHH-TTCC--CEEEECSTTTTC--CSCEEEEEE
T ss_pred CCCCeEEEecCcc-CHHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHH-hCCC--CEEEEccccccc--cCCeeEEEE
Confidence 4678999999996 5666778876 3778999999999999999999987 5553 678999998753 458999997
Q ss_pred ccccCC----ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGM----DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm----~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....+. +.....++++++++.|||||.+++-.
T Consensus 268 ~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 268 NPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp CCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 643321 24567899999999999999988765
No 203
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.18 E-value=1.5e-10 Score=103.54 Aligned_cols=102 Identities=13% Similarity=0.097 Sum_probs=78.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC-CCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL-KDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l-~~fD~V 197 (318)
..++.+||+||||. |..++.+++.. + .+|+++|+|+++++.|++.+.. .|+. +++|+.+|+.. +... ..||+|
T Consensus 89 ~~~~~~vLdiG~G~-G~~~~~la~~~-~-~~v~~vD~~~~~~~~a~~~~~~-~~~~-~v~~~~~d~~~-~~~~~~~fD~I 162 (235)
T 1jg1_A 89 LKPGMNILEVGTGS-GWNAALISEIV-K-TDVYTIERIPELVEFAKRNLER-AGVK-NVHVILGDGSK-GFPPKAPYDVI 162 (235)
T ss_dssp CCTTCCEEEECCTT-SHHHHHHHHHH-C-SCEEEEESCHHHHHHHHHHHHH-TTCC-SEEEEESCGGG-CCGGGCCEEEE
T ss_pred CCCCCEEEEEeCCc-CHHHHHHHHHh-C-CEEEEEeCCHHHHHHHHHHHHH-cCCC-CcEEEECCccc-CCCCCCCccEE
Confidence 36788999999995 66677788753 3 8999999999999999999987 7774 49999999832 2222 359999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
++...... +.+++.+.|+|||++++-...
T Consensus 163 i~~~~~~~-------~~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 163 IVTAGAPK-------IPEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp EECSBBSS-------CCHHHHHTEEEEEEEEEEECS
T ss_pred EECCcHHH-------HHHHHHHhcCCCcEEEEEEec
Confidence 97764421 123678999999999887654
No 204
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.17 E-value=2.1e-10 Score=106.05 Aligned_cols=105 Identities=18% Similarity=0.172 Sum_probs=77.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeC-ChHHHHHHHHHh-----hcCCCCC----CCeEEEEccccccC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDI-DPSANSKALSLV-----SSDPDLS----TRMFFHTTDIMNVS 188 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDi-d~~ai~~Ar~~~-----~~~~gl~----~ri~f~~gDa~~l~ 188 (318)
.++++|||||||. |..++.+|+. |+ +|+++|+ |+++++.|++++ +. .|+. .+++++..|..+..
T Consensus 78 ~~~~~vLDlG~G~-G~~~~~~a~~---~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~-~~~~~~~~~~v~~~~~~~~~~~ 152 (281)
T 3bzb_A 78 IAGKTVCELGAGA-GLVSIVAFLA---GADQVVATDYPDPEILNSLESNIREHTANS-CSSETVKRASPKVVPYRWGDSP 152 (281)
T ss_dssp TTTCEEEETTCTT-SHHHHHHHHT---TCSEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEEECCTTSCT
T ss_pred cCCCeEEEecccc-cHHHHHHHHc---CCCEEEEEeCCCHHHHHHHHHHHHHhhhhh-cccccCCCCCeEEEEecCCCcc
Confidence 5778999999995 6777788863 55 9999999 899999999998 55 5554 58999876654321
Q ss_pred c------CCCCccEEEeccccCCChhHHHHHHHHHHHhcc---C--CeEEEEE
Q 021008 189 S------ALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMA---P--GALLMLR 230 (318)
Q Consensus 189 ~------~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~Lk---p--Gg~lv~r 230 (318)
. ..+.||+|+.+..+. ..+....+++.+.+.|+ | ||++++-
T Consensus 153 ~~~~~~~~~~~fD~Ii~~dvl~-~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 153 DSLQRCTGLQRFQVVLLADLLS-FHQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHHHHHSCSSBSEEEEESCCS-CGGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred HHHHhhccCCCCCEEEEeCccc-ChHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 1 235899998754332 45678899999999999 9 9986653
No 205
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.17 E-value=8.3e-11 Score=109.99 Aligned_cols=113 Identities=11% Similarity=0.044 Sum_probs=88.1
Q ss_pred HHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc
Q 021008 108 QLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV 187 (318)
Q Consensus 108 ~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l 187 (318)
..|..++... ..++++|||+|||.++++ +.+|++ ..++|+++|+||.+++.++++++. -|+.++++++++|+.++
T Consensus 113 ~~er~ri~~~-~~~g~~VlD~~aG~G~~~-i~~a~~--g~~~V~avD~np~a~~~~~~N~~~-N~v~~~v~~~~~D~~~~ 187 (278)
T 3k6r_A 113 VKERVRMAKV-AKPDELVVDMFAGIGHLS-LPIAVY--GKAKVIAIEKDPYTFKFLVENIHL-NKVEDRMSAYNMDNRDF 187 (278)
T ss_dssp HHHHHHHHHH-CCTTCEEEETTCTTTTTT-HHHHHH--TCCEEEEECCCHHHHHHHHHHHHH-TTCTTTEEEECSCTTTC
T ss_pred HHHHHHHHHh-cCCCCEEEEecCcCcHHH-HHHHHh--cCCeEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEeCcHHHh
Confidence 3444444332 378999999999976666 567764 357999999999999999999998 89999999999999997
Q ss_pred CcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 188 SSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 188 ~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+. .+.||.|++.-. ....+++....+.++|||.+.+..
T Consensus 188 ~~-~~~~D~Vi~~~p-----~~~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 188 PG-ENIADRILMGYV-----VRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp CC-CSCEEEEEECCC-----SSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cc-ccCCCEEEECCC-----CcHHHHHHHHHHHcCCCCEEEEEe
Confidence 64 358999886642 122457788889999999986643
No 206
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.17 E-value=1.7e-10 Score=110.83 Aligned_cols=98 Identities=10% Similarity=0.179 Sum_probs=79.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.+..+|||||||+ |..++.+++++ |+.+++++|+ |++++.|++ ..+++|+.+|..+ +... . |+|++
T Consensus 202 ~~~~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~--------~~~v~~~~~d~~~-~~p~-~-D~v~~ 267 (368)
T 3reo_A 202 EGLTTIVDVGGGT-GAVASMIVAKY-PSINAINFDL-PHVIQDAPA--------FSGVEHLGGDMFD-GVPK-G-DAIFI 267 (368)
T ss_dssp TTCSEEEEETCTT-SHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC--------CTTEEEEECCTTT-CCCC-C-SEEEE
T ss_pred cCCCEEEEeCCCc-CHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh--------cCCCEEEecCCCC-CCCC-C-CEEEE
Confidence 4568999999996 66677888775 9999999999 888876642 1689999999986 3332 3 99987
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++.++..++|+++++.|||||+|++.+
T Consensus 268 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 268 KWICHDWSDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp ESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 6654 4566777899999999999999998876
No 207
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.16 E-value=3.9e-11 Score=106.60 Aligned_cols=106 Identities=13% Similarity=0.108 Sum_probs=80.1
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCC-----CcEEEEEeCChHHHHHHHHHhhcCCCC----CCCeEEEEccccccCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLT-----TTCFDNYDIDPSANSKALSLVSSDPDL----STRMFFHTTDIMNVSS 189 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~-----ga~V~gvDid~~ai~~Ar~~~~~~~gl----~~ri~f~~gDa~~l~~ 189 (318)
..++.+|||||||+ |..+..+|+.... ..+|+++|+++++++.|++.+.. .|. ..+++|+++|+.+...
T Consensus 82 ~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~~~~~v~~~~~d~~~~~~ 159 (227)
T 1r18_A 82 LKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNT-DDRSMLDSGQLLIVEGDGRKGYP 159 (227)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHH-HHHHHHHHTSEEEEESCGGGCCG
T ss_pred CCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHh-cCccccCCCceEEEECCcccCCC
Confidence 36778999999997 6666677774311 25999999999999999998876 441 3689999999987322
Q ss_pred CCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 190 ALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 190 ~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
+.+.||+|++.+... .+.+++.+.|||||++++-...
T Consensus 160 ~~~~fD~I~~~~~~~-------~~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 160 PNAPYNAIHVGAAAP-------DTPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GGCSEEEEEECSCBS-------SCCHHHHHTEEEEEEEEEEESC
T ss_pred cCCCccEEEECCchH-------HHHHHHHHHhcCCCEEEEEEec
Confidence 235899999876442 1336788999999999887643
No 208
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.16 E-value=4.5e-11 Score=99.43 Aligned_cols=99 Identities=14% Similarity=0.114 Sum_probs=74.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC--------cCC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS--------SAL 191 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~--------~~l 191 (318)
.++.+|||||||+ |..+..+++.+.++.+|+|+|+|+ +++ . .+++|+++|+.+.+ ...
T Consensus 21 ~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~-----------~-~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (180)
T 1ej0_A 21 KPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDP-----------I-VGVDFLQGDFRDELVMKALLERVGD 86 (180)
T ss_dssp CTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCC-----------C-TTEEEEESCTTSHHHHHHHHHHHTT
T ss_pred CCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-ccc-----------c-CcEEEEEcccccchhhhhhhccCCC
Confidence 6778999999997 555567777644679999999999 532 1 67999999998865 444
Q ss_pred CCccEEEeccccCC-C-h--hHH------HHHHHHHHHhccCCeEEEEEcC
Q 021008 192 KDYEVVFLAALVGM-D-K--DEK------IRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 192 ~~fD~V~~aalvgm-~-~--~~k------~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+.||+|+....... . . ... .++++++.+.|+|||.+++...
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 68999997653321 1 1 111 6899999999999999988653
No 209
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.15 E-value=2.8e-11 Score=120.61 Aligned_cols=109 Identities=15% Similarity=0.168 Sum_probs=85.6
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc-CCCCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS-ALKDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~-~l~~fD~V 197 (318)
..++.+|||+||||++.|. .+|+....+++|+++|+|+.+++.+++++++ .|+. +.++++|+.+++. ..+.||+|
T Consensus 99 ~~~g~~VLDlgaGpG~kt~-~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r-~G~~--v~~~~~Da~~l~~~~~~~FD~I 174 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTT-HLAARMGGKGLLLANEVDGKRVRGLLENVER-WGAP--LAVTQAPPRALAEAFGTYFHRV 174 (464)
T ss_dssp CCTTCEEEESSCTTCHHHH-HHHHHTTTCSEEEEECSCHHHHHHHHHHHHH-HCCC--CEEECSCHHHHHHHHCSCEEEE
T ss_pred cCCCCEEEEEcCCcCHHHH-HHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCe--EEEEECCHHHhhhhccccCCEE
Confidence 3678999999999977775 5676543457999999999999999999998 7885 9999999998753 23589999
Q ss_pred Eecccc---CC---Ch---------------hHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALV---GM---DK---------------DEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalv---gm---~~---------------~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
++++-. |+ +. ....++++++.+.|||||+|++..
T Consensus 175 l~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 175 LLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 976532 11 00 112779999999999999999854
No 210
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.15 E-value=9.2e-11 Score=117.26 Aligned_cols=108 Identities=15% Similarity=0.194 Sum_probs=84.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc-CCCCccEEEe
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS-ALKDYEVVFL 199 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~-~l~~fD~V~~ 199 (318)
++.+|||+||||++.|. .+|+....+++|+++|+|+.+++.+++++++ .|+. +++++++|+.+++. ..+.||.|++
T Consensus 117 ~g~~VLDl~aGpG~kt~-~lA~~~~~~g~V~avDis~~~l~~~~~n~~r-~g~~-nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTT-QISARMNNEGAILANEFSASRVKVLHANISR-CGIS-NVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHH-HHHHHTTTCSEEEEECSSHHHHHHHHHHHHH-HTCC-SEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHH-HHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-cCCC-cEEEEeCCHHHhhhhccccCCEEEE
Confidence 78999999999977775 5776543468999999999999999999998 7774 79999999998754 3348999998
Q ss_pred cccc---CC---Ch---------------hHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV---GM---DK---------------DEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv---gm---~~---------------~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
++-. |+ +. ....++++++.+.|||||+|++..
T Consensus 194 D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 194 DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 6421 11 00 113578999999999999999854
No 211
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.15 E-value=2.2e-10 Score=109.90 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=79.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.+..+|||||||+ |..+..+++++ |+.+++++|+ |++++.|++ ..+++|+.+|..+ +... . |+|++
T Consensus 200 ~~~~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~--------~~~v~~~~~D~~~-~~p~-~-D~v~~ 265 (364)
T 3p9c_A 200 EGLGTLVDVGGGV-GATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ--------FPGVTHVGGDMFK-EVPS-G-DTILM 265 (364)
T ss_dssp TTCSEEEEETCTT-SHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC--------CTTEEEEECCTTT-CCCC-C-SEEEE
T ss_pred cCCCEEEEeCCCC-CHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh--------cCCeEEEeCCcCC-CCCC-C-CEEEe
Confidence 5678999999996 66667788775 9999999999 888876542 2689999999987 4442 3 99997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++.++..++|+++++.|||||+|++.+
T Consensus 266 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 266 KWILHDWSDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 7655 5666778899999999999999998876
No 212
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.15 E-value=1.4e-10 Score=112.40 Aligned_cols=107 Identities=9% Similarity=0.120 Sum_probs=83.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCC-CeEEEEccccccCcC----CCC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLST-RMFFHTTDIMNVSSA----LKD 193 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~-ri~f~~gDa~~l~~~----l~~ 193 (318)
.++++|||+|||++ .-++.+|++ |+ +|+|||+|+++++.|+++++. .|+.. +++|+++|+.+.... ...
T Consensus 211 ~~~~~VLDl~cGtG-~~sl~la~~---ga~~V~~vD~s~~al~~A~~N~~~-n~~~~~~v~~~~~D~~~~l~~~~~~~~~ 285 (385)
T 2b78_A 211 AAGKTVLNLFSYTA-AFSVAAAMG---GAMATTSVDLAKRSRALSLAHFEA-NHLDMANHQLVVMDVFDYFKYARRHHLT 285 (385)
T ss_dssp TBTCEEEEETCTTT-HHHHHHHHT---TBSEEEEEESCTTHHHHHHHHHHH-TTCCCTTEEEEESCHHHHHHHHHHTTCC
T ss_pred cCCCeEEEEeeccC-HHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHH-cCCCccceEEEECCHHHHHHHHHHhCCC
Confidence 57789999999975 455677763 55 899999999999999999998 78866 899999999874221 237
Q ss_pred ccEEEecccc-----CC--C-hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 194 YEVVFLAALV-----GM--D-KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 194 fD~V~~aalv-----gm--~-~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
||+|+++--- +. + .....+++..+.+.|+|||.|++..
T Consensus 286 fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 286 YDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp EEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999975211 01 1 2455678888999999999998866
No 213
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.14 E-value=2.2e-10 Score=111.33 Aligned_cols=105 Identities=15% Similarity=0.145 Sum_probs=81.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
.++++|||||||. |+-+++.|+ .|+ +|++||.|+ +++.|+++++. -|++++|+++.+|+.++..+ .+||+|+
T Consensus 82 ~~~k~VLDvG~Gt-GiLs~~Aa~---aGA~~V~ave~s~-~~~~a~~~~~~-n~~~~~i~~i~~~~~~~~lp-e~~Dviv 154 (376)
T 4hc4_A 82 LRGKTVLDVGAGT-GILSIFCAQ---AGARRVYAVEASA-IWQQAREVVRF-NGLEDRVHVLPGPVETVELP-EQVDAIV 154 (376)
T ss_dssp HTTCEEEEETCTT-SHHHHHHHH---TTCSEEEEEECST-THHHHHHHHHH-TTCTTTEEEEESCTTTCCCS-SCEEEEE
T ss_pred cCCCEEEEeCCCc-cHHHHHHHH---hCCCEEEEEeChH-HHHHHHHHHHH-cCCCceEEEEeeeeeeecCC-ccccEEE
Confidence 4789999999996 666676675 365 799999997 78999999998 89999999999999987433 4899998
Q ss_pred ecccc--CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALV--GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalv--gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+- ......-..++....+.|+|||+++-..
T Consensus 155 sE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~ 189 (376)
T 4hc4_A 155 SEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPAS 189 (376)
T ss_dssp CCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCE
T ss_pred eecccccccccchhhhHHHHHHhhCCCCceECCcc
Confidence 53211 1122355678888889999999986543
No 214
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.14 E-value=7.6e-11 Score=114.19 Aligned_cols=109 Identities=15% Similarity=0.029 Sum_probs=84.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC----CCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA----LKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~----l~~fD 195 (318)
.++++|||+|||++ .-++.+|+. ...+|+|+|+|+++++.|+++++. .|+.++++|+++|+.+.... ...||
T Consensus 216 ~~~~~VLDl~~G~G-~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~-n~~~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 216 QPGDRVLDVFTYTG-GFAIHAAIA--GADEVIGIDKSPRAIETAKENAKL-NGVEDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp CTTCEEEETTCTTT-HHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHH-TTCGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEecCCCC-HHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHH-cCCCccceEEECCHHHHHHHHHhhCCCCC
Confidence 47899999999965 455677763 234999999999999999999988 78766999999999876432 34899
Q ss_pred EEEecccc-CCC-------hhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 196 VVFLAALV-GMD-------KDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 196 ~V~~aalv-gm~-------~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+|+++.-- +.. .....+++.++.+.|+|||.+++-+-
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 99986411 101 14567899999999999999888763
No 215
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.14 E-value=6.6e-11 Score=120.17 Aligned_cols=103 Identities=13% Similarity=0.078 Sum_probs=77.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC--cCCCCccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS--SALKDYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~--~~l~~fD~V 197 (318)
..|-|||||||| +|+-+..||+ .|++|||||+++.+|+.|+..+.+ .|. .+++|.++++.++. ...++||+|
T Consensus 65 ~~~~~vLDvGCG-~G~~~~~la~---~ga~V~giD~~~~~i~~a~~~a~~-~~~-~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCA-QGFFSLSLAS---KGATIVGIDFQQENINVCRALAEE-NPD-FAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHT-STT-SEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCC-CcHHHHHHHh---CCCEEEEECCCHHHHHHHHHHHHh-cCC-CceEEEECCHHHHhhhccCCCccEE
Confidence 567899999999 6888899998 399999999999999999999887 443 36999999999873 344589999
Q ss_pred Eecccc-CCChhHHHHHHHHHHHhccCCeEEE
Q 021008 198 FLAALV-GMDKDEKIRVIDHLAKYMAPGALLM 228 (318)
Q Consensus 198 ~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv 228 (318)
+....+ +++..+...-+..+.+.+++++...
T Consensus 139 ~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 139 IGLSVFHHIVHLHGIDEVKRLLSRLADVTQAV 170 (569)
T ss_dssp EEESCHHHHHHHHCHHHHHHHHHHHHHHSSEE
T ss_pred EECcchhcCCCHHHHHHHHHHHHHhcccccee
Confidence 865544 3222222233445667777776443
No 216
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.13 E-value=5.6e-11 Score=118.24 Aligned_cols=110 Identities=12% Similarity=0.107 Sum_probs=85.8
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc-CCCCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS-ALKDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~-~l~~fD~V 197 (318)
+.++.+|||+||||++.|. .+|+....+++|+++|+|+.+++.+++++++ .|+. ++.++++|+.+++. ..+.||.|
T Consensus 103 ~~~g~~VLDlcaGpGgkt~-~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r-~g~~-nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKST-QLAAQMKGKGLLVTNEIFPKRAKILSENIER-WGVS-NAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp CCTTCEEEESSCTTCHHHH-HHHHHHTTCSEEEEECSSHHHHHHHHHHHHH-HTCS-SEEEECCCHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCcCHHHH-HHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH-cCCC-ceEEEeCCHHHhhhhccccCCEE
Confidence 3678999999999977775 5666543457999999999999999999998 7884 69999999988753 23489999
Q ss_pred Eecccc---CC---Chh---------------HHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALV---GM---DKD---------------EKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalv---gm---~~~---------------~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
++++-. |+ +.. ...++++++.+.|||||+|++..
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 987632 21 111 11278999999999999999854
No 217
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.13 E-value=3.3e-10 Score=104.23 Aligned_cols=102 Identities=12% Similarity=0.148 Sum_probs=78.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.+|.+|||||||.+|++..++ ++++++++|||+.+++.+++++.. .+.+.+|.++|....+.. ++||+|++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~-----~~~~y~a~DId~~~i~~ar~~~~~---~g~~~~~~v~D~~~~~~~-~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER-----GIASVWGCDIHQGLGDVITPFARE---KDWDFTFALQDVLCAPPA-EAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT-----TCSEEEEEESBHHHHHHHHHHHHH---TTCEEEEEECCTTTSCCC-CBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc-----cCCeEEEEeCCHHHHHHHHHHHHh---cCCCceEEEeecccCCCC-CCcchHHH
Confidence 578999999999877764332 699999999999999999999876 347789999999876543 38999975
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.-++ .+...+|...+ .+...|++++++|-..
T Consensus 175 lk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 175 FKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp ESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 5222 22445556566 7778999999887655
No 218
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.12 E-value=2.3e-10 Score=108.90 Aligned_cols=98 Identities=14% Similarity=0.150 Sum_probs=82.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++++|||+|||.++++ +. |+ .+.+|+++|+|+.+++.|+++++. .|+.++++|+++|+.+.. ..||+|++
T Consensus 194 ~~~~~VLDlg~G~G~~~-l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~-n~l~~~v~~~~~D~~~~~---~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFS-IA-CK---NAKKIYAIDINPHAIELLKKNIKL-NKLEHKIIPILSDVREVD---VKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHHH-HH-TT---TSSEEEEEESCHHHHHHHHHHHHH-TTCTTTEEEEESCGGGCC---CCEEEEEE
T ss_pred CCCCEEEEccCccCHHH-Hh-cc---CCCEEEEEECCHHHHHHHHHHHHH-cCCCCcEEEEECChHHhc---CCCcEEEE
Confidence 57899999999975555 55 65 478999999999999999999998 788789999999999875 68999998
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+-. ..-.++++.+.+.|+|||.+++.+
T Consensus 265 dpP-----~~~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 265 NLP-----KFAHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp CCT-----TTGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCc-----HhHHHHHHHHHHHcCCCCEEEEEE
Confidence 631 112378999999999999988865
No 219
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.12 E-value=2.7e-09 Score=92.69 Aligned_cols=100 Identities=10% Similarity=0.061 Sum_probs=77.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||+|||+ |..++.+++. ...+|+|+|+|+.+++.|++.+.. .|+ +++|+++|+.+++ ..||+|+.
T Consensus 48 ~~~~~vlD~g~G~-G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~-~~~--~~~~~~~d~~~~~---~~~D~v~~ 118 (207)
T 1wy7_A 48 IEGKVVADLGAGT-GVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGE-FKG--KFKVFIGDVSEFN---SRVDIVIM 118 (207)
T ss_dssp STTCEEEEETCTT-CHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGG-GTT--SEEEEESCGGGCC---CCCSEEEE
T ss_pred CCcCEEEEeeCCC-CHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHH-cCC--CEEEEECchHHcC---CCCCEEEE
Confidence 5788999999996 4555677763 234899999999999999999887 565 8999999999975 38999997
Q ss_pred ccccCC-ChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 200 AALVGM-DKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 200 aalvgm-~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
..-.+. ......++++.+.+.+ |+.+++.
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred cCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 642221 2234567899999888 7776665
No 220
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.11 E-value=3.4e-10 Score=111.78 Aligned_cols=109 Identities=15% Similarity=0.178 Sum_probs=85.1
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCC-cEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC--CCcc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTT-TCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL--KDYE 195 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~g-a~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l--~~fD 195 (318)
..++.+|||+||||++.|. .+|+.+ ++ ++|+++|+|+.+++.+++++++ .|+ .+++++++|+.+++..+ +.||
T Consensus 257 ~~~g~~VLDlgaG~G~~t~-~la~~~-~~~~~v~a~D~s~~~l~~~~~~~~~-~g~-~~v~~~~~D~~~~~~~~~~~~fD 332 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTT-HLAELM-KNKGKIYAFDVDKMRMKRLKDFVKR-MGI-KIVKPLVKDARKAPEIIGEEVAD 332 (450)
T ss_dssp CCTTCEEEESSCTTCHHHH-HHHHHT-TTCSEEEEECSCHHHHHHHHHHHHH-TTC-CSEEEECSCTTCCSSSSCSSCEE
T ss_pred CCCcCEEEEeCCCccHHHH-HHHHHc-CCCCEEEEEcCCHHHHHHHHHHHHH-cCC-CcEEEEEcChhhcchhhccCCCC
Confidence 3677899999999977765 567654 55 8999999999999999999998 777 47999999999876322 4799
Q ss_pred EEEecccc---CC---ChhH---------------HHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALV---GM---DKDE---------------KIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalv---gm---~~~~---------------k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|++++-. |+ .... ..++++++.+.|||||+|++-+
T Consensus 333 ~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 333 KVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp EEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99985422 11 1111 1678999999999999999765
No 221
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.11 E-value=3.6e-10 Score=97.71 Aligned_cols=97 Identities=14% Similarity=0.195 Sum_probs=71.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCC--CcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC---------
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLT--TTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS--------- 188 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~--ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~--------- 188 (318)
.++.+|||||||++.++ +.+++++ + +++|+|+|+++.+ . . .+++|+++|+.+.+
T Consensus 21 ~~~~~vLDlGcG~G~~~-~~l~~~~-~~~~~~v~gvD~s~~~---------~---~-~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWC-QVILERT-KNYKNKIIGIDKKIMD---------P---I-PNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCTTCHHH-HHHHHHT-TTSCEEEEEEESSCCC---------C---C-TTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCCCCHHH-HHHHHHc-CCCCceEEEEeCCccC---------C---C-CCceEEEccccchhhhhhccccc
Confidence 57789999999986655 5677664 5 7999999999931 1 1 56899999998865
Q ss_pred ----------------cCCCCccEEEeccccCC---ChhHH-------HHHHHHHHHhccCCeEEEEEc
Q 021008 189 ----------------SALKDYEVVFLAALVGM---DKDEK-------IRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 189 ----------------~~l~~fD~V~~aalvgm---~~~~k-------~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....+||+|+....... +..+. .++++++.+.|||||.+++..
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 23458999997643321 11122 248899999999999999855
No 222
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.11 E-value=1.6e-10 Score=111.84 Aligned_cols=110 Identities=9% Similarity=0.065 Sum_probs=81.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCC--CC----CCeEEEEccccccCcC---
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPD--LS----TRMFFHTTDIMNVSSA--- 190 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~g--l~----~ri~f~~gDa~~l~~~--- 190 (318)
+.|+|||+||+|. |.++..+++ + +..+|+.||||+++++.|++.+....+ +. .|++++.+|+.+....
T Consensus 187 p~pkrVL~IGgG~-G~~arellk-~-~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~ 263 (364)
T 2qfm_A 187 YTGKDVLILGGGD-GGILCEIVK-L-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 263 (364)
T ss_dssp CTTCEEEEEECTT-CHHHHHHHT-T-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEECCh-hHHHHHHHH-C-CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc
Confidence 4689999999995 666666665 3 348999999999999999999875111 32 3899999999985432
Q ss_pred -CCCccEEEecccc---CCCh--hHHHHHHHHH----HHhccCCeEEEEEcC
Q 021008 191 -LKDYEVVFLAALV---GMDK--DEKIRVIDHL----AKYMAPGALLMLRSA 232 (318)
Q Consensus 191 -l~~fD~V~~aalv---gm~~--~~k~~vl~~l----~r~LkpGg~lv~r~~ 232 (318)
.+.||+|+++..- +..+ .-..++++.+ .++|+|||++++...
T Consensus 264 ~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 264 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 3589999998743 1111 1235666766 899999999999874
No 223
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.11 E-value=2e-10 Score=108.20 Aligned_cols=112 Identities=12% Similarity=0.157 Sum_probs=86.2
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcC-CC--CCCCeEEEEccccccCcCCC-Cc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSD-PD--LSTRMFFHTTDIMNVSSALK-DY 194 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~-~g--l~~ri~f~~gDa~~l~~~l~-~f 194 (318)
.+.|+|||.||.|. |.++..+.+ |.+..+|+.|||||++++.|++.+... .| -..|++++.+|+........ .|
T Consensus 81 ~p~pk~VLIiGgGd-G~~~revlk-~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~y 158 (294)
T 3o4f_A 81 HGHAKHVLIIGGGD-GAMLREVTR-HKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTF 158 (294)
T ss_dssp SSCCCEEEEESCTT-SHHHHHHHT-CTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCE
T ss_pred CCCCCeEEEECCCc-hHHHHHHHH-cCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccC
Confidence 37899999999995 566656664 556789999999999999999987530 11 24799999999998654433 89
Q ss_pred cEEEeccccCCCh---hHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 195 EVVFLAALVGMDK---DEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 195 D~V~~aalvgm~~---~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|+|++++.-+... --..++++.+++.|+|||++++..+
T Consensus 159 DvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred CEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 9999987542211 1235799999999999999999763
No 224
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.11 E-value=2.6e-10 Score=108.28 Aligned_cols=98 Identities=11% Similarity=0.165 Sum_probs=78.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++++ |+.+++++|+ +.+++.|++ . .+++|+.+|..+ +. ..||+|++
T Consensus 187 ~~~~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-------~-~~v~~~~~d~~~-~~--p~~D~v~~ 252 (352)
T 1fp2_A 187 DGLESIVDVGGGT-GTTAKIICETF-PKLKCIVFDR-PQVVENLSG-------S-NNLTYVGGDMFT-SI--PNADAVLL 252 (352)
T ss_dssp TTCSEEEEETCTT-SHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-------B-TTEEEEECCTTT-CC--CCCSEEEE
T ss_pred ccCceEEEeCCCc-cHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc-------C-CCcEEEeccccC-CC--CCccEEEe
Confidence 5678999999996 66667788765 8999999999 999887754 1 349999999976 32 25999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccC---CeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAP---GALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~Lkp---Gg~lv~r~ 231 (318)
...+ .++.++..++++++++.||| ||+|++.+
T Consensus 253 ~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 253 KYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred ehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 6544 45555666999999999999 99998876
No 225
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.11 E-value=1.3e-10 Score=112.54 Aligned_cols=108 Identities=11% Similarity=0.016 Sum_probs=84.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCC-CCCeEEEEccccccCcC----CCCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDL-STRMFFHTTDIMNVSSA----LKDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl-~~ri~f~~gDa~~l~~~----l~~f 194 (318)
.++++|||+|||+++++ +.+|+. ...+|+|+|+|+++++.|+++++. .|+ .++++|+++|+.+.... ...|
T Consensus 219 ~~~~~VLDl~cG~G~~s-l~la~~--g~~~V~~vD~s~~al~~a~~n~~~-ngl~~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFA-VSALMG--GCSQVVSVDTSQEALDIARQNVEL-NKLDLSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEESCTTCSHH-HHHHHT--TCSEEEEEESCHHHHHHHHHHHHH-TTCCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEeeccCCHHH-HHHHHC--CCCEEEEEECCHHHHHHHHHHHHH-cCCCccceEEEECCHHHHHHHHHhcCCCC
Confidence 57899999999976555 677763 135999999999999999999988 777 66899999999876332 2489
Q ss_pred cEEEecccc-C-------CChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALV-G-------MDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalv-g-------m~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+|+++.-- + -......+++.++.+.|+|||.+++-.
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999987311 0 011466789999999999999998865
No 226
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.10 E-value=2.9e-10 Score=110.90 Aligned_cols=105 Identities=13% Similarity=0.027 Sum_probs=80.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC-CCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA-LKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~-l~~fD~V~ 198 (318)
.++++|||+|||++++| +.+|+ .|+.|+++|+|+.+++.|+++++. .|+.. +|.++|+.+.... .+.||+|+
T Consensus 213 ~~g~~VLDlg~GtG~~s-l~~a~---~ga~V~avDis~~al~~a~~n~~~-ng~~~--~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFA-LRAAR---KGAYALAVDKDLEALGVLDQAALR-LGLRV--DIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp CTTCEEEEESCTTTHHH-HHHHH---TTCEEEEEESCHHHHHHHHHHHHH-HTCCC--EEEESCHHHHHHTCCCCEEEEE
T ss_pred cCCCeEEEcccchhHHH-HHHHH---cCCeEEEEECCHHHHHHHHHHHHH-hCCCC--cEEEccHHHHHHHhcCCCCEEE
Confidence 45899999999975555 66776 377899999999999999999987 67754 5669999885432 23599999
Q ss_pred eccccCCC---------hhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 199 LAALVGMD---------KDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 199 ~aalvgm~---------~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
++.-. +. .....+++..+.+.|+|||.|++-+-
T Consensus 286 ~dpP~-f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 286 LDPPT-LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp ECCCC-CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ECCCc-CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 86421 01 13556899999999999999986653
No 227
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.10 E-value=4.4e-11 Score=115.80 Aligned_cols=101 Identities=14% Similarity=0.185 Sum_probs=77.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCe-EEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRM-FFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri-~f~~gDa~~l~~~l~~fD~V~ 198 (318)
.++.+|||||||. |..+..+++ .|.+|+|+|+|+.+++.|++. +..... .|..+++.++++..++||+|+
T Consensus 106 ~~~~~VLDiGcG~-G~~~~~l~~---~g~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~l~~~~~~fD~I~ 176 (416)
T 4e2x_A 106 GPDPFIVEIGCND-GIMLRTIQE---AGVRHLGFEPSSGVAAKAREK-----GIRVRTDFFEKATADDVRRTEGPANVIY 176 (416)
T ss_dssp SSSCEEEEETCTT-TTTHHHHHH---TTCEEEEECCCHHHHHHHHTT-----TCCEECSCCSHHHHHHHHHHHCCEEEEE
T ss_pred CCCCEEEEecCCC-CHHHHHHHH---cCCcEEEECCCHHHHHHHHHc-----CCCcceeeechhhHhhcccCCCCEEEEE
Confidence 5778999999996 556667776 378999999999999999875 222222 244566666665557899999
Q ss_pred ecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....+ ++ .+..++++++++.|||||++++..
T Consensus 177 ~~~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 177 AANTLCHI--PYVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EESCGGGC--TTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECChHHhc--CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 76544 33 478999999999999999999875
No 228
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.09 E-value=1.5e-10 Score=111.85 Aligned_cols=106 Identities=13% Similarity=0.012 Sum_probs=83.7
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC----CCCccE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA----LKDYEV 196 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~----l~~fD~ 196 (318)
++++|||+|||++ .-++.+|+. +.+|+|+|+|+.+++.|+++++. .|+.. ++|+++|+.+.... ...||+
T Consensus 209 ~~~~VLDlg~G~G-~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~-n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAG-GFALHLALG---FREVVAVDSSAEALRRAEENARL-NGLGN-VRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTT-HHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHH-TTCTT-EEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccC-HHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHH-cCCCC-ceEEECCHHHHHHHHHhcCCCeeE
Confidence 6789999999965 555677764 67999999999999999999988 77755 99999999876432 348999
Q ss_pred EEecccc-CCC-------hhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 197 VFLAALV-GMD-------KDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 197 V~~aalv-gm~-------~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|+++.-- +.. .....+++..+.+.|+|||.+++-..
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9986411 111 14567799999999999999988763
No 229
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.09 E-value=4e-10 Score=107.89 Aligned_cols=98 Identities=14% Similarity=0.190 Sum_probs=78.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++++ |+.+++++|+ +.+++.|++ . .+++|+.+|..+ +.. .||+|++
T Consensus 208 ~~~~~vLDvG~G~-G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~-------~-~~v~~~~~d~~~-~~~--~~D~v~~ 273 (372)
T 1fp1_D 208 EGISTLVDVGGGS-GRNLELIISKY-PLIKGINFDL-PQVIENAPP-------L-SGIEHVGGDMFA-SVP--QGDAMIL 273 (372)
T ss_dssp TTCSEEEEETCTT-SHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC-------C-TTEEEEECCTTT-CCC--CEEEEEE
T ss_pred CCCCEEEEeCCCC-cHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh-------c-CCCEEEeCCccc-CCC--CCCEEEE
Confidence 5678999999996 56667788765 8999999999 999887653 1 469999999987 332 4999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+ .++.++..++++++++.|||||+|++.+
T Consensus 274 ~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 274 KAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 6544 4555555699999999999999998875
No 230
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.08 E-value=7.7e-10 Score=115.32 Aligned_cols=108 Identities=10% Similarity=0.126 Sum_probs=85.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCC-CCeEEEEcccccc-CcCCCCccE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLS-TRMFFHTTDIMNV-SSALKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~-~ri~f~~gDa~~l-~~~l~~fD~ 196 (318)
.++++|||+|||+++++ +.+|+ .|+ +|++||+|+.++++|+++++. .|+. ++++|+++|+.+. +...+.||+
T Consensus 538 ~~g~~VLDlg~GtG~~s-l~aa~---~ga~~V~aVD~s~~al~~a~~N~~~-ngl~~~~v~~i~~D~~~~l~~~~~~fD~ 612 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSAT-VHAGL---GGARSTTTVDMSRTYLEWAERNLRL-NGLTGRAHRLIQADCLAWLREANEQFDL 612 (703)
T ss_dssp CTTCEEEEESCTTCHHH-HHHHH---TTCSEEEEEESCHHHHHHHHHHHHH-TTCCSTTEEEEESCHHHHHHHCCCCEEE
T ss_pred cCCCcEEEeeechhHHH-HHHHH---CCCCEEEEEeCCHHHHHHHHHHHHH-cCCCccceEEEecCHHHHHHhcCCCccE
Confidence 57899999999986655 66665 255 699999999999999999998 7886 6899999999984 333358999
Q ss_pred EEecccc-C--------C-ChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 197 VFLAALV-G--------M-DKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 197 V~~aalv-g--------m-~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|+++.-- + . ......+++..+.+.|+|||.|++...
T Consensus 613 Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 613 IFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp EEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 9986411 0 0 125677899999999999999987653
No 231
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.07 E-value=5.1e-10 Score=109.75 Aligned_cols=108 Identities=15% Similarity=0.146 Sum_probs=83.9
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC--cCCCCccE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS--SALKDYEV 196 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~--~~l~~fD~ 196 (318)
..++.+|||+||||++.|. .+|+. .++++|+++|+|+.+++.+++.++. .|+ +++++++|+.+++ ...+.||.
T Consensus 244 ~~~g~~VLDlgaG~G~~t~-~la~~-~~~~~v~a~D~~~~~l~~~~~~~~~-~g~--~~~~~~~D~~~~~~~~~~~~fD~ 318 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTT-HILEV-APEAQVVAVDIDEQRLSRVYDNLKR-LGM--KATVKQGDGRYPSQWCGEQQFDR 318 (429)
T ss_dssp CCTTCEEEEESCTTCHHHH-HHHHH-CTTCEEEEEESSTTTHHHHHHHHHH-TTC--CCEEEECCTTCTHHHHTTCCEEE
T ss_pred CCCcCeEEEECCCchHHHH-HHHHH-cCCCEEEEECCCHHHHHHHHHHHHH-cCC--CeEEEeCchhhchhhcccCCCCE
Confidence 3678899999999977765 56665 3668999999999999999999988 666 4899999998875 23357999
Q ss_pred EEecccc---CC---Chh---------------HHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALV---GM---DKD---------------EKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalv---gm---~~~---------------~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|++++-. |+ ... ...++++++.+.|||||++++..
T Consensus 319 Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp EEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9975422 11 111 11588999999999999999865
No 232
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.05 E-value=5.7e-10 Score=103.81 Aligned_cols=75 Identities=12% Similarity=0.174 Sum_probs=61.8
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||++.+| ..++++ +.+|+|||+|+.+++.+++.+.. .|...+++++++|+.+++. ..||+|+
T Consensus 26 ~~~~~~VLDiG~G~G~lt-~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~-~~~~~~v~~~~~D~~~~~~--~~fD~vv 98 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMT-VKLLEK---AKKVVACELDPRLVAELHKRVQG-TPVASKLQVLVGDVLKTDL--PFFDTCV 98 (285)
T ss_dssp CCTTCEEEEECCTTSTTH-HHHHHH---SSEEEEEESCHHHHHHHHHHHTT-STTGGGEEEEESCTTTSCC--CCCSEEE
T ss_pred CCCCCEEEEEcCcccHHH-HHHHhh---CCEEEEEECCHHHHHHHHHHHHh-cCCCCceEEEEcceecccc--hhhcEEE
Confidence 367789999999975555 567764 67999999999999999998876 6666789999999988643 4799988
Q ss_pred ec
Q 021008 199 LA 200 (318)
Q Consensus 199 ~a 200 (318)
..
T Consensus 99 ~n 100 (285)
T 1zq9_A 99 AN 100 (285)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 233
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.05 E-value=6.6e-10 Score=107.13 Aligned_cols=107 Identities=12% Similarity=0.018 Sum_probs=81.9
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||+|||. |.-++.+|+. .+.++|+|+|+|+.+++.|+++++. .|+.++++|+++|+.+++...+.||+|+
T Consensus 215 ~~~~~~vLD~gCGs-G~~~i~~a~~-~~~~~v~g~Dis~~~l~~A~~n~~~-~gl~~~i~~~~~D~~~~~~~~~~fD~Ii 291 (373)
T 3tm4_A 215 ELDGGSVLDPMCGS-GTILIELALR-RYSGEIIGIEKYRKHLIGAEMNALA-AGVLDKIKFIQGDATQLSQYVDSVDFAI 291 (373)
T ss_dssp TCCSCCEEETTCTT-CHHHHHHHHT-TCCSCEEEEESCHHHHHHHHHHHHH-TTCGGGCEEEECCGGGGGGTCSCEEEEE
T ss_pred cCCCCEEEEccCcC-cHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHHH-cCCCCceEEEECChhhCCcccCCcCEEE
Confidence 36789999999996 5555677764 2445999999999999999999998 8888899999999999987667899999
Q ss_pred eccccCC-------ChhHHHHHHHHHHHhccCCeEEEE
Q 021008 199 LAALVGM-------DKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 199 ~aalvgm-------~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
..--.+. -..-+.++++++.+++ +|+.+++
T Consensus 292 ~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i 328 (373)
T 3tm4_A 292 SNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI 328 (373)
T ss_dssp EECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE
T ss_pred ECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE
Confidence 7532111 0123477889999988 3333333
No 234
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.04 E-value=4.5e-10 Score=96.05 Aligned_cols=94 Identities=14% Similarity=0.047 Sum_probs=71.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..++.+|++ + +|+|+|+|+.+++. . .+++|+++|+.+ +...+.||+|+.
T Consensus 22 ~~~~~vLD~GcG~-G~~~~~l~~~---~-~v~gvD~s~~~~~~------~-----~~~~~~~~d~~~-~~~~~~fD~i~~ 84 (170)
T 3q87_B 22 LEMKIVLDLGTST-GVITEQLRKR---N-TVVSTDLNIRALES------H-----RGGNLVRADLLC-SINQESVDVVVF 84 (170)
T ss_dssp CCSCEEEEETCTT-CHHHHHHTTT---S-EEEEEESCHHHHHT------C-----SSSCEEECSTTT-TBCGGGCSEEEE
T ss_pred CCCCeEEEeccCc-cHHHHHHHhc---C-cEEEEECCHHHHhc------c-----cCCeEEECChhh-hcccCCCCEEEE
Confidence 5678999999996 6666778763 4 99999999999987 2 568999999987 344468999997
Q ss_pred ccccC-CCh-------hHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVG-MDK-------DEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvg-m~~-------~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..... .+. .+..+++.++.+.+ |||.+++-.
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 54221 111 13467888899999 999998754
No 235
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.02 E-value=7e-10 Score=97.26 Aligned_cols=121 Identities=19% Similarity=0.222 Sum_probs=80.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC---------
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA--------- 190 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~--------- 190 (318)
.++.+|||+||||+++| ..+|++ +++|+|||+++.. . ..+++|+++|+.+.+..
T Consensus 24 ~~g~~VLDlG~G~G~~s-~~la~~---~~~V~gvD~~~~~---------~----~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWT-QVLNSL---ARKIISIDLQEME---------E----IAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp CTTCEEEEESCTTCHHH-HHHTTT---CSEEEEEESSCCC---------C----CTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCEEEEEeecCCHHH-HHHHHc---CCcEEEEeccccc---------c----CCCeEEEEccccCHHHHHHHHHHhhc
Confidence 67899999999997777 467763 8999999999841 1 25799999999875310
Q ss_pred --CCCccEEEecccc---CCCh-------hHHHHHHHHHHHhccCCeEEEEEcCCCcccccccCCCccccC-CcEEEEEE
Q 021008 191 --LKDYEVVFLAALV---GMDK-------DEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPSDLL-GFEVLSVF 257 (318)
Q Consensus 191 --l~~fD~V~~aalv---gm~~-------~~k~~vl~~l~r~LkpGg~lv~r~~~g~r~~lYP~v~~~~l~-gf~~~~~~ 257 (318)
.+.||+|+.+... |... .....+++.+.++|||||.|++-...+... +.+- ..++ .|..+.+.
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~---~~~~-~~l~~~F~~v~~~ 162 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMT---NDFI-AIWRKNFSSYKIS 162 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHH---HHHH-HHHGGGEEEEEEE
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCH---HHHH-HHHHHhcCEEEEE
Confidence 0389999976422 2111 123578888999999999999866444321 1000 1122 57777777
Q ss_pred cCch
Q 021008 258 HPTD 261 (318)
Q Consensus 258 ~p~~ 261 (318)
.|..
T Consensus 163 kP~a 166 (191)
T 3dou_A 163 KPPA 166 (191)
T ss_dssp CC--
T ss_pred CCCC
Confidence 7743
No 236
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.02 E-value=2.6e-09 Score=92.61 Aligned_cols=97 Identities=16% Similarity=0.172 Sum_probs=71.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||+|||. |..++.+++. +..+|+|+|+|+.+++.|++.+. +++|+++|+.+++ +.||+|+.
T Consensus 50 ~~~~~vlD~gcG~-G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-------~~~~~~~d~~~~~---~~~D~v~~ 116 (200)
T 1ne2_A 50 IGGRSVIDAGTGN-GILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-------GVNFMVADVSEIS---GKYDTWIM 116 (200)
T ss_dssp SBTSEEEEETCTT-CHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-------TSEEEECCGGGCC---CCEEEEEE
T ss_pred CCCCEEEEEeCCc-cHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-------CCEEEECcHHHCC---CCeeEEEE
Confidence 5788999999996 5555677763 33479999999999999998754 6899999999975 58999997
Q ss_pred ccccC-CChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVG-MDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvg-m~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..-.+ +......++++++.+.+ |+++++.+
T Consensus 117 ~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~ 147 (200)
T 1ne2_A 117 NPPFGSVVKHSDRAFIDKAFETS--MWIYSIGN 147 (200)
T ss_dssp CCCC-------CHHHHHHHHHHE--EEEEEEEE
T ss_pred CCCchhccCchhHHHHHHHHHhc--CcEEEEEc
Confidence 65322 12233357899999988 66655554
No 237
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.01 E-value=4.3e-11 Score=108.53 Aligned_cols=97 Identities=10% Similarity=-0.009 Sum_probs=61.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCC-cEEEEEeCChHHHHHHHHHhhcCCCCC--CCeEEEE-ccccccCcCCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTT-TCFDNYDIDPSANSKALSLVSSDPDLS--TRMFFHT-TDIMNVSSALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~g-a~V~gvDid~~ai~~Ar~~~~~~~gl~--~ri~f~~-gDa~~l~~~l~~fD 195 (318)
..+++|||||||++. .+.+++++ | .+|+|||+|++++++|++...+ .... .++++.. +|.....++...||
T Consensus 36 ~~g~~VLDiGcGtG~-~t~~la~~---g~~~V~gvDis~~ml~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~D 110 (232)
T 3opn_A 36 INGKTCLDIGSSTGG-FTDVMLQN---GAKLVYALDVGTNQLAWKIRSDER-VVVMEQFNFRNAVLADFEQGRPSFTSID 110 (232)
T ss_dssp CTTCEEEEETCTTSH-HHHHHHHT---TCSEEEEECSSCCCCCHHHHTCTT-EEEECSCCGGGCCGGGCCSCCCSEEEEC
T ss_pred CCCCEEEEEccCCCH-HHHHHHhc---CCCEEEEEcCCHHHHHHHHHhCcc-ccccccceEEEeCHhHcCcCCCCEEEEE
Confidence 457899999999755 45677763 5 4999999999999998775433 1111 1233332 11111011222344
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
++|.. . .+++.+++++|||||.+++-
T Consensus 111 ~v~~~------l---~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 111 VSFIS------L---DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CSSSC------G---GGTHHHHHHHSCTTCEEEEE
T ss_pred EEhhh------H---HHHHHHHHHhccCCCEEEEE
Confidence 44322 1 56999999999999998874
No 238
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.00 E-value=9.2e-10 Score=102.42 Aligned_cols=105 Identities=10% Similarity=0.087 Sum_probs=81.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
..|.+|||||||.+|++..++ .. .|.++++++|||+.+++.+++++.. .|+. .+|.++|...-+ .-..||++++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~-~~-~p~a~y~a~DId~~~le~a~~~l~~-~g~~--~~~~v~D~~~~~-p~~~~DvaL~ 204 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWM-GL-PAETVYIASDIDARLVGFVDEALTR-LNVP--HRTNVADLLEDR-LDEPADVTLL 204 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTT-TC-CTTCEEEEEESBHHHHHHHHHHHHH-TTCC--EEEEECCTTTSC-CCSCCSEEEE
T ss_pred CCCceeeeeccCccHHHHHHH-hh-CCCCEEEEEeCCHHHHHHHHHHHHh-cCCC--ceEEEeeecccC-CCCCcchHHH
Confidence 568999999999888876544 33 4899999999999999999999988 5654 788888887643 2348999986
Q ss_pred cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.-++ .++...|...+ .+...|+|||++|-..
T Consensus 205 lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 205 LKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp TTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred HHHHHHhhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 5433 33455666677 8899999999998755
No 239
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.00 E-value=4.4e-10 Score=98.32 Aligned_cols=121 Identities=14% Similarity=0.154 Sum_probs=85.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||++ ..+..+ +.+|+|+|+|+. +++|+++|+.+++...+.||+|+.
T Consensus 66 ~~~~~vLDiG~G~G-~~~~~l------~~~v~~~D~s~~-----------------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 66 PASLVVADFGCGDC-RLASSI------RNPVHCFDLASL-----------------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp CTTSCEEEETCTTC-HHHHHC------CSCEEEEESSCS-----------------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred CCCCeEEEECCcCC-HHHHHh------hccEEEEeCCCC-----------------CceEEEeccccCCCCCCCEeEEEE
Confidence 56789999999975 433333 468999999996 467899999998766678999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcCCCcccccccCCCccc----c--CCcEEEEEEcCchhHHHHHHHHhhc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGARAFLYPVVDPSD----L--LGFEVLSVFHPTDEVINSVVLARKY 273 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~g~r~~lYP~v~~~~----l--~gf~~~~~~~p~~~VvNsvv~ark~ 273 (318)
...++. .+..++++++.+.|+|||.+++.+... . ++ ++++ + .||++.......+. ..++.++|.
T Consensus 122 ~~~l~~--~~~~~~l~~~~~~L~~gG~l~i~~~~~--~--~~--~~~~~~~~l~~~Gf~~~~~~~~~~~--~~~~~~~k~ 191 (215)
T 2zfu_A 122 CLSLMG--TNIRDFLEEANRVLKPGGLLKVAEVSS--R--FE--DVRTFLRAVTKLGFKIVSKDLTNSH--FFLFDFQKT 191 (215)
T ss_dssp ESCCCS--SCHHHHHHHHHHHEEEEEEEEEEECGG--G--CS--CHHHHHHHHHHTTEEEEEEECCSTT--CEEEEEEEC
T ss_pred ehhccc--cCHHHHHHHHHHhCCCCeEEEEEEcCC--C--CC--CHHHHHHHHHHCCCEEEEEecCCCe--EEEEEEEec
Confidence 654442 577899999999999999999876322 0 11 2221 2 28988765544332 235666665
Q ss_pred c
Q 021008 274 V 274 (318)
Q Consensus 274 ~ 274 (318)
.
T Consensus 192 ~ 192 (215)
T 2zfu_A 192 G 192 (215)
T ss_dssp S
T ss_pred C
Confidence 3
No 240
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.99 E-value=2.5e-09 Score=105.32 Aligned_cols=99 Identities=19% Similarity=0.152 Sum_probs=77.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||+|||. |.-++.+|+. +.+|+|+|+|+++++.|+++++. .|+. ++|+++|+.++... .||+|++
T Consensus 289 ~~~~~VLDlgcG~-G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~-ngl~--v~~~~~d~~~~~~~--~fD~Vv~ 359 (425)
T 2jjq_A 289 VEGEKILDMYSGV-GTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEI-NNVD--AEFEVASDREVSVK--GFDTVIV 359 (425)
T ss_dssp CCSSEEEEETCTT-THHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHH-HTCC--EEEEECCTTTCCCT--TCSEEEE
T ss_pred CCCCEEEEeeccc-hHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHH-cCCc--EEEEECChHHcCcc--CCCEEEE
Confidence 6788999999996 5555678873 78999999999999999999887 6664 99999999987543 7999998
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+--- ......+++.+. .++|||++++.-
T Consensus 360 dPPr---~g~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 360 DPPR---AGLHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCCT---TCSCHHHHHHHH-HHCCSEEEEEES
T ss_pred cCCc---cchHHHHHHHHH-hcCCCcEEEEEC
Confidence 6421 112235666665 599999988754
No 241
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.99 E-value=4.4e-10 Score=108.13 Aligned_cols=100 Identities=12% Similarity=0.059 Sum_probs=76.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC--------
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL-------- 191 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l-------- 191 (318)
..+.+|||+|||.+ .-++.+|+. ..+|+|+|+|+++++.|+++++. .|+ ++++|+++|+.++...+
T Consensus 212 ~~~~~vLDl~cG~G-~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~-ng~-~~v~~~~~d~~~~~~~~~~~~~~~~ 285 (369)
T 3bt7_A 212 GSKGDLLELYCGNG-NFSLALARN---FDRVLATEIAKPSVAAAQYNIAA-NHI-DNVQIIRMAAEEFTQAMNGVREFNR 285 (369)
T ss_dssp TCCSEEEEESCTTS-HHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHH-TTC-CSEEEECCCSHHHHHHHSSCCCCTT
T ss_pred cCCCEEEEccCCCC-HHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHH-cCC-CceEEEECCHHHHHHHHhhcccccc
Confidence 34689999999964 555678863 57999999999999999999987 777 58999999998753211
Q ss_pred --------CCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 192 --------KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 192 --------~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
..||+|+++- ++..+..++.+.++|||.+++-+-
T Consensus 286 l~~~~~~~~~fD~Vv~dP-------Pr~g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 286 LQGIDLKSYQCETIFVDP-------PRSGLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp GGGSCGGGCCEEEEEECC-------CTTCCCHHHHHHHTTSSEEEEEES
T ss_pred ccccccccCCCCEEEECc-------CccccHHHHHHHHhCCCEEEEEEC
Confidence 2699999764 122344455677789999888763
No 242
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.98 E-value=2.7e-10 Score=96.95 Aligned_cols=89 Identities=11% Similarity=0.179 Sum_probs=71.4
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc---CCCCcc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS---ALKDYE 195 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~---~l~~fD 195 (318)
..++.+||+||||. +++|+|+++++.|++.... +++|+++|+.+++. ..++||
T Consensus 10 ~~~g~~vL~~~~g~------------------v~vD~s~~ml~~a~~~~~~------~~~~~~~d~~~~~~~~~~~~~fD 65 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS------------------SPVEALKGLVDKLQALTGN------EGRVSVENIKQLLQSAHKESSFD 65 (176)
T ss_dssp CCTTSEEEEEECTT------------------SCHHHHHHHHHHHHHHTTT------TSEEEEEEGGGGGGGCCCSSCEE
T ss_pred CCCCCEEEEecCCc------------------eeeeCCHHHHHHHHHhccc------CcEEEEechhcCccccCCCCCEe
Confidence 47889999999984 1389999999999987642 48999999999876 566899
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+....++.-..+..++++++++.|||||.+++..
T Consensus 66 ~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 66 IILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp EEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 999754332111456889999999999999999954
No 243
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.98 E-value=3.3e-09 Score=100.24 Aligned_cols=109 Identities=17% Similarity=0.180 Sum_probs=81.4
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC---CCcc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL---KDYE 195 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l---~~fD 195 (318)
+.++.+|||+||||++.|. .+|+...++.+|+++|+|+.+++.+++++++ .|+ .+++++++|+.+++... ..||
T Consensus 100 ~~~g~~VLDlcaG~G~kt~-~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r-~g~-~~v~~~~~D~~~~~~~~~~~~~fD 176 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTS-HLAALLKNQGKIFAFDLDAKRLASMATLLAR-AGV-SCCELAEEDFLAVSPSDPRYHEVH 176 (309)
T ss_dssp CCTTCEEEESSCTTCHHHH-HHHHHHTTCSEEEEEESCHHHHHHHHHHHHH-TTC-CSEEEEECCGGGSCTTCGGGTTEE
T ss_pred CCCCCEEEEeCCChhHHHH-HHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-cCC-CeEEEEeCChHhcCccccccCCCC
Confidence 3678999999999987775 5665433568999999999999999999998 787 57999999999875432 4799
Q ss_pred EEEecccc---CC-Ch--hH-----------------HHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALV---GM-DK--DE-----------------KIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalv---gm-~~--~~-----------------k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.|++++-. |+ .. .. ..+++++..+.++ ||+|++..
T Consensus 177 ~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 177 YILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp EEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred EEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 99986432 22 11 00 1246777777776 99888754
No 244
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.96 E-value=2e-10 Score=106.90 Aligned_cols=105 Identities=7% Similarity=0.045 Sum_probs=71.6
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEE--EccccccCcCCCCccE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFH--TTDIMNVSSALKDYEV 196 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~--~gDa~~l~~~l~~fD~ 196 (318)
..++.+||||||||+++| .++|++ .+|+|||+++ +...+++........+.++.|+ ++|+.+++ .+.||+
T Consensus 80 ~~~g~~VLDlGcGtG~~s-~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~ 151 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWS-YYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADT 151 (276)
T ss_dssp CCCCEEEEEESCTTCHHH-HHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSE
T ss_pred CCCCCEEEEeccCCCHHH-HHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCE
Confidence 367889999999997776 567763 6899999999 4333322111001223379999 99999986 358999
Q ss_pred EEeccc--cCCChhHH---HHHHHHHHHhccCCe--EEEEEc
Q 021008 197 VFLAAL--VGMDKDEK---IRVIDHLAKYMAPGA--LLMLRS 231 (318)
Q Consensus 197 V~~aal--vgm~~~~k---~~vl~~l~r~LkpGg--~lv~r~ 231 (318)
|+.+.. .+....+. .++++.+.+.||||| .+++..
T Consensus 152 Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 152 VLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 997642 11111111 248999999999999 988854
No 245
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.96 E-value=1.5e-09 Score=101.77 Aligned_cols=107 Identities=10% Similarity=0.036 Sum_probs=87.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCC----CCcEEEEEeCCh--------------------------HHHHHHHHHhhc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHL----TTTCFDNYDIDP--------------------------SANSKALSLVSS 169 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~----~ga~V~gvDid~--------------------------~ai~~Ar~~~~~ 169 (318)
..|.+||++|+. .|+|++++|+... ++.+|+++|..+ ..++.+++++++
T Consensus 105 ~~pg~IlEiGv~-~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~ 183 (282)
T 2wk1_A 105 NVPGDLVETGVW-RGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN 183 (282)
T ss_dssp TCCCEEEEECCT-TSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH
T ss_pred CCCCcEEEeecC-chHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH
Confidence 578999999998 7999999986421 478999999642 146788999998
Q ss_pred CCCC-CCCeEEEEccccccCcCC--CCccEEEeccccCCCh-hHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 170 DPDL-STRMFFHTTDIMNVSSAL--KDYEVVFLAALVGMDK-DEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 170 ~~gl-~~ri~f~~gDa~~l~~~l--~~fD~V~~aalvgm~~-~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
.|+ .++|+++.||+.+..... ..||+||+++ ++ +.....|+.+.++|+|||++++++.
T Consensus 184 -~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDa----D~y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 184 -YDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDG----DLYESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp -TTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECC----CSHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred -cCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcC----CccccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 898 499999999998743333 3799999998 44 4567899999999999999999985
No 246
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.95 E-value=2.2e-09 Score=92.19 Aligned_cols=99 Identities=13% Similarity=0.148 Sum_probs=70.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCC--------cEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEE-EccccccCc-
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTT--------TCFDNYDIDPSANSKALSLVSSDPDLSTRMFFH-TTDIMNVSS- 189 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~g--------a~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~-~gDa~~l~~- 189 (318)
.++.+|||||||+ |..++.+|+++... ++|+|+|+|+.+ +. .+++++ .+|+.+...
T Consensus 21 ~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------------~~-~~~~~~~~~d~~~~~~~ 86 (196)
T 2nyu_A 21 RPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------------PL-EGATFLCPADVTDPRTS 86 (196)
T ss_dssp CTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------------CC-TTCEEECSCCTTSHHHH
T ss_pred CCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhcc------------cC-CCCeEEEeccCCCHHHH
Confidence 6789999999998 55567788764222 899999999931 12 568899 999876421
Q ss_pred -------CCCCccEEEecccc---CCChhHH-------HHHHHHHHHhccCCeEEEEEcC
Q 021008 190 -------ALKDYEVVFLAALV---GMDKDEK-------IRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 190 -------~l~~fD~V~~aalv---gm~~~~k-------~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
...+||+|+.+... +....+. .++++++.+.|||||.+++...
T Consensus 87 ~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 87 QRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 12379999964311 1111222 4789999999999999998764
No 247
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.95 E-value=1.9e-09 Score=102.44 Aligned_cols=98 Identities=9% Similarity=0.163 Sum_probs=77.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||||||+ |..+..+++++ |+.+++++|+ +.+++.|++ . .+++|+.+|..+ +.. +||+|++
T Consensus 192 ~~~~~vlDvG~G~-G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~-------~-~~v~~~~~d~~~-~~~--~~D~v~~ 257 (358)
T 1zg3_A 192 EGLESLVDVGGGT-GGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG-------N-ENLNFVGGDMFK-SIP--SADAVLL 257 (358)
T ss_dssp HTCSEEEEETCTT-SHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC-------C-SSEEEEECCTTT-CCC--CCSEEEE
T ss_pred cCCCEEEEECCCc-CHHHHHHHHHC-CCCeEEEecc-HHHHhhccc-------C-CCcEEEeCccCC-CCC--CceEEEE
Confidence 4678999999996 66667788765 8999999999 788876543 2 459999999987 433 6999997
Q ss_pred cccc-CCChhHHHHHHHHHHHhccC---CeEEEEEc
Q 021008 200 AALV-GMDKDEKIRVIDHLAKYMAP---GALLMLRS 231 (318)
Q Consensus 200 aalv-gm~~~~k~~vl~~l~r~Lkp---Gg~lv~r~ 231 (318)
...+ .++.++..++++++++.|+| ||+|++.+
T Consensus 258 ~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 258 KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred cccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 6544 45555566999999999999 99988865
No 248
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.95 E-value=2.2e-09 Score=100.89 Aligned_cols=96 Identities=16% Similarity=0.172 Sum_probs=70.1
Q ss_pred cCCCCEEEEEccCC----ChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEE-EEccccccCcCCCC
Q 021008 119 SRFPTKIAFIGSGP----LPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFF-HTTDIMNVSSALKD 193 (318)
Q Consensus 119 ~~~~~rVL~IGsGp----lp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f-~~gDa~~l~~~l~~ 193 (318)
..++.+|||+|||. +|.+ ..+++...++++|+|+|+++. + .+++| +++|+.+++.. +.
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~--------v-------~~v~~~i~gD~~~~~~~-~~ 123 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF--------V-------SDADSTLIGDCATVHTA-NK 123 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC--------B-------CSSSEEEESCGGGCCCS-SC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC--------C-------CCCEEEEECccccCCcc-Cc
Confidence 36788999999953 3344 556665434799999999997 1 35889 99999987643 57
Q ss_pred ccEEEeccccCC------C----hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 194 YEVVFLAALVGM------D----KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 194 fD~V~~aalvgm------~----~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
||+|+....... + .....++++++.++|||||.|++..
T Consensus 124 fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 124 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp EEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 999997532110 0 1234589999999999999999854
No 249
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.95 E-value=5.9e-09 Score=102.44 Aligned_cols=100 Identities=12% Similarity=0.120 Sum_probs=76.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC----cCCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS----SALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~----~~l~~fD 195 (318)
.++.+|||+|||. |.-++.+|+. +.+|+|+|+|+++++.|+++++. .|+. +++|+++|+.+.. ...+.||
T Consensus 285 ~~~~~VLDlgcG~-G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~-~~~~-~v~f~~~d~~~~l~~~~~~~~~fD 358 (433)
T 1uwv_A 285 QPEDRVLDLFCGM-GNFTLPLATQ---AASVVGVEGVPALVEKGQQNARL-NGLQ-NVTFYHENLEEDVTKQPWAKNGFD 358 (433)
T ss_dssp CTTCEEEEESCTT-TTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHH-TTCC-SEEEEECCTTSCCSSSGGGTTCCS
T ss_pred CCCCEEEECCCCC-CHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHH-cCCC-ceEEEECCHHHHhhhhhhhcCCCC
Confidence 5678999999995 6666788863 78999999999999999999987 6774 8999999998732 2334799
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
+|+++-- ...-.++++.+. .++|++++.+.
T Consensus 359 ~Vv~dPP----r~g~~~~~~~l~-~~~p~~ivyvs 388 (433)
T 1uwv_A 359 KVLLDPA----RAGAAGVMQQII-KLEPIRIVYVS 388 (433)
T ss_dssp EEEECCC----TTCCHHHHHHHH-HHCCSEEEEEE
T ss_pred EEEECCC----CccHHHHHHHHH-hcCCCeEEEEE
Confidence 9998641 111125666665 47898877663
No 250
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.94 E-value=2e-10 Score=106.27 Aligned_cols=105 Identities=10% Similarity=0.088 Sum_probs=71.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEE--EccccccCcCCCCccE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFH--TTDIMNVSSALKDYEV 196 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~--~gDa~~l~~~l~~fD~ 196 (318)
..++.+||||||||+++| .++|++ .+|+|||+++ +...+++........+.++.|+ ++|+.+++ ...||+
T Consensus 72 ~~~g~~VLDlGcGtG~~s-~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~ 143 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWS-YYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDV 143 (265)
T ss_dssp CCCCEEEEEESCTTSHHH-HHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSE
T ss_pred CCCCCEEEEeCcCCCHHH-HHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcE
Confidence 367889999999998776 567752 6899999999 4322221100001122378999 99999986 358999
Q ss_pred EEeccc--cCCChhHH---HHHHHHHHHhccCCe--EEEEEc
Q 021008 197 VFLAAL--VGMDKDEK---IRVIDHLAKYMAPGA--LLMLRS 231 (318)
Q Consensus 197 V~~aal--vgm~~~~k---~~vl~~l~r~LkpGg--~lv~r~ 231 (318)
|+.+.. .+....+. .++++.+.++||||| .+++..
T Consensus 144 V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 144 IMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 997632 12111111 248999999999999 998865
No 251
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.92 E-value=1.4e-09 Score=106.26 Aligned_cols=104 Identities=17% Similarity=0.120 Sum_probs=83.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCC-cEEEEEeCChHHHHHHHHHhhcCCCCCCC-eEEEEccccccCc-CCC-Ccc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTT-TCFDNYDIDPSANSKALSLVSSDPDLSTR-MFFHTTDIMNVSS-ALK-DYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~g-a~V~gvDid~~ai~~Ar~~~~~~~gl~~r-i~f~~gDa~~l~~-~l~-~fD 195 (318)
.++.+|||++||+++++ +.+|++. .| .+|+++|+|+++++.++++++. .|+.++ ++++++|+.++.. ... .||
T Consensus 51 ~~g~~VLDlfaGtG~~s-l~aa~~~-~ga~~V~avDi~~~av~~~~~N~~~-Ngl~~~~v~v~~~Da~~~l~~~~~~~fD 127 (392)
T 3axs_A 51 GRPVKVADPLSASGIRA-IRFLLET-SCVEKAYANDISSKAIEIMKENFKL-NNIPEDRYEIHGMEANFFLRKEWGFGFD 127 (392)
T ss_dssp CSCEEEEESSCTTSHHH-HHHHHHC-SCEEEEEEECSCHHHHHHHHHHHHH-TTCCGGGEEEECSCHHHHHHSCCSSCEE
T ss_pred CCCCEEEECCCcccHHH-HHHHHhC-CCCCEEEEEECCHHHHHHHHHHHHH-hCCCCceEEEEeCCHHHHHHHhhCCCCc
Confidence 35789999999986666 5566642 46 6899999999999999999998 888777 9999999988654 333 799
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+++.. +. ...+++.+.+.|+|||.|++..
T Consensus 128 ~V~lDP~-g~----~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDPF-GT----PVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECCS-SC----CHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCC-cC----HHHHHHHHHHHhCCCCEEEEEe
Confidence 9999873 21 2458889999999999887744
No 252
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.92 E-value=1.9e-09 Score=104.60 Aligned_cols=102 Identities=14% Similarity=0.107 Sum_probs=81.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC---------------CCCCCeEEEEcccc
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP---------------DLSTRMFFHTTDIM 185 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~---------------gl~~ri~f~~gDa~ 185 (318)
++.+|||+|||+ |.-++.+|++. ++.+|+++|+|+++++.++++++. . |+.+ ++++++|+.
T Consensus 47 ~~~~VLDl~aGt-G~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~-n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSAT-GIRGIRFALET-PAEEVWLNDISEDAYELMKRNVML-NFDGELRESKGRAILKGEKT-IVINHDDAN 122 (378)
T ss_dssp CCSEEEESSCTT-SHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHH-HCCSCCEECSSEEEEESSSE-EEEEESCHH
T ss_pred CCCEEEECCCch-hHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHH-hcccccccccccccccCCCc-eEEEcCcHH
Confidence 688999999997 55556777753 567899999999999999999987 5 6644 999999998
Q ss_pred ccCcCC-CCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 186 NVSSAL-KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 186 ~l~~~l-~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
++.... ..||+|+++.. + ....+++...+.++|||.|++..
T Consensus 123 ~~~~~~~~~fD~I~lDP~-~----~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 123 RLMAERHRYFHFIDLDPF-G----SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHHSTTCEEEEEECCS-S----CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhccCCCCEEEeCCC-C----CHHHHHHHHHHhcCCCCEEEEEe
Confidence 864333 37999998763 1 22578899999999999887753
No 253
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.89 E-value=4.4e-09 Score=98.50 Aligned_cols=75 Identities=16% Similarity=0.078 Sum_probs=57.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||++.+| ..++++ +.+|+|||+|+.+++.|++.+.. .|+ .+++|+++|+.+++. ..||+|+
T Consensus 40 ~~~~~~VLDiG~G~G~lt-~~La~~---~~~v~~vDi~~~~~~~a~~~~~~-~~~-~~v~~~~~D~~~~~~--~~~D~Vv 111 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLT-VKLLPL---AKKVITIDIDSRMISEVKKRCLY-EGY-NNLEVYEGDAIKTVF--PKFDVCT 111 (299)
T ss_dssp CCTTCEEEEECCTTSTTH-HHHTTT---SSEEEEECSCHHHHHHHHHHHHH-TTC-CCEEC----CCSSCC--CCCSEEE
T ss_pred CCCcCEEEEEcCcCcHHH-HHHHhc---CCEEEEEECCHHHHHHHHHHHHH-cCC-CceEEEECchhhCCc--ccCCEEE
Confidence 367889999999975555 567753 78999999999999999998876 566 689999999998754 4899998
Q ss_pred ecc
Q 021008 199 LAA 201 (318)
Q Consensus 199 ~aa 201 (318)
...
T Consensus 112 ~n~ 114 (299)
T 2h1r_A 112 ANI 114 (299)
T ss_dssp EEC
T ss_pred EcC
Confidence 653
No 254
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.88 E-value=4e-09 Score=97.30 Aligned_cols=113 Identities=19% Similarity=0.173 Sum_probs=80.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhC------CCC-----cEEEEEeCCh---H-----------HHHHHHHHhhcCC---
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINH------LTT-----TCFDNYDIDP---S-----------ANSKALSLVSSDP--- 171 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~------~~g-----a~V~gvDid~---~-----------ai~~Ar~~~~~~~--- 171 (318)
.++.+||+||+| +|++++.+++.. .|+ .+|+++|.+| + ..+.|+++.+.-.
T Consensus 59 ~~~~~ILEiGfG-tG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 59 HPLFVVAESGFG-TGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSEEEEEESCCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCEEEEECCC-hHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 456799999999 799998877642 353 5899999987 3 3446777765300
Q ss_pred ------CC---CCCeEEEEccccccCcCC-----CCccEEEeccccCC-Chh-HHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 172 ------DL---STRMFFHTTDIMNVSSAL-----KDYEVVFLAALVGM-DKD-EKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 172 ------gl---~~ri~f~~gDa~~l~~~l-----~~fD~V~~aalvgm-~~~-~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
++ ..+++++.||+.+....+ ..||+||++++..- +.+ -..++++.+++.|+|||+|+.-++.
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa 215 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA 215 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 12 246889999998843232 26999999986521 111 1467999999999999999975543
No 255
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.86 E-value=3.5e-09 Score=99.82 Aligned_cols=104 Identities=9% Similarity=0.056 Sum_probs=71.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeC----ChHHHHHHHHHhhcCCCCCCCeEEEEc-cccccCcCCCCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDI----DPSANSKALSLVSSDPDLSTRMFFHTT-DIMNVSSALKDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDi----d~~ai~~Ar~~~~~~~gl~~ri~f~~g-Da~~l~~~l~~f 194 (318)
.++.+||||||||+++| ..+|++ .+|+|||+ ++..++.+ ..+. .+ ..+++|+++ |+.+++. ..|
T Consensus 81 ~~g~~VLDlGcG~G~~s-~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~-~~-~~~v~~~~~~D~~~l~~--~~f 149 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWS-YYCGGL----KNVREVKGLTKGGPGHEEPI--PMST-YG-WNLVRLQSGVDVFFIPP--ERC 149 (305)
T ss_dssp CCCEEEEEETCTTSHHH-HHHHTS----TTEEEEEEECCCSTTSCCCC--CCCS-TT-GGGEEEECSCCTTTSCC--CCC
T ss_pred CCCCEEEEEcCCCCHHH-HHHHhc----CCEEEEeccccCchhHHHHH--Hhhh-cC-CCCeEEEeccccccCCc--CCC
Confidence 66789999999998776 567763 58999999 55443211 1111 22 257999999 9988753 489
Q ss_pred cEEEecccc--CCChhHHH---HHHHHHHHhccCCeEEEEEcCCC
Q 021008 195 EVVFLAALV--GMDKDEKI---RVIDHLAKYMAPGALLMLRSAHG 234 (318)
Q Consensus 195 D~V~~aalv--gm~~~~k~---~vl~~l~r~LkpGg~lv~r~~~g 234 (318)
|+|+.+... +....+.. +++..+.+.|||||.+++....+
T Consensus 150 D~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 150 DTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 999976432 21112222 58899999999999999866444
No 256
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.86 E-value=1.4e-09 Score=102.29 Aligned_cols=97 Identities=12% Similarity=-0.008 Sum_probs=66.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEE-EEccccccCc---CCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFF-HTTDIMNVSS---ALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f-~~gDa~~l~~---~l~~fD 195 (318)
.++++|||||||++++| .+++++ ...+|+|||+++.+++++.+.- .++.. ...|+..++. ....||
T Consensus 84 ~~g~~vLDiGcGTG~~t-~~L~~~--ga~~V~aVDvs~~mL~~a~r~~-------~rv~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFT-DVMLQN--GAKLVYAVDVGTNQLVWKLRQD-------DRVRSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp CTTCEEEEETCTTSHHH-HHHHHT--TCSEEEEECSSSSCSCHHHHTC-------TTEEEECSCCGGGCCGGGCTTCCCS
T ss_pred ccccEEEecCCCccHHH-HHHHhC--CCCEEEEEECCHHHHHHHHHhC-------cccceecccCceecchhhCCCCCCC
Confidence 46789999999987777 466653 3459999999999999864421 23322 2234443322 112499
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
+|+++... ++ -..++.+++++|+|||.+++-
T Consensus 154 ~v~~d~sf-~s---l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 154 FASIDVSF-IS---LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EEEECCSS-SC---GGGTHHHHHHHSCTTCEEEEE
T ss_pred EEEEEeeH-hh---HHHHHHHHHHHcCcCCEEEEE
Confidence 88875422 12 267999999999999998874
No 257
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.78 E-value=6.1e-09 Score=102.31 Aligned_cols=75 Identities=13% Similarity=0.039 Sum_probs=62.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC--CCCCCeEEEEccccccCcC--CCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP--DLSTRMFFHTTDIMNVSSA--LKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~--gl~~ri~f~~gDa~~l~~~--l~~fD 195 (318)
.++++|||+||| .|..++.+|+ .+.+|++||+|+.+++.|+++++. . |+ ++++|+++|+.+.... .+.||
T Consensus 92 ~~g~~VLDLgcG-~G~~al~LA~---~g~~V~~VD~s~~~l~~Ar~N~~~-~~~gl-~~i~~i~~Da~~~L~~~~~~~fD 165 (410)
T 3ll7_A 92 REGTKVVDLTGG-LGIDFIALMS---KASQGIYIERNDETAVAARHNIPL-LLNEG-KDVNILTGDFKEYLPLIKTFHPD 165 (410)
T ss_dssp CTTCEEEESSCS-SSHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHH-HSCTT-CEEEEEESCGGGSHHHHHHHCCS
T ss_pred CCCCEEEEeCCC-chHHHHHHHh---cCCEEEEEECCHHHHHHHHHhHHH-hccCC-CcEEEEECcHHHhhhhccCCCce
Confidence 358999999999 5777788886 378999999999999999999987 6 77 7899999999984222 24899
Q ss_pred EEEec
Q 021008 196 VVFLA 200 (318)
Q Consensus 196 ~V~~a 200 (318)
+||++
T Consensus 166 vV~lD 170 (410)
T 3ll7_A 166 YIYVD 170 (410)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
No 258
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.76 E-value=2.2e-08 Score=97.34 Aligned_cols=109 Identities=8% Similarity=0.004 Sum_probs=80.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCC------CCCCeEEEEccccccCc----
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPD------LSTRMFFHTTDIMNVSS---- 189 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~g------l~~ri~f~~gDa~~l~~---- 189 (318)
.+|+|||.||.|. |.++..+.+ | +..+|+.|||||++++.|++.+....+ -..|++++.+|+.+...
T Consensus 204 ~~pkrVLIIGgGd-G~~~revlk-h-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~ 280 (381)
T 3c6k_A 204 YTGKDVLILGGGD-GGILCEIVK-L-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 280 (381)
T ss_dssp CTTCEEEEEECTT-CHHHHHHHT-T-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEECCCc-HHHHHHHHh-c-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh
Confidence 5689999999995 555555554 5 568999999999999999998753111 13579999999986432
Q ss_pred CCCCccEEEecccc--------CCC-hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 190 ALKDYEVVFLAALV--------GMD-KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 190 ~l~~fD~V~~aalv--------gm~-~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..+.||+|+++..- +.. ..-..++++.+++.|+|||+++...
T Consensus 281 ~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 281 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 33479999998542 111 1224678999999999999999864
No 259
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.74 E-value=7.3e-08 Score=90.62 Aligned_cols=74 Identities=23% Similarity=0.084 Sum_probs=60.1
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||++.+| ..|+++ +.+|++||+|+++++.+++.+.. ..+++++++|+.+++.....||.|+
T Consensus 48 ~~~~~~VLEIG~G~G~lT-~~La~~---~~~V~aVEid~~li~~a~~~~~~----~~~v~vi~gD~l~~~~~~~~fD~Iv 119 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILT-EELAKN---AKKVYVIEIDKSLEPYANKLKEL----YNNIEIIWGDALKVDLNKLDFNKVV 119 (295)
T ss_dssp CCTTCEEEEECCTTSHHH-HHHHHH---SSEEEEEESCGGGHHHHHHHHHH----CSSEEEEESCTTTSCGGGSCCSEEE
T ss_pred CCCcCEEEEECCCchHHH-HHHHhc---CCEEEEEECCHHHHHHHHHHhcc----CCCeEEEECchhhCCcccCCccEEE
Confidence 367889999999975555 567764 78999999999999999998764 2579999999998765545799888
Q ss_pred ec
Q 021008 199 LA 200 (318)
Q Consensus 199 ~a 200 (318)
..
T Consensus 120 ~N 121 (295)
T 3gru_A 120 AN 121 (295)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 260
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.74 E-value=1.5e-08 Score=95.47 Aligned_cols=78 Identities=8% Similarity=-0.020 Sum_probs=63.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc-----CCCC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS-----ALKD 193 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~-----~l~~ 193 (318)
..++.+|||+|||+++.| +.+++++ ++++|+|+|+|+++++.|++.++. .| .+++|+++|..+++. ....
T Consensus 24 ~~~g~~vLD~g~G~G~~s-~~la~~~-~~~~VigvD~d~~al~~A~~~~~~-~g--~~v~~v~~d~~~l~~~l~~~g~~~ 98 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHS-RAILEHC-PGCRIIGIDVDSEVLRIAEEKLKE-FS--DRVSLFKVSYREADFLLKTLGIEK 98 (301)
T ss_dssp CCTTCEEEETTCTTSHHH-HHHHHHC-TTCEEEEEESCHHHHHHHHHHTGG-GT--TTEEEEECCGGGHHHHHHHTTCSC
T ss_pred CCCCCEEEEEeCCcCHHH-HHHHHHC-CCCEEEEEECCHHHHHHHHHHHHh-cC--CcEEEEECCHHHHHHHHHhcCCCC
Confidence 357789999999976665 5677654 689999999999999999999887 55 799999999988752 1247
Q ss_pred ccEEEecc
Q 021008 194 YEVVFLAA 201 (318)
Q Consensus 194 fD~V~~aa 201 (318)
||.|+++.
T Consensus 99 ~D~Vl~D~ 106 (301)
T 1m6y_A 99 VDGILMDL 106 (301)
T ss_dssp EEEEEEEC
T ss_pred CCEEEEcC
Confidence 99999775
No 261
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.73 E-value=8.6e-08 Score=93.41 Aligned_cols=110 Identities=12% Similarity=0.037 Sum_probs=80.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHh---CCCC----------------------------------cEEEEEeCChHHHHH
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAIN---HLTT----------------------------------TCFDNYDIDPSANSK 162 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~---~~~g----------------------------------a~V~gvDid~~ai~~ 162 (318)
.++.+|+|.|||.+.+. +-.|.. ..|| .+|+|+|+|+.+++.
T Consensus 200 ~~~~~vlDp~CGSGt~~-ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 200 HPDRPFYDPVCGSGTIP-IEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CTTSCEEETTCTTSHHH-HHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCeEEEcCCCCCHHH-HHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 67789999999975443 444432 1122 579999999999999
Q ss_pred HHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEeccccCCCh---hHHHHHHHHHHHhccC--CeEEEEEcC
Q 021008 163 ALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGMDK---DEKIRVIDHLAKYMAP--GALLMLRSA 232 (318)
Q Consensus 163 Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aalvgm~~---~~k~~vl~~l~r~Lkp--Gg~lv~r~~ 232 (318)
|++++.. .|+.++++|+++|+.+++.. .+||+|++.---|... ++-.+++..+.+.+|+ |+.+.+-.+
T Consensus 279 Ar~Na~~-~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 279 AKQNAVE-AGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHH-TTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHH-cCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9999998 89988999999999998654 4899999763222111 3445567777777776 777655443
No 262
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.72 E-value=1.6e-07 Score=91.34 Aligned_cols=110 Identities=13% Similarity=0.068 Sum_probs=82.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHH---hCCCC----------------------------------cEEEEEeCChHHHHH
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAI---NHLTT----------------------------------TCFDNYDIDPSANSK 162 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~---~~~~g----------------------------------a~V~gvDid~~ai~~ 162 (318)
.++.+|+|.+||.+.+. +-.|. ...|| .+|+|+|+|+.+++.
T Consensus 193 ~~~~~llDp~CGSGt~l-IEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 193 FPDKPFVDPTCGSGTFC-IEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CTTSCEEETTCTTSHHH-HHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCeEEEeCCcCCHHH-HHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 67789999999975443 33332 21122 569999999999999
Q ss_pred HHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEeccccC--C-ChhHHHHHHHHHHHhccC--CeEEEEEcC
Q 021008 163 ALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVG--M-DKDEKIRVIDHLAKYMAP--GALLMLRSA 232 (318)
Q Consensus 163 Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aalvg--m-~~~~k~~vl~~l~r~Lkp--Gg~lv~r~~ 232 (318)
|+++++. .|+.++++|+++|+.+++.. .+||+|+..---| + +.++..+++.++.+.||+ |+.+.+-.+
T Consensus 272 Ar~Na~~-~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 272 ARKNARE-VGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHH-TTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHH-cCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 9999998 89999999999999998654 4899999763211 1 335667788888888877 777665553
No 263
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.70 E-value=3.3e-08 Score=93.73 Aligned_cols=109 Identities=19% Similarity=0.172 Sum_probs=80.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCC-----cEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTT-----TCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~g-----a~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~f 194 (318)
.++.+|||+|||+++++. .+++.. +. .+|+|+|+|+.+++.|+..+.. .|+ ++.++++|..+.. ....|
T Consensus 129 ~~~~~VlDp~cGsG~~l~-~~~~~~-~~~~~~~~~v~GiDi~~~~~~~a~~n~~~-~g~--~~~i~~~D~l~~~-~~~~f 202 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLT-TVINQL-ELKGDVDVHASGVDVDDLLISLALVGADL-QRQ--KMTLLHQDGLANL-LVDPV 202 (344)
T ss_dssp CSEEEEEETTCTTSHHHH-HHHHHH-HTTSSCEEEEEEEESCHHHHHHHHHHHHH-HTC--CCEEEESCTTSCC-CCCCE
T ss_pred CCCCEEEeCCCCccHHHH-HHHHHH-HHhcCCCceEEEEECCHHHHHHHHHHHHh-CCC--CceEEECCCCCcc-ccCCc
Confidence 466899999999866664 455442 32 8999999999999999998876 555 6899999988742 33589
Q ss_pred cEEEeccccCC-ChhH----------------HHHHHHHHHHhccCCeEEEEEcCCC
Q 021008 195 EVVFLAALVGM-DKDE----------------KIRVIDHLAKYMAPGALLMLRSAHG 234 (318)
Q Consensus 195 D~V~~aalvgm-~~~~----------------k~~vl~~l~r~LkpGg~lv~r~~~g 234 (318)
|+|+..--.+. +..+ ...+++++.+.|+|||++++-.+++
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 99986532111 1111 1368999999999999998877655
No 264
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.69 E-value=4.4e-09 Score=96.90 Aligned_cols=77 Identities=17% Similarity=0.165 Sum_probs=63.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCCh-------HHHHHHHHHhhcCCCCCCCeEEEEccccccCc--C
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDP-------SANSKALSLVSSDPDLSTRMFFHTTDIMNVSS--A 190 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~-------~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~--~ 190 (318)
.++.+|||+|||. |..++.+|+. |++|+++|+|+ ++++.|+++++. .|+.++++|+++|+.++.. .
T Consensus 82 ~~~~~VLDlgcG~-G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~-~~~~~ri~~~~~d~~~~l~~~~ 156 (258)
T 2r6z_A 82 TAHPTVWDATAGL-GRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPET-QDTAARINLHFGNAAEQMPALV 156 (258)
T ss_dssp GGCCCEEETTCTT-CHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHH-HHHHTTEEEEESCHHHHHHHHH
T ss_pred CCcCeEEEeeCcc-CHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHh-hCCccCeEEEECCHHHHHHhhh
Confidence 4568999999995 6777888873 78999999999 999999988776 5666789999999987522 1
Q ss_pred C--CCccEEEecc
Q 021008 191 L--KDYEVVFLAA 201 (318)
Q Consensus 191 l--~~fD~V~~aa 201 (318)
. ++||+|+++-
T Consensus 157 ~~~~~fD~V~~dP 169 (258)
T 2r6z_A 157 KTQGKPDIVYLDP 169 (258)
T ss_dssp HHHCCCSEEEECC
T ss_pred ccCCCccEEEECC
Confidence 1 4799999864
No 265
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.65 E-value=3.5e-07 Score=82.95 Aligned_cols=70 Identities=17% Similarity=0.175 Sum_probs=55.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCC-CccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALK-DYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~-~fD~V 197 (318)
.++.+|||||||++.+| ..++++ +.+|+|||+|+++++.+++.+.. . .+++++++|+.+++...+ .|++|
T Consensus 29 ~~~~~VLDiG~G~G~lt-~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~---~-~~v~~~~~D~~~~~~~~~~~~~vv 99 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFT-LELVQR---CNFVTAIEIDHKLCKTTENKLVD---H-DNFQVLNKDILQFKFPKNQSYKIF 99 (244)
T ss_dssp CTTCEEEEECCTTSHHH-HHHHHH---SSEEEEECSCHHHHHHHHHHTTT---C-CSEEEECCCGGGCCCCSSCCCEEE
T ss_pred CCCCEEEEEeCCchHHH-HHHHHc---CCeEEEEECCHHHHHHHHHhhcc---C-CCeEEEEChHHhCCcccCCCeEEE
Confidence 57789999999975555 567764 68999999999999999998764 2 689999999999865432 45433
No 266
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.64 E-value=1.5e-07 Score=91.35 Aligned_cols=109 Identities=16% Similarity=0.114 Sum_probs=80.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHh---CCC----------------------------------CcEEEEEeCChHHHHH
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAIN---HLT----------------------------------TTCFDNYDIDPSANSK 162 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~---~~~----------------------------------ga~V~gvDid~~ai~~ 162 (318)
.++.+|||.|||.+.+. +-+|.. ..| ..+|+|+|+|+.+++.
T Consensus 194 ~~~~~vlDp~CGSGt~l-ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 194 KAGRVLVDPMCGSGTIL-IEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CTTSCEEETTCTTCHHH-HHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCeEEEcCCCCCHHH-HHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 57789999999975444 444432 111 2679999999999999
Q ss_pred HHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEeccccCC---ChhHHHHHHHHHHHhccC--CeEEEEEc
Q 021008 163 ALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAALVGM---DKDEKIRVIDHLAKYMAP--GALLMLRS 231 (318)
Q Consensus 163 Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aalvgm---~~~~k~~vl~~l~r~Lkp--Gg~lv~r~ 231 (318)
|++++.. .|+.++++|.++|+.+++.. .+||+|+..---+. +.++-.+++.++.+.|++ |+.+.+-.
T Consensus 273 Ar~Na~~-~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 273 ARENAEI-AGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHH-HTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHHHHH-cCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 9999998 88888999999999998653 48999997532221 124456678888888877 77665544
No 267
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.63 E-value=5e-08 Score=93.91 Aligned_cols=101 Identities=14% Similarity=0.106 Sum_probs=73.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++.+|||+|||+++++ +.+++++.++.+|+|+|+|+.+++.| .+++++++|..+... .+.||+|+.
T Consensus 38 ~~~~~vLD~gcGtG~~~-~~~~~~~~~~~~i~gvDi~~~~~~~a-----------~~~~~~~~D~~~~~~-~~~fD~Ii~ 104 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFL-RAFREAHGTAYRFVGVEIDPKALDLP-----------PWAEGILADFLLWEP-GEAFDLILG 104 (421)
T ss_dssp CTTCEEEEETCTTCHHH-HHHHHHHCSCSEEEEEESCTTTCCCC-----------TTEEEEESCGGGCCC-SSCEEEEEE
T ss_pred CCCCEEEECCCCChHHH-HHHHHHhCCCCeEEEEECCHHHHHhC-----------CCCcEEeCChhhcCc-cCCCCEEEE
Confidence 45679999999975554 56776543578999999999987655 578999999988643 358999986
Q ss_pred cc-cc---C-------CChhHH-----------------HHHHHHHHHhccCCeEEEEEcCC
Q 021008 200 AA-LV---G-------MDKDEK-----------------IRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 200 aa-lv---g-------m~~~~k-----------------~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
.- .. . ++.+.+ ..+++.+.+.|+|||.+++-...
T Consensus 105 NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 105 NPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 31 00 0 222222 26799999999999998776543
No 268
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.61 E-value=4e-09 Score=95.32 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=70.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC-CCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL-KDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l-~~fD~V~ 198 (318)
.++.+|||||||++.+| ..++++ +.+|+|||+|+++++.|++.+. ...+++++++|+.+++... ++| .|+
T Consensus 28 ~~~~~VLDiG~G~G~~~-~~l~~~---~~~v~~id~~~~~~~~a~~~~~----~~~~v~~~~~D~~~~~~~~~~~f-~vv 98 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLT-TKLAKI---SKQVTSIELDSHLFNLSSEKLK----LNTRVTLIHQDILQFQFPNKQRY-KIV 98 (245)
T ss_dssp CSSEEEEECSCCCSSCS-HHHHHH---SSEEEESSSSCSSSSSSSCTTT----TCSEEEECCSCCTTTTCCCSSEE-EEE
T ss_pred CCCCEEEEEeCCCCHHH-HHHHHh---CCeEEEEECCHHHHHHHHHHhc----cCCceEEEECChhhcCcccCCCc-EEE
Confidence 57789999999976666 567764 6899999999999999887654 2368999999999986543 467 333
Q ss_pred eccccCCChhHHHH----------HH----HHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIR----------VI----DHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~----------vl----~~l~r~LkpGg~lv~r~ 231 (318)
..---......-.. ++ +.+.+.|+|||.+.+-.
T Consensus 99 ~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 99 GNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred EeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 22100001111112 23 55789999999876543
No 269
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.60 E-value=1.5e-08 Score=93.66 Aligned_cols=80 Identities=15% Similarity=0.161 Sum_probs=60.6
Q ss_pred CCC--CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc---C---CC-CCCCeEEEEccccccCcC
Q 021008 120 RFP--TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSS---D---PD-LSTRMFFHTTDIMNVSSA 190 (318)
Q Consensus 120 ~~~--~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~---~---~g-l~~ri~f~~gDa~~l~~~ 190 (318)
.++ .+|||+||| .|..++.+|++ |++|++||+++.+.+.+++.++. . .+ +..+++++++|+.++...
T Consensus 85 ~~g~~~~VLDl~~G-~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~ 160 (258)
T 2oyr_A 85 KGDYLPDVVDATAG-LGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD 160 (258)
T ss_dssp BTTBCCCEEETTCT-TCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT
T ss_pred cCCCCCEEEEcCCc-CCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh
Confidence 455 899999999 68888899985 78999999999876666665442 0 12 336899999999985433
Q ss_pred C-CCccEEEecccc
Q 021008 191 L-KDYEVVFLAALV 203 (318)
Q Consensus 191 l-~~fD~V~~aalv 203 (318)
. ..||+||++-.-
T Consensus 161 ~~~~fDvV~lDP~y 174 (258)
T 2oyr_A 161 ITPRPQVVYLDPMF 174 (258)
T ss_dssp CSSCCSEEEECCCC
T ss_pred CcccCCEEEEcCCC
Confidence 3 379999998644
No 270
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.56 E-value=2.8e-07 Score=85.60 Aligned_cols=70 Identities=11% Similarity=-0.042 Sum_probs=55.8
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC-CCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL-KDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l-~~fD~V 197 (318)
..++ +|||||||++.+| ..|+++ +.+|++||+|+++++.+++.+.. .+++++++|+.+++... ..||.|
T Consensus 45 ~~~~-~VLEIG~G~G~lt-~~L~~~---~~~V~avEid~~~~~~l~~~~~~-----~~v~vi~~D~l~~~~~~~~~~~~i 114 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALT-RALLEA---GAEVTAIEKDLRLRPVLEETLSG-----LPVRLVFQDALLYPWEEVPQGSLL 114 (271)
T ss_dssp CCCS-CEEEECCTTSHHH-HHHHHT---TCCEEEEESCGGGHHHHHHHTTT-----SSEEEEESCGGGSCGGGSCTTEEE
T ss_pred CCCC-eEEEEeCchHHHH-HHHHHc---CCEEEEEECCHHHHHHHHHhcCC-----CCEEEEECChhhCChhhccCccEE
Confidence 3566 9999999976665 567763 68999999999999999987753 68999999999876542 267776
Q ss_pred E
Q 021008 198 F 198 (318)
Q Consensus 198 ~ 198 (318)
+
T Consensus 115 v 115 (271)
T 3fut_A 115 V 115 (271)
T ss_dssp E
T ss_pred E
Confidence 6
No 271
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.50 E-value=2.1e-07 Score=85.52 Aligned_cols=70 Identities=16% Similarity=0.105 Sum_probs=55.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC----CCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL----KDY 194 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l----~~f 194 (318)
..++.+|||||||++.+| ..|+++ +.+|++||+|+++++.+++.+.. ..+++++++|+.+++... +.|
T Consensus 27 ~~~~~~VLEIG~G~G~lt-~~La~~---~~~V~avEid~~~~~~~~~~~~~----~~~v~~i~~D~~~~~~~~~~~~~~~ 98 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALT-DYLLTE---CDNLALVEIDRDLVAFLQKKYNQ----QKNITIYQNDALQFDFSSVKTDKPL 98 (255)
T ss_dssp CCTTCEEEEECCTTTTTH-HHHTTT---SSEEEEEECCHHHHHHHHHHHTT----CTTEEEEESCTTTCCGGGSCCSSCE
T ss_pred CCCcCEEEEEcccccHHH-HHHHHh---CCEEEEEECCHHHHHHHHHHHhh----CCCcEEEEcchHhCCHHHhccCCCe
Confidence 367889999999975555 567753 68999999999999999998764 368999999999875421 357
Q ss_pred cE
Q 021008 195 EV 196 (318)
Q Consensus 195 D~ 196 (318)
|+
T Consensus 99 ~v 100 (255)
T 3tqs_A 99 RV 100 (255)
T ss_dssp EE
T ss_pred EE
Confidence 73
No 272
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.45 E-value=2.7e-07 Score=90.73 Aligned_cols=112 Identities=10% Similarity=0.065 Sum_probs=80.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhC------------CCCcEEEEEeCChHHHHHHHHHhhcCCCCCC-CeEEEEccccc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINH------------LTTTCFDNYDIDPSANSKALSLVSSDPDLST-RMFFHTTDIMN 186 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~------------~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~-ri~f~~gDa~~ 186 (318)
.++.+|+|.|||.+++.. .+++.. .++.+|+|+|+|+.+++.|+..... .|+.. ++.++++|...
T Consensus 170 ~~~~~VlDpacGsG~fl~-~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l-~g~~~~~~~i~~gD~l~ 247 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLL-TAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL-HGIGTDRSPIVCEDSLE 247 (445)
T ss_dssp CTTCCEEETTCTTCHHHH-HHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH-TTCCSSCCSEEECCTTT
T ss_pred CCCCEEeccCCCcchHHH-HHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH-hCCCcCCCCEeeCCCCC
Confidence 566899999999877654 444421 0356899999999999999988776 56643 78899999987
Q ss_pred cCcCCCCccEEEecc-ccCCChh---------------HHHHHHHHHHHhccCCeEEEEEcCCC
Q 021008 187 VSSALKDYEVVFLAA-LVGMDKD---------------EKIRVIDHLAKYMAPGALLMLRSAHG 234 (318)
Q Consensus 187 l~~~l~~fD~V~~aa-lvgm~~~---------------~k~~vl~~l~r~LkpGg~lv~r~~~g 234 (318)
.+.. ..||+|+..- +.+.... .-..+++++.+.|+|||++++-.++|
T Consensus 248 ~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~ 310 (445)
T 2okc_A 248 KEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPDN 310 (445)
T ss_dssp SCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred Cccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECCc
Confidence 6532 3899998542 1111000 12478999999999999987766443
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.39 E-value=9.6e-07 Score=80.69 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=64.5
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++.+|||||||+ |.-+..++++ +..+|++||+|+.+++.+++. . ..+++++++|+.+++......+.++
T Consensus 29 ~~~~~~VLDiG~G~-G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~-~-----~~~v~~i~~D~~~~~~~~~~~~~~v 99 (249)
T 3ftd_A 29 IEEGNTVVEVGGGT-GNLTKVLLQH--PLKKLYVIELDREMVENLKSI-G-----DERLEVINEDASKFPFCSLGKELKV 99 (249)
T ss_dssp CCTTCEEEEEESCH-HHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS-C-----CTTEEEECSCTTTCCGGGSCSSEEE
T ss_pred CCCcCEEEEEcCch-HHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc-c-----CCCeEEEEcchhhCChhHccCCcEE
Confidence 35788999999996 5555667753 358999999999999999876 2 2689999999998764321113445
Q ss_pred eccccCCChhHHHHHHHHHHHhc--cCCeEEEE
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYM--APGALLML 229 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~L--kpGg~lv~ 229 (318)
++.+- . .--..++.++.+.. -+.+++++
T Consensus 100 v~NlP-y--~i~~~il~~ll~~~~~~~~~~~m~ 129 (249)
T 3ftd_A 100 VGNLP-Y--NVASLIIENTVYNKDCVPLAVFMV 129 (249)
T ss_dssp EEECC-T--TTHHHHHHHHHHTGGGCSEEEEEE
T ss_pred EEECc-h--hccHHHHHHHHhcCCCCceEEEEE
Confidence 45431 1 22334454444432 34455555
No 274
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.37 E-value=1.5e-06 Score=89.51 Aligned_cols=105 Identities=11% Similarity=0.144 Sum_probs=74.9
Q ss_pred CCCEEEEEccCCChHHHHHHH--HhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLA--INHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA--~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
....|++||||.+|++..++. ++.....+|.+||-+|-| ..|++++++ -|++++|+++.||+.++.-+ .+.|+|+
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A-~~a~~~v~~-N~~~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA-VVTLENWQF-EEWGSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH-HHHHHHHHH-HTTGGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH-HHHHHHHHh-ccCCCeEEEEeCcceeccCC-cccCEEE
Confidence 446899999999988544332 332223478999999854 578888887 78999999999999987322 3899998
Q ss_pred ecccc-CCChhHHHHHHHHHHHhccCCeEEE
Q 021008 199 LAALV-GMDKDEKIRVIDHLAKYMAPGALLM 228 (318)
Q Consensus 199 ~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv 228 (318)
..-+= .+.-|--..++...-|.|||||+++
T Consensus 434 SEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 44211 0011333468888899999999864
No 275
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.34 E-value=1.6e-06 Score=90.15 Aligned_cols=104 Identities=13% Similarity=0.202 Sum_probs=76.1
Q ss_pred CCEEEEEccCCChHHHH--HHHHhCC---------CCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC
Q 021008 122 PTKIAFIGSGPLPLTSI--VLAINHL---------TTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA 190 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai--~LA~~~~---------~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~ 190 (318)
.+.||+||||.++++.. ..++... ...+|++||.|+.++...++... -|++++|+++.+|+.++...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~--Ng~~d~VtVI~gd~eev~lp 487 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV--RTWKRRVTIIESDMRSLPGI 487 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH--HTTTTCSEEEESCGGGHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh--cCCCCeEEEEeCchhhcccc
Confidence 56899999999999843 3332110 13499999999988876666554 47889999999999987431
Q ss_pred -----CCCccEEEeccccCC--ChhHHHHHHHHHHHhccCCeEEE
Q 021008 191 -----LKDYEVVFLAALVGM--DKDEKIRVIDHLAKYMAPGALLM 228 (318)
Q Consensus 191 -----l~~fD~V~~aalvgm--~~~~k~~vl~~l~r~LkpGg~lv 228 (318)
....|+|+..-+ |- +-+--.+.|..+.+.|||||+++
T Consensus 488 ~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 488 AKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 358999985532 21 33445678888899999999864
No 276
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.27 E-value=4.3e-06 Score=87.10 Aligned_cols=83 Identities=19% Similarity=0.193 Sum_probs=60.6
Q ss_pred cEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC--CCccEEEeccccCC---ChhHHHHHHHH---HHH
Q 021008 148 TCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL--KDYEVVFLAALVGM---DKDEKIRVIDH---LAK 219 (318)
Q Consensus 148 a~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l--~~fD~V~~aalvgm---~~~~k~~vl~~---l~r 219 (318)
.+|+|+|+|+.+++.|++++.. .|+.+.++|.++|+.++.... ++||+|+..=--|. +.++-..++.. +.+
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~-agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARL-AGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHH-TTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHH-cCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHH
Confidence 6899999999999999999999 999999999999999874332 37999987521121 12233344444 445
Q ss_pred hccCCeEEEEEc
Q 021008 220 YMAPGALLMLRS 231 (318)
Q Consensus 220 ~LkpGg~lv~r~ 231 (318)
.+.|||.+.+-.
T Consensus 336 ~~~~g~~~~ilt 347 (703)
T 3v97_A 336 NQFGGWNLSLFS 347 (703)
T ss_dssp HHCTTCEEEEEE
T ss_pred hhCCCCeEEEEe
Confidence 556899887654
No 277
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.27 E-value=1.5e-06 Score=83.96 Aligned_cols=110 Identities=12% Similarity=0.073 Sum_probs=84.5
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCC-----CCCeEEEEccccccCcCC-C
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDL-----STRMFFHTTDIMNVSSAL-K 192 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl-----~~ri~f~~gDa~~l~~~l-~ 192 (318)
+.++.+|||.-+||+|-|+ .||+. ..+..|+++|+|+..++..++++++ .|. +.++.+...|+..++... +
T Consensus 146 ~~pg~~VLD~CAaPGGKT~-~la~~-~~~~~l~A~D~~~~R~~~l~~~l~r-~~~~~~~~~~~v~v~~~D~~~~~~~~~~ 222 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTL-ALLQT-GCCRNLAANDLSPSRIARLQKILHS-YVPEEIRDGNQVRVTSWDGRKWGELEGD 222 (359)
T ss_dssp CCTTEEEEESSCTTCHHHH-HHHHT-TCEEEEEEECSCHHHHHHHHHHHHH-HSCTTTTTSSSEEEECCCGGGHHHHSTT
T ss_pred CCCCCEEEEecCCccHHHH-HHHHh-cCCCcEEEEcCCHHHHHHHHHHHHH-hhhhhhccCCceEEEeCchhhcchhccc
Confidence 4788999999999999986 45553 4567899999999999999888876 443 368999999998764322 3
Q ss_pred CccEEEecccc-C----C---C--------h-------hHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALV-G----M---D--------K-------DEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalv-g----m---~--------~-------~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.||.|++++-+ | + + . .--.++|++..+.+||||+||+-.
T Consensus 223 ~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 223 TYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp CEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 79999988743 1 1 0 0 012468889999999999999865
No 278
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.24 E-value=1.5e-06 Score=80.90 Aligned_cols=64 Identities=14% Similarity=0.129 Sum_probs=50.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCC-CcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLT-TTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS 189 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~-ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~ 189 (318)
..++.+|||||||++.+|. .|+++... +++|++||+|+++++.+++.. . .+++++++|+.+++.
T Consensus 40 ~~~~~~VLEIG~G~G~lt~-~La~~~~~~~~~V~avDid~~~l~~a~~~~-~-----~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTG-PVIARLATPGSPLHAVELDRDLIGRLEQRF-G-----ELLELHAGDALTFDF 104 (279)
T ss_dssp CCTTCEEEEECCTTSTTHH-HHHHHHCBTTBCEEEEECCHHHHHHHHHHH-G-----GGEEEEESCGGGCCG
T ss_pred CCCcCEEEEEccccHHHHH-HHHHhCCCcCCeEEEEECCHHHHHHHHHhc-C-----CCcEEEECChhcCCh
Confidence 3678999999999766664 56654212 244999999999999999874 2 679999999998764
No 279
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.21 E-value=1.2e-06 Score=80.35 Aligned_cols=61 Identities=13% Similarity=0.078 Sum_probs=49.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcE--EEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTC--FDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS 189 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~--V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~ 189 (318)
..++.+|||||||++.+|. +++ +.+ |++||+|+++++.+++.... . .+++++++|+.+++.
T Consensus 19 ~~~~~~VLEIG~G~G~lt~--l~~----~~~~~v~avEid~~~~~~a~~~~~~---~-~~v~~i~~D~~~~~~ 81 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE--PVG----ERLDQLTVIELDRDLAARLQTHPFL---G-PKLTIYQQDAMTFNF 81 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH--HHH----TTCSCEEEECCCHHHHHHHHTCTTT---G-GGEEEECSCGGGCCH
T ss_pred CCCcCEEEEECCCCcHHHH--hhh----CCCCeEEEEECCHHHHHHHHHHhcc---C-CceEEEECchhhCCH
Confidence 3677899999999877776 654 345 99999999999999987654 2 589999999998753
No 280
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.12 E-value=2.8e-06 Score=72.44 Aligned_cols=87 Identities=17% Similarity=0.228 Sum_probs=65.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC-CCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL-KDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l-~~fD~V~ 198 (318)
.++.||++||||+++--|..||++ .|..|+++||+|.+++ |++.|+.+...+. ..||+||
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~--~g~~V~atDInp~Av~-----------------~v~dDiF~P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH--SKVDLVLTDIKPSHGG-----------------IVRDDITSPRMEIYRGAALIY 94 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH--SCCEEEEECSSCSSTT-----------------EECCCSSSCCHHHHTTEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHh--CCCeEEEEECCccccc-----------------eEEccCCCCcccccCCcCEEE
Confidence 467899999999866688899974 4999999999997765 8889998743322 4899998
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.-- +..+-...+.++++.. |+-++++-
T Consensus 95 sir----PP~El~~~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 95 SIR----PPAEIHSSLMRVADAV--GARLIIKP 121 (153)
T ss_dssp EES----CCTTTHHHHHHHHHHH--TCEEEEEC
T ss_pred EcC----CCHHHHHHHHHHHHHc--CCCEEEEc
Confidence 554 3456666777777654 66777765
No 281
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.06 E-value=1.1e-05 Score=81.57 Aligned_cols=113 Identities=11% Similarity=0.098 Sum_probs=79.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhC---C--------------CCcEEEEEeCChHHHHHHHHHhhcCCCCCC----CeE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINH---L--------------TTTCFDNYDIDPSANSKALSLVSSDPDLST----RMF 178 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~---~--------------~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~----ri~ 178 (318)
.++.+|+|.|||.+++... +++.. . ....|+|+|+|+.+++.|+..... .|... ++.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~-a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l-~gi~~~~~~~~~ 245 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIE-ADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL-HDIEGNLDHGGA 245 (541)
T ss_dssp CTTCCEEETTCTTTHHHHH-HHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT-TTCCCBGGGTBS
T ss_pred CCCCeEecCCcccchHHHH-HHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH-hCCCccccccCC
Confidence 5668999999998777643 33321 1 124799999999999999988765 56654 388
Q ss_pred EEEccccccC-cCCCCccEEEeccccCCC-------------hhHHHHHHHHHHHhccCCeEEEEEcCCC
Q 021008 179 FHTTDIMNVS-SALKDYEVVFLAALVGMD-------------KDEKIRVIDHLAKYMAPGALLMLRSAHG 234 (318)
Q Consensus 179 f~~gDa~~l~-~~l~~fD~V~~aalvgm~-------------~~~k~~vl~~l~r~LkpGg~lv~r~~~g 234 (318)
++++|....+ .....||+|+..--.+.. ......+++++.+.|+|||++++-.++|
T Consensus 246 I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 246 IRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp EEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred eEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 9999987643 234589999854211100 1123479999999999999987766443
No 282
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.93 E-value=1.8e-05 Score=73.96 Aligned_cols=85 Identities=13% Similarity=0.046 Sum_probs=63.8
Q ss_pred hhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccc
Q 021008 106 LSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIM 185 (318)
Q Consensus 106 L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~ 185 (318)
|.+.-.+.|. +.++..++|.+||.+|.|.. ++++ +++|+|+|+||+|++.|++ .+. +|++|+++|..
T Consensus 10 Ll~e~le~L~---~~~gg~~VD~T~G~GGHS~~-il~~---~g~VigiD~Dp~Ai~~A~~-L~~-----~rv~lv~~~f~ 76 (285)
T 1wg8_A 10 LYQEALDLLA---VRPGGVYVDATLGGAGHARG-ILER---GGRVIGLDQDPEAVARAKG-LHL-----PGLTVVQGNFR 76 (285)
T ss_dssp THHHHHHHHT---CCTTCEEEETTCTTSHHHHH-HHHT---TCEEEEEESCHHHHHHHHH-TCC-----TTEEEEESCGG
T ss_pred HHHHHHHhhC---CCCCCEEEEeCCCCcHHHHH-HHHC---CCEEEEEeCCHHHHHHHHh-hcc-----CCEEEEECCcc
Confidence 3344444442 46778999999998777754 5553 7899999999999999998 543 69999999998
Q ss_pred ccCc-----CCCCccEEEecccc
Q 021008 186 NVSS-----ALKDYEVVFLAALV 203 (318)
Q Consensus 186 ~l~~-----~l~~fD~V~~aalv 203 (318)
++.. ..++||.|+++-.|
T Consensus 77 ~l~~~L~~~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 77 HLKRHLAALGVERVDGILADLGV 99 (285)
T ss_dssp GHHHHHHHTTCSCEEEEEEECSC
T ss_pred hHHHHHHHcCCCCcCEEEeCCcc
Confidence 8742 22479999987544
No 283
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.82 E-value=9.5e-05 Score=71.64 Aligned_cols=88 Identities=15% Similarity=0.122 Sum_probs=62.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++++|+|+||+|+|.|-. ++++ |++|++||+.+= +..+.. ..+|+++.+|+.......+.||+|+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~-l~~r---g~~V~aVD~~~l----~~~l~~-----~~~V~~~~~d~~~~~~~~~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQ-LVKR---NMWVYSVDNGPM----AQSLMD-----TGQVTWLREDGFKFRPTRSNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHH-HHHT---TCEEEEECSSCC----CHHHHT-----TTCEEEECSCTTTCCCCSSCEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHH-HHHC---CCEEEEEEhhhc----Chhhcc-----CCCeEEEeCccccccCCCCCcCEEE
Confidence 37899999999999999965 5653 899999998651 122222 2689999999998765556899999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCC
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPG 224 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpG 224 (318)
.+-.. ...++++-+.+.+..|
T Consensus 276 sDm~~-----~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 276 CDMVE-----KPAKVAALMAQWLVNG 296 (375)
T ss_dssp ECCSS-----CHHHHHHHHHHHHHTT
T ss_pred EcCCC-----ChHHhHHHHHHHHhcc
Confidence 87532 3344555555555554
No 284
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=97.76 E-value=8.8e-05 Score=69.55 Aligned_cols=97 Identities=15% Similarity=0.147 Sum_probs=68.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc--cccc-cCcCCCCcc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT--DIMN-VSSALKDYE 195 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g--Da~~-l~~~l~~fD 195 (318)
..++++||.+|+|++|..++.+|+. .|++|+++|.+++..+.++++ |.. ..+-.. |..+ +....+.+|
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~l-----Ga~--~~i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARA--MGLRVAAVDIDDAKLNLARRL-----GAE--VAVNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHT-----TCS--EEEETTTSCHHHHHHHHHSSEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHHc-----CCC--EEEeCCCcCHHHHHHHhCCCCC
Confidence 4788999999999999999999986 499999999999998888663 321 112111 1111 111113689
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+..+.. ...++...+.|+|||+++.-.
T Consensus 235 ~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 235 GVLVTAVS-------PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEEESSCC-------HHHHHHHHHHEEEEEEEEECS
T ss_pred EEEEeCCC-------HHHHHHHHHHhccCCEEEEeC
Confidence 99866521 346777889999999998764
No 285
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=97.76 E-value=0.00027 Score=65.17 Aligned_cols=137 Identities=12% Similarity=0.116 Sum_probs=92.7
Q ss_pred CCcccccCCcChhhHHHhhHHH--HHHHhhcccCCCCEEEEEccCCChHHHHHHHHh------CCCCcEEEEEe-----C
Q 021008 89 NPIANLNIFPYYSNYIKLSQLE--FNILTQHCSRFPTKIAFIGSGPLPLTSIVLAIN------HLTTTCFDNYD-----I 155 (318)
Q Consensus 89 ~P~~~L~~fpY~~ny~~L~~~E--~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~------~~~ga~V~gvD-----i 155 (318)
.|...|..||.|.+-..+.+.- +++.. ....-|..|++.|+- -|.|++.+|+- +.++-+|.++| .
T Consensus 36 ~~~e~l~~~~~~~~~~~l~~~l~~~~l~~-~i~~vpG~ivE~GV~-rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P 113 (257)
T 3tos_A 36 PTEELVNNLPLFLRRHQMTDLLSMDALYR-QVLDVPGVIMEFGVR-FGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFP 113 (257)
T ss_dssp CGGGGGGCGGGGCCHHHHHHHHHHHHHHH-HTTTSCSEEEEECCT-TCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCC
T ss_pred ChHHHHHhHHhhhhHHHHHHHHHHHHHHH-HhhCCCCeEEEEecc-cCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCC
Confidence 3456678888877655555443 12222 223678899999997 57788887651 13568899999 3
Q ss_pred ChH----------------------HHHH---HHHHhhcCCCC-CCCeEEEEcccccc-Cc-----CCCCccEEEecccc
Q 021008 156 DPS----------------------ANSK---ALSLVSSDPDL-STRMFFHTTDIMNV-SS-----ALKDYEVVFLAALV 203 (318)
Q Consensus 156 d~~----------------------ai~~---Ar~~~~~~~gl-~~ri~f~~gDa~~l-~~-----~l~~fD~V~~aalv 203 (318)
.+. .+.. .++..+. .|. .++++++.|++.+. +. ....||+|++++
T Consensus 114 ~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~~-~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~-- 190 (257)
T 3tos_A 114 DVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECSDF-FGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL-- 190 (257)
T ss_dssp SCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTTST-TTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC--
T ss_pred CCccccccccccccCcccccchhHHHHHHHHHHHhhhhh-cCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC--
Confidence 321 1111 1222334 555 59999999999873 21 123699999998
Q ss_pred CCCh-hHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 204 GMDK-DEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 204 gm~~-~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+. +.....++.+..+|+|||++++.+.
T Consensus 191 --D~Y~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 191 --DLYEPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp --CCHHHHHHHHHHHGGGEEEEEEEEESST
T ss_pred --cccchHHHHHHHHHHHhCCCcEEEEcCC
Confidence 43 5667789999999999999999984
No 286
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.75 E-value=0.00014 Score=73.57 Aligned_cols=113 Identities=12% Similarity=0.132 Sum_probs=79.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhC--CCCcEEEEEeCChHHHHHHHHHhhcCCCCC-CCeEEEEcccccc--Cc-CCCC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINH--LTTTCFDNYDIDPSANSKALSLVSSDPDLS-TRMFFHTTDIMNV--SS-ALKD 193 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~--~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~-~ri~f~~gDa~~l--~~-~l~~ 193 (318)
.++.+|+|.+||.+++.. .+++.. .....++|+|+|+.+...|+.+..- .|+. .++.+.++|.... |. ....
T Consensus 220 ~~~~~VlDPaCGSG~fLi-~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l-~gi~~~~~~I~~gDtL~~d~p~~~~~~ 297 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLL-NAKRYSRQPQTVVYFGQELNTSTYNLARMNMIL-HGVPIENQFLHNADTLDEDWPTQEPTN 297 (542)
T ss_dssp CTTCEEEETTCTTSTTGG-GHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHH-TTCCGGGEEEEESCTTTSCSCCSSCCC
T ss_pred CCCCEEeecccchhHHHH-HHHHHHHhccCceEEEEECcHHHHHHHHHHHHH-cCCCcCccceEecceeccccccccccc
Confidence 367899999999877764 344332 1367999999999999999988766 5665 5789999999865 32 3348
Q ss_pred ccEEEeccc-------------------cC-CCh--hHHHHHHHHHHHhcc-CCeEEEEEcCCC
Q 021008 194 YEVVFLAAL-------------------VG-MDK--DEKIRVIDHLAKYMA-PGALLMLRSAHG 234 (318)
Q Consensus 194 fD~V~~aal-------------------vg-m~~--~~k~~vl~~l~r~Lk-pGg~lv~r~~~g 234 (318)
||+|+..=- .| .+. ..-..++.++.+.|+ |||++++-.++|
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 999983210 00 100 001348999999999 999987755444
No 287
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.74 E-value=2.8e-05 Score=78.77 Aligned_cols=111 Identities=10% Similarity=0.009 Sum_probs=76.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCC---------------CcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccc
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLT---------------TTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIM 185 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~---------------ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~ 185 (318)
.+.+|+|.+||.+++... +++. .. ...++|+|+|+.++..|+.+... .|+..++.+.++|..
T Consensus 244 ~~~~VlDPaCGSG~fLi~-a~~~-l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l-~gi~~~i~i~~gDtL 320 (544)
T 3khk_A 244 YKGRVYDPAMGSGGFFVS-SDKF-IEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI-RGIDFNFGKKNADSF 320 (544)
T ss_dssp CSEEEEESSCTTCHHHHH-HHHH-HHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH-TTCCCBCCSSSCCTT
T ss_pred CCCeEeCcccCcCcHHHH-HHHH-HHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH-hCCCcccceeccchh
Confidence 345999999998776543 2221 11 56899999999999999988776 677777766899987
Q ss_pred ccCc-CCCCccEEEeccccC--------------------------CChh--HHHHHHHHHHHhccCCeEEEEEcCCC
Q 021008 186 NVSS-ALKDYEVVFLAALVG--------------------------MDKD--EKIRVIDHLAKYMAPGALLMLRSAHG 234 (318)
Q Consensus 186 ~l~~-~l~~fD~V~~aalvg--------------------------m~~~--~k~~vl~~l~r~LkpGg~lv~r~~~g 234 (318)
..+. ....||+|+..=-.+ .+.. .-..+++++.+.|+|||++++--++|
T Consensus 321 ~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 321 LDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp TSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred cCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 6543 234899998421000 1100 11268999999999999987765544
No 288
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.71 E-value=3.8e-05 Score=72.36 Aligned_cols=92 Identities=16% Similarity=0.213 Sum_probs=68.2
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++++||.+|+|++|..++.+|+. .|++|+++|.+++..+.++++ |. ...+ .|..++.. .+|+||
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~l-----Ga--~~v~--~~~~~~~~---~~D~vi 239 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVA--MGAEVSVFARNEHKKQDALSM-----GV--KHFY--TDPKQCKE---ELDFII 239 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHH--TTCEEEEECSSSTTHHHHHHT-----TC--SEEE--SSGGGCCS---CEEEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHhc-----CC--Ceec--CCHHHHhc---CCCEEE
Confidence 4789999999999999999999986 499999999999988887653 32 2222 34333322 799998
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
-.. +-+ ..++...+.|+|||+++.-.
T Consensus 240 d~~--g~~-----~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 240 STI--PTH-----YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp ECC--CSC-----CCHHHHHTTEEEEEEEEECC
T ss_pred ECC--CcH-----HHHHHHHHHHhcCCEEEEEC
Confidence 543 211 24566678999999998865
No 289
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=97.69 E-value=0.00011 Score=69.42 Aligned_cols=97 Identities=15% Similarity=0.162 Sum_probs=70.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcE-EEEEeCChHHHHHHHHHhhcCCCCCCCeEEEE-----cccc----ccC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTC-FDNYDIDPSANSKALSLVSSDPDLSTRMFFHT-----TDIM----NVS 188 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~-V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~-----gDa~----~l~ 188 (318)
..++++||.+|+|++|..++.+|+. .|++ |+++|.+++..+.++++ .. .-+.+.. .|.. ++.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~l-~~-----~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKA--AGACPLVITDIDEGRLKFAKEI-CP-----EVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHH--TTCCSEEEEESCHHHHHHHHHH-CT-----TCEEEECCSCCHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHh-ch-----hcccccccccchHHHHHHHHHHh
Confidence 4788999999999999999999986 4887 99999999999999987 32 2233321 1111 111
Q ss_pred cCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 189 SALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 189 ~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.-..+|+||-.. | ....++...+.|+|||++++-.
T Consensus 249 -~g~g~Dvvid~~--g-----~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 249 -GGIEPAVALECT--G-----VESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp -SSCCCSEEEECS--C-----CHHHHHHHHHHSCTTCEEEECC
T ss_pred -CCCCCCEEEECC--C-----ChHHHHHHHHHhcCCCEEEEEc
Confidence 123799999554 2 1235677789999999998764
No 290
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=97.68 E-value=9.4e-05 Score=69.98 Aligned_cols=98 Identities=17% Similarity=0.158 Sum_probs=67.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEE---Ecccc-ccC--cCC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFH---TTDIM-NVS--SAL 191 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~---~gDa~-~l~--~~l 191 (318)
..++++||.+|+|++|+.++.+|+.+ |+ +|+++|.+++..+.++++ |...-+.+. ..|.. .+. ..
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l-----Ga~~vi~~~~~~~~~~~~~i~~~~~- 240 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKEI-----GADLVLQISKESPQEIARKVEGQLG- 240 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHT-----TCSEEEECSSCCHHHHHHHHHHHHT-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-----CCCEEEcCcccccchHHHHHHHHhC-
Confidence 47889999999999999999999864 88 999999999988887653 332111111 01111 111 12
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..||+||-..- ....++...+.|+|||+++.-.
T Consensus 241 ~g~D~vid~~g-------~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 241 CKPEVTIECTG-------AEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp SCCSEEEECSC-------CHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEEECCC-------ChHHHHHHHHHhcCCCEEEEEe
Confidence 47999995542 1235667789999999998754
No 291
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=97.62 E-value=2.9e-05 Score=73.10 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=68.1
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEE-ccc-cccCcCCCCccEEE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHT-TDI-MNVSSALKDYEVVF 198 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~-gDa-~~l~~~l~~fD~V~ 198 (318)
++++||.+|+|++|..++.+|+..+||++|+++|.+++..+.++++ |...-+.... .|. .++. .-..||+||
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l-----Ga~~vi~~~~~~~~~~~~~-~g~g~D~vi 243 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL-----GADYVSEMKDAESLINKLT-DGLGASIAI 243 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-----TCSEEECHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh-----CCCEEeccccchHHHHHhh-cCCCccEEE
Confidence 7899999999999999999998754599999999999998888764 2211011101 111 1221 112799999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
-.. | . ...++...+.|+|||+++.-.
T Consensus 244 d~~--g-~----~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 244 DLV--G-T----EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp ESS--C-C----HHHHHHHHHHEEEEEEEEECC
T ss_pred ECC--C-C----hHHHHHHHHHhhcCCEEEEeC
Confidence 654 2 1 235777789999999988754
No 292
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=97.56 E-value=5.4e-05 Score=72.28 Aligned_cols=99 Identities=13% Similarity=0.176 Sum_probs=69.0
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc-cCc----CCC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN-VSS----ALK 192 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~-l~~----~l~ 192 (318)
..++++||.+|+|++|..++.+|+. .|+ +|+++|.+++..+.++++=.. .-+.+...|..+ +.. ..+
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa~-----~vi~~~~~~~~~~i~~~~~~~~g 252 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARL--AGATTVILSTRQATKRRLAEEVGAT-----ATVDPSAGDVVEAIAGPVGLVPG 252 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCHHHHHHHHHHTCS-----EEECTTSSCHHHHHHSTTSSSTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHcCCC-----EEECCCCcCHHHHHHhhhhccCC
Confidence 4788999999999999999999986 488 999999999998888775221 111111122111 110 112
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.||+||-.. | ....++...+.|+|||++++-.
T Consensus 253 g~Dvvid~~--G-----~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 253 GVDVVIECA--G-----VAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp CEEEEEECS--C-----CHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCEEEECC--C-----CHHHHHHHHHHhccCCEEEEEe
Confidence 799999554 2 1346777889999999998865
No 293
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.54 E-value=0.00016 Score=67.37 Aligned_cols=120 Identities=12% Similarity=0.102 Sum_probs=69.5
Q ss_pred hHHHhhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCC--CCCCeEE
Q 021008 102 NYIKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPD--LSTRMFF 179 (318)
Q Consensus 102 ny~~L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~g--l~~ri~f 179 (318)
-..+|.++.-. ....++.+|||+||||+|.|-. .+++ .+-..|+|+|+.-+.... .. .+ .+.++.+
T Consensus 59 aA~KL~ei~ek----~~l~~~~~VLDLGaAPGGWSQv-Aa~~-~~~~~v~g~dVGvDl~~~-----pi-~~~~~g~~ii~ 126 (277)
T 3evf_A 59 GTAKLRWFHER----GYVKLEGRVIDLGCGRGGWCYY-AAAQ-KEVSGVKGFTLGRDGHEK-----PM-NVQSLGWNIIT 126 (277)
T ss_dssp HHHHHHHHHHT----TSSCCCEEEEEETCTTCHHHHH-HHTS-TTEEEEEEECCCCTTCCC-----CC-CCCBTTGGGEE
T ss_pred HHHHHHHHHHh----CCCCCCCEEEEecCCCCHHHHH-HHHh-cCCCcceeEEEeccCccc-----cc-ccCcCCCCeEE
Confidence 34456555433 2246778999999999999854 3432 134478899987532100 11 11 1224444
Q ss_pred EEccccccCcCCCCccEEEecccc--CCChhHH---HHHHHHHHHhccCC-eEEEEEcCC
Q 021008 180 HTTDIMNVSSALKDYEVVFLAALV--GMDKDEK---IRVIDHLAKYMAPG-ALLMLRSAH 233 (318)
Q Consensus 180 ~~gDa~~l~~~l~~fD~V~~aalv--gm~~~~k---~~vl~~l~r~LkpG-g~lv~r~~~ 233 (318)
..+++.........||+|+.+... |...-+- ..+++.+.+.|+|| |.+++.-..
T Consensus 127 ~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 127 FKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp EECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 555543222233489999976422 2211111 23567788999999 999997665
No 294
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=97.53 E-value=0.00012 Score=69.55 Aligned_cols=99 Identities=12% Similarity=0.068 Sum_probs=67.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc-cCc-CCCCcc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN-VSS-ALKDYE 195 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~-l~~-~l~~fD 195 (318)
..++++||.+|+|++|..++.+|+.. |+ +|+++|.+++..+.++++-.. .-+.....|..+ +.. ..+.||
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~-----~vi~~~~~~~~~~~~~~~~gg~D 260 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVC--GASIIIAVDIVESRLELAKQLGAT-----HVINSKTQDPVAAIKEITDGGVN 260 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHHHTCS-----EEEETTTSCHHHHHHHHTTSCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHHHHHHHHcCCC-----EEecCCccCHHHHHHHhcCCCCc
Confidence 47889999999999999999999864 88 799999999999988765221 111110111111 100 112699
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+||-.. | ....++...+.|+|||++++-.
T Consensus 261 ~vid~~--g-----~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 261 FALEST--G-----SPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEEECS--C-----CHHHHHHHHHTEEEEEEEEECC
T ss_pred EEEECC--C-----CHHHHHHHHHHHhcCCEEEEeC
Confidence 998554 2 1246777889999999998754
No 295
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=97.50 E-value=0.00032 Score=66.12 Aligned_cols=97 Identities=16% Similarity=0.100 Sum_probs=67.4
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc---ccc-ccCc--C--
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT---DIM-NVSS--A-- 190 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g---Da~-~l~~--~-- 190 (318)
..++++||.+|+|++|..++.+|+. .|++|+++|.+++..+.++++ |.. ..+-.. |.. .+.. .
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~l-----Ga~--~~~~~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKA--YGAFVVCTARSPRRLEVAKNC-----GAD--VTLVVDPAKEEESSIIERIRSA 236 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHT-----TCS--EEEECCTTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEcCCHHHHHHHHHh-----CCC--EEEcCcccccHHHHHHHHhccc
Confidence 4788999999999999999999986 489999999999988888653 332 112111 111 1110 0
Q ss_pred -CCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 191 -LKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 191 -l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
-..+|+||-..-. ...++...+.|+|||+++.-.
T Consensus 237 ~g~g~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 237 IGDLPNVTIDCSGN-------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SSSCCSEEEECSCC-------HHHHHHHHHHSCTTCEEEECS
T ss_pred cCCCCCEEEECCCC-------HHHHHHHHHHHhcCCEEEEEe
Confidence 1369999865421 235677789999999998754
No 296
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=97.49 E-value=0.00017 Score=67.94 Aligned_cols=98 Identities=18% Similarity=0.230 Sum_probs=68.1
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccc----ccCcCCCC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIM----NVSSALKD 193 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~----~l~~~l~~ 193 (318)
..++++||.+|+|++|+.++.+|+. .|+ +|+++|.+++..+.++++-.. .-+.....|.. ++. .-..
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~~Vi~~~~~~~~~~~~~~lGa~-----~vi~~~~~~~~~~v~~~t-~g~g 235 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANH--LGAGRIFAVGSRKHCCDIALEYGAT-----DIINYKNGDIVEQILKAT-DGKG 235 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHT--TTCSSEEEECCCHHHHHHHHHHTCC-----EEECGGGSCHHHHHHHHT-TTCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--cCCcEEEEECCCHHHHHHHHHhCCc-----eEEcCCCcCHHHHHHHHc-CCCC
Confidence 4788999999999999999999985 588 899999999988888775321 10111011111 111 1126
Q ss_pred ccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 194 YEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 194 fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
||+||-.. |. ...++...+.|+|||+++.-.
T Consensus 236 ~D~v~d~~--g~-----~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 236 VDKVVIAG--GD-----VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EEEEEECS--SC-----TTHHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECC--CC-----hHHHHHHHHHHhcCCEEEEec
Confidence 99998543 21 235677789999999998765
No 297
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.48 E-value=0.00052 Score=56.29 Aligned_cols=96 Identities=9% Similarity=-0.004 Sum_probs=67.2
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC----cCCCCccEE
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS----SALKDYEVV 197 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~----~~l~~fD~V 197 (318)
..+|+.+|+|.+|.......++ .|..|+++|.|++.++.+++ ..+.++.||+.+.. .....+|+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~--~g~~v~vid~~~~~~~~~~~---------~g~~~i~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA--SDIPLVVIETSRTRVDELRE---------RGVRAVLGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHH---------TTCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred CCCEEEECcCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHH---------cCCCEEECCCCCHHHHHhcCcccCCEE
Confidence 4689999999888776554443 48999999999998877653 23567889987631 123478988
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+++. +.......+...++.+.|+..++.|..
T Consensus 76 i~~~----~~~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 76 ILTI----PNGYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp EECC----SCHHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred EEEC----CChHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 8664 222333334556788899999888774
No 298
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.46 E-value=0.00012 Score=69.83 Aligned_cols=96 Identities=14% Similarity=0.176 Sum_probs=66.4
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc-ccccCcCCCCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD-IMNVSSALKDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD-a~~l~~~l~~fD~V 197 (318)
..++++||.+|+|++|..++.+|+. .|++|+++|.+++..+.++++ |...-+.....| +.++. ..||+|
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~Vi~~~~~~~~~~~a~~l-----Ga~~vi~~~~~~~~~~~~---~g~Dvv 261 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHA--MGAHVVAFTTSEAKREAAKAL-----GADEVVNSRNADEMAAHL---KSFDFI 261 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHH-----TCSEEEETTCHHHHHTTT---TCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHc-----CCcEEeccccHHHHHHhh---cCCCEE
Confidence 4788999999999999999999986 499999999999998888764 221111110111 11121 479999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|-..-. + ..++...+.|+|||+++.-.
T Consensus 262 id~~g~--~-----~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 262 LNTVAA--P-----HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp EECCSS--C-----CCHHHHHTTEEEEEEEEECC
T ss_pred EECCCC--H-----HHHHHHHHHhccCCEEEEec
Confidence 855421 1 13555678999999988754
No 299
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=97.43 E-value=7.1e-05 Score=71.81 Aligned_cols=105 Identities=10% Similarity=0.088 Sum_probs=68.8
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc-cc-ccC--cCCCC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD-IM-NVS--SALKD 193 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD-a~-~l~--~~l~~ 193 (318)
..++++||.+|+|++|+.++.+|+.. |+ +|+++|.+++..+.+++ +|. +-+.+...| .. .+. ..-..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~--Ga~~Vi~~~~~~~~~~~a~~-----lGa-~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLL--GAAVVIVGDLNPARLAHAKA-----QGF-EIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHH-----TTC-EEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHH-----cCC-cEEccCCcchHHHHHHHHhCCCC
Confidence 47889999999999999999999864 88 79999999999888865 343 111111111 01 111 11136
Q ss_pred ccEEEeccccC--------CChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 194 YEVVFLAALVG--------MDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 194 fD~V~~aalvg--------m~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+||-..-.. +..+.+...++...+.|++||++++-.
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 99998543210 001123346788889999999998754
No 300
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.41 E-value=0.00038 Score=65.33 Aligned_cols=94 Identities=13% Similarity=0.099 Sum_probs=67.0
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccc--ccCc---C-CC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIM--NVSS---A-LK 192 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~--~l~~---~-l~ 192 (318)
..++++||.+|+|++|..++.+|+. .|++|+++|.+++..+.++++ |.. .++ |.. ++.. . .+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~l-----Ga~---~~~--d~~~~~~~~~~~~~~~ 229 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKA--MGLNVVAVDIGDEKLELAKEL-----GAD---LVV--NPLKEDAAKFMKEKVG 229 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHT-----TCS---EEE--CTTTSCHHHHHHHHHS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHC-----CCC---EEe--cCCCccHHHHHHHHhC
Confidence 4788999999999999999999986 489999999999988887653 321 111 211 1100 0 04
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+|+-.+-. ...++...+.|++||+++.-.
T Consensus 230 ~~d~vid~~g~-------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 230 GVHAAVVTAVS-------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp SEEEEEESSCC-------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCCC-------HHHHHHHHHHhhcCCEEEEec
Confidence 79999865421 235677789999999998754
No 301
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=97.40 E-value=4.7e-05 Score=73.26 Aligned_cols=103 Identities=11% Similarity=0.127 Sum_probs=67.8
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccc-c-ccC--cCCCC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDI-M-NVS--SALKD 193 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa-~-~l~--~~l~~ 193 (318)
..++++||.+|+|++|+.++.+|+.+ |+ +|+++|.+++..+.+++ .|. +-+.+...|. . .+. ..-..
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~-----lGa-~~i~~~~~~~~~~~~~~~~~g~g 254 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLL--GAACVIVGDQNPERLKLLSD-----AGF-ETIDLRNSAPLRDQIDQILGKPE 254 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHT-----TTC-EEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHH-----cCC-cEEcCCCcchHHHHHHHHhCCCC
Confidence 47889999999999999999999864 88 99999999998887754 343 1111111111 1 110 11126
Q ss_pred ccEEEeccccCCCh---------hHHHHHHHHHHHhccCCeEEEEEc
Q 021008 194 YEVVFLAALVGMDK---------DEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 194 fD~V~~aalvgm~~---------~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
||+||-.. |... .+....++...+.|+|||++++-.
T Consensus 255 ~Dvvid~~--g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 255 VDCGVDAV--GFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp EEEEEECS--CTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCEEEECC--CCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 99998544 2110 011246778889999999987654
No 302
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.39 E-value=6.7e-05 Score=72.34 Aligned_cols=103 Identities=20% Similarity=0.210 Sum_probs=67.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++++|+.||+|++|..+..+++.+ |++|+++|.+++..+.+++.... .+.....+..++...+..+|+|+.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~g~------~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEFCG------RIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTT------SSEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhcCC------eeEeccCCHHHHHHHHcCCCEEEE
Confidence 4689999999999999998888864 89999999999888777654322 222221122222222236899998
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...++.. +.+.-+.++..+.|||||+++--.
T Consensus 238 ~~~~p~~-~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGA-KAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTS-CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCC-CCcceecHHHHhcCCCCcEEEEEe
Confidence 6654321 111112445568899999887654
No 303
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=97.37 E-value=0.00018 Score=68.20 Aligned_cols=96 Identities=14% Similarity=0.076 Sum_probs=67.8
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC------cCCC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS------SALK 192 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~------~~l~ 192 (318)
..++++||.+|+|++|+.++.+|+. .|++|+++|.+++..+.++++ |. ...+ ..+..++. ..-.
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~l-----Ga--~~vi-~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKA--TGAEVIVTSSSREKLDRAFAL-----GA--DHGI-NRLEEDWVERVYALTGDR 256 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHH-----TC--SEEE-ETTTSCHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEecCchhHHHHHHc-----CC--CEEE-cCCcccHHHHHHHHhCCC
Confidence 4788999999999999999999986 499999999999988888764 22 1111 12111110 1122
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
.+|+||-.+- + ..+....+.|+|||++++-..
T Consensus 257 g~D~vid~~g-~-------~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 257 GADHILEIAG-G-------AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp CEEEEEEETT-S-------SCHHHHHHHEEEEEEEEEECC
T ss_pred CceEEEECCC-h-------HHHHHHHHHhhcCCEEEEEec
Confidence 7999985542 1 245667789999999987653
No 304
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=97.32 E-value=0.00028 Score=66.06 Aligned_cols=99 Identities=11% Similarity=0.054 Sum_probs=68.6
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc----cCcCCCCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN----VSSALKDY 194 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~----l~~~l~~f 194 (318)
..++++||.+|+|++|..++.+|+.. .|++|+++|.+++..+.++++-. ..-+.+...|..+ +. .-..+
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~-~g~~Vi~~~~~~~r~~~~~~~Ga-----~~~i~~~~~~~~~~v~~~t-~g~g~ 233 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNV-FGAKVIAVDINQDKLNLAKKIGA-----DVTINSGDVNPVDEIKKIT-GGLGV 233 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-SCCEEEEEESCHHHHHHHHHTTC-----SEEEEC-CCCHHHHHHHHT-TSSCE
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHh-CCCEEEEEECcHHHhhhhhhcCC-----eEEEeCCCCCHHHHhhhhc-CCCCc
Confidence 47889999999999888888888753 68999999999998888776432 2223332233221 21 11267
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|.++.++.- ...+....+.+++||++++-.
T Consensus 234 d~~~~~~~~-------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 234 QSAIVCAVA-------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEEEECCSC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred eEEEEeccC-------cchhheeheeecCCceEEEEe
Confidence 888766521 335667778999999988765
No 305
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=97.31 E-value=0.00049 Score=65.52 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=67.5
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEE--Ecccc----ccCcCC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFH--TTDIM----NVSSAL 191 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~--~gDa~----~l~~~l 191 (318)
..++++||.+|+|++|+.++.+|+.. |+ +|+++|.+++..+.|+++ |...-+.+. ..|.. ++..
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~--Ga~~Vi~~~~~~~~~~~a~~l-----Ga~~vi~~~~~~~~~~~~i~~~~~-- 261 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTA--GASRIIGIDIDSKKYETAKKF-----GVNEFVNPKDHDKPIQEVIVDLTD-- 261 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHH--TCSCEEEECSCTTHHHHHHTT-----TCCEEECGGGCSSCHHHHHHHHTT--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHc-----CCcEEEccccCchhHHHHHHHhcC--
Confidence 47889999999999999999999864 88 899999999998887653 332111110 01111 1211
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCC-eEEEEEc
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPG-ALLMLRS 231 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpG-g~lv~r~ 231 (318)
+.+|+||-.. | ....++...+.|+|| |++++-.
T Consensus 262 gg~D~vid~~--g-----~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 262 GGVDYSFECI--G-----NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SCBSEEEECS--C-----CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECC--C-----CHHHHHHHHHHhhccCCEEEEEc
Confidence 2799999554 2 134577788999997 9988765
No 306
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=97.31 E-value=0.00014 Score=68.32 Aligned_cols=99 Identities=14% Similarity=0.078 Sum_probs=69.0
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccc----ccCcCCCCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIM----NVSSALKDY 194 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~----~l~~~l~~f 194 (318)
..++++||.+|+|++|..++.+|+.. .+++|+++|.+++..+.++++ |...-+.. ..|.. ++. .-..+
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~-g~~~Vi~~~~~~~~~~~~~~l-----Ga~~~i~~-~~~~~~~v~~~t-~g~g~ 240 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAV-SAARVIAVDLDDDRLALAREV-----GADAAVKS-GAGAADAIRELT-GGQGA 240 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESCHHHHHHHHHT-----TCSEEEEC-STTHHHHHHHHH-GGGCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHc-----CCCEEEcC-CCcHHHHHHHHh-CCCCC
Confidence 47889999999999999999999863 478999999999998888764 32211111 00111 111 11279
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|+||-.. | ....++...+.|+|||++++-..
T Consensus 241 d~v~d~~--G-----~~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 241 TAVFDFV--G-----AQSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp EEEEESS--C-----CHHHHHHHHHHEEEEEEEEECSC
T ss_pred eEEEECC--C-----CHHHHHHHHHHHhcCCEEEEECC
Confidence 9998544 2 12367778899999999987653
No 307
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=97.30 E-value=0.00078 Score=62.59 Aligned_cols=94 Identities=10% Similarity=-0.028 Sum_probs=63.4
Q ss_pred cCCCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc-cCcCCCCccE
Q 021008 119 SRFPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN-VSSALKDYEV 196 (318)
Q Consensus 119 ~~~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~-l~~~l~~fD~ 196 (318)
..++++||.+| +|++|+.++.+|+. .|++|++++ +++..+.++++ |... ++..+-.+ +......+|+
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~--~Ga~vi~~~-~~~~~~~~~~l-----Ga~~---~i~~~~~~~~~~~~~g~D~ 218 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQ--KGTTVITTA-SKRNHAFLKAL-----GAEQ---CINYHEEDFLLAISTPVDA 218 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEE-CHHHHHHHHHH-----TCSE---EEETTTSCHHHHCCSCEEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHH--cCCEEEEEe-ccchHHHHHHc-----CCCE---EEeCCCcchhhhhccCCCE
Confidence 47889999997 99999999999986 499999998 45445665543 3321 22211112 2233357999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
||-.. | . . .+....+.|+|||+++.-.
T Consensus 219 v~d~~--g----~-~-~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 219 VIDLV--G----G-D-VGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp EEESS--C----H-H-HHHHHGGGEEEEEEEEECC
T ss_pred EEECC--C----c-H-HHHHHHHhccCCCEEEEeC
Confidence 98543 2 1 1 2367789999999998753
No 308
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.28 E-value=8.2e-05 Score=72.31 Aligned_cols=100 Identities=19% Similarity=0.257 Sum_probs=68.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc-----------------
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT----------------- 182 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g----------------- 182 (318)
.++.+|+.||.|++|..+..+++.+ |++|+++|++++..+.++++-. +|+..
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~lGa---------~~~~l~~~~~~~~gya~~~~~~ 250 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRSVGA---------QWLDLGIDAAGEGGYARELSEA 250 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHTTC---------EECCCC-------------CHH
T ss_pred cCCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCC---------eEEeccccccccccchhhhhHH
Confidence 4789999999999999999998875 9999999999998888765311 12110
Q ss_pred ----cccccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 183 ----DIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 183 ----Da~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+..++......+|+|+...+++-...++ -+-+++.+.||||++++=-.
T Consensus 251 ~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~-Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 251 ERAQQQQALEDAITKFDIVITTALVPGRPAPR-LVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCTTSCCCC-CBCHHHHHTSCTTCEEEETT
T ss_pred HHhhhHHHHHHHHhcCCEEEECCCCCCcccce-eecHHHHhcCCCCcEEEEEe
Confidence 1112223345899999876653211111 13467789999998776544
No 309
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.27 E-value=0.0001 Score=72.17 Aligned_cols=109 Identities=18% Similarity=0.216 Sum_probs=68.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCC-------CCeE-EEE--------cc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLS-------TRMF-FHT--------TD 183 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~-------~ri~-f~~--------gD 183 (318)
.++.+|+.||+|++|..+..+++.+ |++|+.+|++++..+.++++-..-..+. .... |.. ..
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~ 265 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ 265 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhh
Confidence 4789999999999999999999864 9999999999998888776311100000 0000 000 00
Q ss_pred ccccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 184 IMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 184 a~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..++.......|+|+..++++-...++ -+-+++.+.||||++++=-.
T Consensus 266 ~~~l~e~l~~aDVVI~tvlipg~~ap~-Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 266 AALVAEHIAKQDIVITTALIPGRPAPR-LVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSCCCC-CBCHHHHTTSCTTCEEEETT
T ss_pred HhHHHHHhcCCCEEEECCcCCCCCCCE-EecHHHHhcCCCCCEEEEEe
Confidence 011212234789999877663221211 13467789999998876554
No 310
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.26 E-value=0.0008 Score=71.09 Aligned_cols=112 Identities=11% Similarity=0.043 Sum_probs=71.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCC---CcEEEEEeCChHHHHHH--HHHhhcCCCCC---CCeEEEEccccccC-cC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLT---TTCFDNYDIDPSANSKA--LSLVSSDPDLS---TRMFFHTTDIMNVS-SA 190 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~---ga~V~gvDid~~ai~~A--r~~~~~~~gl~---~ri~f~~gDa~~l~-~~ 190 (318)
.++.+|+|.|||.+++. +.++++. + ..+++|+|+|+.+++.| +..... .++. ....+...|..+.. ..
T Consensus 320 ~~g~rVLDPaCGSG~FL-IaaA~~l-~ei~~~~IyGvEIDp~Al~LAK~RlNL~l-N~LlhGi~~~~I~~dD~L~~~~~~ 396 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLL-ATVSAGF-NNVMPRQIWANDIETLFLELLSIRLGLLF-PQLVSSNNAPTITGEDVCSLNPED 396 (878)
T ss_dssp CTTCEEEETTCTTSHHH-HHHHHTS-TTCCGGGEEEECSCGGGHHHHHHHHHTTS-TTTCBTTBCCEEECCCGGGCCGGG
T ss_pred CCCCEEEECCCCccHHH-HHHHHHh-cccCCCeEEEEECCHHHHHHHHHHHHHHH-hhhhcCCCcceEEecchhcccccc
Confidence 35789999999986665 4555532 3 46899999999999999 544432 1221 22356666766532 23
Q ss_pred CCCccEEEecc-c---cCCChh------------------------HHHHHHHHHHHhccCCeEEEEEcCCC
Q 021008 191 LKDYEVVFLAA-L---VGMDKD------------------------EKIRVIDHLAKYMAPGALLMLRSAHG 234 (318)
Q Consensus 191 l~~fD~V~~aa-l---vgm~~~------------------------~k~~vl~~l~r~LkpGg~lv~r~~~g 234 (318)
...||+|+..= + ..++.. -...+++++.+.|+|||++++-.+++
T Consensus 397 ~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 397 FANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp GTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred cCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 35899998421 1 011110 12347889999999999988766544
No 311
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=97.26 E-value=0.001 Score=63.95 Aligned_cols=100 Identities=11% Similarity=0.110 Sum_probs=65.5
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccc----cccCcCCCC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDI----MNVSSALKD 193 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa----~~l~~~l~~ 193 (318)
..++++||.+|+|++|..++.+|+. .|+ +|+++|.+++..+.++++-.. .-+.....|. .++. .-..
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~~~~lGa~-----~vi~~~~~~~~~~i~~~t-~g~g 282 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKH--AGASKVILSEPSEVRRNLAKELGAD-----HVIDPTKENFVEAVLDYT-NGLG 282 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCHHHHHHHHHHTCS-----EEECTTTSCHHHHHHHHT-TTCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHcCCC-----EEEcCCCCCHHHHHHHHh-CCCC
Confidence 4688999999999999999999986 488 999999999999998765321 1000000111 1121 1126
Q ss_pred ccEEEeccccCCChhHHHHHHHHHHHhc----cCCeEEEEEcC
Q 021008 194 YEVVFLAALVGMDKDEKIRVIDHLAKYM----APGALLMLRSA 232 (318)
Q Consensus 194 fD~V~~aalvgm~~~~k~~vl~~l~r~L----kpGg~lv~r~~ 232 (318)
+|+||-.. | .....+..+.+.| ++||++++-..
T Consensus 283 ~D~vid~~--g----~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 283 AKLFLEAT--G----VPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CSEEEECS--S----CHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCEEEECC--C----CcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 99999543 2 1122334444445 99999988653
No 312
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.25 E-value=0.00029 Score=66.30 Aligned_cols=96 Identities=14% Similarity=0.118 Sum_probs=66.2
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccc----cccCcCCCCcc
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDI----MNVSSALKDYE 195 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa----~~l~~~l~~fD 195 (318)
++++||.+|+|++|..++.+|+. .|+ +|+++|.+++..+.++++-.. .-+.....|. .++. .-..+|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~--~Ga~~Vi~~~~~~~~~~~~~~~Ga~-----~~~~~~~~~~~~~v~~~~-~g~g~D 238 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKA--SGAYPVIVSEPSDFRRELAKKVGAD-----YVINPFEEDVVKEVMDIT-DGNGVD 238 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH--TTCCSEEEECSCHHHHHHHHHHTCS-----EEECTTTSCHHHHHHHHT-TTSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHhCCC-----EEECCCCcCHHHHHHHHc-CCCCCC
Confidence 78999999999999999999986 488 999999999988888764221 0000000111 1111 112699
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+||-..- -...++...+.|++||+++.-.
T Consensus 239 ~vid~~g-------~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 239 VFLEFSG-------APKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEECSC-------CHHHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCC-------CHHHHHHHHHHHhcCCEEEEEc
Confidence 9986542 1245677789999999998765
No 313
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=97.25 E-value=0.00037 Score=66.58 Aligned_cols=95 Identities=14% Similarity=0.104 Sum_probs=66.4
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCC-cEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc------ccc----cc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTT-TCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT------DIM----NV 187 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~g-a~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g------Da~----~l 187 (318)
..++++||.+|+|++|..++.+|+. .| ++|+++|.+++..+.+++ .|.. .++.. |.. ++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~~~~-----lGa~---~vi~~~~~~~~~~~~~v~~~ 262 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARS--LGAENVIVIAGSPNRLKLAEE-----IGAD---LTLNRRETSVEERRKAIMDI 262 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHH--TTBSEEEEEESCHHHHHHHHH-----TTCS---EEEETTTSCHHHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHH--cCCceEEEEcCCHHHHHHHHH-----cCCc---EEEeccccCcchHHHHHHHH
Confidence 4678999999999999999999986 48 599999999998888764 3321 11211 111 11
Q ss_pred CcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 188 SSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 188 ~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
. .-..+|+||-..-. ...++...+.|+|||+++.-.
T Consensus 263 ~-~g~g~Dvvid~~g~-------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 263 T-HGRGADFILEATGD-------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp T-TTSCEEEEEECSSC-------TTHHHHHHHHEEEEEEEEECC
T ss_pred h-CCCCCcEEEECCCC-------HHHHHHHHHHHhcCCEEEEEe
Confidence 1 11269999855421 124666789999999998765
No 314
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=97.24 E-value=0.00032 Score=64.96 Aligned_cols=90 Identities=11% Similarity=0.057 Sum_probs=63.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++++||.+|+|++|..++.+|+.. |++|+++| +++..+.++++-.. .++ -|..++ -..||+||
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~lGa~--------~v~-~d~~~v---~~g~Dvv~ 204 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAKRGVR--------HLY-REPSQV---TQKYFAIF 204 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHHHTEE--------EEE-SSGGGC---CSCEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHHcCCC--------EEE-cCHHHh---CCCccEEE
Confidence 47889999999999999999999864 99999999 99988888764221 111 142222 23899998
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
-.. |- + .+....+.|+|||+++.-.
T Consensus 205 d~~--g~---~---~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 205 DAV--NS---Q---NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp CC---------------TTGGGEEEEEEEEEEC
T ss_pred ECC--Cc---h---hHHHHHHHhcCCCEEEEEe
Confidence 443 21 1 1245678999999988764
No 315
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=97.23 E-value=0.00014 Score=68.97 Aligned_cols=99 Identities=10% Similarity=0.116 Sum_probs=66.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCC-CCccEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSAL-KDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l-~~fD~V 197 (318)
..++++||.+|+|++|..++.+|+.+ |++|+++|.+++..+.++++ |. + ..+-..+..+..... +.||+|
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~l-----Ga-~-~v~~~~~~~~~~~~~~~~~D~v 247 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMKM-----GA-D-HYIATLEEGDWGEKYFDTFDLI 247 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHH-----TC-S-EEEEGGGTSCHHHHSCSCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHc-----CC-C-EEEcCcCchHHHHHhhcCCCEE
Confidence 47889999999999999999999864 89999999999988888764 21 1 111111110111111 479999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|-..-. .+ ...++...+.|+|||+++.-.
T Consensus 248 id~~g~-~~----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 248 VVCASS-LT----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EECCSC-ST----TCCTTTGGGGEEEEEEEEECC
T ss_pred EECCCC-Cc----HHHHHHHHHHhcCCCEEEEec
Confidence 855421 00 123455678999999998754
No 316
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.23 E-value=0.0013 Score=55.90 Aligned_cols=96 Identities=9% Similarity=-0.026 Sum_probs=63.3
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCC-CcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc---Cc--CCCCc
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLT-TTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV---SS--ALKDY 194 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~-ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l---~~--~l~~f 194 (318)
.+++|+.+|+|.+|.......++ . |..|+++|.|++.++.+++ .| +.++.+|..+. .. ...++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~--~~g~~V~vid~~~~~~~~~~~-----~g----~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRA--RYGKISLGIEIREEAAQQHRS-----EG----RNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHH--HHCSCEEEEESCHHHHHHHHH-----TT----CCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--ccCCeEEEEECCHHHHHHHHH-----CC----CCEEEcCCCCHHHHHhccCCCCC
Confidence 35799999999887765544432 4 7899999999987766542 22 35667887652 11 24579
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+|++..- + ......+-...+.+.|++.++.+.
T Consensus 107 d~vi~~~~---~-~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAMP---H-HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECCS---S-HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred CEEEEeCC---C-hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 99887541 2 222333344667788888888765
No 317
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=97.23 E-value=0.00094 Score=63.42 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=67.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc----cccc-cCc-CC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT----DIMN-VSS-AL 191 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g----Da~~-l~~-~l 191 (318)
..++++||.+|+|++|..++.+|+.. |+ +|+++|.+++..+.++++ |.. ..+-.. |..+ +.. ..
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l-----Ga~--~vi~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKAL-----GAT--DCLNPRELDKPVQDVITELTA 263 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHT-----TCS--EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHh-----CCc--EEEccccccchHHHHHHHHhC
Confidence 46789999999999999999999864 88 899999999988887653 321 111111 1111 100 01
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCC-eEEEEEcC
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPG-ALLMLRSA 232 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpG-g~lv~r~~ 232 (318)
+.+|+||-.. | . ...++...+.|++| |++++-..
T Consensus 264 ~g~Dvvid~~--G-~----~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 264 GGVDYSLDCA--G-T----AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SCBSEEEESS--C-C----HHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCccEEEECC--C-C----HHHHHHHHHHhhcCCCEEEEECC
Confidence 2799998554 2 1 24567778999999 99987543
No 318
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=97.23 E-value=0.00083 Score=63.71 Aligned_cols=95 Identities=14% Similarity=0.122 Sum_probs=67.2
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc----ccc----ccCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT----DIM----NVSS 189 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g----Da~----~l~~ 189 (318)
..++++||.+|+|++|..++.+|+.. |+ +|+++|.+++..+.++++ |.. ..+-.. |.. ++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l-----Ga~--~vi~~~~~~~~~~~~i~~~t- 258 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAA--GASRIIGVGTHKDKFPKAIEL-----GAT--ECLNPKDYDKPIYEVICEKT- 258 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHT-----TCS--EEECGGGCSSCHHHHHHHHT-
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEECCCHHHHHHHHHc-----CCc--EEEecccccchHHHHHHHHh-
Confidence 46889999999999999999999864 88 899999999988888653 321 111111 111 111
Q ss_pred CCCCccEEEeccccCCChhHHHHHHHHHHHhccCC-eEEEEEc
Q 021008 190 ALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPG-ALLMLRS 231 (318)
Q Consensus 190 ~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpG-g~lv~r~ 231 (318)
. +.+|+||-.. | ....++...+.|+|| |+++.-.
T Consensus 259 ~-gg~Dvvid~~--g-----~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 259 N-GGVDYAVECA--G-----RIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp T-SCBSEEEECS--C-----CHHHHHHHHHTBCTTTCEEEECC
T ss_pred C-CCCCEEEECC--C-----CHHHHHHHHHHHhcCCCEEEEEc
Confidence 1 3799999554 2 124577778999999 9988754
No 319
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=97.22 E-value=0.0002 Score=67.80 Aligned_cols=98 Identities=11% Similarity=0.086 Sum_probs=65.1
Q ss_pred cC-CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEE
Q 021008 119 SR-FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVV 197 (318)
Q Consensus 119 ~~-~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V 197 (318)
.. ++++||.+|+|++|..++.+|+.. |++|+++|.+++..+.+++ + .|.. .+ +-..|...+....+.+|+|
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~---~-lGa~-~v-i~~~~~~~~~~~~~g~D~v 248 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQ---D-LGAD-DY-VIGSDQAKMSELADSLDYV 248 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHT---T-SCCS-CE-EETTCHHHHHHSTTTEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHH---H-cCCc-ee-eccccHHHHHHhcCCCCEE
Confidence 35 889999999999999999999864 8999999999987777652 2 3432 11 1111211111112379999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|-..-. + ..++...+.|+|||+++.-.
T Consensus 249 id~~g~--~-----~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 249 IDTVPV--H-----HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EECCCS--C-----CCSHHHHTTEEEEEEEEECS
T ss_pred EECCCC--h-----HHHHHHHHHhccCCEEEEeC
Confidence 854421 1 12444568999999998754
No 320
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=97.20 E-value=0.0011 Score=63.00 Aligned_cols=97 Identities=16% Similarity=0.223 Sum_probs=67.0
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc----ccc-cCc-CC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD----IMN-VSS-AL 191 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD----a~~-l~~-~l 191 (318)
..++++||.+|+|++|..++.+|+. .|+ +|+++|.+++..+.++++ |.. ..+-..+ ..+ +.. ..
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~~Vi~~~~~~~~~~~~~~l-----Ga~--~vi~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHS--AGAKRIIAVDLNPDKFEKAKVF-----GAT--DFVNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCGGGHHHHHHT-----TCC--EEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCHHHHHHHHHh-----CCc--eEEeccccchhHHHHHHHHhC
Confidence 4678999999999999999999986 488 899999999998888753 321 1111111 111 000 01
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCC-eEEEEEc
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPG-ALLMLRS 231 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpG-g~lv~r~ 231 (318)
+.+|+||-.. | ....++...+.|+|| |+++.-.
T Consensus 261 ~g~D~vid~~--g-----~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 261 GGVDFSLECV--G-----NVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp SCBSEEEECS--C-----CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECC--C-----CHHHHHHHHHHhhcCCcEEEEEc
Confidence 3699998554 2 123567778999999 9988755
No 321
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.20 E-value=0.00018 Score=68.74 Aligned_cols=103 Identities=19% Similarity=0.252 Sum_probs=67.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++++|+.+|+|+.|..++.+++.. |++|+.+|++++..+.+++.... .+.....+..++......+|+|+.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~DvVI~ 236 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGS------RVELLYSNSAEIETAVAEADLLIG 236 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGG------GSEEEECCHHHHHHHHHTCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCc------eeEeeeCCHHHHHHHHcCCCEEEE
Confidence 3569999999999999999888864 88999999999888887765432 222222222222222337999997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+++.... .-+.++..+.|+|||+++--.
T Consensus 237 ~~~~~~~~~~-~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 237 AVLVPGRRAP-ILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp CCCCTTSSCC-CCBCHHHHTTSCTTCEEEETT
T ss_pred CCCcCCCCCC-eecCHHHHhhCCCCCEEEEEe
Confidence 7655331111 001334567899999887654
No 322
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.18 E-value=0.0017 Score=60.01 Aligned_cols=153 Identities=12% Similarity=0.062 Sum_probs=88.1
Q ss_pred HHhhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCe---EE
Q 021008 104 IKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRM---FF 179 (318)
Q Consensus 104 ~~L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri---~f 179 (318)
.+|.++.-. ....++.+|+|+||+|+|.|-. .|++ .+. .|.|.++-.+- ..... ......+ .|
T Consensus 60 yKL~EIdeK----~likpg~~VVDLGaAPGGWSQv-Aa~~--~~vg~V~G~vig~D~-----~~~P~-~~~~~Gv~~i~~ 126 (269)
T 2px2_A 60 AKLRWLVER----RFVQPIGKVVDLGCGRGGWSYY-AATM--KNVQEVRGYTKGGPG-----HEEPM-LMQSYGWNIVTM 126 (269)
T ss_dssp HHHHHHHHT----TSCCCCEEEEEETCTTSHHHHH-HTTS--TTEEEEEEECCCSTT-----SCCCC-CCCSTTGGGEEE
T ss_pred HHHHHHHHc----CCCCCCCEEEEcCCCCCHHHHH-Hhhh--cCCCCceeEEEcccc-----ccCCC-cccCCCceEEEe
Confidence 455555433 2348899999999999999853 4432 233 34555544321 00011 1111334 55
Q ss_pred EEc-cccccCcCCCCccEEEecccc--CCChhHHH---HHHHHHHHhccCCe-EEEEEcCCCccc-c-------------
Q 021008 180 HTT-DIMNVSSALKDYEVVFLAALV--GMDKDEKI---RVIDHLAKYMAPGA-LLMLRSAHGARA-F------------- 238 (318)
Q Consensus 180 ~~g-Da~~l~~~l~~fD~V~~aalv--gm~~~~k~---~vl~~l~r~LkpGg-~lv~r~~~g~r~-~------------- 238 (318)
..+ |..++. -..+|+|+.+.-- |...-+-. .+++-..+.|+||| .+++--..|... +
T Consensus 127 ~~G~Df~~~~--~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~F~~ 204 (269)
T 2px2_A 127 KSGVDVFYKP--SEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRRFGG 204 (269)
T ss_dssp ECSCCGGGSC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHHHCC
T ss_pred eccCCccCCC--CCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHHcCC
Confidence 557 998853 2379999976422 32222222 35666668999999 898877555211 1
Q ss_pred --cccCCCccccCCcEEEEEEcCchhHHHHH-----HHHhhc
Q 021008 239 --LYPVVDPSDLLGFEVLSVFHPTDEVINSV-----VLARKY 273 (318)
Q Consensus 239 --lYP~v~~~~l~gf~~~~~~~p~~~VvNsv-----v~ark~ 273 (318)
..|+.. .-+..|++.+-...+.++++| ++.++.
T Consensus 205 vkvk~paS--R~~S~E~YlVa~~~~n~~~~v~~~s~~l~~r~ 244 (269)
T 2px2_A 205 GLVRVPLS--RNSNHEMYWVSGASGNIVHAVNMTSQVLIGRM 244 (269)
T ss_dssp EEECCTTS--CTTCCCEEEETTCCSCHHHHHHHHHHHHHHTS
T ss_pred EEEECCCC--CCCCccEEEEecccCcHHHHHHHHHHHHHHHh
Confidence 122211 122788888888888888888 655554
No 323
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.18 E-value=0.00032 Score=67.15 Aligned_cols=88 Identities=16% Similarity=-0.007 Sum_probs=65.2
Q ss_pred hhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccc
Q 021008 106 LSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIM 185 (318)
Q Consensus 106 L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~ 185 (318)
|.+.-.+.|. +.++..++|..+|.+|.|. .++++..++++|+|+|+|++|++.|+++ ..+|++++.++..
T Consensus 45 Ll~Evl~~L~---i~pggiyVD~TlG~GGHS~-~iL~~lg~~GrVig~D~Dp~Al~~A~rL------~~~Rv~lv~~nF~ 114 (347)
T 3tka_A 45 LLDEAVNGLN---IRPDGIYIDGTFGRGGHSR-LILSQLGEEGRLLAIDRDPQAIAVAKTI------DDPRFSIIHGPFS 114 (347)
T ss_dssp TTHHHHHHTC---CCTTCEEEESCCTTSHHHH-HHHTTCCTTCEEEEEESCHHHHHHHTTC------CCTTEEEEESCGG
T ss_pred cHHHHHHhhC---CCCCCEEEEeCcCCCHHHH-HHHHhCCCCCEEEEEECCHHHHHHHHhh------cCCcEEEEeCCHH
Confidence 5555555543 4678999999999777775 5665555789999999999999999532 2479999999988
Q ss_pred ccCc-----CCC-CccEEEecccc
Q 021008 186 NVSS-----ALK-DYEVVFLAALV 203 (318)
Q Consensus 186 ~l~~-----~l~-~fD~V~~aalv 203 (318)
++.. .+. ++|.|+++--|
T Consensus 115 ~l~~~L~~~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 115 ALGEYVAERDLIGKIDGILLDLGV 138 (347)
T ss_dssp GHHHHHHHTTCTTCEEEEEEECSC
T ss_pred HHHHHHHhcCCCCcccEEEECCcc
Confidence 7632 222 59988877655
No 324
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.17 E-value=0.0014 Score=61.85 Aligned_cols=99 Identities=16% Similarity=0.179 Sum_probs=68.5
Q ss_pred CCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhh-------cCCCCC----------CCeEEEEcc
Q 021008 122 PTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVS-------SDPDLS----------TRMFFHTTD 183 (318)
Q Consensus 122 ~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~-------~~~gl~----------~ri~f~~gD 183 (318)
-++|.+||+|.+|.+- ..+++ .|..|+.+|++++.++.+++.++ + .|+- .++++. .|
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~---~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~-~G~~~g~~~~~~~~~~i~~~-~~ 80 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFAS---GGFRVKLYDIEPRQITGALENIRKEMKSLQQ-SGSLKGSLSAEEQLSLISSC-TN 80 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHHHHH-TTCCCSSSCHHHHHHTEEEE-CC
T ss_pred CceEEEEeeCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHH-cCccccccchHHHhhceEEe-CC
Confidence 4699999999887763 34444 48899999999999998865421 1 2321 145553 33
Q ss_pred ccccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 184 IMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 184 a~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
..+ .....|+|+.+.-. +..-|..+++++.+.++||.+|+..
T Consensus 81 ~~e---av~~aDlVieavpe--~~~~k~~v~~~l~~~~~~~~Ii~s~ 122 (319)
T 2dpo_A 81 LAE---AVEGVVHIQECVPE--NLDLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp HHH---HTTTEEEEEECCCS--CHHHHHHHHHHHHTTCCSSSEEEEC
T ss_pred HHH---HHhcCCEEEEeccC--CHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 322 23478999987532 3467889999999999999977644
No 325
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=97.16 E-value=0.00032 Score=66.71 Aligned_cols=95 Identities=17% Similarity=0.192 Sum_probs=66.0
Q ss_pred CCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc-ccc-ccCc-CCCCccE
Q 021008 121 FPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT-DIM-NVSS-ALKDYEV 196 (318)
Q Consensus 121 ~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g-Da~-~l~~-~l~~fD~ 196 (318)
++++||.+| +|++|..++.+|+.+ .|++|+++|.+++..+.++++ |.. ..+-.. |.. .+.. ..+.+|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~-~g~~Vi~~~~~~~~~~~~~~l-----Gad--~vi~~~~~~~~~v~~~~~~g~Dv 242 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQR-TDLTVIATASRPETQEWVKSL-----GAH--HVIDHSKPLAAEVAALGLGAPAF 242 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHH-CCSEEEEECSSHHHHHHHHHT-----TCS--EEECTTSCHHHHHHTTCSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHHc-----CCC--EEEeCCCCHHHHHHHhcCCCceE
Confidence 678999999 999999999999852 589999999999988888653 321 111101 111 1111 1237999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
||-..- -...++...+.|+|||++++-
T Consensus 243 vid~~g-------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 243 VFSTTH-------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEECSC-------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEECCC-------chhhHHHHHHHhcCCCEEEEE
Confidence 985441 234677788999999999875
No 326
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.16 E-value=0.00035 Score=65.15 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=70.2
Q ss_pred HHHhhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCC-eEEEE
Q 021008 103 YIKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTR-MFFHT 181 (318)
Q Consensus 103 y~~L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~r-i~f~~ 181 (318)
..+|.++.-. +...++.+|||+||||+|.+-.+ +++. +-..|+|+|+.......+.. ... .+.+ +.|..
T Consensus 76 AfKL~ei~eK----~~Lk~~~~VLDLGaAPGGWsQvA-a~~~-gv~sV~GvdvG~d~~~~pi~-~~~---~g~~ii~~~~ 145 (282)
T 3gcz_A 76 SAKLRWMEER----GYVKPTGIVVDLGCGRGGWSYYA-ASLK-NVKKVMAFTLGVQGHEKPIM-RTT---LGWNLIRFKD 145 (282)
T ss_dssp HHHHHHHHHT----TSCCCCEEEEEETCTTCHHHHHH-HTST-TEEEEEEECCCCTTSCCCCC-CCB---TTGGGEEEEC
T ss_pred HHHHHHHHHh----cCCCCCCEEEEeCCCCCHHHHHH-HHhc-CCCeeeeEEeccCccccccc-ccc---CCCceEEeeC
Confidence 3455554422 33477889999999999999643 3332 44579999998653221110 011 1223 33433
Q ss_pred c-cccccCcCCCCccEEEecccc--CCChhHH---HHHHHHHHHhccCC--eEEEEEcCC
Q 021008 182 T-DIMNVSSALKDYEVVFLAALV--GMDKDEK---IRVIDHLAKYMAPG--ALLMLRSAH 233 (318)
Q Consensus 182 g-Da~~l~~~l~~fD~V~~aalv--gm~~~~k---~~vl~~l~r~LkpG--g~lv~r~~~ 233 (318)
. |+.+++ ...+|+|+.+... |...-+- ..+++-..+.|+|| |.+++--..
T Consensus 146 ~~dv~~l~--~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 146 KTDVFNME--VIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp SCCGGGSC--CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CcchhhcC--CCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 3 554543 2489999976432 3211121 23566667899999 999997766
No 327
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=97.15 E-value=0.00036 Score=64.26 Aligned_cols=95 Identities=14% Similarity=0.107 Sum_probs=65.7
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEE
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVV 197 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V 197 (318)
..++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.++++ |.. ..+-..+..++....+.+|+|
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~-----ga~--~~~~~~~~~~~~~~~~~~d~v 193 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARA--MGLRVLAAASRPEKLALPLAL-----GAE--EAATYAEVPERAKAWGGLDLV 193 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSGGGSHHHHHT-----TCS--EEEEGGGHHHHHHHTTSEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHhc-----CCC--EEEECCcchhHHHHhcCceEE
Confidence 468899999997 8899999999986 489999999999888877652 321 111111101121122579999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+- + |- ..++...+.|+|||+++.-.
T Consensus 194 id-~--g~------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 194 LE-V--RG------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EE-C--SC------TTHHHHHTTEEEEEEEEEC-
T ss_pred EE-C--CH------HHHHHHHHhhccCCEEEEEe
Confidence 86 4 31 25677789999999988754
No 328
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=97.14 E-value=0.00066 Score=63.34 Aligned_cols=96 Identities=8% Similarity=-0.004 Sum_probs=66.9
Q ss_pred cCCCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc--ccc-cC--cCCC
Q 021008 119 SRFPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD--IMN-VS--SALK 192 (318)
Q Consensus 119 ~~~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD--a~~-l~--~~l~ 192 (318)
..++++||.+| +|++|..++.+|+. .|++|+++|.+++..+.++++ |. ...+-..+ ..+ +. ..-.
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~-----ga--~~~~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKM--KGAHTIAVASTDEKLKIAKEY-----GA--EYLINASKEDILRQVLKFTNGK 216 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHT-----TC--SEEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHc-----CC--cEEEeCCCchHHHHHHHHhCCC
Confidence 36889999999 89999999999986 499999999999988877653 22 11121111 111 10 1123
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+|+-.+- . ..++...+.|+|||+++.-.
T Consensus 217 g~D~vid~~g------~--~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 217 GVDASFDSVG------K--DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CEEEEEECCG------G--GGHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCC------h--HHHHHHHHHhccCCEEEEEc
Confidence 6999986542 1 35677789999999998765
No 329
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=97.14 E-value=0.00021 Score=67.18 Aligned_cols=91 Identities=18% Similarity=0.202 Sum_probs=64.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc---cc----cccCcCCC
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT---DI----MNVSSALK 192 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g---Da----~~l~~~l~ 192 (318)
++++||.+|+|++|..++.+|+. .|+ +|+++|.+++..+.++++ .. . ++.. |. .++. -.
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~--~Ga~~Vi~~~~~~~~~~~~~~l-a~------~--v~~~~~~~~~~~~~~~~--~~ 230 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRA--SGAGPILVSDPNPYRLAFARPY-AD------R--LVNPLEEDLLEVVRRVT--GS 230 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHH--TTCCSEEEECSCHHHHGGGTTT-CS------E--EECTTTSCHHHHHHHHH--SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHh-HH------h--ccCcCccCHHHHHHHhc--CC
Confidence 78999999999999999999986 488 999999999887777654 21 1 1111 11 1111 13
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+||-.. | . ...++...+.|+|||+++.-.
T Consensus 231 g~D~vid~~--g-~----~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 231 GVEVLLEFS--G-N----EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp CEEEEEECS--C-C----HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECC--C-C----HHHHHHHHHHHhcCCEEEEEe
Confidence 699998554 2 1 235677789999999988765
No 330
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=97.13 E-value=0.0013 Score=62.32 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=67.3
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc----ccc-cCc-CC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD----IMN-VSS-AL 191 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD----a~~-l~~-~l 191 (318)
..++++||.+|+|++|..++.+|+.. |+ +|+++|.+++..+.++++ |.. ..+-..+ ..+ +.. ..
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~--Ga~~Vi~~~~~~~~~~~~~~l-----Ga~--~vi~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVA--GASRIIGVDINKDKFARAKEF-----GAT--ECINPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHH-----TCS--EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHc-----CCc--eEeccccccccHHHHHHHHhC
Confidence 46889999999999999999999864 88 899999999999988764 221 1111111 111 100 11
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCC-eEEEEEc
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPG-ALLMLRS 231 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpG-g~lv~r~ 231 (318)
+.+|+||-..-. ...++...+.|+|| |+++.-.
T Consensus 259 ~g~D~vid~~g~-------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 259 GGVDYSFECIGN-------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp SCBSEEEECSCC-------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCCc-------HHHHHHHHHhhccCCcEEEEEe
Confidence 379999855421 23567778999999 9998755
No 331
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=97.13 E-value=0.0006 Score=63.49 Aligned_cols=96 Identities=14% Similarity=0.041 Sum_probs=67.5
Q ss_pred cCCCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc--cc----ccCcCC
Q 021008 119 SRFPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD--IM----NVSSAL 191 (318)
Q Consensus 119 ~~~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD--a~----~l~~~l 191 (318)
..++++||.+| +|++|..++.+|+. .|++|+++|.+++..+.++++-. ...+-..+ .. ++. .-
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~Ga-------~~~~~~~~~~~~~~~~~~~-~~ 207 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKA--LGAKLIGTVSSPEKAAHAKALGA-------WETIDYSHEDVAKRVLELT-DG 207 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHTC-------SEEEETTTSCHHHHHHHHT-TT
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCC-------CEEEeCCCccHHHHHHHHh-CC
Confidence 36789999999 89999999999986 49999999999999888876421 11121111 11 111 11
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
..+|+|+-.+- . ..+....+.|+|||+++.-..
T Consensus 208 ~g~Dvvid~~g------~--~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 208 KKCPVVYDGVG------Q--DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp CCEEEEEESSC------G--GGHHHHHTTEEEEEEEEECCC
T ss_pred CCceEEEECCC------h--HHHHHHHHHhcCCCEEEEEec
Confidence 37999986542 1 356677899999999988653
No 332
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.12 E-value=0.00081 Score=61.75 Aligned_cols=102 Identities=19% Similarity=0.203 Sum_probs=68.9
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcC-------C-CCC--------CCeEEEEcccc
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSD-------P-DLS--------TRMFFHTTDIM 185 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~-------~-gl~--------~ri~f~~gDa~ 185 (318)
-++|..||+|.+|......... .|..|+.+|++++.++.+++.+... . ++. .++++ ..|..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAF--HGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 3699999999887764433333 4899999999999998887653210 0 111 12343 23332
Q ss_pred ccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 186 NVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 186 ~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+ .....|+|+.+.-. +.+.|..+++++.+.++||.+++-..
T Consensus 81 ~---~~~~aDlVi~av~~--~~~~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 81 Q---AVKDADLVIEAVPE--SLDLKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp H---HTTTCSEEEECCCS--CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred H---HhccCCEEEEeccC--cHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 2 23578999987532 44688999999999999998876433
No 333
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=97.12 E-value=0.0015 Score=61.94 Aligned_cols=97 Identities=13% Similarity=0.140 Sum_probs=66.7
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc----ccc-cCc-CC
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD----IMN-VSS-AL 191 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD----a~~-l~~-~l 191 (318)
..++++||.+|+|++|..++.+|+. .|+ +|+++|.+++..+.++++ |.. ..+-..+ ..+ +.. ..
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~--~Ga~~Vi~~~~~~~~~~~~~~l-----Ga~--~vi~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKA--AGAARIIGVDINKDKFAKAKEV-----GAT--ECVNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCGGGHHHHHHT-----TCS--EEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHHh-----CCc--eEecccccchhHHHHHHHHhC
Confidence 4678999999999999999999986 488 899999999998888653 321 1111111 111 100 11
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCC-eEEEEEc
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPG-ALLMLRS 231 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpG-g~lv~r~ 231 (318)
+.+|+||-.. | . ...++...+.|++| |++++-.
T Consensus 260 ~g~D~vid~~--g-~----~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 260 GGVDFSFEVI--G-R----LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SCBSEEEECS--C-C----HHHHHHHHHHBCTTTCEEEECS
T ss_pred CCCcEEEECC--C-C----HHHHHHHHHHhhcCCcEEEEec
Confidence 3799998554 2 1 23567778999999 9988754
No 334
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.09 E-value=0.0022 Score=60.12 Aligned_cols=92 Identities=18% Similarity=0.160 Sum_probs=62.7
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCc--EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTTT--CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~ga--~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.++|.+||+|.+|.+-....++ .|. +|+++|.+++..+.+++ .|..++ ...|..++ .....|+|++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~--~G~~~~V~~~dr~~~~~~~a~~-----~G~~~~---~~~~~~~~--~~~~aDvVil 100 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR--SGFKGKIYGYDINPESISKAVD-----LGIIDE---GTTSIAKV--EDFSPDFVML 100 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH--TTCCSEEEEECSCHHHHHHHHH-----TTSCSE---EESCTTGG--GGGCCSEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHh--CCCCCEEEEEECCHHHHHHHHH-----CCCcch---hcCCHHHH--hhccCCEEEE
Confidence 3799999999888764333333 366 99999999988877653 233221 12333220 2347899998
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
+. +.....++++++.+.++||.+|+-
T Consensus 101 av----p~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 101 SS----PVRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp CS----CGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred eC----CHHHHHHHHHHHhhccCCCcEEEE
Confidence 76 345667899999999999987653
No 335
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.08 E-value=0.0012 Score=54.74 Aligned_cols=99 Identities=19% Similarity=0.127 Sum_probs=64.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc---cCc-CCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN---VSS-ALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~---l~~-~l~~fD 195 (318)
..+++|+.+|+|++|......++. .|..|+.+|.+++..+.++ .. ....++.+|..+ +.. ....+|
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~--~g~~V~vid~~~~~~~~~~---~~-----~g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASS--SGHSVVVVDKNEYAFHRLN---SE-----FSGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGGGGGGSC---TT-----CCSEEEESCTTSHHHHHTTTGGGCS
T ss_pred cCCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHH---hc-----CCCcEEEecCCCHHHHHHcCcccCC
Confidence 567899999999888776555554 4889999999987544321 02 234566777654 211 234799
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
+|+++.- .......+..+.+.+.|...++.+..
T Consensus 87 ~Vi~~~~----~~~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 87 MVFAFTN----DDSTNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp EEEECSS----CHHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred EEEEEeC----CcHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 9987652 23334455556677777777777663
No 336
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=97.08 E-value=0.00029 Score=66.32 Aligned_cols=95 Identities=9% Similarity=0.051 Sum_probs=66.0
Q ss_pred CCCEEEEE-ccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEE-ccccc-cC-cCCCCccE
Q 021008 121 FPTKIAFI-GSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHT-TDIMN-VS-SALKDYEV 196 (318)
Q Consensus 121 ~~~rVL~I-GsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~-gDa~~-l~-~~l~~fD~ 196 (318)
++++||.+ |+|++|..++.+|+. .|++|+++|.+++..+.++++-.. . .+-. .|..+ +. .....||+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~------~-vi~~~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA--YGLRVITTASRNETIEWTKKMGAD------I-VLNHKESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH--TTCEEEEECCSHHHHHHHHHHTCS------E-EECTTSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhcCCc------E-EEECCccHHHHHHHhCCCCccE
Confidence 78999999 799999999999986 499999999999998888874221 1 1100 01111 10 11237999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+-..- ....++...+.|+|||+++.-.
T Consensus 221 v~d~~g-------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 221 VFCTFN-------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EEESSC-------HHHHHHHHHHHEEEEEEEEESS
T ss_pred EEECCC-------chHHHHHHHHHhccCCEEEEEC
Confidence 986541 2346677789999999997643
No 337
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.08 E-value=0.00037 Score=66.26 Aligned_cols=98 Identities=15% Similarity=0.122 Sum_probs=64.8
Q ss_pred cC-CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEE
Q 021008 119 SR-FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVV 197 (318)
Q Consensus 119 ~~-~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V 197 (318)
.. ++++||.+|+|++|..++.+|+. .|++|+++|.+++..+.+++ + .|. ...+-..+...+....+.+|+|
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~---~-lGa--~~v~~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKA--FGSKVTVISTSPSKKEEALK---N-FGA--DSFLVSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCGGGHHHHHH---T-SCC--SEEEETTCHHHHHHTTTCEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH---h-cCC--ceEEeccCHHHHHHhhCCCCEE
Confidence 35 88999999999999999999986 48999999999988777652 2 332 1112111111111112479999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+-..-. +. .++...+.|++||+++.-.
T Consensus 256 id~~g~--~~-----~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 256 IDTVSA--VH-----PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EECCSS--CC-----CSHHHHHHEEEEEEEEECC
T ss_pred EECCCc--HH-----HHHHHHHHHhcCCEEEEEc
Confidence 855421 11 2344568899999988755
No 338
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=97.07 E-value=0.0011 Score=62.78 Aligned_cols=96 Identities=11% Similarity=0.045 Sum_probs=67.0
Q ss_pred cCCCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEE--ccccc-cCc-CCCC
Q 021008 119 SRFPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHT--TDIMN-VSS-ALKD 193 (318)
Q Consensus 119 ~~~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~--gDa~~-l~~-~l~~ 193 (318)
..++++||.+| +|++|..++.+|+. .|++|+++|.+++..+.++++ |. ...+-. .|..+ +.. .-..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~~-----Ga--~~~~~~~~~~~~~~~~~~~~~g 231 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKK--AKCHVIGTCSSDEKSAFLKSL-----GC--DRPINYKTEPVGTVLKQEYPEG 231 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHT-----TC--SEEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHHc-----CC--cEEEecCChhHHHHHHHhcCCC
Confidence 46889999999 79999999999986 499999999999888887653 32 111111 11111 100 1136
Q ss_pred ccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 194 YEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 194 fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+|+-.+ | . ..++...+.|++||++++-.
T Consensus 232 ~D~vid~~--g----~--~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 232 VDVVYESV--G----G--AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEEEEECS--C----T--HHHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECC--C----H--HHHHHHHHHHhcCCEEEEEe
Confidence 99998654 2 1 36777889999999988755
No 339
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.05 E-value=0.0037 Score=58.91 Aligned_cols=100 Identities=15% Similarity=0.173 Sum_probs=66.2
Q ss_pred cCCCCEEEEEcc----CCChHHHHHHHHhCCC-CcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCC
Q 021008 119 SRFPTKIAFIGS----GPLPLTSIVLAINHLT-TTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKD 193 (318)
Q Consensus 119 ~~~~~rVL~IGs----Gplp~tai~LA~~~~~-ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~ 193 (318)
.+.+.|||++|+ |.-|.| ..+.+. +| |+.|+++|+.+-. . ... .|++||..++.. .+.
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS-~VLr~~-~p~g~~VVavDL~~~~---------s----da~-~~IqGD~~~~~~-~~k 169 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT-AVLRQW-LPTGTLLVDSDLNDFV---------S----DAD-STLIGDCATVHT-ANK 169 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH-HHHHHH-SCTTCEEEEEESSCCB---------C----SSS-EEEESCGGGEEE-SSC
T ss_pred ecCCCEEEeCCCCCCCCCCCcH-HHHHHh-CCCCcEEEEeeCcccc---------c----CCC-eEEEcccccccc-CCC
Confidence 478899999997 335666 355544 56 4799999998821 1 122 569999877543 358
Q ss_pred ccEEEecccc---CC-Ch------hHHHHHHHHHHHhccCCeEEEEEcCCCc
Q 021008 194 YEVVFLAALV---GM-DK------DEKIRVIDHLAKYMAPGALLMLRSAHGA 235 (318)
Q Consensus 194 fD~V~~aalv---gm-~~------~~k~~vl~~l~r~LkpGg~lv~r~~~g~ 235 (318)
||+|+.+.-- |. +. .--+.+++-+.++|+|||.|++--..|-
T Consensus 170 ~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs 221 (344)
T 3r24_A 170 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 221 (344)
T ss_dssp EEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred CCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC
Confidence 9999965422 22 11 1123455556778999999999875554
No 340
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=97.04 E-value=0.00035 Score=65.22 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=66.4
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc--cc----ccCcCC
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD--IM----NVSSAL 191 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD--a~----~l~~~l 191 (318)
..++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.+. ++ .|. ...+-..+ .. ++. .
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~---~~-~g~--~~~~~~~~~~~~~~~~~~~--~ 216 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARL--KGCRVVGIAGGAEKCRFLV---EE-LGF--DGAIDYKNEDLAAGLKREC--P 216 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHH---HT-TCC--SEEEETTTSCHHHHHHHHC--T
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHH---HH-cCC--CEEEECCCHHHHHHHHHhc--C
Confidence 478899999998 8899999999986 4999999999998877762 22 333 11121111 11 111 1
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+.+|+|+-.+ | . ..++...+.|+|||+++.-.
T Consensus 217 ~~~d~vi~~~--g----~--~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 217 KGIDVFFDNV--G----G--EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp TCEEEEEESS--C----H--HHHHHHHTTEEEEEEEEECC
T ss_pred CCceEEEECC--C----c--chHHHHHHHHhhCCEEEEEe
Confidence 3699998654 1 1 36788889999999998755
No 341
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.04 E-value=0.0017 Score=60.10 Aligned_cols=46 Identities=13% Similarity=-0.125 Sum_probs=40.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSS 169 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~ 169 (318)
.++..|||++||. |.+++..++ .|.+++|+|+++++++.|++.++.
T Consensus 234 ~~~~~vlD~f~Gs-Gt~~~~a~~---~g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGT-GTTLIAAAR---WGRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTT-THHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCC-CHHHHHHHH---cCCeEEEEeCCHHHHHHHHHHHHH
Confidence 6789999999994 778777665 489999999999999999998876
No 342
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.03 E-value=0.00022 Score=61.28 Aligned_cols=97 Identities=8% Similarity=0.048 Sum_probs=64.8
Q ss_pred cCCCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc--ccc-cC--cCCC
Q 021008 119 SRFPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD--IMN-VS--SALK 192 (318)
Q Consensus 119 ~~~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD--a~~-l~--~~l~ 192 (318)
..++++||.+| +|++|..+..+++. .|++|+++|.+++..+.+++ .|. ...+-..+ ..+ +. ....
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~--~G~~V~~~~~~~~~~~~~~~-----~g~--~~~~d~~~~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKM--IGARIYTTAGSDAKREMLSR-----LGV--EYVGDSRSVDFADEILELTDGY 106 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHT-----TCC--SEEEETTCSTHHHHHHHHTTTC
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHH-----cCC--CEEeeCCcHHHHHHHHHHhCCC
Confidence 36789999999 68789888888875 38999999999987776643 232 11121111 100 10 0113
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
.+|+|+..+ | ...++...+.|+|||+++.-..
T Consensus 107 ~~D~vi~~~--g------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 107 GVDVVLNSL--A------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp CEEEEEECC--C------THHHHHHHHTEEEEEEEEECSC
T ss_pred CCeEEEECC--c------hHHHHHHHHHhccCCEEEEEcC
Confidence 699998654 2 1357778899999999987653
No 343
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=97.01 E-value=0.0068 Score=59.82 Aligned_cols=99 Identities=17% Similarity=0.252 Sum_probs=66.8
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc------------CCCC-CCCeEEEEccccccC
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSS------------DPDL-STRMFFHTTDIMNVS 188 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~------------~~gl-~~ri~f~~gDa~~l~ 188 (318)
-++|..||+|.+|......... .|..|+.+|++++.++.+++.... .... ....++ +.|..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~--~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~--- 110 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR--VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTK--- 110 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGG---
T ss_pred CCEEEEECcCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHH---
Confidence 4689999999887654332222 488999999999999887653220 0001 112333 44432
Q ss_pred cCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 189 SALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 189 ~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
.....|+|+.+..- +..-|..+++++...++||.+|+.
T Consensus 111 -~~~~aDlVIeaVpe--~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 111 -ELSTVDLVVEAVFE--DMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp -GGTTCSEEEECCCS--CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred -HHCCCCEEEEcCCC--CHHHHHHHHHHHHhhCCCCeEEEe
Confidence 34579999987632 445688999999999999988876
No 344
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=97.01 E-value=0.00025 Score=67.07 Aligned_cols=94 Identities=16% Similarity=0.139 Sum_probs=63.1
Q ss_pred CEEEEEccCCChHHH-HHHH-HhCCCCcE-EEEEeCChH---HHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccE
Q 021008 123 TKIAFIGSGPLPLTS-IVLA-INHLTTTC-FDNYDIDPS---ANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEV 196 (318)
Q Consensus 123 ~rVL~IGsGplp~ta-i~LA-~~~~~ga~-V~gvDid~~---ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~ 196 (318)
++||.+|+|++|+.+ +.+| +. .|++ |+++|.+++ ..+.++++ |. +.+.+...|..++....+.||+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~--~Ga~~Vi~~~~~~~~~~~~~~~~~l-----Ga-~~v~~~~~~~~~i~~~~gg~Dv 245 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDD--KGYENLYCLGRRDRPDPTIDIIEEL-----DA-TYVDSRQTPVEDVPDVYEQMDF 245 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCT--TCCCEEEEEECCCSSCHHHHHHHHT-----TC-EEEETTTSCGGGHHHHSCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHH--cCCcEEEEEeCCcccHHHHHHHHHc-----CC-cccCCCccCHHHHHHhCCCCCE
Confidence 999999999999999 9999 74 4887 999999998 78887653 32 1110000111111000127999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
||-.. | . ...++...+.|+|||+++.-.
T Consensus 246 vid~~--g-~----~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 246 IYEAT--G-F----PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEECS--C-C----HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECC--C-C----hHHHHHHHHHHhcCCEEEEEe
Confidence 98554 2 1 235677789999999998765
No 345
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=97.00 E-value=0.0007 Score=63.23 Aligned_cols=99 Identities=16% Similarity=0.142 Sum_probs=67.6
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc---CcCCCCc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV---SSALKDY 194 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l---~~~l~~f 194 (318)
..++++||.+|+|++|..++.+|+.. |+ .++++|.+++..++|+++ |...-+.+...|..+. ..+...+
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~--G~~~vi~~~~~~~k~~~a~~l-----Ga~~~i~~~~~~~~~~~~~~~~~~g~ 230 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVAL--GAKSVTAIDISSEKLALAKSF-----GAMQTFNSSEMSAPQMQSVLRELRFN 230 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHT-----TCSEEEETTTSCHHHHHHHHGGGCSS
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHc--CCcEEEEEechHHHHHHHHHc-----CCeEEEeCCCCCHHHHHHhhcccCCc
Confidence 47889999999999999999999864 65 568999999988888764 3222222211221111 1123468
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+|+-..- ....++...+.++|||++++-.
T Consensus 231 d~v~d~~G-------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 231 QLILETAG-------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp EEEEECSC-------SHHHHHHHHHHCCTTCEEEECC
T ss_pred cccccccc-------ccchhhhhhheecCCeEEEEEe
Confidence 88885542 1345677789999999998765
No 346
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.00 E-value=0.0071 Score=56.83 Aligned_cols=107 Identities=14% Similarity=0.150 Sum_probs=77.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCC--CCCCeEEEEccccc-cCcCC--CCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPD--LSTRMFFHTTDIMN-VSSAL--KDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~g--l~~ri~f~~gDa~~-l~~~l--~~f 194 (318)
..++.|+.+||| ++..+..+.. ..+++|.-|| .|++++..++++.. .| ...+..++.+|+.+ +...+ ..|
T Consensus 101 ~g~~QvV~LGaG-lDTra~Rl~~--~~~~~v~evD-~P~vi~~k~~lL~~-~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~ 175 (310)
T 2uyo_A 101 DGIRQFVILASG-LDSRAYRLDW--PTGTTVYEID-QPKVLAYKSTTLAE-HGVTPTADRREVPIDLRQDWPPALRSAGF 175 (310)
T ss_dssp TTCCEEEEETCT-TCCHHHHSCC--CTTCEEEEEE-CHHHHHHHHHHHHH-TTCCCSSEEEEEECCTTSCHHHHHHHTTC
T ss_pred hCCCeEEEeCCC-CCchhhhccC--CCCcEEEEcC-CHHHHHHHHHHHHh-cCCCCCCCeEEEecchHhhHHHHHHhccC
Confidence 456799999999 7777554431 2368999999 79999999999975 33 35788999999886 10111 234
Q ss_pred c----EEEe-cccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 E----VVFL-AALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D----~V~~-aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
| ++|+ .+++ -++.++-.++++.+.....||+.|++..
T Consensus 176 d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 176 DPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp CTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred CCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 4 4443 3333 4467778899999999999999999876
No 347
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.99 E-value=0.00041 Score=66.40 Aligned_cols=103 Identities=15% Similarity=0.191 Sum_probs=65.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
..+++|+.+|+|++|..+..+++. .|++|+.+|++++..+.+++.. | ..+.....+..++......+|+|+.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~--~Ga~V~~~d~~~~~~~~~~~~~----g--~~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALG--MGAQVTILDVNHKRLQYLDDVF----G--GRVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHT----T--TSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHHhc----C--ceEEEecCCHHHHHHHHhCCCEEEE
Confidence 457999999999999998888876 4899999999998777665432 2 2232222222222222346899987
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+..... ....-+.++..+.|+|||+++.-.
T Consensus 236 ~~g~~~~-~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 236 AVLVPGA-KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CCC--------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCCCcc-ccchhHHHHHHHhhcCCCEEEEEe
Confidence 6643210 111113456678999999887655
No 348
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.97 E-value=0.0083 Score=47.66 Aligned_cols=96 Identities=18% Similarity=0.111 Sum_probs=60.2
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC----cCCCCccE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS----SALKDYEV 196 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~----~~l~~fD~ 196 (318)
..++|+.+|+|.+|........+ .|..|+.+|.+++..+..++ . . .+.++.+|..+.. .....+|+
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~--~g~~v~~~d~~~~~~~~~~~---~-~----~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSE--KGHDIVLIDIDKDICKKASA---E-I----DALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHH---H-C----SSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHH---h-c----CcEEEEcCCCCHHHHHHcCcccCCE
Confidence 35799999999877665433333 48899999999976654432 2 1 2456778775421 12457999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|++.. +.......+..+.+.+.++ .++++.
T Consensus 73 vi~~~----~~~~~~~~~~~~~~~~~~~-~ii~~~ 102 (140)
T 1lss_A 73 YIAVT----GKEEVNLMSSLLAKSYGIN-KTIARI 102 (140)
T ss_dssp EEECC----SCHHHHHHHHHHHHHTTCC-CEEEEC
T ss_pred EEEee----CCchHHHHHHHHHHHcCCC-EEEEEe
Confidence 98774 2223344566677788886 455544
No 349
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.95 E-value=0.0041 Score=50.34 Aligned_cols=96 Identities=13% Similarity=0.004 Sum_probs=63.5
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC----cCCCCccEE
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS----SALKDYEVV 197 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~----~~l~~fD~V 197 (318)
.++|+.+|+|.+|........+ .|..|+++|.|++.++.+++ ..+.++.+|+.+.. ....++|+|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~--~g~~V~~id~~~~~~~~~~~---------~~~~~~~gd~~~~~~l~~~~~~~~d~v 74 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA--AGKKVLAVDKSKEKIELLED---------EGFDAVIADPTDESFYRSLDLEGVSAV 74 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHH---------TTCEEEECCTTCHHHHHHSCCTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCeEEEEECCHHHHHHHHH---------CCCcEEECCCCCHHHHHhCCcccCCEE
Confidence 4689999999877665444333 48999999999988776543 12578889987631 123478988
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
++..- +. +....+...++.+. ...++.+..+
T Consensus 75 i~~~~---~~-~~n~~~~~~a~~~~-~~~iia~~~~ 105 (141)
T 3llv_A 75 LITGS---DD-EFNLKILKALRSVS-DVYAIVRVSS 105 (141)
T ss_dssp EECCS---CH-HHHHHHHHHHHHHC-CCCEEEEESC
T ss_pred EEecC---CH-HHHHHHHHHHHHhC-CceEEEEEcC
Confidence 86541 22 33344555666777 6677776643
No 350
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.95 E-value=0.0098 Score=57.69 Aligned_cols=106 Identities=8% Similarity=-0.087 Sum_probs=69.4
Q ss_pred CCEEEEEccCCChHHHHHHHH-------h--------CCCCcEEEEEeCC-----------hHHHHHHHHHhhcCCCCCC
Q 021008 122 PTKIAFIGSGPLPLTSIVLAI-------N--------HLTTTCFDNYDID-----------PSANSKALSLVSSDPDLST 175 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~-------~--------~~~ga~V~gvDid-----------~~ai~~Ar~~~~~~~gl~~ 175 (318)
+-+|+|+|||.+|.|.+.+.. + ..|..+|..-|+- |...+..++ . .|...
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~-~g~~~ 128 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---E-NGRKI 128 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---H-TCCCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---h-ccCCC
Confidence 679999999988888765554 0 1367889999987 544443322 2 23223
Q ss_pred CeEEEEccccc---cCcCCCCccEEEeccccCC-Chh-------------------------------------HHHHHH
Q 021008 176 RMFFHTTDIMN---VSSALKDYEVVFLAALVGM-DKD-------------------------------------EKIRVI 214 (318)
Q Consensus 176 ri~f~~gDa~~---l~~~l~~fD~V~~aalvgm-~~~-------------------------------------~k~~vl 214 (318)
+-.|+.|.... -.+..++||+||..+-++| ... +...+|
T Consensus 129 ~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL 208 (384)
T 2efj_A 129 GSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFL 208 (384)
T ss_dssp TSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45788887765 3455679999996554433 211 112347
Q ss_pred HHHHHhccCCeEEEEEc
Q 021008 215 DHLAKYMAPGALLMLRS 231 (318)
Q Consensus 215 ~~l~r~LkpGg~lv~r~ 231 (318)
+..++.|+|||++++-.
T Consensus 209 ~~Ra~eL~pGG~mvl~~ 225 (384)
T 2efj_A 209 RIHSEELISRGRMLLTF 225 (384)
T ss_dssp HHHHHHEEEEEEEEEEE
T ss_pred HHHHHHhccCCeEEEEE
Confidence 77899999999998865
No 351
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=96.95 E-value=0.0023 Score=59.24 Aligned_cols=91 Identities=12% Similarity=0.126 Sum_probs=63.7
Q ss_pred EEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc-CCCCccEEEecc
Q 021008 124 KIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS-ALKDYEVVFLAA 201 (318)
Q Consensus 124 rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~-~l~~fD~V~~aa 201 (318)
+||.+|+ |++|..++.+|+. .|++|+++|.+++..+.++++ |. ...+-..+...+.. ..+.+|+||-..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~--~Ga~Vi~~~~~~~~~~~~~~l-----Ga--~~vi~~~~~~~~~~~~~~~~d~v~d~~ 219 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHK--LGYQVAAVSGRESTHGYLKSL-----GA--NRILSRDEFAESRPLEKQLWAGAIDTV 219 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHH--TTCCEEEEESCGGGHHHHHHH-----TC--SEEEEGGGSSCCCSSCCCCEEEEEESS
T ss_pred eEEEECCCcHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhc-----CC--CEEEecCCHHHHHhhcCCCccEEEECC
Confidence 4999997 9999999999986 499999999999999888764 21 11121111111110 113799887443
Q ss_pred ccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 202 LVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 202 lvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
| . ..++...+.|+|||+++.-.
T Consensus 220 --g----~--~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 220 --G----D--KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp --C----H--HHHHHHHHTEEEEEEEEECC
T ss_pred --C----c--HHHHHHHHHHhcCCEEEEEe
Confidence 2 1 27888889999999998765
No 352
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.94 E-value=0.0032 Score=60.92 Aligned_cols=111 Identities=11% Similarity=-0.013 Sum_probs=68.1
Q ss_pred CCCEEEEEccCCChHHHHHHH-------HhC------CCCcEEEEEeCCh-HHHHHHHHHhhcC---------CCCCCCe
Q 021008 121 FPTKIAFIGSGPLPLTSIVLA-------INH------LTTTCFDNYDIDP-SANSKALSLVSSD---------PDLSTRM 177 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA-------~~~------~~ga~V~gvDid~-~ai~~Ar~~~~~~---------~gl~~ri 177 (318)
.+.+|+|+|||.+|.|...+. +++ .|..+|.--|+-. +.+.+-+.+.... .+.+.+-
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 368999999998888765421 111 2678888888654 3334444433210 0111133
Q ss_pred EEEEccccc---cCcCCCCccEEEecccc-CCCh------------------------------------hHHHHHHHHH
Q 021008 178 FFHTTDIMN---VSSALKDYEVVFLAALV-GMDK------------------------------------DEKIRVIDHL 217 (318)
Q Consensus 178 ~f~~gDa~~---l~~~l~~fD~V~~aalv-gm~~------------------------------------~~k~~vl~~l 217 (318)
.|+.|.... -.+..++||+|+...-+ ++.+ .+...+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 466665543 23456799999965434 3331 1556689999
Q ss_pred HHhccCCeEEEEEc
Q 021008 218 AKYMAPGALLMLRS 231 (318)
Q Consensus 218 ~r~LkpGg~lv~r~ 231 (318)
++.|+|||++++-.
T Consensus 212 a~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 212 AAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEE
Confidence 99999999998855
No 353
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.92 E-value=0.00055 Score=65.10 Aligned_cols=97 Identities=10% Similarity=0.022 Sum_probs=62.9
Q ss_pred cCCCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc--cccccCcCCCCcc
Q 021008 119 SRFPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT--DIMNVSSALKDYE 195 (318)
Q Consensus 119 ~~~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g--Da~~l~~~l~~fD 195 (318)
..++++||.+| +|++|..++.+|+. .|++|++++ +++..+.+++ .|. ...+-.. |..+.......+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~--~Ga~Vi~~~-~~~~~~~~~~-----lGa--~~v~~~~~~~~~~~~~~~~g~D 250 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKA--WDAHVTAVC-SQDASELVRK-----LGA--DDVIDYKSGSVEEQLKSLKPFD 250 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEE-CGGGHHHHHH-----TTC--SEEEETTSSCHHHHHHTSCCBS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHh--CCCEEEEEe-ChHHHHHHHH-----cCC--CEEEECCchHHHHHHhhcCCCC
Confidence 35789999999 79999999999986 489999999 7766666643 332 1112111 1111001224799
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+||-.+ |- ....+....+.+++||+++.-.
T Consensus 251 ~vid~~--g~----~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 251 FILDNV--GG----STETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEEESS--CT----THHHHGGGGBCSSSCCEEEESC
T ss_pred EEEECC--CC----hhhhhHHHHHhhcCCcEEEEeC
Confidence 998554 21 1123456678899999998754
No 354
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.00096 Score=62.64 Aligned_cols=94 Identities=14% Similarity=0.067 Sum_probs=65.8
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccc---ccC---cC-
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIM---NVS---SA- 190 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~---~l~---~~- 190 (318)
..++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.++++ |. ...+ |.. ++. ..
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~--~Ga~V~~~~~~~~~~~~~~~~-----g~--~~~~---d~~~~~~~~~~~~~~ 234 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKA--MGYRVLGIDGGEGKEELFRSI-----GG--EVFI---DFTKEKDIVGAVLKA 234 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEEECSTTHHHHHHHT-----TC--CEEE---ETTTCSCHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHH--CCCcEEEEcCCHHHHHHHHHc-----CC--ceEE---ecCccHhHHHHHHHH
Confidence 468899999998 7789998888886 489999999999888777652 32 1111 222 110 00
Q ss_pred -CCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 191 -LKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 191 -l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+.+|+|+..+-. ...++...+.|++||+++.-.
T Consensus 235 ~~~~~D~vi~~~g~-------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 235 TDGGAHGVINVSVS-------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HTSCEEEEEECSSC-------HHHHHHHTTSEEEEEEEEECC
T ss_pred hCCCCCEEEECCCc-------HHHHHHHHHHHhcCCEEEEEe
Confidence 0169999866521 246778889999999998765
No 355
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.89 E-value=0.0044 Score=57.12 Aligned_cols=98 Identities=16% Similarity=0.157 Sum_probs=65.7
Q ss_pred CCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhh-------cCCCC-C-------------CCeEE
Q 021008 122 PTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVS-------SDPDL-S-------------TRMFF 179 (318)
Q Consensus 122 ~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~-------~~~gl-~-------------~ri~f 179 (318)
-++|.+||+|.+|.+. ..+++ .|..|+.+|++++.++.+++.+. + .|. . .++++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~---~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~-~g~~~~~~~~~~~~~~~~~~i~~ 90 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAA---TGHTVVLVDQTEDILAKSKKGIEESLRKVAK-KKFAENPKAGDEFVEKTLSTIAT 90 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHHHHHHH-TTSSSCHHHHHHHHHHHHHTEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHH-cCCCCccccchhhHHHHHhceEE
Confidence 3689999999887743 44554 38899999999999888754321 1 121 1 14554
Q ss_pred EEccccccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 180 HTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 180 ~~gDa~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
. .|..+ .....|+|+++.-- +...|..+++++.+.++||.+|+.
T Consensus 91 ~-~~~~~---~~~~aD~Vi~avp~--~~~~~~~v~~~l~~~~~~~~iv~s 134 (302)
T 1f0y_A 91 S-TDAAS---VVHSTDLVVEAIVE--NLKVKNELFKRLDKFAAEHTIFAS 134 (302)
T ss_dssp E-SCHHH---HTTSCSEEEECCCS--CHHHHHHHHHHHTTTSCTTCEEEE
T ss_pred e-cCHHH---hhcCCCEEEEcCcC--cHHHHHHHHHHHHhhCCCCeEEEE
Confidence 2 33321 23478999987521 334578899999999999887654
No 356
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.87 E-value=0.0011 Score=62.15 Aligned_cols=95 Identities=13% Similarity=0.075 Sum_probs=66.2
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc--ccc-cC--cCCC
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD--IMN-VS--SALK 192 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD--a~~-l~--~~l~ 192 (318)
..++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.++++-.. . ++..+ ..+ +. ..-.
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~ga~-------~-v~~~~~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKG--MGAKVIAVVNRTAATEFVKSVGAD-------I-VLPLEEGWAKAVREATGGA 226 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHTCS-------E-EEESSTTHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhcCCc-------E-EecCchhHHHHHHHHhCCC
Confidence 468899999997 9999999999986 499999999999998888764221 1 11111 111 10 1112
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+||-.+-. ..++...+.|+|||++++-.
T Consensus 227 g~Dvvid~~g~--------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 227 GVDMVVDPIGG--------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp CEEEEEESCC----------CHHHHHHTEEEEEEEEEC-
T ss_pred CceEEEECCch--------hHHHHHHHhhcCCCEEEEEE
Confidence 69999865421 15677789999999998765
No 357
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=96.87 E-value=0.002 Score=60.31 Aligned_cols=96 Identities=14% Similarity=0.034 Sum_probs=66.1
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc--cccc-cC--cCCC
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT--DIMN-VS--SALK 192 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g--Da~~-l~--~~l~ 192 (318)
..++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.++++ |. + ..+-.. |..+ +. ..-.
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~--~G~~Vi~~~~~~~~~~~~~~~-----ga-~-~~~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKL--FGARVIATAGSEDKLRRAKAL-----GA-D-ETVNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHH-----TC-S-EEEETTSTTHHHHHHHHTTTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHhc-----CC-C-EEEcCCcccHHHHHHHHhCCC
Confidence 367899999999 8899999999986 489999999999988888653 21 1 111111 1100 10 1113
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+|+-.+- + ..++...+.|++||+++.-.
T Consensus 235 ~~d~vi~~~g-~-------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 235 GADKVVDHTG-A-------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp CEEEEEESSC-S-------SSHHHHHHHEEEEEEEEESS
T ss_pred CceEEEECCC-H-------HHHHHHHHhhccCCEEEEEe
Confidence 7999986652 1 24666778999999998765
No 358
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.86 E-value=0.00047 Score=66.40 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=64.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCC--CCCC------------CeE--EEEcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDP--DLST------------RMF--FHTTD 183 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~--gl~~------------ri~--f~~gD 183 (318)
.++++|+.+|+|+.|..++.+|+.+ |++|+.+|++++..+.++++-.... ...+ .+. +...+
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~ 247 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 247 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence 3789999999999999999999864 8999999999987777655211100 0000 000 00000
Q ss_pred ccccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 184 IMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 184 a~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+......+|+|+...+++....+ .-+.++..+.||||++++--.
T Consensus 248 ~~~l~~~~~~aDvVi~~~~~pg~~~~-~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 248 AEAVLKELVKTDIAITTALIPGKPAP-VLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp HHHHHHHHTTCSEEEECCCCTTSCCC-CCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHHHHhCCCCEEEECCccCCCCCC-eeeCHHHHhcCCCCCEEEEEe
Confidence 00021122478999977755221111 112255668899999876544
No 359
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.84 E-value=0.0034 Score=61.35 Aligned_cols=98 Identities=10% Similarity=0.070 Sum_probs=67.4
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccc-------------
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDI------------- 184 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa------------- 184 (318)
..++++||.+|+ |++|+.++.+|+. .|++|++++.+++..+.++++-.. .-+.....|.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~--~Ga~vi~~~~~~~~~~~~~~lGa~-----~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALA--GGANPICVVSSPQKAEICRAMGAE-----AIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHTCC-----EEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHH--cCCeEEEEECCHHHHHHHHhhCCc-----EEEecCcCcccccccccccchHH
Confidence 478899999998 9999999999986 499999999999998888764221 1111101110
Q ss_pred -----cccC--cCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 185 -----MNVS--SALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 185 -----~~l~--~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..+. ..-..+|+||-.. | . ..+....+.|+|||+++.-.
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvid~~--G----~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVFEHP--G----R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEECS--C----H--HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEcC--C----c--hhHHHHHHHhhCCcEEEEEe
Confidence 0110 1113799998554 2 1 46777889999999998754
No 360
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=96.83 E-value=0.0039 Score=62.11 Aligned_cols=100 Identities=27% Similarity=0.272 Sum_probs=69.5
Q ss_pred CCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc----C--CCC-C--------CCeEEEEcccc
Q 021008 122 PTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSS----D--PDL-S--------TRMFFHTTDIM 185 (318)
Q Consensus 122 ~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~----~--~gl-~--------~ri~f~~gDa~ 185 (318)
-++|.+||+|.+|.+- ..+++ .|..|+.+|+|++.++.+++.+.+ . .|. . .++++. .|..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~---aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~ 80 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAAS---HGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDIH 80 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCGG
T ss_pred CCEEEEECcCHHHHHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCHH
Confidence 4689999999887763 44554 488999999999999998764211 0 111 1 145543 2322
Q ss_pred ccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 186 NVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 186 ~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.....|+|+.+... +..-|..+++++.+.++||.+|+...
T Consensus 81 ----~~~~aDlVIeAVpe--~~~vk~~v~~~l~~~~~~~~Ilasnt 120 (483)
T 3mog_A 81 ----ALAAADLVIEAASE--RLEVKKALFAQLAEVCPPQTLLTTNT 120 (483)
T ss_dssp ----GGGGCSEEEECCCC--CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ----HhcCCCEEEEcCCC--cHHHHHHHHHHHHHhhccCcEEEecC
Confidence 33478999977532 45678899999999999999886643
No 361
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.83 E-value=0.0014 Score=61.31 Aligned_cols=95 Identities=8% Similarity=-0.022 Sum_probs=64.4
Q ss_pred cCCCCEEEEEccC-CChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc--ccc----ccCcCC
Q 021008 119 SRFPTKIAFIGSG-PLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT--DIM----NVSSAL 191 (318)
Q Consensus 119 ~~~~~rVL~IGsG-plp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g--Da~----~l~~~l 191 (318)
..++++||.+|+| ++|..++.+|+.. |++|+++|.+++..+.++++-.. ..+-.. |.. ++. .-
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lga~-------~~~~~~~~~~~~~~~~~~-~~ 211 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLRLGAA-------YVIDTSTAPLYETVMELT-NG 211 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHTCS-------EEEETTTSCHHHHHHHHT-TT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhCCCc-------EEEeCCcccHHHHHHHHh-CC
Confidence 4788999999987 7899999999864 99999999999998888764221 111111 111 111 11
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..+|+|+-.+- .. ...+..+.|+|||+++.-.
T Consensus 212 ~g~Dvvid~~g----~~----~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 212 IGADAAIDSIG----GP----DGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp SCEEEEEESSC----HH----HHHHHHHTEEEEEEEEECC
T ss_pred CCCcEEEECCC----Ch----hHHHHHHHhcCCCEEEEEe
Confidence 37999986542 11 1233448999999998865
No 362
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.81 E-value=0.00096 Score=62.70 Aligned_cols=95 Identities=12% Similarity=0.071 Sum_probs=65.7
Q ss_pred cCCCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc-cC--cCCCCc
Q 021008 119 SRFPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN-VS--SALKDY 194 (318)
Q Consensus 119 ~~~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~-l~--~~l~~f 194 (318)
..++++||.+| +|++|..++.+|+. .|++|+++ .+++..+.++++ |... +. ...|..+ +. ..-..+
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~--~Ga~Vi~~-~~~~~~~~~~~l-----Ga~~-i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALA--RGARVFAT-ARGSDLEYVRDL-----GATP-ID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEE-ECHHHHHHHHHH-----TSEE-EE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHH--CCCEEEEE-eCHHHHHHHHHc-----CCCE-ec-cCCCHHHHHHHHhcCCCc
Confidence 47889999999 79999999999986 49999999 898888877664 2211 22 1111111 00 111379
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+||-.+ | . ..+....+.|+|||+++.-.
T Consensus 218 D~vid~~--g---~---~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 218 DLVYDTL--G---G---PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEESS--C---T---HHHHHHHHHEEEEEEEEESC
T ss_pred eEEEECC--C---c---HHHHHHHHHHhcCCeEEEEc
Confidence 9998554 2 1 36777789999999998754
No 363
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.81 E-value=0.0018 Score=61.22 Aligned_cols=115 Identities=12% Similarity=0.081 Sum_probs=71.2
Q ss_pred CCCCEEEEEccCCChHHHHHH---HHhCCCCcEE--EEEeCCh---------HHHHHHHHHhhcCCCC-CCC--eEEEEc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVL---AINHLTTTCF--DNYDIDP---------SANSKALSLVSSDPDL-STR--MFFHTT 182 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~L---A~~~~~ga~V--~gvDid~---------~ai~~Ar~~~~~~~gl-~~r--i~f~~g 182 (318)
.+.-+||++|-| .|+-.+.. +.+..|..++ +.+|-++ ..-+..+.+....... +.+ .++..|
T Consensus 95 ~~~~~IlE~GFG-TGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~G 173 (308)
T 3vyw_A 95 RKVIRILDVGFG-LGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLG 173 (308)
T ss_dssp CSEEEEEEECCT-TSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEES
T ss_pred CCCcEEEEeCCC-ccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEec
Confidence 344689999999 68865432 2222356554 5555432 1223333333321111 233 467889
Q ss_pred cccccCcCCC--CccEEEeccccCC-ChhHH-HHHHHHHHHhccCCeEEEEEcCCCc
Q 021008 183 DIMNVSSALK--DYEVVFLAALVGM-DKDEK-IRVIDHLAKYMAPGALLMLRSAHGA 235 (318)
Q Consensus 183 Da~~l~~~l~--~fD~V~~aalvgm-~~~~k-~~vl~~l~r~LkpGg~lv~r~~~g~ 235 (318)
|+.+....+. .||++|++++-+- +++-+ .++++.+++.++|||+++.-++.|.
T Consensus 174 Da~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaag~ 230 (308)
T 3vyw_A 174 DARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSSLS 230 (308)
T ss_dssp CHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCCHH
T ss_pred hHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCcHH
Confidence 9987544443 6999999997632 22222 5899999999999999998776664
No 364
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.81 E-value=0.0003 Score=68.44 Aligned_cols=99 Identities=19% Similarity=0.292 Sum_probs=64.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccc--------------
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIM-------------- 185 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~-------------- 185 (318)
.++++|+.||+|++|..++.+|+.+ |++|+.+|++++..+.++++ |. +++..|..
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~v~D~~~~~~~~~~~l-----Ga----~~~~~~~~~~~~~~~g~~~~~~ 238 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQSM-----GA----EFLELDFKEEAGSGDGYAKVMS 238 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCGGGHHHHHHT-----TC----EECCC--------CCHHHHHHS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHc-----CC----EEEEecccccccccccchhhcc
Confidence 4689999999999999999999874 89999999999887776443 21 12111100
Q ss_pred ---------ccCcCCCCccEEEecccc-CCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 186 ---------NVSSALKDYEVVFLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 186 ---------~l~~~l~~fD~V~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
++......+|+|+...++ +.. .. .-+-++..+.|+||++++--.
T Consensus 239 ~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~~-ap-~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 239 DAFIKAEMELFAAQAKEVDIIVTTALIPGKP-AP-KLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHHHHHHHCSEEEECCCCTTSC-CC-CCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCccCCCC-CC-eeeCHHHHhcCCCCcEEEEEc
Confidence 121112368999987655 211 11 112245668899999886554
No 365
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=96.80 E-value=0.0021 Score=60.62 Aligned_cols=95 Identities=8% Similarity=-0.043 Sum_probs=66.4
Q ss_pred cCCCCEEEEE-ccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc-----CCC
Q 021008 119 SRFPTKIAFI-GSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS-----ALK 192 (318)
Q Consensus 119 ~~~~~rVL~I-GsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~-----~l~ 192 (318)
..++++||.+ |+|++|..++.+|+. .|++|+++|.+++..+.++++-.. ..+ ..+-.++.. ...
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~lGa~-------~~~-~~~~~~~~~~~~~~~~~ 234 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARA--FGAEVYATAGSTGKCEACERLGAK-------RGI-NYRSEDFAAVIKAETGQ 234 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHTCS-------EEE-ETTTSCHHHHHHHHHSS
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhcCCC-------EEE-eCCchHHHHHHHHHhCC
Confidence 4688999999 689999999999986 499999999999999888764221 111 111111100 023
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+|+-.+- . ..+....+.|+|||+++.-.
T Consensus 235 g~Dvvid~~g-----~---~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 235 GVDIILDMIG-----A---AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp CEEEEEESCC-----G---GGHHHHHHTEEEEEEEEECC
T ss_pred CceEEEECCC-----H---HHHHHHHHHhccCCEEEEEE
Confidence 7999986542 1 15666788999999998765
No 366
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.79 E-value=0.0077 Score=49.63 Aligned_cols=100 Identities=12% Similarity=0.079 Sum_probs=66.6
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCCh-HHHHHHHHHhhcCCCCCCCeEEEEccccccC----cCCCCccE
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDP-SANSKALSLVSSDPDLSTRMFFHTTDIMNVS----SALKDYEV 196 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~-~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~----~~l~~fD~ 196 (318)
.++|+.+|+|..|......... .|..|+.+|.++ +..+....... ..+.++.||+.+.. ......|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~--~g~~V~vid~~~~~~~~~~~~~~~------~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ--RGQNVTVISNLPEDDIKQLEQRLG------DNADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--TTCCEEEEECCCHHHHHHHHHHHC------TTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CCcEEEECCCHHHHHHHHHHHH--CCCCEEEEECCChHHHHHHHHhhc------CCCeEEEcCCCCHHHHHHcChhhCCE
Confidence 4689999999777654433333 488999999984 54433332221 34788999987631 13568898
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
|++.. +.......+...++.+.|...++.+-.+
T Consensus 75 vi~~~----~~d~~n~~~~~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 75 ILALS----DNDADNAFVVLSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp EEECS----SCHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred EEEec----CChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 88664 2234556667778888888888887643
No 367
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=96.77 E-value=0.0019 Score=60.55 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=67.0
Q ss_pred cCCCCEEEEEccC-CChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc------ccccCcCC
Q 021008 119 SRFPTKIAFIGSG-PLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD------IMNVSSAL 191 (318)
Q Consensus 119 ~~~~~rVL~IGsG-plp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD------a~~l~~~l 191 (318)
..++++||.+|+| ++|..++.+|+.. .|++|+++|.+++..+.++++ |. ...+-..| +.++.. .
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~-~Ga~Vi~~~~~~~~~~~~~~~-----g~--~~~~~~~~~~~~~~~~~~~~-~ 238 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAV-SGATIIGVDVREEAVEAAKRA-----GA--DYVINASMQDPLAEIRRITE-S 238 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHH-TCCEEEEEESSHHHHHHHHHH-----TC--SEEEETTTSCHHHHHHHHTT-T
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHh-----CC--CEEecCCCccHHHHHHHHhc-C
Confidence 4688999999998 7888888888752 389999999999988888654 21 11121111 111211 1
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+.+|+|+-.+-. ...++...+.|+|||+++.-.
T Consensus 239 ~~~d~vi~~~g~-------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 239 KGVDAVIDLNNS-------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp SCEEEEEESCCC-------HHHHTTGGGGEEEEEEEEECC
T ss_pred CCceEEEECCCC-------HHHHHHHHHHHhcCCEEEEEC
Confidence 379999865521 236777789999999998754
No 368
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.76 E-value=0.0042 Score=57.73 Aligned_cols=96 Identities=6% Similarity=-0.012 Sum_probs=65.3
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc----Cc-CCC
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV----SS-ALK 192 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l----~~-~l~ 192 (318)
..++++||..|+ |++|..++.+++. .|++|+++|.+++..+.++++ |. ...+-..|..++ .. ..+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~--~G~~V~~~~~~~~~~~~~~~~-----g~--~~~~d~~~~~~~~~~~~~~~~~ 213 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKL--KGCKVVGAAGSDEKIAYLKQI-----GF--DAAFNYKTVNSLEEALKKASPD 213 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHT-----TC--SEEEETTSCSCHHHHHHHHCTT
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHhc-----CC--cEEEecCCHHHHHHHHHHHhCC
Confidence 467899999997 8899999888886 499999999999888777443 22 112211110111 00 013
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+|+..+- . ..++...+.|+|||++++-.
T Consensus 214 ~~d~vi~~~g------~--~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 214 GYDCYFDNVG------G--EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp CEEEEEESSC------H--HHHHHHHTTEEEEEEEEECC
T ss_pred CCeEEEECCC------h--HHHHHHHHHHhcCCEEEEEe
Confidence 6999986652 1 24777889999999998754
No 369
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.74 E-value=0.0075 Score=54.62 Aligned_cols=90 Identities=18% Similarity=0.149 Sum_probs=60.4
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCc--EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCC-CccEEEe
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTT--CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALK-DYEVVFL 199 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga--~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~-~fD~V~~ 199 (318)
++|.+||+|.+|.+......+ .|. +|+++|.+++..+.+++ .|... .+ ..|..+ ... ..|+|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~--~g~~~~V~~~d~~~~~~~~~~~-----~g~~~--~~-~~~~~~---~~~~~aDvVil 68 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR--SGFKGKIYGYDINPESISKAVD-----LGIID--EG-TTSIAK---VEDFSPDFVML 68 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH--TTCCSEEEEECSCHHHHHHHHH-----TTSCS--EE-ESCGGG---GGGTCCSEEEE
T ss_pred cEEEEEecCHHHHHHHHHHHh--cCCCcEEEEEeCCHHHHHHHHH-----CCCcc--cc-cCCHHH---HhcCCCCEEEE
Confidence 489999999888775443333 255 89999999988776653 33321 11 223322 234 6899998
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
+. +...-..++.++.+.++||.+++.
T Consensus 69 av----p~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 69 SS----PVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp CS----CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred cC----CHHHHHHHHHHHHhhCCCCcEEEE
Confidence 75 344556788889889999987664
No 370
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.73 E-value=0.0023 Score=59.69 Aligned_cols=97 Identities=8% Similarity=0.011 Sum_probs=65.9
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC---c--CCC
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS---S--ALK 192 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~---~--~l~ 192 (318)
..++++||.+|+ |++|..++.+|+. .|++|+++|.+++..+.+++ + .|. ...+-..+..++. . ..+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~--~G~~V~~~~~~~~~~~~~~~---~-~g~--~~~~d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKM--MGCYVVGSAGSKEKVDLLKT---K-FGF--DDAFNYKEESDLTAALKRCFPN 224 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHH---T-SCC--SEEEETTSCSCSHHHHHHHCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH---H-cCC--ceEEecCCHHHHHHHHHHHhCC
Confidence 467899999996 8899999999986 48999999999988877752 2 232 1112111111110 0 013
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+|+-.+ | . ..++...+.|+|||++++-.
T Consensus 225 ~~d~vi~~~--g----~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 225 GIDIYFENV--G----G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp CEEEEEESS--C----H--HHHHHHHTTEEEEEEEEECC
T ss_pred CCcEEEECC--C----H--HHHHHHHHHHhcCCEEEEEc
Confidence 699998655 1 1 36778889999999998754
No 371
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=96.71 E-value=0.0013 Score=63.91 Aligned_cols=98 Identities=13% Similarity=0.040 Sum_probs=67.1
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccc-------------
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDI------------- 184 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa------------- 184 (318)
..++++||.+|+ |++|..++.+|+. .|++|++++.+++..+.++++ |...-+.....|.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~--~Ga~vi~~~~~~~~~~~~~~l-----Ga~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKN--GGGIPVAVVSSAQKEAAVRAL-----GCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHT-----TCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhc-----CCCEEEecccccccccccccccccch
Confidence 478899999997 9999999999986 499999999999988887653 3322111111111
Q ss_pred ------cccCc-CCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 185 ------MNVSS-ALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 185 ------~~l~~-~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
..+.. .-..+|+||-.+ | . ..++...+.|++||+++.-.
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~--G----~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHT--G----R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECS--C----H--HHHHHHHHHSCTTCEEEESC
T ss_pred hhhHHHHHHHHHhCCCceEEEECC--C----c--hHHHHHHHHHhcCCEEEEEe
Confidence 00000 013699998654 2 1 25677788999999998754
No 372
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.70 E-value=0.0018 Score=61.32 Aligned_cols=92 Identities=12% Similarity=0.113 Sum_probs=63.4
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCCh---HHHHHHHHHhhcCCCCCCCeEEEEcc-ccc-cCcCCCCccE
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDP---SANSKALSLVSSDPDLSTRMFFHTTD-IMN-VSSALKDYEV 196 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~---~ai~~Ar~~~~~~~gl~~ri~f~~gD-a~~-l~~~l~~fD~ 196 (318)
+++||.+|+|++|..++.+|+.. |++|+++|.++ +..+.++++ |. ..+..+ ..+ +......+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~~-----ga----~~v~~~~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEET-----KT----NYYNSSNGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHHH-----TC----EEEECTTCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHHh-----CC----ceechHHHHHHHHHhCCCCCE
Confidence 89999999999999999999864 89999999998 777777654 22 111111 111 1000046999
Q ss_pred EEeccccCCChhHHHHHH-HHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVI-DHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl-~~l~r~LkpGg~lv~r~ 231 (318)
|+-.+-. . ..+ +...+.|+|||+++.-.
T Consensus 250 vid~~g~--~-----~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 250 IIDATGA--D-----VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEECCCC--C-----THHHHHHGGGEEEEEEEEECS
T ss_pred EEECCCC--h-----HHHHHHHHHHHhcCCEEEEEe
Confidence 9865421 1 134 77789999999988765
No 373
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=96.69 E-value=0.0012 Score=61.25 Aligned_cols=97 Identities=7% Similarity=0.064 Sum_probs=62.8
Q ss_pred CCCC-EEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc-CCCCccE
Q 021008 120 RFPT-KIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS-ALKDYEV 196 (318)
Q Consensus 120 ~~~~-rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~-~l~~fD~ 196 (318)
.+++ +||.+|+ |++|..++.+|+.. |++|++++.+++..+.++++ |...-+.....|...+.. ....+|+
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~l-----Ga~~~i~~~~~~~~~~~~~~~~~~d~ 219 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRVL-----GAKEVLAREDVMAERIRPLDKQRWAA 219 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHT-----TCSEEEECC---------CCSCCEEE
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHc-----CCcEEEecCCcHHHHHHHhcCCcccE
Confidence 4554 8999997 99999999999864 89999999999888887653 321111111111000100 1136999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
||-.. | . ..++...+.+++||+++.-.
T Consensus 220 vid~~--g----~--~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 220 AVDPV--G----G--RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEECS--T----T--TTHHHHHHTEEEEEEEEECS
T ss_pred EEECC--c----H--HHHHHHHHhhccCCEEEEEe
Confidence 88554 2 1 14667778999999998754
No 374
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.68 E-value=0.012 Score=53.84 Aligned_cols=104 Identities=9% Similarity=0.086 Sum_probs=69.2
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc-cccccCcCCCCccE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT-DIMNVSSALKDYEV 196 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g-Da~~l~~~l~~fD~ 196 (318)
..++.+|+|+||+|+|.|-.+.. . .|+ .|.|+|+-+.--+. -.+++. .|. .-++|..+ |+..++. ..||.
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~-~--~g~~~V~avdvG~~ghe~-P~~~~s-~gw-n~v~fk~gvDv~~~~~--~~~Dt 147 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAG-L--KKVTEVRGYTKGGPGHEE-PVPMST-YGW-NIVKLMSGKDVFYLPP--EKCDT 147 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHT-S--TTEEEEEEECCCSTTSCC-CCCCCC-TTT-TSEEEECSCCGGGCCC--CCCSE
T ss_pred CCCCCEEEEcCCCCCcHHHHHHH-h--cCCCEEEEEecCCCCccC-cchhhh-cCc-CceEEEeccceeecCC--ccccE
Confidence 47888999999999999965443 2 354 69999997632210 012233 444 67999999 9887754 47999
Q ss_pred EEecccc--CCChhHH---HHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALV--GMDKDEK---IRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalv--gm~~~~k---~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+.+--- +-+.-+. .++|+-+.+.|++ |-+++--
T Consensus 148 llcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 148 LLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEE
T ss_pred EEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEE
Confidence 9976422 2112233 3477777888998 6776654
No 375
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.67 E-value=0.0057 Score=59.66 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=70.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC----cCCCCccE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS----SALKDYEV 196 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~----~~l~~fD~ 196 (318)
...+|+.+|+|.+|.......+. .|..|+.||.|++.++.+++ .| +.++.||+.+.. ......|+
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~--~g~~vvvId~d~~~v~~~~~-----~g----~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLS--SGVKMVVLDHDPDHIETLRK-----FG----MKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH--TTCCEEEEECCHHHHHHHHH-----TT----CCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHh-----CC----CeEEEcCCCCHHHHHhcCCCccCE
Confidence 45789999999888776555544 48999999999999888763 22 457889998731 23457898
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+++. +.......+...++.+.|...+++|.
T Consensus 72 viv~~----~~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 72 LINAI----DDPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp EEECC----SSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEECC----CChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 88654 33455566677788999999998876
No 376
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=96.66 E-value=0.0034 Score=58.47 Aligned_cols=96 Identities=9% Similarity=0.035 Sum_probs=65.7
Q ss_pred cCCCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc--ccc-cC--cCCC
Q 021008 119 SRFPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD--IMN-VS--SALK 192 (318)
Q Consensus 119 ~~~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD--a~~-l~--~~l~ 192 (318)
..++++||.+| +|++|..++.+|+. .|++|+++|.+++..+.++++ |. ...+-..+ ..+ +. ..-.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~--~G~~Vi~~~~~~~~~~~~~~~-----g~--~~~~d~~~~~~~~~i~~~~~~~ 213 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARH--LGATVIGTVSTEEKAETARKL-----GC--HHTINYSTQDFAEVVREITGGK 213 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHH-----TC--SEEEETTTSCHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHc-----CC--CEEEECCCHHHHHHHHHHhCCC
Confidence 36789999999 59999999999986 489999999999888887653 21 11111111 000 10 0113
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+|+-.+- . ..++...+.|+|||+++.-.
T Consensus 214 ~~d~vi~~~g------~--~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 214 GVDVVYDSIG------K--DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CEEEEEECSC------T--TTHHHHHHTEEEEEEEEECC
T ss_pred CCeEEEECCc------H--HHHHHHHHhhccCCEEEEEe
Confidence 6999986552 1 35677789999999988765
No 377
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.65 E-value=0.0057 Score=58.86 Aligned_cols=111 Identities=9% Similarity=0.010 Sum_probs=72.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHH-------h-------CCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAI-------N-------HLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIM 185 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~-------~-------~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~ 185 (318)
+.+-+|+|+||+.+|-|.+.+.. + -.|..+|..-|.-..--...-+.... .....+-.|+.|...
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~-~~~~~~~~f~~gvpg 128 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPI-ENDVDGVCFINGVPG 128 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTT-SCSCTTCEEEEEEES
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcch-hcccCCCEEEEecch
Confidence 34578999999987777543332 0 24678899999876554443333322 111124578888766
Q ss_pred c---cCcCCCCccEEEecccc-CCCh-------------------------------hHHHHHHHHHHHhccCCeEEEEE
Q 021008 186 N---VSSALKDYEVVFLAALV-GMDK-------------------------------DEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 186 ~---l~~~l~~fD~V~~aalv-gm~~-------------------------------~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
. -.+..+++|+||..+-+ ++.+ .+...+|+..++.|+|||++++-
T Consensus 129 SFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 129 SFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp CSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 5 44566799999965433 3321 24456799999999999999885
Q ss_pred c
Q 021008 231 S 231 (318)
Q Consensus 231 ~ 231 (318)
.
T Consensus 209 ~ 209 (359)
T 1m6e_X 209 I 209 (359)
T ss_dssp E
T ss_pred E
Confidence 5
No 378
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.65 E-value=0.0016 Score=65.21 Aligned_cols=90 Identities=17% Similarity=0.089 Sum_probs=62.6
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..++++|+.||+|++|......++.+ |++|+++|+++...+.|++ .|. ++ .+..++ +..+|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~-----~Ga----~~--~~l~e~---l~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMM-----EGF----DV--VTVEEA---IGDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH-----TTC----EE--CCHHHH---GGGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH-----cCC----EE--ecHHHH---HhCCCEEE
Confidence 36889999999999999988888864 8999999999987776653 233 11 122222 24789999
Q ss_pred eccccCCChhHHHHHHH-HHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVID-HLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~-~l~r~LkpGg~lv~r~ 231 (318)
.+.-. . .++. +..+.|||||+|+.-.
T Consensus 335 ~atgt--~-----~~i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 335 TATGN--K-----DIIMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp ECSSS--S-----CSBCHHHHHHSCTTCEEEECS
T ss_pred ECCCC--H-----HHHHHHHHHhcCCCcEEEEeC
Confidence 76421 1 1222 4567899999886543
No 379
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.64 E-value=0.01 Score=55.80 Aligned_cols=108 Identities=13% Similarity=0.122 Sum_probs=70.4
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEc-cccccCcCCCCccE
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTT-DIMNVSSALKDYEV 196 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~g-Da~~l~~~l~~fD~ 196 (318)
..++.+|+|+||+|+|.|-.+..+ .|+ .|.|+|+-..--+. =.++.+ +|. .-|.|..+ |+..++. ..+|.
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~---~gv~~V~avdvG~~~he~-P~~~~q-l~w-~lV~~~~~~Dv~~l~~--~~~D~ 163 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQ---KRVQEVRGYTKGGPGHEE-PQLVQS-YGW-NIVTMKSGVDVFYRPS--ECCDT 163 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTC---TTEEEEEEECCCSTTSCC-CCCCCB-TTG-GGEEEECSCCTTSSCC--CCCSE
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhh---cCCCEEEEEEcCCCCccC-cchhhh-cCC-cceEEEeccCHhhCCC--CCCCE
Confidence 467789999999999999654432 465 59999997641100 001122 333 33889998 9888865 46999
Q ss_pred EEecccc--CCChhHH---HHHHHHHHHhccCC-eEEEEEcCCC
Q 021008 197 VFLAALV--GMDKDEK---IRVIDHLAKYMAPG-ALLMLRSAHG 234 (318)
Q Consensus 197 V~~aalv--gm~~~~k---~~vl~~l~r~LkpG-g~lv~r~~~g 234 (318)
|+.+--- +-+.-+. .++|+-+.+.|++| |-+++---.|
T Consensus 164 ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 164 LLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred EEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 9866421 2112233 44777778899999 8888865444
No 380
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=96.63 E-value=0.01 Score=53.58 Aligned_cols=89 Identities=16% Similarity=0.172 Sum_probs=60.2
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEeccc
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAAL 202 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aal 202 (318)
++|.+||+|.+|.+......+ .|.+|+++|.+++..+.+++ .|... . ...|..++ ...|+|+++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~~~~~~~~~~-----~g~~~--~-~~~~~~~~----~~~D~vi~av- 65 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRR--RGHYLIGVSRQQSTCEKAVE-----RQLVD--E-AGQDLSLL----QTAKIIFLCT- 65 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHH-----TTSCS--E-EESCGGGG----TTCSEEEECS-
T ss_pred CEEEEEcCcHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHh-----CCCCc--c-ccCCHHHh----CCCCEEEEEC-
Confidence 379999999887664333222 37799999999987766542 23322 1 12333333 4789999876
Q ss_pred cCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 203 VGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 203 vgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
+......+++++.+.++||..++-
T Consensus 66 ---~~~~~~~~~~~l~~~~~~~~~vv~ 89 (279)
T 2f1k_A 66 ---PIQLILPTLEKLIPHLSPTAIVTD 89 (279)
T ss_dssp ---CHHHHHHHHHHHGGGSCTTCEEEE
T ss_pred ---CHHHHHHHHHHHHhhCCCCCEEEE
Confidence 445667888999889999887653
No 381
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.63 E-value=0.002 Score=59.75 Aligned_cols=96 Identities=10% Similarity=0.041 Sum_probs=65.8
Q ss_pred cCCCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc--cc-ccC--cCCC
Q 021008 119 SRFPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD--IM-NVS--SALK 192 (318)
Q Consensus 119 ~~~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD--a~-~l~--~~l~ 192 (318)
..++++||.+| +|++|..++.+|+.. |++|+++|.+++..+.++++ |. ...+-..| .. .+. ..-.
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~-----g~--~~~~~~~~~~~~~~~~~~~~~~ 208 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALKA-----GA--WQVINYREEDLVERLKEITGGK 208 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHH-----TC--SEEEETTTSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHc-----CC--CEEEECCCccHHHHHHHHhCCC
Confidence 36789999999 788999999998864 89999999999888887763 21 11111111 00 010 0112
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+|+..+- ...++...+.|++||+++.-.
T Consensus 209 ~~D~vi~~~g--------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 209 KVRVVYDSVG--------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp CEEEEEECSC--------GGGHHHHHHTEEEEEEEEECC
T ss_pred CceEEEECCc--------hHHHHHHHHHhcCCCEEEEEe
Confidence 6999986652 235677789999999988765
No 382
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.62 E-value=0.013 Score=58.13 Aligned_cols=100 Identities=12% Similarity=0.111 Sum_probs=66.6
Q ss_pred CCCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHH-HHHH----HHhhcCCCC--------CCCeEEEEccccc
Q 021008 121 FPTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSAN-SKAL----SLVSSDPDL--------STRMFFHTTDIMN 186 (318)
Q Consensus 121 ~~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai-~~Ar----~~~~~~~gl--------~~ri~f~~gDa~~ 186 (318)
+-++|.+||+|.+|.+- ..+|+ .|..|+.+|++++.. +..+ +++++ ..+ -.++++. .|.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~---aG~~V~l~D~~~e~a~~~i~~~l~~~~~~-G~l~~~~~~~~~~~i~~t-~dl-- 125 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGL---AGIETFLVVRNEQRCKQELEVMYAREKSF-KRLNDKRIEKINANLKIT-SDF-- 125 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHHHHT-TSCCHHHHHHHHTTEEEE-SCG--
T ss_pred cCCEEEEECCCHHHHHHHHHHHH---CCCeEEEEECcHHHHHHHHHHHHHHHHHc-CCCCHHHHHHHhcceEEe-CCH--
Confidence 34799999999887763 44554 489999999999821 1111 12222 111 1356653 332
Q ss_pred cCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 187 VSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 187 l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
......|+|+.+... +..-|..+++++.+.++||.+|+...
T Consensus 126 --~al~~aDlVIeAVpe--~~~vk~~v~~~l~~~~~~~aIlasnT 166 (460)
T 3k6j_A 126 --HKLSNCDLIVESVIE--DMKLKKELFANLENICKSTCIFGTNT 166 (460)
T ss_dssp --GGCTTCSEEEECCCS--CHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred --HHHccCCEEEEcCCC--CHHHHHHHHHHHHhhCCCCCEEEecC
Confidence 234579999987633 45678999999999999999887654
No 383
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=96.60 E-value=0.0036 Score=58.97 Aligned_cols=96 Identities=7% Similarity=-0.111 Sum_probs=65.3
Q ss_pred cCCCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc--cc-ccC--cCCC
Q 021008 119 SRFPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD--IM-NVS--SALK 192 (318)
Q Consensus 119 ~~~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD--a~-~l~--~~l~ 192 (318)
..++++||.+| +|++|..++.+|+. .|++|+++|.+++..+.++++ |. ...+-..+ .. .+. ..-.
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~-----g~--~~~~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRM--AGAIPLVTAGSQKKLQMAEKL-----GA--AAGFNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHH-----TC--SEEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHc-----CC--cEEEecCChHHHHHHHHHhcCC
Confidence 46789999999 78899999999986 499999999999988888654 21 11111111 00 010 1113
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+|+-.+-. ..+....+.|++||+++.-.
T Consensus 231 ~~d~vi~~~G~--------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 231 GVNLILDCIGG--------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp CEEEEEESSCG--------GGHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCCc--------hHHHHHHHhccCCCEEEEEe
Confidence 69999866521 14566778999999998765
No 384
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=96.59 E-value=0.0049 Score=58.14 Aligned_cols=96 Identities=8% Similarity=0.088 Sum_probs=65.4
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc--cc-ccC--cCCC
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD--IM-NVS--SALK 192 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD--a~-~l~--~~l~ 192 (318)
..++++||..|+ |++|..++.+|+. .|++|+++|.+++..+.++++ |. ...+-..+ .. .+. ....
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~-----ga--~~~~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARA--YGLKILGTAGTEEGQKIVLQN-----GA--HEVFNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHT-----TC--SEEEETTSTTHHHHHHHHHCTT
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHH--CCCEEEEEeCChhHHHHHHHc-----CC--CEEEeCCCchHHHHHHHHcCCC
Confidence 467899999997 8899999999986 489999999999888876543 32 11111111 00 010 1112
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+|+|+-.+- . ..+....+.|+|||+++.-.
T Consensus 239 ~~D~vi~~~G------~--~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 239 GIDIIIEMLA------N--VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp CEEEEEESCH------H--HHHHHHHHHEEEEEEEEECC
T ss_pred CcEEEEECCC------h--HHHHHHHHhccCCCEEEEEe
Confidence 6999986652 1 24667789999999998755
No 385
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.59 E-value=0.023 Score=53.22 Aligned_cols=106 Identities=11% Similarity=0.086 Sum_probs=66.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHH-HHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSK-ALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~-Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
....||..||+|.+|.+............+|+.+|++++..+. +..+.....-++.++++..++. .++...|+|+
T Consensus 4 ~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~----~al~~aDvVi 79 (316)
T 1ldn_A 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----DDCRDADLVV 79 (316)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----GGTTTCSEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcH----HHhCCCCEEE
Confidence 3567999999999888765544432234589999999975442 4455443112223566664432 2355799999
Q ss_pred eccccCCC------------hhHHHHHHHHHHHhccCCeEEEEE
Q 021008 199 LAALVGMD------------KDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 199 ~aalvgm~------------~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
+++-++.. .+-+.++.+.+.+. .|.+.+++-
T Consensus 80 ia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv~ 122 (316)
T 1ldn_A 80 ICAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVA 122 (316)
T ss_dssp ECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEEC
T ss_pred EcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEEe
Confidence 88755321 13456666666665 588877664
No 386
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=96.59 E-value=0.0014 Score=60.88 Aligned_cols=95 Identities=9% Similarity=0.062 Sum_probs=64.5
Q ss_pred CCCC-EEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccc-cccCcC--CCCc
Q 021008 120 RFPT-KIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDI-MNVSSA--LKDY 194 (318)
Q Consensus 120 ~~~~-rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa-~~l~~~--l~~f 194 (318)
.+++ +||.+|+ |++|..++.+|+.. |++|++++.+++..+.++++ |. + ..+-..+. .+.... ...+
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~l-----Ga-~-~v~~~~~~~~~~~~~~~~~~~ 218 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQL-----GA-S-EVISREDVYDGTLKALSKQQW 218 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHHH-----TC-S-EEEEHHHHCSSCCCSSCCCCE
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-----CC-c-EEEECCCchHHHHHHhhcCCc
Confidence 4554 8999997 99999999999864 89999999999888887753 22 1 11111111 111011 1369
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+||-.. | . ..+....+.++|||+++.-.
T Consensus 219 d~vid~~--g----~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 219 QGAVDPV--G----G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEEEESC--C----T--HHHHHHHTTEEEEEEEEECC
T ss_pred cEEEECC--c----H--HHHHHHHHhhcCCCEEEEEe
Confidence 9988554 2 1 25777889999999998764
No 387
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.57 E-value=0.0057 Score=57.89 Aligned_cols=104 Identities=17% Similarity=0.204 Sum_probs=69.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcC------CC-CC---------CCeEEEEcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSD------PD-LS---------TRMFFHTTD 183 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~------~g-l~---------~ri~f~~gD 183 (318)
+...+|..||+|.+|-.-...... .|..|+-+|+++++++.+.+.+++. .| +. .++++. .|
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~--~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~ 80 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFAS--GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TN 80 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHH--TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CC
T ss_pred CCCCeEEEECCcHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cc
Confidence 445799999999877653333223 4999999999999998886554320 11 11 234443 22
Q ss_pred ccccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 184 IMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 184 a~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+...+...|+|+ .+.. -+.+-|.++|+++-++++|+.+|.-++
T Consensus 81 ---l~~a~~~ad~Vi-Eav~-E~l~iK~~lf~~l~~~~~~~aIlaSNT 123 (319)
T 3ado_A 81 ---LAEAVEGVVHIQ-ECVP-ENLDLKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp ---HHHHTTTEEEEE-ECCC-SCHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred ---hHhHhccCcEEe-eccc-cHHHHHHHHHHHHHHHhhhcceeehhh
Confidence 222345678877 4422 267899999999999999999988766
No 388
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=96.55 E-value=0.0087 Score=55.86 Aligned_cols=97 Identities=22% Similarity=0.290 Sum_probs=65.9
Q ss_pred CCCCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
...++|.+||+|.+|.+- ..++ .|..|+.+|++++.++.+.+.+.. . .-.++++. .|.. +....|+|+
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la----aG~~V~v~d~~~~~~~~~~~~l~~-~-~~~~i~~~-~~~~----~~~~aDlVi 78 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA----SKHEVVLQDVSEKALEAAREQIPE-E-LLSKIEFT-TTLE----KVKDCDIVM 78 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH----TTSEEEEECSCHHHHHHHHHHSCG-G-GGGGEEEE-SSCT----TGGGCSEEE
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH----cCCEEEEEECCHHHHHHHHHHHHH-H-HhCCeEEe-CCHH----HHcCCCEEE
Confidence 456899999999877653 2333 288999999999999988776211 0 11355543 2332 245789999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+... +..-|..++.++... ||.+++...
T Consensus 79 eavpe--~~~vk~~l~~~l~~~--~~~Ilasnt 107 (293)
T 1zej_A 79 EAVFE--DLNTKVEVLREVERL--TNAPLCSNT 107 (293)
T ss_dssp ECCCS--CHHHHHHHHHHHHTT--CCSCEEECC
T ss_pred EcCcC--CHHHHHHHHHHHhcC--CCCEEEEEC
Confidence 77543 456688999998765 988887654
No 389
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.54 E-value=0.0076 Score=59.40 Aligned_cols=102 Identities=22% Similarity=0.271 Sum_probs=66.9
Q ss_pred CEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc--CCCC---------CCCeEEEEccccccCcC
Q 021008 123 TKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSS--DPDL---------STRMFFHTTDIMNVSSA 190 (318)
Q Consensus 123 ~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~--~~gl---------~~ri~f~~gDa~~l~~~ 190 (318)
+||.+||+|.+|.+. ..||+ .|.+|+++|+|++.++..++-... ..|+ ..++++. .|..+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~---~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea--- 75 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE---LGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQA--- 75 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHH---
T ss_pred CEEEEECcCHHHHHHHHHHHh---cCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHH---
Confidence 589999999887764 34554 388999999999888776552110 0111 2345553 343332
Q ss_pred CCCccEEEeccccCC------ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 191 LKDYEVVFLAALVGM------DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 191 l~~fD~V~~aalvgm------~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....|+|+++.--.. +...-..+++.+.+.+++|.+++..+
T Consensus 76 ~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 76 VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 236899997752110 11256788999999999998888766
No 390
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.51 E-value=0.0043 Score=61.61 Aligned_cols=105 Identities=23% Similarity=0.241 Sum_probs=69.1
Q ss_pred CCCCEEEEEccCCChHH-HHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc--CCCC---------CCCeEEEEcccccc
Q 021008 120 RFPTKIAFIGSGPLPLT-SIVLAINHLTTTCFDNYDIDPSANSKALSLVSS--DPDL---------STRMFFHTTDIMNV 187 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~t-ai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~--~~gl---------~~ri~f~~gDa~~l 187 (318)
....||..||+|.+|.+ +.+||+ .|.+|+++|+|++.++..++-... ..|+ ..++++. .|..+
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~---~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t-td~~~- 80 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLAD---IGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS-TDIEA- 80 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-CCHHH-
T ss_pred CCCceEEEECcCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE-CCHHH-
Confidence 45689999999987775 456665 388999999999988877653110 0122 1345542 23321
Q ss_pred CcCCCCccEEEeccccCC------ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 188 SSALKDYEVVFLAALVGM------DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 188 ~~~l~~fD~V~~aalvgm------~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.....|+||++--.+. +......+++.+.+.++||.+++..+
T Consensus 81 --a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 81 --AVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp --HHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred --HhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 1236899997742110 12577889999999999998887665
No 391
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=96.49 E-value=0.012 Score=53.59 Aligned_cols=87 Identities=16% Similarity=0.310 Sum_probs=58.8
Q ss_pred CEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEecc
Q 021008 123 TKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAA 201 (318)
Q Consensus 123 ~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aa 201 (318)
.+|.+||+ |.+|.+......+ .|.+|+.+|.+++..+..++ .|. ++ .+ ........|+|+++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~--~g~~V~~~~r~~~~~~~~~~-----~g~----~~--~~---~~~~~~~aDvVi~av 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD--SAHHLAAIEIAPEGRDRLQG-----MGI----PL--TD---GDGWIDEADVVVLAL 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH--SSSEEEEECCSHHHHHHHHH-----TTC----CC--CC---SSGGGGTCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHh-----cCC----Cc--CC---HHHHhcCCCEEEEcC
Confidence 59999999 9877664332222 37899999999987766544 232 11 12 222234789999876
Q ss_pred ccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 202 LVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 202 lvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
+...-.++++++...++||.+++-
T Consensus 76 ----~~~~~~~v~~~l~~~l~~~~ivv~ 99 (286)
T 3c24_A 76 ----PDNIIEKVAEDIVPRVRPGTIVLI 99 (286)
T ss_dssp ----CHHHHHHHHHHHGGGSCTTCEEEE
T ss_pred ----CchHHHHHHHHHHHhCCCCCEEEE
Confidence 344567888888888998876654
No 392
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.43 E-value=0.013 Score=53.18 Aligned_cols=99 Identities=8% Similarity=0.008 Sum_probs=60.0
Q ss_pred CEEEEEccCCChHHHHH-HHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCC----CeEEEEccccccCcCCCCccEE
Q 021008 123 TKIAFIGSGPLPLTSIV-LAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLST----RMFFHTTDIMNVSSALKDYEVV 197 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~-LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~----ri~f~~gDa~~l~~~l~~fD~V 197 (318)
.||++||+|.+|..... |++ .|.+|+.+|.+++..+..++.-....+.+. ++++. +..++......+|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~v 78 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ---GGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIF--SPEEIDHQNEQVDLI 78 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEE--CGGGCCTTSCCCSEE
T ss_pred CeEEEECcCHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceee--cchhhcccCCCCCEE
Confidence 58999999987765433 333 378999999999877665432110000000 11111 111222222379999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
+++- +...-..+++.+.+.++||..++.-
T Consensus 79 i~~v----~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 79 IALT----KAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp EECS----CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EEEe----ccccHHHHHHHHHHhcCCCCEEEEe
Confidence 9875 3345677888999999998876654
No 393
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.42 E-value=0.0053 Score=57.63 Aligned_cols=120 Identities=10% Similarity=0.169 Sum_probs=69.1
Q ss_pred hHHHhhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCC-eEEE
Q 021008 102 NYIKLSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTR-MFFH 180 (318)
Q Consensus 102 ny~~L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~r-i~f~ 180 (318)
-+.+|.+..-.. ...++++|+|+||+|+|.|-. ++++. +-..|+|+|+........+. ... ++.+ +.+.
T Consensus 66 aa~KL~ei~ek~----l~~~g~~vlDLGaaPGgWsqv-a~~~~-gv~sV~Gvdlg~~~~~~P~~-~~~---~~~~iv~~~ 135 (300)
T 3eld_A 66 GAAKIRWLHERG----YLRITGRVLDLGCGRGGWSYY-AAAQK-EVMSVKGYTLGIEGHEKPIH-MQT---LGWNIVKFK 135 (300)
T ss_dssp THHHHHHHHHHT----SCCCCEEEEEETCTTCHHHHH-HHTST-TEEEEEEECCCCTTSCCCCC-CCB---TTGGGEEEE
T ss_pred HHHHHHHHHHhC----CCCCCCEEEEcCCCCCHHHHH-HHHhc-CCceeeeEEecccccccccc-ccc---cCCceEEee
Confidence 445666555332 237889999999999999964 44322 34479999997532110000 001 1222 3333
Q ss_pred Ec-cccccCcCCCCccEEEecccc--CCCh---hHHHHHHHHHHHhccCC-eEEEEEcCC
Q 021008 181 TT-DIMNVSSALKDYEVVFLAALV--GMDK---DEKIRVIDHLAKYMAPG-ALLMLRSAH 233 (318)
Q Consensus 181 ~g-Da~~l~~~l~~fD~V~~aalv--gm~~---~~k~~vl~~l~r~LkpG-g~lv~r~~~ 233 (318)
.+ |+..++ -..||+|+.+... |... ..-..+++-..+.|+|| |.|++--..
T Consensus 136 ~~~di~~l~--~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 136 DKSNVFTMP--TEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CSCCTTTSC--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCceeeecC--CCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 22 433432 2479999976422 2211 11134566667899999 999997765
No 394
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=96.42 E-value=0.0045 Score=58.04 Aligned_cols=91 Identities=9% Similarity=-0.028 Sum_probs=60.7
Q ss_pred CEEEEE-ccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc---CC---CCcc
Q 021008 123 TKIAFI-GSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS---AL---KDYE 195 (318)
Q Consensus 123 ~rVL~I-GsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~---~l---~~fD 195 (318)
++|+.. |+|++|..++.+|+.. |++|+++|.+++..+.++++ |.. . ++..+-.++.. +. ..+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~~-----Ga~--~-~~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKDI-----GAA--H-VLNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHH-----TCS--E-EEETTSTTHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHc-----CCC--E-EEECCcHHHHHHHHHHhcCCCCc
Confidence 566554 8999999999999864 99999999999998888754 211 1 11111111110 00 2699
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+-.+- . ..+....+.|+|||+++.-.
T Consensus 236 ~vid~~g-----~---~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 236 IFLDAVT-----G---PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp EEEESSC-----H---HHHHHHHHHSCTTCEEEECC
T ss_pred EEEECCC-----C---hhHHHHHhhhcCCCEEEEEe
Confidence 9985542 1 12366778999999998865
No 395
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=96.39 E-value=0.0026 Score=60.48 Aligned_cols=97 Identities=6% Similarity=0.016 Sum_probs=62.9
Q ss_pred CCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccc-cCc-CCCCccE
Q 021008 120 RFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMN-VSS-ALKDYEV 196 (318)
Q Consensus 120 ~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~-l~~-~l~~fD~ 196 (318)
.++++||.+|+ |++|..++.+|+. .|++|+++. +++..+.+++ +|...-+.+...|..+ +.. ..+.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~--~Ga~Vi~~~-~~~~~~~~~~-----lGa~~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRL--SGYIPIATC-SPHNFDLAKS-----RGAEEVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHH--TTCEEEEEE-CGGGHHHHHH-----TTCSEEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHH--CCCEEEEEe-CHHHHHHHHH-----cCCcEEEECCCchHHHHHHHHccCCccE
Confidence 67899999999 8899999999986 499999985 8887777765 3321111111112111 100 1125999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhc-cCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYM-APGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~L-kpGg~lv~r~ 231 (318)
||-.. | -...++...+.| ++||+++.-.
T Consensus 235 v~d~~--g-----~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 235 ALDCI--T-----NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEESS--C-----SHHHHHHHHHHSCTTCEEEEESS
T ss_pred EEECC--C-----chHHHHHHHHHhhcCCCEEEEEe
Confidence 98543 2 123566677888 6999998754
No 396
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=96.37 E-value=0.014 Score=53.04 Aligned_cols=91 Identities=16% Similarity=0.169 Sum_probs=59.5
Q ss_pred CCEEEEEccCCChHHHHH-HHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 122 PTKIAFIGSGPLPLTSIV-LAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~-LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
.++|.+||+|.+|.+... |++. ..+.+|+++|.+++..+.+++ .|... . ...|..+ .....|+|+++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~~-----~g~~~--~-~~~~~~~---~~~~aDvVila 73 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD-HPHYKIVGYNRSDRSRDIALE-----RGIVD--E-ATADFKV---FAALADVIILA 73 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CTTSEEEEECSSHHHHHHHHH-----TTSCS--E-EESCTTT---TGGGCSEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhC-CCCcEEEEEcCCHHHHHHHHH-----cCCcc--c-ccCCHHH---hhcCCCEEEEc
Confidence 368999999988776433 3332 236799999999987776543 23211 1 1223222 23468999987
Q ss_pred cccCCChhHHHHHHHHHHHh-ccCCeEEE
Q 021008 201 ALVGMDKDEKIRVIDHLAKY-MAPGALLM 228 (318)
Q Consensus 201 alvgm~~~~k~~vl~~l~r~-LkpGg~lv 228 (318)
. +...-..+++++... ++||.+++
T Consensus 74 v----p~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 74 V----PIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp S----CHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred C----CHHHHHHHHHHHHhcCCCCCCEEE
Confidence 6 334446788888888 88887766
No 397
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.36 E-value=0.011 Score=56.33 Aligned_cols=98 Identities=12% Similarity=0.115 Sum_probs=65.6
Q ss_pred CCCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc---C--CCCCCCeEEEEccccccCcCCCCc
Q 021008 121 FPTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSS---D--PDLSTRMFFHTTDIMNVSSALKDY 194 (318)
Q Consensus 121 ~~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~---~--~gl~~ri~f~~gDa~~l~~~l~~f 194 (318)
..+||.+||+|.+|.+. ..|++ .|..|+.+|++++.++..++.-.. . ..+..++++. .|..+ .....
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~---~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~e---a~~~a 100 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLAR---KGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKA---SLEGV 100 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHT---TTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHH---HHTTC
T ss_pred cCCeEEEECccHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHH---HHhcC
Confidence 35799999999887664 33443 478999999999887766553211 0 1123445542 33322 22468
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
|+|+++- +.....++++++...++||..++.
T Consensus 101 DvVilaV----p~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 101 TDILIVV----PSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp CEEEECC----CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CEEEECC----CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 9999775 456778899999999999887654
No 398
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=96.30 E-value=0.0018 Score=61.05 Aligned_cols=102 Identities=5% Similarity=-0.061 Sum_probs=61.2
Q ss_pred cCCC-CEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEE---ccccc-cCc---
Q 021008 119 SRFP-TKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHT---TDIMN-VSS--- 189 (318)
Q Consensus 119 ~~~~-~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~---gDa~~-l~~--- 189 (318)
..++ ++||.+|+ |++|..++.+|+.. |++|+++..+++..+..++.+++ .|...-+.... .|..+ +..
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~-lGa~~vi~~~~~~~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKE-LGATQVITEDQNNSREFGPTIKEWIK 240 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHH-HTCSEEEEHHHHHCGGGHHHHHHHHH
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHh-cCCeEEEecCccchHHHHHHHHHHhh
Confidence 3677 99999997 99999999999864 99999998766542222223333 34321111110 12111 110
Q ss_pred -CCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 190 -ALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 190 -~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.-..+|+||-.. | . .... ...+.|+|||+++.-.
T Consensus 241 ~~~~g~Dvvid~~--G----~-~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 241 QSGGEAKLALNCV--G----G-KSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHTCCEEEEEESS--C----H-HHHH-HHHHTSCTTCEEEECC
T ss_pred ccCCCceEEEECC--C----c-hhHH-HHHHHhccCCEEEEec
Confidence 113799998554 2 1 1122 5568999999998754
No 399
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.28 E-value=0.036 Score=51.49 Aligned_cols=99 Identities=20% Similarity=0.224 Sum_probs=60.9
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCc--EEEEEeCChHHHHH-HHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTT--CFDNYDIDPSANSK-ALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga--~V~gvDid~~ai~~-Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
+||..||+|.+|.+....... .|. .|+.+|++++.++. +..+... ..+..++++...|. .++...|+|++
T Consensus 1 mkI~VIGaG~vG~~la~~la~--~g~~~eV~L~D~~~~~~~~~~~~l~~~-~~~~~~~~i~~~~~----~a~~~aDvVIi 73 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVL--RGSCSELVLVDRDEDRAQAEAEDIAHA-APVSHGTRVWHGGH----SELADAQVVIL 73 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSSHHHHHHHHHHHTTS-CCTTSCCEEEEECG----GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCCHHHHHHHHHhhhhh-hhhcCCeEEEECCH----HHhCCCCEEEE
Confidence 489999999988876554443 254 89999999986553 4444333 22223455544342 23457899998
Q ss_pred ccccCC------------ChhHHHHHHHHHHHhccCCeEEEE
Q 021008 200 AALVGM------------DKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 200 aalvgm------------~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
++-++. +.+-+.++++.+.+. .|++.+++
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~ 114 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLV 114 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEE
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEE
Confidence 874421 112346677777776 69998776
No 400
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.26 E-value=0.016 Score=50.58 Aligned_cols=96 Identities=11% Similarity=0.005 Sum_probs=65.5
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC----cCCCCccEEE
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS----SALKDYEVVF 198 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~----~~l~~fD~V~ 198 (318)
++|+.+|+|.+|......... .|..|+.+|.|++.++... .. ..+.++.||+.+.. .....+|+|+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~--~g~~v~vid~~~~~~~~l~---~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLS--RKYGVVIINKDRELCEEFA---KK-----LKATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHH---HH-----SSSEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCeEEEEECCHHHHHHHH---HH-----cCCeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 479999999877664433333 4889999999998766532 22 23578999998631 1345789888
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
++. +......++..+++.+.|...++.|..
T Consensus 71 ~~~----~~d~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 71 ILT----PRDEVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp ECC----SCHHHHHHHHHHHHHTSCCCEEEECCC
T ss_pred Eec----CCcHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 654 223445566677777888888888763
No 401
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.24 E-value=0.01 Score=56.89 Aligned_cols=60 Identities=8% Similarity=-0.071 Sum_probs=48.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV 187 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l 187 (318)
++..|++||.|++.+|...+.+. ...+|++||+|+..+..-++.. . .++++++.+|+.++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~--~~~~vvavE~D~~l~~~L~~~~-~----~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKY--CPRQYSLLEKRSSLYKFLNAKF-E----GSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHH--CCSEEEEECCCHHHHHHHHHHT-T----TSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhC--CCCEEEEEecCHHHHHHHHHhc-c----CCCEEEEECCccch
Confidence 46899999999999998766432 3568999999999888777665 2 26899999999765
No 402
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.23 E-value=0.0046 Score=63.63 Aligned_cols=106 Identities=16% Similarity=0.196 Sum_probs=72.5
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCC------C-----CcEEEEEeC---ChHHHHHH-----------HHHhhcCC----
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHL------T-----TTCFDNYDI---DPSANSKA-----------LSLVSSDP---- 171 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~------~-----ga~V~gvDi---d~~ai~~A-----------r~~~~~~~---- 171 (318)
++-+|+++|-| +|+..+.+.+... | ..+++.+|. +.+.+..| +++.+.-.
T Consensus 58 ~~~~i~e~gfG-~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 58 QSCIFAETGFG-TGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SEEEEEEECCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CceEEEEecCc-hHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 45699999999 7999887765320 1 157999999 44444432 23333200
Q ss_pred C-----CC---CCeEEEEccccccCcCC-----CCccEEEeccccCCChhHH------HHHHHHHHHhccCCeEEEEEc
Q 021008 172 D-----LS---TRMFFHTTDIMNVSSAL-----KDYEVVFLAALVGMDKDEK------IRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 172 g-----l~---~ri~f~~gDa~~l~~~l-----~~fD~V~~aalvgm~~~~k------~~vl~~l~r~LkpGg~lv~r~ 231 (318)
| +. -+++++.||+.+....+ ..||.+|++++- +.| .+++..+++.++|||++....
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~----p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFA----PAKNPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSC----C--CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCC----CCCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 1 11 25778999998754443 479999999874 344 789999999999999998765
No 403
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.21 E-value=0.02 Score=53.79 Aligned_cols=105 Identities=17% Similarity=0.211 Sum_probs=61.5
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHH-HHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANS-KALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~-~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..+.||..||+|..|.+............+|+.+|++++.++ .+..+... ..+..++++..+|- .++...|+|+
T Consensus 5 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~-~~~~~~~~i~~~~~----~a~~~aDvVi 79 (318)
T 1y6j_A 5 KSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHG-LPFMGQMSLYAGDY----SDVKDCDVIV 79 (318)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTS-CCCTTCEEEC--CG----GGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHh-HHhcCCeEEEECCH----HHhCCCCEEE
Confidence 356899999999988887655543222348999999987654 35555443 22335666664432 2355899999
Q ss_pred eccccCC----ChhH--------HHHHHHHHHHhccCCeEEEEE
Q 021008 199 LAALVGM----DKDE--------KIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 199 ~aalvgm----~~~~--------k~~vl~~l~r~LkpGg~lv~r 230 (318)
+.+-++. ...+ -.++.+.+.+. .|++.+++-
T Consensus 80 i~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (318)
T 1y6j_A 80 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 122 (318)
T ss_dssp ECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred EcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 8875522 1111 13455555554 699998884
No 404
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=96.21 E-value=0.0072 Score=56.75 Aligned_cols=97 Identities=8% Similarity=-0.033 Sum_probs=65.6
Q ss_pred cCCC--CEEEEEcc-CCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcc--ccc-cCc-C
Q 021008 119 SRFP--TKIAFIGS-GPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTD--IMN-VSS-A 190 (318)
Q Consensus 119 ~~~~--~rVL~IGs-Gplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gD--a~~-l~~-~ 190 (318)
..++ ++||..|+ |++|..++.+|+. .|+ +|+++|.+++..+.+++. .|. ...+-..+ ..+ +.. .
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~--~Ga~~Vi~~~~~~~~~~~~~~~----~g~--~~~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHF--LGCSRVVGICGTHEKCILLTSE----LGF--DAAINYKKDNVAEQLRESC 227 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHT----SCC--SEEEETTTSCHHHHHHHHC
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHH--CCCCeEEEEeCCHHHHHHHHHH----cCC--ceEEecCchHHHHHHHHhc
Confidence 4677 99999997 8899999999986 488 999999999877776542 232 11111111 100 100 0
Q ss_pred CCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 191 LKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 191 l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.+.+|+|+-.+- . ..++...+.|++||+++.-.
T Consensus 228 ~~~~d~vi~~~G------~--~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 228 PAGVDVYFDNVG------G--NISDTVISQMNENSHIILCG 260 (357)
T ss_dssp TTCEEEEEESCC------H--HHHHHHHHTEEEEEEEEECC
T ss_pred CCCCCEEEECCC------H--HHHHHHHHHhccCcEEEEEC
Confidence 116999986652 1 56788889999999998754
No 405
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.21 E-value=0.021 Score=59.51 Aligned_cols=99 Identities=16% Similarity=0.198 Sum_probs=67.5
Q ss_pred CEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeCChHHHHHHHHHhhc----C--CC---------CCCCeEEEEccccc
Q 021008 123 TKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDIDPSANSKALSLVSS----D--PD---------LSTRMFFHTTDIMN 186 (318)
Q Consensus 123 ~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~----~--~g---------l~~ri~f~~gDa~~ 186 (318)
++|..||+|.+|.... .+|+ .|..|+.+|++++.++.+++.+.. . .| ...++++. .|.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~---aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~-- 386 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALIL---SNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGS-LDY-- 386 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHT---TTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEE-SSS--
T ss_pred cEEEEEcCCHhhHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEe-CCH--
Confidence 5799999998876533 3443 488999999999999887543211 0 11 12355543 333
Q ss_pred cCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 187 VSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 187 l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
......|+|+.+..- +..-|..++.++.+.++||.+|+...
T Consensus 387 --~~~~~aDlVIeaVpe--~~~vk~~v~~~l~~~~~~~~Ilasnt 427 (725)
T 2wtb_A 387 --ESFRDVDMVIEAVIE--NISLKQQIFADLEKYCPQHCILASNT 427 (725)
T ss_dssp --GGGTTCSEEEECCCS--CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred --HHHCCCCEEEEcCcC--CHHHHHHHHHHHHhhCCCCcEEEeCC
Confidence 234578999977532 44568899999999999999876544
No 406
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=96.20 E-value=0.007 Score=57.01 Aligned_cols=96 Identities=11% Similarity=0.075 Sum_probs=57.7
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEE-eCChH---HHHHHHHHhhcCCCCCCCeEEEE-----ccccccC
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNY-DIDPS---ANSKALSLVSSDPDLSTRMFFHT-----TDIMNVS 188 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gv-Did~~---ai~~Ar~~~~~~~gl~~ri~f~~-----gDa~~l~ 188 (318)
..++++||.+|+ |++|..++.+|+.. |++++++ +.++. ..+.+ ++ .|.. -.+-. .++.++.
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~----~~-lGa~--~vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAAL--GLRTINVVRDRPDIQKLSDRL----KS-LGAE--HVITEEELRRPEMKNFF 235 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEECCCSCHHHHHHHH----HH-TTCS--EEEEHHHHHSGGGGGTT
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHc--CCEEEEEecCccchHHHHHHH----Hh-cCCc--EEEecCcchHHHHHHHH
Confidence 368899999997 99999999999864 8876555 44443 23333 33 4432 11211 1222222
Q ss_pred cCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 189 SALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 189 ~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+.+|+||-.. | .. .. ....+.|+|||+++.-.
T Consensus 236 ~~~~~~Dvvid~~--g---~~--~~-~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 236 KDMPQPRLALNCV--G---GK--SS-TELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSSCCCSEEEESS--C---HH--HH-HHHHTTSCTTCEEEECC
T ss_pred hCCCCceEEEECC--C---cH--HH-HHHHHhhCCCCEEEEEe
Confidence 2212599998543 2 11 12 34578999999998754
No 407
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.07 E-value=0.038 Score=52.32 Aligned_cols=104 Identities=13% Similarity=0.178 Sum_probs=73.6
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCC--------------------CCCCeEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPD--------------------LSTRMFF 179 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~g--------------------l~~ri~f 179 (318)
.+...|+.+||| +-..+..+...+ +++++.-||. |+.++.-++++.. .+ .+++.++
T Consensus 96 ~~~~qVV~LGaG-lDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 171 (334)
T 1rjd_A 96 NEKVQVVNLGCG-SDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRE-SEILRISLGLSKEDTAKSPFLIDQGRYKL 171 (334)
T ss_dssp CSSEEEEEETCT-TCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHH-SHHHHHHHTCCSSCCCCTTEEEECSSEEE
T ss_pred CCCcEEEEeCCC-CccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhh-ccchhhhcccccccccccccccCCCceEE
Confidence 456899999999 677777776543 6788888888 9999999988876 32 1478999
Q ss_pred EEccccccC------cCC---CCccEEEecccc-CCChhHHHHHHHHHHHhccCCeEEE
Q 021008 180 HTTDIMNVS------SAL---KDYEVVFLAALV-GMDKDEKIRVIDHLAKYMAPGALLM 228 (318)
Q Consensus 180 ~~gDa~~l~------~~l---~~fD~V~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv 228 (318)
+.+|+.+.. ... +...+++...++ =|+.+.-.++++.+.+.. |||.++
T Consensus 172 v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 172 AACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp EECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEE
T ss_pred EecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEE
Confidence 999998731 111 123344444432 447788889999999877 666664
No 408
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.01 E-value=0.014 Score=54.48 Aligned_cols=92 Identities=16% Similarity=0.079 Sum_probs=57.4
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCC-cEEEEEeCChHHH----HHHHHHhhcCCCCCCCeEEEEc-cccccCcCCCCcc
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTT-TCFDNYDIDPSAN----SKALSLVSSDPDLSTRMFFHTT-DIMNVSSALKDYE 195 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~g-a~V~gvDid~~ai----~~Ar~~~~~~~gl~~ri~f~~g-Da~~l~~~l~~fD 195 (318)
.++|.+||+|.+|.+......+ .| ..|+++|++++.. +...++. . .|. .. +..++ ....|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~--~G~~~V~~~dr~~~~~~~~~~~~~~~~-~-~g~-------~~~s~~e~---~~~aD 89 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGG--RNAARLAAYDLRFNDPAASGALRARAA-E-LGV-------EPLDDVAG---IACAD 89 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TTCSEEEEECGGGGCTTTHHHHHHHHH-H-TTC-------EEESSGGG---GGGCS
T ss_pred CCeEEEECccHHHHHHHHHHHH--cCCCeEEEEeCCCccccchHHHHHHHH-H-CCC-------CCCCHHHH---HhcCC
Confidence 4699999999887664332222 37 8999999998321 2222222 2 232 22 33332 23689
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+|+++- +...-.+.++.+...++||.+++-.+
T Consensus 90 vVi~av----p~~~~~~~~~~i~~~l~~~~ivv~~s 121 (317)
T 4ezb_A 90 VVLSLV----VGAATKAVAASAAPHLSDEAVFIDLN 121 (317)
T ss_dssp EEEECC----CGGGHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEEEec----CCHHHHHHHHHHHhhcCCCCEEEECC
Confidence 999775 23344556788999999998776544
No 409
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.95 E-value=0.018 Score=53.09 Aligned_cols=90 Identities=9% Similarity=0.029 Sum_probs=59.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
..+++|+.||+|.+|......++.+ |++|+++|.+++..+.+. . .|. ++.. ..++...+..+|+|++
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~----~-~g~----~~~~--~~~l~~~l~~aDvVi~ 219 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIA----E-MGM----EPFH--ISKAAQELRDVDVCIN 219 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----H-TTS----EEEE--GGGHHHHTTTCSEEEE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHH----H-CCC----eecC--hhhHHHHhcCCCEEEE
Confidence 5789999999999988887777754 889999999997654443 2 232 2221 1223223458999998
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
+.-.++- .+ +..+.|+||++++-
T Consensus 220 ~~p~~~i--~~-----~~l~~mk~~~~lin 242 (293)
T 3d4o_A 220 TIPALVV--TA-----NVLAEMPSHTFVID 242 (293)
T ss_dssp CCSSCCB--CH-----HHHHHSCTTCEEEE
T ss_pred CCChHHh--CH-----HHHHhcCCCCEEEE
Confidence 7643331 12 12357999987653
No 410
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.95 E-value=0.05 Score=54.12 Aligned_cols=105 Identities=21% Similarity=0.281 Sum_probs=67.6
Q ss_pred CCCCEEEEEccCCChHHH-HHHHHhCCCCc-EEEEEeCChH----HHHHHHHHhhc----CCCC---------CCCeEEE
Q 021008 120 RFPTKIAFIGSGPLPLTS-IVLAINHLTTT-CFDNYDIDPS----ANSKALSLVSS----DPDL---------STRMFFH 180 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~ta-i~LA~~~~~ga-~V~gvDid~~----ai~~Ar~~~~~----~~gl---------~~ri~f~ 180 (318)
.+-++|.+||+|.+|.+. ..||+. +|. .|+++|+|++ .++.-++-... ..|+ ..++++.
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~--~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~t 93 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADA--PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECT 93 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHS--TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHh--CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEe
Confidence 455799999999988774 455652 488 9999999998 66654431100 0111 2456653
Q ss_pred EccccccCcCCCCccEEEeccccCC--------ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 181 TTDIMNVSSALKDYEVVFLAALVGM--------DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 181 ~gDa~~l~~~l~~fD~V~~aalvgm--------~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
.|. + .....|+|+++---+. +...-..+.+.+.+.++||.+++..+
T Consensus 94 -td~-e---a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 147 (478)
T 3g79_A 94 -PDF-S---RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLES 147 (478)
T ss_dssp -SCG-G---GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred -CcH-H---HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 342 2 2346899997643221 22334567789999999999887766
No 411
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.95 E-value=0.013 Score=56.16 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=61.0
Q ss_pred CCCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 121 FPTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 121 ~~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
..++|.+||+|.+|... ..|++ .|..|+++|++++.++...+ .|. . ...+..++.......|+||+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~---~G~~V~v~dr~~~~~~~l~~-----~g~----~-~~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRK---GGHECVVYDLNVNAVQALER-----EGI----A-GARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHT-----TTC----B-CCSSHHHHHHHSCSSCEEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHH-----CCC----E-EeCCHHHHHhcCCCCCEEEE
Confidence 45799999999887764 33443 38899999999987665432 222 1 12233333222234599997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+- +...-..+++.+...++||.+++--+
T Consensus 88 ~v----p~~~v~~vl~~l~~~l~~g~iiId~s 115 (358)
T 4e21_A 88 MV----PAAVVDSMLQRMTPLLAANDIVIDGG 115 (358)
T ss_dssp CS----CGGGHHHHHHHHGGGCCTTCEEEECS
T ss_pred eC----CHHHHHHHHHHHHhhCCCCCEEEeCC
Confidence 64 22356678899999999988776533
No 412
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.94 E-value=0.036 Score=42.47 Aligned_cols=70 Identities=19% Similarity=0.168 Sum_probs=48.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCC-cEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc---CcCCCCccE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTT-TCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV---SSALKDYEV 196 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~g-a~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l---~~~l~~fD~ 196 (318)
..++|+.+|+|.+|......... .| .+|+.+|.+++..+... . .++.++.+|..+. .....++|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~--~g~~~v~~~~r~~~~~~~~~----~-----~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT--SSNYSVTVADHDLAALAVLN----R-----MGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH--CSSEEEEEEESCHHHHHHHH----T-----TTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred CcCeEEEECCCHHHHHHHHHHHh--CCCceEEEEeCCHHHHHHHH----h-----CCCcEEEecCCCHHHHHHHHcCCCE
Confidence 35799999999877765544443 37 89999999997766543 2 3456777887652 222347999
Q ss_pred EEecc
Q 021008 197 VFLAA 201 (318)
Q Consensus 197 V~~aa 201 (318)
|+..+
T Consensus 73 vi~~~ 77 (118)
T 3ic5_A 73 VISAA 77 (118)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 99766
No 413
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=95.93 E-value=0.017 Score=60.13 Aligned_cols=101 Identities=15% Similarity=0.099 Sum_probs=67.9
Q ss_pred CCCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc------CCCC-C--------CCeEEEEccc
Q 021008 121 FPTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSS------DPDL-S--------TRMFFHTTDI 184 (318)
Q Consensus 121 ~~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~------~~gl-~--------~ri~f~~gDa 184 (318)
+-++|.+||+|.+|... ..+++ .|..|+.+|++++.++.+++.+.. ..|. . .++++. .|.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~---aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~ 388 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSAS---KGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPT-LSY 388 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEE-SSS
T ss_pred cCCEEEEECCChhhHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEE-CCH
Confidence 44689999999877653 34444 488999999999998887542211 0121 1 135542 232
Q ss_pred cccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 185 MNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 185 ~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
......|+|+.+... +..-|..++.++.+.++||.+|+...
T Consensus 389 ----~~~~~aDlVIeaV~e--~~~vk~~v~~~l~~~~~~~~Ilasnt 429 (715)
T 1wdk_A 389 ----GDFGNVDLVVEAVVE--NPKVKQAVLAEVENHVREDAILASNT 429 (715)
T ss_dssp ----TTGGGCSEEEECCCS--CHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred ----HHHCCCCEEEEcCCC--CHHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 234578999987532 44568899999999999998876543
No 414
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.92 E-value=0.069 Score=49.87 Aligned_cols=104 Identities=17% Similarity=0.209 Sum_probs=65.6
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHH-HHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEecc
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSK-ALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAA 201 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~-Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aa 201 (318)
+||..||+|..|.+...+........+++-+|++++..+. +..+... ..+..++++..+|- .++...|+|++.+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~-~~~~~~~~v~~~~~----~a~~~aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHA-TPFAHPVWVWAGSY----GDLEGARAVVLAA 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTT-GGGSCCCEEEECCG----GGGTTEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHh-HhhcCCeEEEECCH----HHhCCCCEEEECC
Confidence 4899999999888876655443234689999999876663 5555543 22235667665442 2355899999887
Q ss_pred ccC----CChhH----HHHHHHHHHHhc---cCCeEEEEEc
Q 021008 202 LVG----MDKDE----KIRVIDHLAKYM---APGALLMLRS 231 (318)
Q Consensus 202 lvg----m~~~~----k~~vl~~l~r~L---kpGg~lv~r~ 231 (318)
-++ |...+ -..++.++.+.+ .|.|.+++-+
T Consensus 76 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 116 (310)
T 2xxj_A 76 GVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT 116 (310)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred CCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 552 22111 134444444433 7999888753
No 415
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=95.89 E-value=0.0078 Score=59.65 Aligned_cols=113 Identities=11% Similarity=0.031 Sum_probs=71.2
Q ss_pred ChhhHHHhhHHHHHHHhhcc--cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCC
Q 021008 99 YYSNYIKLSQLEFNILTQHC--SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTR 176 (318)
Q Consensus 99 Y~~ny~~L~~~E~~~l~~~~--~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~r 176 (318)
-|+|+.-+-+.-...+.+.. ...+++|+.||.|.+|......++.+ |++|+.+|+||.....|. . .|.
T Consensus 222 ~fDn~yG~~eslvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lraf--Ga~Viv~d~dp~~a~~A~----~-~G~--- 291 (464)
T 3n58_A 222 KFDNKYGCKESLVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGA--GARVKVTEVDPICALQAA----M-DGF--- 291 (464)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHH----H-TTC---
T ss_pred hhhhhhcchHHHHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHC--CCEEEEEeCCcchhhHHH----h-cCc---
Confidence 46777655555555554433 36889999999999999888888764 999999999996543332 2 222
Q ss_pred eEEEEccccccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcCCC
Q 021008 177 MFFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHG 234 (318)
Q Consensus 177 i~f~~gDa~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~g 234 (318)
++ .+..++ +...|+|+... + .+.-+-++..+.||||++|+ +.++|
T Consensus 292 -~v--v~LeEl---L~~ADIVv~at--g----t~~lI~~e~l~~MK~GAILI-NvGRg 336 (464)
T 3n58_A 292 -EV--VTLDDA---ASTADIVVTTT--G----NKDVITIDHMRKMKDMCIVG-NIGHF 336 (464)
T ss_dssp -EE--CCHHHH---GGGCSEEEECC--S----SSSSBCHHHHHHSCTTEEEE-ECSSS
T ss_pred -ee--ccHHHH---HhhCCEEEECC--C----CccccCHHHHhcCCCCeEEE-EcCCC
Confidence 22 222222 34789988643 1 11111134457899999875 55554
No 416
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.84 E-value=0.025 Score=44.87 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=59.8
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC---c-CCCCccE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS---S-ALKDYEV 196 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~---~-~l~~fD~ 196 (318)
..++|+.+|+|.+|........+ .|.+|+.+|.+++..+.+ .. . ...++.+|..+.. . ....+|+
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~--~g~~v~~~d~~~~~~~~~----~~-~----~~~~~~~d~~~~~~l~~~~~~~~d~ 73 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHR--MGHEVLAVDINEEKVNAY----AS-Y----ATHAVIANATEENELLSLGIRNFEY 73 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHH--TTCCCEEEESCHHHHHTT----TT-T----CSEEEECCTTCHHHHHTTTGGGCSE
T ss_pred cCCcEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHH----HH-h----CCEEEEeCCCCHHHHHhcCCCCCCE
Confidence 34689999999877776554443 478999999998654432 22 1 2356778876421 1 1347899
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|+...-. + .+....+....+.+.+. .++.+..
T Consensus 74 vi~~~~~--~-~~~~~~~~~~~~~~~~~-~ii~~~~ 105 (144)
T 2hmt_A 74 VIVAIGA--N-IQASTLTTLLLKELDIP-NIWVKAQ 105 (144)
T ss_dssp EEECCCS--C-HHHHHHHHHHHHHTTCS-EEEEECC
T ss_pred EEECCCC--c-hHHHHHHHHHHHHcCCC-eEEEEeC
Confidence 8876521 1 13333455566778886 6666553
No 417
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=95.83 E-value=0.011 Score=58.24 Aligned_cols=112 Identities=13% Similarity=0.144 Sum_probs=68.0
Q ss_pred hhhHHHhhHHHHHHHhhcc--cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCe
Q 021008 100 YSNYIKLSQLEFNILTQHC--SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRM 177 (318)
Q Consensus 100 ~~ny~~L~~~E~~~l~~~~--~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri 177 (318)
|+|..-.-+.-...+.+.. ...+++|+.+|.|++|......++.+ |++|+++|+||.....|. . .|.
T Consensus 196 fDn~yGt~~s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~--Ga~Viv~D~dp~ra~~A~----~-~G~---- 264 (435)
T 3gvp_A 196 FDNLYCCRESILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAM--GSIVYVTEIDPICALQAC----M-DGF---- 264 (435)
T ss_dssp HHTHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHH----H-TTC----
T ss_pred hhhhhhhHHHHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCChhhhHHHH----H-cCC----
Confidence 4554433333334443332 25889999999999999988888764 999999999996544432 2 232
Q ss_pred EEEEccccccCcCCCCccEEEeccccCCChhHHHHHH-HHHHHhccCCeEEEEEcCCCc
Q 021008 178 FFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVI-DHLAKYMAPGALLMLRSAHGA 235 (318)
Q Consensus 178 ~f~~gDa~~l~~~l~~fD~V~~aalvgm~~~~k~~vl-~~l~r~LkpGg~lv~r~~~g~ 235 (318)
+ ..+..+ .+...|+|++.. + .+ .++ .+..+.||||++| +.-++|-
T Consensus 265 ~--v~~Lee---al~~ADIVi~at--g----t~-~lI~~e~l~~MK~gail-INvgrg~ 310 (435)
T 3gvp_A 265 R--LVKLNE---VIRQVDIVITCT--G----NK-NVVTREHLDRMKNSCIV-CNMGHSN 310 (435)
T ss_dssp E--ECCHHH---HTTTCSEEEECS--S----CS-CSBCHHHHHHSCTTEEE-EECSSTT
T ss_pred E--eccHHH---HHhcCCEEEECC--C----Cc-ccCCHHHHHhcCCCcEE-EEecCCC
Confidence 1 122222 344789998742 1 11 122 2445789999866 4445553
No 418
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.81 E-value=0.019 Score=53.02 Aligned_cols=90 Identities=11% Similarity=0.066 Sum_probs=58.8
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
..+++|+.||+|.+|......++.+ |++|+++|.+++..+.+. . .|. +... ..++...+..+|+|++
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~----~-~g~----~~~~--~~~l~~~l~~aDvVi~ 221 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARIT----E-MGL----VPFH--TDELKEHVKDIDICIN 221 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----H-TTC----EEEE--GGGHHHHSTTCSEEEE
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHH----H-CCC----eEEc--hhhHHHHhhCCCEEEE
Confidence 5789999999999988887777654 899999999997554432 2 232 2221 1223223458999998
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
+.-.++- .+ +..+.||||++++-
T Consensus 222 ~~p~~~i--~~-----~~~~~mk~g~~lin 244 (300)
T 2rir_A 222 TIPSMIL--NQ-----TVLSSMTPKTLILD 244 (300)
T ss_dssp CCSSCCB--CH-----HHHTTSCTTCEEEE
T ss_pred CCChhhh--CH-----HHHHhCCCCCEEEE
Confidence 7644331 11 13478999987643
No 419
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.80 E-value=0.025 Score=55.12 Aligned_cols=102 Identities=18% Similarity=0.139 Sum_probs=62.7
Q ss_pred CEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc--CCCC---------CCCeEEEEccccccCcC
Q 021008 123 TKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSS--DPDL---------STRMFFHTTDIMNVSSA 190 (318)
Q Consensus 123 ~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~--~~gl---------~~ri~f~~gDa~~l~~~ 190 (318)
++|..||+|.+|.+. ..|++ .|.+|+++|+|++.++..++--.. ..++ ..++++ +.|..+.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~---~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~--- 73 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSA---RGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKA--- 73 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHH---
Confidence 479999999988864 44554 388999999999888765541000 0111 124554 2333221
Q ss_pred CCCccEEEeccccCCC------hhHHHHHHHHHHHhccC---CeEEEEEc
Q 021008 191 LKDYEVVFLAALVGMD------KDEKIRVIDHLAKYMAP---GALLMLRS 231 (318)
Q Consensus 191 l~~fD~V~~aalvgm~------~~~k~~vl~~l~r~Lkp---Gg~lv~r~ 231 (318)
....|+|+++---..+ ...-.++++.+.+.++| |.+++..+
T Consensus 74 ~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S 123 (436)
T 1mv8_A 74 VLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS 123 (436)
T ss_dssp HHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS
T ss_pred hccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC
Confidence 2368999977522110 01145688999999999 77776554
No 420
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.76 E-value=0.053 Score=50.87 Aligned_cols=105 Identities=13% Similarity=0.200 Sum_probs=64.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHH-HHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANS-KALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~-~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
+..||..||+|..|.+...+........+++-+|++++..+ .+..+... ..+..++++..++- .++...|+|++
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~v~~~~~----~a~~~aDvVii 78 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDA-QAFTAPKKIYSGEY----SDCKDADLVVI 78 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGG-GGGSCCCEEEECCG----GGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHH-HHhcCCeEEEECCH----HHhCCCCEEEE
Confidence 45799999999988887655443222458999999997665 35555443 22335666665432 23457899998
Q ss_pred ccccCCCh--------hHHHHHHHHHHHhc---cCCeEEEEE
Q 021008 200 AALVGMDK--------DEKIRVIDHLAKYM---APGALLMLR 230 (318)
Q Consensus 200 aalvgm~~--------~~k~~vl~~l~r~L---kpGg~lv~r 230 (318)
.+-++... ..-..++.++.+.+ .|.|.+++-
T Consensus 79 ~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 120 (318)
T 1ez4_A 79 TAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA 120 (318)
T ss_dssp CCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 87552111 01124555555433 799988875
No 421
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.76 E-value=0.037 Score=50.98 Aligned_cols=102 Identities=24% Similarity=0.279 Sum_probs=57.1
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCc--EEEEEeCChHHHH-HHHHHhhcCCCCCCCeEEEEc-cccccCcCCCCcc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTT--CFDNYDIDPSANS-KALSLVSSDPDLSTRMFFHTT-DIMNVSSALKDYE 195 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga--~V~gvDid~~ai~-~Ar~~~~~~~gl~~ri~f~~g-Da~~l~~~l~~fD 195 (318)
..+.||+.||+|.+|.+....... .|. .|+.+|++++..+ .+.++... ..+....++... |. .....+|
T Consensus 5 ~~~mkI~IiGaG~vG~~~a~~l~~--~g~~~~V~l~d~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~----~~~~~aD 77 (319)
T 1lld_A 5 VKPTKLAVIGAGAVGSTLAFAAAQ--RGIAREIVLEDIAKERVEAEVLDMQHG-SSFYPTVSIDGSDDP----EICRDAD 77 (319)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH--TTCCSEEEEECSSHHHHHHHHHHHHHT-GGGSTTCEEEEESCG----GGGTTCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh--CCCCCEEEEEeCChhHHHHHHHHHHhh-hhhcCCeEEEeCCCH----HHhCCCC
Confidence 345799999999887765443322 355 8999999986655 22222111 111113344333 32 2335799
Q ss_pred EEEecccc----CCCh--------hHHHHHHHHHHHhccCCeEEEE
Q 021008 196 VVFLAALV----GMDK--------DEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 196 ~V~~aalv----gm~~--------~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
+|+++.-. +++. .....+++.+.+. .|++.++.
T Consensus 78 ~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~ 122 (319)
T 1lld_A 78 MVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYML 122 (319)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEE
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 99987632 1111 1223667777664 78887655
No 422
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=95.75 E-value=0.053 Score=56.77 Aligned_cols=100 Identities=17% Similarity=0.257 Sum_probs=70.6
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcC-------------CCCCCCeEEEEccccccCc
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSD-------------PDLSTRMFFHTTDIMNVSS 189 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~-------------~gl~~ri~f~~gDa~~l~~ 189 (318)
++|..||+|.+|-.-...+.. .|..|+-+|+++++++.+++.+... .....++++. .|..
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~--aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~---- 389 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFAR--VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFS-SSTK---- 389 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEE-SCGG----
T ss_pred cEEEEEcccHHHHHHHHHHHh--CCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhccc-CcHH----
Confidence 699999999876543333322 5999999999999999887655320 1122344442 2222
Q ss_pred CCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 190 ALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 190 ~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
++...|+|+=+. + -+.+-|.++++++-++++|+.+|..++
T Consensus 390 ~l~~aDlVIEAV-~-E~l~iK~~vf~~le~~~~~~aIlASNT 429 (742)
T 3zwc_A 390 ELSTVDLVVEAV-F-EDMNLKKKVFAELSALCKPGAFLCTNT 429 (742)
T ss_dssp GGGSCSEEEECC-C-SCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred HHhhCCEEEEec-c-ccHHHHHHHHHHHhhcCCCCceEEecC
Confidence 345789888443 2 267999999999999999999998876
No 423
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.74 E-value=0.04 Score=51.22 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=59.8
Q ss_pred CCCCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc--CCCC--CCCeEEEEccccccCcCCCCc
Q 021008 120 RFPTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSS--DPDL--STRMFFHTTDIMNVSSALKDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~--~~gl--~~ri~f~~gDa~~l~~~l~~f 194 (318)
....||+.||+|.+|... ..|++ .|..|+.+ .+++.++..++.-.. ..+. ..++.+ +.|. .....+
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~---~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~~~----~~~~~~ 87 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLAR---AGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSA-SSDP----SAVQGA 87 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHH---TTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEE-ESCG----GGGTTC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHH---CCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeee-eCCH----HHcCCC
Confidence 356799999999877554 33443 47899999 998877766543111 0111 011111 1222 123579
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
|+|+++- +...-..+++.+...++|+..++.-
T Consensus 88 D~vilav----k~~~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 88 DLVLFCV----KSTDTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp SEEEECC----CGGGHHHHHHHHTTTSCTTCEEEEE
T ss_pred CEEEEEc----ccccHHHHHHHHHHhcCCCCEEEEe
Confidence 9999875 3345678899999999998876543
No 424
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.74 E-value=0.033 Score=49.92 Aligned_cols=92 Identities=14% Similarity=0.152 Sum_probs=58.1
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCcE-EEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTTTC-FDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~ga~-V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
..+|..||+|.+|........+ .|.+ |+.+|.+++..+...+ . .| +.+ ..|..++ ....|+|+++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~--~g~~~v~~~~~~~~~~~~~~~---~-~g----~~~-~~~~~~~---~~~~Dvvi~a 75 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYR--KGFRIVQVYSRTEESARELAQ---K-VE----AEY-TTDLAEV---NPYAKLYIVS 75 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSHHHHHHHHH---H-TT----CEE-ESCGGGS---CSCCSEEEEC
T ss_pred CCeEEEEcCCHHHHHHHHHHHH--CCCeEEEEEeCCHHHHHHHHH---H-cC----Cce-eCCHHHH---hcCCCEEEEe
Confidence 4689999999877654322222 2666 8999999977665433 2 22 222 2333332 3478999987
Q ss_pred cccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 201 ALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 201 alvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
. +...-.++++.+.+.++||..++--.
T Consensus 76 v----~~~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 76 L----KDSAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp C----CHHHHHHHHHHHHTTCCTTCEEEECC
T ss_pred c----CHHHHHHHHHHHHhhcCCCcEEEECC
Confidence 6 33344678888888888887665443
No 425
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.73 E-value=0.032 Score=49.06 Aligned_cols=95 Identities=11% Similarity=0.027 Sum_probs=63.4
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCC-CCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC----cCCCCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHL-TTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS----SALKDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~-~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~----~~l~~f 194 (318)
...++|+.+|+|..|.. +|+... .|. |+.+|.|++.++.++ . .+.++.||+.+.. ......
T Consensus 7 ~~~~~viI~G~G~~G~~---la~~L~~~g~-v~vid~~~~~~~~~~----~------~~~~i~gd~~~~~~l~~a~i~~a 72 (234)
T 2aef_A 7 AKSRHVVICGWSESTLE---CLRELRGSEV-FVLAEDENVRKKVLR----S------GANFVHGDPTRVSDLEKANVRGA 72 (234)
T ss_dssp ---CEEEEESCCHHHHH---HHHHSTTSEE-EEEESCGGGHHHHHH----T------TCEEEESCTTCHHHHHHTTCTTC
T ss_pred CCCCEEEEECCChHHHH---HHHHHHhCCe-EEEEECCHHHHHHHh----c------CCeEEEcCCCCHHHHHhcCcchh
Confidence 34579999999865543 444332 367 999999998776553 1 2688999998631 235588
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
|.|+++. +.......+...++.+.|+..++.|-.
T Consensus 73 d~vi~~~----~~d~~n~~~~~~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 73 RAVIVDL----ESDSETIHCILGIRKIDESVRIIAEAE 106 (234)
T ss_dssp SEEEECC----SCHHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred cEEEEcC----CCcHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 9888654 223444556667788999888888763
No 426
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.70 E-value=0.027 Score=51.78 Aligned_cols=93 Identities=15% Similarity=0.213 Sum_probs=58.9
Q ss_pred CCCEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 121 FPTKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
..+||.+||+|.+|.+.. .|++ .|..|+++|++++..+...+ .|. .....+..+ .....|+|++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~-----~g~----~~~~~~~~e---~~~~aDvvi~ 70 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLR---AGLSTWGADLNPQACANLLA-----EGA----CGAAASARE---FAGVVDALVI 70 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHH-----TTC----SEEESSSTT---TTTTCSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH---CCCeEEEEECCHHHHHHHHH-----cCC----ccccCCHHH---HHhcCCEEEE
Confidence 457999999998877643 3443 48899999999987766543 222 111233333 2347899998
Q ss_pred ccccCCChhHHHHHH---HHHHHhccCCeEEEEEc
Q 021008 200 AALVGMDKDEKIRVI---DHLAKYMAPGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~~~k~~vl---~~l~r~LkpGg~lv~r~ 231 (318)
+-- +...-..++ +.+.+.++||.+++-.+
T Consensus 71 ~vp---~~~~~~~v~~~~~~l~~~l~~g~ivv~~s 102 (303)
T 3g0o_A 71 LVV---NAAQVRQVLFGEDGVAHLMKPGSAVMVSS 102 (303)
T ss_dssp CCS---SHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred ECC---CHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence 752 112334455 66778899988876544
No 427
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.68 E-value=0.024 Score=52.62 Aligned_cols=99 Identities=21% Similarity=0.282 Sum_probs=60.3
Q ss_pred CCEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeCChHHHHHHHHHhh-c--CCCCCC--CeEEEEccccccCcCCCCcc
Q 021008 122 PTKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDIDPSANSKALSLVS-S--DPDLST--RMFFHTTDIMNVSSALKDYE 195 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~-~--~~gl~~--ri~f~~gDa~~l~~~l~~fD 195 (318)
..||+.||+|.+|.... .|++ .|..|+.+|.+++..+..++... . ..+... ++.....|..+. ...+|
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D 77 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLAL---KGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---VKDAD 77 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---HTTCS
T ss_pred cCeEEEECCCHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---HhcCC
Confidence 36999999998775532 3443 47899999999987766544311 0 000110 010112222221 24799
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
+|+++. +...-..+++.+.+.+++|..++.-
T Consensus 78 ~vi~~v----~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 78 VILIVV----PAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EEEECS----CGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred EEEEeC----CchHHHHHHHHHHHhCCCCCEEEEc
Confidence 999875 2233467889999999999876655
No 428
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.66 E-value=0.064 Score=50.45 Aligned_cols=103 Identities=21% Similarity=0.259 Sum_probs=64.3
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHH-HHhhc--CCCCCCCeEEEEccccccCcCCCCccE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKAL-SLVSS--DPDLSTRMFFHTTDIMNVSSALKDYEV 196 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar-~~~~~--~~gl~~ri~f~~gDa~~l~~~l~~fD~ 196 (318)
.+.||..||+|.+|.+...+... .|. .|+.+|++++.++... .+... ..+...++++. .|. .++...|+
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~--~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~----~al~~aD~ 85 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQ--KDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NNY----EYLQNSDV 85 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SCG----GGGTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CCH----HHHCCCCE
Confidence 34799999999988875444433 354 7999999998877522 22111 01223456543 443 23457899
Q ss_pred EEecccc----CC--------ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALV----GM--------DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalv----gm--------~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|++++-+ |+ +.+-+.++++.+.+.. |++.+++-+
T Consensus 86 VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~t 131 (328)
T 2hjr_A 86 VIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICIT 131 (328)
T ss_dssp EEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred EEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 9988633 22 1234777888887775 888876643
No 429
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.65 E-value=0.087 Score=49.26 Aligned_cols=107 Identities=13% Similarity=0.212 Sum_probs=62.5
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHH-HHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSK-ALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~-Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
.+.||..||+|..|.+.............|..+|++++..+. +..+.....-++.++++..++. .++...|+|++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~----~a~~~aDvVvi 80 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEY----SDCHDADLVVI 80 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCG----GGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCH----HHhCCCCEEEE
Confidence 467999999999888765544332123589999999865542 3333222011224556654332 23457999998
Q ss_pred ccccCCCh--------hHHHHHHHHHHHhc---cCCeEEEEEc
Q 021008 200 AALVGMDK--------DEKIRVIDHLAKYM---APGALLMLRS 231 (318)
Q Consensus 200 aalvgm~~--------~~k~~vl~~l~r~L---kpGg~lv~r~ 231 (318)
.+-++... ..-..++.++.+.+ .|+|.+++-+
T Consensus 81 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 81 CAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 87653211 11123444444332 8999988843
No 430
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.64 E-value=0.028 Score=55.34 Aligned_cols=104 Identities=21% Similarity=0.254 Sum_probs=64.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc--CCCC-------CCCeEEEEccccccCcC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSS--DPDL-------STRMFFHTTDIMNVSSA 190 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~--~~gl-------~~ri~f~~gDa~~l~~~ 190 (318)
..-++|.+||+|.+|.+...... .|.+|+++|+|++.++..++-... ..++ ..++++. .|..+ .
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La---~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~t-td~~e---a 106 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIA---QNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRAT-TDKHD---A 106 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHH---TTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEE-SCHHH---H
T ss_pred cCCCEEEEECcCHHHHHHHHHHH---cCCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEE-cCHHH---H
Confidence 34469999999988876543332 288999999999988876542100 0000 1345542 33322 2
Q ss_pred CCCccEEEeccccCCC-------hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 191 LKDYEVVFLAALVGMD-------KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 191 l~~fD~V~~aalvgm~-------~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....|+|+++---..+ ...-..+++.+.+ ++||.+++..+
T Consensus 107 ~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~S 153 (432)
T 3pid_A 107 YRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKS 153 (432)
T ss_dssp HTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECS
T ss_pred HhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeC
Confidence 2468999976421111 0134567788888 99999988766
No 431
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.62 E-value=0.031 Score=50.54 Aligned_cols=46 Identities=15% Similarity=0.021 Sum_probs=39.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSS 169 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~ 169 (318)
.++..|||..||. |.|++..++ .|.+++|+|+++.+++.|++.++.
T Consensus 211 ~~~~~vlD~f~Gs-Gtt~~~a~~---~gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 211 NPNDLVLDCFMGS-GTTAIVAKK---LGRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CTTCEEEESSCTT-CHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCC-CHHHHHHHH---cCCeEEEEeCCHHHHHHHHHHHHh
Confidence 6889999999994 777765544 489999999999999999998876
No 432
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.58 E-value=0.016 Score=57.19 Aligned_cols=105 Identities=23% Similarity=0.250 Sum_probs=68.0
Q ss_pred CCCCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc--CCCC---------CCCeEEEEcccccc
Q 021008 120 RFPTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSS--DPDL---------STRMFFHTTDIMNV 187 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~--~~gl---------~~ri~f~~gDa~~l 187 (318)
...-||.+||.|-+|++. .+||+ .|.+|+++|+|++.++.-++-... ..|+ ..++++ +.|..+.
T Consensus 6 ~~~~~~~vIGlG~vG~~~A~~La~---~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea 81 (446)
T 4a7p_A 6 HGSVRIAMIGTGYVGLVSGACFSD---FGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEG 81 (446)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHH
T ss_pred CCceEEEEEcCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHH
Confidence 345799999999887764 56665 388999999999887765442100 0121 245555 3343322
Q ss_pred CcCCCCccEEEeccccCCC-------hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 188 SSALKDYEVVFLAALVGMD-------KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 188 ~~~l~~fD~V~~aalvgm~-------~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....|+||++--.+.+ ...-..+++.+.+.|++|.+++..+
T Consensus 82 ---~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S 129 (446)
T 4a7p_A 82 ---VKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS 129 (446)
T ss_dssp ---HTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS
T ss_pred ---HhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 2368999976321111 1135678899999999999888876
No 433
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.54 E-value=0.024 Score=56.10 Aligned_cols=104 Identities=18% Similarity=0.291 Sum_probs=64.8
Q ss_pred CEEEEEccCCChHH-HHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc--CCCC--------CCCeEEEEccccccCcCC
Q 021008 123 TKIAFIGSGPLPLT-SIVLAINHLTTTCFDNYDIDPSANSKALSLVSS--DPDL--------STRMFFHTTDIMNVSSAL 191 (318)
Q Consensus 123 ~rVL~IGsGplp~t-ai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~--~~gl--------~~ri~f~~gDa~~l~~~l 191 (318)
++|.+||+|.+|.+ +..||+. .+|.+|+++|+|++.++..++-... ..|+ ..++++ +.|..+ ..
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~-g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~---~~ 84 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHK-CPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPK---AI 84 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHH-CTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHH---HH
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHH---Hh
Confidence 69999999998876 4556653 2478999999999887765431000 0111 123444 223222 12
Q ss_pred CCccEEEeccccCC-----------ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 192 KDYEVVFLAALVGM-----------DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 192 ~~fD~V~~aalvgm-----------~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
...|+|+++.--+. +...-..+++.+.+.++||.+++..+
T Consensus 85 ~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 135 (481)
T 2o3j_A 85 AEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS 135 (481)
T ss_dssp HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred hcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 35899998742211 11236778899999999998887654
No 434
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.53 E-value=0.093 Score=49.25 Aligned_cols=103 Identities=18% Similarity=0.170 Sum_probs=64.0
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHHHHHhhc---CCCCCCCeEEEEccccccCcCCCCccE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKALSLVSS---DPDLSTRMFFHTTDIMNVSSALKDYEV 196 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~Ar~~~~~---~~gl~~ri~f~~gDa~~l~~~l~~fD~ 196 (318)
+..||..||+|.+|.+...+... .|. .|+.+|++++.++........ ..+...++++. .|. .++...|+
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~--~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d~----~al~~aD~ 75 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQ--KNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS-NTY----DDLAGADV 75 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE-CCG----GGGTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC-CCH----HHhCCCCE
Confidence 45699999999988875444433 243 699999999877643222221 01223445542 443 23457899
Q ss_pred EEecccc----CCC-------------hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALV----GMD-------------KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalv----gm~-------------~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|++++-+ ++. .+-+.++++.+.+.. |.+.+++-+
T Consensus 76 Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~t 126 (322)
T 1t2d_A 76 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVT 126 (322)
T ss_dssp EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECS
T ss_pred EEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 9988643 221 124677888887775 899876643
No 435
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.52 E-value=0.01 Score=53.05 Aligned_cols=87 Identities=20% Similarity=0.286 Sum_probs=54.7
Q ss_pred CEEEEEccCCChHHHHH-HHHhCCCCc----EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEE
Q 021008 123 TKIAFIGSGPLPLTSIV-LAINHLTTT----CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVV 197 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~-LA~~~~~ga----~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V 197 (318)
+||.+||+|.+|.+-.. |++ .|. .|+.+|++++..+...+ . .| +.+ ..|..++ ....|+|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~---~g~~~~~~V~~~~r~~~~~~~~~~---~-~g----~~~-~~~~~e~---~~~aDvV 67 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMIN---KNIVSSNQIICSDLNTANLKNASE---K-YG----LTT-TTDNNEV---AKNADIL 67 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHH---TTSSCGGGEEEECSCHHHHHHHHH---H-HC----CEE-CSCHHHH---HHHCSEE
T ss_pred CeEEEECccHHHHHHHHHHHh---CCCCCCCeEEEEeCCHHHHHHHHH---H-hC----CEE-eCChHHH---HHhCCEE
Confidence 58999999988765432 333 254 89999999977665533 2 12 221 2222222 2358999
Q ss_pred EeccccCCChhHHHHHHHHHHHhccCCeEEE
Q 021008 198 FLAALVGMDKDEKIRVIDHLAKYMAPGALLM 228 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv 228 (318)
+++- +......+++++.+.++||..++
T Consensus 68 ilav----~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 68 ILSI----KPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp EECS----CTTTHHHHC---CCSSCTTCEEE
T ss_pred EEEe----CHHHHHHHHHHHHhhcCCCCEEE
Confidence 9875 34567889999988899988665
No 436
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.50 E-value=0.099 Score=49.23 Aligned_cols=106 Identities=11% Similarity=0.167 Sum_probs=65.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHH-HHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSK-ALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~-Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
.+..||..||+|..|.+...+........+++-+|++++..+- +..+... ..+..++++..++- .++...|+|+
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~-~~~~~~~~i~~~~~----~a~~~aDvVi 81 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNA-LPFTSPKKIYSAEY----SDAKDADLVV 81 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCG----GGGGGCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHH-HHhcCCeEEEECCH----HHhCCCCEEE
Confidence 5668999999999888876554432124589999999876643 4545443 22335666665432 2345789999
Q ss_pred eccccC----CChhHH----HHHHHHHHHhc---cCCeEEEEE
Q 021008 199 LAALVG----MDKDEK----IRVIDHLAKYM---APGALLMLR 230 (318)
Q Consensus 199 ~aalvg----m~~~~k----~~vl~~l~r~L---kpGg~lv~r 230 (318)
+.+-++ |...+. ..++.++.+.+ .|.|.+++-
T Consensus 82 i~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 124 (326)
T 2zqz_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA 124 (326)
T ss_dssp ECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 887552 211111 14455554433 799988875
No 437
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.44 E-value=0.13 Score=48.44 Aligned_cols=107 Identities=15% Similarity=0.188 Sum_probs=62.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHH-HHHHhhcCCC-CCCCeEEEEccccccCcCCCCccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSK-ALSLVSSDPD-LSTRMFFHTTDIMNVSSALKDYEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~-Ar~~~~~~~g-l~~ri~f~~gDa~~l~~~l~~fD~V 197 (318)
..+.||..||+|.+|.+............+++.+|++++.++- +..+... .. ++.++++..+|.. +....|+|
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~-~~~~~~~v~i~~~~~~----a~~~aDvV 77 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG-KAFAPQPVKTSYGTYE----DCKDADIV 77 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT-GGGSSSCCEEEEECGG----GGTTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc-cccccCCeEEEeCcHH----HhCCCCEE
Confidence 4578999999998888765433322112489999999875442 3333322 11 2245666666543 33478999
Q ss_pred Eecccc----CCChhH----HHHHHHHHHHhc---cCCeEEEEEc
Q 021008 198 FLAALV----GMDKDE----KIRVIDHLAKYM---APGALLMLRS 231 (318)
Q Consensus 198 ~~aalv----gm~~~~----k~~vl~~l~r~L---kpGg~lv~r~ 231 (318)
++.+-+ ||+..+ -.+++.++.+.+ .|.+.+++-+
T Consensus 78 vi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 78 CICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 987644 333222 124444444443 5888776654
No 438
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.43 E-value=0.03 Score=55.89 Aligned_cols=112 Identities=13% Similarity=0.083 Sum_probs=66.3
Q ss_pred hhhHHHhhHHHHHHHhhccc--CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCe
Q 021008 100 YSNYIKLSQLEFNILTQHCS--RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRM 177 (318)
Q Consensus 100 ~~ny~~L~~~E~~~l~~~~~--~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri 177 (318)
|+|..-..+.-...+.+... -.+++|+.+|.|++|......++. .|++|+.+|+++.....+.. .|.
T Consensus 241 fDn~yGt~~sl~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa--~GA~Viv~D~~~~~a~~Aa~-----~g~---- 309 (488)
T 3ond_A 241 FDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQ--AGARVIVTEIDPICALQATM-----EGL---- 309 (488)
T ss_dssp THHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHH-----TTC----
T ss_pred hhhhccccHHHHHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHH-----hCC----
Confidence 45555444444444433322 578999999999888877666665 49999999999976555432 121
Q ss_pred EEEEccccccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcCCC
Q 021008 178 FFHTTDIMNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHG 234 (318)
Q Consensus 178 ~f~~gDa~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~g 234 (318)
++.++......+|+|+...-.. +. +-.+..+.|++|++|+ .-+++
T Consensus 310 -----dv~~lee~~~~aDvVi~atG~~-~v-----l~~e~l~~mk~gaiVv-NaG~~ 354 (488)
T 3ond_A 310 -----QVLTLEDVVSEADIFVTTTGNK-DI-----IMLDHMKKMKNNAIVC-NIGHF 354 (488)
T ss_dssp -----EECCGGGTTTTCSEEEECSSCS-CS-----BCHHHHTTSCTTEEEE-ESSST
T ss_pred -----ccCCHHHHHHhcCEEEeCCCCh-hh-----hhHHHHHhcCCCeEEE-EcCCC
Confidence 1222323334799888543210 11 1122357899998764 44443
No 439
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.43 E-value=0.039 Score=50.51 Aligned_cols=97 Identities=20% Similarity=0.160 Sum_probs=61.0
Q ss_pred CCEEEEEccCCChHHHHH-HHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 122 PTKIAFIGSGPLPLTSIV-LAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~-LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
.+||.+||+|.+|.+-.. |++.-.+...|+.+|++++..+..++ . .| +++ ..|..+. ....|+|+++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~---~-~g----i~~-~~~~~~~---~~~aDvVila 70 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKE---K-CG----VHT-TQDNRQG---ALNADVVVLA 70 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHH---T-TC----CEE-ESCHHHH---HSSCSEEEEC
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHH---H-cC----CEE-eCChHHH---HhcCCeEEEE
Confidence 368999999988765433 33311122289999999976655443 3 23 232 2233222 2368999987
Q ss_pred cccCCChhHHHHHHHHHHHh-ccCCeEEEEEcCCCc
Q 021008 201 ALVGMDKDEKIRVIDHLAKY-MAPGALLMLRSAHGA 235 (318)
Q Consensus 201 alvgm~~~~k~~vl~~l~r~-LkpGg~lv~r~~~g~ 235 (318)
- +......+++++... ++++..++ ....|.
T Consensus 71 v----~p~~~~~vl~~l~~~~l~~~~iii-S~~agi 101 (280)
T 3tri_A 71 V----KPHQIKMVCEELKDILSETKILVI-SLAVGV 101 (280)
T ss_dssp S----CGGGHHHHHHHHHHHHHTTTCEEE-ECCTTC
T ss_pred e----CHHHHHHHHHHHHhhccCCCeEEE-EecCCC
Confidence 6 456788999999988 88776554 333443
No 440
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=95.41 E-value=0.017 Score=55.01 Aligned_cols=92 Identities=12% Similarity=0.130 Sum_probs=60.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcC-CCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSA-LKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~-l~~fD~V~ 198 (318)
...++|.+||+|.+|.+-....++ .|.+|+++|.+++..+.+++ .|. .. ..|..++... ....|+|+
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~--~G~~V~~~dr~~~~~~~a~~-----~G~----~~-~~~~~e~~~~a~~~aDlVi 73 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHA--ANHSVFGYNRSRSGAKSAVD-----EGF----DV-SADLEATLQRAAAEDALIV 73 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHH--TTCCEEEECSCHHHHHHHHH-----TTC----CE-ESCHHHHHHHHHHTTCEEE
T ss_pred CCCCEEEEEeecHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHH-----cCC----ee-eCCHHHHHHhcccCCCEEE
Confidence 345799999999888774433333 37899999999988877653 343 11 2333222110 12469999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEE
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLM 228 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv 228 (318)
++. +......+++++... +||.+|+
T Consensus 74 lav----P~~~~~~vl~~l~~~-~~~~iv~ 98 (341)
T 3ktd_A 74 LAV----PMTAIDSLLDAVHTH-APNNGFT 98 (341)
T ss_dssp ECS----CHHHHHHHHHHHHHH-CTTCCEE
T ss_pred EeC----CHHHHHHHHHHHHcc-CCCCEEE
Confidence 876 445677888888775 8886543
No 441
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.39 E-value=0.042 Score=51.81 Aligned_cols=104 Identities=20% Similarity=0.187 Sum_probs=65.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHH-HHH---hhcCCCCCCCeEEEEccccccCcCCCCc
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKA-LSL---VSSDPDLSTRMFFHTTDIMNVSSALKDY 194 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~A-r~~---~~~~~gl~~ri~f~~gDa~~l~~~l~~f 194 (318)
..+.||..||+|..|.+...+... .|. .|+-+|++++.++.. ..+ ... .+...++++. .|..+ .+...
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~--~g~~~V~L~D~~~~~~~~~~~~l~~~~~~-~~~~~~i~~t-~d~~e---a~~~a 79 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCAL--RELADVVLYDVVKGMPEGKALDLSHVTSV-VDTNVSVRAE-YSYEA---ALTGA 79 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSSSHHHHHHHHHHHHHHH-TTCCCCEEEE-CSHHH---HHTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh--CCCCeEEEEECChhHHHHHHHHHHhhhhc-cCCCCEEEEe-CCHHH---HhCCC
Confidence 455799999999988875444332 243 799999999877762 222 112 2344566552 44431 23578
Q ss_pred cEEEeccccC----C-----Ch--------hHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALVG----M-----DK--------DEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalvg----m-----~~--------~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+|++++-++ + .. +-+.++++.+.+.. |.+.+++-+
T Consensus 80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t 132 (331)
T 1pzg_A 80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVT 132 (331)
T ss_dssp SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEc
Confidence 9999887442 2 11 22778888888775 888876543
No 442
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.37 E-value=0.034 Score=51.07 Aligned_cols=91 Identities=19% Similarity=0.294 Sum_probs=60.4
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEecc
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAA 201 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aa 201 (318)
..||.+||+|.+|........+ .|.+|+++|++++.++..++ .| +++ ..|..++ .. .|+|+++-
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~--~G~~V~~~dr~~~~~~~~~~-----~g----~~~-~~~~~~~---~~-aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE--WPGGVTVYDIRIEAMTPLAE-----AG----ATL-ADSVADV---AA-ADLIHITV 78 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT--STTCEEEECSSTTTSHHHHH-----TT----CEE-CSSHHHH---TT-SSEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHH-----CC----CEE-cCCHHHH---Hh-CCEEEEEC
Confidence 4689999999988764332222 37899999999987766543 22 222 2333333 23 89999775
Q ss_pred ccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 202 LVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 202 lvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
- +...-..+++.+.+.++||.+++-.+
T Consensus 79 p---~~~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 79 L---DDAQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp S---SHHHHHHHHHHHHTTCCTTCEEEECS
T ss_pred C---ChHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 2 12344567899999999998876654
No 443
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.35 E-value=0.1 Score=50.89 Aligned_cols=76 Identities=9% Similarity=-0.042 Sum_probs=49.3
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHH-HHHHHHhhcCCCCCCCeEEEEccccccCcCCCC-ccEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSAN-SKALSLVSSDPDLSTRMFFHTTDIMNVSSALKD-YEVV 197 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai-~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~-fD~V 197 (318)
-.+++|++||.|+.|+++..+..+ .|.+|++.|..+... ...+ ..++ . .+++..|.-.+ ..+.. +|+|
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~--~G~~V~~~D~~~~~~~~~~~-~L~~-~----gi~~~~g~~~~--~~~~~~~d~v 76 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAK--LGAIVTVNDGKPFDENPTAQ-SLLE-E----GIKVVCGSHPL--ELLDEDFCYM 76 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHH--TTCEEEEEESSCGGGCHHHH-HHHH-T----TCEEEESCCCG--GGGGSCEEEE
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHh--CCCEEEEEeCCcccCChHHH-HHHh-C----CCEEEECCChH--HhhcCCCCEE
Confidence 357899999999999987666655 499999999965321 1222 2333 2 35676665432 11134 9999
Q ss_pred EeccccCC
Q 021008 198 FLAALVGM 205 (318)
Q Consensus 198 ~~aalvgm 205 (318)
+++.-+..
T Consensus 77 v~spgi~~ 84 (451)
T 3lk7_A 77 IKNPGIPY 84 (451)
T ss_dssp EECTTSCT
T ss_pred EECCcCCC
Confidence 88765543
No 444
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.34 E-value=0.063 Score=49.93 Aligned_cols=93 Identities=16% Similarity=0.239 Sum_probs=59.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
..++|.+||+|.+|........+ .|.+|+++|++++..+... + .| +++ ..+..++ ....|+|+++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~--~G~~V~~~dr~~~~~~~l~---~--~g----~~~-~~~~~e~---~~~aDvVi~~ 94 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE--AGYALQVWNRTPARAASLA---A--LG----ATI-HEQARAA---ARDADIVVSM 94 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH--TTCEEEEECSCHHHHHHHH---T--TT----CEE-ESSHHHH---HTTCSEEEEC
T ss_pred CCCEEEEECccHHHHHHHHHHHh--CCCeEEEEcCCHHHHHHHH---H--CC----CEe-eCCHHHH---HhcCCEEEEE
Confidence 45799999999998764333222 4889999999997665543 2 22 232 2333332 2368999976
Q ss_pred cccCCChhHHHHHHH--HHHHhccCCeEEEEEc
Q 021008 201 ALVGMDKDEKIRVID--HLAKYMAPGALLMLRS 231 (318)
Q Consensus 201 alvgm~~~~k~~vl~--~l~r~LkpGg~lv~r~ 231 (318)
-- +...-..++. .+...++||..++-.+
T Consensus 95 vp---~~~~~~~v~~~~~~~~~l~~~~~vi~~s 124 (320)
T 4dll_A 95 LE---NGAVVQDVLFAQGVAAAMKPGSLFLDMA 124 (320)
T ss_dssp CS---SHHHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred CC---CHHHHHHHHcchhHHhhCCCCCEEEecC
Confidence 52 1234455665 6778899998876654
No 445
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.30 E-value=0.032 Score=57.05 Aligned_cols=110 Identities=18% Similarity=0.176 Sum_probs=72.7
Q ss_pred CCCEEEEEccCCChHHHHHHHHhC------CC---C--cEEEEEeC---ChHHHHHHHH-----------HhhcCC----
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINH------LT---T--TCFDNYDI---DPSANSKALS-----------LVSSDP---- 171 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~------~~---g--a~V~gvDi---d~~ai~~Ar~-----------~~~~~~---- 171 (318)
+.-+||++|-| .|+..+...+.. .| + -+++++|. +++.+.++-+ +.+.-.
T Consensus 66 ~~~~i~e~gfG-~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 144 (676)
T 3ps9_A 66 PLFVVAESGFG-TGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 144 (676)
T ss_dssp SEEEEEEECCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCS
T ss_pred CceEEEEeCCc-hHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCC
Confidence 33599999999 689887665432 01 2 45899999 8877775433 322200
Q ss_pred CC--------CCCeEEEEccccccCcCC-----CCccEEEeccccCC-ChhH-HHHHHHHHHHhccCCeEEEEEc
Q 021008 172 DL--------STRMFFHTTDIMNVSSAL-----KDYEVVFLAALVGM-DKDE-KIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 172 gl--------~~ri~f~~gDa~~l~~~l-----~~fD~V~~aalvgm-~~~~-k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|. .-++++..||+.+....+ ..||++|++++-+- +.+. -.+++..+++.++|||++....
T Consensus 145 ~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 145 GCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred CceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 11 134567889988643333 47999999987521 1111 3679999999999999998765
No 446
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=95.30 E-value=0.034 Score=50.53 Aligned_cols=89 Identities=15% Similarity=0.190 Sum_probs=56.3
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEeccc
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAAL 202 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aal 202 (318)
.+|.+||+|.+|......... .|.+|+.+|.+++..+..++ .| +.+ ..|..++ ....|+|+++.-
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~~~~~~~~~~-----~g----~~~-~~~~~~~---~~~~D~vi~~v~ 70 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK--AGYSLVVSDRNPEAIADVIA-----AG----AET-ASTAKAI---AEQCDVIITMLP 70 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TTCEEEEECSCHHHHHHHHH-----TT----CEE-CSSHHHH---HHHCSEEEECCS
T ss_pred ceEEEECchHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHH-----CC----Cee-cCCHHHH---HhCCCEEEEECC
Confidence 589999999988775433333 37899999999987665433 12 221 2222222 235899997752
Q ss_pred cCCChhHHHHHH---HHHHHhccCCeEEEE
Q 021008 203 VGMDKDEKIRVI---DHLAKYMAPGALLML 229 (318)
Q Consensus 203 vgm~~~~k~~vl---~~l~r~LkpGg~lv~ 229 (318)
+...-..++ +.+.+.++||..++-
T Consensus 71 ---~~~~~~~~~~~~~~l~~~l~~~~~vv~ 97 (299)
T 1vpd_A 71 ---NSPHVKEVALGENGIIEGAKPGTVLID 97 (299)
T ss_dssp ---SHHHHHHHHHSTTCHHHHCCTTCEEEE
T ss_pred ---CHHHHHHHHhCcchHhhcCCCCCEEEE
Confidence 123344566 577788999987754
No 447
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=95.29 E-value=0.013 Score=57.68 Aligned_cols=112 Identities=8% Similarity=0.025 Sum_probs=69.6
Q ss_pred hhhHHHhhHHHHHHHhhccc--CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCe
Q 021008 100 YSNYIKLSQLEFNILTQHCS--RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRM 177 (318)
Q Consensus 100 ~~ny~~L~~~E~~~l~~~~~--~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri 177 (318)
++|+.-..+.-...+.+... -.+++|..||.|.+|......++.+ |++|+++|+++.....|.. .|.
T Consensus 187 ~Dn~~Gt~~slldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~--Ga~Viv~D~~p~~a~~A~~-----~G~---- 255 (436)
T 3h9u_A 187 FDNLYGCRESLVDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGF--GARVVVTEVDPINALQAAM-----EGY---- 255 (436)
T ss_dssp THHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH-----TTC----
T ss_pred hhccccchHHHHHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCChhhhHHHHH-----hCC----
Confidence 56665555444444443322 5789999999999998888888764 9999999999965544432 222
Q ss_pred EEEEccccccCcCCCCccEEEecccc-CCChhHHHHHHHHHHHhccCCeEEEEEcCCCc
Q 021008 178 FFHTTDIMNVSSALKDYEVVFLAALV-GMDKDEKIRVIDHLAKYMAPGALLMLRSAHGA 235 (318)
Q Consensus 178 ~f~~gDa~~l~~~l~~fD~V~~aalv-gm~~~~k~~vl~~l~r~LkpGg~lv~r~~~g~ 235 (318)
++ .+..+ .+...|+|++..-. ++ +=++..+.||||++| ++-++|.
T Consensus 256 ~~--~sL~e---al~~ADVVilt~gt~~i-------I~~e~l~~MK~gAIV-INvgRg~ 301 (436)
T 3h9u_A 256 QV--LLVED---VVEEAHIFVTTTGNDDI-------ITSEHFPRMRDDAIV-CNIGHFD 301 (436)
T ss_dssp EE--CCHHH---HTTTCSEEEECSSCSCS-------BCTTTGGGCCTTEEE-EECSSSG
T ss_pred ee--cCHHH---HHhhCCEEEECCCCcCc-------cCHHHHhhcCCCcEE-EEeCCCC
Confidence 21 23333 34578998864311 11 111345789999766 5555553
No 448
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.28 E-value=0.052 Score=49.58 Aligned_cols=90 Identities=18% Similarity=0.193 Sum_probs=57.2
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEeccc
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAAL 202 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aal 202 (318)
+||.+||+|.+|........+ .|.+|+++|++++..+..++. | +.+ ..|..++ ....|+|+++--
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~--~G~~V~~~d~~~~~~~~~~~~-----g----~~~-~~~~~~~---~~~aDvvi~~vp 68 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLK--AGYLLNVFDLVQSAVDGLVAA-----G----ASA-ARSARDA---VQGADVVISMLP 68 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHH--TTCEEEEECSSHHHHHHHHHT-----T----CEE-CSSHHHH---HTTCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHHHh--CCCeEEEEcCCHHHHHHHHHC-----C----CeE-cCCHHHH---HhCCCeEEEECC
Confidence 689999999988765433223 388999999999876655431 2 222 2222222 236899987651
Q ss_pred cCCChhHHHHHHH---HHHHhccCCeEEEEE
Q 021008 203 VGMDKDEKIRVID---HLAKYMAPGALLMLR 230 (318)
Q Consensus 203 vgm~~~~k~~vl~---~l~r~LkpGg~lv~r 230 (318)
+...-..++. .+.+.++||..++-.
T Consensus 69 ---~~~~~~~v~~~~~~~~~~l~~~~~vi~~ 96 (302)
T 2h78_A 69 ---ASQHVEGLYLDDDGLLAHIAPGTLVLEC 96 (302)
T ss_dssp ---CHHHHHHHHHSSSCGGGSSCSSCEEEEC
T ss_pred ---CHHHHHHHHcCchhHHhcCCCCcEEEEC
Confidence 1233455666 677788888877653
No 449
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=95.27 E-value=0.031 Score=52.15 Aligned_cols=96 Identities=13% Similarity=0.171 Sum_probs=60.3
Q ss_pred CEEEEEccCCChHHHH-HHHHhCCCC-------cEEEEEeCChH-----HHHHHHHHhhc---CCC--CCCCeEEEEccc
Q 021008 123 TKIAFIGSGPLPLTSI-VLAINHLTT-------TCFDNYDIDPS-----ANSKALSLVSS---DPD--LSTRMFFHTTDI 184 (318)
Q Consensus 123 ~rVL~IGsGplp~tai-~LA~~~~~g-------a~V~gvDid~~-----ai~~Ar~~~~~---~~g--l~~ri~f~~gDa 184 (318)
+||.+||+|.+|.+.. .|++. | ..|+.+|++++ ..+..++.-.. ..| +..++.+. .|.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~---g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~ 84 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN---AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAV-PDV 84 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH---HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEE-SSH
T ss_pred CeEEEECCCHHHHHHHHHHHhc---CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEE-cCH
Confidence 5899999998776643 34442 5 78999999987 55544432111 011 22344432 333
Q ss_pred cccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 185 MNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 185 ~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
.+. ...+|+|+++- +......+++++...++||..++.
T Consensus 85 ~~~---~~~aD~Vilav----~~~~~~~v~~~i~~~l~~~~ivv~ 122 (354)
T 1x0v_A 85 VQA---AEDADILIFVV----PHQFIGKICDQLKGHLKANATGIS 122 (354)
T ss_dssp HHH---HTTCSEEEECC----CGGGHHHHHHHHTTCSCTTCEEEE
T ss_pred HHH---HcCCCEEEEeC----CHHHHHHHHHHHHhhCCCCCEEEE
Confidence 221 23689999875 345678899999888988876654
No 450
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=95.27 E-value=0.096 Score=48.84 Aligned_cols=101 Identities=19% Similarity=0.231 Sum_probs=58.3
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCc--EEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTT--CFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga--~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
+||..||+|.+|.+....... .|. .|+.+|++++.++...........+....++...|. ......|+|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~--~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~----~~~~~aDvViia 74 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLM--KGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY----ADLKGSDVVIVA 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG----GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCH----HHhCCCCEEEEc
Confidence 489999999888765433322 254 899999999876653321111000112233333342 234579999988
Q ss_pred cccCC----Ch--------hHHHHHHHHHHHhccCCeEEEEE
Q 021008 201 ALVGM----DK--------DEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 201 alvgm----~~--------~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
.-.+- .. +-+.++++.+.+. .|++.+++-
T Consensus 75 v~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~~ 115 (319)
T 1a5z_A 75 AGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVV 115 (319)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEe
Confidence 75421 11 1245666677666 588877663
No 451
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.23 E-value=0.051 Score=48.94 Aligned_cols=88 Identities=15% Similarity=0.058 Sum_probs=56.1
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEeccc
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAAL 202 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aal 202 (318)
++|.+||+|.+|........ . |.+|+.+|++++..+..++. |. .+. +..+ .....|+|+++.-
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~--~-g~~V~~~~~~~~~~~~~~~~-----g~----~~~--~~~~---~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLA--R-RFPTLVWNRTFEKALRHQEE-----FG----SEA--VPLE---RVAEARVIFTCLP 64 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHH--T-TSCEEEECSSTHHHHHHHHH-----HC----CEE--CCGG---GGGGCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHHh--C-CCeEEEEeCCHHHHHHHHHC-----CC----ccc--CHHH---HHhCCCEEEEeCC
Confidence 37999999998876433322 3 77899999999876655432 21 111 1112 1236899997752
Q ss_pred cCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 203 VGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 203 vgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
+...-..+++++.+.++||..++.-
T Consensus 65 ---~~~~~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 65 ---TTREVYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp ---SHHHHHHHHHHHTTTCCTTEEEEEC
T ss_pred ---ChHHHHHHHHHHHhhCCCCCEEEEC
Confidence 1223455778888889998877643
No 452
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.20 E-value=0.025 Score=52.37 Aligned_cols=97 Identities=10% Similarity=0.085 Sum_probs=54.4
Q ss_pred CEEEEEccCCChHHHHH-HHHhCCCCcEEEEEeCChHHHHHHHHH-hhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 123 TKIAFIGSGPLPLTSIV-LAINHLTTTCFDNYDIDPSANSKALSL-VSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~-LA~~~~~ga~V~gvDid~~ai~~Ar~~-~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
+||+.||+|.+|.+-.. |++ .|..|+.++.++ . +..++. ..- .+.....++..-.+.+-+.....+|+|+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~---~g~~V~~~~r~~-~-~~i~~~g~~~-~~~~g~~~~~~~~~~~~~~~~~~~D~vila 76 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR---SGEDVHFLLRRD-Y-EAIAGNGLKV-FSINGDFTLPHVKGYRAPEEIGPMDLVLVG 76 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH---TSCCEEEECSTT-H-HHHHHTCEEE-EETTCCEEESCCCEESCHHHHCCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHH---CCCeEEEEEcCc-H-HHHHhCCCEE-EcCCCeEEEeeceeecCHHHcCCCCEEEEe
Confidence 58999999998876433 443 378999999987 2 332221 000 001112222000011111123479999987
Q ss_pred cccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 201 ALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 201 alvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
- ....-..+++.+...++|+..++.
T Consensus 77 v----k~~~~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 77 L----KTFANSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp C----CGGGGGGHHHHHGGGCCTTCEEEE
T ss_pred c----CCCCcHHHHHHHHhhcCCCCEEEE
Confidence 5 223344688999999999886654
No 453
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.17 E-value=0.065 Score=50.03 Aligned_cols=102 Identities=18% Similarity=0.254 Sum_probs=60.6
Q ss_pred CCCCEEEEEccCCChH-HHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPL-TSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~-tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
.+..||..||+|.+|. .+..++.+ .....|+-+|+++++...+..+... .. .+++. ++|. .++...|+|+
T Consensus 12 ~~~~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~~~~g~a~dl~~~--~~-~~i~~-t~d~----~~l~~aD~Vi 82 (303)
T 2i6t_A 12 KTVNKITVVGGGELGIACTLAISAK-GIADRLVLLDLSEGTKGATMDLEIF--NL-PNVEI-SKDL----SASAHSKVVI 82 (303)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-----CHHHHHHH--TC-TTEEE-ESCG----GGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCcchHHHHHHHhhh--cC-CCeEE-eCCH----HHHCCCCEEE
Confidence 3457999999996553 23344443 1244899999999766666666543 12 36766 3453 3456899999
Q ss_pred eccccC---C--------ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALVG---M--------DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvg---m--------~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+++-++ | +.+-+.++++.+.+.. |.+.+++-+
T Consensus 83 ~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~s 125 (303)
T 2i6t_A 83 FTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVAS 125 (303)
T ss_dssp ECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECS
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcC
Confidence 887432 1 1234677777777765 899876643
No 454
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.14 E-value=0.087 Score=49.83 Aligned_cols=107 Identities=11% Similarity=0.201 Sum_probs=61.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHH-HHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANS-KALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~-~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..+.||..||+|.+|.+............+++-+|++++..+ .+..+... ..+..++++..+|-.+ ....|+|+
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~-~~~~~~~~i~~~~~~a----~~~aDiVv 81 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDA-LPFTSPKKIYSAEYSD----AKDADLVV 81 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTT-GGGSCCCEEEECCGGG----GTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhh-hhhcCCcEEEECcHHH----hcCCCEEE
Confidence 677899999999888876544332212348999999987443 34444332 2222456666655433 45789999
Q ss_pred ecccc----CCChhH----HHHHHHHHHHhc---cCCeEEEEEc
Q 021008 199 LAALV----GMDKDE----KIRVIDHLAKYM---APGALLMLRS 231 (318)
Q Consensus 199 ~aalv----gm~~~~----k~~vl~~l~r~L---kpGg~lv~r~ 231 (318)
+.+-+ ||+..+ -..++.++.+.+ .|.+.+++-+
T Consensus 82 i~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt 125 (326)
T 3vku_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp ECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred ECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 87644 332111 123344444433 5888776654
No 455
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.10 E-value=0.08 Score=49.19 Aligned_cols=103 Identities=19% Similarity=0.206 Sum_probs=62.6
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCc-EEEEEeCChHHHHHH-HHHhhc--CCCCCCCeEEEEccccccCcCCCCccE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTT-CFDNYDIDPSANSKA-LSLVSS--DPDLSTRMFFHTTDIMNVSSALKDYEV 196 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga-~V~gvDid~~ai~~A-r~~~~~--~~gl~~ri~f~~gDa~~l~~~l~~fD~ 196 (318)
.+.||..||+|.+|.+....... .|. .|+.+|++++.++.. ..+... ..+...++++. .|. ......|+
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~--~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d~----~a~~~aDi 75 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGK--DNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-DDY----ADISGSDV 75 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--HTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-SCG----GGGTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-CCH----HHhCCCCE
Confidence 45799999999887765433322 255 899999999877652 222111 01223455542 343 23457899
Q ss_pred EEeccccC----C--------ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVG----M--------DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvg----m--------~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+++.-++ | +..-+.++++.+.+. .|++.+++-+
T Consensus 76 Vi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~-~~~~iii~~s 121 (317)
T 2ewd_A 76 VIITASIPGRPKDDRSELLFGNARILDSVAEGVKKY-CPNAFVICIT 121 (317)
T ss_dssp EEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEECC
T ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEeC
Confidence 99887331 1 123467788888776 5788776544
No 456
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=95.10 E-value=0.026 Score=52.63 Aligned_cols=93 Identities=12% Similarity=0.158 Sum_probs=66.1
Q ss_pred EEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC----cCCCCccEEEecc
Q 021008 126 AFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS----SALKDYEVVFLAA 201 (318)
Q Consensus 126 L~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~----~~l~~fD~V~~aa 201 (318)
++=|||.+|+.++. .+.+++-+|.++++++.=+++++. ..+++++.+|+.... ..-..||+||++=
T Consensus 98 lfaGSGaLgiEaLS------~~d~~vfvE~~~~a~~~L~~Nl~~----~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP 167 (283)
T 2oo3_A 98 YYPGSPYFAINQLR------SQDRLYLCELHPTEYNFLLKLPHF----NKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP 167 (283)
T ss_dssp EEECHHHHHHHHSC------TTSEEEEECCSHHHHHHHTTSCCT----TSCEEEECSCHHHHHHHHCSCTTSCEEEEECC
T ss_pred EeCCcHHHHHHHcC------CCCeEEEEeCCHHHHHHHHHHhCc----CCcEEEEeCcHHHHHHHhcCCCCCccEEEECC
Confidence 67788755444321 367999999999999988888764 478999999987521 2223699999986
Q ss_pred ccCCChhHHHHHHHHHHH--hccCCeEEEE
Q 021008 202 LVGMDKDEKIRVIDHLAK--YMAPGALLML 229 (318)
Q Consensus 202 lvgm~~~~k~~vl~~l~r--~LkpGg~lv~ 229 (318)
=-.+ +.+..++++.+.+ .+.|+|++++
T Consensus 168 PYe~-k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 168 SYER-KEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp CCCS-TTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCC-CcHHHHHHHHHHHhCccCCCeEEEE
Confidence 2221 3466777777765 5668888865
No 457
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=95.10 E-value=0.037 Score=55.12 Aligned_cols=99 Identities=14% Similarity=0.139 Sum_probs=63.9
Q ss_pred CCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 122 PTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 122 ~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
.++|.+||.|.+|.+. ..|++ .|.+|+++|++++.++...+.-. .+.++.. ..+..++...+...|+|+++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~---~G~~V~v~dr~~~~~~~l~~~g~----~g~~i~~-~~s~~e~v~~l~~aDvVil~ 75 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMND---HGFVVCAFNRTVSKVDDFLANEA----KGTKVVG-AQSLKEMVSKLKKPRRIILL 75 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSTHHHHHHHHTTT----TTSSCEE-CSSHHHHHHTBCSSCEEEEC
T ss_pred CCEEEEEChhHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHhccc----CCCceec-cCCHHHHHhhccCCCEEEEe
Confidence 3689999999988764 33443 38899999999987766543211 1223322 23444443344468999976
Q ss_pred cccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 201 ALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 201 alvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
--. ...-..+++++...|+||.+++--+
T Consensus 76 Vp~---~~~v~~vl~~l~~~L~~g~iIId~s 103 (484)
T 4gwg_A 76 VKA---GQAVDDFIEKLVPLLDTGDIIIDGG 103 (484)
T ss_dssp SCS---SHHHHHHHHHHGGGCCTTCEEEECS
T ss_pred cCC---hHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 421 1344568899999999988765433
No 458
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.07 E-value=0.024 Score=53.42 Aligned_cols=94 Identities=21% Similarity=0.190 Sum_probs=61.4
Q ss_pred CCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHH-HHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 122 PTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSA-NSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~a-i~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
+++|.+||+|.+|.+-....+. .|.+|+.+|.+++. .+.++ . .|. ++. |..+. ....|+|+++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~--~G~~V~~~~~~~~~~~~~a~----~-~G~----~~~--~~~e~---~~~aDvVila 79 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKD--SGVDVTVGLRSGSATVAKAE----A-HGL----KVA--DVKTA---VAAADVVMIL 79 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH--TTCCEEEECCTTCHHHHHHH----H-TTC----EEE--CHHHH---HHTCSEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHH--CcCEEEEEECChHHHHHHHH----H-CCC----EEc--cHHHH---HhcCCEEEEe
Confidence 4689999999887775433333 37789999999754 44443 3 343 222 33332 2368999987
Q ss_pred cccCCChhHHHHHHH-HHHHhccCCeEEEEEcCCCccc
Q 021008 201 ALVGMDKDEKIRVID-HLAKYMAPGALLMLRSAHGARA 237 (318)
Q Consensus 201 alvgm~~~~k~~vl~-~l~r~LkpGg~lv~r~~~g~r~ 237 (318)
. +...-..++. ++...++||..|+. .+|...
T Consensus 80 v----p~~~~~~v~~~~i~~~l~~~~ivi~--~~gv~~ 111 (338)
T 1np3_A 80 T----PDEFQGRLYKEEIEPNLKKGATLAF--AHGFSI 111 (338)
T ss_dssp S----CHHHHHHHHHHHTGGGCCTTCEEEE--SCCHHH
T ss_pred C----CcHHHHHHHHHHHHhhCCCCCEEEE--cCCchh
Confidence 6 3344467887 88889999987763 355543
No 459
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.05 E-value=0.056 Score=53.33 Aligned_cols=101 Identities=18% Similarity=0.248 Sum_probs=62.7
Q ss_pred CEEEEEccCCChHH-HHHHHHhCCCCcEEEEEeCChHHHHHHHHH---hhcCCCC---------CCCeEEEEccccccCc
Q 021008 123 TKIAFIGSGPLPLT-SIVLAINHLTTTCFDNYDIDPSANSKALSL---VSSDPDL---------STRMFFHTTDIMNVSS 189 (318)
Q Consensus 123 ~rVL~IGsGplp~t-ai~LA~~~~~ga~V~gvDid~~ai~~Ar~~---~~~~~gl---------~~ri~f~~gDa~~l~~ 189 (318)
.+|..||.|=.|++ +.++|+. |.+|+|+|+|++.++.=++- +.+ .|+ +.+.+|. .|..+
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~---G~~V~g~Did~~kV~~ln~G~~pi~E-pgl~ell~~~~~~g~l~~t-t~~~~--- 93 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL---GHRVVGYDVNPSIVERLRAGRPHIYE-PGLEEALGRALSSGRLSFA-ESAEE--- 93 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCEEEEECSCHHHHHHHHTTCCSSCC-TTHHHHHHHHHHTTCEEEC-SSHHH---
T ss_pred CEEEEEccCHHHHHHHHHHHhC---CCcEEEEECCHHHHHHHHCCCCCCCC-CCHHHHHHHHHHcCCeeEE-cCHHH---
Confidence 69999999988874 4677763 88999999999988764321 000 111 2455553 22222
Q ss_pred CCCCccEEEeccccCC------ChhHHHHHHHHHHHhccC---CeEEEEEc
Q 021008 190 ALKDYEVVFLAALVGM------DKDEKIRVIDHLAKYMAP---GALLMLRS 231 (318)
Q Consensus 190 ~l~~fD~V~~aalvgm------~~~~k~~vl~~l~r~Lkp---Gg~lv~r~ 231 (318)
.....|++|++--.+. +...-..+.+.+.+.|++ |.++++.+
T Consensus 94 ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eS 144 (444)
T 3vtf_A 94 AVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKS 144 (444)
T ss_dssp HHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECS
T ss_pred HHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 1235788886632111 223345677888888975 45777776
No 460
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.04 E-value=0.13 Score=50.42 Aligned_cols=101 Identities=21% Similarity=0.291 Sum_probs=64.9
Q ss_pred CCCCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc--CCCC---------CCCeEEEEcccccc
Q 021008 120 RFPTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSS--DPDL---------STRMFFHTTDIMNV 187 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~--~~gl---------~~ri~f~~gDa~~l 187 (318)
..+.+.-.||.|-+|++. .+||+ .|.+|+++|+|++.++.-++--.. ..|+ ..+++|-+ |
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~---~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~tt-d---- 80 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAK---HGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVST-T---- 80 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEES-S----
T ss_pred ccCCccEEEeeCHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeC-c----
Confidence 567899999999988864 56665 389999999999988876542100 0121 24566532 3
Q ss_pred CcCCCCccEEEeccccCC--------ChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 188 SSALKDYEVVFLAALVGM--------DKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 188 ~~~l~~fD~V~~aalvgm--------~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....|+||++---+. +...=....+.+.+.|+||.+++..+
T Consensus 81 ---~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~S 129 (431)
T 3ojo_A 81 ---PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVES 129 (431)
T ss_dssp ---CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECS
T ss_pred ---hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 235899887632111 11123556788999999999888776
No 461
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=95.03 E-value=0.039 Score=50.79 Aligned_cols=96 Identities=13% Similarity=0.152 Sum_probs=57.4
Q ss_pred CEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeC--ChHHHHHHHHHhhc-CCCCC-CCeEEEEc-cccccCcCCCCccE
Q 021008 123 TKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDI--DPSANSKALSLVSS-DPDLS-TRMFFHTT-DIMNVSSALKDYEV 196 (318)
Q Consensus 123 ~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDi--d~~ai~~Ar~~~~~-~~gl~-~ri~f~~g-Da~~l~~~l~~fD~ 196 (318)
+||.+||+|.+|.+.. .|++ .|..|+.+|. +++..+..++.-.. ..|.. .++++... |..+ ....+|+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~D~ 74 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVD---NGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEK---CLENAEV 74 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHH---HCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHH---HHTTCSE
T ss_pred CEEEEECcCHHHHHHHHHHHh---CCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHH---HHhcCCE
Confidence 3799999998776532 3443 3779999999 98776654432110 00100 12222210 2212 1247899
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
|+++- +......+++.+.. ++||..++.
T Consensus 75 vi~~v----~~~~~~~v~~~i~~-l~~~~~vv~ 102 (335)
T 1txg_A 75 VLLGV----STDGVLPVMSRILP-YLKDQYIVL 102 (335)
T ss_dssp EEECS----CGGGHHHHHHHHTT-TCCSCEEEE
T ss_pred EEEcC----ChHHHHHHHHHHhc-CCCCCEEEE
Confidence 99875 33466778888988 988876543
No 462
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.95 E-value=0.026 Score=52.04 Aligned_cols=75 Identities=20% Similarity=0.188 Sum_probs=52.3
Q ss_pred CEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEecc
Q 021008 123 TKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAA 201 (318)
Q Consensus 123 ~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aa 201 (318)
++|.+|| +|.+|.+......+ .|..|+++|.+++. +..+ .....|+|+++-
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~--~G~~V~~~~~~~~~-----------------------~~~~---~~~~aDvVilav 73 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA--SGYPISILDREDWA-----------------------VAES---ILANADVVIVSV 73 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT--TTCCEEEECTTCGG-----------------------GHHH---HHTTCSEEEECS
T ss_pred CEEEEEcCCCHHHHHHHHHHHh--CCCeEEEEECCccc-----------------------CHHH---HhcCCCEEEEeC
Confidence 5899999 99887764333332 47799999998751 1111 123689999875
Q ss_pred ccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 202 LVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 202 lvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
+......+++++...++||.+|+.
T Consensus 74 ----p~~~~~~vl~~l~~~l~~~~iv~~ 97 (298)
T 2pv7_A 74 ----PINLTLETIERLKPYLTENMLLAD 97 (298)
T ss_dssp ----CGGGHHHHHHHHGGGCCTTSEEEE
T ss_pred ----CHHHHHHHHHHHHhhcCCCcEEEE
Confidence 445677888999888999886654
No 463
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.93 E-value=0.029 Score=51.10 Aligned_cols=90 Identities=17% Similarity=0.146 Sum_probs=58.5
Q ss_pred CEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEecc
Q 021008 123 TKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAA 201 (318)
Q Consensus 123 ~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aa 201 (318)
+||.+||+|.+|.+.. .|++ .|.+|+++|++++..+...+. | +.+ ..|..++ ....|+|+++-
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~~-----g----~~~-~~~~~~~---~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK---AGCSVTIWNRSPEKAEELAAL-----G----AER-AATPCEV---VESCPVTFAML 65 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSSGGGGHHHHHT-----T----CEE-CSSHHHH---HHHCSEEEECC
T ss_pred CEEEEEeecHHHHHHHHHHHH---CCCeEEEEcCCHHHHHHHHHC-----C----Cee-cCCHHHH---HhcCCEEEEEc
Confidence 6899999998877643 3443 388999999999877665432 2 222 2222222 12579999765
Q ss_pred ccCCChhHHHHHH---HHHHHhccCCeEEEEEc
Q 021008 202 LVGMDKDEKIRVI---DHLAKYMAPGALLMLRS 231 (318)
Q Consensus 202 lvgm~~~~k~~vl---~~l~r~LkpGg~lv~r~ 231 (318)
- +...-..++ +.+.+.++||..++-.+
T Consensus 66 p---~~~~~~~v~~~~~~l~~~l~~~~~vi~~s 95 (287)
T 3pef_A 66 A---DPAAAEEVCFGKHGVLEGIGEGRGYVDMS 95 (287)
T ss_dssp S---SHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred C---CHHHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence 1 123445666 78888999998776544
No 464
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.91 E-value=0.19 Score=44.64 Aligned_cols=66 Identities=8% Similarity=-0.118 Sum_probs=45.7
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEecc
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAA 201 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aa 201 (318)
++||..|+|-+|........ ..|.+|++++.++...+... . .+++++.+|..++. ..++|+|+..+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~----~-----~~~~~~~~D~~d~~--~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALA--PQGWRIIGTSRNPDQMEAIR----A-----SGAEPLLWPGEEPS--LDGVTHLLIST 71 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHG--GGTCEEEEEESCGGGHHHHH----H-----TTEEEEESSSSCCC--CTTCCEEEECC
T ss_pred CcEEEECCcHHHHHHHHHHH--HCCCEEEEEEcChhhhhhHh----h-----CCCeEEEecccccc--cCCCCEEEECC
Confidence 69999998654444322221 13889999999986543321 2 45899999999965 67899888554
No 465
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.90 E-value=0.048 Score=52.63 Aligned_cols=102 Identities=27% Similarity=0.229 Sum_probs=59.6
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhc--CCC-------CCCCeEEEEccccccCcCCCC
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSS--DPD-------LSTRMFFHTTDIMNVSSALKD 193 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~--~~g-------l~~ri~f~~gDa~~l~~~l~~ 193 (318)
++|.+||+|.+|.+..... ..|.+|+++|++++.++..++--.. ..+ ...++++. .|..+ ....
T Consensus 1 MkI~VIG~G~vG~~~A~~L---a~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t-~~~~~---~~~~ 73 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLL---SLQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKAT-LDSKA---AYKE 73 (402)
T ss_dssp CEEEEECCSHHHHHHHHHH---TTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEE-SCHHH---HHHH
T ss_pred CEEEEECCCHHHHHHHHHH---hCCCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEe-CCHHH---HhcC
Confidence 4799999998777643222 1278999999999877654321100 000 01233432 22211 1235
Q ss_pred ccEEEeccccCC-------ChhHHHHHHHHHHHhccCCeEEEEEcC
Q 021008 194 YEVVFLAALVGM-------DKDEKIRVIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 194 fD~V~~aalvgm-------~~~~k~~vl~~l~r~LkpGg~lv~r~~ 232 (318)
.|+|+++---.. +...-..+++.+.+ ++||.+++..+.
T Consensus 74 aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST 118 (402)
T 1dlj_A 74 AELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKST 118 (402)
T ss_dssp CSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSC
T ss_pred CCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCC
Confidence 899998742110 00136778889998 999988887553
No 466
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.90 E-value=0.035 Score=54.66 Aligned_cols=102 Identities=20% Similarity=0.198 Sum_probs=61.6
Q ss_pred CEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHH------------HhhcCCCCCCCeEEEEccccccCc
Q 021008 123 TKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALS------------LVSSDPDLSTRMFFHTTDIMNVSS 189 (318)
Q Consensus 123 ~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~------------~~~~~~gl~~ri~f~~gDa~~l~~ 189 (318)
++|.+||+|.+|.+. ..|++. .+|.+|+++|++++.++..++ ++.. +...++++ +.|..+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~-g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~--~~~~~~~~-t~~~~e~-- 79 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHM-CPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVES--CRGKNLFF-STNIDDA-- 79 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHH-CTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHH--HBTTTEEE-ESCHHHH--
T ss_pred cEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHH--hhcCCEEE-ECCHHHH--
Confidence 689999999988764 445553 247899999999988776432 1110 00123444 2332221
Q ss_pred CCCCccEEEeccccCCC-----------hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 190 ALKDYEVVFLAALVGMD-----------KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 190 ~l~~fD~V~~aalvgm~-----------~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
....|+|+++---+.+ ...-..+++.+.+.++||.+++..+
T Consensus 80 -~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 131 (467)
T 2q3e_A 80 -IKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKS 131 (467)
T ss_dssp -HHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECS
T ss_pred -HhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECC
Confidence 2357999976421111 1113567788889999988776544
No 467
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.86 E-value=0.065 Score=46.78 Aligned_cols=77 Identities=13% Similarity=0.055 Sum_probs=50.2
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
...++|.+||+|.+|.+......+ .|.+|+.+|.+++ .....|+|++
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~--~g~~V~~~~~~~~-------------------------------~~~~aD~vi~ 63 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEI--AGHEVTYYGSKDQ-------------------------------ATTLGEIVIM 63 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHH--TTCEEEEECTTCC-------------------------------CSSCCSEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHH-------------------------------HhccCCEEEE
Confidence 356799999999877664332222 3789999998875 2236899987
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcCCCc
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGA 235 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~g~ 235 (318)
+. +...-..+++++...++ |.. ++.-..|.
T Consensus 64 av----~~~~~~~v~~~l~~~~~-~~~-vi~~~~g~ 93 (209)
T 2raf_A 64 AV----PYPALAALAKQYATQLK-GKI-VVDITNPL 93 (209)
T ss_dssp CS----CHHHHHHHHHHTHHHHT-TSE-EEECCCCB
T ss_pred cC----CcHHHHHHHHHHHHhcC-CCE-EEEECCCC
Confidence 65 33455678888887887 554 44444443
No 468
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=94.73 E-value=0.068 Score=52.74 Aligned_cols=94 Identities=12% Similarity=0.165 Sum_probs=60.3
Q ss_pred CEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEecc
Q 021008 123 TKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAA 201 (318)
Q Consensus 123 ~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aa 201 (318)
.+|.+||+|.+|.... .|++ .|..|+.+|++++..+...+... +.++.. ..|..++...++..|+|+++-
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~---~G~~V~v~dr~~~~~~~l~~~~~-----~~gi~~-~~s~~e~v~~l~~aDvVilav 76 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVES---RGYTVAIYNRTTSKTEEVFKEHQ-----DKNLVF-TKTLEEFVGSLEKPRRIMLMV 76 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHHTT-----TSCEEE-CSSHHHHHHTBCSSCEEEECC
T ss_pred CcEEEEeeHHHHHHHHHHHHh---CCCEEEEEcCCHHHHHHHHHhCc-----CCCeEE-eCCHHHHHhhccCCCEEEEEc
Confidence 5899999998876643 3443 37799999999987766544221 123332 234444333334589999775
Q ss_pred ccCCChhHHHHHHHHHHHhccCCeEEE
Q 021008 202 LVGMDKDEKIRVIDHLAKYMAPGALLM 228 (318)
Q Consensus 202 lvgm~~~~k~~vl~~l~r~LkpGg~lv 228 (318)
- +...-..+++++...++||.+++
T Consensus 77 p---~~~~v~~vl~~l~~~l~~g~iiI 100 (474)
T 2iz1_A 77 Q---AGAATDATIKSLLPLLDIGDILI 100 (474)
T ss_dssp C---TTHHHHHHHHHHGGGCCTTCEEE
T ss_pred c---CchHHHHHHHHHHhhCCCCCEEE
Confidence 2 11244568888999999988655
No 469
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.68 E-value=0.072 Score=47.77 Aligned_cols=105 Identities=9% Similarity=0.065 Sum_probs=60.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
-.+++||.||+|..+...+.+..+ .|+.|+.|+.+.. ...+++... .+++++..+-.+ .++.++|+|+.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~--~GA~VtVvap~~~--~~l~~l~~~-----~~i~~i~~~~~~--~dL~~adLVIa 97 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQ--EGAAITVVAPTVS--AEINEWEAK-----GQLRVKRKKVGE--EDLLNVFFIVV 97 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGG--GCCCEEEECSSCC--HHHHHHHHT-----TSCEEECSCCCG--GGSSSCSEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEECCCCC--HHHHHHHHc-----CCcEEEECCCCH--hHhCCCCEEEE
Confidence 578999999999877766554433 4899999876542 223334443 457777655432 45668999996
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcCC-CcccccccCC
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAH-GARAFLYPVV 243 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~-g~r~~lYP~v 243 (318)
+-- +.+. =..++...+ -|+++-+-.+ ....|..|.+
T Consensus 98 AT~---d~~~----N~~I~~~ak-~gi~VNvvD~p~~~~f~~Pai 134 (223)
T 3dfz_A 98 ATN---DQAV----NKFVKQHIK-NDQLVNMASSFSDGNIQIPAQ 134 (223)
T ss_dssp CCC---CTHH----HHHHHHHSC-TTCEEEC-----CCSEECCEE
T ss_pred CCC---CHHH----HHHHHHHHh-CCCEEEEeCCcccCeEEEeeE
Confidence 541 2222 222344445 4555443333 3445887754
No 470
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.66 E-value=0.063 Score=53.21 Aligned_cols=96 Identities=10% Similarity=0.173 Sum_probs=61.1
Q ss_pred CCCEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 121 FPTKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
..++|.+||+|.+|.+.. .|++ .|.+|+.+|++++.++...+.. .| ..+.. ..|..++...+...|+|++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~---~G~~V~v~~r~~~~~~~l~~~~---~~--~gi~~-~~s~~e~v~~l~~aDvVil 84 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIES---RGYTVSIFNRSREKTEEVIAEN---PG--KKLVP-YYTVKEFVESLETPRRILL 84 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHT---TTCCEEEECSSHHHHHHHHHHS---TT--SCEEE-CSSHHHHHHTBCSSCEEEE
T ss_pred CCCeEEEEccHHHHHHHHHHHHh---CCCeEEEEeCCHHHHHHHHhhC---CC--CCeEE-eCCHHHHHhCCCCCCEEEE
Confidence 457899999998877643 3333 4789999999998776554421 11 23332 2343333333335899997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEE
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLM 228 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv 228 (318)
+--. ...-..+++++...++||.+|+
T Consensus 85 ~Vp~---~~~v~~vl~~l~~~l~~g~iII 110 (480)
T 2zyd_A 85 MVKA---GAGTDAAIDSLKPYLDKGDIII 110 (480)
T ss_dssp CSCS---SSHHHHHHHHHGGGCCTTCEEE
T ss_pred ECCC---HHHHHHHHHHHHhhcCCCCEEE
Confidence 6521 1245678899999999987665
No 471
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.64 E-value=0.15 Score=46.99 Aligned_cols=99 Identities=17% Similarity=0.081 Sum_probs=57.1
Q ss_pred CEEEEEccCCChHHHHH-HHHhCCCC--cEEEEEeCChHHHHHHH-HHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 123 TKIAFIGSGPLPLTSIV-LAINHLTT--TCFDNYDIDPSANSKAL-SLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~-LA~~~~~g--a~V~gvDid~~ai~~Ar-~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
+||..||+|.+|.+... |++. | ..|+.+|++++..+... .+.....-...++++...|. ......|+|+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~---g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~----~~~~~aDvVi 74 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQ---GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW----AALADADVVI 74 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG----GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC---CCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH----HHhCCCCEEE
Confidence 48999999988777533 3332 4 68999999997665433 22111001123455544453 2345799999
Q ss_pred eccccCCC----h------------hHHHHHHHHHHHhccCCeEEEE
Q 021008 199 LAALVGMD----K------------DEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 199 ~aalvgm~----~------------~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
++.-.+.. . +-..++++.+.+. .|++.+++
T Consensus 75 iav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~-~~~~~ii~ 120 (309)
T 1hyh_A 75 STLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES-GFHGVLVV 120 (309)
T ss_dssp ECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHT-TCCSEEEE
T ss_pred EecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEE
Confidence 87643110 0 0124666666654 47787765
No 472
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.57 E-value=0.053 Score=50.31 Aligned_cols=91 Identities=19% Similarity=0.207 Sum_probs=56.8
Q ss_pred CCCEEEEEccCCChHHH-HHHHHhCCCCc-EEEEEeCC--hHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccE
Q 021008 121 FPTKIAFIGSGPLPLTS-IVLAINHLTTT-CFDNYDID--PSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEV 196 (318)
Q Consensus 121 ~~~rVL~IGsGplp~ta-i~LA~~~~~ga-~V~gvDid--~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~ 196 (318)
...+|.+||+|.+|.+. ..|++ .|. .|+++|++ ++..+.+++ .| +.+ ..+..++ ....|+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~---~G~~~V~~~dr~~~~~~~~~~~~-----~g----~~~-~~~~~e~---~~~aDv 86 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQ---AGAIDMAAYDAASAESWRPRAEE-----LG----VSC-KASVAEV---AGECDV 86 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH---HSCCEEEEECSSCHHHHHHHHHH-----TT----CEE-CSCHHHH---HHHCSE
T ss_pred CCCEEEEECccHHHHHHHHHHHH---CCCCeEEEEcCCCCHHHHHHHHH-----CC----CEE-eCCHHHH---HhcCCE
Confidence 34699999999887653 33443 277 99999997 465554432 23 222 2222222 235799
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+++-- ...-.++++.+...++||.+++-.+
T Consensus 87 Vi~~vp----~~~~~~~~~~l~~~l~~~~ivvd~s 117 (312)
T 3qsg_A 87 IFSLVT----AQAALEVAQQAGPHLCEGALYADFT 117 (312)
T ss_dssp EEECSC----TTTHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEEecC----chhHHHHHHhhHhhcCCCCEEEEcC
Confidence 997642 2334457899999999998776443
No 473
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.51 E-value=0.067 Score=50.27 Aligned_cols=95 Identities=12% Similarity=0.168 Sum_probs=59.2
Q ss_pred EEEEEccCCChHHHHH-HHHhCCCCcEEEEEeCChHHHHHHHHHhhc---CCC--CCCCeEEEEccccccCcCCCCccEE
Q 021008 124 KIAFIGSGPLPLTSIV-LAINHLTTTCFDNYDIDPSANSKALSLVSS---DPD--LSTRMFFHTTDIMNVSSALKDYEVV 197 (318)
Q Consensus 124 rVL~IGsGplp~tai~-LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~---~~g--l~~ri~f~~gDa~~l~~~l~~fD~V 197 (318)
||.+||+|.+|.+... |++ .|..|+.+|.+++.++..++.-.. ..| +..++.+. .|..+. ...+|+|
T Consensus 17 kI~iIG~G~mG~~la~~L~~---~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~aDvV 89 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSK---KCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFT-SDVEKA---YNGAEII 89 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTT---TEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEE-SCHHHH---HTTCSSE
T ss_pred eEEEECCCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHHcCcccccccccccccceeee-CCHHHH---HcCCCEE
Confidence 8999999987665322 222 477999999999877766543211 001 12234432 233221 2368999
Q ss_pred EeccccCCChhHHHHHHHH----HHHhccC-CeEEEE
Q 021008 198 FLAALVGMDKDEKIRVIDH----LAKYMAP-GALLML 229 (318)
Q Consensus 198 ~~aalvgm~~~~k~~vl~~----l~r~Lkp-Gg~lv~ 229 (318)
+++- +......++.. +...++| |.+++.
T Consensus 90 ilav----~~~~~~~v~~~~~~gl~~~l~~~~~ivv~ 122 (366)
T 1evy_A 90 LFVI----PTQFLRGFFEKSGGNLIAYAKEKQVPVLV 122 (366)
T ss_dssp EECC----CHHHHHHHHHHHCHHHHHHHHHHTCCEEE
T ss_pred EECC----ChHHHHHHHHHhHHHHHHhcCccCCEEEE
Confidence 9875 34566778888 8888888 776544
No 474
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=94.50 E-value=0.064 Score=53.07 Aligned_cols=98 Identities=12% Similarity=0.143 Sum_probs=59.8
Q ss_pred CEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEecc
Q 021008 123 TKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAA 201 (318)
Q Consensus 123 ~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aa 201 (318)
++|.+||+|.+|.... .|++ .|..|+.+|.+++..+...+.... ...+.++.. ..|..++...+...|+|+++-
T Consensus 2 MkIgVIG~G~mG~~lA~~La~---~G~~V~v~dr~~~~~~~l~~~~g~-~~~~~~i~~-~~~~~e~v~~l~~aDvVilaV 76 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE---KGFKVAVFNRTYSKSEEFMKANAS-APFAGNLKA-FETMEAFAASLKKPRKALILV 76 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHHTTT-STTGGGEEE-CSCHHHHHHHBCSSCEEEECC
T ss_pred CEEEEEChHHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHhcCC-CCCCCCeEE-ECCHHHHHhcccCCCEEEEec
Confidence 4799999998776643 3443 378999999999877665442110 001122332 233333322223589999775
Q ss_pred ccCCChhHHHHHHHHHHHhccCCeEEE
Q 021008 202 LVGMDKDEKIRVIDHLAKYMAPGALLM 228 (318)
Q Consensus 202 lvgm~~~~k~~vl~~l~r~LkpGg~lv 228 (318)
- +...-..+++++...++||.+++
T Consensus 77 p---~~~~v~~vl~~l~~~l~~g~iII 100 (478)
T 1pgj_A 77 Q---AGAATDSTIEQLKKVFEKGDILV 100 (478)
T ss_dssp C---CSHHHHHHHHHHHHHCCTTCEEE
T ss_pred C---ChHHHHHHHHHHHhhCCCCCEEE
Confidence 2 11244668889999999988665
No 475
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=94.49 E-value=0.043 Score=51.60 Aligned_cols=99 Identities=13% Similarity=0.038 Sum_probs=63.2
Q ss_pred cCCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEE---ccccccCcCCCCcc
Q 021008 119 SRFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHT---TDIMNVSSALKDYE 195 (318)
Q Consensus 119 ~~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~---gDa~~l~~~l~~fD 195 (318)
..++++||.+|+|++|+.++.+|+.. .|++|+++|.+++..+.++++ |...-+.+.. ..+.++. .-..+|
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~-~Ga~Vi~~~~~~~~~~~~~~l-----Ga~~vi~~~~~~~~~v~~~~-~g~g~D 256 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVM-TPATVIALDVKEEKLKLAERL-----GADHVVDARRDPVKQVMELT-RGRGVN 256 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESSHHHHHHHHHT-----TCSEEEETTSCHHHHHHHHT-TTCCEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHh-----CCCEEEeccchHHHHHHHHh-CCCCCc
Confidence 46889999999999999999999853 389999999999988888653 3211111100 0111221 112799
Q ss_pred EEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 196 VVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 196 ~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+||-.. | . .....++...+. +||+++.-.
T Consensus 257 vvid~~--G-~--~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 257 VAMDFV--G-S--QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp EEEESS--C-C--HHHHHHGGGGEE--EEEEEEECC
T ss_pred EEEECC--C-C--chHHHHHHHhhc--CCCEEEEEe
Confidence 998544 2 1 111145555554 999988754
No 476
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.48 E-value=0.19 Score=46.61 Aligned_cols=105 Identities=23% Similarity=0.344 Sum_probs=58.0
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHH-HHHHHhhcCCCCCCCeEEE-EccccccCcCCCCccEEEec
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANS-KALSLVSSDPDLSTRMFFH-TTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~-~Ar~~~~~~~gl~~ri~f~-~gDa~~l~~~l~~fD~V~~a 200 (318)
+||..||+|..|.+...+........+|+-+|++++.++ .+..+......+....++. +.| . .++...|+|++.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~---~a~~~aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-Y---SLLKGSEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-G---GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-H---HHhCCCCEEEEC
Confidence 489999999888776543332211238999999998754 2222211100022333443 345 2 234578999988
Q ss_pred ccc----CCChhH----HHHHHHHHHHhc---cCCeEEEEEc
Q 021008 201 ALV----GMDKDE----KIRVIDHLAKYM---APGALLMLRS 231 (318)
Q Consensus 201 alv----gm~~~~----k~~vl~~l~r~L---kpGg~lv~r~ 231 (318)
+-+ ||+..+ -.+++.++.+.+ .|.+.+++-+
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs 118 (294)
T 1oju_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 755 343211 123344433332 6888887765
No 477
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.46 E-value=0.23 Score=44.05 Aligned_cols=107 Identities=10% Similarity=0.065 Sum_probs=70.4
Q ss_pred CCCCEEEEEccCC---ChHH-HHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccC-------
Q 021008 120 RFPTKIAFIGSGP---LPLT-SIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVS------- 188 (318)
Q Consensus 120 ~~~~rVL~IGsGp---lp~t-ai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~------- 188 (318)
-.+++||..|++. +|.. +..|++ .|++|+.++.++...+...++... .+ ..++.++.+|+.+..
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~v~~~~~ 79 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHE---AGARLIFTYAGERLEKSVHELAGT-LD-RNDSIILPCDVTNDAEIETCFA 79 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHHHT-SS-SCCCEEEECCCSSSHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHH---CCCEEEEecCchHHHHHHHHHHHh-cC-CCCceEEeCCCCCHHHHHHHHH
Confidence 3578999999642 3432 344554 499999999998877777777766 33 238999999998732
Q ss_pred ---cCCCCccEEEeccccC-----------CChhHHH-----------HHHHHHHHhccCCeEEEEEc
Q 021008 189 ---SALKDYEVVFLAALVG-----------MDKDEKI-----------RVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 189 ---~~l~~fD~V~~aalvg-----------m~~~~k~-----------~vl~~l~r~LkpGg~lv~r~ 231 (318)
...+..|+++..+-+. ++.++.. .+++.+.+.|+++|.++.-+
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 80 SIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 1123678877554321 2223333 25567778888888887765
No 478
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=94.43 E-value=0.058 Score=51.52 Aligned_cols=94 Identities=20% Similarity=0.125 Sum_probs=58.3
Q ss_pred CEEEEEccCCChHHHHH-HHHhCCCCcEEEEEe---CChHHHHHHHHHhhcCCC-------CCC-------CeEEEEccc
Q 021008 123 TKIAFIGSGPLPLTSIV-LAINHLTTTCFDNYD---IDPSANSKALSLVSSDPD-------LST-------RMFFHTTDI 184 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~-LA~~~~~ga~V~gvD---id~~ai~~Ar~~~~~~~g-------l~~-------ri~f~~gDa 184 (318)
.+|+.||+|.+|.+... |++. .|..|+.+| .+++.++.+.+ . .| .+. ++...+.|.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~--~G~~V~~~~~~~r~~~~~~~~~~---~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASR--DGVEVRVLTLFADEAERWTKALG---A-DELTVIVNEKDGTQTEVKSRPKVITKDP 76 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS--TTEEEEEECCSTTHHHHHHHHHT---T-SCEEEEEECSSSCEEEEEECCSEEESCH
T ss_pred ceEEEECCCHHHHHHHHHHHhC--CCCEEEEEeCCCCcHHHHHHHHh---h-ccceeeeecCCCccceeeccceEEeCCH
Confidence 48999999987665432 3221 388999999 87776665321 1 11 101 111122222
Q ss_pred cccCcCCCCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 185 MNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 185 ~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
.+ ....+|+|+++- +......+++.+...++|+.+|+.
T Consensus 77 ~~---a~~~aD~Vilav----~~~~~~~v~~~l~~~l~~~~ivv~ 114 (404)
T 3c7a_A 77 EI---AISGADVVILTV----PAFAHEGYFQAMAPYVQDSALIVG 114 (404)
T ss_dssp HH---HHTTCSEEEECS----CGGGHHHHHHHHTTTCCTTCEEEE
T ss_pred HH---HhCCCCEEEEeC----chHHHHHHHHHHHhhCCCCcEEEE
Confidence 22 124699999875 345678899999999999887665
No 479
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.39 E-value=0.36 Score=44.74 Aligned_cols=102 Identities=16% Similarity=0.181 Sum_probs=57.2
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHH-HHhhcC--CCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKAL-SLVSSD--PDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar-~~~~~~--~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
+||..||+|.+|.+..........+.+|+.+|++++.++.-. .+.... .+...++++. .|.. ++...|+|++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d~~----~l~~aDvVii 75 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS-NDYA----DTANSDIVII 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE-SCGG----GGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC-CCHH----HHCCCCEEEE
Confidence 489999999988775544433213789999999998766321 111110 0112233332 3432 2457999998
Q ss_pred ccccC----CChh--------HHHHHHHHHHHhccCCeEEEEE
Q 021008 200 AALVG----MDKD--------EKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 200 aalvg----m~~~--------~k~~vl~~l~r~LkpGg~lv~r 230 (318)
+.-.. +... -...+.+.+.+. .|++.+++-
T Consensus 76 av~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~viv~ 117 (310)
T 1guz_A 76 TAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKH-SKNPIIIVV 117 (310)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CSSCEEEEC
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEE
Confidence 76432 2111 113455555555 578876654
No 480
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.38 E-value=0.025 Score=52.90 Aligned_cols=91 Identities=20% Similarity=0.236 Sum_probs=54.1
Q ss_pred CCEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCC---CCeEEE-----EccccccCcCCC
Q 021008 122 PTKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLS---TRMFFH-----TTDIMNVSSALK 192 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~---~ri~f~-----~gDa~~l~~~l~ 192 (318)
.+||+.||+|.+|.+.. .|++ .|..|+.+|.+ +..+..++ .|+. ....+. ..|.. +..
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~---~g~~V~~~~r~-~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~----~~~ 69 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLAL---AGEAINVLARG-ATLQALQT-----AGLRLTEDGATHTLPVRATHDAA----ALG 69 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHH---TTCCEEEECCH-HHHHHHHH-----TCEEEEETTEEEEECCEEESCHH----HHC
T ss_pred CCEEEEECcCHHHHHHHHHHHH---CCCEEEEEECh-HHHHHHHH-----CCCEEecCCCeEEEeeeEECCHH----HcC
Confidence 36899999998776643 3443 37899999996 33333322 1210 111111 11222 234
Q ss_pred CccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 193 DYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 193 ~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
.+|+|+++- +...-..+++.+...++|+..++.
T Consensus 70 ~~D~Vilav----k~~~~~~~~~~l~~~l~~~~~iv~ 102 (335)
T 3ghy_A 70 EQDVVIVAV----KAPALESVAAGIAPLIGPGTCVVV 102 (335)
T ss_dssp CCSEEEECC----CHHHHHHHHGGGSSSCCTTCEEEE
T ss_pred CCCEEEEeC----CchhHHHHHHHHHhhCCCCCEEEE
Confidence 799999875 334555777777778888876653
No 481
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=94.29 E-value=0.2 Score=47.53 Aligned_cols=105 Identities=13% Similarity=0.105 Sum_probs=62.3
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHH-HHHHhhcC-CCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSK-ALSLVSSD-PDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~-Ar~~~~~~-~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
+..||..||+|.+|.+..........-..|+.+|++++..+- +..+.... .....++.. .+|.. +....|+|+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~-t~d~~----~~~daDiVI 94 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS-GKDYS----VSAGSKLVV 94 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE-ESSSC----SCSSCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE-cCCHH----HhCCCCEEE
Confidence 558999999999887765443322112389999999975432 33332210 111223322 33432 356899999
Q ss_pred ecccc----CCC--------hhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 199 LAALV----GMD--------KDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalv----gm~--------~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
+.+-+ ||+ .+-...+...+.+. .|.|.+++-+
T Consensus 95 itaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvt 138 (330)
T 3ldh_A 95 ITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHP 138 (330)
T ss_dssp ECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCC
Confidence 87644 332 23355667777776 8999877754
No 482
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.24 E-value=0.032 Score=50.84 Aligned_cols=102 Identities=13% Similarity=0.098 Sum_probs=54.0
Q ss_pred CCCEEEEEccCCChHHH-HHHHHh-CCC-C-cEEEEEeCChHHHHHHHH-H-hhcCCCCCCCeEEE-EccccccCcCCCC
Q 021008 121 FPTKIAFIGSGPLPLTS-IVLAIN-HLT-T-TCFDNYDIDPSANSKALS-L-VSSDPDLSTRMFFH-TTDIMNVSSALKD 193 (318)
Q Consensus 121 ~~~rVL~IGsGplp~ta-i~LA~~-~~~-g-a~V~gvDid~~ai~~Ar~-~-~~~~~gl~~ri~f~-~gDa~~l~~~l~~ 193 (318)
.+.||++||+|.+|... ..|++. ..+ | ..|+.+|. ++..+..++ . +.. .+.... .+. .-.+.+.......
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 83 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRV-VTPSRD-FLARPTCVTDNPAEVGT 83 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEE-ECSSCE-EEECCSEEESCHHHHCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEE-EeCCCC-eEEecceEecCccccCC
Confidence 44699999999877543 223331 001 6 79999999 654444333 1 100 000000 000 0001111112247
Q ss_pred ccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 194 YEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 194 fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
+|+|+++-- ...-..+++.+...++||..++.
T Consensus 84 ~D~vil~vk----~~~~~~v~~~i~~~l~~~~~iv~ 115 (317)
T 2qyt_A 84 VDYILFCTK----DYDMERGVAEIRPMIGQNTKILP 115 (317)
T ss_dssp EEEEEECCS----SSCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCEEEEecC----cccHHHHHHHHHhhcCCCCEEEE
Confidence 999998742 22346788888888988776654
No 483
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=94.23 E-value=0.055 Score=51.24 Aligned_cols=96 Identities=17% Similarity=0.164 Sum_probs=58.7
Q ss_pred CEEEEEccCCChHHH-HHHHHhCCCC-------cEEEEEeCChH-----HHHHHHHHhhc---CCC--CCCCeEEEEccc
Q 021008 123 TKIAFIGSGPLPLTS-IVLAINHLTT-------TCFDNYDIDPS-----ANSKALSLVSS---DPD--LSTRMFFHTTDI 184 (318)
Q Consensus 123 ~rVL~IGsGplp~ta-i~LA~~~~~g-------a~V~gvDid~~-----ai~~Ar~~~~~---~~g--l~~ri~f~~gDa 184 (318)
+||.+||+|.+|.+. ..|++. | ..|+.+|.+++ ..+.-++.-.. ..| +..++.+. .|.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~---G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~-~~~ 97 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTN---AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAH-SDL 97 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHH---HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEE-SST
T ss_pred CEEEEECcCHHHHHHHHHHHHc---CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEE-CCH
Confidence 589999999877653 334442 5 68999999987 44443321110 011 22344432 232
Q ss_pred cccCcCCCCccEEEeccccCCChhHHHHHHHHHHH----hccCCeEEEE
Q 021008 185 MNVSSALKDYEVVFLAALVGMDKDEKIRVIDHLAK----YMAPGALLML 229 (318)
Q Consensus 185 ~~l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r----~LkpGg~lv~ 229 (318)
.+. ....|+|+++- +.....++++++.. .++||..++.
T Consensus 98 ~ea---~~~aDvVilav----~~~~~~~vl~~i~~~~~~~l~~~~ivvs 139 (375)
T 1yj8_A 98 ASV---INDADLLIFIV----PCQYLESVLASIKESESIKIASHAKAIS 139 (375)
T ss_dssp HHH---HTTCSEEEECC----CHHHHHHHHHHHTC---CCCCTTCEEEE
T ss_pred HHH---HcCCCEEEEcC----CHHHHHHHHHHHhhhhhccCCCCCEEEE
Confidence 221 23689999875 44567788888877 7888876654
No 484
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.23 E-value=0.045 Score=49.75 Aligned_cols=90 Identities=13% Similarity=0.102 Sum_probs=57.0
Q ss_pred CEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEecc
Q 021008 123 TKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLAA 201 (318)
Q Consensus 123 ~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~aa 201 (318)
+||.+||+|.+|.+. ..|++ .|.+|+++|++++..+...+. | +++ ..|..++ ....|+|+++-
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~~-----g----~~~-~~~~~~~---~~~advvi~~v 65 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVR---AGFDVTVWNRNPAKCAPLVAL-----G----ARQ-ASSPAEV---CAACDITIAML 65 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHH---HTCCEEEECSSGGGGHHHHHH-----T----CEE-CSCHHHH---HHHCSEEEECC
T ss_pred CeEEEEccCHHHHHHHHHHHH---CCCeEEEEcCCHHHHHHHHHC-----C----Cee-cCCHHHH---HHcCCEEEEEc
Confidence 479999999998764 33444 278999999999877665432 2 121 2222222 12579998765
Q ss_pred ccCCChhHHHHHH---HHHHHhccCCeEEEEEc
Q 021008 202 LVGMDKDEKIRVI---DHLAKYMAPGALLMLRS 231 (318)
Q Consensus 202 lvgm~~~~k~~vl---~~l~r~LkpGg~lv~r~ 231 (318)
- +...-..++ +.+.+.++||..++-.+
T Consensus 66 ~---~~~~~~~v~~~~~~l~~~l~~g~~vv~~s 95 (287)
T 3pdu_A 66 A---DPAAAREVCFGANGVLEGIGGGRGYIDMS 95 (287)
T ss_dssp S---SHHHHHHHHHSTTCGGGTCCTTCEEEECS
T ss_pred C---CHHHHHHHHcCchhhhhcccCCCEEEECC
Confidence 2 122334566 67778888988776544
No 485
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.17 E-value=0.08 Score=49.22 Aligned_cols=88 Identities=15% Similarity=0.179 Sum_probs=57.1
Q ss_pred CCEEEEEccCCChHHHH-HHHHhCCCC----cEEEEEeCChH--HHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCc
Q 021008 122 PTKIAFIGSGPLPLTSI-VLAINHLTT----TCFDNYDIDPS--ANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDY 194 (318)
Q Consensus 122 ~~rVL~IGsGplp~tai-~LA~~~~~g----a~V~gvDid~~--ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~f 194 (318)
..+|.+||+|.+|.+.. .|++ .| ..|+.+|.+++ ..+..+ + .| +++ ..|..+. ....
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~---~G~~~~~~V~v~~r~~~~~~~~~l~----~-~G----~~~-~~~~~e~---~~~a 85 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTA---AGVLAAHKIMASSPDMDLATVSALR----K-MG----VKL-TPHNKET---VQHS 85 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHH---TTSSCGGGEEEECSCTTSHHHHHHH----H-HT----CEE-ESCHHHH---HHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHH---CCCCCcceEEEECCCccHHHHHHHH----H-cC----CEE-eCChHHH---hccC
Confidence 46899999998776643 2333 25 68999999985 444433 2 23 232 2232222 2368
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
|+||++- +.....+++.++...++||.+++-
T Consensus 86 DvVilav----~~~~~~~vl~~l~~~l~~~~ivvs 116 (322)
T 2izz_A 86 DVLFLAV----KPHIIPFILDEIGADIEDRHIVVS 116 (322)
T ss_dssp SEEEECS----CGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred CEEEEEe----CHHHHHHHHHHHHhhcCCCCEEEE
Confidence 9999875 345677888899888988876544
No 486
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=94.14 E-value=0.19 Score=46.51 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=53.9
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEE-EeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDN-YDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~g-vDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
....||..||+|.+|...+...+...++.++++ +|.+++..+ ++.+. .|.. . ...|..++.. ....|+|+
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~---~~a~~-~g~~---~-~~~~~~~~l~-~~~~D~V~ 76 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLE---WAKNE-LGVE---T-TYTNYKDMID-TENIDAIF 76 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHH---HHHHT-TCCS---E-EESCHHHHHT-TSCCSEEE
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHH---HHHHH-hCCC---c-ccCCHHHHhc-CCCCCEEE
Confidence 455799999999988764443331237888765 599996543 33444 3431 1 2345555432 23699999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
++.- ...-.++ +.+.|+.|-.+++
T Consensus 77 i~tp----~~~h~~~---~~~al~~G~~v~~ 100 (346)
T 3cea_A 77 IVAP----TPFHPEM---TIYAMNAGLNVFC 100 (346)
T ss_dssp ECSC----GGGHHHH---HHHHHHTTCEEEE
T ss_pred EeCC----hHhHHHH---HHHHHHCCCEEEE
Confidence 7752 1222222 3345666665555
No 487
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=94.12 E-value=0.21 Score=50.11 Aligned_cols=124 Identities=5% Similarity=0.031 Sum_probs=76.5
Q ss_pred hhHHHHHHHhhcccCCCCEEEEEccCCChHHHHHHH--HhCC---------CCcEEEEEeCChHHHHHHHHHhhcCCCCC
Q 021008 106 LSQLEFNILTQHCSRFPTKIAFIGSGPLPLTSIVLA--INHL---------TTTCFDNYDIDPSANSKALSLVSSDPDLS 174 (318)
Q Consensus 106 L~~~E~~~l~~~~~~~~~rVL~IGsGplp~tai~LA--~~~~---------~ga~V~gvDid~~ai~~Ar~~~~~~~gl~ 174 (318)
++++-...+. +.++.+|+|-.||.+|+-.-.+- +++. ....+.|+|+++.+...|+-+..- -|.
T Consensus 205 Vv~lmv~l~~---p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~l-hg~- 279 (530)
T 3ufb_A 205 VVRFMVEVMD---PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLL-HGL- 279 (530)
T ss_dssp HHHHHHHHHC---CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHH-HTC-
T ss_pred HHHHHHHhhc---cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHh-cCC-
Confidence 4454444432 46778999999998877543221 1111 124699999999999999866543 344
Q ss_pred CCeEEEEccccccCcC----CCCccEEEeccccCC--------------C-hhHHHHHHHHHHHhcc-------CCeEEE
Q 021008 175 TRMFFHTTDIMNVSSA----LKDYEVVFLAALVGM--------------D-KDEKIRVIDHLAKYMA-------PGALLM 228 (318)
Q Consensus 175 ~ri~f~~gDa~~l~~~----l~~fD~V~~aalvgm--------------~-~~~k~~vl~~l~r~Lk-------pGg~lv 228 (318)
+.-.+..+|....+.. ...||+|+.-=-.+. . ...-..+++++.+.|| |||+++
T Consensus 280 ~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~a 359 (530)
T 3ufb_A 280 EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAA 359 (530)
T ss_dssp SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEE
T ss_pred ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEE
Confidence 3346778888754321 237999984211110 0 0112357889999997 699887
Q ss_pred EEcCCC
Q 021008 229 LRSAHG 234 (318)
Q Consensus 229 ~r~~~g 234 (318)
+--++|
T Consensus 360 vVlP~g 365 (530)
T 3ufb_A 360 VVVPNG 365 (530)
T ss_dssp EEEEHH
T ss_pred EEecch
Confidence 765444
No 488
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.10 E-value=0.044 Score=50.66 Aligned_cols=93 Identities=12% Similarity=0.077 Sum_probs=58.1
Q ss_pred CCCCEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..-++|.+||+|.+|.+.. .|++ .|..|+++|++++..+...+ .|. ++ ..+..++ ....|+|+
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~---~G~~V~~~dr~~~~~~~l~~-----~g~----~~-~~~~~~~---~~~aDvvi 82 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLK---NGFKVTVWNRTLSKCDELVE-----HGA----SV-CESPAEV---IKKCKYTI 82 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSSGGGGHHHHH-----TTC----EE-CSSHHHH---HHHCSEEE
T ss_pred ccCCEEEEECccHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHH-----CCC----eE-cCCHHHH---HHhCCEEE
Confidence 3447999999998876643 3343 38899999999987766542 232 22 2222222 22579998
Q ss_pred eccccCCChhHHHHHH---HHHHHhccCCeEEEEEc
Q 021008 199 LAALVGMDKDEKIRVI---DHLAKYMAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl---~~l~r~LkpGg~lv~r~ 231 (318)
++-- +...-..++ +.+...+++|.+++--+
T Consensus 83 ~~vp---~~~~~~~v~~~~~~l~~~l~~g~~vv~~s 115 (310)
T 3doj_A 83 AMLS---DPCAALSVVFDKGGVLEQICEGKGYIDMS 115 (310)
T ss_dssp ECCS---SHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred EEcC---CHHHHHHHHhCchhhhhccCCCCEEEECC
Confidence 7641 122334566 66778888988776544
No 489
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.05 E-value=0.038 Score=49.56 Aligned_cols=92 Identities=14% Similarity=0.156 Sum_probs=55.8
Q ss_pred CEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCC-CCC--eEEEEccccccCcCCCCccEEE
Q 021008 123 TKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDL-STR--MFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 123 ~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl-~~r--i~f~~gDa~~l~~~l~~fD~V~ 198 (318)
+||.+||+|.+|.... .|++ .|..|+.+|.+++..+ ++... +. +.. ..+...+ +.....+|+|+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~r~~~~~~---~l~~~--~~~~~~~~~~~~~~~----~~~~~~~d~vi 68 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCK---QGHEVQGWLRVPQPYC---SVNLV--ETDGSIFNESLTAND----PDFLATSDLLL 68 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSSCCSEE---EEEEE--CTTSCEEEEEEEESC----HHHHHTCSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHh---CCCCEEEEEcCcccee---eEEEE--cCCCceeeeeeeecC----ccccCCCCEEE
Confidence 4799999998776532 3333 4789999999985432 12111 11 111 1122211 11223699999
Q ss_pred eccccCCChhHHHHHHHHHHHhccCCeEEEEE
Q 021008 199 LAALVGMDKDEKIRVIDHLAKYMAPGALLMLR 230 (318)
Q Consensus 199 ~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r 230 (318)
++- +...-..+++.+...++||..++.-
T Consensus 69 ~~v----~~~~~~~v~~~l~~~l~~~~~vv~~ 96 (291)
T 1ks9_A 69 VTL----KAWQVSDAVKSLASTLPVTTPILLI 96 (291)
T ss_dssp ECS----CGGGHHHHHHHHHTTSCTTSCEEEE
T ss_pred EEe----cHHhHHHHHHHHHhhCCCCCEEEEe
Confidence 875 2334577888999999998876554
No 490
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.02 E-value=0.064 Score=49.72 Aligned_cols=95 Identities=17% Similarity=0.157 Sum_probs=54.8
Q ss_pred CEEEEEccCCChHHHH-HHHHhCCCCcEEEEEeCChHHHHHHHHH-hhcCCCCCCCeEEE----EccccccCcCCCCccE
Q 021008 123 TKIAFIGSGPLPLTSI-VLAINHLTTTCFDNYDIDPSANSKALSL-VSSDPDLSTRMFFH----TTDIMNVSSALKDYEV 196 (318)
Q Consensus 123 ~rVL~IGsGplp~tai-~LA~~~~~ga~V~gvDid~~ai~~Ar~~-~~~~~gl~~ri~f~----~gDa~~l~~~l~~fD~ 196 (318)
.||+.||+|.+|..-. .|++ .|..|+.++.++. +..++. +.-........++. ..|..++ ...+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~---~g~~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~---~~~~Dl 74 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK---TGHCVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAAEL---ETKPDC 74 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH---TTCEEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGGGC---SSCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHh---CCCeEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHHHc---CCCCCE
Confidence 6899999998776543 3443 4789999999872 333322 10000011223331 1222222 127999
Q ss_pred EEeccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 197 VFLAALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 197 V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
|+++-=. ..-..+++.+...++|+..++.
T Consensus 75 VilavK~----~~~~~~l~~l~~~l~~~t~Iv~ 103 (320)
T 3i83_A 75 TLLCIKV----VEGADRVGLLRDAVAPDTGIVL 103 (320)
T ss_dssp EEECCCC----CTTCCHHHHHTTSCCTTCEEEE
T ss_pred EEEecCC----CChHHHHHHHHhhcCCCCEEEE
Confidence 9987421 1223578888999999886654
No 491
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=94.00 E-value=0.24 Score=46.42 Aligned_cols=108 Identities=18% Similarity=0.221 Sum_probs=58.6
Q ss_pred CCCCEEEEEc-cCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEE
Q 021008 120 RFPTKIAFIG-SGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVF 198 (318)
Q Consensus 120 ~~~~rVL~IG-sGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~ 198 (318)
..+.||+.+| +|.+|.+............+|+.+|++++ ...+..+... ....+++.+.+ -.++...+.+.|+|+
T Consensus 6 ~~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~--~~~~~v~~~~~-t~d~~~al~gaDvVi 81 (326)
T 1smk_A 6 APGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHM--DTGAVVRGFLG-QQQLEAALTGMDLII 81 (326)
T ss_dssp --CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTS--CSSCEEEEEES-HHHHHHHHTTCSEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcc--cccceEEEEeC-CCCHHHHcCCCCEEE
Confidence 3567999999 89888887544433211278999999987 3344444432 12224444333 112222345789999
Q ss_pred eccccC----CChhH----HHHHHHHHHHh---ccCCeEEEEEc
Q 021008 199 LAALVG----MDKDE----KIRVIDHLAKY---MAPGALLMLRS 231 (318)
Q Consensus 199 ~aalvg----m~~~~----k~~vl~~l~r~---LkpGg~lv~r~ 231 (318)
+.+-++ ++..+ -..++.++.+. ..|.+.+++-+
T Consensus 82 ~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 82 VPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp ECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 877542 21111 11344444433 35778777743
No 492
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.00 E-value=0.099 Score=52.09 Aligned_cols=98 Identities=15% Similarity=0.144 Sum_probs=62.3
Q ss_pred CCCEEEEEccCCChHHH-HHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 121 FPTKIAFIGSGPLPLTS-IVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 121 ~~~rVL~IGsGplp~ta-i~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
-..+|.+||.|.+|.+. ..|++ .|.+|+++|++++.++...+. . .+ +..+.. +.|..++...+...|+|++
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~---~G~~V~v~dr~~~~~~~l~~~--~-~~-~~gi~~-~~s~~e~v~~l~~aDvVil 80 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAAD---HGFTVCAYNRTQSKVDHFLAN--E-AK-GKSIIG-ATSIEDFISKLKRPRKVML 80 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSSHHHHHHHHT--T-TT-TSSEEC-CSSHHHHHHTSCSSCEEEE
T ss_pred CCCCEEEEeeHHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHcc--c-cc-CCCeEE-eCCHHHHHhcCCCCCEEEE
Confidence 45699999999988764 33444 378999999999877665431 1 11 122332 2333343333345899997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEE
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLML 229 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~ 229 (318)
+-- +...-..+++++...|+||.+|+-
T Consensus 81 ~Vp---~~~~v~~vl~~l~~~l~~g~iIId 107 (497)
T 2p4q_A 81 LVK---AGAPVDALINQIVPLLEKGDIIID 107 (497)
T ss_dssp CCC---SSHHHHHHHHHHGGGCCTTCEEEE
T ss_pred EcC---ChHHHHHHHHHHHHhCCCCCEEEE
Confidence 652 113456788999999999887654
No 493
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.00 E-value=0.12 Score=46.81 Aligned_cols=91 Identities=12% Similarity=0.169 Sum_probs=54.9
Q ss_pred CCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEec
Q 021008 121 FPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFLA 200 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~a 200 (318)
...||.+||+|.+|........+ .|.+|+.+|.+++..+...+ .| +.+ ..+..++ ....|+|+++
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~--~g~~V~~~~~~~~~~~~~~~-----~g----~~~-~~~~~~~---~~~~D~vi~~ 67 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLK--EGVTVYAFDLMEANVAAVVA-----QG----AQA-CENNQKV---AAASDIIFTS 67 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHH--TTCEEEEECSSHHHHHHHHT-----TT----CEE-CSSHHHH---HHHCSEEEEC
T ss_pred CCCEEEEECccHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHH-----CC----Cee-cCCHHHH---HhCCCEEEEE
Confidence 35799999999988764332222 37899999999976654332 12 221 2222222 2258999876
Q ss_pred cccCCChhHHHHHHH---HHHHhccCCeEEEE
Q 021008 201 ALVGMDKDEKIRVID---HLAKYMAPGALLML 229 (318)
Q Consensus 201 alvgm~~~~k~~vl~---~l~r~LkpGg~lv~ 229 (318)
.- ....-..++. ++...++||..++-
T Consensus 68 vp---~~~~~~~v~~~~~~l~~~l~~~~~vv~ 96 (301)
T 3cky_A 68 LP---NAGIVETVMNGPGGVLSACKAGTVIVD 96 (301)
T ss_dssp CS---SHHHHHHHHHSTTCHHHHSCTTCEEEE
T ss_pred CC---CHHHHHHHHcCcchHhhcCCCCCEEEE
Confidence 51 1123345554 67778888886654
No 494
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=93.94 E-value=0.49 Score=45.36 Aligned_cols=67 Identities=12% Similarity=-0.079 Sum_probs=49.5
Q ss_pred CEEEEEccCCChHHHHHHHHhCCCCcE-EEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCc--------CCCC
Q 021008 123 TKIAFIGSGPLPLTSIVLAINHLTTTC-FDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSS--------ALKD 193 (318)
Q Consensus 123 ~rVL~IGsGplp~tai~LA~~~~~ga~-V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~--------~l~~ 193 (318)
.+|+++=||.+|++. -+.+. |.+ |.++|+|+.+++.-+.++.. ..++++|+.++.. ....
T Consensus 3 ~~vidLFsG~GGlsl-G~~~a---G~~~v~avE~d~~a~~t~~~N~~~-------~~~~~~DI~~~~~~~~~~~~~~~~~ 71 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSL-GAARA---GFDVKMAVEIDQHAINTHAINFPR-------SLHVQEDVSLLNAEIIKGFFKNDMP 71 (376)
T ss_dssp CEEEEETCTTSHHHH-HHHHH---TCEEEEEECSCHHHHHHHHHHCTT-------SEEECCCGGGCCHHHHHHHHCSCCC
T ss_pred CeEEEEccCcCHHHH-HHHHC---CCcEEEEEeCCHHHHHHHHHhCCC-------CceEecChhhcCHHHHHhhcccCCC
Confidence 589999999877774 44442 665 56999999999988877643 5678999988642 1247
Q ss_pred ccEEEec
Q 021008 194 YEVVFLA 200 (318)
Q Consensus 194 fD~V~~a 200 (318)
+|+|+..
T Consensus 72 ~D~i~gg 78 (376)
T 3g7u_A 72 IDGIIGG 78 (376)
T ss_dssp CCEEEEC
T ss_pred eeEEEec
Confidence 9999854
No 495
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=93.93 E-value=0.054 Score=50.69 Aligned_cols=95 Identities=11% Similarity=0.065 Sum_probs=56.7
Q ss_pred cCCCCEEEEEcc-CCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEE-Eccccc-cC-cCCCCc
Q 021008 119 SRFPTKIAFIGS-GPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFH-TTDIMN-VS-SALKDY 194 (318)
Q Consensus 119 ~~~~~rVL~IGs-Gplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~-~gDa~~-l~-~~l~~f 194 (318)
..++++||..|+ |++|..++.+|+.. .+++|++++ +++..+.++ .|.. ..+- ..|..+ +. ..-+.+
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~-g~~~V~~~~-~~~~~~~~~------~ga~--~~~~~~~~~~~~~~~~~~~g~ 209 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTV-PNVTVFGTA-STFKHEAIK------DSVT--HLFDRNADYVQEVKRISAEGV 209 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTS-TTCEEEEEE-CGGGHHHHG------GGSS--EEEETTSCHHHHHHHHCTTCE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHc-CCcEEEEeC-CHHHHHHHH------cCCc--EEEcCCccHHHHHHHhcCCCc
Confidence 478899999998 88999999999753 467999998 555545543 1221 1111 111111 10 011379
Q ss_pred cEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 195 EVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 195 D~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
|+||-.. |-+ .++...+.|+|||++++-.
T Consensus 210 Dvv~d~~--g~~------~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 210 DIVLDCL--CGD------NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEEEC--C-------------CTTEEEEEEEEEEC
T ss_pred eEEEECC--Cch------hHHHHHHHhhcCCEEEEEC
Confidence 9998543 211 1356779999999998765
No 496
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.82 E-value=0.078 Score=47.81 Aligned_cols=93 Identities=10% Similarity=0.066 Sum_probs=51.5
Q ss_pred CCCEEEEEccCCChHHHH-HHHHhCCCCc-EEEEEeCCh-------------------HHHHHHHHHhhcCCCCCCCeEE
Q 021008 121 FPTKIAFIGSGPLPLTSI-VLAINHLTTT-CFDNYDIDP-------------------SANSKALSLVSSDPDLSTRMFF 179 (318)
Q Consensus 121 ~~~rVL~IGsGplp~tai-~LA~~~~~ga-~V~gvDid~-------------------~ai~~Ar~~~~~~~gl~~ri~f 179 (318)
..++|+.||+|.+|.... .|++ .|. +|+-+|.|. .-.+.+.+.+.+ ....-+++.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~---~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~~~v~~ 105 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLAS---AGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTR-INPHIAITP 105 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHH---HTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH-HCTTSEEEE
T ss_pred hCCeEEEEeeCHHHHHHHHHHHH---cCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHH-HCCCcEEEE
Confidence 357999999997666543 3443 375 899999996 333444333333 222234555
Q ss_pred EEccccc--cCcCCCCccEEEeccccCCChhHHHHHHHHHHHh
Q 021008 180 HTTDIMN--VSSALKDYEVVFLAALVGMDKDEKIRVIDHLAKY 220 (318)
Q Consensus 180 ~~gDa~~--l~~~l~~fD~V~~aalvgm~~~~k~~vl~~l~r~ 220 (318)
+..+..+ +...+++||+|+.+. - +.+.+..+.+.+.+.
T Consensus 106 ~~~~~~~~~~~~~~~~~DvVi~~~-d--~~~~~~~l~~~~~~~ 145 (249)
T 1jw9_B 106 VNALLDDAELAALIAEHDLVLDCT-D--NVAVRNQLNAGCFAA 145 (249)
T ss_dssp ECSCCCHHHHHHHHHTSSEEEECC-S--SHHHHHHHHHHHHHH
T ss_pred EeccCCHhHHHHHHhCCCEEEEeC-C--CHHHHHHHHHHHHHc
Confidence 5544431 212234799998654 1 334555444444443
No 497
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.71 E-value=0.56 Score=41.83 Aligned_cols=106 Identities=13% Similarity=0.119 Sum_probs=68.7
Q ss_pred CCCCEEEEEccCCChHHH---HHHHHhCCCCcEEEEEeCC------------hHHHHHHHHHhhcCCCCCCCeEEEEccc
Q 021008 120 RFPTKIAFIGSGPLPLTS---IVLAINHLTTTCFDNYDID------------PSANSKALSLVSSDPDLSTRMFFHTTDI 184 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~ta---i~LA~~~~~ga~V~gvDid------------~~ai~~Ar~~~~~~~gl~~ri~f~~gDa 184 (318)
-.+++||..|++ .|+-. ..|++ .|++|+.+|++ .+..+........ .+.++.++.+|+
T Consensus 8 l~gk~vlVTGas-~gIG~~ia~~l~~---~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~ 80 (287)
T 3pxx_A 8 VQDKVVLVTGGA-RGQGRSHAVKLAE---EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK---TGRKAYTAEVDV 80 (287)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH---TTSCEEEEECCT
T ss_pred cCCCEEEEeCCC-ChHHHHHHHHHHH---CCCeEEEEcccccccccccchhhhHHHHHHHHHHHh---cCCceEEEEccC
Confidence 357899999986 34432 33443 49999999998 6666665555555 357899999999
Q ss_pred cccC----------cCCCCccEEEecccc-C----CChhHHHH-----------HHHHHHHhccCCeEEEEEcC
Q 021008 185 MNVS----------SALKDYEVVFLAALV-G----MDKDEKIR-----------VIDHLAKYMAPGALLMLRSA 232 (318)
Q Consensus 185 ~~l~----------~~l~~fD~V~~aalv-g----m~~~~k~~-----------vl~~l~r~LkpGg~lv~r~~ 232 (318)
.+.. ...+..|+++..|-+ . ++.++..+ +.+.+.+.|+++|.++.-+.
T Consensus 81 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 81 RDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 8732 112468988765433 1 23344443 34567778888888877663
No 498
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=93.68 E-value=0.027 Score=66.23 Aligned_cols=104 Identities=17% Similarity=0.187 Sum_probs=0.0
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCC-----cEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEcccccc-CcCCCC
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTT-----TCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNV-SSALKD 193 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~g-----a~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l-~~~l~~ 193 (318)
.+..|||+||.|.++.|...+.. +.+ ...|-.|+|+...+.|++.++. -++..-.-|..+. ++....
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~--l~~~~~~~~~yt~td~s~~~~~~a~~~f~~-----~di~~~~~d~~~~~~~~~~~ 1311 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPAL--LNTQPVMDLDYTATDRNPQALEAAQAKLEQ-----LHVTQGQWDPANPAPGSLGK 1311 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHH--TTTSSSCEEEEEEECSSSSSTTTTTTTHHH-----HTEEEECCCSSCCCC-----
T ss_pred CCCceEEEECCCccHHHHHHHHh--hcccCcccceEEEecCChHHHHHHHHHhhh-----cccccccccccccccCCCCc
Q ss_pred ccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEc
Q 021008 194 YEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRS 231 (318)
Q Consensus 194 fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~ 231 (318)
||+|+....++ ...+..+.+.++++.|||||.+++..
T Consensus 1312 ydlvia~~vl~-~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1312 ADLLVCNCALA-TLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp CCEEEEECC---------------------CCEEEEEE
T ss_pred eeEEEEccccc-ccccHHHHHHHHHHhcCCCcEEEEEe
No 499
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=93.63 E-value=0.17 Score=50.81 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=61.8
Q ss_pred CCC-CEEEEEccCCChHHHHHHHHhC----CCCcEEE-EEeCChHHHHHHHHHhhcCCCCC--CCeEEEEccccccCcCC
Q 021008 120 RFP-TKIAFIGSGPLPLTSIVLAINH----LTTTCFD-NYDIDPSANSKALSLVSSDPDLS--TRMFFHTTDIMNVSSAL 191 (318)
Q Consensus 120 ~~~-~rVL~IGsGplp~tai~LA~~~----~~ga~V~-gvDid~~ai~~Ar~~~~~~~gl~--~ri~f~~gDa~~l~~~l 191 (318)
-.+ ++|.+||+|.+|.+-..-.+.. .+|..|+ +.+.++...+.|++ .|.. ++. ..+..++ .
T Consensus 51 L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e-----~G~~v~d~t---a~s~aEA---a 119 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARA-----AGFTEESGT---LGDIWET---V 119 (525)
T ss_dssp TTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHH-----TTCCTTTTC---EEEHHHH---H
T ss_pred hcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHH-----CCCEEecCC---CCCHHHH---H
Confidence 356 8999999999887754444331 1266655 77766655565543 3432 111 1122222 2
Q ss_pred CCccEEEeccccCCChhHHHHHHHHHHHhccCCeEEEEEcCCCcc
Q 021008 192 KDYEVVFLAALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAHGAR 236 (318)
Q Consensus 192 ~~fD~V~~aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~g~r 236 (318)
...|+|+++- +...-.++++++...|+||.+|+ .++|..
T Consensus 120 ~~ADVVILaV----P~~~~~eVl~eI~p~LK~GaILs--~AaGf~ 158 (525)
T 3fr7_A 120 SGSDLVLLLI----SDAAQADNYEKIFSHMKPNSILG--LSHGFL 158 (525)
T ss_dssp HHCSEEEECS----CHHHHHHHHHHHHHHSCTTCEEE--ESSSHH
T ss_pred hcCCEEEECC----ChHHHHHHHHHHHHhcCCCCeEE--EeCCCC
Confidence 3679999875 44445679999999999999853 456653
No 500
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=93.56 E-value=0.046 Score=52.25 Aligned_cols=96 Identities=14% Similarity=0.091 Sum_probs=59.7
Q ss_pred CCCCEEEEEccCCChHHHHHHHHhCCCCcEEEEEeCChHHHHHHHHHhhcCCCCCCCeEEEEccccccCcCCCCccEEEe
Q 021008 120 RFPTKIAFIGSGPLPLTSIVLAINHLTTTCFDNYDIDPSANSKALSLVSSDPDLSTRMFFHTTDIMNVSSALKDYEVVFL 199 (318)
Q Consensus 120 ~~~~rVL~IGsGplp~tai~LA~~~~~ga~V~gvDid~~ai~~Ar~~~~~~~gl~~ri~f~~gDa~~l~~~l~~fD~V~~ 199 (318)
-.+++|..||.|.+|......++.+ |.+|+++|.++...+.+.+. |. .+. .+..++ +...|+|++
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~~-----g~----~~~-~~l~el---l~~aDvV~l 226 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPF--GCNLLYHDRLQMAPELEKET-----GA----KFV-EDLNEM---LPKCDVIVI 226 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG--CCEEEEECSSCCCHHHHHHH-----CC----EEC-SCHHHH---GGGCSEEEE
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHC--CCEEEEeCCCccCHHHHHhC-----CC----eEc-CCHHHH---HhcCCEEEE
Confidence 5789999999999888876666653 99999999987544444322 21 211 222232 347899997
Q ss_pred ccccCCChhHHHHHHHHHHHhccCCeEEEEEcCC
Q 021008 200 AALVGMDKDEKIRVIDHLAKYMAPGALLMLRSAH 233 (318)
Q Consensus 200 aalvgm~~~~k~~vl~~l~r~LkpGg~lv~r~~~ 233 (318)
..-. +.+.+.-+-++..+.||||++|+ +.+.
T Consensus 227 ~~Pl--t~~t~~li~~~~l~~mk~gailI-N~aR 257 (351)
T 3jtm_A 227 NMPL--TEKTRGMFNKELIGKLKKGVLIV-NNAR 257 (351)
T ss_dssp CSCC--CTTTTTCBSHHHHHHSCTTEEEE-ECSC
T ss_pred CCCC--CHHHHHhhcHHHHhcCCCCCEEE-ECcC
Confidence 6522 22222222245568899988764 4433
Done!