Query 021015
Match_columns 318
No_of_seqs 206 out of 1158
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 11:30:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021015.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021015hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3daa_A D-amino acid aminotrans 100.0 1.1E-50 3.8E-55 378.5 25.7 248 6-317 2-256 (277)
2 3lul_A 4-amino-4-deoxychorisma 100.0 6.7E-49 2.3E-53 365.5 27.7 241 5-318 4-254 (272)
3 1i2k_A 4-amino-4-deoxychorisma 100.0 3.3E-48 1.1E-52 359.7 28.3 242 6-317 1-252 (269)
4 3u0g_A Putative branched-chain 100.0 1.4E-48 4.9E-53 372.3 25.9 251 4-317 28-294 (328)
5 1iye_A Branched-chain amino ac 100.0 2.5E-48 8.5E-53 367.2 25.4 251 5-317 7-273 (309)
6 3sno_A Hypothetical aminotrans 100.0 1.9E-48 6.4E-53 369.6 24.1 249 4-318 14-298 (315)
7 2xpf_A 4-amino-4-deoxychorisma 100.0 1.1E-47 3.7E-52 360.7 28.4 243 4-317 21-273 (292)
8 2eiy_A ILVE, branched-chain am 100.0 2.2E-47 7.4E-52 360.8 27.9 251 5-317 6-271 (308)
9 4dqn_A Putative branched-chain 100.0 1.4E-46 4.7E-51 360.8 23.3 248 8-315 34-302 (345)
10 3csw_A BCAT, putative branched 100.0 1.6E-44 5.5E-49 338.1 21.7 232 8-317 18-255 (285)
11 2a1h_A Branched chain aminotra 100.0 1E-43 3.5E-48 343.3 26.9 260 6-317 46-330 (365)
12 3uzo_A Branched-chain-amino-ac 100.0 6.9E-44 2.4E-48 343.5 22.9 251 8-315 49-317 (358)
13 3dth_A Branched-chain amino ac 100.0 2.4E-43 8.1E-48 341.0 25.6 256 6-315 52-331 (372)
14 2coi_A Branched chain aminotra 100.0 8E-43 2.7E-47 339.2 26.1 258 6-317 66-350 (386)
15 2zgi_A Putative 4-amino-4-deox 100.0 2.2E-43 7.7E-48 323.5 19.6 222 6-316 1-232 (246)
16 3dtg_A Branched-chain amino ac 100.0 3.2E-42 1.1E-46 333.6 23.2 257 7-315 53-331 (372)
17 3qqm_A MLR3007 protein; struct 100.0 1E-39 3.5E-44 295.1 23.7 200 28-312 14-221 (221)
18 3ceb_A D-aminoacid aminotransf 100.0 1.4E-36 4.7E-41 268.8 18.1 192 27-307 2-194 (194)
19 3mcb_B Transcription factor BT 70.8 4.7 0.00016 28.0 3.8 28 204-232 5-41 (58)
20 3lkx_A Transcription factor BT 69.0 4.6 0.00016 28.9 3.5 44 204-269 5-57 (66)
21 2kyr_A Fructose-like phosphotr 35.8 50 0.0017 25.8 4.8 45 260-304 16-70 (111)
22 2r48_A Phosphotransferase syst 25.2 82 0.0028 24.3 4.2 45 260-304 13-67 (106)
23 2r4q_A Phosphotransferase syst 24.0 81 0.0028 24.3 4.0 51 253-304 7-67 (106)
24 2m1z_A LMO0427 protein; homolo 23.7 83 0.0028 24.2 4.0 45 260-304 13-67 (106)
25 2l2q_A PTS system, cellobiose- 22.1 1.6E+02 0.0055 22.0 5.5 54 261-314 14-84 (109)
No 1
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=100.00 E-value=1.1e-50 Score=378.49 Aligned_cols=248 Identities=17% Similarity=0.159 Sum_probs=211.2
Q ss_pred EEEECCeEecCCCCCccccccCC---cceeEeeEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCC
Q 021015 6 IVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEPI 82 (318)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~~ 82 (318)
++|+||+++ +.+++.+++.|++ |||+|||||+++| ++|+|++|++||.+||+.|+|+.
T Consensus 2 ~~~~nG~~~-~~~~~~i~~~d~g~~yGdgvFEtir~~~g--~~f~l~~Hl~RL~~Sa~~l~i~~---------------- 62 (277)
T 3daa_A 2 YTLWNDQIV-KDEEVKIDKEDRGYQFGDGVYEVVKVYNG--EMFTVNEHIDRLYASAEKIRITI---------------- 62 (277)
T ss_dssp EEEETTEEE-EGGGCCBCTTBHHHHTCCEEEEEEEEETT--EETTHHHHHHHHHHHHHHTTCCC----------------
T ss_pred EEEECCEEe-EhHHCeechhhhHHhcccEEEEEEEEECC--EEcCHHHHHHHHHHHHHhcCCCC----------------
Confidence 689999999 9999999999985 9999999999999 99999999999999999999942
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEE-eeCCCCCCccCCCCCCCCcceEEEEEEecCC
Q 021015 83 RTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVS-GDYGKLSGIENMGSDDFLGVFDVSVHFSGYV 161 (318)
Q Consensus 83 ~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~-g~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 161 (318)
+++.+.|++.|+++++. |+..+++||++++ |.+++++..+ .....+++++.+.|++
T Consensus 63 -----~~~~~~l~~~i~~li~~-------------n~~~~~~lri~vtrG~~~r~~~~p-----~~~~~~~~~i~~~p~~ 119 (277)
T 3daa_A 63 -----PYTKDKFHQLLHELVEK-------------NELNTGHIYFQVTRGTSPRAHQFP-----ENTVKPVIIGYTKENP 119 (277)
T ss_dssp -----SSCHHHHHHHHHHHHHH-------------HTCCSEEEEEEEESCBCSCCSSCC-----SSCCCCEEEEEEEECC
T ss_pred -----CCCHHHHHHHHHHHHHh-------------cCCCcEEEEEEEEecCCCcCCCCC-----CCCCCcEEEEEEEECC
Confidence 36899999999999964 3456789999999 5555554442 0134678889889987
Q ss_pred CccccccCCCceEEEecccccCccccccccccchhHHH--hhCCCCCCEEEEeCCCCeEEecCcceEEEEEcCCCCchhh
Q 021015 162 PFVFGVEGTGARLALVGRGRDVAEAKYSDWVRLRKPLE--KLRPPSVTELLLSNDGDQLLEGSITNFFVVCRKDNSEAED 239 (318)
Q Consensus 162 ~~~~~~~~~gv~l~~~~~~r~~~~~k~~~~~~~~~~l~--~a~~~G~de~lL~~~g~~v~Eg~~sNiF~v~~~~~~~~~~ 239 (318)
+.. ..+.+|+++.++...|. ..+..|+.++..++++ +|+++|+||+++.++| +|+||+++|||++++++
T Consensus 120 ~~~-~~~~~gv~~~~~~~~r~-~~~~~Kt~nyl~~~la~~eA~~~g~~e~l~l~~g-~v~E~~~sNif~~~~~~------ 190 (277)
T 3daa_A 120 RPL-ENLEKGVKATFVEDIRW-LRCDIKSLNLLGAVLAKQEAHEKGCYEAILHRNN-TVTEGSSSNVFGIKDGI------ 190 (277)
T ss_dssp CCH-HHHHHCEEEEEEECCCC-SCTTSCBSCCHHHHHHHHHHHHTTCSEEEEEETT-EEEEETTBEEEEEETTE------
T ss_pred CCh-HHHhCCeEEEEecCccc-cCCCcchhhhHHHHHHHHHHHHCCCCEEEEEcCC-EEEEcCceEEEEEECCE------
Confidence 432 23456999988765442 2345567788888776 5788999999544577 99999999999999997
Q ss_pred hhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-EEEEECceec
Q 021015 240 KFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-VVTTIGHKNL 317 (318)
Q Consensus 240 ~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV~~i~~~~~ 317 (318)
|+|||+++++|+||||+.||++|+++|++|+|+.++++||.+|||+|+|||++|| ||++|+++.+
T Consensus 191 -------------l~TP~~~~~iL~GitR~~vl~~~~~~g~~v~e~~i~~~el~~adevf~~ns~~~i~pV~~id~~~~ 256 (277)
T 3daa_A 191 -------------LYTHPANNMILKGITRDVVIACANEINMPVKEIPFTTHEALKMDELFVTSTTSEITPVIEIDGKLI 256 (277)
T ss_dssp -------------EEECCSSTTSCCCHHHHHHHHHHHHTTCCEECCCCBHHHHHTCSEEEEEETTTEEEEEEEETTEES
T ss_pred -------------EECCCCcCCCCccHHHHHHHHHHHHcCCeEEEEeCCHHHHHhcCeeeeecChhhEEEEEEECCEEC
Confidence 9999999999999999999999999999999999999999999999999999999 9999999876
No 2
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=100.00 E-value=6.7e-49 Score=365.49 Aligned_cols=241 Identities=17% Similarity=0.176 Sum_probs=201.6
Q ss_pred cEEEECCeEecCCCCCccccccCC---cceeEeeEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q 021015 5 RIVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEP 81 (318)
Q Consensus 5 ~~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~ 81 (318)
.++|+|| .+++.+++.|++ |||+|||||+++| ++|+|++|++||.+||+.|+|+
T Consensus 4 ~~~~~nG-----~~~a~i~~~d~g~~yG~gvFEtir~~~g--~~~~l~~Hl~RL~~Sa~~l~i~---------------- 60 (272)
T 3lul_A 4 TRVIEDK-----GDMTPSFGIDDRIFLGEGLFETIRVNSS--KPSFAYMHWERLGNSARQLGIP---------------- 60 (272)
T ss_dssp EEECCCC-----C--CCCCCTTBGGGGTCEEEEEEEEETT--EESSHHHHHHHHHHHHHHHTCC----------------
T ss_pred eEEEECC-----ccccccCCccchhhcceEeEEEEEEECC--EeCCHHHHHHHHHHHHHHhCCC----------------
Confidence 3799999 356889999986 9999999999999 9999999999999999999993
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEE-eeCCCCCCccCCCCCCCCcceEEEEEEecC
Q 021015 82 IRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVS-GDYGKLSGIENMGSDDFLGVFDVSVHFSGY 160 (318)
Q Consensus 82 ~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~-g~~~~~~~~~~~g~~~~~~~~~~~v~~~~~ 160 (318)
.+++.+.|.+.|.++++. ++..+++||++++ |.+++++..+ ....+++++. .|+
T Consensus 61 -----~p~~~~~l~~~i~~l~~~-------------~~~~~~~irl~v~rg~~~~g~~~~------~~~~~~~~~~-~p~ 115 (272)
T 3lul_A 61 -----FEISFDDWFEHLIQKIQK-------------DNLYHGGIKAILSGGPASRGLAER------GQVSQLIFQT-FNY 115 (272)
T ss_dssp -----CCCCHHHHHHHHHHHHHH-------------TTCSSEEEEEEEECCBCCSSTTCC------CSSEEEEEEE-ECC
T ss_pred -----CCCCHHHHHHHHHHHHHh-------------cCCCCEEEEEEEEecCCccCcCCC------CCCCcEEEEE-ECC
Confidence 236899999999999963 4567899999999 4455555543 1234666666 565
Q ss_pred CCccccccCCCceEEEecccccC--ccccccccccchhHHH--hhCCCCCCEE-EEeCCCCeEEecCcceEEEEEcCCCC
Q 021015 161 VPFVFGVEGTGARLALVGRGRDV--AEAKYSDWVRLRKPLE--KLRPPSVTEL-LLSNDGDQLLEGSITNFFVVCRKDNS 235 (318)
Q Consensus 161 ~~~~~~~~~~gv~l~~~~~~r~~--~~~k~~~~~~~~~~l~--~a~~~G~de~-lL~~~g~~v~Eg~~sNiF~v~~~~~~ 235 (318)
++.. .++++.+.++.|.. +....|+.++..++++ +|+++|+||+ ++|.+| +|+||+++|||++++|+
T Consensus 116 ~~~~-----~~v~l~~~~~~r~~~~~~~~~Kt~nyl~~~la~~~A~~~G~de~L~ld~~g-~v~E~~~sNif~~~~g~-- 187 (272)
T 3lul_A 116 SIQK-----HPVRLISINWLRDKANPLYQLKSVNYLEAIIAQRQAIAVGADDALFFNTEN-HVTETTCANLFLIENNI-- 187 (272)
T ss_dssp CCCC-----SCEEEEEEEEEECTTCGGGGSCBSCCHHHHHHHHHHHHTTCSEEEEEETTS-BEEEESSCEEEEEETTE--
T ss_pred CCcc-----ccEEEEEEeEEecCCCcccchhhhccHHHHHHHHHHHHcCCCEEEEECCCC-eEEEcCCeEEEEEECCE--
Confidence 4321 24788777777743 3456667777778776 4788999999 566778 99999999999999997
Q ss_pred chhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-EEEEECc
Q 021015 236 EAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-VVTTIGH 314 (318)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV~~i~~ 314 (318)
|+|||+++|+|+||||+.||++|+++|++|+|+.++++||..|||+|+|||++|| ||++||+
T Consensus 188 -----------------l~TP~l~~~iL~GitR~~ll~la~~~g~~v~e~~i~~~el~~adevf~~ns~~~v~PV~~id~ 250 (272)
T 3lul_A 188 -----------------LYTPRVEDGILPGITRARLISHCQQHKMSVQEISLTKKRIEDADAVFLTNSLQGIRRVLSLDN 250 (272)
T ss_dssp -----------------EEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCCBHHHHHTCSEEEEEETTTEEEEEEEETT
T ss_pred -----------------EECCCCccCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEEcCchhEEEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred eecC
Q 021015 315 KNLS 318 (318)
Q Consensus 315 ~~~~ 318 (318)
+.+.
T Consensus 251 ~~~~ 254 (272)
T 3lul_A 251 IIFE 254 (272)
T ss_dssp EECC
T ss_pred EEcc
Confidence 9873
No 3
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=100.00 E-value=3.3e-48 Score=359.67 Aligned_cols=242 Identities=20% Similarity=0.220 Sum_probs=201.9
Q ss_pred EEEECCeEecCCCCCccccccCC---cceeEeeEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCC
Q 021015 6 IVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEPI 82 (318)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~~ 82 (318)
|+|+||+.. +.+++.|++ |||+|||||+++| ++++|++|++||.+||+.|+++
T Consensus 1 m~~~nG~~~-----~~i~~~d~g~~yG~gvfEtir~~~G--~~~~l~~Hl~RL~~Sa~~l~~~----------------- 56 (269)
T 1i2k_A 1 MFLINGHKQ-----ESLAVSDRATQFGDGCFTTARVIDG--KVSLLSAHIQRLQDACQRLMIS----------------- 56 (269)
T ss_dssp CEEETTEEE-----SCCCTTCHHHHHCCEEEEEEEEETT--EETTHHHHHHHHHHHHHHTTCC-----------------
T ss_pred CEEECCCcC-----CccCccccccccceeEEEEEEEECC--EEecHHHHHHHHHHHHHhcCCC-----------------
Confidence 489999943 678999885 9999999999999 8999999999999999999993
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEe-eCCCCCCccCCCCCCCCcceEEEEEEecCC
Q 021015 83 RTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSG-DYGKLSGIENMGSDDFLGVFDVSVHFSGYV 161 (318)
Q Consensus 83 ~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g-~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 161 (318)
.+ +.+.|++.|.++++. + .+++||+++++ .+++++..+ ....+++++.+.|++
T Consensus 57 ----~~-~~~~l~~~i~~~~~~-------------~--~~~~iR~~v~~g~~~~g~~p~------~~~~~~~~i~~~p~~ 110 (269)
T 1i2k_A 57 ----CD-FWPQLEQEMKTLAAE-------------Q--QNGVLKVVISRGSGGRGYSTL------NSGPATRILSVTAYP 110 (269)
T ss_dssp ----CC-CHHHHHHHHHHHHHH-------------H--CSEEEEEEEECCSCCSTTCCT------TCCCCEEEEEEECCC
T ss_pred ----CC-CHHHHHHHHHHHHHh-------------C--CCeEEEEEEEcCCCCCCCCCc------cCCCcEEEEEEEECC
Confidence 22 689999999999853 1 36899999994 445554421 124678888899997
Q ss_pred CccccccCCCceEEEecccccC--ccccccccccchhHHH--hhCCCCCCEE-EEeCCCCeEEecCcceEEEEEcCCCCc
Q 021015 162 PFVFGVEGTGARLALVGRGRDV--AEAKYSDWVRLRKPLE--KLRPPSVTEL-LLSNDGDQLLEGSITNFFVVCRKDNSE 236 (318)
Q Consensus 162 ~~~~~~~~~gv~l~~~~~~r~~--~~~k~~~~~~~~~~l~--~a~~~G~de~-lL~~~g~~v~Eg~~sNiF~v~~~~~~~ 236 (318)
+.....+.+|+++.+.+.+|.. +....|+.++..++++ +|+++|+||+ ++|.+| +|+||+++|||++++|+
T Consensus 111 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~Kt~n~~~~~~a~~~A~~~G~de~l~ld~~G-~v~E~s~sNif~v~~g~--- 186 (269)
T 1i2k_A 111 AHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNADEALVLDSEG-WVTECCAANLFWRKGNV--- 186 (269)
T ss_dssp SHHHHHHHHCEEEEECSCCBCCCTTTTBCCBSCCHHHHHHHHHHTTSSCSEEEEEBTTS-BEEECSSSEEEEEETTE---
T ss_pred CcchhhhcCCeEEEEeceecCCCCcccCcchhhhHHHHHHHHHHHHCCCCEEEEECCCC-cEEEcCceEEEEEECCE---
Confidence 6432223468999887766532 3455667777777766 5889999999 556677 99999999999999997
Q ss_pred hhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-EEEEECce
Q 021015 237 AEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-VVTTIGHK 315 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV~~i~~~ 315 (318)
|+|||+++|+|+||||+.||++|+++|++|+|+.++++||.+|||+|+|||++|| ||++|+++
T Consensus 187 ----------------l~TP~~~~~iL~GitR~~ll~~a~~~g~~v~e~~i~~~eL~~adevfltns~~gv~pV~~id~~ 250 (269)
T 1i2k_A 187 ----------------VYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMPVMPVCACGDV 250 (269)
T ss_dssp ----------------EEEECCSSSSBCCHHHHHHHHHHHHSSSEEEEECCBHHHHHTCSEEEEECSSSCEEEEEEETTE
T ss_pred ----------------EECCCCccCccCCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEcCChhheEEEEEECCE
Confidence 9999999999999999999999999999999999999999999999999999999 99999998
Q ss_pred ec
Q 021015 316 NL 317 (318)
Q Consensus 316 ~~ 317 (318)
.+
T Consensus 251 ~~ 252 (269)
T 1i2k_A 251 SF 252 (269)
T ss_dssp EC
T ss_pred Ee
Confidence 76
No 4
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.4e-48 Score=372.26 Aligned_cols=251 Identities=18% Similarity=0.204 Sum_probs=209.4
Q ss_pred ccEEEECCeEecCCCCCccccccCC---cceeEeeEEEEc---CcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCC
Q 021015 4 TRIVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHN---NGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPS 77 (318)
Q Consensus 4 ~~~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~---g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~ 77 (318)
..++|+||+++ +.+++.++++|++ |||+|||||+++ |..++|+|++|++||.+||+.|+|+.
T Consensus 28 ~~~~w~nG~~v-p~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~----------- 95 (328)
T 3u0g_A 28 DGKIWMDGKLI-EWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDV----------- 95 (328)
T ss_dssp CSEEEETTEEE-EGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCC-----------
T ss_pred CCEEEECCEEe-ehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCC-----------
Confidence 45899999999 9999999999986 999999999998 63468999999999999999999932
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEeeC-CCCCCccCCCCCCCCcceEEEEE
Q 021015 78 GLEPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDY-GKLSGIENMGSDDFLGVFDVSVH 156 (318)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~~-~~~~~~~~~g~~~~~~~~~~~v~ 156 (318)
+++.+.|++.|+++++. |+..+++||++++++. +.++.. ....++++|.
T Consensus 96 ----------p~~~~~l~~~i~~lv~~-------------n~~~~~~iR~~vtrg~~~~g~~p-------~~~~~~~~i~ 145 (328)
T 3u0g_A 96 ----------PFDQETLEAAQRDVVRE-------------NKLESCYLRPIIWIGSEKLGVSA-------KGNTIHVAIA 145 (328)
T ss_dssp ----------SSCHHHHHHHHHHHHHH-------------TTCSSEEEEEEEEECSSCCSTTC-------CCCCEEEEEE
T ss_pred ----------CCCHHHHHHHHHHHHHh-------------cCCCCeEEEEEEEecCCCCCcCC-------CCCCcEEEEE
Confidence 36899999999999963 4557899999999543 333321 1224778888
Q ss_pred EecCCCccc-cccCCCceEEEecccccCc---ccccc-ccccchhHHH--hhCCCCCCEEE-EeCCCCeEEecCcceEEE
Q 021015 157 FSGYVPFVF-GVEGTGARLALVGRGRDVA---EAKYS-DWVRLRKPLE--KLRPPSVTELL-LSNDGDQLLEGSITNFFV 228 (318)
Q Consensus 157 ~~~~~~~~~-~~~~~gv~l~~~~~~r~~~---~~k~~-~~~~~~~~l~--~a~~~G~de~l-L~~~g~~v~Eg~~sNiF~ 228 (318)
+.|+++... ..+.+|+++.++++.|..+ ....| +.++..++++ +|+++|+||+| +|.+| +|+||+++|||+
T Consensus 146 ~~p~~~~~~~~~~~~gv~l~~~~~~R~~~~~~~~~~K~t~nyl~~vla~~eA~~~G~~e~l~ld~~g-~v~E~~~sNif~ 224 (328)
T 3u0g_A 146 AWPWGAYLGEEGLAKGIRVKTSSFTRHHVNVSMVRAKASGWYVNSILANQEATADGYDEALLLDVDG-YVSEGSGENFFL 224 (328)
T ss_dssp EEECC----HHHHHHCEEEEECSSCCCCTTTSCTTSCBGGGHHHHHHHHHHHHHTTCSEEEEECTTS-CEEEESSSEEEE
T ss_pred EEEcCCCCChhhhcCCEEEEEeeeeecCCCCcccchhhhhhhHHHHHHHHHHHHCCCCEEEEECCCC-cEEEcCceeEEE
Confidence 888765322 2234699999988777643 34455 5677777776 58899999994 56677 999999999999
Q ss_pred EEcCCCCchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-
Q 021015 229 VCRKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN- 307 (318)
Q Consensus 229 v~~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi- 307 (318)
+++++ |+|||++. +|+||||+.||++|+++|++|+|+.++++||..|||+|+|||+++|
T Consensus 225 v~~g~-------------------l~TP~~~~-iL~GitR~~vl~~a~~~g~~v~e~~i~~~eL~~adevf~tns~~~v~ 284 (328)
T 3u0g_A 225 VNRGK-------------------LYTPDLAS-CLDGITRDTVITLAKEAGIEVIEKRITRDEVYTADEAFFTGTAAEVT 284 (328)
T ss_dssp EETTE-------------------EEECCSSS-SCCCHHHHHHHHHHHHTTCCEEECCCCHHHHHTCSEEEEEETTTEEE
T ss_pred EECCE-------------------EEeCCccc-cchHHHHHHHHHHHHHcCCeEEEEeCCHHHHhhCCEEEEEcchhhEE
Confidence 99997 99999988 9999999999999999999999999999999999999999999999
Q ss_pred EEEEECceec
Q 021015 308 VVTTIGHKNL 317 (318)
Q Consensus 308 pV~~i~~~~~ 317 (318)
||++|+++.+
T Consensus 285 PV~~Id~~~~ 294 (328)
T 3u0g_A 285 PIRELDNRTI 294 (328)
T ss_dssp EEEEETTEEC
T ss_pred EEEEECCEEC
Confidence 9999999876
No 5
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=100.00 E-value=2.5e-48 Score=367.19 Aligned_cols=251 Identities=18% Similarity=0.187 Sum_probs=207.5
Q ss_pred cEEEECCeEecCCCCCccccccCC---cceeEeeEEEE---cCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 021015 5 RIVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTH---NNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSG 78 (318)
Q Consensus 5 ~~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~---~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~ 78 (318)
.++|+||+++ +.+++.+++.|++ |||+|||||++ +|+ ++|+|++|++||.+||+.|+|+
T Consensus 7 ~~~~~ng~~~-~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~-~~~~l~~Hl~RL~~Sa~~l~~~------------- 71 (309)
T 1iye_A 7 DYIWFNGEMV-RWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFP------------- 71 (309)
T ss_dssp SEEEETTEEE-EGGGCCCCTTCHHHHHCCEEECCEEEECCTTSS-EEETHHHHHHHHHHHHHHHTCC-------------
T ss_pred CeEEECCEEE-EhHHcccCccchHHhccceeEEEEEEEECCCCc-EEcCHHHHHHHHHHHHHHhCCC-------------
Confidence 4899999999 9999999999885 99999999999 653 6999999999999999999993
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEeeC-CCCCCccCCCCCCCCcceEEEEEE
Q 021015 79 LEPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDY-GKLSGIENMGSDDFLGVFDVSVHF 157 (318)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~~-~~~~~~~~~g~~~~~~~~~~~v~~ 157 (318)
.+++.+.|++.+.++++. ++..+++||++++++. ..++..+ ....+++++.+
T Consensus 72 --------~~~~~~~l~~~i~~~~~~-------------~~~~~~~iR~~v~~g~~~~g~~p~------~~~~~~~~i~~ 124 (309)
T 1iye_A 72 --------VSQSIDELMEACRDVIRK-------------NNLTSAYIRPLIFVGDVGMGVNPP------AGYSTDVIIAA 124 (309)
T ss_dssp --------CCSCHHHHHHHHHHHHHH-------------TTCSSEEEEEEEEECSSCSSSSCC------TTCCEEEEEEE
T ss_pred --------CCCCHHHHHHHHHHHHHh-------------cCCCCEEEEEEEEeCCCccCCCCC------CCCCcEEEEEE
Confidence 236899999999999963 3456899999999543 3333211 12357788888
Q ss_pred ecCCCccc-cccCCCceEEEecccccCcc---ccccc-cccchhHHH--hhCCCCCCEEE-EeCCCCeEEecCcceEEEE
Q 021015 158 SGYVPFVF-GVEGTGARLALVGRGRDVAE---AKYSD-WVRLRKPLE--KLRPPSVTELL-LSNDGDQLLEGSITNFFVV 229 (318)
Q Consensus 158 ~~~~~~~~-~~~~~gv~l~~~~~~r~~~~---~k~~~-~~~~~~~l~--~a~~~G~de~l-L~~~g~~v~Eg~~sNiF~v 229 (318)
.|+++... ..+.+|+++.+.+..|..+. ...|+ .++..++++ +|+++|+||+| +|.+| +|+||+++|||++
T Consensus 125 ~p~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~K~~~ny~~~~la~~~A~~~G~de~l~ld~~G-~V~Egs~sNif~v 203 (309)
T 1iye_A 125 FPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVNG-YISEGAGENLFEV 203 (309)
T ss_dssp ECCCCTTCTTHHHHCEEEEECSSCCCCTTTSCTTSCBGGGHHHHHHHHHHHHHTTCSEEEEECTTS-BEEEETTBEEEEE
T ss_pred EEcCccCCcccccCCeEEEEeeeeccCCCCCCccccchhhhHHHHHHHHHHHHcCCCEEEEECCCC-cEEEcCceEEEEE
Confidence 88765322 12235899988877775532 34454 466667765 57889999995 55677 9999999999999
Q ss_pred EcCCCCchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-E
Q 021015 230 CRKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-V 308 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-p 308 (318)
++|+ |+|||+++|+|+||||+.||++|+++|++|+|+.++++||.+|||+|+|||++|| |
T Consensus 204 ~~g~-------------------l~TP~l~~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~eL~~adevfltns~~gv~P 264 (309)
T 1iye_A 204 KDGV-------------------LFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITP 264 (309)
T ss_dssp ETTE-------------------EEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCCBTTHHHHCSEEEEEETTTEEEE
T ss_pred ECCE-------------------EECCCCCCCCCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHhhCcEEEEccCCCEEEE
Confidence 9997 9999999999999999999999999999999999999999999999999999999 9
Q ss_pred EEEECceec
Q 021015 309 VTTIGHKNL 317 (318)
Q Consensus 309 V~~i~~~~~ 317 (318)
|++|+++.+
T Consensus 265 V~~id~~~~ 273 (309)
T 1iye_A 265 VRSVDGIQV 273 (309)
T ss_dssp EEEETTEEC
T ss_pred EEEECCEEC
Confidence 999999876
No 6
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.9e-48 Score=369.59 Aligned_cols=249 Identities=15% Similarity=0.159 Sum_probs=183.6
Q ss_pred ccEEEEC---CeE--ecCCCCCccccccCC---cceeEeeEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCC
Q 021015 4 TRIVFSN---GVV--SQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPT 75 (318)
Q Consensus 4 ~~~~~~n---G~~--~~~~~~~~is~~~~~---G~G~FEt~rv~~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~ 75 (318)
..++|+| |++ + +.+++.++++|++ |||+|||||+++| ++|+|++|++||.+||+.|+|+.|
T Consensus 14 ~~~v~~n~~~G~~~~~-~~~~a~i~~~Drg~~yGdgvFEtirv~~G--~~~~l~~Hl~RL~~Sa~~L~i~~p-------- 82 (315)
T 3sno_A 14 PVILIVEPYGGSIRQQ-NPNLPMVFWDDAALTRGDGIFETLLIRDG--HACNVRRHGERFKASAALLGLPEP-------- 82 (315)
T ss_dssp CEEEEECSTTCCEEEE-CTTSCCCCTTBTTTTTCCEEEEEEEEETT--EETTHHHHHHHHHHHHHHHTCCCC--------
T ss_pred CEEEEEECCCCeEEEe-eHHHCcccccchHhhcCCEeEEEEEEECC--EECCHHHHHHHHHHHHHHhCCCCc--------
Confidence 4589999 999 9 9999999999986 9999999999999 999999999999999999999322
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEeeCCCCCCccCCCCCCCCcceEEEE
Q 021015 76 PSGLEPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSV 155 (318)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~~~~~~~~~~~g~~~~~~~~~~~v 155 (318)
+.++|++.++++++.+. ..|+..+++||++++++.+.. ..|++++
T Consensus 83 --------------~~~~l~~~i~~~v~~~~---------~~n~~~~~~iRl~vtrG~~~~------------g~p~~~v 127 (315)
T 3sno_A 83 --------------ILEDWEKATQMGIESWY---------SHPNAGEASCTWTLSRGRSST------------GLASGWL 127 (315)
T ss_dssp --------------CHHHHHHHHHHHHHHHH---------TC--CCCEEEEEEEECCBTTT------------CCCEEEE
T ss_pred --------------CHHHHHHHHHHHHHhhc---------ccCCCCCEEEEEEEEeCCCCC------------CCCEEEE
Confidence 68899999999996421 124567899999999543210 1357788
Q ss_pred EEecCCCccccccCCCceEEEecccc-----------------------cCc--cccccccccchhHHH--hhCCCCCCE
Q 021015 156 HFSGYVPFVFGVEGTGARLALVGRGR-----------------------DVA--EAKYSDWVRLRKPLE--KLRPPSVTE 208 (318)
Q Consensus 156 ~~~~~~~~~~~~~~~gv~l~~~~~~r-----------------------~~~--~~k~~~~~~~~~~l~--~a~~~G~de 208 (318)
.+.|+++.....+.+|+++.+++.+. ..| .+..|+.++..++++ +|+++|+||
T Consensus 128 ~~~p~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~~~r~~~s~~~~~~~p~~l~~~Kt~nyl~~vla~~~A~~~G~de 207 (315)
T 3sno_A 128 TITPVSSDKLAQREHGVSVMTSSRGYSIDTGLPGIGKATRGELSKVERTPAPWLTVGAKTLAYAANMAALRYAKSNGFDD 207 (315)
T ss_dssp EEEECCHHHHHHHHHCEEEEEEEC-----------------------------------------------------CEE
T ss_pred EEEECCCcchhhhcCCEEEEEeccccccccccccccccccccccccccccCcccccCcchhccHHHHHHHHHHHHcCCCE
Confidence 88888754433345689988776332 112 244566677777776 578899999
Q ss_pred EEEeCCCCeEEecCcceEEEEEcCCCCchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecC
Q 021015 209 LLLSNDGDQLLEGSITNFFVVCRKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASS 288 (318)
Q Consensus 209 ~lL~~~g~~v~Eg~~sNiF~v~~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~ 288 (318)
+++.+..| |+||+++|||++++|+ |+|||+++|+|+||||+.||++|+++|++|+|+.++
T Consensus 208 ~l~l~~~G-v~E~s~sN~f~~~~g~-------------------l~TPp~~~~iL~GitR~~ll~~a~~~g~~v~e~~i~ 267 (315)
T 3sno_A 208 VIFTDGDR-VLEGATSTVVSFKGDK-------------------IRTPSPGGDILPGTTQAALFAHATEKGWRCKEKDLS 267 (315)
T ss_dssp EEEEETTE-EEEESSSEEEEEETTE-------------------EEEECCC------HHHHHHHHHHHHTTCEEEEECCB
T ss_pred EEEEeCCC-cEEcCCeeEEEEECCE-------------------EEcCCCCCCcChhHHHHHHHHHHHHcCCEEEEEECC
Confidence 95544344 9999999999999997 999999999999999999999999999999999999
Q ss_pred HhhHhcccEEEEeccccce-EEEEECceecC
Q 021015 289 WSQHELWKEAFITSVLLFN-VVTTIGHKNLS 318 (318)
Q Consensus 289 ~~dL~~adE~Fltns~~gi-pV~~i~~~~~~ 318 (318)
++||.+|||+|+|||++|| ||++||++.+.
T Consensus 268 ~~eL~~adevfl~ns~~gv~pV~~id~~~~~ 298 (315)
T 3sno_A 268 IDDLFGADSVWLVSSVRGPVRVTRLDGHKLR 298 (315)
T ss_dssp HHHHHHSSEEEEEETTTEEEEEEEESSSCCC
T ss_pred HHHHHhCCeeEEEcCcccEEEEEEECCEECC
Confidence 9999999999999999999 99999998763
No 7
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=100.00 E-value=1.1e-47 Score=360.70 Aligned_cols=243 Identities=16% Similarity=0.125 Sum_probs=202.8
Q ss_pred ccEEEECCeEecCCCCCccccccCC---cceeEeeEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q 021015 4 TRIVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLE 80 (318)
Q Consensus 4 ~~~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~ 80 (318)
..++|+||+++ +.+++.|++ |||+|||||+++| ++++|++|++||.+||+.|+++
T Consensus 21 ~m~~~~nG~~~-----~~i~~~d~g~~yGdgvFEtir~~~G--~~~~l~~Hl~RL~~Sa~~l~~~--------------- 78 (292)
T 2xpf_A 21 HMLDWVDGRPA-----AELSVRDRGLAYGDGLFETLAVRAG--TPRLLERHLARLEEGCRRLAIP--------------- 78 (292)
T ss_dssp --CEEETTEEC-----SEEETTBHHHHHCCEEEEEEEEETT--EETTHHHHHHHHHHHHHHTTCC---------------
T ss_pred ccEEEECCEEE-----EEEcccchhhhcCcEeEEEEEEECC--EECCHHHHHHHHHHHHHhcCCC---------------
Confidence 45799999998 678998875 9999999999999 8999999999999999999992
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEE-eeCCCCCCccCCCCCCCCcceEEEEEEec
Q 021015 81 PIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVS-GDYGKLSGIENMGSDDFLGVFDVSVHFSG 159 (318)
Q Consensus 81 ~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~-g~~~~~~~~~~~g~~~~~~~~~~~v~~~~ 159 (318)
.+.+.|.+.|.++++. ..+++||++++ |.+++++..+ ....|++++.+.|
T Consensus 79 --------~~~~~l~~~i~~~v~~---------------~~~~~iR~~v~rg~~~~g~~p~------~~~~~~~~i~~~p 129 (292)
T 2xpf_A 79 --------LDTAALRQELLAFCAA---------------LGDGVAKLIVTRGEGLRGYAPP------AEASPRRILSGSP 129 (292)
T ss_dssp --------CCHHHHHHHHHHHHHH---------------HCSEEEEEEEECCBCCSSSSCC------TTCCCEEEEEEEC
T ss_pred --------CCHHHHHHHHHHHHHh---------------CCCcEEEEEEEecCCCCCCCCC------CCCCcEEEEEEEE
Confidence 1378899999998853 13689999999 5455554421 1236788888899
Q ss_pred CCCccccccCCCceEEEecccccC--ccccccccccchhHHH--hhCCCCCCEE-EEeCCCCeEEecCcceEEEEEcCCC
Q 021015 160 YVPFVFGVEGTGARLALVGRGRDV--AEAKYSDWVRLRKPLE--KLRPPSVTEL-LLSNDGDQLLEGSITNFFVVCRKDN 234 (318)
Q Consensus 160 ~~~~~~~~~~~gv~l~~~~~~r~~--~~~k~~~~~~~~~~l~--~a~~~G~de~-lL~~~g~~v~Eg~~sNiF~v~~~~~ 234 (318)
+++.....+.+|+++.+.+..|.. .....|+.++..++++ +|+++|+||+ ++|.+| +|+||+++|||++++|+
T Consensus 130 ~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~Kt~ny~~~~la~~~A~~~G~de~L~ld~~G-~V~Egs~sNif~v~~g~- 207 (292)
T 2xpf_A 130 RPAYPERHWQQGVRLFACRTRLAEQPLLAGLKHLNRLEQVLARAEWSDAGHAEGLMLDVHE-RVVEGVFSNLLLVLDGT- 207 (292)
T ss_dssp CCCCCHHHHHTCEEEEECCCCBCCCTTTTBCCBSCCHHHHHHHTTCCCTTCSEEEEEBTTC-CEEEESSSEEEEEETTE-
T ss_pred CCccchhhccCCeEEEEeeeeccCCCCCCCcchhhhHHHHHHHHHHHHcCCCEEEEECCCC-CEEEcCCeEEEEEECCE-
Confidence 976542333568999887765532 3455667777777776 4788999999 556677 99999999999999997
Q ss_pred CchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-EEEEEC
Q 021015 235 SEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-VVTTIG 313 (318)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV~~i~ 313 (318)
|+|||+++|+|+||||+.||++|+++|++|+|+.++++||.+|||+|+|||++|| ||++|+
T Consensus 208 ------------------l~TPpl~~~iL~GitR~~vl~~a~~~G~~v~E~~i~~~eL~~adevfltns~~gv~PV~~id 269 (292)
T 2xpf_A 208 ------------------LVAPDLRRCGVAGVMRAELLERAEGIGVPLAIRDVSMAELATADEVFLCNSQFGIWPVRALD 269 (292)
T ss_dssp ------------------EEEECCSSSSBCCHHHHHHHHHHHHTTCCEEEECBCHHHHHTCSEEEEEETTTEEEEEEEET
T ss_pred ------------------EEeCCCCCccCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHhCCEEEEEcCcccEEEEEEEC
Confidence 9999999999999999999999999999999999999999999999999999999 999999
Q ss_pred ceec
Q 021015 314 HKNL 317 (318)
Q Consensus 314 ~~~~ 317 (318)
++.+
T Consensus 270 ~~~~ 273 (292)
T 2xpf_A 270 EHVW 273 (292)
T ss_dssp TEEC
T ss_pred CEEe
Confidence 9876
No 8
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=100.00 E-value=2.2e-47 Score=360.76 Aligned_cols=251 Identities=19% Similarity=0.189 Sum_probs=204.9
Q ss_pred cEEEECCeEecCCCCCccccccCC---cceeEeeEEEEcC--cccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 021015 5 RIVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNN--GSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGL 79 (318)
Q Consensus 5 ~~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~g--~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~ 79 (318)
.++|+||+++ +.+++.++++|++ |+|+|||||+++| +.++++|++|++||.+||+.|+|+.
T Consensus 6 ~~~~~nG~~~-~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~~~~~l~~Hl~RL~~Sa~~l~~~~------------- 71 (308)
T 2eiy_A 6 GLIWMNGAFV-PQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPAIFRLKEHVKRFYNSAKVLRMEI------------- 71 (308)
T ss_dssp CSEEETTEEE-CGGGCCCCTTCHHHHHCCEEECCEEEECCTTSCEEETHHHHHHHHHHHHHHTTCCC-------------
T ss_pred CeEEECCEEe-EhHHCccCccchHhhhcceEEEEEEEECCCCcccccCHHHHHHHHHHHHHHhCCCC-------------
Confidence 4799999999 9999999999986 9999999999997 1159999999999999999999932
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEeeC-CCCCCccCCCCCCCCcceEEEEEEe
Q 021015 80 EPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDY-GKLSGIENMGSDDFLGVFDVSVHFS 158 (318)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~~-~~~~~~~~~g~~~~~~~~~~~v~~~ 158 (318)
+++.+.|++.|.++++. ++..+++||++++++. ..++..+ ....+++++.+.
T Consensus 72 --------~~~~~~l~~~i~~~~~~-------------~~~~~~~iR~~v~~g~~~~~~~p~------~~~~~~~~i~~~ 124 (308)
T 2eiy_A 72 --------PFAPEELEEAIKEVVRR-------------NGYRSCYIRPLAWMGAKALGVNPL------PNNPAEVMVAAW 124 (308)
T ss_dssp --------SSCHHHHHHHHHHHHHH-------------TTCSSEEEEEEEECCSSCCSSCCG------GGCSCEEEEEEE
T ss_pred --------CCCHHHHHHHHHHHHHh-------------CCCCcEEEEEEEEecCCccCcCCC------CCCCeEEEEEEE
Confidence 36899999999999863 3446899999999543 3332211 123577888888
Q ss_pred cCCCccc-cccCCCceEEEecccccCcc---ccccccc-cchhHHH--hhCCCCCCEE-EEeCCCCeEEecCcceEEEEE
Q 021015 159 GYVPFVF-GVEGTGARLALVGRGRDVAE---AKYSDWV-RLRKPLE--KLRPPSVTEL-LLSNDGDQLLEGSITNFFVVC 230 (318)
Q Consensus 159 ~~~~~~~-~~~~~gv~l~~~~~~r~~~~---~k~~~~~-~~~~~l~--~a~~~G~de~-lL~~~g~~v~Eg~~sNiF~v~ 230 (318)
|+++... ..+.+|+++.+++..|..+. ...|+.+ +..++++ +|+++|+||+ ++|.+| +|+||+++|||+++
T Consensus 125 p~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~Kt~~ny~~~~la~~~A~~~G~de~l~ld~~G-~V~Egs~sNif~v~ 203 (308)
T 2eiy_A 125 EWGAYLGEEAVRKGARLITSSWARFPANVMPGKAKVGGNYVNSALAKMEAVAAGADEALLLDEEG-YVAEGSGENLFFVR 203 (308)
T ss_dssp EC--------CCSCEEEEECSSCBCCTTTSCTTSCBGGGHHHHHHHHHHHHHTTCSEEEEEBTTS-SEEEESSCEEEEEE
T ss_pred EcCccCCcccccCCeEEEEecceecCCCCcCcceehhhhHHHHHHHHHHHHHcCCCEEEEECCCC-eEEEcCceEEEEEE
Confidence 8765321 12356999998887775542 4455555 6667665 5778999999 556677 99999999999999
Q ss_pred cCCCCchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-EE
Q 021015 231 RKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-VV 309 (318)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV 309 (318)
+|+ |+|||+++ +|+||||+.||++|+++|++|+|+.++++||..|||+|+|||++|| ||
T Consensus 204 ~g~-------------------l~TP~~~~-iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~adevfltns~~gv~pV 263 (308)
T 2eiy_A 204 DGV-------------------IYALEHSV-NLEGITRDSVIRIAKDLGYEVQVVRATRDQLYMADEVFMTGTAAEVTPV 263 (308)
T ss_dssp TTE-------------------EEEECCTT-SCCCHHHHHHHHHHHHTTCCEEEECCCHHHHHTCSEEEEEETTTEEEEE
T ss_pred CCE-------------------EEeCCcCC-CCchHHHHHHHHHHHHCCCeEEEEeCCHHHHhhCCEEEEccCcceEEEE
Confidence 997 99999988 9999999999999999999999999999999999999999999999 99
Q ss_pred EEECceec
Q 021015 310 TTIGHKNL 317 (318)
Q Consensus 310 ~~i~~~~~ 317 (318)
++|+++.+
T Consensus 264 ~~id~~~~ 271 (308)
T 2eiy_A 264 SMIDWRPI 271 (308)
T ss_dssp EEETTEEC
T ss_pred EEEcCEEC
Confidence 99999876
No 9
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=1.4e-46 Score=360.82 Aligned_cols=248 Identities=14% Similarity=0.097 Sum_probs=204.6
Q ss_pred EECCeEecCCCCCccccccCC---cceeEeeEEEEcCccc-----ccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 021015 8 FSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNGSC-----LLFWERHLRRLASSARILYNSSPNLLFKSPTPSGL 79 (318)
Q Consensus 8 ~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~g~~~-----i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~ 79 (318)
|+||+++ +.+++.++++|++ |||+|||||+++| + +|+|++|++||.+||++|+|+
T Consensus 34 w~nG~~v-p~~~~~i~~~d~gl~yGdgvFE~ir~~~g--~dg~~~~f~l~~Hl~RL~~Sa~~L~i~-------------- 96 (345)
T 4dqn_A 34 WDDGKLT-EDATLHISESSPALHYGQEAFEGLKAYRT--KDGSVQLFRPNMNAERLQRTADRLLMP-------------- 96 (345)
T ss_dssp ECCCEEE-SCCSCCCCTTCHHHHSCCEEECCEEEEEC--TTSCEEEESHHHHHHHHHHHHHHTTCC--------------
T ss_pred EECCEEe-EhhhcccCccccccccccEEEEEEEEEeC--CCCcccccCHHHHHHHHHHHHHHhCCC--------------
Confidence 9999999 9999999999985 9999999999998 5 999999999999999999993
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEeeCC-CCCCccCCCCCCCCcceEEEEEEe
Q 021015 80 EPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYG-KLSGIENMGSDDFLGVFDVSVHFS 158 (318)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~~~-~~~~~~~~g~~~~~~~~~~~v~~~ 158 (318)
+++.+.|.+.|+++++.+.. |+|. .....+++||++++|+.+ +++.. ...++++|.+.
T Consensus 97 --------~~~~~~l~~~i~~lv~~n~~-~vp~----~~~~~~~yiR~~v~~~~~~~g~~p--------~~~~~~~i~~~ 155 (345)
T 4dqn_A 97 --------QVPTDKFIDAAKQVVRANEE-YVPP----YGTGATLYLRPLLIGVGDVIGVHP--------ADEYIFTIFAM 155 (345)
T ss_dssp --------CCCHHHHHHHHHHHHHHTGG-GSCC----TTSSCEEEEEEEEEEESCCCSSCC--------CSEEEEEEEEE
T ss_pred --------CCCHHHHHHHHHHHHHhccc-cCCC----CCCCCcEEEEEEEEeCCCccCCCC--------CCCeEEEEEEE
Confidence 25899999999999976421 1100 012357899999996553 33322 13678888888
Q ss_pred cCCCccccccCCCceEEEec-ccccCc--cccccc-cccchhHHH--hhCCCCCCEE-EEeC--CCCeEEecCcceEEEE
Q 021015 159 GYVPFVFGVEGTGARLALVG-RGRDVA--EAKYSD-WVRLRKPLE--KLRPPSVTEL-LLSN--DGDQLLEGSITNFFVV 229 (318)
Q Consensus 159 ~~~~~~~~~~~~gv~l~~~~-~~r~~~--~~k~~~-~~~~~~~l~--~a~~~G~de~-lL~~--~g~~v~Eg~~sNiF~v 229 (318)
|+++.... ..+|+++.+++ +.|..+ .+..|+ .++..++++ +|+++|++|+ +|+. +| +|+||+++|||++
T Consensus 156 p~~~~~~~-~~~gv~l~~~~~~~R~~~~~~~~~Kt~~nyl~~vla~~eA~~~G~de~l~ld~~~~g-~v~E~~~sNif~v 233 (345)
T 4dqn_A 156 PVGNYFKG-GLAPTNFLIQDDYDRAAPHGTGAAKVGGNYAASLLPGKVAHERQFSDVIYLDPATHT-KIEEVGSANFFGI 233 (345)
T ss_dssp EECCSCTT-SCCCEEEEECTTCCSSCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSCEEEECTTTSC-BEEEETTEEEEEE
T ss_pred ECcccccc-CCCCEEEEEccceEecCCCccccccccccCHHHHHHHHHHHHCCCCEEEEEcCCCCC-eEEEcCCceEEEE
Confidence 88754322 24689999887 567543 355666 777778776 5889999999 5565 36 9999999999999
Q ss_pred -EcCCCCchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHh-CCCcEEEEecCHhhHhcccEEEEeccccce
Q 021015 230 -CRKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRS-KGIPIRELASSWSQHELWKEAFITSVLLFN 307 (318)
Q Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~-~gi~v~E~~i~~~dL~~adE~Fltns~~gi 307 (318)
++++ |+||| ++++|+||||+.||++|++ +|++|+|+.++++||..|||+|+|||+++|
T Consensus 234 ~~~g~-------------------l~TP~-~~~iL~GitR~~vl~la~~~~g~~v~e~~i~~~el~~adevf~t~t~~~i 293 (345)
T 4dqn_A 234 TKDNE-------------------FITPL-SPSILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVI 293 (345)
T ss_dssp ETTCE-------------------EEECC-CTTSCCCHHHHHHHHHHHHTTCCEEEECCCBTTCGGGEEEEEEEETTTEE
T ss_pred ecCCE-------------------EEeCC-CCCccHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHhhhHHhhhcchhHE
Confidence 6776 99999 8999999999999999999 999999999999999999999999999999
Q ss_pred -EEEEECce
Q 021015 308 -VVTTIGHK 315 (318)
Q Consensus 308 -pV~~i~~~ 315 (318)
||++|+++
T Consensus 294 ~PV~~Id~~ 302 (345)
T 4dqn_A 294 SPIGGVQHG 302 (345)
T ss_dssp EEEEEEEET
T ss_pred EEEEEECcc
Confidence 99999987
No 10
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=100.00 E-value=1.6e-44 Score=338.06 Aligned_cols=232 Identities=21% Similarity=0.194 Sum_probs=193.4
Q ss_pred EECCeEecCCCCCccccccCC-cceeEeeEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCC
Q 021015 8 FSNGVVSQASDTPSVSTFLQE-RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEPIRTPS 86 (318)
Q Consensus 8 ~~nG~~~~~~~~~~is~~~~~-G~G~FEt~rv~~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~~~~~~ 86 (318)
|.+|+++ +...+.++++|++ |+|+|||||+++| ++++|++|++||.+||+.|+++.
T Consensus 18 ~~~~~~~-~~~~~~i~~~d~g~G~gvFEtir~~~G--~~~~l~~Hl~RL~~Sa~~l~~~~-------------------- 74 (285)
T 3csw_A 18 RGKFRRA-DEISLDFSLFEKSLQGAVYETLRTYSR--APFAAYKHYTRLKRSADFFNLPL-------------------- 74 (285)
T ss_dssp TTEEEES-SEEEEEHHHHHHHTTCCEEEEEEEETT--EETTHHHHHHHHHHHHHTTTCCC--------------------
T ss_pred ccCceEc-ccccCEeCCcccccceeeEEEEEEECC--EECCHHHHHHHHHHHHHHhCCCC--------------------
Confidence 5689999 8888899998876 8999999999999 89999999999999999999932
Q ss_pred CCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEeeCCCCCCccCCCCCCCCcceEEEEEEecCCCcccc
Q 021015 87 SSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGYVPFVFG 166 (318)
Q Consensus 87 ~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~~~~ 166 (318)
+++.+.+.+.+.++++. ++ ++++||+++... +.++++.+.|+++..
T Consensus 75 -p~~~~~l~~~i~~~~~~-------------~~-~~~~iR~~v~~~-----------------~~~~~i~~~p~~~~~-- 120 (285)
T 3csw_A 75 -SLSFDEFTKVLKAGADE-------------FK-QEVRIKVYLFPD-----------------SGEVLFVFSPLNIPD-- 120 (285)
T ss_dssp -SSCHHHHHHHHHHHHTT-------------CS-SCEEEEEEECTT-----------------TCCEEEEEEECCCCC--
T ss_pred -CCCHHHHHHHHHHHHHh-------------hC-CCeEEEEEEEcC-----------------CCEEEEEEEeCCCcc--
Confidence 36899999999999852 33 678999999311 114567778887543
Q ss_pred ccCCCceEEEecccccCc---cccccccccchhHHHhhCCCCCCEEE-EeCCCCeEEecCcceEEEEEcCCCCchhhhhh
Q 021015 167 VEGTGARLALVGRGRDVA---EAKYSDWVRLRKPLEKLRPPSVTELL-LSNDGDQLLEGSITNFFVVCRKDNSEAEDKFL 242 (318)
Q Consensus 167 ~~~~gv~l~~~~~~r~~~---~~k~~~~~~~~~~l~~a~~~G~de~l-L~~~g~~v~Eg~~sNiF~v~~~~~~~~~~~~~ 242 (318)
+.+|+++.+...++.+. ....|+.++..+++++.+...+||++ +|.+| +|+||+++|||++++|+
T Consensus 121 -~~~~~~l~~~~~~~~~~~~~~~~~Kt~~~l~~~la~~~A~~~de~L~ld~~G-~V~Egs~sNif~v~~g~--------- 189 (285)
T 3csw_A 121 -LETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVDCYDVILLGLNG-QVCEGSFSNVFLVKEGK--------- 189 (285)
T ss_dssp -CTTCEEEEECSSCCCCTTTSCTTCCBTTCHHHHHHHTTCSSSSEEEEECTTS-BEEEESSSEEEEEETTE---------
T ss_pred -ccCCeEEEEEeEEecCCCCCCCccchhccHHHHHHHHHHHhCCeEEEECCCC-cEEEcCceEEEEEECCE---------
Confidence 24688888877655322 23556666777888753332399995 55577 99999999999999997
Q ss_pred hhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-EEEEECceec
Q 021015 243 QTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-VVTTIGHKNL 317 (318)
Q Consensus 243 ~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV~~i~~~~~ 317 (318)
|+|||+++|+|+||||+.||++|+++|++|+|+.++++||.+|||+|+|||++|+ ||++|+++.+
T Consensus 190 ----------l~TP~l~~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~adevfltns~~gv~PV~~id~~~~ 255 (285)
T 3csw_A 190 ----------LITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEMFLTHTSAGVVPVRRLNEHSF 255 (285)
T ss_dssp ----------EEEECGGGTCCCCHHHHHHHHHHHHTTCCEEEECCBHHHHHTCSEEEEEETTTEEEEEEEETTEES
T ss_pred ----------EEeCCCCCCccCCHHHHHHHHHHHHCCCeEEEEeCCHHHHhhCCEEEEecCcceEEEEEEECCEEC
Confidence 9999999999999999999999999999999999999999999999999999999 9999999876
No 11
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=1e-43 Score=343.34 Aligned_cols=260 Identities=17% Similarity=0.094 Sum_probs=203.2
Q ss_pred EEEECCeEecCCCCCccccccCC---cceeEeeEEEEcC--c-ccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 021015 6 IVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNN--G-SCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGL 79 (318)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~g--~-~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~ 79 (318)
.+|+||+++ +.+++.+++.|++ |+|+|||||+++| + .++|+|++|++||.+||++|+|+
T Consensus 46 ~~w~ng~~~-p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l~~Hl~RL~~Sa~~l~~~-------------- 110 (365)
T 2a1h_A 46 KGWGQPRIQ-PFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLP-------------- 110 (365)
T ss_dssp TEECCCEEE-ESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC--------------
T ss_pred CeEECCEEe-EcccceeCccchhhhcCceeEeEEEEEecCCCceeecCHHHHHHHHHHHHHHhCCC--------------
Confidence 479999999 9999999998874 9999999999964 2 24699999999999999999993
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEeeC-CCCCCccCCCCCCCCcceEEEEEEe
Q 021015 80 EPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDY-GKLSGIENMGSDDFLGVFDVSVHFS 158 (318)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~~-~~~~~~~~~g~~~~~~~~~~~v~~~ 158 (318)
+++.+.|.+.|.++++.+.. |+ +.....+++||++++++. ..++ .+ ...++++|.+.
T Consensus 111 --------~~~~~~l~~~i~~lv~~~~~-~~-----p~~~g~~~yiR~~~~~~~~~~g~-------~p-~~~~~~~i~~~ 168 (365)
T 2a1h_A 111 --------SFDKLELLECIRRLIEVDKD-WV-----PDAAGTSLYVRPVLIGNEPSLGV-------SQ-PRRALLFVILC 168 (365)
T ss_dssp --------CCCHHHHHHHHHHHHHHTGG-GS-----CCSTTCEEEEEEEEEECCBCCSC-------SC-CSEEEEEEEEE
T ss_pred --------CCCHHHHHHHHHHHHHhccc-cC-----CCCCCceEEEEEEEEecCCccCC-------CC-CCCcEEEEEEE
Confidence 35899999999999976421 11 001124689999999654 3322 21 24678888888
Q ss_pred cCCCccccccCCCceEEEecc-cccCc--cccccc-cccchhHHH--hhCCCCCCEE-EE-eCCCCeEEecCcceEEEEE
Q 021015 159 GYVPFVFGVEGTGARLALVGR-GRDVA--EAKYSD-WVRLRKPLE--KLRPPSVTEL-LL-SNDGDQLLEGSITNFFVVC 230 (318)
Q Consensus 159 ~~~~~~~~~~~~gv~l~~~~~-~r~~~--~~k~~~-~~~~~~~l~--~a~~~G~de~-lL-~~~g~~v~Eg~~sNiF~v~ 230 (318)
|+++.....+.+++++.+... .|..+ ....|. .++..++++ +|+++|+||+ +| +.+| +|+|++++|||+++
T Consensus 169 p~~~~~~~g~~~~v~l~~~~~~~R~~~~~~~~~Kt~~ny~~~~la~~eA~~~G~de~L~l~d~~G-~V~E~~~sNif~v~ 247 (365)
T 2a1h_A 169 PVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDH-QLTEVGTMNIFVYW 247 (365)
T ss_dssp EECCSSSSSSCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETTTT-EEEEETTEEEEEEE
T ss_pred ECccccccccccceEEEEccccccCCCCccchhchhhccHHHHHHHHHHHHcCCCeEEEEECCCC-eEEEcCceEEEEEE
Confidence 887643221135788888763 55433 234454 667777776 5889999999 56 4466 99999999999997
Q ss_pred cCCCCchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhC-CCcEEEEecCHhhHhcc------cEEEEecc
Q 021015 231 RKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSK-GIPIRELASSWSQHELW------KEAFITSV 303 (318)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~-gi~v~E~~i~~~dL~~a------dE~Fltns 303 (318)
++. +|..+|+|||+++++||||||+.||++|+++ |++|+|+.++++||.+| ||+|+|||
T Consensus 248 ~~~--------------dg~~~l~TP~l~~~iL~GITR~~vl~la~~~~G~~v~Er~i~~~eL~~A~~~g~~dEvf~tnt 313 (365)
T 2a1h_A 248 THE--------------DGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGT 313 (365)
T ss_dssp ECT--------------TSCEEEEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEET
T ss_pred ecC--------------CCcEEEEeCCCCCCccccHHHHHHHHHHHhcCCCceEEEeCCHHHHHHHHhcCCccEEEEcCC
Confidence 410 0113599999999999999999999999994 99999999999999999 99999999
Q ss_pred ccce-EEEEEC--ceec
Q 021015 304 LLFN-VVTTIG--HKNL 317 (318)
Q Consensus 304 ~~gi-pV~~i~--~~~~ 317 (318)
+++| ||.+|+ ++.+
T Consensus 314 ~~~i~PV~~i~~~~~~~ 330 (365)
T 2a1h_A 314 ACQVCPVHRILYKDRNL 330 (365)
T ss_dssp TTEEEEEEEEEETTEEE
T ss_pred eeEEEEEEEEEeCCeEE
Confidence 9999 999999 6643
No 12
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=6.9e-44 Score=343.45 Aligned_cols=251 Identities=15% Similarity=0.131 Sum_probs=200.2
Q ss_pred EECCeEecCCCCCccccccCC---cceeEeeEEEEc---CcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q 021015 8 FSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHN---NGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEP 81 (318)
Q Consensus 8 ~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~---g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~ 81 (318)
|+||+++ +.+++.+++.|++ |||+|||||+++ |..++|+|++|++||.+||++|+|+
T Consensus 49 w~ng~i~-p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~~Hl~RL~~Sa~~L~ip---------------- 111 (358)
T 3uzo_A 49 WDAGTLT-EDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMP---------------- 111 (358)
T ss_dssp ECCCEEE-SCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHHHHHHHHHHHHHHTTCC----------------
T ss_pred EECCEEe-EcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCC----------------
Confidence 9999999 9999999998874 999999999995 4223789999999999999999993
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEeeCC-CCCCccCCCCCCCCcceEEEEEEecC
Q 021015 82 IRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYG-KLSGIENMGSDDFLGVFDVSVHFSGY 160 (318)
Q Consensus 82 ~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~~~-~~~~~~~~g~~~~~~~~~~~v~~~~~ 160 (318)
+++.+.|.+.|+++++.+... .| ......++|||++++++.+ .++.. ...+.+++++.|+
T Consensus 112 ------~~~~e~l~~~i~~lv~~n~~~-vp----~~~~~~~~yiR~~v~~~~~~~G~~p--------~~~~~~~i~~~P~ 172 (358)
T 3uzo_A 112 ------ELSDEQFIDACLQVVRANEHF-LP----PYGTGGSLYLRPFVIGVGDNIGVRT--------APEFIFSVFCVPV 172 (358)
T ss_dssp ------CCCHHHHHHHHHHHHHHTGGG-SC----CTTSCCEEEEEEEEEEESSCCSSSC--------CSEEEEEEEEEEE
T ss_pred ------CCCHHHHHHHHHHHHHHcCCc-CC----CCCCCceEEEEEEEEecCCccccCC--------CCCeEEEEEEecC
Confidence 358999999999999865321 10 0112357899999996543 33221 1356777888887
Q ss_pred CCccccccCCCceEEEecccccCcc--cccc-ccccchhHHH--hhCCCCCCEE-EEeCC--CCeEEecCcceEEEEEc-
Q 021015 161 VPFVFGVEGTGARLALVGRGRDVAE--AKYS-DWVRLRKPLE--KLRPPSVTEL-LLSND--GDQLLEGSITNFFVVCR- 231 (318)
Q Consensus 161 ~~~~~~~~~~gv~l~~~~~~r~~~~--~k~~-~~~~~~~~l~--~a~~~G~de~-lL~~~--g~~v~Eg~~sNiF~v~~- 231 (318)
++.... ..+|+++.+.+..|..|. ...| ..|+..++++ +|+++|++|+ +||.+ | +|+|++++|||++++
T Consensus 173 ~~~~~~-g~~~v~l~~~~~~R~~p~~~~~~K~~~NYl~~vla~~eA~~~G~~e~l~ld~~~~g-~V~E~~~sNif~v~~d 250 (358)
T 3uzo_A 173 GPYFKG-GLTPTNFITSDYDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHT-TIEEAGAANFFAITQD 250 (358)
T ss_dssp CCSSCS-SSCCEEEECCSCCSSCTTSSTTSCBHHHHHHHHHHHHHHHHTTCSEECCBCTTTSC-BBCBCSSSEEEEEETT
T ss_pred hhhhhc-CCccEEEEEEeeeccCCCccccccchhhhHHHHHHHHHHHHcCCCEEEEEeCCCCC-eEEEcCCeeEEEEECC
Confidence 653211 134688888777776652 2345 4667777776 5889999999 56664 6 999999999999974
Q ss_pred CCCCchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHh-CCCcEEEEecCHhhHhcccEEEEeccccce-EE
Q 021015 232 KDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRS-KGIPIRELASSWSQHELWKEAFITSVLLFN-VV 309 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~-~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV 309 (318)
|+ +|+||| ++++|+||||+.||++|++ +|++|+|+.++++||..|||+|+|||+++| ||
T Consensus 251 g~------------------~l~TP~-~~~iL~GItR~~vl~la~~~~g~~v~e~~i~~~eL~~adEvf~t~t~~~i~PV 311 (358)
T 3uzo_A 251 GQ------------------KFVTPQ-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDELGKFSEAGACGTAAVITPI 311 (358)
T ss_dssp SC------------------EEEEEC-CTTSCCCHHHHHHHHHHHHTTCCEEEEECCBTTCGGGEEEEEEECTTTSSEEE
T ss_pred Ce------------------EEEECC-cCCcccCHHHHHHHHHHHhhcCCeEEEEECCHHHHHhhcceeEEcCcceEEEE
Confidence 42 399999 8899999999999999999 999999999999999999999999999999 99
Q ss_pred EEECce
Q 021015 310 TTIGHK 315 (318)
Q Consensus 310 ~~i~~~ 315 (318)
.+|+++
T Consensus 312 ~~Id~~ 317 (358)
T 3uzo_A 312 GGIQHG 317 (358)
T ss_dssp EEEEET
T ss_pred EEECcc
Confidence 999986
No 13
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=2.4e-43 Score=340.98 Aligned_cols=256 Identities=15% Similarity=0.103 Sum_probs=202.9
Q ss_pred EEEECCeEecCCCCCccccccCC---cceeEeeEEEE---cCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 021015 6 IVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTH---NNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGL 79 (318)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~---~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~ 79 (318)
-+|+||+++ +.+++.+++.|++ |||+|||||++ +|..++|++++|++||.+||++|+|+
T Consensus 52 ~~W~~g~i~-p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~lFrl~~H~~RL~~Sa~~L~mp-------------- 116 (372)
T 3dth_A 52 EGWHNAQVI-PYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIP-------------- 116 (372)
T ss_dssp TEEEEEEEE-ESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC--------------
T ss_pred CeEECCcEe-ehHhcccCccccHhhcCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCC--------------
Confidence 379999999 9999999999985 99999999999 55223789999999999999999992
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcC-CCcceEEEEEEEeeCCCCCCccCCCCCCCCcceEEEEEEe
Q 021015 80 EPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERR-DGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFS 158 (318)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~-~~~~~~iri~v~g~~~~~~~~~~~g~~~~~~~~~~~v~~~ 158 (318)
+++.+.|.+.|+++++.+.. |+| .. ....+|||++++++++. +|+.+ ...++++|.+.
T Consensus 117 --------~~~~e~l~~~i~~lv~~n~~-~vp-----~~~~~~~lYiRp~~~~~~~~------~G~~p-~~~~~~~i~~~ 175 (372)
T 3dth_A 117 --------ELPEEVFIESLRQLIAVDEK-WVP-----PAGGEESLYLRPFVIATEPG------LGVRP-SNEYRYLLIAS 175 (372)
T ss_dssp --------CCCHHHHHHHHHHHHHHHGG-GSC-----CSSSSCEEEEEEEEEECCCC------SSCSC-CSEEEEEEEEE
T ss_pred --------CCCHHHHHHHHHHHHHhccc-cCC-----CCCCCCcEEEEEEEEcCCCc------CCcCC-CCCeEEEEEEe
Confidence 25799999999999987532 221 11 34678999999965431 12221 23678888888
Q ss_pred cCCCccccccCCCceEEEec-ccccCcc--ccccc-cccchhHHH--hhCCCCCCEE-EEeC--CCCeEEecCcceEEEE
Q 021015 159 GYVPFVFGVEGTGARLALVG-RGRDVAE--AKYSD-WVRLRKPLE--KLRPPSVTEL-LLSN--DGDQLLEGSITNFFVV 229 (318)
Q Consensus 159 ~~~~~~~~~~~~gv~l~~~~-~~r~~~~--~k~~~-~~~~~~~l~--~a~~~G~de~-lL~~--~g~~v~Eg~~sNiF~v 229 (318)
|+++.... ..+|+++.+.. +.|..|. ...|. -|+..++++ +|+++|++|+ +||. +| +|+|++++|||+|
T Consensus 176 p~~~y~~~-g~~~v~l~v~~~~~R~~p~g~~~~K~~gNY~~~~la~~eA~~~G~de~l~ld~~~~g-~v~E~~~sNif~v 253 (372)
T 3dth_A 176 PAGAYFKG-GIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERR-YVEEMGGMNLFFV 253 (372)
T ss_dssp EESCSSSC-SSSCEEEEECSSCCSCCTTSSTTSCCHHHHHTTHHHHHHHHHTTCSEEEEECTTTSC-BEEEETTEEEEEE
T ss_pred eCchhhcc-CCccEEEEEccceeccCCCcccchhhHhhhHHHHHHHHHHHHcCCCEEEEEcCCCCC-EEEEcCceeEEEE
Confidence 88764322 23578887764 5665442 22333 355556665 5889999999 5665 56 9999999999999
Q ss_pred EcCCCCchhhhhhhhcCCCCce-EEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcc------cEEEEec
Q 021015 230 CRKDNSEAEDKFLQTCNNSHSF-EVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELW------KEAFITS 302 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~-~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~a------dE~Fltn 302 (318)
+++. .+ +|+|||++.+|||||||+.||++|+++|++|+|+.++++||.+| ||+|+||
T Consensus 254 ~~~~----------------~g~~l~TP~l~~~iL~GITR~~vl~la~~~G~~v~Er~i~~~eL~~a~~~g~~dEvf~tg 317 (372)
T 3dth_A 254 FGSG----------------GSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACG 317 (372)
T ss_dssp ESCG----------------GGCEEEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEE
T ss_pred ECCC----------------CceEEEECCCCCCcCHHHHHHHHHHHHHHCCCeEEEEECCHHHHHhhhhcCCccEEEEec
Confidence 9881 01 39999999999999999999999999999999999999999999 9999999
Q ss_pred cccce-EEEEECce
Q 021015 303 VLLFN-VVTTIGHK 315 (318)
Q Consensus 303 s~~gi-pV~~i~~~ 315 (318)
|+++| ||.+|+++
T Consensus 318 Ta~~i~PV~~Id~~ 331 (372)
T 3dth_A 318 TAAVITPVSHVKHH 331 (372)
T ss_dssp TTTEEEEEEEEEET
T ss_pred ccceEEEEEEEccC
Confidence 99999 99999875
No 14
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=8e-43 Score=339.17 Aligned_cols=258 Identities=14% Similarity=0.070 Sum_probs=202.0
Q ss_pred EEEECCeEecCCCCCccccccC---CcceeEeeEEEEcC--c-ccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 021015 6 IVFSNGVVSQASDTPSVSTFLQ---ERRGAYTTTRTHNN--G-SCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGL 79 (318)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~---~G~G~FEt~rv~~g--~-~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~ 79 (318)
.+|+||+++ +.+++.+++.|+ +|+|+|||||+++| + .++|++++|++||.+||++|+|+
T Consensus 66 ~~w~ng~~~-p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~frld~H~~RL~~Sa~~l~~p-------------- 130 (386)
T 2coi_A 66 FGWEKPHIK-PLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLP-------------- 130 (386)
T ss_dssp TEECCCEEE-ECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC--------------
T ss_pred cEEECCEEe-ecccCccCcccchhhcCceeEEEEEEEeCCCCceeecCHHHHHHHHHHHHHhcCCC--------------
Confidence 479999999 999999999887 49999999999987 1 25999999999999999999992
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEeeCCCCCCccCCCCCCCCcceEEEEEEec
Q 021015 80 EPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSG 159 (318)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~~~~~~~~~~~g~~~~~~~~~~~v~~~~ 159 (318)
+++.+.|.+.|.++++.+.. |+| ......++||++++|+++. +|+.+ ...++++|.+.|
T Consensus 131 --------~~~~e~~~~~i~~lv~~~~~-~vp-----~~~g~~~yiR~~~~~~~~~------~g~~p-~~~~~~~i~~~p 189 (386)
T 2coi_A 131 --------VFDKEELLECIQQLVKLDQE-WVP-----YSTSASLYIRPTFIGTEPS------LGVKK-PTKALLFVLLSP 189 (386)
T ss_dssp --------CCCHHHHHHHHHHHHHHTGG-GSC-----SSSSCEEEEEEEEEECCCS------CSCSC-CSEEEEEEEEEE
T ss_pred --------CCCHHHHHHHHHHHHHhccc-cCC-----CCCCccEEEEEEEEecCCc------cccCC-CCCcEEEEEEEE
Confidence 35899999999999976431 221 1123578999999965432 12221 236788888888
Q ss_pred CCCccccccCCCceEEEecc-cccCc--cccccc-cccchhHHH--hhCCCCCCEE-EEe-CCCCeEEecCcceEEEEE-
Q 021015 160 YVPFVFGVEGTGARLALVGR-GRDVA--EAKYSD-WVRLRKPLE--KLRPPSVTEL-LLS-NDGDQLLEGSITNFFVVC- 230 (318)
Q Consensus 160 ~~~~~~~~~~~gv~l~~~~~-~r~~~--~~k~~~-~~~~~~~l~--~a~~~G~de~-lL~-~~g~~v~Eg~~sNiF~v~- 230 (318)
+++.....+.+|+++.+... .|..| ....|. .++..++++ +|+++|+||+ +|| .+| +|+|++++|||+++
T Consensus 190 ~~~y~~~~~~~~v~l~~~~~~~r~~p~~~g~~K~~~Ny~~~~la~~eA~~~G~de~L~ld~~~g-~V~E~~~sNiF~v~~ 268 (386)
T 2coi_A 190 VGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGEDH-QITEVGTMNLFLYWI 268 (386)
T ss_dssp ECCCC-----CCEEEEECTTCCSCCTTSSTTSCCTHHHHTTHHHHHHHHTTTCSEEEEEETTTT-EEEEETTEEEEEEEE
T ss_pred CcccccccccccEEEEEcccccccCCCcccccccccChHHHHHHHHHHHHcCCCEEEEEECCCC-EEEEeCCceEEEEEE
Confidence 87643222235888888764 35433 122343 455556665 5889999999 667 577 99999999999997
Q ss_pred --cCCCCchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHh-CCCcEEEEecCHhhHhcc------cEEEEe
Q 021015 231 --RKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRS-KGIPIRELASSWSQHELW------KEAFIT 301 (318)
Q Consensus 231 --~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~-~gi~v~E~~i~~~dL~~a------dE~Flt 301 (318)
+| ..+|+|||+++++||||||+.||++|++ +|++|+|+.++++||.+| ||+|+|
T Consensus 269 ~~~g-----------------~~~l~TP~l~~~iL~GITR~~vl~la~~~~G~~V~Er~i~~~eL~~A~~~g~~dEvF~t 331 (386)
T 2coi_A 269 NEDG-----------------EEELATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGS 331 (386)
T ss_dssp CTTS-----------------CEEEEECCCSSSSCCCHHHHHHHHHHHHHCSSEEEECCCBHHHHHHHHTTTCEEEEEEE
T ss_pred cCCC-----------------CEEEEECCCCCCccHHHHHHHHHHHHHhccCCcEEEEECCHHHHHHHHhcCCccEEEEe
Confidence 55 1239999999999999999999999999 899999999999999999 999999
Q ss_pred ccccce-EEEEEC--ceec
Q 021015 302 SVLLFN-VVTTIG--HKNL 317 (318)
Q Consensus 302 ns~~gi-pV~~i~--~~~~ 317 (318)
||+++| ||.+|+ ++.+
T Consensus 332 gTa~~i~PV~~I~~~~~~~ 350 (386)
T 2coi_A 332 GTACVVCPVSDILYKGETI 350 (386)
T ss_dssp ETTTEEEEEEEEEESSSEE
T ss_pred cceeEEEEEEEEeeCCeEE
Confidence 999999 999999 6554
No 15
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=100.00 E-value=2.2e-43 Score=323.51 Aligned_cols=222 Identities=21% Similarity=0.186 Sum_probs=179.1
Q ss_pred EEEECCeEecCCCCCccccccC---C-cceeEeeEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q 021015 6 IVFSNGVVSQASDTPSVSTFLQ---E-RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEP 81 (318)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~---~-G~G~FEt~rv~~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~ 81 (318)
|+|+||+.. . +++|+ + |+|+|||||+++| ++++|++|++||.+||+.|+++.
T Consensus 1 m~~~nG~~~-~------~~~d~g~~y~G~gvFEtir~~~G--~~~~l~~Hl~RL~~Sa~~l~~~~--------------- 56 (246)
T 2zgi_A 1 MRLLNGTPL-A------LALPEAFLYHGASVFTTLRAEGG--RPLWLEEHLARLRRHALALGLSY--------------- 56 (246)
T ss_dssp CEEETTEEC-C------CSSCHHHHHSCCCEEEEEEEETT--EETTHHHHHHHHHHHHHHTTCCC---------------
T ss_pred CEEECCccc-C------CCccCcccccCeeEEEEEEEECC--EeCCHHHHHHHHHHHHHHhCCCC---------------
Confidence 389999987 2 55565 5 9999999999999 99999999999999999999932
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcC-CCcceEEEEEEEeeCCCCCCccCCCCCCCCcceEEEEEEecC
Q 021015 82 IRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERR-DGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGY 160 (318)
Q Consensus 82 ~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~-~~~~~~iri~v~g~~~~~~~~~~~g~~~~~~~~~~~v~~~~~ 160 (318)
+++ +.|.+.|.++++. + +..+++||++++++++. +...|+
T Consensus 57 ------p~~-~~l~~~i~~~~~~-------------~~~~~~~~vR~~v~~g~~~-------------------~~~~p~ 97 (246)
T 2zgi_A 57 ------PGD-EAFLEDLEALLRA-------------FPKAPCLRLRFTVGEGVRL-------------------SEARPY 97 (246)
T ss_dssp ------CCH-HHHHHHHHHHTTS-------------CTTCSEEEEEEEEETTEEE-------------------EEEEEC
T ss_pred ------CCH-HHHHHHHHHHHHh-------------cCCCCCEEEEEEEECCCCc-------------------cCcCcC
Confidence 246 8899999998852 3 45689999999944310 111344
Q ss_pred CCccccccCCCceEEEecccccCc-cccccccccchhHHH--hhCCCCCCEEE-EeCCCCeEEecCcceEEEEEcCCCCc
Q 021015 161 VPFVFGVEGTGARLALVGRGRDVA-EAKYSDWVRLRKPLE--KLRPPSVTELL-LSNDGDQLLEGSITNFFVVCRKDNSE 236 (318)
Q Consensus 161 ~~~~~~~~~~gv~l~~~~~~r~~~-~~k~~~~~~~~~~l~--~a~~~G~de~l-L~~~g~~v~Eg~~sNiF~v~~~~~~~ 236 (318)
++.....+.+|+++.+.+. |..+ ....|+.++..++++ +|+++|+||++ +|.+| +|+||+++|||++++|+
T Consensus 98 ~~~~~~~~~~g~~l~~~~~-r~~~~~~~~Kt~n~~~~~~a~~~A~~~g~de~l~ld~~G-~v~Egs~sNif~v~~g~--- 172 (246)
T 2zgi_A 98 APLPLSLYREGVRVRLTGY-RVHPDLARYKTGNYLPYRLALEEARKEGAFEGLLLDAFG-HVVDGSRTSPLLFREGT--- 172 (246)
T ss_dssp CCCCTHHHHHCBCEEEEEE-ECCTTTTTSCBSCCHHHHHHHHHHHTTTCSEEEEECTTS-CEEEESSSEEEEEETTE---
T ss_pred CCCchhHhhcCeEEEEecc-cCCCCCccchhhhhHHHHHHHHHHHHcCCCEEEEECCCC-CEEEcCCeEEEEEECCE---
Confidence 4322222345888888776 6544 234556667777665 57899999995 55677 99999999999999997
Q ss_pred hhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-EEEEECce
Q 021015 237 AEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-VVTTIGHK 315 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV~~i~~~ 315 (318)
|+|| +|+|+||||+.||++|+++|++|+|+.++++||.+ |+|+|||++|| ||++|+++
T Consensus 173 ----------------l~TP---~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~--evfltns~~gi~pV~~id~~ 231 (246)
T 2zgi_A 173 ----------------LYLL---EGGLEGITREKVAEAARGLGLRVERGLFRPEGLRG--HLLLAGSGVGLLPVRPPPPE 231 (246)
T ss_dssp ----------------EEEE---CSSCCCHHHHHHHHHHHHTTCEEEEECCCGGGCCS--EEEEEETTTEEEEBSSCCGG
T ss_pred ----------------EECC---CCccCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHh--hHeeecChhheEEEEEEChH
Confidence 9999 78999999999999999999999999999999998 99999999999 99999986
Q ss_pred e
Q 021015 316 N 316 (318)
Q Consensus 316 ~ 316 (318)
.
T Consensus 232 ~ 232 (246)
T 2zgi_A 232 L 232 (246)
T ss_dssp G
T ss_pred H
Confidence 4
No 16
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=3.2e-42 Score=333.58 Aligned_cols=257 Identities=15% Similarity=0.092 Sum_probs=195.6
Q ss_pred EEECCeEecCCCCCccccccCC---cceeEeeEEEE---cCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q 021015 7 VFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTH---NNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLE 80 (318)
Q Consensus 7 ~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~---~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~ 80 (318)
-|+||+++ |.+++.+++.+++ |+||||+||+| +|...+|++++|++||.+||+.|.|+
T Consensus 53 gW~ng~iv-p~~~~~i~p~~~~lhYG~gvFEgiraY~~~dG~i~~Fr~~~h~~Rl~~Sa~~l~iP--------------- 116 (372)
T 3dtg_A 53 GWHNAQVI-PYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIP--------------- 116 (372)
T ss_dssp EEEEEEEE-ESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC---------------
T ss_pred cEeCCEEE-EchhceeCcchhhhhccceeeeeEEEEECCCCeEEeeCchHHHHHHhhcccccCCC---------------
Confidence 49999999 9999999999874 99999999999 55333588999999999999999992
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEeeCCCCCCccCCCCCCCCcceEEEEEEecC
Q 021015 81 PIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGY 160 (318)
Q Consensus 81 ~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~~~~~~~~~~~g~~~~~~~~~~~v~~~~~ 160 (318)
.++.+.+...+.+++..+.+. + +..++..++|||++++++.+. +|+. +...+.+++.+.|.
T Consensus 117 -------~~~~e~~~~~~~~l~~~~~~~-v----~~~~~~~~~YiRp~~~~~~~~------lgv~-p~~~~~~~ii~~p~ 177 (372)
T 3dtg_A 117 -------ELPEEVFIESLRQLIAVDEKW-V----PPAGGEESLYLRPFVIATEPG------LGVR-PSNEYRYLLIASPA 177 (372)
T ss_dssp -------CCCHHHHHHHHHHHHHHHGGG-S----CCSSSSCEEEEEEEEEECCCC------CSCS-CCSEEEEEEEEEEE
T ss_pred -------CCCHHHHHHHHHHHHHHhhhh-c----cccCCCCceEEEEEEEeecCc------cCcC-CCCCceeeeEeccc
Confidence 146888889999998765432 2 123345789999999966532 2333 22456677777787
Q ss_pred CCccccccCCCceEEE-ecccccCcccc---ccccccchhHHH--hhCCCCCCEE-EEeC--CCCeEEecCcceEEEEEc
Q 021015 161 VPFVFGVEGTGARLAL-VGRGRDVAEAK---YSDWVRLRKPLE--KLRPPSVTEL-LLSN--DGDQLLEGSITNFFVVCR 231 (318)
Q Consensus 161 ~~~~~~~~~~gv~l~~-~~~~r~~~~~k---~~~~~~~~~~l~--~a~~~G~de~-lL~~--~g~~v~Eg~~sNiF~v~~ 231 (318)
.+...... ....+.+ ....|..|... -+.-++..+.++ +|+++|+||+ +||. +| +|+|++++|||+|.+
T Consensus 178 ~~~~~~~~-~~~~~~~~~~~~R~~p~~~~~~K~~gNY~~~~la~~eA~~~G~deal~Ld~~~~g-~V~E~~~sNiF~V~~ 255 (372)
T 3dtg_A 178 GAYFKGGI-KPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERR-YVEEMGGMNLFFVFG 255 (372)
T ss_dssp SCSSTTSS-SCEEEEECSSCCSCCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSEEEEECTTTSC-BEEEETTEEEEEEES
T ss_pred ccccccCc-ccceeecccceeecCcCCcchHHhcCCcchhhhHHHHHHhcCcchhhhhcccccc-ceeecCceEEEEEEe
Confidence 65433221 2333333 34455444211 123344455555 5889999999 6663 45 999999999999964
Q ss_pred CCCCchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcc------cEEEEecccc
Q 021015 232 KDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELW------KEAFITSVLL 305 (318)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~a------dE~Fltns~~ 305 (318)
+. ..++|+|||++++||+||||+.||++|+++|++|+|+.++++||.+| ||+|+|||+.
T Consensus 256 ~~---------------kdg~liTPpl~~~iL~GITR~sVi~LA~~~Gi~V~Er~it~~El~~A~~~~~~dEvF~tGTaa 320 (372)
T 3dtg_A 256 SG---------------GSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAA 320 (372)
T ss_dssp CG---------------GGCEEEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEETTT
T ss_pred cC---------------CCceEEeCCccccccccHHHHHHHHHHHHCCceEEEEeCCHHHHHHHhhcCCCcEEEECCCcc
Confidence 41 12459999999999999999999999999999999999999999998 9999999999
Q ss_pred ce-EEEEECce
Q 021015 306 FN-VVTTIGHK 315 (318)
Q Consensus 306 gi-pV~~i~~~ 315 (318)
+| ||.+|+++
T Consensus 321 ~I~PV~~Id~~ 331 (372)
T 3dtg_A 321 VITPVSHVKHH 331 (372)
T ss_dssp EEEEEEEEEET
T ss_pred eEEEEEEEecC
Confidence 99 99999875
No 17
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=100.00 E-value=1e-39 Score=295.07 Aligned_cols=200 Identities=20% Similarity=0.196 Sum_probs=167.4
Q ss_pred CcceeEeeEEEE-cCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhhhh
Q 021015 28 ERRGAYTTTRTH-NNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEPIRTPSSSSSLSMWESMIKSLVNDSM 106 (318)
Q Consensus 28 ~G~G~FEt~rv~-~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~li~~~~ 106 (318)
.|+|+|||||++ +| ++++|++|++||.+||+.|+++ ++.+.|.+.|.++++
T Consensus 14 ~g~glFEtir~~~~G--~~~~l~~Hl~RL~~Sa~~l~~~-----------------------~~~~~l~~~i~~~~~--- 65 (221)
T 3qqm_A 14 ADFELIETMRWQPGT--SFLRFDRHLARLYGSAAELGFA-----------------------CDPQRIAEVLSDALD--- 65 (221)
T ss_dssp SCCEEEEEEEEETTT--EETTHHHHHHHHHHHHHHHTCC-----------------------CCHHHHHHHHHHHHT---
T ss_pred CCCEEEEEEEEecCC--cCcCHHHHHHHHHHHHHHcCCC-----------------------CCHHHHHHHHHHHHh---
Confidence 489999999999 88 8999999999999999999992 478899999998884
Q ss_pred cccchhhhhhcCCCcceEEEEEEEeeCCCCCCccCCCCCCCCcceEEEEEEecCCCccccccCCCceEEEeccccc--Cc
Q 021015 107 NEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGYVPFVFGVEGTGARLALVGRGRD--VA 184 (318)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~iri~v~g~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~~~~~~~~gv~l~~~~~~r~--~~ 184 (318)
++..+++||+++++++ .+.+.+.|+++... .+|+++.++..++. .+
T Consensus 66 -----------~~~~~~~iR~~~~~~g------------------~~~i~~~p~~~~~~---~~~~~l~~~~~~~~~~~~ 113 (221)
T 3qqm_A 66 -----------GARTAMRTRLALARNG------------------DATASAQPYEPLAA---DKVWILRLARTRLDSQNT 113 (221)
T ss_dssp -----------TCCSCEEEEEEEETTS------------------CEEEEEEECCCCCT---TCCEEEEECSCCBCTTCG
T ss_pred -----------cCCCCEEEEEEEEcCC------------------CEEEEEEcCCCCCC---CCCEEEEEeeeEecCCCc
Confidence 2346799999999543 14567778876432 36889988876664 34
Q ss_pred cccccccccchhHHH--hhCCCCCCEE-EEeCCCCeEEecCcceEEEEEc-CCCCchhhhhhhhcCCCCceEEEccCCCC
Q 021015 185 EAKYSDWVRLRKPLE--KLRPPSVTEL-LLSNDGDQLLEGSITNFFVVCR-KDNSEAEDKFLQTCNNSHSFEVQTAPISD 260 (318)
Q Consensus 185 ~~k~~~~~~~~~~l~--~a~~~G~de~-lL~~~g~~v~Eg~~sNiF~v~~-~~~~~~~~~~~~~~~~~~~~~l~TPpl~~ 260 (318)
....|+.++..+.++ +|+++|+||+ +++.+| +|+||+++|||++++ ++ |+|||+++
T Consensus 114 ~~~~Kt~nr~~~~~a~~~a~~~g~~e~l~l~~~g-~v~E~s~sNif~~~~~~~-------------------l~TP~~~~ 173 (221)
T 3qqm_A 114 LLRHKTSRRQLYTHARSEYLVTQADEVLLANERG-EICEGTITNVFADFGDGV-------------------LATPRLDC 173 (221)
T ss_dssp GGGSCBSCCHHHHHHHHTSCTTTCSEEEEEBTTS-CEEEESSCEEEEECSSSC-------------------EEEECGGG
T ss_pred chhchhcchHHHHHHHHHHHhcCCcEEEEECCCC-eEEEcCceeEEEEeCCCE-------------------EECCCCcc
Confidence 456667777777666 4668999999 455677 999999999999998 77 99999999
Q ss_pred CCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-EEEEE
Q 021015 261 GVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-VVTTI 312 (318)
Q Consensus 261 giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV~~i 312 (318)
|+|+||||+.||+.+ +|+|+.++++||..|||+|+|||++|+ ||+.+
T Consensus 174 ~~L~GitR~~ll~~~-----~v~e~~i~~~~L~~adevf~~ns~~gi~pV~l~ 221 (221)
T 3qqm_A 174 GLLPGVLRAELLDEG-----RAEEAIYSYDDLKSAKALFVGNSLRGLIPAKLV 221 (221)
T ss_dssp TCCCCHHHHHHHHTT-----SEEEECCCHHHHTTCSEEEEEETTTEEEEEEEC
T ss_pred CcchHHHHHHHHhhC-----cEEEEeCCHHHHHhCCEEEEEecceeEEEEEEC
Confidence 999999999999964 799999999999999999999999999 99753
No 18
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=100.00 E-value=1.4e-36 Score=268.81 Aligned_cols=192 Identities=11% Similarity=0.002 Sum_probs=144.9
Q ss_pred CCcceeEeeEEEEcCcccccCHHHHHHHHHHHH-HHhcCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhhh
Q 021015 27 QERRGAYTTTRTHNNGSCLLFWERHLRRLASSA-RILYNSSPNLLFKSPTPSGLEPIRTPSSSSSLSMWESMIKSLVNDS 105 (318)
Q Consensus 27 ~~G~G~FEt~rv~~g~~~i~~l~~Hl~RL~~Sa-~~L~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~li~~~ 105 (318)
++|+|+|||||+++| ++++|++|++||.+|| +.|+++.| .+++.+.|.+.+. +++
T Consensus 2 ~~g~~vfEt~r~~~g--~~~~l~~Hl~RL~~Sa~~~l~~~~~-------------------~~~~~~~~~~~i~-~~~-- 57 (194)
T 3ceb_A 2 MWQFPLFETILIEQG--QAKNISYHQQRYEKSLLKFYPKMKL-------------------QPFDLAKIIAKHT-ALF-- 57 (194)
T ss_dssp CTTCCEEEEEEEETT--EECSHHHHHHHHHHHHHHHSTTCCC-------------------CCCCHHHHHHTCG-GGG--
T ss_pred CCCCeEEEEEEEECC--EecCHHHHHHHHHHHHHHHhCCCCC-------------------CCCCHHHHHHHHH-HHh--
Confidence 468999999999999 8999999999999999 99999411 2368888888877 664
Q ss_pred hcccchhhhhhcCCCcceEEEEEEEeeCCCCCCccCCCCCCCCcceEEEEEEecCCCccccccCCCceEEEecccccCcc
Q 021015 106 MNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGYVPFVFGVEGTGARLALVGRGRDVAE 185 (318)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~iri~v~g~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~~~~~~~~gv~l~~~~~~r~~~~ 185 (318)
.++..+++||++++++. ..+...|++|... .+ ..... ...+.
T Consensus 58 -----------~~~~~~~~iR~~~~~g~-------------------~~~~~~p~~~~~~----~~--~~~~~--~~~~~ 99 (194)
T 3ceb_A 58 -----------THREGLIRCRIDYNHHD-------------------YVLQCFPYQQKVY----RT--FKPVF--CDHID 99 (194)
T ss_dssp -----------SCSSSEEEEEEEECSSC-------------------EEEEEEEECCCCC----CC--EEEEE--CSSCC
T ss_pred -----------hCCCCCEEEEEEEeCCc-------------------cEEEEecCCCCcE----EE--EEEec--CCCcc
Confidence 34456899999998432 0122334433210 11 11111 12233
Q ss_pred ccccccccchhHHHhhCCCCCCEEEEeCCCCeEEecCcceEEEEEcCCCCchhhhhhhhcCCCCceEEEccCCCCCCccc
Q 021015 186 AKYSDWVRLRKPLEKLRPPSVTELLLSNDGDQLLEGSITNFFVVCRKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPG 265 (318)
Q Consensus 186 ~k~~~~~~~~~~l~~a~~~G~de~lL~~~g~~v~Eg~~sNiF~v~~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~G 265 (318)
...|+.++......+|+++|+||+++..+| +|+||+++|||++++|+ |+||| +|+|+|
T Consensus 100 ~~~Kt~n~~~~~~~~A~~~g~de~l~l~~G-~v~E~s~sNif~~~~g~-------------------l~TP~--~~~L~G 157 (194)
T 3ceb_A 100 YSLKFSDRTLLNNLLKQKEECDEIMIIRQG-KVTDCSIGNLIFRQNNQ-------------------WITPD--KPLLEG 157 (194)
T ss_dssp CSSCBSCCHHHHHHHGGGTTSSEEEEEETT-EECCCSSSEEEEEETTE-------------------EEEES--SCSSCC
T ss_pred hhhcccCHHHHHHHHHhhCCCCEEEEEeCC-EEEEeccEEEEEEECCE-------------------EECCC--CCCcCh
Confidence 444555554112224788999999433777 99999999999999997 99999 789999
Q ss_pred hHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce
Q 021015 266 VIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN 307 (318)
Q Consensus 266 itR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi 307 (318)
|||+.||+ +++|+|+.++++||.+|||+|+|||++|+
T Consensus 158 itR~~ll~-----~~~v~e~~i~~~eL~~adevfl~ns~~gi 194 (194)
T 3ceb_A 158 TQRAKLLE-----QKKIIAREIFFEDLAQYEEIRLINAMNGL 194 (194)
T ss_dssp HHHHHHHH-----TTSSEEECCBGGGGGGCSCEEEEBTTBCC
T ss_pred HHHHHHHc-----CCCEEEecCCHHHHhhccEEEEEecccCC
Confidence 99999998 68999999999999999999999999986
No 19
>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens}
Probab=70.75 E-value=4.7 Score=28.03 Aligned_cols=28 Identities=18% Similarity=0.419 Sum_probs=22.0
Q ss_pred CCCCEE-EEeCCCCeEEec--------CcceEEEEEcC
Q 021015 204 PSVTEL-LLSNDGDQLLEG--------SITNFFVVCRK 232 (318)
Q Consensus 204 ~G~de~-lL~~~g~~v~Eg--------~~sNiF~v~~~ 232 (318)
.|.+|+ ++-+|| .|... ..+|-|+|.+.
T Consensus 5 ~gIeEVnmfk~dg-~vihF~nPkVqaS~~aNTfvv~G~ 41 (58)
T 3mcb_B 5 SGIEEVNMFTNQG-TVIHFNNPKVQASLAANTFTITGH 41 (58)
T ss_dssp CCCCEEEEEETTS-EEEEEESCEEEEETTTTEEEEESC
T ss_pred CCeeEEEEEecCC-EEEEecCcceEEeeccceEEEecC
Confidence 478899 777788 76654 56999999876
No 20
>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo sapiens}
Probab=69.02 E-value=4.6 Score=28.86 Aligned_cols=44 Identities=20% Similarity=0.518 Sum_probs=30.7
Q ss_pred CCCCEE-EEeCCCCeEEec--------CcceEEEEEcCCCCchhhhhhhhcCCCCceEEEccCCCCCCccchHHH
Q 021015 204 PSVTEL-LLSNDGDQLLEG--------SITNFFVVCRKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQ 269 (318)
Q Consensus 204 ~G~de~-lL~~~g~~v~Eg--------~~sNiF~v~~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~ 269 (318)
.|.+|+ ++-+|| .|... ..+|-|+|.+. --|-++.+ .||||.-|
T Consensus 5 ~gIeEVnmfk~dg-~vihF~nPkVqaS~~aNT~vv~G~--------------------~e~K~l~e-llP~Il~q 57 (66)
T 3lkx_A 5 SGIEEVNMFTNQG-TVIHFNNPKVQASLAANTFTITGH--------------------AETKQLTE-MLPSILNQ 57 (66)
T ss_dssp CCEEEEEEEETTS-EEEEEESCEEEEECC-CEEEEESC--------------------EEEEEGGG-GTTGGGGG
T ss_pred CCeeEEEEEecCC-EEEEecCcceEEeeccCeeEecCC--------------------CEEeEHHH-HChhhhhc
Confidence 477888 777787 76665 66999999876 44445544 88888744
No 21
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=35.85 E-value=50 Score=25.75 Aligned_cols=45 Identities=9% Similarity=-0.014 Sum_probs=32.8
Q ss_pred CCCccchHH-HHHHHHHHhCCCcEEEE---------ecCHhhHhcccEEEEeccc
Q 021015 260 DGVLPGVIR-QLVIEVCRSKGIPIREL---------ASSWSQHELWKEAFITSVL 304 (318)
Q Consensus 260 ~giL~GitR-~~vl~~~~~~gi~v~E~---------~i~~~dL~~adE~Fltns~ 304 (318)
.|+-.-.|- +.+-..|+++|+++..+ .++.+|+..||-+++.+..
T Consensus 16 tGiAHTyMAAeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~ 70 (111)
T 2kyr_A 16 MGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAV 70 (111)
T ss_dssp SCHHHHHHHHHHHHHHHHHTSSEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS
T ss_pred CcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCcCCCCCHHHHHhCCEEEEEeCC
Confidence 344444443 34455788899988763 7999999999999998763
No 22
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=25.15 E-value=82 Score=24.29 Aligned_cols=45 Identities=9% Similarity=0.061 Sum_probs=33.1
Q ss_pred CCCccchHHHHHH-HHHHhCCCcEEEE---------ecCHhhHhcccEEEEeccc
Q 021015 260 DGVLPGVIRQLVI-EVCRSKGIPIREL---------ASSWSQHELWKEAFITSVL 304 (318)
Q Consensus 260 ~giL~GitR~~vl-~~~~~~gi~v~E~---------~i~~~dL~~adE~Fltns~ 304 (318)
.|+-...|-...| ..|+++|+.+..+ .++.+|+..||-+++.+..
T Consensus 13 tGiAhTymAaeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~ 67 (106)
T 2r48_A 13 NGIAHTYMAAENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADR 67 (106)
T ss_dssp SCSHHHHHHHHHHHHHHHHHTCEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS
T ss_pred CcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC
Confidence 4565665644444 4688899887663 6999999999999998653
No 23
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=23.98 E-value=81 Score=24.30 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=34.9
Q ss_pred EEccCCCCCCccchHHHHHHH-HHHhCCCcEEEE---------ecCHhhHhcccEEEEeccc
Q 021015 253 VQTAPISDGVLPGVIRQLVIE-VCRSKGIPIREL---------ASSWSQHELWKEAFITSVL 304 (318)
Q Consensus 253 l~TPpl~~giL~GitR~~vl~-~~~~~gi~v~E~---------~i~~~dL~~adE~Fltns~ 304 (318)
.+|.- ..|+-...|-...|+ .|+++|+.+..+ .++.+|+..||-+++.+..
T Consensus 7 aVTaC-ptGiAhTymAaeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~ 67 (106)
T 2r4q_A 7 AVTAC-PTGIAHTFMAADALKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADK 67 (106)
T ss_dssp EEEEC-SCC--CHHHHHHHHHHHHHHHTCCEEEEEEETTEEESCCCHHHHHHCSCEEEEESS
T ss_pred EEecC-CCcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCccCCCCHHHHHhCCEEEEEeCC
Confidence 44432 256666666554444 688899887763 6999999999999998653
No 24
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=23.74 E-value=83 Score=24.24 Aligned_cols=45 Identities=11% Similarity=0.021 Sum_probs=33.5
Q ss_pred CCCccchH-HHHHHHHHHhCCCcEEEE---------ecCHhhHhcccEEEEeccc
Q 021015 260 DGVLPGVI-RQLVIEVCRSKGIPIREL---------ASSWSQHELWKEAFITSVL 304 (318)
Q Consensus 260 ~giL~Git-R~~vl~~~~~~gi~v~E~---------~i~~~dL~~adE~Fltns~ 304 (318)
.|+=.-.| -+.+-+.|+++|+++.-+ .++.+|+..||-+++....
T Consensus 13 tGiAhTymAAeaLekaA~~~G~~ikVEtqgs~g~~n~Lt~~~I~~AD~VIia~d~ 67 (106)
T 2m1z_A 13 TGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDT 67 (106)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCEEEEEEEETTEESSCCCHHHHHHCSEEEEEESS
T ss_pred CcHHHHHHHHHHHHHHHHHCCCEEEEEEecCccccCCCCHHHHhhCCEEEEeccc
Confidence 45555555 456666788999887654 5778999999999998654
No 25
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=22.09 E-value=1.6e+02 Score=22.05 Aligned_cols=54 Identities=13% Similarity=0.071 Sum_probs=39.2
Q ss_pred CCccchHHHHHHHHHHhCCCcEEEEecCHhhHh----cccEEEEecccc-------------ceEEEEECc
Q 021015 261 GVLPGVIRQLVIEVCRSKGIPIRELASSWSQHE----LWKEAFITSVLL-------------FNVVTTIGH 314 (318)
Q Consensus 261 giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~----~adE~Fltns~~-------------gipV~~i~~ 314 (318)
|+=-++..+.+-+.+++.|++++-...+..++. ++|=+++|.-+. ++||..|+.
T Consensus 14 G~~TSll~~kl~~~~~~~gi~~~i~~~~~~~~~~~~~~~D~Ii~t~~l~~~~~~~~~~~~~~~~pv~~I~~ 84 (109)
T 2l2q_A 14 GMSTSMLVQRIEKYAKSKNINATIEAIAETRLSEVVDRFDVVLLAPQSRFNKKRLEEITKPKGIPIEIINT 84 (109)
T ss_dssp SCSSCHHHHHHHHHHHHHTCSEEEEEECSTTHHHHTTTCSEEEECSCCSSHHHHHHHHHHHHTCCEEECCH
T ss_pred hHhHHHHHHHHHHHHHHCCCCeEEEEecHHHHHhhcCCCCEEEECCccHHHHHHHHHHhcccCCCEEEECh
Confidence 444446677777888889998877777777664 678888877776 358877764
Done!