Query 021015
Match_columns 318
No_of_seqs 206 out of 1158
Neff 6.8
Searched_HMMs 13730
Date Mon Mar 25 11:30:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021015.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021015hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1iyea_ e.17.1.1 (A:) Branched 100.0 1.7E-49 1.2E-53 370.7 25.5 253 4-317 2-269 (304)
2 d1i2ka_ e.17.1.1 (A:) Aminodeo 100.0 1.4E-47 1E-51 351.5 28.2 243 6-318 1-253 (269)
3 d1daaa_ e.17.1.1 (A:) D-aminoa 100.0 4.6E-47 3.3E-51 348.5 25.7 248 6-317 2-256 (277)
4 d2a1ha1 e.17.1.1 (A:3-365) Bra 100.0 6.1E-43 4.4E-47 335.2 26.4 259 7-315 45-324 (363)
5 d2r48a1 c.44.2.2 (A:2-104) Man 33.1 23 0.0017 25.5 4.2 36 269-304 20-64 (103)
6 d2r4qa1 c.44.2.2 (A:171-273) F 31.3 24 0.0017 25.4 4.0 44 261-304 11-64 (103)
7 d5nula_ c.23.5.1 (A:) Flavodox 18.0 90 0.0066 22.0 5.3 41 265-305 10-56 (138)
8 d1ljra2 c.47.1.5 (A:1-79) Clas 17.2 26 0.0019 23.0 1.6 48 270-317 16-64 (79)
9 d2a5la1 c.23.5.8 (A:3-198) Trp 16.0 1E+02 0.0075 23.0 5.4 39 267-305 18-78 (196)
10 d1wdna_ c.94.1.1 (A:) Glutamin 15.4 50 0.0037 25.0 3.3 34 260-293 18-51 (223)
No 1
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.7e-49 Score=370.72 Aligned_cols=253 Identities=18% Similarity=0.187 Sum_probs=207.7
Q ss_pred ccEEEECCeEecCCCCCccccccCC---cceeEeeEEEEcCc--ccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 021015 4 TRIVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNG--SCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSG 78 (318)
Q Consensus 4 ~~~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~g~--~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~ 78 (318)
..++|+||+++ +.+++.+|++|++ |||+|||||+++|. ..+|+|++|++||.+||+.|+|+.
T Consensus 2 ~~~i~~nG~~~-~~~~a~i~~~d~g~~yGdgvFEt~r~~~g~~~~~lf~l~~Hl~RL~~Sa~~l~i~~------------ 68 (304)
T d1iyea_ 2 ADYIWFNGEMV-RWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVVFRHREHMQRLHDSAKIYRFPV------------ 68 (304)
T ss_dssp CSEEEETTEEE-EGGGCCCCTTCHHHHHCCEEECCEEEECCTTSSEEETHHHHHHHHHHHHHHHTCCC------------
T ss_pred CCEEEECCEEe-ehHHCccCccccHHhhceeeeecEEEEECCCCCeecCHHHHHHHHHHhcccccCCC------------
Confidence 46799999999 9999999999986 99999999999981 127899999999999999999943
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEee-CCCCCCccCCCCCCCCcceEEEEEE
Q 021015 79 LEPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGD-YGKLSGIENMGSDDFLGVFDVSVHF 157 (318)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~-~~~~~~~~~~g~~~~~~~~~~~v~~ 157 (318)
+.+.+.+.+.++++++. ++..+++||+.++++ +..++..+ ....+.+.+.+
T Consensus 69 ---------~~~~~~~~~~~~~~v~~-------------n~~~~~~vr~~~~~~~~~~~~~~~------~~~~~~~~~~~ 120 (304)
T d1iyea_ 69 ---------SQSIDELMEACRDVIRK-------------NNLTSAYIRPLIFVGDVGMGVNPP------AGYSTDVIIAA 120 (304)
T ss_dssp ---------CSCHHHHHHHHHHHHHH-------------TTCSSEEEEEEEEECSSCSSSSCC------TTCCEEEEEEE
T ss_pred ---------cchhhHHHHHHHHHHHh-------------cccccceEEEEeeecccccccCCc------cccccceeecc
Confidence 35788999999999853 566789999999844 34433332 22355666666
Q ss_pred ecCCCc-cccccCCCceEEEecccccCc----cccccccccchhHHH--hhCCCCCCEE-EEeCCCCeEEecCcceEEEE
Q 021015 158 SGYVPF-VFGVEGTGARLALVGRGRDVA----EAKYSDWVRLRKPLE--KLRPPSVTEL-LLSNDGDQLLEGSITNFFVV 229 (318)
Q Consensus 158 ~~~~~~-~~~~~~~gv~l~~~~~~r~~~----~~k~~~~~~~~~~l~--~a~~~G~de~-lL~~~g~~v~Eg~~sNiF~v 229 (318)
.|.... ....+..|+++.+....|..+ .++.++.++..+.++ +|+++|+||+ +++.+| +|+||+++|||+|
T Consensus 121 ~~~~~~~~~~~~~~gi~~~~~~~~r~~~~~~~~~~~k~~n~~~~~~a~~~A~~~g~deal~ld~~g-~v~E~s~sNif~v 199 (304)
T d1iyea_ 121 FPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVNG-YISEGAGENLFEV 199 (304)
T ss_dssp ECCCCTTCTTHHHHCEEEEECSSCCCCTTTSCTTSCBGGGHHHHHHHHHHHHHTTCSEEEEECTTS-BEEEETTBEEEEE
T ss_pred ccccccCChhhccCceEEEEeeccccCCCCcccccccccCccccchhhhHHHHcCCcceeeecccC-eEeecCceeEEEE
Confidence 666443 223345688988888777654 334445555555554 5889999999 566777 9999999999999
Q ss_pred EcCCCCchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-E
Q 021015 230 CRKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-V 308 (318)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-p 308 (318)
++++ |+|||+++|+|+||||+.|+++|+++|++|+|+.++++||.+|||+|+|||++|| |
T Consensus 200 k~~~-------------------l~TP~~~~~iL~GItR~~vi~~~~~~gi~v~e~~i~~~~L~~AdEvfltns~~gi~P 260 (304)
T d1iyea_ 200 KDGV-------------------LFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITP 260 (304)
T ss_dssp ETTE-------------------EEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCCBTTHHHHCSEEEEEETTTEEEE
T ss_pred eCCE-------------------EEEeecccccCCchHHHHHHHHhhhcccceeeccCCHHHHHhhCHHhhhCCCCeEEE
Confidence 9998 9999999999999999999999999999999999999999999999999999999 9
Q ss_pred EEEECceec
Q 021015 309 VTTIGHKNL 317 (318)
Q Consensus 309 V~~i~~~~~ 317 (318)
|++|+++.+
T Consensus 261 V~~id~~~~ 269 (304)
T d1iyea_ 261 VRSVDGIQV 269 (304)
T ss_dssp EEEETTEEC
T ss_pred EEEECCEEc
Confidence 999999986
No 2
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.4e-47 Score=351.49 Aligned_cols=243 Identities=20% Similarity=0.217 Sum_probs=195.4
Q ss_pred EEEECCeEecCCCCCccccccCC---cceeEeeEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCC
Q 021015 6 IVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEPI 82 (318)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~~ 82 (318)
|+|+||+. ++.+|++|+| |||+|||||+++| ++++|++|++||.+||+.|+|+.|
T Consensus 1 ~~~~NG~~-----~a~i~~~drg~~~G~gvFEt~r~~~g--~i~~l~~Hl~RL~~Sa~~l~i~~~--------------- 58 (269)
T d1i2ka_ 1 MFLINGHK-----QESLAVSDRATQFGDGCFTTARVIDG--KVSLLSAHIQRLQDACQRLMISCD--------------- 58 (269)
T ss_dssp CEEETTEE-----ESCCCTTCHHHHHCCEEEEEEEEETT--EETTHHHHHHHHHHHHHHTTCCCC---------------
T ss_pred CEEECCcc-----cceeCCCChHHHhhhhheeeEEEECC--EECCHHHHHHHHHHHHHHhhhhcc---------------
Confidence 58999974 3679999986 9999999999999 999999999999999999999432
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEee-CCCCCCccCCCCCCCCcceEEEEEEecCC
Q 021015 83 RTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGD-YGKLSGIENMGSDDFLGVFDVSVHFSGYV 161 (318)
Q Consensus 83 ~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~-~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 161 (318)
..+.+.+.+..++.. ..++++|+.++++ .+.++... ....+.+++.+.+++
T Consensus 59 -------~~~~~~~~i~~~~~~---------------~~~~~iri~v~~g~~~~~~~~~------~~~~~~~~~~~~~~~ 110 (269)
T d1i2ka_ 59 -------FWPQLEQEMKTLAAE---------------QQNGVLKVVISRGSGGRGYSTL------NSGPATRILSVTAYP 110 (269)
T ss_dssp -------CHHHHHHHHHHHHHH---------------HCSEEEEEEEECCSCCSTTCCT------TCCCCEEEEEEECCC
T ss_pred -------chHHHHHHHHHHhhc---------------cccceEEEeeecCCCccccccc------cccccceeEEeeccc
Confidence 245667777766642 1368999999944 44433321 122445666667776
Q ss_pred CccccccCCCceEEEecccccC--ccccccccccchhHHH--hhCCCCCCEE-EEeCCCCeEEecCcceEEEEEcCCCCc
Q 021015 162 PFVFGVEGTGARLALVGRGRDV--AEAKYSDWVRLRKPLE--KLRPPSVTEL-LLSNDGDQLLEGSITNFFVVCRKDNSE 236 (318)
Q Consensus 162 ~~~~~~~~~gv~l~~~~~~r~~--~~~k~~~~~~~~~~l~--~a~~~G~de~-lL~~~g~~v~Eg~~sNiF~v~~~~~~~ 236 (318)
......+..|+.+.+.+.++.. .....|+.++..+.++ +|+++|+||+ ++|.+| +|+||+++|||++++++
T Consensus 111 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~K~~~~~~~~~a~~~a~~~g~dd~llld~~g-~v~E~s~sNif~vk~~~--- 186 (269)
T d1i2ka_ 111 AHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNADEALVLDSEG-WVTECCAANLFWRKGNV--- 186 (269)
T ss_dssp SHHHHHHHHCEEEEECSCCBCCCTTTTBCCBSCCHHHHHHHHHHTTSSCSEEEEEBTTS-BEEECSSSEEEEEETTE---
T ss_pred cCchhhhhcccccccccceeccccccccccccccccccccccccccccccceeeecccc-hhhhccccceEEEeCCE---
Confidence 5544455678888887765533 2334455556555554 6899999999 556677 99999999999999998
Q ss_pred hhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-EEEEECce
Q 021015 237 AEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-VVTTIGHK 315 (318)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV~~i~~~ 315 (318)
|+|||++.|+||||||+.||++|++.|++|+|+.++++||.+|||+|+|||++|| ||++|+++
T Consensus 187 ----------------~~TP~~~~~~L~GitR~~li~l~~~~g~~v~e~~i~~~dL~~adE~fl~ns~~gi~PV~~i~~~ 250 (269)
T d1i2ka_ 187 ----------------VYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMPVMPVCACGDV 250 (269)
T ss_dssp ----------------EEEECCSSSSBCCHHHHHHHHHHHHSSSEEEEECCBHHHHHTCSEEEEECSSSCEEEEEEETTE
T ss_pred ----------------EEEeecccccccchHHHHHHHHHHHcCCeEEEEECCHHHHHhcchheeccchhheEEEEEECCE
Confidence 9999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred ecC
Q 021015 316 NLS 318 (318)
Q Consensus 316 ~~~ 318 (318)
.++
T Consensus 251 ~~~ 253 (269)
T d1i2ka_ 251 SFS 253 (269)
T ss_dssp ECC
T ss_pred Eec
Confidence 874
No 3
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]}
Probab=100.00 E-value=4.6e-47 Score=348.53 Aligned_cols=248 Identities=18% Similarity=0.204 Sum_probs=195.1
Q ss_pred EEEECCeEecCCCCCccccccCC---cceeEeeEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCC
Q 021015 6 IVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEPI 82 (318)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~~---G~G~FEt~rv~~g~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~~ 82 (318)
++|+||+++ +.+++.|+++|+| |||+|||||+++| ++++|++|++||.+||+.|+|+.|
T Consensus 2 ~~~~ng~~v-~~~~~~i~~~d~g~~~GdgvFEt~r~~~g--~~~~l~~Hl~RL~~Sa~~l~~~~p--------------- 63 (277)
T d1daaa_ 2 YTLWNDQIV-KDEEVKIDKEDRGYQFGDGVYEVVKVYNG--EMFTVNEHIDRLYASAEKIRITIP--------------- 63 (277)
T ss_dssp EEEETTEEE-EGGGCCBCTTBHHHHHCCEEEEEEEEETT--EESSHHHHHHHHHHHHHHTTCCCS---------------
T ss_pred EEEECCEEe-EHHHCccCCcchHhhhcceeeeeEEEECC--EECChHHHHHHHHHhhhhhhhccc---------------
Confidence 578999999 9999999999997 9999999999999 999999999999999999999543
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEE-eeCCCCCCccCCCCCCCCcceEEEEEEecCC
Q 021015 83 RTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVS-GDYGKLSGIENMGSDDFLGVFDVSVHFSGYV 161 (318)
Q Consensus 83 ~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~-g~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 161 (318)
.+.+.+...+.++++. ++...++||+.++ +..+.++..+ ......+++...+..
T Consensus 64 ------~~~~~~~~~~~~~~~~-------------n~~~~~~ir~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 118 (277)
T d1daaa_ 64 ------YTKDKFHQLLHELVEK-------------NELNTGHIYFQVTRGTSPRAHQFP------ENTVKPVIIGYTKEN 118 (277)
T ss_dssp ------SCHHHHHHHHHHHHHH-------------HTCCSEEEEEEEECCBCSSCSSCC------SSCCCCEEEEEEEEC
T ss_pred ------chHHHHHHHHHHHHHh-------------cccccceEEeeecccCCcccccCc------cccccceeEEeeccc
Confidence 4788999889998864 4456789999999 4343333332 111222333333322
Q ss_pred CccccccCCCceEEEecccccCccccccccccchhHHH--hhCCCCCCEEEEeCCCCeEEecCcceEEEEEcCCCCchhh
Q 021015 162 PFVFGVEGTGARLALVGRGRDVAEAKYSDWVRLRKPLE--KLRPPSVTELLLSNDGDQLLEGSITNFFVVCRKDNSEAED 239 (318)
Q Consensus 162 ~~~~~~~~~gv~l~~~~~~r~~~~~k~~~~~~~~~~l~--~a~~~G~de~lL~~~g~~v~Eg~~sNiF~v~~~~~~~~~~ 239 (318)
.........+.........+. ...+.|+.++..+.++ +|++.|+|+++++++| +|+||+++|||+|++++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~-~~~~~K~~~y~~~~~a~~~a~~~g~d~~l~~~~g-~v~E~~~sNvf~vk~~~------ 190 (277)
T d1daaa_ 119 PRPLENLEKGVKATFVEDIRW-LRCDIKSLNLLGAVLAKQEAHEKGCYEAILHRNN-TVTEGSSSNVFGIKDGI------ 190 (277)
T ss_dssp CCCHHHHHHCEEEEEEECCCC-SCTTSCBSCCHHHHHHHHHHHHTTCSEEEEEETT-EEEEETTBEEEEEETTE------
T ss_pred ccccccccccccccccccccc-cCCccCccCcchhhhhhhhHhhcCCcceeeecCC-cceecccceEEEEECCE------
Confidence 221111223444433333222 2233455566655554 5788999999888888 99999999999999998
Q ss_pred hhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-EEEEECceec
Q 021015 240 KFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-VVTTIGHKNL 317 (318)
Q Consensus 240 ~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV~~i~~~~~ 317 (318)
++|||+++|+|+||||+.|+++|+++|++|+|+.++++||.+|||+|+|||++|| ||.+||++.+
T Consensus 191 -------------~~tPp~~~giL~GitR~~v~~la~~~g~~v~e~~i~~~dL~~adEvfltns~~gv~PV~~id~~~i 256 (277)
T d1daaa_ 191 -------------LYTHPANNMILKGITRDVVIACANEINMPVKEIPFTTHEALKMDELFVTSTTSEITPVIEIDGKLI 256 (277)
T ss_dssp -------------EEECCSSTTSCCCHHHHHHHHHHHHTTCCEECCCCBHHHHHTCSEEEEEETTTEEEEEEEETTEES
T ss_pred -------------EEecCCccccccCHhHhhhhhhhhhccccceEeeCCHHHHHhCccceeccCcccEEEEEEECCEEc
Confidence 9999999999999999999999999999999999999999999999999999999 9999999987
No 4
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Probab=100.00 E-value=6.1e-43 Score=335.18 Aligned_cols=259 Identities=17% Similarity=0.101 Sum_probs=194.8
Q ss_pred EEECCeEecCCCCCccccccC---CcceeEeeEEEEcC---cccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q 021015 7 VFSNGVVSQASDTPSVSTFLQ---ERRGAYTTTRTHNN---GSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLE 80 (318)
Q Consensus 7 ~~~nG~~~~~~~~~~is~~~~---~G~G~FEt~rv~~g---~~~i~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~ 80 (318)
.|.||+++ |.+++.+|++++ ||+|+|||||+|+| +..+|+|++|++||.+||+.+.++
T Consensus 45 ~W~ng~iv-p~~~~~isp~~~~l~YG~gvFEgiR~y~~~~g~i~lFrld~Hl~RL~~Sa~~l~~~--------------- 108 (363)
T d2a1ha1 45 GWGQPRIQ-PFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLP--------------- 108 (363)
T ss_dssp EECCCEEE-ESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC---------------
T ss_pred eeeCCEEe-EcccceeCcchhhccccceeeeeEEEEECCCCCEEEEccHHHHHHHHHHHHHhCCC---------------
Confidence 49999999 999999999987 59999999999987 112789999999999999999883
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhhhcccchhhhhhcCCCcceEEEEEEEeeCCCCCCccCCCCCCCCcceEEEEEEecC
Q 021015 81 PIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGY 160 (318)
Q Consensus 81 ~~~~~~~~~~~~~l~~~i~~li~~~~~~~~~~~~~~~~~~~~~~iri~v~g~~~~~~~~~~~g~~~~~~~~~~~v~~~~~ 160 (318)
+++.+++.+.|.++++.+... + +.++....+||++++++.+.. |..++ .....++.+.+.
T Consensus 109 -------~~~~~~~~~~i~~~v~~n~~~-v-----~~~~~~~~yiR~~v~~~~~~~------~~~~~-~~~~~~vi~~~~ 168 (363)
T d2a1ha1 109 -------SFDKLELLECIRRLIEVDKDW-V-----PDAAGTSLYVRPVLIGNEPSL------GVSQP-RRALLFVILCPV 168 (363)
T ss_dssp -------CCCHHHHHHHHHHHHHHTGGG-S-----CCSTTCEEEEEEEEEECCBCC------SCSCC-SEEEEEEEEEEE
T ss_pred -------CCChHHHHHHHHHHHHHHHhh-c-----cccccccEEEEEeeccCCccc------cccCC-cccceeEEEeec
Confidence 247889999999999865432 1 234567889999999654321 11211 233344444454
Q ss_pred CCccccccCCCceEEEec-ccccCccc--cc-cccccchhHHH--hhCCCCCCEE-EEeCCCCeEEecCcceEEEEEcCC
Q 021015 161 VPFVFGVEGTGARLALVG-RGRDVAEA--KY-SDWVRLRKPLE--KLRPPSVTEL-LLSNDGDQLLEGSITNFFVVCRKD 233 (318)
Q Consensus 161 ~~~~~~~~~~gv~l~~~~-~~r~~~~~--k~-~~~~~~~~~l~--~a~~~G~de~-lL~~~g~~v~Eg~~sNiF~v~~~~ 233 (318)
.+........+..+.+.. ..|..+.. .. +..++..+.++ +|+++|++|+ +|+++++.|+|++++|+|++++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~dg~v~E~~~sNiF~v~~~k 248 (363)
T d2a1ha1 169 GAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHE 248 (363)
T ss_dssp CCSSSSSSCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETTTTEEEEETTEEEEEEEECT
T ss_pred cccCccccccceeEEEeeeccccCccccccccccccccchhhHHHHhhcCCceeeeecccccceEEeccceEEEEEEecC
Confidence 433222222455555543 34433321 11 22334444444 6889999999 677543399999999999999875
Q ss_pred CCchhhhhhhhcCCCCceEEEccCCCCCCccchHHHHHHHHHHhCC-CcEEEEecCHhhHhcc------cEEEEeccccc
Q 021015 234 NSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKG-IPIRELASSWSQHELW------KEAFITSVLLF 306 (318)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~TPpl~~giL~GitR~~vl~~~~~~g-i~v~E~~i~~~dL~~a------dE~Fltns~~g 306 (318)
+|..+++|||++.+|||||||+.||++|+++| |+|+|+.++++||.+| ||||+|||+.+
T Consensus 249 --------------dG~~~l~tppl~~~ILpGITR~~Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~ 314 (363)
T d2a1ha1 249 --------------DGVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQ 314 (363)
T ss_dssp --------------TSCEEEEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTE
T ss_pred --------------CCcEEEEeccccccccCchHHHHHHHHHHHcCCCceeecCCCHHHHHhHhhcCCccEEEEcCCCcE
Confidence 57778999999999999999999999999997 9999999999999999 99999999999
Q ss_pred e-EEEEECce
Q 021015 307 N-VVTTIGHK 315 (318)
Q Consensus 307 i-pV~~i~~~ 315 (318)
| ||.+|+++
T Consensus 315 I~PV~~I~~~ 324 (363)
T d2a1ha1 315 VCPVHRILYK 324 (363)
T ss_dssp EEEEEEEEET
T ss_pred EEEEEEEEeC
Confidence 9 99999643
No 5
>d2r48a1 c.44.2.2 (A:2-104) Mannose-specific enzyme IIBCA component ManP, N-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=33.08 E-value=23 Score=25.46 Aligned_cols=36 Identities=8% Similarity=-0.001 Sum_probs=28.7
Q ss_pred HHHHHHHHhCCCcEEEE---------ecCHhhHhcccEEEEeccc
Q 021015 269 QLVIEVCRSKGIPIREL---------ASSWSQHELWKEAFITSVL 304 (318)
Q Consensus 269 ~~vl~~~~~~gi~v~E~---------~i~~~dL~~adE~Fltns~ 304 (318)
+.+-..|+++|+.+.-+ .++.+|+.+||-+++.+..
T Consensus 20 eaLe~aa~~~G~~ikVEtqGa~G~~n~Lt~~dI~~Ad~VIlA~D~ 64 (103)
T d2r48a1 20 ENLQKAADRLGVSIKVETQGGIGVENKLTEEEIREADAIIIAADR 64 (103)
T ss_dssp HHHHHHHHHHTCEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS
T ss_pred HHHHHHHHHcCCeEEEEeCCCCCCCCCCCHHHHHhCCEEEEEecc
Confidence 45555788899877654 7999999999999998753
No 6
>d2r4qa1 c.44.2.2 (A:171-273) Fructose-specific enzyme IIABC component FruA, middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=31.34 E-value=24 Score=25.42 Aligned_cols=44 Identities=11% Similarity=0.089 Sum_probs=31.2
Q ss_pred CCccchHHH-HHHHHHHhCCCcEEEE---------ecCHhhHhcccEEEEeccc
Q 021015 261 GVLPGVIRQ-LVIEVCRSKGIPIREL---------ASSWSQHELWKEAFITSVL 304 (318)
Q Consensus 261 giL~GitR~-~vl~~~~~~gi~v~E~---------~i~~~dL~~adE~Fltns~ 304 (318)
|+=.-.|-. .+-..|+++|+.+.-+ .++.+|+..||-+++.+..
T Consensus 11 GiAHTymAAeaLe~aa~~~G~~ikVEtqGs~Gi~n~Lt~~~I~~Ad~VIiA~D~ 64 (103)
T d2r4qa1 11 GIAHTFMAADALKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADK 64 (103)
T ss_dssp C--CHHHHHHHHHHHHHHHTCCEEEEEEETTEEESCCCHHHHHHCSCEEEEESS
T ss_pred chhHHHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCHHHHHhCCEEEEEecC
Confidence 444444444 4445788899887644 7999999999999998754
No 7
>d5nula_ c.23.5.1 (A:) Flavodoxin {Clostridium beijerinckii [TaxId: 1520]}
Probab=18.04 E-value=90 Score=21.99 Aligned_cols=41 Identities=5% Similarity=0.010 Sum_probs=30.3
Q ss_pred chHHHHHHHH---HHhCCCcEEEEec---CHhhHhcccEEEEecccc
Q 021015 265 GVIRQLVIEV---CRSKGIPIRELAS---SWSQHELWKEAFITSVLL 305 (318)
Q Consensus 265 GitR~~vl~~---~~~~gi~v~E~~i---~~~dL~~adE~Fltns~~ 305 (318)
|-|++..-.+ +.+.|+.|+-.++ +++++.++|.+++.+++.
T Consensus 10 GnT~~vA~~ia~~l~~~g~~v~~~~~~~~~~~~l~~~~~~i~g~pt~ 56 (138)
T d5nula_ 10 GNTEKMAELIAKGIIESGKDVNTINVSDVNIDELLNEDILILGCSAM 56 (138)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCEEEEGGGCCHHHHTTCSEEEEEECCB
T ss_pred hHHHHHHHHHHHHHHhcCCcceecccccccccccccCCeEEEEEecc
Confidence 7787554444 4567888877764 678899999999977666
No 8
>d1ljra2 c.47.1.5 (A:1-79) Class theta GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.20 E-value=26 Score=23.01 Aligned_cols=48 Identities=17% Similarity=0.120 Sum_probs=31.9
Q ss_pred HHHHHHHhCCCcEEEEecCHhhHhcccEEEEeccccce-EEEEECceec
Q 021015 270 LVIEVCRSKGIPIRELASSWSQHELWKEAFITSVLLFN-VVTTIGHKNL 317 (318)
Q Consensus 270 ~vl~~~~~~gi~v~E~~i~~~dL~~adE~Fltns~~gi-pV~~i~~~~~ 317 (318)
.|.-++..+|++++...+.+..=....+.|..-.-.|- ||-.-++..+
T Consensus 16 ~v~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~np~g~vP~L~d~~~~l 64 (79)
T d1ljra2 16 AVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFIL 64 (79)
T ss_dssp HHHHHHHHTTCCCEEEECCTTTTGGGSHHHHTTCTTCCSCEEEETTEEE
T ss_pred HHHHHHHHhCCCCEEEeeeccccccCCHHHHHhhhhcceeEEEeCCcEE
Confidence 34445677899999998876554444445555555566 9887777654
No 9
>d2a5la1 c.23.5.8 (A:3-198) Trp repressor binding protein WrbA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=15.96 E-value=1e+02 Score=23.01 Aligned_cols=39 Identities=8% Similarity=-0.012 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCcEEEEec----------------------CHhhHhcccEEEEecccc
Q 021015 267 IRQLVIEVCRSKGIPIRELAS----------------------SWSQHELWKEAFITSVLL 305 (318)
Q Consensus 267 tR~~vl~~~~~~gi~v~E~~i----------------------~~~dL~~adE~Fltns~~ 305 (318)
+-+.+.+-+++.|++++...+ .++++.++|.+++.+-+.
T Consensus 18 la~~i~~g~~~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~D~ii~gsP~y 78 (196)
T d2a5la1 18 MARQIARGVEQGGFEARVRTVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTR 78 (196)
T ss_dssp HHHHHHHHHHHTTCEEEEEBCCCEEC-------------CCBCCHHHHHTCSEEEEEEECB
T ss_pred HHHHHHHHHhhcCCEEEEEeccccchHHHHhccccccccccccchhhhhhcCEEEEecchh
Confidence 334555667778998888776 478999999999987665
No 10
>d1wdna_ c.94.1.1 (A:) Glutamine-binding protein {Escherichia coli [TaxId: 562]}
Probab=15.42 E-value=50 Score=24.99 Aligned_cols=34 Identities=9% Similarity=0.023 Sum_probs=29.7
Q ss_pred CCCccchHHHHHHHHHHhCCCcEEEEecCHhhHh
Q 021015 260 DGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHE 293 (318)
Q Consensus 260 ~giL~GitR~~vl~~~~~~gi~v~E~~i~~~dL~ 293 (318)
+|-+.|+.-+.+-++++++|++++-...++..+.
T Consensus 18 ~g~~~G~~~dl~~~i~~~~g~~~~~~~~~~~~~~ 51 (223)
T d1wdna_ 18 GDLYVGFDVDLWAAIAKELKLDYELKPMDFSGII 51 (223)
T ss_dssp TTEEESHHHHHHHHHHHHHTCCEEEEEECGGGHH
T ss_pred CCeEEEHHHHHHHHHHHHhCCcEEEEecCHHHHH
Confidence 6778899999999999999999999988887754
Done!