BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021016
(318 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 105/227 (46%), Gaps = 50/227 (22%)
Query: 89 RCAHFAIFDGHGGRLAAEYAQKRLHA---NVISAGLPRFRKT--------DESLLQESV- 136
+C+ FA++DGHGG A+Y L V + G F K D +LLQE V
Sbjct: 50 QCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVI 109
Query: 137 ------SG---------GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHL 181
SG G G TAV + G+ ++VAN GD++ VV R+
Sbjct: 110 EELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNG--------- 160
Query: 182 DELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK----- 236
KA+ ++ HK E RI+K+GG V+ +GR+ G L +SRA GD +K
Sbjct: 161 ------KALEMSFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSL 214
Query: 237 ---KFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
+ + A PDI V D F++L CDG+W V+FVQ+
Sbjct: 215 PAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQE 261
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 104/230 (45%), Gaps = 45/230 (19%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------SAGLPR-----------FRKTDESL--L 132
FA++DGH G A+Y + L ++ SAG P F + DE + +
Sbjct: 56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVM 115
Query: 133 QESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVV 192
E G + G+TAV + I + + N GD++ ++ R+ K
Sbjct: 116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFF 160
Query: 193 TRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATP 244
T+ HK P E+ RIQ +GG+V R+ G L VSRA GD +K V P
Sbjct: 161 TQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEP 219
Query: 245 DIHSFEVTERD-HFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQ 293
++H E +E D FIIL CDG+W V G + +FV+ L+VT C
Sbjct: 220 EVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCN 269
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 104/230 (45%), Gaps = 45/230 (19%)
Query: 93 FAIFDGHGGRLAAEYAQKRLHANVI-------SAGLPR-----------FRKTDESL--L 132
FA++DGH G A+Y + L ++ SAG P F + DE + +
Sbjct: 56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVM 115
Query: 133 QESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVV 192
E G + G+TAV + I + + N GD++ ++ R+ K
Sbjct: 116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFF 160
Query: 193 TRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATP 244
T+ HK P E+ RIQ +GG+V R+ G L VSRA GD +K V P
Sbjct: 161 TQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEP 219
Query: 245 DIHSFEVTERD-HFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQ 293
++H E +E D FIIL CDG+W V G + +FV+ L+VT C
Sbjct: 220 EVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCN 269
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 98/234 (41%), Gaps = 49/234 (20%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH-----------------------ANVISAGLPRFRKTDE 129
FA++DGH G A Y L NV + F K DE
Sbjct: 58 FAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDE 117
Query: 130 SL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSL 187
+ + +G + G+TAV + I + ++ N GD++AV+ R+ V
Sbjct: 118 YMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQV------------- 164
Query: 188 KAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG-------- 239
T+ HK P+E+ RIQ +GG+V R+ G L VSRA GD +K
Sbjct: 165 --CFSTQDHKPCNPREKERIQNAGGSVMIQ-RVNGSLAVSRALGDYDYKCVDGKGPTEQL 221
Query: 240 VVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQ 293
V P+++ E D FIIL DG+W V + E+V+ L+V+ C
Sbjct: 222 VSPEPEVYEILRAEEDEFIILAXDGIWDVMSNEELCEYVKSRLEVSDDLENVCN 275
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 48/214 (22%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---ANVISAGLPRFRKTD--------------------- 128
F ++DGHGG A Y ++R+H A I+ P D
Sbjct: 55 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEI 114
Query: 129 ESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLK 188
ES+ E+V G+T+V + +FVAN GD++AV+ R
Sbjct: 115 ESVAPETV------GSTSVVAVVFPSHIFVANCGDSRAVLCRGKT--------------- 153
Query: 189 AIVVTRVHKAIYPQERARIQKSGGTVSS-NG-RLQGRLEVSRAFGDRQFKKFGVVATPDI 246
A+ ++ HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P++
Sbjct: 154 ALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPEV 212
Query: 247 HSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
+ + + D +IL DG+W V +A E +K
Sbjct: 213 TAVKRVKEDDCLILASDGVWDVMTDEEACEMARK 246
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 48/214 (22%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---ANVISAGLP------------------RFRKTD--- 128
F ++DGHGG A Y ++R+H A I+ P F + D
Sbjct: 58 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEI 117
Query: 129 ESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLK 188
ES+ E+V G+T+V + +FVAN GD++AV+ R
Sbjct: 118 ESVAPETV------GSTSVVAVVFPSHIFVANCGDSRAVLCRGKT--------------- 156
Query: 189 AIVVTRVHKAIYPQERARIQKSGGTVSS-NG-RLQGRLEVSRAFGDRQFKKFGVVATPDI 246
A+ ++ HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P++
Sbjct: 157 ALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPEV 215
Query: 247 HSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
+ + + D +IL DG+W V +A E +K
Sbjct: 216 TAVKRVKEDDCLILASDGVWDVMTDEEACEMARK 249
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 48/214 (22%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH---ANVISAGLPRFRKTD--------------------- 128
F ++DGHGG A Y ++R+H A I+ P D
Sbjct: 70 FGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEI 129
Query: 129 ESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLK 188
ES+ E+V G+T+V + +FVAN GD++AV+ R
Sbjct: 130 ESVAPETV------GSTSVVAVVFPSHIFVANCGDSRAVLCRGKT--------------- 168
Query: 189 AIVVTRVHKAIYPQERARIQKSGGTVSS-NG-RLQGRLEVSRAFGDRQFKKFGVVATPDI 246
A+ ++ HK E ARI+ +GG V NG R+ G L +SR+ GDR K ++ P++
Sbjct: 169 ALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPEV 227
Query: 247 HSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
+ + + D +IL DG+W V +A E +K
Sbjct: 228 TAVKRVKEDDCLILASDGVWDVMTDEEACEMARK 261
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 38/217 (17%)
Query: 86 PNLRCAHFAIFDGHGGRLAAEYAQKRLHANV---ISAGLPRFRKTD-------------- 128
P+L F ++DGHGG A Y ++R+H + I P F D
Sbjct: 55 PHLSAHFFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSF 114
Query: 129 ---ESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELS 185
+S ++ G+T+V + +FVAN GD++AV+ R
Sbjct: 115 MRVDSEIETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKT------------ 162
Query: 186 SLKAIVVTRVHKAIYPQERARIQKSGGTVS--SNGRLQGRLEVSRAFGDRQFKKFGVVAT 243
+ ++ HK E ARI+ +GG V + R+ G L +SR+ GDR K V+
Sbjct: 163 ---PLALSVDHKPDRDDEAARIEAAGGKVIRWNGARVFGVLAMSRSIGDRYLKP-SVIPD 218
Query: 244 PDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
P++ S + D +IL DGLW V + + +K
Sbjct: 219 PEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARK 255
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 39/211 (18%)
Query: 92 HFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLL---------------QESV 136
+FA++DGHGG AA++ + ++ LP+ K E+LL + S
Sbjct: 151 YFAVYDGHGGPAAADFCHTHMEKCIMDL-LPK-EKNLETLLTLAFLEIDKAFSSHARLSA 208
Query: 137 SGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTR 194
T + +L G + VA++GD++A++ R K + +T
Sbjct: 209 DATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------KPMKLTI 253
Query: 195 VHKAIYPQERARIQKSGGTVSSNG----RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFE 250
H E+ RI+K GG V+ N + GRL ++R+ GD K GV+A P+ +
Sbjct: 254 DHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIK 313
Query: 251 VTE-RDHFIILGCDGLWGVFGPSDAVEFVQK 280
+ D F++L DG+ + + +FV +
Sbjct: 314 LHHADDSFLVLTTDGINFMVNSQEICDFVNQ 344
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 39/211 (18%)
Query: 92 HFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLL---------------QESV 136
+FA++DGHGG AA++ + ++ LP+ K E+LL + S
Sbjct: 37 YFAVYDGHGGPAAADFCHTHMEKCIMDL-LPK-EKNLETLLTLAFLEIDKAFSSHARLSA 94
Query: 137 SGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTR 194
T + +L G + VA++GD++A++ R K + +T
Sbjct: 95 DATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKG---------------KPMKLTI 139
Query: 195 VHKAIYPQERARIQKSGGTVSSNG----RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFE 250
H E+ RI+K GG V+ N + GRL ++R+ GD K GV+A P+ +
Sbjct: 140 DHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIK 199
Query: 251 VTER-DHFIILGCDGLWGVFGPSDAVEFVQK 280
+ D F++L DG+ + + +FV +
Sbjct: 200 LHHADDSFLVLTTDGINFMVNSQEICDFVNQ 230
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 91/233 (39%), Gaps = 67/233 (28%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH--------------------------------------- 113
F ++DGHGG A+Y + RLH
Sbjct: 71 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 130
Query: 114 ----ANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 169
+ A + K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 131 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 184
Query: 170 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS--NGRLQGRLEVS 227
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 185 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 229
Query: 228 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 230 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 281
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 91/233 (39%), Gaps = 67/233 (28%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH--------------------------------------- 113
F ++DGHGG A+Y + RLH
Sbjct: 78 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 137
Query: 114 ----ANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 169
+ A + K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 138 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 191
Query: 170 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS--NGRLQGRLEVS 227
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 192 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 236
Query: 228 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 237 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 288
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 91/233 (39%), Gaps = 67/233 (28%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH--------------------------------------- 113
F ++DGHGG A+Y + RLH
Sbjct: 54 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 113
Query: 114 ----ANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 169
+ A + K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 114 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 167
Query: 170 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS--NGRLQGRLEVS 227
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 168 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 212
Query: 228 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 213 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 264
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 91/233 (39%), Gaps = 67/233 (28%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH--------------------------------------- 113
F ++DGHGG A+Y + RLH
Sbjct: 68 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTVD 127
Query: 114 ----ANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 169
+ A + K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 128 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 181
Query: 170 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS--NGRLQGRLEVS 227
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 182 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 226
Query: 228 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 227 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 278
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 91/233 (39%), Gaps = 67/233 (28%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH--------------------------------------- 113
F ++DGHGG A+Y + RLH
Sbjct: 65 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 124
Query: 114 ----ANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 169
+ A + K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 125 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 178
Query: 170 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS--NGRLQGRLEVS 227
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 179 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 223
Query: 228 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 224 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 275
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 91/233 (39%), Gaps = 67/233 (28%)
Query: 93 FAIFDGHGGRLAAEYAQKRLH--------------------------------------- 113
F ++DGHGG A+Y + RLH
Sbjct: 69 FGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVD 128
Query: 114 ----ANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVA 169
+ A + K E++ E+V G+TAV + + V+N GD++AV+
Sbjct: 129 GEIEGKIGRAVVGSSDKVLEAVASETV------GSTAVVALVCSSHIVVSNCGDSRAVLF 182
Query: 170 RSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSS--NGRLQGRLEVS 227
R +A+ ++ HK E ARI+ +GG V R+ G L +S
Sbjct: 183 RGK---------------EAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMS 227
Query: 228 RAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQK 280
R+ GDR K + V+ P++ + D +IL DGLW V + E ++
Sbjct: 228 RSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARR 279
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 66/244 (27%)
Query: 90 CAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDE----------------SLLQ 133
CA F +FDG G A+E + + +IS+ P +++ E LL
Sbjct: 53 CAFFGVFDGTVGDFASENVKDLVVPQLISS--PAWQEVTEXLRSDVPATEVDEKLPQLLD 110
Query: 134 ESVSGGWQDG-----------------ATAVCIWILGRTVFVANIGDAKAVVARSSIVDG 176
++V +++ +T+V + V V ++GD++ I G
Sbjct: 111 QAVDDXYKNADNELVKXCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSR-------IAXG 163
Query: 177 SNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV--------------------SS 216
++ + L +T HK P E+ RI ++GG+V S
Sbjct: 164 ----VETPNGLNCEFLTVDHKPDXPHEKLRIXRNGGSVEYLHNHNNKPFIRGGDFSFRKS 219
Query: 217 NGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVE 276
G +L+ SRAFG + K +G+ PD+ VT + IL DGLW V + AVE
Sbjct: 220 RGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAVE 279
Query: 277 FVQK 280
+
Sbjct: 280 IAXQ 283
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 25/121 (20%)
Query: 156 VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVS 215
V NIGD++A + S DG L ++ HK +P E +RI+K+GG+V
Sbjct: 175 VTAINIGDSRATLIHS---DGGLTRL-----------SKDHKPNHPTEASRIEKAGGSVE 220
Query: 216 S--NGRLQGRLEVSRAFGDRQFK--------KFGVVATPDIHSFEVTERDHFIILGCDGL 265
+ R+ G L +SRAFGD FK + V+A PD+ F ++L CDG+
Sbjct: 221 TFDVPRVDGVLALSRAFGDSDFKXNPNLPPEEQKVIAVPDVRQF-YALSSDLLLLACDGV 279
Query: 266 W 266
+
Sbjct: 280 Y 280
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 69/182 (37%), Gaps = 47/182 (25%)
Query: 143 GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 202
GATA + G + VAN GD++A++ +E S A+ ++ H A +
Sbjct: 200 GATACVAHVDGVDLHVANTGDSRAMLGVQ----------EEDGSWSAVTLSNDHNAQNER 249
Query: 203 ERARIQ-----KSGGTVSSNGRLQGRLEVSRAFGDRQFK--------------------- 236
E R++ +V RL G L RAFGD +FK
Sbjct: 250 ELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNE 309
Query: 237 --KF---------GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVT 285
KF + A P++ + +D F++L DGLW D V V + L
Sbjct: 310 YTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGM 369
Query: 286 AH 287
H
Sbjct: 370 HH 371
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 69/182 (37%), Gaps = 47/182 (25%)
Query: 143 GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQ 202
GATA + G + VAN GD++A++ +E S A+ ++ H A +
Sbjct: 200 GATACVAHVDGVDLHVANTGDSRAMLGVQ----------EEDGSWSAVTLSNDHNAQNER 249
Query: 203 ERARIQ-----KSGGTVSSNGRLQGRLEVSRAFGDRQFK--------------------- 236
E R++ +V RL G L RAFGD +FK
Sbjct: 250 EVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNE 309
Query: 237 --KF---------GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVT 285
KF + A P++ + +D F++L DGLW D V V + L
Sbjct: 310 YTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGM 369
Query: 286 AH 287
H
Sbjct: 370 HH 371
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 27/126 (21%)
Query: 155 TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTV 214
T+ VA++G+++ V+ S AI ++ H A +ER R+Q +GG
Sbjct: 167 TIHVASLGNSRCVLK---------------SGRTAIHLSTPHTASSHKERHRVQAAGGVF 211
Query: 215 SS-NGRL--QGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILGCD 263
++ NG L G + +RAFG FKK G V A PD+ +F D I+ G
Sbjct: 212 TTVNGELLLGGVVPXTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGDD-IVAGTA 270
Query: 264 GLWGVF 269
G + F
Sbjct: 271 GAFAHF 276
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 41/185 (22%)
Query: 122 PRFRKTDESL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNN 179
P+++K E L L+ +SGG A AV +L ++VAN+G +A++ +S+ VDG
Sbjct: 148 PQYQKILERLKTLEREISGG----AMAVVAVLLNNKLYVANVGTNRALLCKST-VDG--- 199
Query: 180 HLDELSSLKAIVVTRVHKAIYPQERARIQKSG---GTVSSNGRLQGRLEVSRAFGDRQFK 236
L+ + H E R+ + G G + G + G+ E +R GD +
Sbjct: 200 -------LQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQ-ESTRRIGDYKV- 250
Query: 237 KFG--------------VVATPDIHSFEVTER-DHFIILGCDGLWGVF----GPSDAVEF 277
K+G ++A P+IH + + F++L +GL+ GP A +
Sbjct: 251 KYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQE 310
Query: 278 VQKLL 282
+ ++
Sbjct: 311 IAAMI 315
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 41/185 (22%)
Query: 122 PRFRKTDESL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNN 179
P+++K E L L+ +SGG A AV +L ++VAN+G +A++ +S+ VDG
Sbjct: 146 PQYQKILERLKTLEREISGG----AMAVVAVLLNNKLYVANVGTNRALLCKST-VDG--- 197
Query: 180 HLDELSSLKAIVVTRVHKAIYPQERARIQKSG---GTVSSNGRLQGRLEVSRAFGDRQFK 236
L+ + H E R+ + G G + G + G+ E +R GD +
Sbjct: 198 -------LQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQ-ESTRRIGDYKV- 248
Query: 237 KFG--------------VVATPDIHSFEVTER-DHFIILGCDGLWGVF----GPSDAVEF 277
K+G ++A P+IH + + F++L +GL+ GP A +
Sbjct: 249 KYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQE 308
Query: 278 VQKLL 282
+ ++
Sbjct: 309 IAAMI 313
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 74/250 (29%)
Query: 90 CAHFAIFDGHGG---------RLAAEYAQKRLHANVISAGLPR-------------FRKT 127
C + +F+G+ G RL+AE +L+A A + R
Sbjct: 64 CFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESI 123
Query: 128 DESL-------------LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIV 174
D++L L+ +SGG A AV +L ++VAN+G +A++ +S+ V
Sbjct: 124 DDALAEKASLQLERLKTLEREISGG----AMAVVAVLLNNKLYVANVGTNRALLCKST-V 178
Query: 175 DGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSG---GTVSSNGRLQGRLEVSRAFG 231
DG L+ + H E R+ + G G + G + G+ E +R G
Sbjct: 179 DG----------LQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQ-ESTRRIG 227
Query: 232 DRQFKKFG--------------VVATPDIHSFEVTER-DHFIILGCDGLWGVF----GPS 272
D + K+G ++A P+IH + + F++L +GL+ GP
Sbjct: 228 DYKV-KYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPG 286
Query: 273 DAVEFVQKLL 282
A + + ++
Sbjct: 287 QANQEIAAMI 296
>pdb|1YEN|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Oxy (2mm Ihp, 20% Peg) (10 Test Sets)
pdb|1YEN|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Oxy (2mm Ihp, 20% Peg) (10 Test Sets)
pdb|1Y45|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Deoxy Low-Salt (10 Test Sets)
pdb|1Y45|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betap36a Deoxy Low-Salt (10 Test Sets)
Length = 146
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 199 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 245
+ P+E++ + G V+ + G GRL V A+ R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYAWTQRFFESFGDLSTPD 52
>pdb|1NQP|B Chain B, Crystal Structure Of Human Hemoglobin E At 1.73 A
Resolution
pdb|1NQP|D Chain D, Crystal Structure Of Human Hemoglobin E At 1.73 A
Resolution
pdb|1YVQ|B Chain B, The Low Salt (Peg) Crystal Structure Of Co Hemoglobin E
(Betae26k) Approaching Physiological Ph (Ph 7.5)
pdb|1YVQ|D Chain D, The Low Salt (Peg) Crystal Structure Of Co Hemoglobin E
(Betae26k) Approaching Physiological Ph (Ph 7.5)
pdb|1YVT|B Chain B, The High Salt (Phosphate) Crystal Structure Of Co
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
pdb|3DUT|B Chain B, The High Salt (Phosphate) Crystal Structure Of Deoxy
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
pdb|3DUT|D Chain D, The High Salt (Phosphate) Crystal Structure Of Deoxy
Hemoglobin E (Glu26lys) At Physiological Ph (Ph 7.35)
Length = 146
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 199 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 245
+ P+E++ + G V+ + G+ GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGKALGRLLVVYPWTQRFFESFGDLSTPD 52
>pdb|1A00|B Chain B, Hemoglobin (Val Beta1 Met, Trp Beta37 Tyr) Mutant
pdb|1A00|D Chain D, Hemoglobin (Val Beta1 Met, Trp Beta37 Tyr) Mutant
pdb|1YEQ|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Oxy (10 Test Sets)
pdb|1YEQ|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Oxy (10 Test Sets)
pdb|1Y46|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Deoxy Low-Salt (10 Test Sets)
pdb|1Y46|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betaw37y Deoxy Low-Salt (10 Test Sets)
Length = 146
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 199 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 245
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPYTQRFFESFGDLSTPD 52
>pdb|1Y2Z|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betav34g Deoxy Low-Salt (1 Test Set)
pdb|1Y2Z|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betav34g Deoxy Low-Salt (1 Test Set)
Length = 146
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 199 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 245
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVGYPWTQRFFESFGDLSTPD 52
>pdb|1QI8|B Chain B, Deoxygenated Structure Of A Distal Pocket Hemoglobin
Mutant
pdb|1QI8|D Chain D, Deoxygenated Structure Of A Distal Pocket Hemoglobin
Mutant
pdb|1J7W|B Chain B, Crystal Structure Of Deoxy Hbbetayq, A Site Directed
Mutant Of Hba
pdb|1J7W|D Chain D, Crystal Structure Of Deoxy Hbbetayq, A Site Directed
Mutant Of Hba
pdb|1J7Y|B Chain B, Crystal Structure Of Partially Ligated Mutant Of Hba
pdb|1J7Y|D Chain D, Crystal Structure Of Partially Ligated Mutant Of Hba
pdb|2W72|B Chain B, Deoxygenated Structure Of A Distal Site Hemoglobin Mutant
Plus Xe
pdb|2W72|D Chain D, Deoxygenated Structure Of A Distal Site Hemoglobin Mutant
Plus Xe
Length = 146
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 199 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 245
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEAYGRLLVVYPWTQRFFESFGDLSTPD 52
>pdb|1YE1|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Oxy (2mm Ihp, 20% Peg) (1 Test Set)
pdb|1YE1|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Oxy (2mm Ihp, 20% Peg) (1 Test Set)
pdb|1Y31|B Chain B, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Deoxy Low-Salt (1 Test Set)
pdb|1Y31|D Chain D, T-To-T(High) Quaternary Transitions In Human Hemoglobin:
Betay35a Deoxy Low-Salt (1 Test Set)
Length = 146
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 199 IYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPD 245
+ P+E++ + G V+ + G GRL V + R F+ FG ++TPD
Sbjct: 3 LTPEEKSAVTALWGKVNVDEVGGEALGRLLVVAPWTQRFFESFGDLSTPD 52
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,539,962
Number of Sequences: 62578
Number of extensions: 313446
Number of successful extensions: 787
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 717
Number of HSP's gapped (non-prelim): 44
length of query: 318
length of database: 14,973,337
effective HSP length: 99
effective length of query: 219
effective length of database: 8,778,115
effective search space: 1922407185
effective search space used: 1922407185
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)