Query 021016
Match_columns 318
No_of_seqs 280 out of 1397
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 06:56:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021016.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021016hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0697 Protein phosphatase 1B 100.0 6.3E-60 1.4E-64 412.7 17.4 247 24-304 3-277 (379)
2 PLN03145 Protein phosphatase 2 100.0 1.8E-48 4E-53 367.3 27.1 233 54-304 63-316 (365)
3 PF00481 PP2C: Protein phospha 100.0 2.6E-49 5.6E-54 358.6 19.3 229 57-303 1-247 (254)
4 KOG0699 Serine/threonine prote 100.0 8.5E-48 1.8E-52 347.1 14.1 145 142-303 330-482 (542)
5 KOG0698 Serine/threonine prote 100.0 3.5E-46 7.5E-51 349.5 25.4 230 58-304 42-290 (330)
6 PTZ00224 protein phosphatase 2 100.0 5.4E-45 1.2E-49 345.0 26.1 220 54-304 20-257 (381)
7 KOG0700 Protein phosphatase 2C 100.0 8.8E-42 1.9E-46 314.9 20.6 220 68-304 83-377 (390)
8 COG0631 PTC1 Serine/threonine 100.0 1.4E-39 2.9E-44 295.7 18.0 214 54-304 6-238 (262)
9 smart00332 PP2Cc Serine/threon 100.0 3.8E-34 8.1E-39 258.1 27.1 222 55-303 5-243 (255)
10 cd00143 PP2Cc Serine/threonine 100.0 5.5E-34 1.2E-38 256.2 26.3 221 57-303 2-240 (254)
11 PRK14559 putative protein seri 100.0 1E-33 2.2E-38 282.1 21.3 224 54-304 373-621 (645)
12 KOG1323 Serine/threonine phosp 100.0 4.6E-31 9.9E-36 236.7 15.2 209 86-311 140-467 (493)
13 KOG1379 Serine/threonine prote 99.8 2.3E-18 5E-23 155.0 18.6 195 68-310 89-300 (330)
14 PF13672 PP2C_2: Protein phosp 99.8 4.8E-19 1.1E-23 155.8 13.3 172 61-284 3-197 (212)
15 KOG0618 Serine/threonine phosp 99.8 2.9E-19 6.4E-24 179.2 12.6 219 55-304 521-758 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.7 1.3E-16 2.8E-21 138.3 18.3 170 67-302 14-192 (193)
17 TIGR02865 spore_II_E stage II 99.3 1E-10 2.2E-15 120.9 17.9 185 53-304 549-747 (764)
18 PF07228 SpoIIE: Stage II spor 99.0 7.5E-08 1.6E-12 83.0 17.6 157 90-303 4-175 (193)
19 COG2208 RsbU Serine phosphatas 96.5 0.16 3.5E-06 48.5 16.1 163 90-311 175-355 (367)
20 PF12095 DUF3571: Protein of u 78.4 2.3 5.1E-05 31.5 2.8 61 253-315 8-82 (83)
21 COG3076 Uncharacterized protei 46.8 20 0.00043 28.1 2.6 42 257-313 69-111 (135)
22 PF09436 DUF2016: Domain of un 39.0 20 0.00043 25.9 1.5 22 251-272 23-44 (72)
23 COG3700 AphA Acid phosphatase 37.6 39 0.00084 29.1 3.3 45 257-303 73-128 (237)
24 PF02260 FATC: FATC domain; I 31.3 71 0.0015 19.2 2.9 21 293-313 8-32 (33)
25 PRK15322 invasion protein OrgB 24.1 2.3E+02 0.005 24.8 5.7 53 251-306 144-197 (210)
26 PF05785 CNF1: Rho-activating 24.1 82 0.0018 28.9 3.2 26 138-164 128-153 (281)
No 1
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-60 Score=412.74 Aligned_cols=247 Identities=33% Similarity=0.526 Sum_probs=220.5
Q ss_pred HhhcccccccchhhHHHhhhHhhhhccccceeeeeeeeeecCCCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChH
Q 021016 24 LIAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRL 103 (318)
Q Consensus 24 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~ 103 (318)
.||+||+|+|.+..|.||+++|+ ++||||||..|||++.+....... -..|+||+|||||.|+.
T Consensus 3 aFLdKPkteKhn~~G~GNglryg-------------~SSMQGWR~eMEDah~A~~~l~~~---l~dWSfFAVfDGHAGs~ 66 (379)
T KOG0697|consen 3 AFLDKPKTEKHNAEGEGNGLRYG-------------VSSMQGWRVEMEDAHTAVAGLPSP---LEDWSFFAVFDGHAGSQ 66 (379)
T ss_pred ccccCcccccccccCcCCceeee-------------eccccchhhhhhhhhhhhhcCCCC---ccCceEEEEEcCccchH
Confidence 37999999999999999999776 899999999999999987654322 23699999999999999
Q ss_pred HHHHHHHHHHHHHHHccc------------------hhHHHhhHHHHHh--hhcCCCCCCCceEEEEEeCCeEEEEEeCC
Q 021016 104 AAEYAQKRLHANVISAGL------------------PRFRKTDESLLQE--SVSGGWQDGATAVCIWILGRTVFVANIGD 163 (318)
Q Consensus 104 as~~a~~~l~~~l~~~~~------------------~~f~~~d~~~~~~--~~~~~~~~GsTa~~~~i~~~~l~vanvGD 163 (318)
+|.+|+++|.+.++.... ..|+.+|+.+... ..+...++||||+++++.+.++|++|+||
T Consensus 67 va~~c~~hLlehi~sse~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGD 146 (379)
T KOG0697|consen 67 VANHCAEHLLEHIISSEEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGD 146 (379)
T ss_pred HHHHHHHHHHHHhhhhHHHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCc
Confidence 999999999998875411 0188888877643 34556779999999999999999999999
Q ss_pred ceeEEEeccccCCCCCCccccccceeEEeCcCCCCCChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCC-----
Q 021016 164 AKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF----- 238 (318)
Q Consensus 164 SRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~----- 238 (318)
||++++|++ .++.-|.||+|.+|.|++||+.+||.|+. .|++|.|+|||||||++||..
T Consensus 147 SRavl~rng---------------~~~f~TqDHKP~~p~EkeRIqnAGGSVMI-qRvNGsLAVSRAlGDydyK~v~~kgp 210 (379)
T KOG0697|consen 147 SRAVLCRNG---------------EVVFSTQDHKPYLPKEKERIQNAGGSVMI-QRVNGSLAVSRALGDYDYKNVPGKGP 210 (379)
T ss_pred chhheecCC---------------ceEEeccCCCCCChHHHHHHhcCCCeEEE-EEecceeeeehhccCcccccCCCCCc
Confidence 999999999 99999999999999999999999999996 699999999999999999964
Q ss_pred ---CeeeeceEEEEEeCCCCeEEEEEcCCccCccChHHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHH
Q 021016 239 ---GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMEL 304 (318)
Q Consensus 239 ---~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~~~a~~Lv~~A~~~ 304 (318)
-|+++|+|..+.....|+||||||||+||+|+++|++++|++++....++.. +|..+++.+|-.
T Consensus 211 ~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~--vcn~VvDtCLhK 277 (379)
T KOG0697|consen 211 TEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEE--VCNDVVDTCLHK 277 (379)
T ss_pred hhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHHHhhheecccHHH--HHHHHHHHHHhc
Confidence 2899999999999998899999999999999999999999999999999999 669999998764
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=1.8e-48 Score=367.33 Aligned_cols=233 Identities=35% Similarity=0.605 Sum_probs=197.5
Q ss_pred eeeeeeeeeecCCCCCCCceEEEecCCCCC----CCCCCcceEEEEEcCCCChHHHHHHHHHHHHHHHHcc---------
Q 021016 54 VEIEADAAEDKGSRHTMEDASVVLVDASSD----SPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG--------- 120 (318)
Q Consensus 54 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~----~~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~--------- 120 (318)
+.++++.+|++|.|++|||++++..++... .+......||||||||||+.+|++|++++++.|.+..
T Consensus 63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~a 142 (365)
T PLN03145 63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKV 142 (365)
T ss_pred CceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHH
Confidence 447889999999999999999876543111 1122346899999999999999999999998876531
Q ss_pred -chhHHHhhHHHHHhhhc-CCCCCCCceEEEEEeCCeEEEEEeCCceeEEEeccccCCCCCCccccccceeEEeCcCCCC
Q 021016 121 -LPRFRKTDESLLQESVS-GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKA 198 (318)
Q Consensus 121 -~~~f~~~d~~~~~~~~~-~~~~~GsTa~~~~i~~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~ 198 (318)
...|..++..+.+.... ....+|||++++++.++++|+|||||||+|+++++ ++++||+||+|
T Consensus 143 l~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g---------------~~~~LT~DH~~ 207 (365)
T PLN03145 143 VSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG---------------KAIEMSRDHKP 207 (365)
T ss_pred HHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCC---------------eEEEecCCCCC
Confidence 11277777777654332 33458999999999999999999999999999998 99999999999
Q ss_pred CChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCC------CeeeeceEEEEEeCCCCeEEEEEcCCccCccChH
Q 021016 199 IYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF------GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPS 272 (318)
Q Consensus 199 ~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~------~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ 272 (318)
.++.|+.||.++||.+. .++++|.+++||||||+.+|.. .++++|++..+++.++|+|||||||||||+|+++
T Consensus 208 ~~~~E~~RI~~~Gg~v~-~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~e 286 (365)
T PLN03145 208 MCSKERKRIEASGGYVY-DGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQ 286 (365)
T ss_pred CCHHHHHHHHHcCCcee-cceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHH
Confidence 99999999999999996 5789999999999999888743 3789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCcchhhHHHHHHHHHHHH
Q 021016 273 DAVEFVQKLLKVTAHFAFTCQSEKLVDFFMEL 304 (318)
Q Consensus 273 ei~~~v~~~~~~~~~~~~~~~a~~Lv~~A~~~ 304 (318)
++++++++.+....+++. +|+.|+++|++.
T Consensus 287 e~v~~i~~~l~~~~~p~~--aa~~Lv~~Al~r 316 (365)
T PLN03145 287 NAVDFARRRLQEHNDPVM--CSKELVDEALKR 316 (365)
T ss_pred HHHHHHHHHHhcCCCHHH--HHHHHHHHHHhC
Confidence 999999888876667777 789999999875
No 3
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=2.6e-49 Score=358.64 Aligned_cols=229 Identities=39% Similarity=0.602 Sum_probs=188.7
Q ss_pred eeeeeeecCCCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChHHHHHHHHHHHHHHHHcc------------chhH
Q 021016 57 EADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG------------LPRF 124 (318)
Q Consensus 57 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~------------~~~f 124 (318)
++|+.+++|+|.+|||++++..++... ....+..+|||||||||+.++++++++++..+.+.. ...|
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~-~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~ 79 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSN-SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAF 79 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCC-TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCcccc-CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhccccee
Confidence 367899999999999999998754322 334568999999999999999999999997665431 1116
Q ss_pred HH-hhHHHHHhhhc-CCCCCCCceEEEEEeCCeEEEEEeCCceeEEEeccccCCCCCCccccccceeE-EeCcCCCCCCh
Q 021016 125 RK-TDESLLQESVS-GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAI-VVTRVHKAIYP 201 (318)
Q Consensus 125 ~~-~d~~~~~~~~~-~~~~~GsTa~~~~i~~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~-~lT~DH~~~~~ 201 (318)
.. ++..+...... ....+|||+++++|.++++|+|||||||||+++++ ... +||+||+|.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~---------------~~~~~Lt~dH~~~~~ 144 (254)
T PF00481_consen 80 LAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNG---------------GIIKQLTRDHKPSNP 144 (254)
T ss_dssp HHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETT---------------EEEEESS---STTSH
T ss_pred eecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeecc---------------ccccccccccccchh
Confidence 66 66666552222 56789999999999999999999999999999998 666 99999999999
Q ss_pred HHHHHHHHcCCEEeeCCeecCeeeccccccCccCCC---CCeeeeceEEEEEeCCCCeEEEEEcCCccCccChHHHHHHH
Q 021016 202 QERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKK---FGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFV 278 (318)
Q Consensus 202 ~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~---~~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei~~~v 278 (318)
.|+.||+++||.+...+|+.|.+++||+|||+.+|+ ++|+++|+|..+++.++|+|||||||||||+|+++|+++++
T Consensus 145 ~E~~RI~~~gg~v~~~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v 224 (254)
T PF00481_consen 145 DERERIRKAGGRVSENGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIV 224 (254)
T ss_dssp HHHHHHHHTT-GEEETEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHH
T ss_pred hccceeeccccccccchhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHH
Confidence 999999999999998889999999999999999998 78999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCcchhhHHHHHHHHHHH
Q 021016 279 QKLLKVTAHFAFTCQSEKLVDFFME 303 (318)
Q Consensus 279 ~~~~~~~~~~~~~~~a~~Lv~~A~~ 303 (318)
++....+..++. +|+.|+++|++
T Consensus 225 ~~~~~~~~~~~~--~a~~L~~~A~~ 247 (254)
T PF00481_consen 225 RESLNSGRSPQE--AAEKLVDEAIA 247 (254)
T ss_dssp HHHHHHHSHHHH--HHHHHHHHHHH
T ss_pred HHHHhcCCcHHH--HHHHHHHHHHh
Confidence 998887666777 88999999986
No 4
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-48 Score=347.13 Aligned_cols=145 Identities=37% Similarity=0.647 Sum_probs=138.4
Q ss_pred CCCceEEEEEeCCeEEEEEeCCceeEEEeccccCCCCCCccccccceeEEeCcCCCCCChHHHHHHHHcCCEEeeCCeec
Q 021016 142 DGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQ 221 (318)
Q Consensus 142 ~GsTa~~~~i~~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~~~~~E~~ri~~~gg~v~~~~r~~ 221 (318)
+|||++++++.+++|||||.|||||+++|+| +++.++.||+|..+.|..||.++||.|.-++|++
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~G---------------kAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVN 394 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNG---------------KAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVN 394 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCC---------------ceeecccCCCcccHHHHHHHHhcCCeEeecceec
Confidence 5999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CeeeccccccCccCCCC--------CeeeeceEEEEEeCCCCeEEEEEcCCccCccChHHHHHHHHHHHHhcCCcchhhH
Q 021016 222 GRLEVSRAFGDRQFKKF--------GVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQ 293 (318)
Q Consensus 222 g~l~vtRalGd~~~k~~--------~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~~~ 293 (318)
|.|+++|||||..||.. .|++.|||....|++.|+|+||||||||++|+.+|+++||+..+..+..+.. +
T Consensus 395 GGLNLSRA~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~--i 472 (542)
T KOG0699|consen 395 GGLNLSRAFGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSE--I 472 (542)
T ss_pred CccchhhhhhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHH--H
Confidence 99999999999999953 3789999999999999999999999999999999999999999999988888 5
Q ss_pred HHHHHHHHHH
Q 021016 294 SEKLVDFFME 303 (318)
Q Consensus 294 a~~Lv~~A~~ 303 (318)
++.|++.+|.
T Consensus 473 ceeL~D~CLA 482 (542)
T KOG0699|consen 473 CEELCDACLA 482 (542)
T ss_pred HHHHHHhhcC
Confidence 5999998875
No 5
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-46 Score=349.53 Aligned_cols=230 Identities=36% Similarity=0.555 Sum_probs=194.7
Q ss_pred eeeeeecCCCCCCCceEEEecCCCCCCCCCC-cceEEEEEcCCCChHHHHHHHHHHHHHHHHccc-------------hh
Q 021016 58 ADAAEDKGSRHTMEDASVVLVDASSDSPPNL-RCAHFAIFDGHGGRLAAEYAQKRLHANVISAGL-------------PR 123 (318)
Q Consensus 58 ~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~-~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~-------------~~ 123 (318)
.+.++.+|+|+.|||++....+......... .++||||||||||+.+|+|+.++|+..+.++.. ..
T Consensus 42 ~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~ 121 (330)
T KOG0698|consen 42 GSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRA 121 (330)
T ss_pred eEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence 4556899999999999999876543222233 589999999999999999999999998876421 22
Q ss_pred HH-HhhHHHHHhhhcCCCCCCCceEEEEEeCC-eEEEEEeCCceeEEEeccccCCCCCCccccccceeEEeCcCCCCCCh
Q 021016 124 FR-KTDESLLQESVSGGWQDGATAVCIWILGR-TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYP 201 (318)
Q Consensus 124 f~-~~d~~~~~~~~~~~~~~GsTa~~~~i~~~-~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~~~~ 201 (318)
|. ++|..+.+. ......+|||++++++.++ +|||||+|||||||++++ | .+++||.||+|..+
T Consensus 122 F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~---~-----------~a~~Ls~DHkP~~~ 186 (330)
T KOG0698|consen 122 FLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKG---G-----------VAVQLSVDHKPDRE 186 (330)
T ss_pred HHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCC---C-----------eeeeCCCCCCCCcH
Confidence 88 588888765 2234678999998888855 999999999999999865 1 79999999999999
Q ss_pred HHHHHHHHcCCEEeeC---CeecCeeeccccccCccCCCCCeeeeceEEEEEeCCCCeEEEEEcCCccCccChHHHHHHH
Q 021016 202 QERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFV 278 (318)
Q Consensus 202 ~E~~ri~~~gg~v~~~---~r~~g~l~vtRalGd~~~k~~~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei~~~v 278 (318)
.|+.||.++||++... .|++|.|++||+|||+.+|..+|+++|++....+.+.|+|||||||||||+|+++|++++|
T Consensus 187 ~E~~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V 266 (330)
T KOG0698|consen 187 DERERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLV 266 (330)
T ss_pred HHHHHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHH
Confidence 9999999999999965 3999999999999999999778999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCcchhhHHHHHHHHHHHH
Q 021016 279 QKLLKVTAHFAFTCQSEKLVDFFMEL 304 (318)
Q Consensus 279 ~~~~~~~~~~~~~~~a~~Lv~~A~~~ 304 (318)
+..+.....+.. +++.|.+.|+..
T Consensus 267 ~~~~~~~~~~~~--a~~~l~~~a~~~ 290 (330)
T KOG0698|consen 267 RDELASISSPLA--AAKLLATEALSR 290 (330)
T ss_pred HHHhhccccHHH--HHHHHHHHHhhc
Confidence 987643444555 778888888775
No 6
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=5.4e-45 Score=344.96 Aligned_cols=220 Identities=32% Similarity=0.516 Sum_probs=186.0
Q ss_pred eeeeeeeeeecCCCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChHHHHHHHHHHHHHHHHccc--------hhHH
Q 021016 54 VEIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGL--------PRFR 125 (318)
Q Consensus 54 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~--------~~f~ 125 (318)
..+.+|..+++|+|++|||++++..+ ..+.+|||||||||..+|++++++|++.+.+... ..|.
T Consensus 20 ~~~~~g~~s~~G~R~~nED~~~v~~~--------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~~~~~~l~~a~~ 91 (381)
T PTZ00224 20 SIFRCASACVNGYRESMEDAHLLYLT--------DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEPMTDERMEELCL 91 (381)
T ss_pred ccEEEEEEeCCCCCCCCCCeeEeccC--------CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccccccHHHHHHHHH
Confidence 34678999999999999999887532 1347999999999999999999999987754321 1255
Q ss_pred HhhHHHHHhhhcCCCCCCCceEEEEEe-CCeEEEEEeCCceeEEEeccccCCCCCCccccccceeEEeCcCCCCCChHHH
Q 021016 126 KTDESLLQESVSGGWQDGATAVCIWIL-GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQER 204 (318)
Q Consensus 126 ~~d~~~~~~~~~~~~~~GsTa~~~~i~-~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~~~~~E~ 204 (318)
.+|..+.+. ...+|||++++++. +.++|+|||||||+|++|++ ++++||+||++.++.|+
T Consensus 92 ~~d~~i~~~----~~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g---------------~~~~LT~DH~~~~~~E~ 152 (381)
T PTZ00224 92 EIDEEWMDS----GREGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDG---------------KLVFATEDHKPNNPGER 152 (381)
T ss_pred HHHHHHHhc----ccCCCCeEEEEEEEECCEEEEEEcccceEEEEECC---------------EEEEcccCCCCCCHHHH
Confidence 666666533 23569999998886 57999999999999999998 99999999999999999
Q ss_pred HHHHHcCCEEeeCCeecCeeeccccccCccCCCC--------CeeeeceEEEEEeCCCCeEEEEEcCCccC-ccChHHHH
Q 021016 205 ARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF--------GVVATPDIHSFEVTERDHFIILGCDGLWG-VFGPSDAV 275 (318)
Q Consensus 205 ~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~--------~v~~~Pdv~~~~l~~~d~~liLaSDGlwd-~ls~~ei~ 275 (318)
.||.++||.+.. +|++|.+++||+|||..+|.. .|+++||+..+++.++| ||||||||||| +++++|++
T Consensus 153 ~RI~~~gg~v~~-~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~~ls~eEi~ 230 (381)
T PTZ00224 153 QRIEACGGRVVS-NRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEGNFSNEEVV 230 (381)
T ss_pred hHHHHccCEecc-ccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCC-EEEEECCCcCcCccCHHHHH
Confidence 999999999974 699999999999999887643 36789999999998887 99999999999 89999999
Q ss_pred HHHHHHHHhcCCcchhhHHHHHHHHHHHH
Q 021016 276 EFVQKLLKVTAHFAFTCQSEKLVDFFMEL 304 (318)
Q Consensus 276 ~~v~~~~~~~~~~~~~~~a~~Lv~~A~~~ 304 (318)
+++.+.+....+++. +|+.|++.|++.
T Consensus 231 ~iv~~~l~~~~~~~~--aA~~Lv~~A~~r 257 (381)
T PTZ00224 231 AFVKEQLETCDDLAV--VAGRVCDEAIRR 257 (381)
T ss_pred HHHHHHHhcCCCHHH--HHHHHHHHHHhc
Confidence 999877665566777 889999999875
No 7
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-42 Score=314.85 Aligned_cols=220 Identities=29% Similarity=0.379 Sum_probs=178.1
Q ss_pred CCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChHHHHHHHHHHHHHHHHccc--------------------------
Q 021016 68 HTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGL-------------------------- 121 (318)
Q Consensus 68 ~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~-------------------------- 121 (318)
..-||++.+..-. ..+|.|+||||||||..|++|++++|..++...+.
T Consensus 83 ~~~edrv~~~~s~------~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~ 156 (390)
T KOG0700|consen 83 KAEEDRVSVAVSE------ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYW 156 (390)
T ss_pred CcccCcceeeeec------cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhh
Confidence 4446666554321 33678999999999999999999999988772111
Q ss_pred ------------------hhHHHhhHHHHHhhhc------CCCCCCCceEEEEEeCCeEEEEEeCCceeEEEeccccCCC
Q 021016 122 ------------------PRFRKTDESLLQESVS------GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGS 177 (318)
Q Consensus 122 ------------------~~f~~~d~~~~~~~~~------~~~~~GsTa~~~~i~~~~l~vanvGDSRa~l~r~~~~~g~ 177 (318)
..|.++++.++..... .-..+||||++.++.+..|||||+|||||+|.+..
T Consensus 157 ~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~----- 231 (390)
T KOG0700|consen 157 KQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVE----- 231 (390)
T ss_pred hcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceec-----
Confidence 1178888887654322 11347999999999999999999999999998766
Q ss_pred CCCccccccceeEEeCcCCCCCChHHHHHHHHcCC---EEeeC--CeecCeeeccccccCccCCC---------------
Q 021016 178 NNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGG---TVSSN--GRLQGRLEVSRAFGDRQFKK--------------- 237 (318)
Q Consensus 178 ~~~~~~~~~~~~~~lT~DH~~~~~~E~~ri~~~gg---~v~~~--~r~~g~l~vtRalGd~~~k~--------------- 237 (318)
...+.+.++|||.||+..++.|++||+..+. .+..+ +|+.|.|.+||||||.++|.
T Consensus 232 ----~~~~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~ 307 (390)
T KOG0700|consen 232 ----NNGSWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIP 307 (390)
T ss_pred ----CCCCeEEEEecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCC
Confidence 1223368999999999999999999999985 22233 49999999999999999883
Q ss_pred -----CCeeeeceEEEEEeCCCCeEEEEEcCCccCccChHHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHH
Q 021016 238 -----FGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMEL 304 (318)
Q Consensus 238 -----~~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~~~a~~Lv~~A~~~ 304 (318)
++++++|+|+.++|.+.|+||||||||||++|||+|++.+|..++...-+-+. +|+.||++|+.-
T Consensus 308 ~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~--~A~hLIr~aL~~ 377 (390)
T KOG0700|consen 308 YIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGN--PATHLIRHALGR 377 (390)
T ss_pred CCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCC--HHHHHHHHHHhh
Confidence 56999999999999999999999999999999999999999998775333344 899999999874
No 8
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=295.75 Aligned_cols=214 Identities=28% Similarity=0.395 Sum_probs=173.6
Q ss_pred eeeeeeeeeecC-CCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChHHHHHHHHHHHHHHHHccch----------
Q 021016 54 VEIEADAAEDKG-SRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP---------- 122 (318)
Q Consensus 54 ~~~~~~~~s~~G-~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~---------- 122 (318)
+.+.++..++.| +|.+|||++.+..+. .+.. ..||+||||||||.++++|++.+++.|.+....
T Consensus 6 ~~~~~~~~s~~g~~R~~NeD~~~~~~~~----~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~ 80 (262)
T COG0631 6 LSLKVAGLSDVGTVRKHNEDAFLIKPNE----NGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESL 80 (262)
T ss_pred ceeeeeeeccCCCccCCCCcceeecccc----CCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhH
Confidence 456677778888 599999999997632 1222 579999999999999999999998877664211
Q ss_pred ------hHHHhhHHHHHhhh--cCCCCCCCceEEEEEeCCeEEEEEeCCceeEEEeccccCCCCCCccccccceeEEeCc
Q 021016 123 ------RFRKTDESLLQESV--SGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTR 194 (318)
Q Consensus 123 ------~f~~~d~~~~~~~~--~~~~~~GsTa~~~~i~~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~ 194 (318)
.+..++..+..... .....+|||++++++.++++|+|||||||+|++|++ .+++||+
T Consensus 81 ~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~---------------~~~~lT~ 145 (262)
T COG0631 81 EELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDG---------------ELKQLTE 145 (262)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCC---------------ceEEecc
Confidence 15556666655543 344678999999999999999999999999999999 9999999
Q ss_pred CCCCCChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCCCeeeeceEEEEEeCCCCeEEEEEcCCccCccChHHH
Q 021016 195 VHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDA 274 (318)
Q Consensus 195 DH~~~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei 274 (318)
||++.+..++.|+...++.... .|. .++|||||+..+ .+|++...++.++| |+|||||||||.++++++
T Consensus 146 DH~~~~~~~~~~~~~~~~~~~~-~~~---~~ltralG~~~~------~~p~~~~~~~~~~d-~llL~SDGl~d~v~~~~i 214 (262)
T COG0631 146 DHSLVNRLEQRGIITPEEARSH-PRR---NALTRALGDFDL------LEPDITELELEPGD-FLLLCSDGLWDVVSDDEI 214 (262)
T ss_pred CCcHHHHHHHhcCCCHHHHHhC-ccc---hhhhhhcCCCcc------cceeEEEEEcCCCC-EEEEECCCCccCcCHHHH
Confidence 9999999998887666554432 233 289999998765 58999999999885 999999999999999999
Q ss_pred HHHHHHHHHhcCCcchhhHHHHHHHHHHHH
Q 021016 275 VEFVQKLLKVTAHFAFTCQSEKLVDFFMEL 304 (318)
Q Consensus 275 ~~~v~~~~~~~~~~~~~~~a~~Lv~~A~~~ 304 (318)
+++++. ...++. ++++|++.|++.
T Consensus 215 ~~il~~----~~~~~~--~~~~li~~a~~~ 238 (262)
T COG0631 215 VDILKN----SETPQE--AADKLIELALEG 238 (262)
T ss_pred HHHHhc----CCCHHH--HHHHHHHHHHhc
Confidence 999965 455677 889999999984
No 9
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=3.8e-34 Score=258.06 Aligned_cols=222 Identities=38% Similarity=0.578 Sum_probs=182.0
Q ss_pred eeeeeeeeecCCCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChHHHHHHHHHHHHHHHHccc-------------
Q 021016 55 EIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGL------------- 121 (318)
Q Consensus 55 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~------------- 121 (318)
.+.++..+.+|+|..|||++++..+. ..+..+|+|||||||+.+|+++++.+.+.+.+...
T Consensus 5 ~~~~~~~~~~~~r~~neD~~~~~~~~------~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 78 (255)
T smart00332 5 GLRYGLSSMQGVRKPMEDAHVITPDL------SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEAL 78 (255)
T ss_pred ceeEEEecCCCCCCCCcceEEEeccC------CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHH
Confidence 35566778888999999999986532 13568999999999999999999999987765421
Q ss_pred -hhHHHhhHHHHHhhhcC--CCCCCCceEEEEEeCCeEEEEEeCCceeEEEeccccCCCCCCccccccceeEEeCcCCCC
Q 021016 122 -PRFRKTDESLLQESVSG--GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKA 198 (318)
Q Consensus 122 -~~f~~~d~~~~~~~~~~--~~~~GsTa~~~~i~~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~ 198 (318)
..|..++..+....... ...+|||++++++.++++|++|+||||+|++|++ ++.++|.||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~---------------~~~~lt~dh~~ 143 (255)
T smart00332 79 RKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNG---------------KAVQLTEDHKP 143 (255)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCC---------------ceeEcCCCCCC
Confidence 11444555554433222 2468999999999999999999999999999998 88999999999
Q ss_pred CChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCCCeeeeceEEEEEe-CCCCeEEEEEcCCccCccChHHHHHH
Q 021016 199 IYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEV-TERDHFIILGCDGLWGVFGPSDAVEF 277 (318)
Q Consensus 199 ~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~v~~~Pdv~~~~l-~~~d~~liLaSDGlwd~ls~~ei~~~ 277 (318)
.++.|..||...++.+.. ++.++...+||++|+..+|+ .+.++|++...++ .++| +||||||||||+++++++.++
T Consensus 144 ~~~~~~~~i~~~~~~~~~-~~~~~~~~lt~~~g~~~~~~-~i~~~p~~~~~~~~~~~d-~ill~SDGv~~~l~~~~i~~~ 220 (255)
T smart00332 144 SNEDERARIEAAGGFVIN-GRVNGVLALSRAIGDFFLKP-YVSAEPDVTVVELTEKDD-FLILASDGLWDVLSNQEVVDI 220 (255)
T ss_pred cCHHHHHHHHHcCCEEEC-CeECCeEecccccCCHhhcC-CeEeeeEEEEEEecCCCc-EEEEECCccccCCCHHHHHHH
Confidence 999999999999998864 47788899999999988886 4899999999997 6666 999999999999999999999
Q ss_pred HHHHHHhcCCcchhhHHHHHHHHHHH
Q 021016 278 VQKLLKVTAHFAFTCQSEKLVDFFME 303 (318)
Q Consensus 278 v~~~~~~~~~~~~~~~a~~Lv~~A~~ 303 (318)
+...... .++.. +|+.|++.|.+
T Consensus 221 ~~~~~~~-~~~~~--~~~~l~~~a~~ 243 (255)
T smart00332 221 VRKHLSK-SDPEE--AAKRLIDLALA 243 (255)
T ss_pred HHHHhhc-CCHHH--HHHHHHHHHHH
Confidence 9875432 23556 78999998876
No 10
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=5.5e-34 Score=256.24 Aligned_cols=221 Identities=38% Similarity=0.644 Sum_probs=180.0
Q ss_pred eeeeeeecCCCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChHHHHHHHHHHHHHHHHccch--------------
Q 021016 57 EADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP-------------- 122 (318)
Q Consensus 57 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~-------------- 122 (318)
.++..+..|+|+.|||++.+...... ..+.+|+|||||||+..++++++.+.+.+.+....
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~-----~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~ 76 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNN-----EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALR 76 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCC-----CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Confidence 35677888899999999998643210 24589999999999999999999998877654321
Q ss_pred -hHHHhhHHHHHhhhc--CCCCCCCceEEEEEeCCeEEEEEeCCceeEEEeccccCCCCCCccccccceeEEeCcCCCCC
Q 021016 123 -RFRKTDESLLQESVS--GGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAI 199 (318)
Q Consensus 123 -~f~~~d~~~~~~~~~--~~~~~GsTa~~~~i~~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~~ 199 (318)
.|..++..+...... ....+|||++++++.+++++++|+||||+|+++++ +++++|.||++.
T Consensus 77 ~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~---------------~~~~lt~dh~~~ 141 (254)
T cd00143 77 KAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG---------------EAVQLTKDHKPV 141 (254)
T ss_pred HHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCC---------------ceeEcCCCCCCc
Confidence 155555555544322 34568999999999999999999999999999999 999999999999
Q ss_pred ChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCCCeeeeceEEEEEe-CCCCeEEEEEcCCccCccChHHHHHHH
Q 021016 200 YPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEV-TERDHFIILGCDGLWGVFGPSDAVEFV 278 (318)
Q Consensus 200 ~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~v~~~Pdv~~~~l-~~~d~~liLaSDGlwd~ls~~ei~~~v 278 (318)
++.++.||...++.+. ..+.++...+||+||+..+|+ ++.++|++..+++ .++| +||||||||||+++++++.+++
T Consensus 142 ~~~~~~~i~~~~~~~~-~~~~~~~~~~t~~lG~~~~~~-~~~~~~~~~~~~l~~~~d-~ill~SDG~~~~l~~~~i~~~~ 218 (254)
T cd00143 142 NEEERERIEKAGGRVS-NGRVPGVLAVTRALGDFDLKP-GVSAEPDVTVVKLTEDDD-FLILASDGLWDVLSNQEAVDIV 218 (254)
T ss_pred ChHHHHHHHHcCCcEE-eCEEcCceeeccccCCccccC-CEEcCCeEEEEEeCCCCc-EEEEECCCCeeccChHHHHHHH
Confidence 8999999999999765 456667789999999998884 4788999999999 6666 8999999999999999999999
Q ss_pred HHHHHhcCCcchhhHHHHHHHHHHH
Q 021016 279 QKLLKVTAHFAFTCQSEKLVDFFME 303 (318)
Q Consensus 279 ~~~~~~~~~~~~~~~a~~Lv~~A~~ 303 (318)
...... .+++. +|++|++.|.+
T Consensus 219 ~~~~~~-~~~~~--~a~~l~~~a~~ 240 (254)
T cd00143 219 RSELAK-EDLQE--AAQELVDLALR 240 (254)
T ss_pred HHHhcc-cCHHH--HHHHHHHHHHh
Confidence 764321 24566 78999999876
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=1e-33 Score=282.11 Aligned_cols=224 Identities=21% Similarity=0.232 Sum_probs=154.4
Q ss_pred eeeeeeeeeecCC-CCCCCceEEEecCCCC-CCCCC---CcceEEEEEcCCCChHHHHHHHHHHHHHHHHcc--------
Q 021016 54 VEIEADAAEDKGS-RHTMEDASVVLVDASS-DSPPN---LRCAHFAIFDGHGGRLAAEYAQKRLHANVISAG-------- 120 (318)
Q Consensus 54 ~~~~~~~~s~~G~-R~~nED~~~~~~~~~~-~~~~~---~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~-------- 120 (318)
+.++++..|++|. |.+|||++.+..+... ..+.. ....+|+|||||||+.++++|++...+.|.+..
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~ 452 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDEL 452 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccc
Confidence 4588899999996 9999999877543110 01111 134689999999999877777666555443211
Q ss_pred ------chhHHHhhHHHHHhhhc----CCCCCCCceEEEEEeCCeEEEEEeCCceeEEEe-ccccCCCCCCcccccccee
Q 021016 121 ------LPRFRKTDESLLQESVS----GGWQDGATAVCIWILGRTVFVANIGDAKAVVAR-SSIVDGSNNHLDELSSLKA 189 (318)
Q Consensus 121 ------~~~f~~~d~~~~~~~~~----~~~~~GsTa~~~~i~~~~l~vanvGDSRa~l~r-~~~~~g~~~~~~~~~~~~~ 189 (318)
...|..++..+.+.... ....+|||++++++.++++|++||||||+|+++ ++ ++
T Consensus 453 ~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g---------------~l 517 (645)
T PRK14559 453 PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKG---------------GL 517 (645)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCC---------------eE
Confidence 11155667777553222 334689999999999999999999999999884 56 89
Q ss_pred EEeCcCCCCCChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCCCeeeeceEEEEEeCCCCeEEEEEcCCccCc-
Q 021016 190 IVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGV- 268 (318)
Q Consensus 190 ~~lT~DH~~~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~- 268 (318)
++||+||++... +.+.|-.-.......+...+|||||+...+. .+|++..+.+.++| +||||||||||.
T Consensus 518 ~QLT~DHs~~~~-----lv~~Gi~~~~a~~~p~~~~LTrALG~~~~~~----l~Pdi~~~~L~~gD-~lLLCSDGL~D~~ 587 (645)
T PRK14559 518 EQLTVDHEVGQR-----EIQRGVEPQIAYARPDAYQLTQALGPRDNSA----IQPDIQFLEIEEDT-LLLLCSDGLSDND 587 (645)
T ss_pred EEeCCCCCHHHH-----HHHhCCCHHHHhcCcccceeeeccCCCCCCc----ccceEEEEEcCCCC-EEEEECCCCCCCc
Confidence 999999997532 2233310000111234578999999865543 38999999998876 899999999994
Q ss_pred cChHHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHH
Q 021016 269 FGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMEL 304 (318)
Q Consensus 269 ls~~ei~~~v~~~~~~~~~~~~~~~a~~Lv~~A~~~ 304 (318)
+-+....+.+...+....+++. ++++|++.|++.
T Consensus 588 ~ve~~~~~~l~~il~~~~~l~~--aa~~Li~~Al~~ 621 (645)
T PRK14559 588 LLETHWQTHLLPLLSSSANLDQ--GLNKLIDLANQY 621 (645)
T ss_pred ccchHHHHHHHHHHhcCCCHHH--HHHHHHHHHHHc
Confidence 2233333344444455556777 789999999875
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-31 Score=236.69 Aligned_cols=209 Identities=27% Similarity=0.437 Sum_probs=170.0
Q ss_pred CCCcceEEEEEcCCCChHHHHHHHHHHHHHHHHccch-------------------------------------------
Q 021016 86 PNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP------------------------------------------- 122 (318)
Q Consensus 86 ~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~------------------------------------------- 122 (318)
....+++|.+||||.|..+|-.|++.+++++..++..
T Consensus 140 ~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~L 219 (493)
T KOG1323|consen 140 PRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHL 219 (493)
T ss_pred CCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHh
Confidence 3456899999999999999999999988776543210
Q ss_pred -------hHHHhhHHHHHhhhcCCCCCCCceEEEEEeCCeEEEEEeCCceeEEEeccccCCCCCCccccccceeEEeCcC
Q 021016 123 -------RFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRV 195 (318)
Q Consensus 123 -------~f~~~d~~~~~~~~~~~~~~GsTa~~~~i~~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~D 195 (318)
.|+.+|++|..+...-...+|||+++++..-+++|+||.|||||++.|++ ++++|+++
T Consensus 220 ViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnd---------------eirplS~e 284 (493)
T KOG1323|consen 220 VIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRND---------------EIRPLSKE 284 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecC---------------Ceeecccc
Confidence 08899999887776666778999999999999999999999999999999 99999999
Q ss_pred CCCCChHHHHHHHHcCC--------EEe----------------------------------------------eCCeec
Q 021016 196 HKAIYPQERARIQKSGG--------TVS----------------------------------------------SNGRLQ 221 (318)
Q Consensus 196 H~~~~~~E~~ri~~~gg--------~v~----------------------------------------------~~~r~~ 221 (318)
.+|. .||+|++..+- ... ...|+.
T Consensus 285 fTPe--tERqRlQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll 362 (493)
T KOG1323|consen 285 FTPE--TERQRLQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLL 362 (493)
T ss_pred cCcH--HHHHHHHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhh
Confidence 9984 59999988641 100 023566
Q ss_pred CeeeccccccCccCCC--------CCeeeeceEEEEEeCC----CCeEEEEEcCCccCccChHHHHHHHHHHHHhcCC--
Q 021016 222 GRLEVSRAFGDRQFKK--------FGVVATPDIHSFEVTE----RDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAH-- 287 (318)
Q Consensus 222 g~l~vtRalGd~~~k~--------~~v~~~Pdv~~~~l~~----~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~-- 287 (318)
+.+.|||.|||..+|- +-+++.|+|+..++.+ .|+.+|||||||||++||+|++.+|++++....+
T Consensus 363 ~TigVsRGlGDH~Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~D 442 (493)
T KOG1323|consen 363 ATIGVSRGLGDHHLKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPAD 442 (493)
T ss_pred hhheeccccCcceeeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCC
Confidence 7799999999998772 2378899999998864 4559999999999999999999999999875432
Q ss_pred c-chhhHHHHHHHHHHHHHHhhCCc
Q 021016 288 F-AFTCQSEKLVDFFMELIILSGWF 311 (318)
Q Consensus 288 ~-~~~~~a~~Lv~~A~~~i~~~~~~ 311 (318)
+ ..+.+|+.||-.|...-..+||-
T Consensus 443 p~RYt~aaqdlva~arg~~k~rgWr 467 (493)
T KOG1323|consen 443 PSRYTQAAQDLVAAARGQQKDRGWR 467 (493)
T ss_pred hhHHHHHHHHHHHHhcCccCCCcee
Confidence 2 33346899999998888888884
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.81 E-value=2.3e-18 Score=154.98 Aligned_cols=195 Identities=19% Similarity=0.264 Sum_probs=128.0
Q ss_pred CCCCceEEEecCCCCCCCCCCcceEEEEEcCCCCh-----HHHHHHHHHHHHH--HHHccc--h-h-HHHhhHHHHHhhh
Q 021016 68 HTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGR-----LAAEYAQKRLHAN--VISAGL--P-R-FRKTDESLLQESV 136 (318)
Q Consensus 68 ~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~-----~as~~a~~~l~~~--l~~~~~--~-~-f~~~d~~~~~~~~ 136 (318)
+.-||+|++..+. ...+.|||||+||| ..+.|.++.+-.. +.+... + . ..-++..+.+...
T Consensus 89 ~~GEDa~Fvss~~--------~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~ 160 (330)
T KOG1379|consen 89 KGGEDAWFVSSNP--------HAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAELKS 160 (330)
T ss_pred CCCCcceeeccCc--------ccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHhh
Confidence 4568999997542 34789999999966 4566655544322 222111 0 0 1112222222211
Q ss_pred -cCCCCCCCceEEEEEe--CCeEEEEEeCCceeEEEeccccCCCCCCccccccceeEEeCcCCC--CCChHHHHHHHHcC
Q 021016 137 -SGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHK--AIYPQERARIQKSG 211 (318)
Q Consensus 137 -~~~~~~GsTa~~~~i~--~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~--~~~~~E~~ri~~~g 211 (318)
+...-++|||+++.++ +++||+||+|||...++|+| ++++-|..+. .+.|....
T Consensus 161 ~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G---------------~vv~~S~~Q~H~FN~PyQLs------ 219 (330)
T KOG1379|consen 161 QKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREG---------------KVVFRSPEQQHYFNTPYQLS------ 219 (330)
T ss_pred cCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECC---------------EEEEcCchheeccCCceeec------
Confidence 1223468899999998 78999999999999999999 8888877543 22110000
Q ss_pred CEEeeCCeecCeeeccccccCccCCCCCeeeeceEEEEEeCCCCeEEEEEcCCccCccChHHHHHHHHHHHH-hcCCcch
Q 021016 212 GTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLK-VTAHFAF 290 (318)
Q Consensus 212 g~v~~~~r~~g~l~vtRalGd~~~k~~~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~-~~~~~~~ 290 (318)
+.+. + ..-.++| .-...+++.+++.++| .||||||||||+|.+++|..++..... ....++.
T Consensus 220 --~~p~----~---~~~~~~d-------~p~~ad~~~~~v~~GD-vIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~ 282 (330)
T KOG1379|consen 220 --SPPE----G---YSSYISD-------VPDSADVTSFDVQKGD-VIILATDGLFDNLPEKEILSILKGLDARGNLDLQV 282 (330)
T ss_pred --cCCc----c---ccccccC-------CccccceEEEeccCCC-EEEEecccccccccHHHHHHHHHHhhccccccHHH
Confidence 0000 0 0111222 1123567899999999 999999999999999999999988776 5667788
Q ss_pred hhHHHHHHHHHHHHHHhhCC
Q 021016 291 TCQSEKLVDFFMELIILSGW 310 (318)
Q Consensus 291 ~~~a~~Lv~~A~~~i~~~~~ 310 (318)
.|+++++.|.++.....|
T Consensus 283 --~A~~ia~~Ar~ls~d~~~ 300 (330)
T KOG1379|consen 283 --TAQKIAEKARELSRDPKF 300 (330)
T ss_pred --HHHHHHHHHHHhccCcCc
Confidence 889999999998555444
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.80 E-value=4.8e-19 Score=155.75 Aligned_cols=172 Identities=22% Similarity=0.272 Sum_probs=93.8
Q ss_pred eeecCCCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChHHHHHHHHHHHHHHH----Hccchh--------HHHhh
Q 021016 61 AEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVI----SAGLPR--------FRKTD 128 (318)
Q Consensus 61 ~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~----~~~~~~--------f~~~d 128 (318)
.+++|.|..|||++.+.... ...+++|+||+||...++.++..+.+.+. +..... +..+.
T Consensus 3 ~sh~~~~~~nqD~~~~~~~~--------~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~ 74 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTDD--------DGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIK 74 (212)
T ss_dssp ----TTSSS--EEEEEE-TC--------CTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeCC--------CCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHH
Confidence 47899999999999965432 33677999999977666666555555443 332211 12233
Q ss_pred HHHHHh---------hhcCCCCCCCceEEEEEeCCeEEEEEeCCceeEE-EeccccCCCCCCccccccceeEEeCcCCCC
Q 021016 129 ESLLQE---------SVSGGWQDGATAVCIWILGRTVFVANIGDAKAVV-ARSSIVDGSNNHLDELSSLKAIVVTRVHKA 198 (318)
Q Consensus 129 ~~~~~~---------~~~~~~~~GsTa~~~~i~~~~l~vanvGDSRa~l-~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~ 198 (318)
..+... ........+||++++++.++.++++|+||||+|+ .+++ ++..+|.||+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g---------------~~~~l~~~~~~ 139 (212)
T PF13672_consen 75 KEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNG---------------EIQQLTDDHSG 139 (212)
T ss_dssp HHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETT---------------EEEE-S---BH
T ss_pred HHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCC---------------EEEEcCCCccc
Confidence 233211 1223345689999999999999999999999965 5666 89999999972
Q ss_pred CChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCCCeeeeceEEEEEeCCCCeEEEEEcCCccCccChHH-HHHH
Q 021016 199 IYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSD-AVEF 277 (318)
Q Consensus 199 ~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~e-i~~~ 277 (318)
+... .++.+.... .....++..+++.++| .|+|||||||+.+.+.+ +..+
T Consensus 140 ----~~~~-------------------~~~~~~~~~-----~~~~~~~~~~~~~~~d-~ilL~SDG~~~~l~~~~~~~~~ 190 (212)
T PF13672_consen 140 ----EYPN-------------------QTRSLTGDD-----PEPDVQYGSIPLEEGD-VILLCSDGVWDNLRSYEDLEQF 190 (212)
T ss_dssp ----HHHH-------------------CTTSCCHHC-----CCTETEEEEEE--TT--EEEEE-HHHHTTS-HHHHHHHH
T ss_pred ----hhhh-------------------hhhccCccc-----cccCCeEEEEEcCCCC-EEEEECcCccccCCCHHHHHHH
Confidence 1110 122322211 1113366677777788 78999999999998655 7777
Q ss_pred HHHHHHh
Q 021016 278 VQKLLKV 284 (318)
Q Consensus 278 v~~~~~~ 284 (318)
+.+..+.
T Consensus 191 l~~~~~~ 197 (212)
T PF13672_consen 191 LKDLWNS 197 (212)
T ss_dssp -------
T ss_pred hhhcccc
Confidence 7666543
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.80 E-value=2.9e-19 Score=179.25 Aligned_cols=219 Identities=25% Similarity=0.341 Sum_probs=177.6
Q ss_pred eeeeeeeeecCCCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChHHHHHHHHHHHHHHHHccchh----------H
Q 021016 55 EIEADAAEDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLPR----------F 124 (318)
Q Consensus 55 ~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~----------f 124 (318)
...+|++...|+|..+--+.....++. .+ ..+.||.+||-+......++...+..++.++.... |
T Consensus 521 ~~t~Gv~~~~gqrnk~c~~~~~v~nf~----~~-~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~f 595 (1081)
T KOG0618|consen 521 LWTYGVAGVSGQRNKVCSRAVWVENFF----LN-PQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTF 595 (1081)
T ss_pred heeeccchhcccccchhhhhhhhhhcc----cC-CcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHH
Confidence 345899999999988877665554431 11 23789999999999999999988888887653222 4
Q ss_pred HHhhHHHHHhhhcCCCCCCCceEEEEEeCC--------eEEEEEeCCceeEEEeccccCCCCCCccccccceeEEeCcCC
Q 021016 125 RKTDESLLQESVSGGWQDGATAVCIWILGR--------TVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVH 196 (318)
Q Consensus 125 ~~~d~~~~~~~~~~~~~~GsTa~~~~i~~~--------~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH 196 (318)
...+.++ ...+...|..++.+.+..+ ++++||+|+|.+++++++ +..++|+-.
T Consensus 596 l~~~rkl----g~~g~~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng---------------~~~p~t~~~ 656 (1081)
T KOG0618|consen 596 LRLNRKL----GEEGQVLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNG---------------KPLPTTRSP 656 (1081)
T ss_pred HHHhhhh----hhhhccccchhhheeecccccCcccchhhhHhhhccchhhhhhcC---------------CcCcccccc
Confidence 4444444 3334455777777777654 689999999999999999 777777655
Q ss_pred -CCCChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCCCeeeeceEEEEEeCCCCeEEEEEcCCccCccChHHHH
Q 021016 197 -KAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAV 275 (318)
Q Consensus 197 -~~~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei~ 275 (318)
...+++|.+||+..+|++.++++++|+...||++|.+...+ .|.+.|+|....+++.|+|||+++-+||++|+-++++
T Consensus 657 ~~~v~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~P-~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~ 735 (1081)
T KOG0618|consen 657 MLEVDREEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLFP-HVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAV 735 (1081)
T ss_pred cccCCHHHHHHHHHhcCeecCCCeeeceeeeeeecccccccc-cccCCCceeeEecccCceEEEEcchHHhhhccHHHHH
Confidence 56699999999999999999999999999999999988887 5999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCcchhhHHHHHHHHHHHH
Q 021016 276 EFVQKLLKVTAHFAFTCQSEKLVDFFMEL 304 (318)
Q Consensus 276 ~~v~~~~~~~~~~~~~~~a~~Lv~~A~~~ 304 (318)
+.+++. . ++=. ||++|++.|++.
T Consensus 736 ~~vRn~---~-dpL~--AAkKL~d~AqSY 758 (1081)
T KOG0618|consen 736 DAVRNV---E-DPLL--AAKKLCDLAQSY 758 (1081)
T ss_pred HHHhcC---C-chHH--HHHHHHHHHHhc
Confidence 999732 2 2333 899999999987
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.74 E-value=1.3e-16 Score=138.27 Aligned_cols=170 Identities=18% Similarity=0.151 Sum_probs=118.7
Q ss_pred CCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChHHHHHHHHHHHHHHHHccch--h----HHHhhHHHHHhhhcCCC
Q 021016 67 RHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVISAGLP--R----FRKTDESLLQESVSGGW 140 (318)
Q Consensus 67 R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~~~~~--~----f~~~d~~~~~~~~~~~~ 140 (318)
....-|.+.+.... ....+|+|+||||+...|.+++..+...+.+.... . +..+++.+... ...
T Consensus 14 ~~~~GD~~~~~~~~-------~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~~~~~~l~~~n~~l~~~---~~~ 83 (193)
T smart00331 14 TQVGGDFYDVVKLP-------EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGISLSQILERLNRAIYEN---GED 83 (193)
T ss_pred HhcCccEEEEEEeC-------CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc---CCC
Confidence 35566887665421 13478999999998888888888888777654322 1 45555555433 244
Q ss_pred CCCCceEEEEE--eCCeEEEEEeCCceeEEEe-ccccCCCCCCccccccceeEEeCcCCCCCChHHHHHHHHcCCEEeeC
Q 021016 141 QDGATAVCIWI--LGRTVFVANIGDAKAVVAR-SSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSN 217 (318)
Q Consensus 141 ~~GsTa~~~~i--~~~~l~vanvGDSRa~l~r-~~~~~g~~~~~~~~~~~~~~~lT~DH~~~~~~E~~ri~~~gg~v~~~ 217 (318)
.+|+|++++++ ..++++++|+||+|+|+++ ++ ...+.+.+
T Consensus 84 ~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~---------------~~~~~~~~---------------------- 126 (193)
T smart00331 84 GMFATLFLALYDFAGGTLSYANAGHSPPYLLRADG---------------GLVEDLDD---------------------- 126 (193)
T ss_pred CcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCC---------------CeEEEcCC----------------------
Confidence 57999999998 5778999999999999998 44 44455544
Q ss_pred CeecCeeeccccccCccCCCCCeeeeceEEEEEeCCCCeEEEEEcCCccCccChHHHHHHHHHHHHhcCCcchhhHHHHH
Q 021016 218 GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKL 297 (318)
Q Consensus 218 ~r~~g~l~vtRalGd~~~k~~~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L 297 (318)
.++.+|... ..++++..+++.++| .|+|+||||||.++.+++.+++.+.. ..+++. +++++
T Consensus 127 --------~~~~lG~~~------~~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~l~~~l~~~~--~~~~~~--~~~~i 187 (193)
T smart00331 127 --------LGAPLGLEP------DVEVDVRELTLEPGD-LLLLYTDGLTEARNPERLEELLEELL--GSPPAE--IAQRI 187 (193)
T ss_pred --------CCceeeeCC------CCcceeEEEeeCCCC-EEEEECCCccccCChHHHHHHHHHhc--CCCHHH--HHHHH
Confidence 234556321 124667788898998 88999999999999999998887653 233455 56766
Q ss_pred HHHHH
Q 021016 298 VDFFM 302 (318)
Q Consensus 298 v~~A~ 302 (318)
.+.++
T Consensus 188 ~~~~~ 192 (193)
T smart00331 188 LEELL 192 (193)
T ss_pred HHHHh
Confidence 66543
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.29 E-value=1e-10 Score=120.88 Aligned_cols=185 Identities=15% Similarity=0.074 Sum_probs=120.5
Q ss_pred ceeeeeeee-eecCCCCCCCceEEEecCCCCCCCCCCcceEEEEEcCCCChHHHHHHHHHHHHHHHH---ccch---hHH
Q 021016 53 FVEIEADAA-EDKGSRHTMEDASVVLVDASSDSPPNLRCAHFAIFDGHGGRLAAEYAQKRLHANVIS---AGLP---RFR 125 (318)
Q Consensus 53 ~~~~~~~~~-s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~gV~DGhGG~~as~~a~~~l~~~l~~---~~~~---~f~ 125 (318)
.+.+.+|++ ..++.+..+.|.+.+.... ....+++|+||+|....|..++....+.+.+ ...+ .+.
T Consensus 549 ~~~~~~g~a~~~k~g~~vsGD~y~~~~l~-------~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~~~~ai~ 621 (764)
T TIGR02865 549 KYHVSTGVARAAKDGELVSGDSYSFGKLS-------AGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFDREVAIK 621 (764)
T ss_pred ceeehhhHHHhcCCCCcccCceEEEEEEC-------CCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 355555555 3455678899999875421 1236789999999555555555555444332 2211 144
Q ss_pred HhhHHHHHhhhcCCCCCCCceEEEEEe--CCeEEEEEeCCceeEEEeccccCCCCCCccccccceeEEeCcCCCCCChHH
Q 021016 126 KTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQE 203 (318)
Q Consensus 126 ~~d~~~~~~~~~~~~~~GsTa~~~~i~--~~~l~vanvGDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~~~~~E 203 (318)
.++..+... ....+.+|+.+++++ .+++.++|+|+++.|+.|++ ++.+++..+.|
T Consensus 622 ~lN~~L~~~---~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~---------------~v~~i~s~~lP----- 678 (764)
T TIGR02865 622 TVNSILSLR---STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGA---------------KVEVIRSSNLP----- 678 (764)
T ss_pred HHHHHHHhC---CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECC---------------EEEEecCCCce-----
Confidence 455544322 223457999999886 57899999999999999988 78887654432
Q ss_pred HHHHHHcCCEEeeCCeecCeeeccccccCccCCCCCeeeeceEEEEEeCCCCeEEEEEcCCccCccChHH-----HHHHH
Q 021016 204 RARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILGCDGLWGVFGPSD-----AVEFV 278 (318)
Q Consensus 204 ~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~v~~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~e-----i~~~v 278 (318)
+|-. + ..+++....++.++| +|||+||||||..++++ +.+++
T Consensus 679 --------------------------lGil--~----~~~~~~~~~~L~~GD-~Lll~SDGv~E~~~~~~~~~~~l~~~l 725 (764)
T TIGR02865 679 --------------------------IGIL--D----EVDVELVRKKLKNGD-LIVMVSDGVLEGEKEVEGKVLWLVRKL 725 (764)
T ss_pred --------------------------eEec--c----CCccceEEEEeCCCC-EEEEECCCCCcCCcccccHHHHHHHHH
Confidence 2210 1 124566778899999 89999999999887543 44444
Q ss_pred HHHHHhcCCcchhhHHHHHHHHHHHH
Q 021016 279 QKLLKVTAHFAFTCQSEKLVDFFMEL 304 (318)
Q Consensus 279 ~~~~~~~~~~~~~~~a~~Lv~~A~~~ 304 (318)
.+. ...++++ +++.|++.|++.
T Consensus 726 ~~~--~~~~p~e--la~~Il~~a~~~ 747 (764)
T TIGR02865 726 KET--NTNDPEE--IAEYLLEKAKEL 747 (764)
T ss_pred Hhc--CCCCHHH--HHHHHHHHHHHh
Confidence 321 2345677 789999988764
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=98.95 E-value=7.5e-08 Score=83.00 Aligned_cols=157 Identities=15% Similarity=0.126 Sum_probs=89.3
Q ss_pred ceEEEEEcCCCChHHHHHHHHHHHHHHH---Hcc-chh--HHHhhHHHHHhhhcCCCCCCCceEEEEEe--CCeEEEEEe
Q 021016 90 CAHFAIFDGHGGRLAAEYAQKRLHANVI---SAG-LPR--FRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVANI 161 (318)
Q Consensus 90 ~~~~gV~DGhGG~~as~~a~~~l~~~l~---~~~-~~~--f~~~d~~~~~~~~~~~~~~GsTa~~~~i~--~~~l~vanv 161 (318)
..++.|+|+.|-...|.+.+..+...+. ... .+. +..+++.+....... ...+|++++.++ .++++++|+
T Consensus 4 ~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~l~~~~a 81 (193)
T PF07228_consen 4 RYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLDPEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGTLTYANA 81 (193)
T ss_dssp EEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceEEEEeCC
Confidence 3678999999944444444444433332 222 111 455565554333222 356888888876 457999999
Q ss_pred CCceeEEEeccccCCCCCCccccccceeEEeCcCCCCCChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCCCee
Q 021016 162 GDAKAVVARSSIVDGSNNHLDELSSLKAIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVV 241 (318)
Q Consensus 162 GDSRa~l~r~~~~~g~~~~~~~~~~~~~~~lT~DH~~~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~~v~ 241 (318)
|++++++++++. + ....+.....| +|-..-
T Consensus 82 G~~~~l~~~~~~--~-----------~~~~~~~~~~~-------------------------------lG~~~~------ 111 (193)
T PF07228_consen 82 GHPPPLLLRPGG--R-----------EIEQLESEGPP-------------------------------LGIFED------ 111 (193)
T ss_dssp SSSEEEEEETTC--T-----------EEEEETCSSBB-------------------------------CSSSCT------
T ss_pred CCCCEEEEeccc--c-----------ceeecccCccc-------------------------------eeeecc------
Confidence 999999999950 0 33333332221 331111
Q ss_pred eeceEEEEEeCCCCeEEEEEcCCccCccChHHH-------HHHHHHHHHhcCCcchhhHHHHHHHHHHH
Q 021016 242 ATPDIHSFEVTERDHFIILGCDGLWGVFGPSDA-------VEFVQKLLKVTAHFAFTCQSEKLVDFFME 303 (318)
Q Consensus 242 ~~Pdv~~~~l~~~d~~liLaSDGlwd~ls~~ei-------~~~v~~~~~~~~~~~~~~~a~~Lv~~A~~ 303 (318)
.++....+++.++| .|+|+||||+|....+.- .+++.+. ...+++. +++.|++.+..
T Consensus 112 ~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~--~~~~~~~--~~~~l~~~~~~ 175 (193)
T PF07228_consen 112 IDYQEQEIQLEPGD-RLLLYTDGLFEALNEDGEFFGEERLLELLDEN--RGLSPQE--IIDALLEAIDR 175 (193)
T ss_dssp TCEEEEEEE--TTE-EEEEECHHHCTTTCHHCHHCCCHHHHHHHHCH--TTS-HHH--HHHHHHHHHHH
T ss_pred ccccceEEEecccc-EEEEeCCChhhccCCccchhHHHHHHHHHhhc--cCCCHHH--HHHHHHHHHHH
Confidence 23445678888888 889999999999844432 3333222 2234455 55666666655
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=96.46 E-value=0.16 Score=48.47 Aligned_cols=163 Identities=17% Similarity=0.083 Sum_probs=95.3
Q ss_pred ceEEEEEcCCC-ChHHHHHHHHH--HHHHHHHc--cchh--HHHhhHHHHHhhhcCCCCCCCceEEEEEe--CCeEEEEE
Q 021016 90 CAHFAIFDGHG-GRLAAEYAQKR--LHANVISA--GLPR--FRKTDESLLQESVSGGWQDGATAVCIWIL--GRTVFVAN 160 (318)
Q Consensus 90 ~~~~gV~DGhG-G~~as~~a~~~--l~~~l~~~--~~~~--f~~~d~~~~~~~~~~~~~~GsTa~~~~i~--~~~l~van 160 (318)
...++|.|..| |-.+|-..... ..+.+... ..+. +.++++.+....... .=+|....+++ ...+..+|
T Consensus 175 ~~~i~I~DvsG~Gv~aal~m~~~~~~~~~~~~~~~~~p~~~l~~~n~~~~~~~~~~---~f~T~~~~~~d~~~~~l~y~~ 251 (367)
T COG2208 175 RLRIGIGDVSGKGVPAALLMLMPKLALRLLLESGPLDPADVLETLNRVLKQNLEED---MFVTLFLGVYDLDSGELTYSN 251 (367)
T ss_pred EEEEEEEeccCCCHHHHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHhcccCC---cEEEEEEEEEeccCCEEEEee
Confidence 46789999998 66555542111 11222222 1111 444454444332222 44777777775 45789999
Q ss_pred eCCceeEEEeccccCCCCCCccccccce--eEEeCcCCCCCChHHHHHHHHcCCEEeeCCeecCeeeccccccCccCCCC
Q 021016 161 IGDAKAVVARSSIVDGSNNHLDELSSLK--AIVVTRVHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF 238 (318)
Q Consensus 161 vGDSRa~l~r~~~~~g~~~~~~~~~~~~--~~~lT~DH~~~~~~E~~ri~~~gg~v~~~~r~~g~l~vtRalGd~~~k~~ 238 (318)
+|=--+++.+.+ + . +..++ ....++|-..
T Consensus 252 aGH~p~~i~~~~---~-----------~~~~~~l~-------------------------------~~g~piG~~~---- 282 (367)
T COG2208 252 AGHEPALILSAD---G-----------EIEVEDLT-------------------------------ALGLPIGLLP---- 282 (367)
T ss_pred CCCCCeeEEEcC---C-----------CceeEEcc-------------------------------CCCceeeecC----
Confidence 999888888876 0 1 11111 2334455211
Q ss_pred CeeeeceEEEEEeCCCCeEEEEEcCCccC-------ccChHHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHHHHhhCCc
Q 021016 239 GVVATPDIHSFEVTERDHFIILGCDGLWG-------VFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMELIILSGWF 311 (318)
Q Consensus 239 ~v~~~Pdv~~~~l~~~d~~liLaSDGlwd-------~ls~~ei~~~v~~~~~~~~~~~~~~~a~~Lv~~A~~~i~~~~~~ 311 (318)
-..+.+...++.++| .++|-|||+.+ .+..+...+++.+. ...++++ +++.+.+...++.-...|+
T Consensus 283 --~~~~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~--~~~~~~e--~~~~i~~~l~~~~~~~~~~ 355 (367)
T COG2208 283 --DYQYEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGLERLLKILGRL--LGQPAEE--ILEAILESLEELQGDQIQD 355 (367)
T ss_pred --CccchheeEEecCCC-EEEEEcCCeeeeecCCccEecHHHHHHHHHHH--hCCCHHH--HHHHHHHHHHHhhCCcccc
Confidence 123456678888887 89999999999 55666677777652 2344555 6678877777765444443
No 20
>PF12095 DUF3571: Protein of unknown function (DUF3571); InterPro: IPR021954 This family of proteins is functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 85 to 97 amino acids in length. ; PDB: 2KRX_A.
Probab=78.37 E-value=2.3 Score=31.49 Aligned_cols=61 Identities=26% Similarity=0.457 Sum_probs=37.8
Q ss_pred CCCeEEEEEcCCccCccChHHHHHHHHHHHHhcCCc----------chhhHHHHHHHHHHHHHHhhC----Cccccc
Q 021016 253 ERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAHF----------AFTCQSEKLVDFFMELIILSG----WFPLRL 315 (318)
Q Consensus 253 ~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~~----------~~~~~a~~Lv~~A~~~i~~~~----~~~~~~ 315 (318)
..|.|+||-.+-==..+|.+|+..-+..++.....+ +. .|+.|++.+.++-|-.| |...||
T Consensus 8 ~~d~yVvLEp~~~Eqflt~~Ell~~Lk~~L~~~~~LP~dL~~~~s~~~--qa~~Lldt~CeLeigpg~~lQWyaVRL 82 (83)
T PF12095_consen 8 QEDHYVVLEPGQPEQFLTPEELLEKLKEWLQNQDDLPPDLAKFSSVEE--QAQYLLDTACELEIGPGGYLQWYAVRL 82 (83)
T ss_dssp ----EEEEESSS-SEEE-HHHHHHHHHHHHHHTTTS-HHHHH---HHH--HHHHHHHH---EEEETTEEEEEEE---
T ss_pred ccCCEEEecCCCCcccCCHHHHHHHHHHHHHcCCCCCHHHHhCCCHHH--HHHHHHHhceeeecCCCCEEEEEEEec
Confidence 456688888666656889999999998887764332 33 78999999999977666 888887
No 21
>COG3076 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.79 E-value=20 Score=28.05 Aligned_cols=42 Identities=21% Similarity=0.358 Sum_probs=30.1
Q ss_pred EEEEEcCCccCccChHHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHH-HHhhCCccc
Q 021016 257 FIILGCDGLWGVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFMEL-IILSGWFPL 313 (318)
Q Consensus 257 ~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~~~a~~Lv~~A~~~-i~~~~~~~~ 313 (318)
-+|+|+|-+..+-=+.++++. ..++|+..|-++ ++..||+.|
T Consensus 69 ~~i~C~Diisev~L~aeiIDa---------------Q~e~l~~L~Ek~~~~YDGWGTY 111 (135)
T COG3076 69 DIVICCDIISEVALNAELIDA---------------QVEQLMPLAEKFDVEYDGWGTY 111 (135)
T ss_pred CEEEEeehhhhhhcCHHHHHH---------------HHHHHHHHHHHhCceecCceee
Confidence 478999988766555544321 237888888888 899999976
No 22
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=39.04 E-value=20 Score=25.90 Aligned_cols=22 Identities=9% Similarity=0.283 Sum_probs=15.3
Q ss_pred eCCCCeEEEEEcCCccCccChH
Q 021016 251 VTERDHFIILGCDGLWGVFGPS 272 (318)
Q Consensus 251 l~~~d~~liLaSDGlwd~ls~~ 272 (318)
+....+.+++|+||+|=.+...
T Consensus 23 l~~~G~Rllva~nGv~lEv~r~ 44 (72)
T PF09436_consen 23 LERPGHRLLVASNGVFLEVRRP 44 (72)
T ss_pred cccCCcEEEEecCcEEEEEech
Confidence 3433447899999999766543
No 23
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=37.65 E-value=39 Score=29.07 Aligned_cols=45 Identities=13% Similarity=0.159 Sum_probs=33.7
Q ss_pred EEEEEcCCcc-----------CccChHHHHHHHHHHHHhcCCcchhhHHHHHHHHHHH
Q 021016 257 FIILGCDGLW-----------GVFGPSDAVEFVQKLLKVTAHFAFTCQSEKLVDFFME 303 (318)
Q Consensus 257 ~liLaSDGlw-----------d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~Lv~~A~~ 303 (318)
-++..|.|+| |+|.++...+.+...-.+..-|.+ +|++|++.-..
T Consensus 73 TvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKe--vA~qLI~MHq~ 128 (237)
T COG3700 73 TVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKE--VARQLIDMHQR 128 (237)
T ss_pred eeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHH--HHHHHHHHHHh
Confidence 6677888887 788888888888765555566777 88999886543
No 24
>PF02260 FATC: FATC domain; InterPro: IPR003152 The FATC domain is found at the C-terminal end of the PIK-related kinases. Members of the family of PIK-related kinases may act as intracellular sensors that govern radial and horizontal pathways [].; GO: 0005515 protein binding; PDB: 2KIT_A 1W1N_A 2KIO_A.
Probab=31.26 E-value=71 Score=19.20 Aligned_cols=21 Identities=24% Similarity=0.547 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHH----HHhhCCccc
Q 021016 293 QSEKLVDFFMEL----IILSGWFPL 313 (318)
Q Consensus 293 ~a~~Lv~~A~~~----i~~~~~~~~ 313 (318)
-+++||+.|... -.+.||-|+
T Consensus 8 qV~~LI~~At~~~nLa~my~GW~pw 32 (33)
T PF02260_consen 8 QVDELISEATDPENLARMYIGWMPW 32 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHCTSS-TT
T ss_pred HHHHHHHHHcCHHHHHHHhcchhcc
Confidence 468888888887 455688764
No 25
>PRK15322 invasion protein OrgB; Provisional
Probab=24.12 E-value=2.3e+02 Score=24.81 Aligned_cols=53 Identities=17% Similarity=0.288 Sum_probs=39.9
Q ss_pred eCCCCeEEEEEcCCccCccChHHHHHHHHHHHHhcCC-cchhhHHHHHHHHHHHHHH
Q 021016 251 VTERDHFIILGCDGLWGVFGPSDAVEFVQKLLKVTAH-FAFTCQSEKLVDFFMELII 306 (318)
Q Consensus 251 l~~~d~~liLaSDGlwd~ls~~ei~~~v~~~~~~~~~-~~~~~~a~~Lv~~A~~~i~ 306 (318)
..++. .+|+|||---=.+|+++.++...+.+....+ ... .|+.|-+.+++-.+
T Consensus 144 yhd~~-rFV~~~g~qIaEFsPq~~v~~a~~~l~~~~d~~~~--~~r~ls~~~l~al~ 197 (210)
T PRK15322 144 YHQEQ-RFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQ--DCRTISDNAINALI 197 (210)
T ss_pred EcCCC-ceEEEeCCchhccCHHHHHHHHHHHHHhCccchHH--HHHHHhHHHHHHHH
Confidence 33444 5588999988999999999998887765544 555 56999988888544
No 26
>PF05785 CNF1: Rho-activating domain of cytotoxic necrotizing factor; InterPro: IPR008430 This entry represents several bacterial cytotoxic necrotizing factor proteins as well as related dermonecrotic toxin (DNT) from Bordetella species. Cytotoxic necrotizing factor 1 (CNF1) is a toxin whose structure from Escherichia coli revealed a 4-layer alpha/beta/beta/alpha structure containing mixed beta-sheets []. CNF1 is expressed in strains of E. coli causing uropathogenic and neonatal meningitis. CNF1 alters host cell actin cytoskeleton and promotes bacterial invasion of the blood-brain barrier endothelial cells []. CNF1 belongs to a unique group of large cytotoxins that cause constitutive activation of Rho guanosine triphosphatases (GTPases), which are key regulators of the actin cytoskeleton []. Bordetella dermonecrotic toxin (DNT) stimulates the assembly of actin stress fibres and focal adhesions by deamidating or polyaminating Gln63 of the small GTPase Rho. DNT is an A-B toxin composed of an N-terminal receptor-binding (B) domain and a C-terminal enzymatically active (A) domain [].; PDB: 1HZG_A 1HQ0_A.
Probab=24.09 E-value=82 Score=28.91 Aligned_cols=26 Identities=15% Similarity=0.244 Sum_probs=19.3
Q ss_pred CCCCCCCceEEEEEeCCeEEEEEeCCc
Q 021016 138 GGWQDGATAVCIWILGRTVFVANIGDA 164 (318)
Q Consensus 138 ~~~~~GsTa~~~~i~~~~l~vanvGDS 164 (318)
.+.-+|||.+.+ +.++.+|..|+|-+
T Consensus 128 sG~LSGCT~i~A-~K~~~~y~~HtGk~ 153 (281)
T PF05785_consen 128 SGALSGCTMIYA-RKDNYFYAYHTGKS 153 (281)
T ss_dssp ---BSS-EEEEE-EETTEEEEEEEEES
T ss_pred CCccCCCEEEEE-EcCCeEEEEEcCCC
Confidence 345679998877 89999999999976
Done!