Your job contains 1 sequence.
>021017
MKNSNSNTKLILLHPYIQKQGTSNRLWLLAFVSFFTIAFLLTLIYTRESISLKTTSGSAA
TMDTKSTSSVSAGFGNPPLPTTVINTLLLYASRSNDSYHMTHSELKRISDVIRKCSSPCN
FLVFGLTQETLLWKALNHNGRTVFIDENRYYAAYFEELHPEIDVFDVQYTTKIRETKELI
ASAKEQIRNECKPVQNLLFSECKLGINDLPNHVYEVDWDVILIDGPRGDGPDGPGRMSPI
FTAGVLARSKKGGNPKTHIFVHDYYRHVERMCGDEFLCKENLVEFNDMLAHFVLEKMDEN
SFEFCRNNNASSRASASS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021017
(318 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2155518 - symbol:IRX15-L "AT5G67210" species:3... 1145 3.4e-116 1
TAIR|locus:2074815 - symbol:IRX15 "AT3G50220" species:370... 1137 2.4e-115 1
TAIR|locus:2047158 - symbol:AT2G15440 "AT2G15440" species... 589 2.8e-57 1
TAIR|locus:2013066 - symbol:AT1G71690 "AT1G71690" species... 412 1.6e-38 1
TAIR|locus:2012728 - symbol:GXMT1 "glucuronoxylan methylt... 358 8.5e-33 1
TAIR|locus:2012350 - symbol:GXM3 "glucuronoxylan methyltr... 351 4.7e-32 1
TAIR|locus:2140518 - symbol:GXM2 "glucuronoxylan methyltr... 339 8.8e-31 1
TAIR|locus:2010449 - symbol:AT1G27930 "AT1G27930" species... 305 3.5e-27 1
TAIR|locus:2019519 - symbol:AT1G67330 "AT1G67330" species... 300 1.2e-26 1
TAIR|locus:2117378 - symbol:AT4G24910 "AT4G24910" species... 284 5.9e-25 1
>TAIR|locus:2155518 [details] [associations]
symbol:IRX15-L "AT5G67210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0009834 "secondary cell wall
biogenesis" evidence=IMP] [GO:0045492 "xylan biosynthetic process"
evidence=RCA;IMP] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] GO:GO:0016021 GO:GO:0005794 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000139 EMBL:AB020742 GO:GO:0009834
GO:GO:0045492 HOGENOM:HOG000238795 InterPro:IPR021148
InterPro:IPR006514 Pfam:PF04669 TIGRFAMs:TIGR01627
ProtClustDB:CLSN2684394 EMBL:BT003079 EMBL:AK227598 IPI:IPI00531113
RefSeq:NP_201522.1 UniGene:At.66656 UniGene:At.9615
ProteinModelPortal:Q9FH92 IntAct:Q9FH92 PRIDE:Q9FH92
EnsemblPlants:AT5G67210.1 GeneID:836856 KEGG:ath:AT5G67210
TAIR:At5g67210 eggNOG:NOG306344 InParanoid:Q9FH92 OMA:EAARNEC
PhylomeDB:Q9FH92 Genevestigator:Q9FH92 Uniprot:Q9FH92
Length = 317
Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
Identities = 214/306 (69%), Positives = 256/306 (83%)
Query: 1 MKNS-NSNTKLILLHPYIQKQGTSNRLWLLAFVSFFTIAFLLTLIYTRESISLKTTSGSA 59
MK+ N+NTKLIL+HPYIQKQ ++NRLWLLAFVSFFTIAFLLTL+YT +SI ++ ++
Sbjct: 1 MKSGGNTNTKLILVHPYIQKQTSTNRLWLLAFVSFFTIAFLLTLLYTTDSII--SSKNNS 58
Query: 60 ATMDTKSTSSVSAGFGNPPLPTTVINTLLLYASRSNDSYHMTHSELKRISDVIRKCSSPC 119
AT+ + S+V+ + LPTT IN +L YASRSNDSYHM++ E+K ISDV+R+CS PC
Sbjct: 59 ATVSSAVNSAVTTATISQ-LPTTAINAMLHYASRSNDSYHMSYGEMKSISDVLRRCSPPC 117
Query: 120 NFLVFGLTQETLLWKALNHNGRTVFIDENRYYAAYFEELHPEIDVFDVQYTTKIRETKEL 179
N LVFGLT ETLLWK+LNHNGRTVFI+ENRYYAAYFEE+HPEI+VFDVQYTTK RE +EL
Sbjct: 118 NLLVFGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIEVFDVQYTTKAREAREL 177
Query: 180 IASAKEQIRNECKPVQNLLFSECKLGINDLPNHVYEVDWDVILIXXXXXXXXXXXXXMSP 239
+++ KE RNEC+PVQNLLFS+CKLG+NDLPNHVY+VDWDVIL+ MS
Sbjct: 178 VSAVKEAARNECRPVQNLLFSDCKLGLNDLPNHVYDVDWDVILVDGPRGDGGDVPGRMSS 237
Query: 240 IFTAGVLARSKKGGNPKTHIFVHDYYRHVERMCGDEFLCKENLVEFNDMLAHFVLEKMDE 299
IFTA VLARSKKGGNPKTH+FVHDYYR VER+CGDEFLC+ENLVE ND+LAH+VLEKMD+
Sbjct: 238 IFTAAVLARSKKGGNPKTHVFVHDYYRDVERLCGDEFLCRENLVESNDLLAHYVLEKMDK 297
Query: 300 NSFEFC 305
NS +FC
Sbjct: 298 NSTQFC 303
>TAIR|locus:2074815 [details] [associations]
symbol:IRX15 "AT3G50220" species:3702 "Arabidopsis
thaliana" [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0009834
"secondary cell wall biogenesis" evidence=IMP] [GO:0045492 "xylan
biosynthetic process" evidence=RCA;IMP] [GO:0010413 "glucuronoxylan
metabolic process" evidence=RCA] GO:GO:0016021 GO:GO:0005794
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000139 GO:GO:0009834
EMBL:AL132976 GO:GO:0045492 HOGENOM:HOG000238795 InterPro:IPR021148
InterPro:IPR006514 Pfam:PF04669 TIGRFAMs:TIGR01627 EMBL:AK221924
EMBL:DQ446752 EMBL:DQ653142 EMBL:AY087437 IPI:IPI00535982
PIR:T45568 RefSeq:NP_190591.1 UniGene:At.1419
ProteinModelPortal:Q9SNE5 EnsemblPlants:AT3G50220.1 GeneID:824184
KEGG:ath:AT3G50220 TAIR:At3g50220 eggNOG:NOG249808
InParanoid:Q9SNE5 OMA:VERACSR PhylomeDB:Q9SNE5
ProtClustDB:CLSN2684394 Genevestigator:Q9SNE5 Uniprot:Q9SNE5
Length = 322
Score = 1137 (405.3 bits), Expect = 2.4e-115, P = 2.4e-115
Identities = 215/310 (69%), Positives = 250/310 (80%)
Query: 1 MKNS--NSNTKLILLHPYIQKQGTSNRLWLLAFVSFFTIAFLLTLIYTRESISLKTTSGS 58
MKN N+NTKLILLHPYIQKQ ++ RLWLLAFVSFFTI FLLTL+YTR++I K TS +
Sbjct: 1 MKNGSGNTNTKLILLHPYIQKQTSTTRLWLLAFVSFFTIVFLLTLLYTRDTIPSKNTSVA 60
Query: 59 AAT---MDTKSTSSVSAGFGNPPLPTTVINTLLLYASRSNDSYHMTHSELKRISDVIRKC 115
AA + ST S S+ N LPT+ IN LL YASRSNDS+HM++ E+K ISDV+R+C
Sbjct: 61 AAVAAVVTGGSTPSASSPISNSNLPTSAINALLHYASRSNDSFHMSYGEMKSISDVLRRC 120
Query: 116 SSPCNFLVFGLTQETLLWKALNHNGRTVFIDENRYYAAYFEELHPEIDVFDVQYTTKIRE 175
+ PCN LVFGLT ETLLWK+LNHNGRTVFI+ENRYYAAYFEE+HPEIDVFDVQYTTK E
Sbjct: 121 APPCNLLVFGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIDVFDVQYTTKAHE 180
Query: 176 TKELIASAKEQIRNECKPVQNLLFSECKLGINDLPNHVYEVDWDVILIXXXXXXXXXXXX 235
EL+ +AKE NEC+PVQNLLFS+CKLG+NDLPNHVY+VDWDVI +
Sbjct: 181 AGELVTAAKEAAGNECRPVQNLLFSDCKLGLNDLPNHVYDVDWDVIFVDGPRGDAHEGPG 240
Query: 236 XMSPIFTAGVLARSKKGGNPKTHIFVHDYYRHVERMCGDEFLCKENLVEFNDMLAHFVLE 295
MS IFTA VLARSKKGG PKTH+FVHDYYR VER+CGDEFLC+ENLVE ND+LAH+VL+
Sbjct: 241 RMSSIFTAAVLARSKKGGTPKTHVFVHDYYRDVERLCGDEFLCRENLVESNDLLAHYVLD 300
Query: 296 KMDENSFEFC 305
KMD+NS +FC
Sbjct: 301 KMDKNSTKFC 310
>TAIR|locus:2047158 [details] [associations]
symbol:AT2G15440 "AT2G15440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006920
HOGENOM:HOG000238795 InterPro:IPR021148 InterPro:IPR006514
Pfam:PF04669 TIGRFAMs:TIGR01627 ProtClustDB:CLSN2684394
EMBL:AY087196 EMBL:BT028994 IPI:IPI00534191 PIR:A84529
RefSeq:NP_565374.1 UniGene:At.64934 ProteinModelPortal:Q9SJN8
PaxDb:Q9SJN8 PRIDE:Q9SJN8 EnsemblPlants:AT2G15440.1 GeneID:816036
KEGG:ath:AT2G15440 TAIR:At2g15440 eggNOG:NOG322815
InParanoid:Q9SJN8 OMA:THESLLW PhylomeDB:Q9SJN8 ArrayExpress:Q9SJN8
Genevestigator:Q9SJN8 Uniprot:Q9SJN8
Length = 329
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 133/310 (42%), Positives = 187/310 (60%)
Query: 1 MKNSNSNTKLILLH---PYIQKQGTS------NRLWLLAFVSFFTIAFLLTLIYTRESIS 51
MK SN+NT LIL H P K ++ +R + F+SFFT+ F +L S S
Sbjct: 1 MK-SNTNTNLILFHHHSPLTSKSPSAVAAANHHRFLFIFFLSFFTLLFSFSLF----SSS 55
Query: 52 LKTTSGSAATMDTKSTSSVSAGFGNPPLPTTVINTLLLYASRSNDSYHMTHSELKRISDV 111
+ +T+ S + + S+SS LP V+ LL Y S S + M+ EL IS++
Sbjct: 56 IHSTTSSHSLSSSPSSSS---------LPPPVLAALLHYTSSSPPNTSMSFLELSTISNI 106
Query: 112 IRKCSSPCNFLVFGLTQETLLWKALNHNGRTVFIDENRYYAAYFEELHPEIDVFDVQYTT 171
I CN L+FGLT E+LLW+++N GRTVF+DE+ Y + FE+ +P ++ ++V Y+T
Sbjct: 107 IHSHGPACNLLIFGLTHESLLWRSINFQGRTVFVDESPYSVSKFEQSNPGVEAYEVVYST 166
Query: 172 KIRETKELIASAKEQIRNECKPVQNLLFSECKLGINDLPNHVYEVDWDVILIXXXXXXXX 231
K+ + K+L+ K R EC+PVQNLLFS+CKLGINDLPN VYE+DWDVILI
Sbjct: 167 KVSQAKKLLGYYKT--RPECRPVQNLLFSDCKLGINDLPNFVYEIDWDVILIDGPRGYAS 224
Query: 232 XXXXXMSPIFTAGVLARSKKGGNP--KTHIFVHDYYRHVERMCGDEFLCKENLVEFNDML 289
M+PIFT+ VLA+SK G KT + VH++ R +ER+ +EFLC+ENL+E L
Sbjct: 225 DSPGRMAPIFTSAVLAKSKDFGTKTKKTDVLVHEFGRKIERVYSEEFLCEENLIEVVGDL 284
Query: 290 AHFVLEKMDE 299
HFV+ +E
Sbjct: 285 GHFVVAAAEE 294
>TAIR|locus:2013066 [details] [associations]
symbol:AT1G71690 "AT1G71690" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC016163 UniGene:At.70348
HOGENOM:HOG000238795 InterPro:IPR021148 InterPro:IPR006514
Pfam:PF04669 TIGRFAMs:TIGR01627 EMBL:BT012133 EMBL:BT012405
EMBL:AK228612 IPI:IPI00539284 RefSeq:NP_565020.1 PaxDb:Q9C9J1
PRIDE:Q9C9J1 EnsemblPlants:AT1G71690.1 GeneID:843495
KEGG:ath:AT1G71690 TAIR:At1g71690 eggNOG:NOG272239
InParanoid:Q9C9J1 OMA:GMIARRR PhylomeDB:Q9C9J1
ProtClustDB:CLSN2917427 Genevestigator:Q9C9J1 Uniprot:Q9C9J1
Length = 295
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 96/275 (34%), Positives = 147/275 (53%)
Query: 23 SNRLWLLAFVSFFTIA-FLLTLIYTRESISLKTTSGSAATMDTKSTSS-VSAGFGNPPLP 80
+ RL L +FVS + F +T S S + + T ST S + + +P
Sbjct: 10 TTRLILSSFVSLVVLTLFFITRTGFSPSSSFHQPLNNTLRISTSSTGSKLQSPRSCNKIP 69
Query: 81 TTVINTLLLYASRSNDSYHMTHSELKRISDVIRKCSSPCNFLVFGLTQETLLWKALNHNG 140
++ + L+ YAS SN + T SE+ + K SPCNFLVFGL ++L+W LNH G
Sbjct: 70 PSLADALVHYAS-SNVTPQQTLSEISVTKKELEK-KSPCNFLVFGLGHDSLMWATLNHGG 127
Query: 141 RTVFIDENRYYAAYFEELHPEIDVFDVQYTTKIRETKELIASAKEQIRNECKPVQ-NLLF 199
RT+F+DE+ + E P ++ + V+Y TK+R+ + L+A+ K+ R EC+ V +L
Sbjct: 128 RTIFLDEDESWIHQIAEKFPSLESYHVRYKTKVRDAEALMAATKD--REECRRVSTDLRV 185
Query: 200 SECKLGINDLPNHVYEVDWDVILIXXXXXXXXXXXXXMSPIFTAGVLARSKKGGNPKTHI 259
S C+L + LP VYE +WD+I++ MS I+TAG++AR +K T +
Sbjct: 186 STCELALKGLPEVVYETEWDLIMVDAPTGFHEEAPGRMSAIYTAGMIARRRKDEEETTAV 245
Query: 260 FVHDYYRHVERMCGDEFLCKENLVEFNDMLAHFVL 294
FVHD R VE EFLC++ + + L HF +
Sbjct: 246 FVHDVDRKVEDEFSMEFLCRDYMTKQEGRLRHFTV 280
>TAIR|locus:2012728 [details] [associations]
symbol:GXMT1 "glucuronoxylan methyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005976 "polysaccharide metabolic process" evidence=IDA]
[GO:0009808 "lignin metabolic process" evidence=IMP] [GO:0030775
"glucuronoxylan 4-O-methyltransferase activity" evidence=IDA]
[GO:0045491 "xylan metabolic process" evidence=IMP] GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0000139
GO:GO:0009808 EMBL:AC010164 eggNOG:NOG295524 HOGENOM:HOG000238795
GO:GO:0030775 GO:GO:0045491 InterPro:IPR021148 InterPro:IPR006514
Pfam:PF04669 TIGRFAMs:TIGR01627 ProtClustDB:CLSN2685653
EMBL:JX914596 EMBL:AY070772 EMBL:AY097395 EMBL:AY084664
IPI:IPI00530574 PIR:E86461 RefSeq:NP_564428.1 UniGene:At.28328
ProteinModelPortal:Q9LQ32 IntAct:Q9LQ32 PaxDb:Q9LQ32 PRIDE:Q9LQ32
EnsemblPlants:AT1G33800.1 GeneID:840272 KEGG:ath:AT1G33800
TAIR:At1g33800 InParanoid:Q9LQ32 OMA:MELGRSE PhylomeDB:Q9LQ32
Genevestigator:Q9LQ32 Uniprot:Q9LQ32
Length = 297
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 77/216 (35%), Positives = 123/216 (56%)
Query: 79 LPTTVINTLLLYASRSNDSYHMTHSELKRISDVIRKCSSPCNFLVFGLTQETLLWKALNH 138
+P ++ + L+ Y + SN + T E+ V+ K SPCNFLVFGL ++L+W +LNH
Sbjct: 69 MPLSLSDALVHYVT-SNVTPQQTFDEVSVSKRVLDK-KSPCNFLVFGLGHDSLMWASLNH 126
Query: 139 NGRTVFIDENRYYAAYFEELHPEIDVFDVQYTTKIRETKELIASAKEQIRNECKPVQNLL 198
GRT+FI+E++ + A + P ++ + V Y TK++++ +L+ + + EC+ V +
Sbjct: 127 GGRTLFIEEDQAWIAIVTKKFPNLESYHVVYDTKVKDSDKLMELGRSE---ECRSVSDPR 183
Query: 199 FSECKLGINDLPNHVYEVDWDVILIXXXXXXXXXXXXXMSPIFTAGVLARSKKGGNPKTH 258
S+C L + D P YE WD+I++ MS I+TAG+LAR+++ G +T
Sbjct: 184 NSKCDLALKDFPADFYETKWDLIMVDAPTGYHEEAPGRMSAIYTAGLLARNREDG--ETD 241
Query: 259 IFVHDYYRHVERMCGDEFLCKENLVEFNDMLAHFVL 294
+FVHD R VE FLCK + E N L HF +
Sbjct: 242 VFVHDVNRPVEDEFSATFLCKGYMREQNGRLRHFTI 277
>TAIR|locus:2012350 [details] [associations]
symbol:GXM3 "glucuronoxylan methyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0030775 "glucuronoxylan 4-O-methyltransferase activity"
evidence=IDA] [GO:0045491 "xylan metabolic process" evidence=IMP]
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000139 EMBL:AC003970 EMBL:JX914594 EMBL:BT010727
EMBL:BT011658 IPI:IPI00523203 RefSeq:NP_172432.1 UniGene:At.10219
UniGene:At.66929 ProteinModelPortal:Q6NMK1
EnsemblPlants:AT1G09610.1 GeneID:837488 KEGG:ath:AT1G09610
TAIR:At1g09610 eggNOG:NOG295524 HOGENOM:HOG000238795
InParanoid:Q6NMK1 OMA:GPECTAI PhylomeDB:Q6NMK1
ProtClustDB:CLSN2679278 Genevestigator:Q6NMK1 GO:GO:0030775
GO:GO:0045491 InterPro:IPR021148 InterPro:IPR006514 Pfam:PF04669
TIGRFAMs:TIGR01627 Uniprot:Q6NMK1
Length = 282
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 87/280 (31%), Positives = 145/280 (51%)
Query: 23 SNRLWLLAFVSFFTIAFLLTLIYTRESISLKTTSGSAAT-MDTKSTSSVSAGFGNPPLPT 81
+N+ L + F +A L+ + R ++ T+S T +T+ST +G N LP
Sbjct: 5 ANQNHKLKVLLVFLLATLILIFIVRSTL---TSSQEHQTPQETRSTRC--SGACNK-LPR 58
Query: 82 TVINTLLLYASRSNDSYHMTHSELKRISDVIRKCSSPCNFLVFGLTQETLLWKALNHNGR 141
++ L+ Y S S + T E+ S V+ K SPCNFLVFGL ++L+W +LN+ GR
Sbjct: 59 SLAQALIHY-STSVITPQQTLKEIAVSSRVLGK-KSPCNFLVFGLGHDSLMWSSLNYGGR 116
Query: 142 TVFIDENRYYAAYFEELHPEIDVFDVQYTTKIRETKELIASAKEQIRNECKPVQNLLFSE 201
TVF++E+ + + P ++ + V Y +K+ + LI K EC + + +S
Sbjct: 117 TVFLEEDEAWIKQIKRRFPMLESYHVTYDSKVNQADNLIEVGKGP---ECTAIGDPRYSM 173
Query: 202 CKLGINDLPNHVYEVDWDVILIXXXXXXXXXXXXXMSPIFTAGVLARSKKGGNPKTHIFV 261
C+L + LP +YE WD+I++ M+ I+TAG++AR++K G +T +FV
Sbjct: 174 CQLALKGLPAEIYETGWDLIMVDAPTGYYDEAPGRMTAIYTAGMMARNRKQGG-ETDVFV 232
Query: 262 HDYYRHVERMCGDEFLCKENLVEFNDMLAHFVLEKMDENS 301
HD R +E FLC+ + + L HF++ + S
Sbjct: 233 HDVNREIEDKFSKAFLCEGYMKKQEGRLRHFIIPSYRDGS 272
>TAIR|locus:2140518 [details] [associations]
symbol:GXM2 "glucuronoxylan methyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0010054 "trichoblast differentiation"
evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0030775 "glucuronoxylan 4-O-methyltransferase activity"
evidence=IDA] [GO:0045491 "xylan metabolic process" evidence=IMP]
GO:GO:0016021 GO:GO:0005794 GO:GO:0000139 EMBL:CP002687
EMBL:AL161516 EMBL:AL049481 HOGENOM:HOG000238795 GO:GO:0030775
GO:GO:0045491 InterPro:IPR021148 InterPro:IPR006514 Pfam:PF04669
TIGRFAMs:TIGR01627 EMBL:JX914595 EMBL:BT030090 IPI:IPI00521002
PIR:T04003 RefSeq:NP_192737.1 UniGene:At.33659
ProteinModelPortal:Q9T0F7 PRIDE:Q9T0F7 EnsemblPlants:AT4G09990.1
GeneID:826590 KEGG:ath:AT4G09990 TAIR:At4g09990 InParanoid:Q9T0F7
OMA:RTEDCKA PhylomeDB:Q9T0F7 ProtClustDB:CLSN2685653
Genevestigator:Q9T0F7 Uniprot:Q9T0F7
Length = 290
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 85/257 (33%), Positives = 130/257 (50%)
Query: 36 TIAFLLTLIYTRESISLKTTSGSAATMDTKSTSSVSAGFGNPPLPTTVINTLLLYASRSN 95
+I L L R S S +T+ KS S LPT++ + L+ Y + S
Sbjct: 19 SILVLFILFLKRASFSSNSTATIRDEYHQKSKCP-STPQQCTKLPTSLSDALVHYVT-SE 76
Query: 96 DSYHMTHSELKRISDVIRKCSSPCNFLVFGLTQETLLWKALNHNGRTVFIDENRYYAAYF 155
+ T E+ V+ K SPCNFLVFGL ++L+W +LNH GRT+F++E+ +
Sbjct: 77 ITPQQTFDEVSVSKRVLDK-KSPCNFLVFGLGHDSLMWASLNHGGRTLFLEEDEAWIETV 135
Query: 156 EELHPEIDVFDVQYTTKIRETKELIASAKEQIRNECKPVQNLLFSECKLGINDLPNHVYE 215
+ P ++ + V Y TK++++ +L+ + + +CK V + S+C L + P VYE
Sbjct: 136 TKKFPNLESYHVVYDTKVKDSNKLMELKRTE---DCKAVSDPRDSKCALSLKGFPADVYE 192
Query: 216 VDWDVILIXXXXXXXXXXXXXMSPIFTAGVLARSKKGGNPKTHIFVHDYYRHVERMCGDE 275
WDVI++ MS I+TAG+LAR++ G +T +FVHD R VE
Sbjct: 193 TQWDVIMVDAPTGYHDEAPGRMSAIYTAGLLARNRYDGG-ETDVFVHDINRPVEDEFSVA 251
Query: 276 FLCKENLVEFNDMLAHF 292
FLC + E L HF
Sbjct: 252 FLCGGYMKEQQGRLRHF 268
>TAIR|locus:2010449 [details] [associations]
symbol:AT1G27930 "AT1G27930" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0005515
"protein binding" evidence=IPI] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006857 "oligopeptide transport" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] EMBL:CP002684 GO:GO:0005794 GO:GO:0005768
EMBL:AC069471 GO:GO:0005802 InterPro:IPR021148 InterPro:IPR006514
Pfam:PF04669 TIGRFAMs:TIGR01627 EMBL:AY050385 EMBL:AY124820
IPI:IPI00543539 PIR:F86404 RefSeq:NP_564297.1 UniGene:At.24903
ProteinModelPortal:Q9C7F9 PRIDE:Q9C7F9 EnsemblPlants:AT1G27930.1
GeneID:839686 KEGG:ath:AT1G27930 TAIR:At1g27930 InParanoid:Q9C7F9
OMA:APKGYFA PhylomeDB:Q9C7F9 ProtClustDB:CLSN2681974
Genevestigator:Q9C7F9 Uniprot:Q9C7F9
Length = 289
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 80/294 (27%), Positives = 151/294 (51%)
Query: 23 SNRLWLLAFVSFFTIAFLL--TLIYTRESISLKTTSGSAATMDTKSTS-SVSAGFGNPPL 79
S + W++ V +A L+ L++T + T +T KS + + +A + P+
Sbjct: 7 SEKRWIITGV---LLAGLVGGALLFTSFIRAADETLFLCSTASAKSRAVAAAADYEATPI 63
Query: 80 PTTVINTLLLYASRSNDSYHMTHSELKRISDVIRKCSSPCNFLVFGLTQETLLWKALNHN 139
+ ++ YA+ SN +E+ ++++K + P NFLVFGL +++L+W +LN
Sbjct: 64 Q---LQAIVHYAT-SNVVPQQNLAEISISFNILKKLA-PANFLVFGLGRDSLMWASLNPR 118
Query: 140 GRTVFIDENRYYAAYFEELHPEIDVFDVQYTTKIRETKELIASAKEQIRNECKPVQNLLF 199
G+T+F++E+ + + P + V+Y T++++ L+ S K + + C P ++ L
Sbjct: 119 GKTLFLEEDLEWFQKVTKDSPFLRAHHVRYRTQLQQADSLLRSYKTEPK--CFPAKSYLR 176
Query: 200 S--ECKLGINDLPNHVYEVDWDVILIXXXXXXXXXXXXXMSPIFTAGVLARSKKGGNPKT 257
+CKL + LP+ Y+ +WD++++ M+ IF+A V+AR++K T
Sbjct: 177 GNEKCKLALTGLPDEFYDTEWDLLMVDAPKGYFAEAPGRMAAIFSAAVMARNRKKPGV-T 235
Query: 258 HIFVHDYYRHVERMCGDEFLCKENLVEFNDMLAHFVLEK------MDENSFEFC 305
H+F+HD R VE+ +EFLC++ V L HF + +D + FC
Sbjct: 236 HVFLHDVNRRVEKTFAEEFLCRKYRVNAAGRLWHFAIPPAAANATIDSGDYRFC 289
>TAIR|locus:2019519 [details] [associations]
symbol:AT1G67330 "AT1G67330" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0010167 "response to nitrate" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] [GO:0005768
"endosome" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0005768
GO:GO:0005802 EMBL:AC002130 HOGENOM:HOG000238795 InterPro:IPR021148
InterPro:IPR006514 Pfam:PF04669 TIGRFAMs:TIGR01627
ProtClustDB:CLSN2681974 EMBL:BT011227 EMBL:BT012155 EMBL:AK227306
IPI:IPI00539945 RefSeq:NP_176901.1 UniGene:At.22685 PaxDb:Q9FYG0
PRIDE:Q9FYG0 EnsemblPlants:AT1G67330.1 GeneID:843054
KEGG:ath:AT1G67330 TAIR:At1g67330 eggNOG:NOG289948
InParanoid:Q9FYG0 OMA:FANEFLC PhylomeDB:Q9FYG0
Genevestigator:Q9FYG0 Uniprot:Q9FYG0
Length = 291
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 87/299 (29%), Positives = 150/299 (50%)
Query: 19 KQGTSNRLWLLAFVSFFTI--AFLLTLIY--TRESISLKTTSGSAATMDTKSTSSVSAGF 74
KQ R W LA I A L+T T ++SL +T+ + A K T++
Sbjct: 10 KQTLLERPWFLAVALAGLIGGAMLITSFIRATDNTLSLCSTAKNTAASIAKYTAT----- 64
Query: 75 GNPPLPTTVINTLLLYASRSNDSYHMTHSELKRISDVIRKCSSPCNFLVFGLTQETLLWK 134
P+ + +++ YA+ S+ + E+ +V+++ PCNFLVFGL +++L+W
Sbjct: 65 ---PIQ---LQSIVHYAT-SHTVPQQSFEEISISLNVLKE-RLPCNFLVFGLGRDSLMWA 116
Query: 135 ALNHNGRTVFIDEN-RYYAAYFEELHPEIDVFDVQYTTKIRETKELIASAKEQIRNECKP 193
+LN G TVF++E+ + A ++ P + VQY T + E L+++ K + C P
Sbjct: 117 SLNPGGTTVFLEEDPEWIEAVLKDA-PSLRAHHVQYRTHLSEAGRLLSTYKNEPM--CLP 173
Query: 194 VQN--LLFSE-CKLGINDLPNHVYEVDWDVILIXXXXXXXXXXXXXMSPIFTAGVLARSK 250
+ + ++E C L + LP+ Y+ +WD+I++ M+ IF++ ++AR++
Sbjct: 174 AKAFPIRYNEKCPLALTSLPDEFYDTEWDLIMVDAPKGYFPEAPGRMAAIFSSAIMARNR 233
Query: 251 KGGNPKTHIFVHDYYRHVERMCGDEFLCKENLVEFNDMLAHFVLEKM----DENSFEFC 305
KG TH+F+HD R VE +EFLC++ V L HF + D+ FC
Sbjct: 234 KGDGT-THVFLHDVNRKVENAFANEFLCEKYKVNSVGRLWHFEIPNAANMTDQPGDRFC 291
>TAIR|locus:2117378 [details] [associations]
symbol:AT4G24910 "AT4G24910" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002687 EMBL:AL161562 EMBL:AL035523
InterPro:IPR021148 InterPro:IPR006514 Pfam:PF04669
TIGRFAMs:TIGR01627 EMBL:DQ446866 IPI:IPI00536243 PIR:T05512
RefSeq:NP_194221.1 UniGene:At.65420 ProteinModelPortal:Q9SW35
EnsemblPlants:AT4G24910.1 GeneID:828593 KEGG:ath:AT4G24910
TAIR:At4g24910 InParanoid:Q9SW35 OMA:INTRGIT PhylomeDB:Q9SW35
ProtClustDB:CLSN2685627 Genevestigator:Q9SW35 Uniprot:Q9SW35
Length = 315
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 87/279 (31%), Positives = 129/279 (46%)
Query: 35 FTIAFLLTL-IYTRESISLKTTSGSAATMDTKSTSSVSAGFGNPPLPTTVINTLLLYASR 93
FT+ L+ L I+ S+S+ + +KS SS S F P ++ R
Sbjct: 41 FTVRKLIPLLIFVLSSLSVLRLLRISYKSSSKSQSSSSTTFRLSPADSS-------QQLR 93
Query: 94 SNDS-YHMTHSELKRISDVIRKCSSPCNFLVFGLTQETLLWKALNHNGRTVFI-DENRYY 151
+N+ + ELK +SD + + SPCN LVFG + L+ ++N G TV + DE
Sbjct: 94 ANEGPTALMEKELKLLSDTVTR-RSPCNILVFGFAPQYLMLSSINTRGITVILEDEPAKI 152
Query: 152 AAYFEELHPE-IDVFDVQY-TTKIRETKELIASAKEQIRNECKPVQNLLF---SECKLGI 206
E++P ++ ++Y ++R L+ A+ C P N S+CKL +
Sbjct: 153 MIPKAEVNPNNTRIYSLKYHQMEVRNAYNLLQHARAN--PACAPNMNNQHQGSSDCKLEL 210
Query: 207 NDLPNHVYEVDWDVILIXXXXXXXXXXXXXMSPIFTAGVLARSKKGGNPKTHIFVHDYYR 266
DLP V+ WDVI++ M I+TA VLAR K N T +FVHD +R
Sbjct: 211 RDLPQQVHNTKWDVIVVDGPRGDDLETPGRMGSIYTAAVLAR-KGSSNSTTDVFVHDVHR 269
Query: 267 HVERMCGDEFLCKENLVEFNDMLAHFVLEKMDENSFEFC 305
E+ EFLC+ENLV F + K N+ FC
Sbjct: 270 TAEKWLSWEFLCQENLVSAKGTFWKFRI-KRQSNASRFC 307
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 318 292 0.00090 115 3 11 22 0.49 33
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 618 (66 KB)
Total size of DFA: 224 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.04u 0.23s 27.27t Elapsed: 00:00:01
Total cpu time: 27.04u 0.23s 27.27t Elapsed: 00:00:01
Start: Fri May 10 21:26:44 2013 End: Fri May 10 21:26:45 2013