BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021023
(318 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HJU|A Chain A, Crystal Structure Of Human Monoglyceride Lipase
pdb|3HJU|B Chain B, Crystal Structure Of Human Monoglyceride Lipase
Length = 342
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 16/314 (5%)
Query: 8 NIKY-DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGY 66
+I Y D ++N+ LF W P PKALIF+ HG A E S A L
Sbjct: 31 SIPYQDLPHLVNADGQYLFCRYWKPTGT-PKALIFVSHG-AGEHSGRYEELARMLMGLDL 88
Query: 67 ACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMV 126
+ D+ GHG+S G + +F V D H S+ +++ +LLG SMGGA+
Sbjct: 89 LVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHSMGGAIA 146
Query: 127 LLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAF 186
+L ++P +F G VL++P+ +A + L +P + P V
Sbjct: 147 ILTAAERPGHFAGMVLISPLV-LANPESATTFKVLAAKVLNLVLPNLSLGPIDSSV---- 201
Query: 187 KLPEKRKEI---RANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVT 243
L + E+ ++P + ++ G +L+ +E L ++++PF++L G D++
Sbjct: 202 -LSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLC 260
Query: 244 DKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVAT-GNSR 302
D + L ++A S DKT+K+YEG +H +L+ E E T VF +I W+ +R AT G +
Sbjct: 261 DSKGAYLLMELAKSQDKTLKIYEGAYH-VLHKELPEVTNSVFHEINMWVSQRTATAGTAS 319
Query: 303 IEMELKHNNDDLIS 316
+E+ D +S
Sbjct: 320 PPLEVDLQGDHGLS 333
>pdb|3PE6|A Chain A, Crystal Structure Of A Soluble Form Of Human Mgll In
Complex With An Inhibitor
Length = 303
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 143/299 (47%), Gaps = 15/299 (5%)
Query: 7 HNIKY-DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEG 65
+I Y D ++N+ LF W P PKALIF+ HG A E S A L
Sbjct: 12 QSIPYQDLPHLVNADGQYLFCRYWAPTGT-PKALIFVSHG-AGEHSGRYEELARMLMGLD 69
Query: 66 YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAM 125
+ D+ GHG+S G + +F V D H S+ +++ +LLG SMGGA+
Sbjct: 70 LLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHSMGGAI 127
Query: 126 VLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVA 185
+L ++P +F G VL++P+ +A + L +P P V
Sbjct: 128 AILTAAERPGHFAGMVLISPLV-LANPESATTFKVLAAKVLNSVLPNLSSGPIDSSV--- 183
Query: 186 FKLPEKRKEI---RANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKV 242
L + E+ ++P + ++ G +L+ +E L ++++PF++L G D++
Sbjct: 184 --LSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRL 241
Query: 243 TDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVATGNS 301
D + L ++A S DKT+K+YEG +H +L+ E E T VF +I W+ +R AT +
Sbjct: 242 CDSKGAYLLMELAKSQDKTLKIYEGAYH-VLHKELPEVTNSVFHEINMWVSQRTATAGT 299
>pdb|3JWE|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
pdb|3JWE|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
Length = 320
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 144/299 (48%), Gaps = 15/299 (5%)
Query: 7 HNIKY-DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEG 65
+I Y D ++N+ LF W P PKALIF+ HG A E S A L
Sbjct: 29 QSIPYQDLPHLVNADGQYLFCRYWKPTGT-PKALIFVSHG-AGEHSGRYEELARMLMGLD 86
Query: 66 YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAM 125
+ D+ GHG+S G + +F V D H S+ +++ +LLG SMGGA+
Sbjct: 87 LLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSM--QKDYPGLPVFLLGHSMGGAI 144
Query: 126 VLLLHRKKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVA 185
+L ++P +F G VL++P+ +A + L +P + P V
Sbjct: 145 AILTAAERPGHFAGMVLISPLV-LANPESATTFKVLAAKVLNLVLPNLSLGPIDSSV--- 200
Query: 186 FKLPEKRKEI---RANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKV 242
L + E+ ++P + ++ G +L+ +E L ++++PF++L G D++
Sbjct: 201 --LSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRL 258
Query: 243 TDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVATGNS 301
D + L ++A S DKT+K+YEG +H +L+ E E T VF +I W+ +R AT +
Sbjct: 259 CDSKGAYLLMELAKSQDKTLKIYEGAYH-VLHKELPEVTNSVFHEINMWVSQRTATAGT 316
>pdb|3JW8|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase
pdb|3JW8|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase
Length = 320
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 14/293 (4%)
Query: 12 DEEFILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGI 71
D ++N+ LF W P PKALIF+ HG A E S A L +
Sbjct: 35 DLPHLVNADGQYLFCRYWKPTGT-PKALIFVSHG-AGEHSGRYEELARXLXGLDLLVFAH 92
Query: 72 DYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHR 131
D+ GHG+S G + +F V D H S +++ +LLG S GGA+ +L
Sbjct: 93 DHVGHGQSEGERXVVSDFHVFVRDVLQHVDS--XQKDYPGLPVFLLGHSXGGAIAILTAA 150
Query: 132 KKPDYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEK 191
++P +F G VL++P+ +A + L +P + P V L
Sbjct: 151 ERPGHFAGXVLISPLV-LANPESATTFKVLAAKVLNLVLPNLSLGPIDSSV-----LSRN 204
Query: 192 RKEI---RANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVS 248
+ E+ ++P + ++ G +L+ +E L ++++PF++L G D++ D +
Sbjct: 205 KTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGA 264
Query: 249 VQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWLDERVATGNS 301
L ++A S DKT+K+YEG +H +L+ E E T VF +I W+ +R AT +
Sbjct: 265 YLLXELAKSQDKTLKIYEGAYH-VLHKELPEVTNSVFHEINXWVSQRTATAGT 316
>pdb|4DGQ|A Chain A, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|B Chain B, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|C Chain C, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
Length = 280
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 115/296 (38%), Gaps = 56/296 (18%)
Query: 22 VKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAG 81
V++F W P++ + +I HG+ + S ++ + N+G+ D +GHG+S+
Sbjct: 14 VEIFYKDWGPRDAK---VIHFHHGWPL-SSDDWDAQLLFFVNKGFRVVAHDRRGHGRSSQ 69
Query: 82 L-SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGA-MVLLLHRKKPDYFDG 139
+ G+ + D DD ++ EK M +G S GG +V + R
Sbjct: 70 VWDGH--DMDHYADDA----AAVVEKLGTHGAMH--VGHSTGGGEVVRYIARHGERNVSK 121
Query: 140 AVLVA--PMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRA 197
AVL++ P + + P+ SV VA + ++ A
Sbjct: 122 AVLISSVPPLMVKTSSNPNGTPKSVFDDFQ--------------AHVAANRAQFYLDVPA 167
Query: 198 NPYCYKGRPRLKTG----YELMRVSM-----------------DLENRLDEVSIPFIVLH 236
P+ RP K Y R M D N L ++IP +V+H
Sbjct: 168 GPFYGYNRPGAKPSEGVIYNWWRQGMMGSTKAQYDGIVAFSQTDFTNDLKGITIPVLVIH 227
Query: 237 GEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWHGLLYGEPEENTQIVFRDILNWL 292
G++D+V A S L + K + Y+G HG+ P + V D+L +L
Sbjct: 228 GDDDQVVPYADSGVLSAKLVKNGKLI-TYKGAPHGI----PTTHADKVNADLLEFL 278
>pdb|1A88|A Chain A, Chloroperoxidase L
pdb|1A88|B Chain B, Chloroperoxidase L
pdb|1A88|C Chain C, Chloroperoxidase L
Length = 275
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 106/277 (38%), Gaps = 30/277 (10%)
Query: 16 ILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75
+ S +F W P++ P + HG+ + N L++ GY D +G
Sbjct: 3 VTTSDGTNIFYKDWGPRDGLP---VVFHHGWPLSADDWDNQMLFFLSH-GYRVIAHDRRG 58
Query: 76 HGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVL-LLHRKKP 134
HG+S S D +D ++ E + + + +G S GG V + R +P
Sbjct: 59 HGRSDQPSTGHD-----MDTYAADVAALTEALDLRGAVH--IGHSTGGGEVARYVARAEP 111
Query: 135 DYFDGAVLVA--PMCKIAENVKPHPLVISVLTKLCKFIPTWKI-----IPSQDIVDVAFK 187
AVLV+ P + + P L + V + + + +PS +
Sbjct: 112 GRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYIDVPSGPFYGFNRE 171
Query: 188 LPEKRKEIRANPYCYKGRPRLKTGYELMRV--SMDLENRLDEVSIPFIVLHGEEDKVTDK 245
+ + + + YE + D + L + +P +V HG +D+V
Sbjct: 172 GATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDDQVVPY 231
Query: 246 A----VSVQLFKVASSSDKTMKLYEGMWHGLLYGEPE 278
A S +L ++ T+K YEG+ HG+L PE
Sbjct: 232 ADAAPKSAELL-----ANATLKSYEGLPHGMLSTHPE 263
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 98/249 (39%), Gaps = 31/249 (12%)
Query: 40 IFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAG-LSGYIDNFDDLVDDCFN 98
I HG+ + S I LA +GY D +GHG+S+ SG ++ D DD
Sbjct: 22 IVFSHGWPLNAD-SWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSG--NDMDTYADD--- 75
Query: 99 HFTSICEKEENKEKMRYLLGESMGGAMV---LLLHRKKPDYFDGAVLVAPMCKIAENVKP 155
+ E + ++ + L G S GG V + H G + P + P
Sbjct: 76 -LAQLIEHLDLRDAV--LFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANP 132
Query: 156 HPLVISVL-----TKLCKFIPTWKIIPSQDIVDVAFKLP-EKRKEIRANPYCYKG-RPRL 208
L + V L +K + S F P K + + +G
Sbjct: 133 GGLPMEVFDGIRQASLADRSQLYKDLASGPFF--GFNQPGAKSSAGMVDWFWLQGMAAGH 190
Query: 209 KTGYELMRV--SMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSS---DKTMK 263
K Y+ ++ D L ++ +P +V+HG+ D+V V ++ +AS++ T+K
Sbjct: 191 KNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQV----VPIEASGIASAALVKGSTLK 246
Query: 264 LYEGMWHGL 272
+Y G HGL
Sbjct: 247 IYSGAPHGL 255
>pdb|2WTM|A Chain A, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|B Chain B, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|C Chain C, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTM|D Chain D, Est1e From Butyrivibrio Proteoclasticus
pdb|2WTN|A Chain A, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
pdb|2WTN|B Chain B, Ferulic Acid Bound To Est1e From Butyrivibrio
Proteoclasticus
Length = 251
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 43/239 (17%)
Query: 22 VKLFTCSWIPQNQEPKA-LIFICHGYAMECSIGMNSTAIRLANE-GYACYGIDYQGHGKS 79
+KL +P+N K L I HG+ NE G A D GHGKS
Sbjct: 11 IKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKS 70
Query: 80 AGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMR-----YLLGESMGGAMVLLLHRKKP 134
G F+D F T+I + +K+ Y+ G S GG V+L +
Sbjct: 71 DG------KFED--HTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMER 122
Query: 135 DYFDGAVLVAPMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKE 194
D + ++P I E + L+ KF P ++I D E
Sbjct: 123 DIIKALIPLSPAAMIPEIARTGELL------GLKFDP-------ENIPD----------E 159
Query: 195 IRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFK 253
+ A + GR +LK Y + ++ +E+ +D+ + P +++HG++D+ SV K
Sbjct: 160 LDA----WDGR-KLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSK 213
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 13/119 (10%)
Query: 27 CSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYI 86
CSW P+ + +C +E + A+ LA +GY D GHG+S+ L +
Sbjct: 19 CSW----GSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLE-MV 73
Query: 87 DNFDDLVDDCFNHFTSICEK--EENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLV 143
++ L F + ++ +E ++ L+G SMG + + +P +LV
Sbjct: 74 TSYSSLT------FLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILV 126
>pdb|3E0X|A Chain A, The Crystal Structure Of A Lipase-Esterase Related Protein
From Clostridium Acetobutylicum Atcc 824
pdb|3E0X|B Chain B, The Crystal Structure Of A Lipase-Esterase Related Protein
From Clostridium Acetobutylicum Atcc 824
Length = 245
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 18/109 (16%)
Query: 30 IPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAG-----LSG 84
+ + P L+F+ HG C++ + + E Y C +D +GHG+S G + G
Sbjct: 10 VGNKKSPNTLLFV-HGSG--CNLKIFGELEKYL-EDYNCILLDLKGHGESKGQCPSTVYG 65
Query: 85 YIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKK 133
YIDN + + + + + + ++N L+G S GGA+VL + KK
Sbjct: 66 YIDNVANFITN-----SEVTKHQKNIT----LIGYSXGGAIVLGVALKK 105
>pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd)
From Rhodococcus Sp. Strain Rha1
Length = 285
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 43/206 (20%)
Query: 65 GYACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGA 124
G + Y Y GH + ++ + + NHF EK +++G SMGGA
Sbjct: 70 GQSEYPETYPGH-----IMSWVGMRVEQILGLMNHFG--IEKS-------HIVGNSMGGA 115
Query: 125 MVLLLHRKKPDYFDGAVLV----APMCKIAENVKPHPLVISVLTKLCKFIPTWKIIPSQD 180
+ L L + P+ FD L+ APM N +P L +L F ++ P ++
Sbjct: 116 VTLQLVVEAPERFDKVALMGSVGAPM-----NARP-----PELARLLAFYADPRLTPYRE 165
Query: 181 IVDVAFKLPEK---RKEIRANPYCYKGRPRLKTGYELMRVSMDLENRLDEVSIP------ 231
++ PE +EI + + P ++ E+M SM + ++ + IP
Sbjct: 166 LIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESM--KAGMESLVIPPATLGR 223
Query: 232 ----FIVLHGEEDKVTDKAVSVQLFK 253
+V HG +D++ S+ L K
Sbjct: 224 LPHDVLVFHGRQDRIVPLDTSLYLTK 249
>pdb|3BDI|A Chain A, Crystal Structure Of Predicted Cib-Like Hydrolase
(Np_393672.1) From Thermoplasma Acidophilum At 1.45 A
Resolution
Length = 207
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 55/142 (38%), Gaps = 23/142 (16%)
Query: 13 EEFI-LNSRRVKLFTCSWIPQNQEPKALIFICHGYAM------ECSIGMNSTAIRLANEG 65
EEFI +N RV F + + +F HGY+ + + N + I G
Sbjct: 6 EEFIDVNGTRV--FQRKXVTDSNRRSIALF--HGYSFTSXDWDKADLFNNYSKI-----G 56
Query: 66 YACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEK--EENKEKMRYLLGESMGG 123
Y Y DY G G+SA Y + DL H + N + G S GG
Sbjct: 57 YNVYAPDYPGFGRSASSEKYGIDRGDL-----KHAAEFIRDYLKANGVARSVIXGASXGG 111
Query: 124 AMVLLLHRKKPDYFDGAVLVAP 145
V+ + PD DG + VAP
Sbjct: 112 GXVIXTTLQYPDIVDGIIAVAP 133
>pdb|3PF8|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
pdb|3PF8|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
Length = 270
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 34 QEPKALIF----ICHGYAMECSIGM-NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDN 88
+EP I+ I HG+ + + A L +E A D+ GHG S G +
Sbjct: 39 EEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTV 98
Query: 89 FDDLVDDCFNHFTSICEKEENKEKMR--YLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM 146
+++ D +I + +R YL+G S GG + +L PD VL+AP
Sbjct: 99 LNEIEDA-----NAILNYVKTDPHVRNIYLVGHSQGGVVASMLAGLYPDLIKKVVLLAPA 153
Query: 147 CKI 149
+
Sbjct: 154 ATL 156
>pdb|3PF9|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant
pdb|3PFB|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFB|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFC|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Ferulic
Acid
pdb|3S2Z|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
pdb|3S2Z|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
Length = 270
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 34 QEPKALIF----ICHGYAMECSIGM-NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDN 88
+EP I+ I HG+ + + A L +E A D+ GHG S G +
Sbjct: 39 EEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTV 98
Query: 89 FDDLVDDCFNHFTSICEKEENKEKMR--YLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM 146
+++ D +I + +R YL+G + GG + +L PD VL+AP
Sbjct: 99 LNEIEDA-----NAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPA 153
Query: 147 CKI 149
+
Sbjct: 154 ATL 156
>pdb|3QM1|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate, Form Ii
Length = 265
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 34 QEPKALIF----ICHGYAMECSIGM-NSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDN 88
+EP I+ I HG+ + + A L +E A D+ GHG S G +
Sbjct: 39 EEPFGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTV 98
Query: 89 FDDLVDDCFNHFTSICEKEENKEKMR--YLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM 146
+++ D +I + +R YL+G + GG + +L PD VL+AP
Sbjct: 99 LNEIEDA-----NAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPA 153
Query: 147 CKI 149
+
Sbjct: 154 ATL 156
>pdb|1WOM|A Chain A, Crystal Structure Of Rsbq
pdb|1WOM|B Chain B, Crystal Structure Of Rsbq
pdb|1WPR|A Chain A, Crystal Structure Of Rsbq Inhibited By Pmsf
pdb|1WPR|B Chain B, Crystal Structure Of Rsbq Inhibited By Pmsf
Length = 271
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 105/254 (41%), Gaps = 16/254 (6%)
Query: 37 KALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQGHGKSAGLSGYIDNFDDLVDDC 96
KA I G+ + S+ N+ A E + DY G G S L Y N +D
Sbjct: 20 KASIMFAPGFGCDQSV-WNAVAPAF-EEDHRVILFDYVGSGHS-DLRAYDLNRYQTLDGY 76
Query: 97 FNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPM-CKIAENVKP 155
+CE + KE + +G S+G + +L ++P+ F V+V P C + + +
Sbjct: 77 AQDVLDVCEALDLKETV--FVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEY 134
Query: 156 H-----PLVISVLTKLCKFIPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPRLKT 210
+ ++ +L + K W + + +++ + PE ++E+ + +C P +
Sbjct: 135 YGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDR-PEIKEELESR-FC-STDPVIAR 191
Query: 211 GYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDKTMKLYEGMWH 270
+ D L +V++P ++L +D + V + + S ++K E H
Sbjct: 192 QFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPYS--SLKQMEARGH 249
Query: 271 GLLYGEPEENTQIV 284
P+E Q++
Sbjct: 250 CPHMSHPDETIQLI 263
>pdb|3LLC|A Chain A, Crystal Structure Of Putative Hydrolase (Yp_002548124.1)
From Agrobacterium Vitis S4 At 1.80 A Resolution
Length = 270
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 17/92 (18%)
Query: 62 ANEGYACYGIDYQGHGKSAGL--SGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGE 119
A+ G DY GHG S G G I + + +HF K + L+G
Sbjct: 63 ASLGVGAIRFDYSGHGASGGAFRDGTISRWLEEALAVLDHF---------KPEKAILVGS 113
Query: 120 SMGGAMVLLL------HRKKPDYFDGAVLVAP 145
S GG + L L P G VL+AP
Sbjct: 114 SXGGWIALRLIQELKARHDNPTQVSGXVLIAP 145
>pdb|2RAU|A Chain A, Crystal Structure Of A Putative Lipase (Np_343859.1) From
Sulfolobus Solfataricus At 1.85 A Resolution
Length = 354
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 22/85 (25%)
Query: 56 STAIRLANEGYACYGIDYQGH-------------GKSAGLSGYIDNFDDLVDDCFNHFTS 102
S + LA G+ Y IDY+ H + G S +I + ++V S
Sbjct: 84 SIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWISDIKEVV--------S 135
Query: 103 ICEKEENKEKMRYLLGESMGGAMVL 127
+++ +E++ YL GES GG L
Sbjct: 136 FIKRDSGQERI-YLAGESFGGIAAL 159
>pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide
Hydrolase B Complexed With An Inhibitor
Length = 362
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 16 ILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75
ILN R ++ + P +Q+ L+ + HG+ E LA GY ID +G
Sbjct: 13 ILNCRGTRIHAVADSPPDQQ-GPLVVLLHGFP-ESWYSWRHQIPALAGAGYRVVAIDQRG 70
Query: 76 HGKSA 80
+G+S+
Sbjct: 71 YGRSS 75
>pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938)
From Mycobacterium Tuberculosis At 2.1 Angstrom
Length = 356
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 16 ILNSRRVKLFTCSWIPQNQEPKALIFICHGYAMECSIGMNSTAIRLANEGYACYGIDYQG 75
ILN R ++ + P +Q+ L+ + HG+ E LA GY ID +G
Sbjct: 7 ILNCRGTRIHAVADSPPDQQ-GPLVVLLHGFP-ESWYSWRHQIPALAGAGYRVVAIDQRG 64
Query: 76 HGKSA 80
+G+S+
Sbjct: 65 YGRSS 69
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/219 (17%), Positives = 85/219 (38%), Gaps = 32/219 (14%)
Query: 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148
F VDDC + ++ + + +++ + G+S GG + A M K
Sbjct: 141 FPAAVDDCVAAYRALLKTAGSADRI-IIAGDSAGGGLT----------------TASMLK 183
Query: 149 IAENVKPHPLVISVLTKLCKF-IPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPR 207
E+ P P + +L+ + W + ++ D ++ A P
Sbjct: 184 AKEDGLPMPAGLVMLSPFVDLTLSRWS---NSNLAD---------RDFLAEPDTLGEMSE 231
Query: 208 LKTGYELMRVSMDLENRLDEVSIPFIVLH-GEEDKVTDKAVSVQLFKVASSSDKTMKLYE 266
L G E + + D +P +++H G E+ + + ++ A+ +K++
Sbjct: 232 LYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEALLSDSTTLAERAGAAGVSVELKIWP 291
Query: 267 GMWHGL-LYGEPEENTQIVFRDILNWLDERVATGNSRIE 304
M H +YG+ I ++I +W+ R++ + +E
Sbjct: 292 DMPHVFQMYGKFVNAADISIKEICHWISARISKLAAALE 330
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/219 (17%), Positives = 85/219 (38%), Gaps = 32/219 (14%)
Query: 89 FDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMVLLLHRKKPDYFDGAVLVAPMCK 148
F VDDC + ++ + + +++ + G+S GG + A M K
Sbjct: 127 FPAAVDDCVAAYRALLKTAGSADRI-IIAGDSAGGGLT----------------TASMLK 169
Query: 149 IAENVKPHPLVISVLTKLCKF-IPTWKIIPSQDIVDVAFKLPEKRKEIRANPYCYKGRPR 207
E+ P P + +L+ + W + ++ D ++ A P
Sbjct: 170 AKEDGLPMPAGLVMLSPFVDLTLSRWS---NSNLAD---------RDFLAEPDTLGEMSE 217
Query: 208 LKTGYELMRVSMDLENRLDEVSIPFIVLH-GEEDKVTDKAVSVQLFKVASSSDKTMKLYE 266
L G E + + D +P +++H G E+ + + ++ A+ +K++
Sbjct: 218 LYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEALLSDSTTLAERAGAAGVSVELKIWP 277
Query: 267 GMWHGL-LYGEPEENTQIVFRDILNWLDERVATGNSRIE 304
M H +YG+ I ++I +W+ R++ + +E
Sbjct: 278 DMPHVFQMYGKFVNAADISIKEICHWISARISKLAAALE 316
>pdb|1A8Q|A Chain A, Bromoperoxidase A1
Length = 274
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 220 DLENRLDEVSIPFIVLHGEEDKVTD-KAVSVQLFKVASSSDKTMKLYEGMWHG--LLYGE 276
D L + IP +V+HG++D+V A + ++ +++ +K+YEG HG ++ G+
Sbjct: 203 DFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQIIPNAE--LKVYEGSSHGIAMVPGD 260
Query: 277 PEENTQIVFRDILNWLDE 294
E+ RD+L +L++
Sbjct: 261 KEKFN----RDLLEFLNK 274
>pdb|4ETW|A Chain A, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
pdb|4ETW|C Chain C, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
Length = 264
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 208 LKTGYELMRVSMDLENRLDEVSIPFIVLHGEEDKVTDKAVSVQLFKVASSSDK 260
L G E+++ ++DL L VS+PF+ L+G D + + V L K+ S+
Sbjct: 176 LNGGLEILK-TVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSES 227
>pdb|4E9I|A Chain A, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|B Chain B, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|C Chain C, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4E9I|D Chain D, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma
Cruzi
pdb|4EM5|A Chain A, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|B Chain B, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|C Chain C, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
pdb|4EM5|D Chain D, Trypanosoma Cruzi Glucose-6-P Dehydrogenase In Complex
With G6p
Length = 541
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 67 ACYGIDYQGHGKSAGLSGYIDNFDDLVDDCFNHFTSICEKEENKEKMRYLLGESMGGAMV 126
AC I ++ +AG GY D+ + D NH T I EK R L E + V
Sbjct: 263 ACVQITFKEKIGTAGRGGYFDSIGIIRDVIQNHLTQILSL-LTMEKPRSLSAEDIRDEKV 321
Query: 127 LLLHRKKP 134
+L + P
Sbjct: 322 QVLRQVVP 329
>pdb|3H2H|A Chain A, Crystal Structure Of G231f Mutant Of The Rice Cell Wall
Degrading Esterase Lipa From Xanthomonas Oryzae
Length = 397
Score = 27.7 bits (60), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 59 IRLANEGYACYGIDYQGHGKS 79
RLA++GY G DY G GKS
Sbjct: 111 TRLASQGYVVVGSDYLGLGKS 131
>pdb|3H2I|A Chain A, Crystal Structure Of N228w Mutant Of The Rice Cell Wall
Degrading Esterase Lipa From Xanthomonas Oryzae
Length = 397
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 59 IRLANEGYACYGIDYQGHGKS 79
RLA++GY G DY G GKS
Sbjct: 111 TRLASQGYVVVGSDYLGLGKS 131
>pdb|3H2G|A Chain A, Crystal Structure Of A Rice Cell Wall Degrading Esterase
Lipa From Xanthomonas Oryzae
pdb|3H2J|A Chain A, Crystal Structure Of The Rice Cell Wall Degrading Esterase
Lipa From Xanthomonas Oryzae
pdb|3H2K|A Chain A, Crystal Structure Of A Ligand-Bound Form Of The Rice Cell
Wall Degrading Esterase Lipa From Xanthomonas Oryzae
Length = 397
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 59 IRLANEGYACYGIDYQGHGKS 79
RLA++GY G DY G GKS
Sbjct: 111 TRLASQGYVVVGSDYLGLGKS 131
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,898,096
Number of Sequences: 62578
Number of extensions: 412513
Number of successful extensions: 1021
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 991
Number of HSP's gapped (non-prelim): 45
length of query: 318
length of database: 14,973,337
effective HSP length: 99
effective length of query: 219
effective length of database: 8,778,115
effective search space: 1922407185
effective search space used: 1922407185
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)